Citrus Sinensis ID: 002314
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 937 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | yes | no | 0.987 | 0.981 | 0.783 | 0.0 | |
| Q9T079 | 795 | Probable alpha,alpha-treh | no | no | 0.832 | 0.981 | 0.605 | 0.0 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.763 | 0.869 | 0.661 | 0.0 | |
| Q9SHG0 | 783 | Probable alpha,alpha-treh | no | no | 0.823 | 0.985 | 0.574 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.706 | 0.903 | 0.424 | 1e-167 | |
| P40387 | 513 | Alpha,alpha-trehalose-pho | yes | no | 0.506 | 0.925 | 0.495 | 1e-135 | |
| Q00075 | 517 | Alpha,alpha-trehalose-pho | yes | no | 0.497 | 0.901 | 0.5 | 1e-135 | |
| Q00764 | 495 | Alpha,alpha-trehalose-pho | yes | no | 0.489 | 0.927 | 0.497 | 1e-133 | |
| O74932 | 469 | Alpha,alpha-trehalose-pho | yes | no | 0.486 | 0.972 | 0.505 | 1e-133 | |
| Q07158 | 488 | Alpha,alpha-trehalose-pho | yes | no | 0.484 | 0.930 | 0.515 | 1e-133 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1499 bits (3880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 740/945 (78%), Positives = 817/945 (86%), Gaps = 20/945 (2%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDG 60
MPGN YN +SS+IP R RL+R++ R+ RKS+RA +PNDV G E E++ RL +G
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVA--GSSENSENDLRL-EG 57
Query: 61 DNLGPSIVDEDLEGPASTPNEG--CERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLE 118
D+ V++ LEG A+ CER + R ++RQRLLVVANRLPVSA+RRGEDSWSLE
Sbjct: 58 DS-SRQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLE 116
Query: 119 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYY 178
ISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYY
Sbjct: 117 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYY 176
Query: 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCH 238
NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCH
Sbjct: 177 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCH 236
Query: 239 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDY 298
DYHLMFLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYDY
Sbjct: 237 DYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDY 296
Query: 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 358
ARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E
Sbjct: 297 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKE 356
Query: 359 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 418
FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+L
Sbjct: 357 RFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKL 416
Query: 419 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478
TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYE
Sbjct: 417 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYE 476
Query: 479 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538
FVACQ+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH H
Sbjct: 477 FVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRH 536
Query: 539 NFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 598
NF HV THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGF
Sbjct: 537 NFHHVKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGF 596
Query: 599 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658
NATLTEPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF
Sbjct: 597 NATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFG 656
Query: 659 EYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL 718
EY++WLAAENGMFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL
Sbjct: 657 EYDMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSL 716
Query: 719 VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILA 778
+WNYKYAD+EFGR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL
Sbjct: 717 IWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILG 776
Query: 779 EIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRP---TDAIKVPGE 835
EIVHSK M T IDYVLCIGHFLGKDEDVY FFEPELP D P I R+RP + A G+
Sbjct: 777 EIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGD 836
Query: 836 RRQALK-----------VASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSY 884
RR K +S +S + +QR Q+ K NH+ N R+PS +K S+
Sbjct: 837 RRPPSKSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKISW 896
Query: 885 NVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 929
NVLDL ENYFSCAVGR RTNAR+LL S D+VV FL+KLAD +SS
Sbjct: 897 NVLDLKGENYFSCAVGRTRTNARYLLGSPDDVVCFLEKLADTTSS 941
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q9T079|TPS4_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 OS=Arabidopsis thaliana GN=TPS4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/844 (60%), Positives = 623/844 (73%), Gaps = 64/844 (7%)
Query: 91 FSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEI 150
+R RLLVV+ LPV+A R GE+SWS +S GGLVSALLG+KEFE +WIGW GV+V D I
Sbjct: 1 MARPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAI 60
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ 210
G+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+FHYLG P E R T ++QSQ
Sbjct: 61 GKKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQ 119
Query: 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE 270
+ AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ LKEYNS MKVGWFLHTPFPSSE
Sbjct: 120 YEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSE 179
Query: 271 IHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 330
+++TLPSRSDLLR+VL ADLVGFHTYD+ARHF++AC ILG E T EG+ DQG++TRVA
Sbjct: 180 MYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAV 239
Query: 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390
FPIGI+ ERFI E++ V ++K+ + F GRK++LGVDRLD IKGIPQK AFEKFLE
Sbjct: 240 FPIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLE 299
Query: 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 450
EN++WRGKV+LLQIAVPTR + EYQ++ Q H VGRINGRFG++++VPI HLD S+DF
Sbjct: 300 ENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDF 359
Query: 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 510
LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGVLILSEFAGA QSLGAGAILVN
Sbjct: 360 NQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVN 419
Query: 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV---------SELND 561
PWNI EV++AI ALNMS EE+E++H NF +V TH+ Q+WA+ F+ S+L +
Sbjct: 420 PWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIE 479
Query: 562 TVVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREME 620
A+L L E D I++Y +SNNRLLILGF TLT+P+ RRGD M
Sbjct: 480 ITTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MN 536
Query: 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWM 680
L+LHP LK+ L LC DPKTT+VVLS S++ +LDKNF EYN+WLAAENGMFLR T+G+W+
Sbjct: 537 LELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYNMWLAAENGMFLRHTSGEWV 596
Query: 681 TTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740
T +PEH+N+EW+D +KHVF+YFTERTP S+ E E SLVWNY+ AD EFGR QARDMLQH
Sbjct: 597 TRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQH 656
Query: 741 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800
LW GPISNASV+VV+G +SVEV AVGVTKG+A++RIL EIVH+K M T IDYVLCIG FL
Sbjct: 657 LWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFL 716
Query: 801 GKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQ 860
GKDEDVY FFEPEL +K ++ + +
Sbjct: 717 GKDEDVYTFFEPEL---------------------------------TKKAKSLSSSGSD 743
Query: 861 APEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFL 920
+P+K S ++DL ENYFS A+G+ T AR+ L SSD+VV +
Sbjct: 744 SPKK-----------------VSSTIVDLKGENYFSVAIGQTHTKARYFLDSSDDVVKLI 786
Query: 921 KKLA 924
KL
Sbjct: 787 GKLC 790
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1030 bits (2663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/723 (66%), Positives = 602/723 (83%), Gaps = 8/723 (1%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIG 151
R RLLVVANRLPVSA R GE+SWSLE+S GGLVS LLG+ +F+ +W+GW GV+V DEI
Sbjct: 11 RPRLLVVANRLPVSAKRTGENSWSLEMSPGGLVSGLLGITSQFDTKWVGWPGVDVHDEIE 70
Query: 152 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
+ ALT++LAE +CIPVFL+ + QYYNGYCN ILWP+ H++GLPQED+ T ++F++Q+
Sbjct: 71 KNALTESLAEMKCIPVFLN-GVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQY 129
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
AY KAN+MF DV+ +Y++GD+VWCHDYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSE+
Sbjct: 130 DAYKKANRMFLDVIIDNYEEGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEV 189
Query: 272 HRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331
++TLPSRS+LLRA+LAADL+GFHTYD+ARHF+S CTRILG EGT EGV QGR+TRVA F
Sbjct: 190 YKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHEGVVYQGRVTRVAVF 249
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 391
PIGID +RFIR ++ V + ELQE FAG+KV+LGVDRLDMIKGIPQK LAFEKFLEE
Sbjct: 250 PIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAFEKFLEE 309
Query: 392 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451
N WR KVVL+QIAVPTR DVPEY++L SQVH +VGRINGRFG+++++PIHHLD S+DF
Sbjct: 310 NPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLDCSVDFN 369
Query: 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNP 511
LCA+YA+ DV LVTSLRDGMNLVSYEFVACQ+ KKGVL+LSEFAGA QSLG GA++VNP
Sbjct: 370 YLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEAKKGVLVLSEFAGAGQSLGVGALIVNP 429
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIK 571
W++TEV++AI ALNM EERE RH NF +V TH+A++W F+SELN + E++++++
Sbjct: 430 WDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWGLDFMSELNGIIPESEMQMR 489
Query: 572 QVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL 631
++P L E D I++Y +SNNRL+ILGF TL EP+++ +EM+LKL+P+LK L
Sbjct: 490 KIPLQLPEQDVIQQYSQSNNRLIILGFFGTLAEPMNS------GTKEMDLKLNPELKGTL 543
Query: 632 NALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEW 691
ALC+DPKTT+VVLS S +N+L+KNF E N+WLAAENGMF + TTG+W+T MP+++N++W
Sbjct: 544 KALCNDPKTTVVVLSRSGKNILNKNFGESNIWLAAENGMFEKQTTGEWVTNMPQNVNLDW 603
Query: 692 VDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASV 751
VD +K+VF+YFT+RTPRS+FE ETSLVWNY+YADVEFGR QARD+LQ+LW GPISNASV
Sbjct: 604 VDGVKNVFKYFTDRTPRSYFEASETSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASV 663
Query: 752 EVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811
+VV+G+ SVEV A+G TKGAAI RIL EIVH K M T ID+V C G+FL KDED+Y FFE
Sbjct: 664 DVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFE 723
Query: 812 PEL 814
++
Sbjct: 724 SKI 726
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SHG0|TPS3_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 OS=Arabidopsis thaliana GN=TPS3 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/844 (57%), Positives = 616/844 (72%), Gaps = 72/844 (8%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQ 152
RQ LLVVANRLP SA R GE SWSLE+S GG + L + +
Sbjct: 10 RQTLLVVANRLPASAKRTGEHSWSLEMSPGGKFNLL---------------------VEK 48
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
A++K+LAE +CIPVFL+E + QYYNGY N ILWP+ H++GLPQE T ++F++Q+
Sbjct: 49 DAVSKSLAEMKCIPVFLNE-VFDQYYNGYSNGILWPILHHMGLPQEYDHDTIKTFETQYD 107
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY KAN+MF DV+ ++YKDGD+VWC DYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSEI+
Sbjct: 108 AYKKANRMFLDVIKENYKDGDIVWCQDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEIY 167
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
+TLPSRS+LLR+VLAADL+ FHTYD+ARHFV+ CTRILG EGT EGV QGR+TRV P
Sbjct: 168 KTLPSRSELLRSVLAADLISFHTYDFARHFVNTCTRILGVEGTHEGVVYQGRVTRVVVLP 227
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
+GI RFI+ ++ V + EL++ F+G+KV+LGVDRLDMIKGIPQK L FEKFL+EN
Sbjct: 228 MGIYPNRFIKTCKLPEVIQQMNELKDRFSGKKVILGVDRLDMIKGIPQKYLGFEKFLDEN 287
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WR K+VL+QIAVPTR +VPEYQ+L +QVH +VGRINGRFG+++++PIHH+D S+D
Sbjct: 288 PNWRDKIVLVQIAVPTRNEVPEYQKLKNQVHRLVGRINGRFGSVSSLPIHHMDCSVDSNY 347
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
LCALYA++DV LVTSLRDG+NLVS+EFVACQ+ K+GVLILSEFAGA QSLGAGA+LVNPW
Sbjct: 348 LCALYAISDVMLVTSLRDGLNLVSHEFVACQEAKRGVLILSEFAGAGQSLGAGALLVNPW 407
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572
N+TEV++AI +ALNM EERE RH NF +V TH+A++W F+SELND E++L+I++
Sbjct: 408 NVTEVSSAIKKALNMPYEERETRHRVNFKYVKTHSAEKWGFDFLSELNDAFDESELQIRK 467
Query: 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN 632
+P L + D I+RY SNNRL+ILGF T+TEP R +EM+LKL+P+LK+ L
Sbjct: 468 IPHELPQQDVIQRYSLSNNRLIILGFYGTITEP------RNSLSKEMDLKLNPELKETLK 521
Query: 633 ALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWV 692
ALC+DPKTT+VVLS S +N+LDKNF EY +WLAAENGMFL+ TT +W+T MP+++N++WV
Sbjct: 522 ALCNDPKTTVVVLSRSGKNILDKNFGEYKIWLAAENGMFLKHTTEEWVTNMPQNMNLDWV 581
Query: 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752
D LK+VF+YFT+RTPRS FE +TSLVWNY+YADVEFGR QARD+LQ+LW GPISNAS E
Sbjct: 582 DGLKNVFKYFTDRTPRSFFEASKTSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASAE 641
Query: 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812
VV+G SVEV A+GVTK I IL EIVH K M T IDYV C G+FL KDED+Y FFE
Sbjct: 642 VVRGKYSVEVHAIGVTKEPEIGHILGEIVHKKAMTTPIDYVFCSGYFLEKDEDIYTFFES 701
Query: 813 ELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCT 872
E+ + K+ E R ++ K
Sbjct: 702 EIL-------------SPKLSHETRSKSSSSNHSLEK----------------------- 725
Query: 873 NVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSSHEA 932
K S NVLDL +ENYFS A+G+ RT AR+++ SS VV+ L KLA A+++ +
Sbjct: 726 --------KVSLNVLDLKQENYFSTAIGQARTKARYVVDSSHNVVNLLHKLAVANTTTTS 777
Query: 933 HNGP 936
P
Sbjct: 778 VKKP 781
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 588 bits (1515), Expect = e-167, Method: Compositional matrix adjust.
Identities = 303/714 (42%), Positives = 448/714 (62%), Gaps = 52/714 (7%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKA 154
RL+VV+NRLPVS + WS ++S+GGLV+AL G+K W+GW G + ++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWVGWIGAEIEEDDRKEI 75
Query: 155 LTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLPQEDRLATTRSFQSQFA 212
+ CIPVFL E + +++YNG+ N +LWPLFHYL L +DR+ +
Sbjct: 76 KELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLDYDDRI---------WN 126
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
+Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D ++G+FLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
R LP R ++L +L L+GFHTYDYARHF+ +CTRI+G E P GV + R +V FP
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPNGVYFKDRFVQVGVFP 246
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IKGIPQKL A E+ ++
Sbjct: 247 VGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQKY 306
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++ PIH+L +S+D
Sbjct: 307 PEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSE 366
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF GAAQSL +GA+++NPW
Sbjct: 367 LTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFTGAAQSL-SGAVMINPW 425
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN------DTVVEA 566
N EVA++I +L M PEERE++H +VT HTA W FV ELN D +V
Sbjct: 426 NTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFVKELNKASSNTDKMVTI 485
Query: 567 Q-LRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPG-RRGDQIREMELKLH 624
Q L I++V ++ Y +S RLLI ++ TL + P R Q
Sbjct: 486 QKLDIEKV---------VDIYKQSKRRLLIFAYDGTLIPYNNVPQLSRPSQ--------- 527
Query: 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC-TTGKWMTTM 683
+L + L +DPKT + +LSG D+ L + F + L+AE G F + + +W +
Sbjct: 528 -ELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLPESTEWEQQV 586
Query: 684 PEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWT 743
P +++ W ++++ +F+YFT RTP S FE++E W+Y+ AD FG IQAR++ HL
Sbjct: 587 PS-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARELHLHL-- 643
Query: 744 GPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797
N ++V+ G K++ VR+ + +++ +++ + + +D +L IG
Sbjct: 644 ---DNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI-----PKGLDLILLIG 689
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|P40387|TPS1_SCHPO Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tps1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 329/488 (67%), Gaps = 13/488 (2%)
Query: 77 STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA 136
S ++ + L G + +RL+VV+NRLP++ R+ ++ +S+GGLVSAL G+K+
Sbjct: 2 SDAHDTIKSLTGDASNSRRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMT 61
Query: 137 -RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
+W+GW G +P++ + + E IPVFLD++ ++YNG+ N+ILWPLFHY
Sbjct: 62 FQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH-- 119
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--- 252
P E + + AY AN FA+ + K+ +DGD++W DYHLM LP+ L+E
Sbjct: 120 PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGD 174
Query: 253 -NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 311
D+K+G+FLHTPFPSSEI+R LP R+++L VL DLVGFHTYDYARHF+SAC+RIL
Sbjct: 175 KFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILN 234
Query: 312 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371
P GVE G++ V FPIGID E+F AL+ + V+ I ++ G KV++GVDR
Sbjct: 235 LSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDR 294
Query: 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431
LD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING
Sbjct: 295 LDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRING 354
Query: 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491
RFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE++ Q + G LI
Sbjct: 355 RFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALI 414
Query: 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551
LSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE F +V +T+Q W
Sbjct: 415 LSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFW 473
Query: 552 AETFVSEL 559
++FV EL
Sbjct: 474 GQSFVGEL 481
|
Appears to have a role in spore germination. In S.pombe it appears to have no role in the control of the initial steps of glycolysis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00075|TPSA_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/480 (50%), Positives = 329/480 (68%), Gaps = 14/480 (2%)
Query: 86 LDGRTFSRQ-RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAG 143
L+ TF + RLL+V+NRLP++ R + + +S+GGLVS L G+ K +W GW G
Sbjct: 4 LENPTFQNEARLLLVSNRLPITIKRSDDGRYDFSMSSGGLVSGLSGLSKSTTFQWYGWPG 63
Query: 144 VNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 203
+ VP+E + E +PVF+D+++ ++YNG+ N+ILWPLFHY P E
Sbjct: 64 LEVPEEEIPVVKERLKQEYNAVPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD- 120
Query: 204 TRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD----MKVG 259
+S + AY +AN++FA V K +DGD++W HDYHLM LP+ L+E D +K+G
Sbjct: 121 ----ESAWEAYKEANRLFAKAVAKEVQDGDLIWVHDYHLMLLPEMLREEIGDSKENVKIG 176
Query: 260 WFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGV 319
+FLHTPFPSSEI+R LP R++LL VL DL+GFHTYDY RHF+SAC+R+LG TP G+
Sbjct: 177 FFLHTPFPSSEIYRILPVRNELLLGVLHCDLIGFHTYDYTRHFLSACSRLLGLTTTPNGI 236
Query: 320 EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379
E QG++ AFPIGID E+F L+ VQ I L++ F G K+M+GVDRLD IKG+P
Sbjct: 237 EFQGKIIACGAFPIGIDPEKFEEGLKKEKVQKRIAMLEQKFQGVKLMVGVDRLDYIKGVP 296
Query: 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439
QKL A E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +
Sbjct: 297 QKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFM 356
Query: 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA 499
PIH L +S++F L ALYAV+D +V+S RDGMNLV+YE++A Q + GVL+LSEFAGAA
Sbjct: 357 PIHFLHKSVNFDELIALYAVSDACIVSSTRDGMNLVAYEYIATQKKRHGVLVLSEFAGAA 416
Query: 500 QSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
QSL G+I++NPWN E+A A A+ MS E+R +V +T+ W ++FV+EL
Sbjct: 417 QSLN-GSIIINPWNTEELAGAYQEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL 475
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00764|TPS1_YEAST Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/476 (49%), Positives = 329/476 (69%), Gaps = 17/476 (3%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDE 149
S ++VV+NRLPV+ + + +S+GGLV+AL G+K+ + +W GW G+ +PD+
Sbjct: 14 SGGNIIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFKWFGWPGLEIPDD 73
Query: 150 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ L + +P+FL ++I +YNG+ N+ILWPLFHY P E ++
Sbjct: 74 EKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PGEINFD-----EN 126
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-----EYNSDMKVGWFLHT 264
+ AY +ANQ F + + K D++W HDYHLM +P+ L+ + ++KVGWFLHT
Sbjct: 127 AWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHT 186
Query: 265 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 324
PFPSSEI+R LP R ++L+ VL+ DLVGFHTYDYARHF+S+ R+L P GVE QGR
Sbjct: 187 PFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNGVEYQGR 246
Query: 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384
V AFPIGID ++F L+ VQ I++L+ETF G K+++GVDRLD IKG+PQKL A
Sbjct: 247 FVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHA 306
Query: 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444
E FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT+ VPIH +
Sbjct: 307 MEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFM 366
Query: 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA 504
+S+ F L +LYAV+DV LV+S RDGMNLVSYE++ACQ+ KKG LILSEF GAAQSL
Sbjct: 367 HKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLN- 425
Query: 505 GAILVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSEL 559
GAI+VNPWN ++++AI AL + P+ +++ +W + +++ +T+ W E FV EL
Sbjct: 426 GAIIVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLYKYISKYTSAFWGENFVHEL 480
|
Synthase catalytic subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. Can function independently of the complex. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O74932|TPS1_YARLI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/471 (50%), Positives = 322/471 (68%), Gaps = 15/471 (3%)
Query: 96 LLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA-RWIGWAGVNVPDEIGQKA 154
+LV++NRLPV+ R + ++ +S+GGLV+AL G+K+ +W GW G+ +P++ +
Sbjct: 4 VLVISNRLPVTISREEDGTYKYTMSSGGLVTALSGLKQSTTFQWFGWPGLEIPEKDKPRL 63
Query: 155 LTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY 214
+ C+PVF+D+D+ +YNG+ N+ILWPLFHY P E Q + AY
Sbjct: 64 INDLETMFSCVPVFMDDDLADLHYNGFSNSILWPLFHYH--PGEMNFD-----QVAWEAY 116
Query: 215 IKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD------MKVGWFLHTPFPS 268
+AN++FA V K GD+VW HDYHLM LP+ L+E + +K+G+FLHTPFPS
Sbjct: 117 TQANRLFAKKVASIVKPGDIVWVHDYHLMLLPEMLREECENNSALDGLKIGFFLHTPFPS 176
Query: 269 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
SEI+R LP R ++L VL+ +L+GFHTYDYARHF+S+ +RIL E P G +GR V
Sbjct: 177 SEIYRILPVRKEVLTGVLSCNLIGFHTYDYARHFLSSVSRILDLETMPNGTYYKGRHVVV 236
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID +F+ + VQ I +LQ+ F G KV++GVDRLD IKG+PQKL AFE F
Sbjct: 237 GAFPIGIDVNKFLEGCKRPAVQERIAQLQDKFKGIKVVVGVDRLDYIKGVPQKLHAFEVF 296
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L E+ +W GKVVL+Q+AVP+R V EYQ L + V+E+VGRING FGT+ PIH + RS+
Sbjct: 297 LSEHPEWIGKVVLVQVAVPSRGLVEEYQNLRAVVNELVGRINGMFGTVEFTPIHFMHRSV 356
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
DF L ALY+++DV V+S RDGMNLVSYE+VACQ K G LILSEF GAAQSL GA++
Sbjct: 357 DFNELIALYSISDVCFVSSTRDGMNLVSYEYVACQTEKHGSLILSEFTGAAQSLN-GALI 415
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
VNPWN ++A A+ +L SPE++ + H F +V+ +T+Q W E FVSEL
Sbjct: 416 VNPWNTEDMAEALYDSLTFSPEKKAENHRKLFKYVSKYTSQHWGEAFVSEL 466
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q07158|TPS1_KLULA Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TPS1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/473 (51%), Positives = 325/473 (68%), Gaps = 19/473 (4%)
Query: 96 LLVVANRLPVSAIRRGEDSWSLE--ISAGGLVSALLGVKEFEA-RWIGWAGVNVPDEIGQ 152
++V++NRLPV+ I++ E + E +S+GGLV+AL G+K+ +W GW G+ VPDE
Sbjct: 18 VIVISNRLPVT-IKKDEKTGEYEYSMSSGGLVTALQGLKKSTTFQWYGWPGLEVPDEDKA 76
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
K + L + IP+FL +++ +YNG+ N+ILWPLFHY P E T +
Sbjct: 77 KVKRELLEKFNAIPIFLSDEVADLHYNGFSNSILWPLFHYH--PGEITFDDT-----AWL 129
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFP 267
AY +AN FAD + + D DVVW HDYHLM LP+ +++ ++K+GWFLHTPFP
Sbjct: 130 AYNEANMAFADEIEGNINDNDVVWVHDYHLMLLPEMIRQRVIAKKLKNIKIGWFLHTPFP 189
Query: 268 SSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTR 327
SSEI+R LP R ++L+ VL+ DL+GFHTYDYARHF+SA RIL P GVE GR
Sbjct: 190 SSEIYRILPVRQEILKGVLSCDLIGFHTYDYARHFLSAVQRILNVNTLPNGVEFDGRFVN 249
Query: 328 VAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387
V AFPIGID E F L+ + V IKEL+E+F G K+++GVDRLD IKG+PQKL A E
Sbjct: 250 VGAFPIGIDVETFTEGLKQDAVIKRIKELKESFKGCKIIIGVDRLDYIKGVPQKLHALEV 309
Query: 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447
FL + +W GKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT VPIH + RS
Sbjct: 310 FLGAHPEWIGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTAEFVPIHFMHRS 369
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
+ F L +LYAV+DV LV+S RDGMNLVSYE+++CQ+ KKG LILSEF GAAQSL GA+
Sbjct: 370 IPFQELISLYAVSDVCLVSSTRDGMNLVSYEYISCQEEKKGTLILSEFTGAAQSLN-GAL 428
Query: 508 LVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSEL 559
+VNPWN ++A +I AL + PEE+ +W + +++ +T+ W E FV EL
Sbjct: 429 IVNPWNTDDLAESINEALTV-PEEKRAANWEKLYKYISKYTSAFWGENFVHEL 480
|
Appears to play a role in controlling and restricting the influx of sugar into glycolysis, probably at the level of hexokinase. Necessary for trehalose-6-phosphate synthase and phosphatase activities. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 937 | ||||||
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.987 | 0.981 | 0.765 | 0.0 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.767 | 0.904 | 0.646 | 1.9e-267 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.718 | 0.918 | 0.420 | 1e-146 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.519 | 0.561 | 0.360 | 3.1e-122 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.469 | 0.511 | 0.374 | 3.1e-120 | |
| UNIPROTKB|G4NHF4 | 529 | MGG_03860 "Alpha,alpha-trehalo | 0.487 | 0.863 | 0.5 | 2e-118 | |
| POMBASE|SPAC328.03 | 513 | tps1 "alpha,alpha-trehalose-ph | 0.506 | 0.925 | 0.481 | 2.6e-118 | |
| ASPGD|ASPL0000027021 | 504 | tpsA [Emericella nidulans (tax | 0.505 | 0.940 | 0.484 | 1.1e-117 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.487 | 0.923 | 0.489 | 1.1e-117 | |
| CGD|CAL0004028 | 478 | TPS1 [Candida albicans (taxid: | 0.498 | 0.976 | 0.486 | 2.1e-116 |
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3709 (1310.7 bits), Expect = 0., P = 0.
Identities = 723/945 (76%), Positives = 797/945 (84%)
Query: 1 MPGXXXXXXXXXIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDG 60
MPG IP R RL+R++ R+ RKS+RA +PNDV G E E++ RL +G
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVA--GSSENSENDLRL-EG 57
Query: 61 DNLGPSIVDEDLEGPASTP--NEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLE 118
D+ V++ LEG A+ ++ CER + R ++RQRLLVVANRLPVSA+RRGEDSWSLE
Sbjct: 58 DS-SRQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLE 116
Query: 119 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYY 178
ISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYY
Sbjct: 117 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYY 176
Query: 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCH 238
NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCH
Sbjct: 177 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCH 236
Query: 239 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDY 298
DYHLMFLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLP GFHTYDY
Sbjct: 237 DYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDY 296
Query: 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 358
ARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E
Sbjct: 297 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKE 356
Query: 359 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 418
FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+L
Sbjct: 357 RFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKL 416
Query: 419 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478
TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYE
Sbjct: 417 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYE 476
Query: 479 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538
FVACQ+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH H
Sbjct: 477 FVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRH 536
Query: 539 NFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 598
NF HV THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGF
Sbjct: 537 NFHHVKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGF 596
Query: 599 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658
NATLTEPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF
Sbjct: 597 NATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFG 656
Query: 659 EYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL 718
EY++WLAAENGMFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL
Sbjct: 657 EYDMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSL 716
Query: 719 VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILA 778
+WNYKYAD+EFGR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL
Sbjct: 717 IWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILG 776
Query: 779 EIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTD---AIKVPGE 835
EIVHSK M T IDYVLCIGHFLGKDEDVY FFEPELP D P I R+RP+ A G+
Sbjct: 777 EIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGD 836
Query: 836 RRQALKVA---SRGSSKISQGK--------TQRPAQAPEKKTPNHNCTNVRQPSSDKTSY 884
RR K ++ SK S +QR Q+ K NH+ N R+PS +K S+
Sbjct: 837 RRPPSKSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKISW 896
Query: 885 NVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 929
NVLDL ENYFSCAVGR RTNAR+LL S D+VV FL+KLAD +SS
Sbjct: 897 NVLDLKGENYFSCAVGRTRTNARYLLGSPDDVVCFLEKLADTTSS 941
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2480 (878.1 bits), Expect = 1.9e-267, Sum P(2) = 1.9e-267
Identities = 474/733 (64%), Positives = 571/733 (77%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIG 151
+R RLLVV+ LPV+A R GE+SWS +S GGLVSALLG+KEFE +WIGW GV+V D IG
Sbjct: 2 ARPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAIG 61
Query: 152 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+FHYLG P E R T ++QSQ+
Sbjct: 62 KKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQY 120
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ LKEYNS MKVGWFLHTPFPSSE+
Sbjct: 121 EAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSEM 180
Query: 272 HRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331
++TLP GFHTYD+ARHF++AC ILG E T EG+ DQG++TRVA F
Sbjct: 181 YKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAVF 240
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 391
PIGI+ ERFI E++ V ++K+ + F GRK++LGVDRLD IKGIPQK AFEKFLEE
Sbjct: 241 PIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLEE 300
Query: 392 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451
N++WRGKV+LLQIAVPTR + EYQ++ Q H VGRINGRFG++++VPI HLD S+DF
Sbjct: 301 NAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDFN 360
Query: 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNP 511
LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGVLILSEFAGA QSLGAGAILVNP
Sbjct: 361 QLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVNP 420
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV---------SELNDT 562
WNI EV++AI ALNMS EE+E++H NF +V TH+ Q+WA+ F+ S+L +
Sbjct: 421 WNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIEI 480
Query: 563 VVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMEL 621
A+L L E D I++Y +SNNRLLILGF TLT+P+ RRGD M L
Sbjct: 481 TTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MNL 537
Query: 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMT 681
+LHP LK+ L LC DPKTT+VVLS S++ +LDKNF EYN+WLAAENGMFLR T+G+W+T
Sbjct: 538 ELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYNMWLAAENGMFLRHTSGEWVT 597
Query: 682 TMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHL 741
+PEH+N+EW+D +KHVF+YFTERTP S+ E E SLVWNY+ AD EFGR QARDMLQHL
Sbjct: 598 RIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQHL 657
Query: 742 WTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG 801
W GPISNASV+VV+G +SVEV AVGVTKG+A++RIL EIVH+K M T IDYVLCIG FLG
Sbjct: 658 WAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFLG 717
Query: 802 KDEDVYAFFEPEL 814
KDEDVY FFEPEL
Sbjct: 718 KDEDVYTFFEPEL 730
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 295/701 (42%), Positives = 425/701 (60%)
Query: 80 NEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWI 139
NE L+ T RL+VV+NRLPVS + WS ++S+GGLV+AL G+K W+
Sbjct: 2 NENDNNLENETGFSGRLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWV 60
Query: 140 GWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLP 196
GW G + +E +K + + L + CIPVFL E + +++YNG+ N +LWPLFHYL L
Sbjct: 61 GWIGAEI-EEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLD 119
Query: 197 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDM 256
+DR+ + +Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D
Sbjct: 120 YDDRI---------WNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDA 170
Query: 257 KVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTP 316
++G+FLH PFPSSEI R LP GFHTYDYARHF+ +CTRI+G E P
Sbjct: 171 RIGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAP 230
Query: 317 EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376
GV + R +V FP+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IK
Sbjct: 231 NGVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIK 290
Query: 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436
GIPQKL A E+ ++ +W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++
Sbjct: 291 GIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSI 350
Query: 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496
PIH+L +S+D L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF
Sbjct: 351 GYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFT 410
Query: 497 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556
GAAQSL +GA+++NPWN EVA++I +L M PEERE++H +VT HTA W FV
Sbjct: 411 GAAQSL-SGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 557 SELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQI 616
ELN + + + ++ Y +S RLLI ++ TL + P Q+
Sbjct: 470 KELNKASSNTDKMVTIQKLDIEKV--VDIYKQSKRRLLIFAYDGTLIPYNNVP-----QL 522
Query: 617 REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTT 676
+L + L +DPKT + +LSG D+ L + F + L+AE G F +
Sbjct: 523 SRPS----QELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLPE 578
Query: 677 G-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735
+W +P +++ W ++++ +F+YFT RTP S FE++E W+Y+ AD FG IQAR
Sbjct: 579 STEWEQQVPS-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQAR 637
Query: 736 DMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRI 776
++ HL P+ + G +S + + K D I
Sbjct: 638 ELHLHLDNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI 678
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 794 (284.6 bits), Expect = 3.1e-122, Sum P(3) = 3.1e-122
Identities = 187/519 (36%), Positives = 284/519 (54%)
Query: 65 PSIVDEDLEGPASTPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDS-WSLEISAGG 123
P I+ E L+G S +G ++ SR+R ++VAN LP+ A R E W
Sbjct: 34 PGIISE-LDGGYS---DGSSDVNSSNSSRERKIIVANMLPLQAKRDTETGQWCFSWDEDS 89
Query: 124 LVSALL-GVK-EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGY 181
L+ L G + E +IG ++ ++ K L + C+P FL +++ ++Y G+
Sbjct: 90 LLLQLRDGFSSDTEFVYIGSLNADIGISEQEEVSHKLLLDFNCVPTFLPKEMQEKFYLGF 149
Query: 182 CNNILWPLFHYLGLPQ-EDRLATTRSFQSQFAAYIKANQMFAD-VVNKHYKDGDVVWCHD 239
C + LWPLFHY+ LP D R + + AY+ AN++F+D V+ + D VW HD
Sbjct: 150 CKHHLWPLFHYM-LPMFPDH--GDRFDRRLWQAYVSANKIFSDRVMEVINPEEDYVWIHD 206
Query: 240 YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYA 299
YHLM LP L++ + +K+G+FLH+PFPSSEI+RTLP GFHT+DYA
Sbjct: 207 YHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDDLLRGLLNCDLIGFHTFDYA 266
Query: 300 RHFVSACTRILGFEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 355
RHF+S C+R+LG + + G++ GR + P+GI R L + +KE
Sbjct: 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLPSTAAKMKE 326
Query: 356 LQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY 415
+QE F G+K++LGVD +D+ KGI KL+A E+ E RGK+VL+QI P R +
Sbjct: 327 IQEQFKGKKLILGVDDMDIFKGISLKLIAMERLFETYWHMRGKLVLIQIVNPARATGKDV 386
Query: 416 QRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLV 475
+ + + RIN R+G+ P+ +DR + A YA+ D LV ++RDGMNLV
Sbjct: 387 EEAKKETYSTAKRINERYGSAGYQPVILIDRLVPRYEKTAYYAMADCCLVNAVRDGMNLV 446
Query: 476 SYEFVACQ------DLKKGV---------LILSEFAGAAQSLGAGAILVNPWNITEVANA 520
Y+++ C+ D G+ L++SEF G + SL +GAI VNPW++ VA A
Sbjct: 447 PYKYIICRQGTPGMDKAMGISHDSARTSMLVVSEFIGCSPSL-SGAIRVNPWDVDAVAEA 505
Query: 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
+ AL M E+ RH ++ +V+TH WA++F+ +L
Sbjct: 506 VNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFMQDL 544
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 769 (275.8 bits), Expect = 3.1e-120, Sum P(3) = 3.1e-120
Identities = 177/473 (37%), Positives = 268/473 (56%)
Query: 115 WSLEISAGGLVSAL---LGVKEFEARWIGWAGVNVP-DEIGQKALTKALAEK-RCIPVFL 169
W+ L+ L LG + E ++G +P +E Q+ + + L E +C+P FL
Sbjct: 88 WNFSWDENSLLLQLKDGLGDEAIEVIYVGCLKEEIPLNE--QEEVYQILLESFKCVPTFL 145
Query: 170 DEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFAD-VVNKH 228
D+ +YY+G+C LWPLFHY+ LP L R ++ + AY+ N++FAD ++
Sbjct: 146 PLDLYTRYYHGFCKQQLWPLFHYM-LPLSPDLGG-RFDRTLWQAYVSVNKIFADRIMEVI 203
Query: 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXX 288
+ D VW HDYHLM LP L++ + +K+G+FLH+PFPSSEI++TLP
Sbjct: 204 NPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNS 263
Query: 289 XXXGFHTYDYARHFVSACTRILG--FEGTPE--GVEDQGRLTRVAAFPIGIDSERFIRAL 344
GFHT+DYARHF+S C+R+LG +E G+E GR + P+GI + L
Sbjct: 264 DLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVL 323
Query: 345 EINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402
+ + + EL E + GR ++LGVD +D+ KGI KLLA E+ L ++ +W+GKVVL+
Sbjct: 324 SLPETERKVGELIERYGRKGRTMLLGVDDMDIFKGITLKLLAMEQLLMQHPEWQGKVVLV 383
Query: 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462
QIA P R + + + ++ + V RIN FG PI +D L F A Y V +
Sbjct: 384 QIANPARGKGKDVKEMQAETYSTVKRINETFGRPGYDPIVLIDAPLKFYERVAYYVVAEC 443
Query: 463 ALVTSLRDGMNLVSYEFVACQD----L------------KKGVLILSEFAGAAQSLGAGA 506
LVT++RDGMNL+ YE++ + L KK +L++SEF G + SL +GA
Sbjct: 444 CLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKLEANNRNKKSMLVVSEFIGCSPSL-SGA 502
Query: 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
I VNPWN+ VA+A+ AL ++ E++ RH ++ +V+TH WA +F+ +L
Sbjct: 503 IRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYVSTHDVGYWARSFLQDL 555
|
|
| UNIPROTKB|G4NHF4 MGG_03860 "Alpha,alpha-trehalose-phosphate synthase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 236/472 (50%), Positives = 318/472 (67%)
Query: 95 RLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQ 152
RLL+++NRLP++ I+R +D +S +S+GGLV+ L G+ K +W GW G+ VPD
Sbjct: 15 RLLLISNRLPIT-IKRSDDGQYSFSMSSGGLVTGLSGLAKTTSFQWYGWPGLEVPDAEAG 73
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
+ + E PVF+D+++ ++YNG+ N+ILWPLFHY P E +S ++
Sbjct: 74 PVVQRLKNEYGAHPVFVDDELADRHYNGFANSILWPLFHYH--PGEITFD-----ESAWS 126
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD----MKVGWFLHTPFPS 268
AY + N++FA V K +DGD++W HDYHLM LP+ L+E D +K+G+FLHTPFPS
Sbjct: 127 AYKEVNRLFAQTVVKDVQDGDMIWVHDYHLMLLPEMLREEIGDSKKNVKIGFFLHTPFPS 186
Query: 269 SEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
SEI+R LP GFHTYDYARHF+S+C+RIL TP GV+ GR V
Sbjct: 187 SEIYRILPVRQALLQGVLHCDLLGFHTYDYARHFLSSCSRILSAPTTPNGVQFAGRFVTV 246
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID E+F+ L+ VQ I L F G K+++GVDRLD IKG+PQKL A E F
Sbjct: 247 GAFPIGIDPEKFVEGLQKPKVQQRIAALTRKFEGVKLIVGVDRLDYIKGVPQKLHALEVF 306
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L E+ +W GK+VL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +PIH L +S+
Sbjct: 307 LTEHPEWIGKIVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTIEFMPIHFLHQSV 366
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L ALYAV+DV LV+S RDGMNLVSYE++A Q + GV+ILSEF GAAQSL +G+++
Sbjct: 367 SFDELAALYAVSDVCLVSSTRDGMNLVSYEYIATQRDRHGVMILSEFTGAAQSL-SGSLI 425
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560
VNPWN E+ANAI A+ M PE+RE +V +T+ W +FV+ELN
Sbjct: 426 VNPWNTEELANAIHDAVTMGPEQREANFKKLERYVFKYTSAWWGSSFVAELN 477
|
|
| POMBASE|SPAC328.03 tps1 "alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 235/488 (48%), Positives = 319/488 (65%)
Query: 77 STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA 136
S ++ + L G + +RL+VV+NRLP++ R+ ++ +S+GGLVSAL G+K+
Sbjct: 2 SDAHDTIKSLTGDASNSRRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMT 61
Query: 137 -RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
+W+GW G +P++ + + E IPVFLD++ ++YNG+ N+ILWPLFHY
Sbjct: 62 FQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH-- 119
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD 255
P E + + AY AN FA+ + K+ +DGD++W DYHLM LP+ L+E D
Sbjct: 120 PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGD 174
Query: 256 ----MKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILG 311
+K+G+FLHTPFPSSEI+R LP GFHTYDYARHF+SAC+RIL
Sbjct: 175 KFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILN 234
Query: 312 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371
P GVE G++ V FPIGID E+F AL+ + V+ I ++ G KV++GVDR
Sbjct: 235 LSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDR 294
Query: 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431
LD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING
Sbjct: 295 LDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRING 354
Query: 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491
RFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE++ Q + G LI
Sbjct: 355 RFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALI 414
Query: 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551
LSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE F +V +T+Q W
Sbjct: 415 LSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFW 473
Query: 552 AETFVSEL 559
++FV EL
Sbjct: 474 GQSFVGEL 481
|
|
| ASPGD|ASPL0000027021 tpsA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 238/491 (48%), Positives = 326/491 (66%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE 149
+ RLL+V+NRLP++ I+R ED + +S+GGLVS L G+ K +W GW G+ VP+E
Sbjct: 10 NESRLLLVSNRLPIT-IKRSEDGKYDFSMSSGGLVSGLSGLSKTTTFQWYGWPGLEVPEE 68
Query: 150 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ E IPVF+D+++ ++YNG+ N+ILWPLFHY P E +S
Sbjct: 69 EIPTLKNRLKEEYNAIPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD-----ES 121
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--NS--DMKVGWFLHTP 265
+ AY +AN++FA V +DGD++W HDYHLM LP+ L+E N+ ++K+G+FLHTP
Sbjct: 122 AWEAYKEANRLFAQAVASQVQDGDLIWVHDYHLMLLPEMLREEIGNTKKNIKIGFFLHTP 181
Query: 266 FPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL 325
FPSSEI+R LP GFHTYDY RHF+SAC+R+LG TP G+E QG++
Sbjct: 182 FPSSEIYRILPVRNELLLGLLHCDLIGFHTYDYTRHFLSACSRLLGLPTTPNGIEFQGKI 241
Query: 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAF 385
AFPIGID E+F L+ VQ I L++ F G K+M+GVDRLD IKG+PQKL A
Sbjct: 242 IACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKFQGVKLMVGVDRLDYIKGVPQKLHAL 301
Query: 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445
E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +PIH L
Sbjct: 302 EVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLH 361
Query: 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG 505
+S++F L ALYAV+D +V+S RDGMNLVSYE++A Q+ + G L+LSEFAGAAQSL G
Sbjct: 362 KSVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQEKRHGSLVLSEFAGAAQSLN-G 420
Query: 506 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565
+I+VNPWN E+A A A+ MS E+R +V +T+ W ++FV+EL +
Sbjct: 421 SIIVNPWNTEELAAAYHEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTELTRISEQ 480
Query: 566 A--QLRIKQVP 574
A +L K+ P
Sbjct: 481 AAGKLPTKETP 491
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 233/476 (48%), Positives = 321/476 (67%)
Query: 96 LLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEIGQK 153
++VV+NRLPV+ + + +S+GGLV+AL G+K+ + +W GW G+ +PD+ +
Sbjct: 18 IIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFKWFGWPGLEIPDD-EKD 76
Query: 154 ALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
+ K L EK +P+FL ++I +YNG+ N+ILWPLFHY P E ++ +
Sbjct: 77 QVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PGEINFD-----ENAWL 129
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-----EYNSDMKVGWFLHTPFP 267
AY +ANQ F + + K D++W HDYHLM +P+ L+ + ++KVGWFLHTPFP
Sbjct: 130 AYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHTPFP 189
Query: 268 SSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTR 327
SSEI+R LP GFHTYDYARHF+S+ R+L P GVE QGR
Sbjct: 190 SSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNGVEYQGRFVN 249
Query: 328 VAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387
V AFPIGID ++F L+ VQ I++L+ETF G K+++GVDRLD IKG+PQKL A E
Sbjct: 250 VGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHAMEV 309
Query: 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447
FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT+ VPIH + +S
Sbjct: 310 FLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFMHKS 369
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
+ F L +LYAV+DV LV+S RDGMNLVSYE++ACQ+ KKG LILSEF GAAQSL GAI
Sbjct: 370 IPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLN-GAI 428
Query: 508 LVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSELNDT 562
+VNPWN ++++AI AL + P+ +++ +W + +++ +T+ W E FV EL T
Sbjct: 429 IVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLYKYISKYTSAFWGENFVHELYST 483
|
|
| CGD|CAL0004028 TPS1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 234/481 (48%), Positives = 320/481 (66%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY----NSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SYM4 | TPS1_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7830 | 0.9871 | 0.9819 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_1680018 | hypothetical protein (922 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| estExt_fgenesh4_pg.C_LG_III0902 | hypothetical protein (662 aa) | • | 0.702 | ||||||||
| PtpRR9 | pseudo response regulator (541 aa) | • | 0.683 | ||||||||
| fgenesh4_pg.C_scaffold_122000043 | hypothetical protein (472 aa) | • | 0.683 | ||||||||
| estExt_fgenesh4_pm.C_LG_VI0700 | hypothetical protein (664 aa) | • | 0.683 | ||||||||
| estExt_fgenesh4_pg.C_LG_X0958 | hypothetical protein (587 aa) | • | 0.683 | ||||||||
| gw1.XII.661.1 | hypothetical protein (269 aa) | • | • | • | 0.581 | ||||||
| gw1.XV.542.1 | hypothetical protein (267 aa) | • | • | • | 0.580 | ||||||
| gw1.II.1542.1 | hypothetical protein (305 aa) | • | • | 0.514 | |||||||
| estExt_fgenesh4_pg.C_LG_V1131 | hypothetical protein (1171 aa) | • | 0.510 | ||||||||
| estExt_Genewise1_v1.C_LG_XIV1950 | hypothetical protein (750 aa) | • | 0.510 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 937 | |||
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 0.0 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 0.0 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 1e-146 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 2e-85 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 2e-81 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 8e-72 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 1e-25 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 9e-12 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 2e-06 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 4e-06 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 6e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 0.001 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1833 bits (4750), Expect = 0.0
Identities = 764/935 (81%), Positives = 831/935 (88%), Gaps = 9/935 (0%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRD 59
MPGN YN SS P RV RL+RE R+LRKS R+S+ ND D N G E FE++ RL +
Sbjct: 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSE 57
Query: 60 GDNLGPSIVDEDLEGPA--STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSL 117
GDN S V++ LEG A S +GCER +GR RQRLLVVANRLPVSA+RRGEDSWSL
Sbjct: 58 GDNDSSSHVEQLLEGAAAESALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSL 117
Query: 118 EISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQY 177
EISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKALTKALAEKRCIPVFLDE+IVHQY
Sbjct: 118 EISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQY 177
Query: 178 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237
YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWC
Sbjct: 178 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237
Query: 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYD 297
HDYHLMFLPKCLKEYNS+MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYD
Sbjct: 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYD 297
Query: 298 YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQ 357
YARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE VQ HIKEL+
Sbjct: 298 YARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELK 357
Query: 358 ETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 417
E FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN +WR KVVLLQIAVPTRTDVPEYQ+
Sbjct: 358 ERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQK 417
Query: 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477
LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSY
Sbjct: 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477
Query: 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537
EFVACQD KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +IA+ALNM EEREKRH
Sbjct: 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHR 537
Query: 538 HNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILG 597
HNF HVTTHTAQEWAETFVSELNDTVVEAQLR +QVPP L D+I+RYL+SNNRLLILG
Sbjct: 538 HNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILG 597
Query: 598 FNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657
FNATLTEPVDTPGRRGDQI+EMEL+LHP+LK+PL ALC DPKTTIVVLSGSDR+VLD+NF
Sbjct: 598 FNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENF 657
Query: 658 QEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717
E+++WLAAENGMFLR T G+WMTTMPEHLNM+WVDS+KHVFEYFTERTPRSHFE RETS
Sbjct: 658 GEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717
Query: 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRIL 777
LVWNYKYADVEFGR+QARDMLQHLWTGPISNA+V+VVQGS+SVEVR VGVTKGAAIDRIL
Sbjct: 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRIL 777
Query: 778 AEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERR 837
EIVHSK M T IDYVLCIGHFLGKDED+Y FFEPELP D P I R+R D +K G+RR
Sbjct: 778 GEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRR 837
Query: 838 QALKV-ASRGSSKISQGKTQRPAQAPEKKTPNH--NCTNVRQPSSDKTSYNVLDLNKENY 894
+ K+ +SR +SK SQGK QR + K NH + + R+PS +K ++VLDL ENY
Sbjct: 838 PSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENY 897
Query: 895 FSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 929
FSCAVGR R+NAR+LL SSD+VVSFLK+LA+ASSS
Sbjct: 898 FSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932
|
Length = 934 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1373 bits (3554), Expect = 0.0
Identities = 563/837 (67%), Positives = 666/837 (79%), Gaps = 57/837 (6%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQ 152
R RLLVVANRLPVSA R GEDSWSLE+S GGLVSALLGVKEFE +WIGW GV+V DEIG+
Sbjct: 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGK 69
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
ALT++LAEK CIPVFL+ ++ QYYNGYCNNILWP+FHY+GLPQEDR TR+F+SQ+
Sbjct: 70 AALTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYD 128
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY KAN+MF DVV ++Y++GDVVWCHDYHLMFLP+ LKEYN+ MKVGWFLHTPFPSSEI+
Sbjct: 129 AYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIY 188
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
+TLPSRS+LLRAVL ADL+GFHTYD+ARHF+SACTRILG EGT EGV DQG++TRVA FP
Sbjct: 189 KTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID ERFI E+ V+ H+KEL+ FAGRKV+LGVDRLDMIKGIPQK LAFEKFLEEN
Sbjct: 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEEN 308
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WR KV+L+QIAVPTR DVPEYQ+L SQVHE+VGRINGRFG++++VPIHHLD S+DF
Sbjct: 309 PEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNY 368
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
LCALYA+TDV LVTSLRDGMNLVSYEFVACQ KKGVL+LSEFAGA QSLGAGA+LVNPW
Sbjct: 369 LCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPW 428
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572
NITEV++AI ALNMS EERE RH HNF +V TH+AQ+WA+ F+SELND +VEA+LR +
Sbjct: 429 NITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488
Query: 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN 632
+P L E D I++Y +SNNRLLILGF TLTEP R QI+EM+L LHP+LK+ L
Sbjct: 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEP------RNSQIKEMDLGLHPELKETLK 542
Query: 633 ALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWV 692
ALC DPKTT+VVLS S +++LDKNF EYN+WLAAENGMFLR T+G+W+TTMPEH+N++WV
Sbjct: 543 ALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWV 602
Query: 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752
D +K+VF+YFT+RTPRS+ E+ ETSLVWNY+YADVEFGR QARDMLQHLW GPISNASV+
Sbjct: 603 DGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVD 662
Query: 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812
VV+G KSVEV A+GVTKGAAI RIL EIVH+K M T ID+V C G+FL KDEDVY FFEP
Sbjct: 663 VVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEP 722
Query: 813 ELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCT 872
E+ K + +
Sbjct: 723 EIL------------------------------------------------SKKKSSSSN 734
Query: 873 NVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 929
K S N++DL ENYFSCA+G+ RT AR++L SS++VVS L KLA A+++
Sbjct: 735 YSDSDK--KVSSNLVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVANTT 789
|
Length = 797 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 724 bits (1870), Expect = 0.0
Identities = 257/469 (54%), Positives = 315/469 (67%), Gaps = 15/469 (3%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEIGQK 153
RL+VV+NRLPV R G LE SAGGL ALLG + W GW+G V ++ G+
Sbjct: 1 RLIVVSNRLPVPITRGG-----LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEP 55
Query: 154 ALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
L L K PVFL E+ V YYNG+ N+ LWPLFHY P R +
Sbjct: 56 FLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYR--PDLIRYDRK-----AWE 108
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY + N++FA+ + + GD+VW HDYHLM LP L+E K+G+FLH PFPSSEI+
Sbjct: 109 AYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIY 168
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
RTLP R +LL +LA DLVGF TYD AR+F+SA +R LG E P GVE GR RV AFP
Sbjct: 169 RTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFP 228
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID +RF + VQ I EL+E+ GRK+++GVDRLD KG+P++LLAFE+FLEE+
Sbjct: 229 IGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEH 288
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WRGKVVL+QIAVP+R DVPEYQ+L QV E+VGRINGRFGTL PI +L+RS D
Sbjct: 289 PEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREE 348
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY DV LVT LRDGMNLV+ E+VA QD K GVLILSEFAGAAQ L GA+LVNP+
Sbjct: 349 LMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN-GALLVNPY 407
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561
+I +A+AIARAL M EERE+RH + + Q W E F+S+LN
Sbjct: 408 DIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 717 bits (1854), Expect = 0.0
Identities = 280/474 (59%), Positives = 350/474 (73%), Gaps = 10/474 (2%)
Query: 94 QRLLVVANRLPVSAIRR--GEDSWSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEI 150
RL+VV+NRLPV+A R G+ +S+++S+GGLVSAL G+ E E W+GW GV V ++
Sbjct: 1 SRLVVVSNRLPVTAKREEEGKWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDEDE 60
Query: 151 GQKALTKALAEKR-CIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ +++ L EK C+PVFLD++ V +YYNG+ N+ILWPLFHY P + +S
Sbjct: 61 PKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPNNE----DEFDRS 116
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ AY+K N++FAD + + YKDGD++W HDYHLM LP+ L++ D K+G+FLH PFPSS
Sbjct: 117 WWDAYVKVNKLFADKIVEVYKDGDLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG-VEDQGRLTRV 328
EI R LP R ++LR +L ADL+GFHTYDYARHF+S C+R+LG E T +G VE GR V
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDGGVEYGGRTVSV 236
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEK 387
AFPIGID R L+ VQ +KEL+E F +K++LGVDRLD IKGIPQKLLAFE+
Sbjct: 237 GAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAFER 296
Query: 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447
FLEE +WRGKVVL+QIAVP+R DV EYQ L SQV E+VGRING FGTL P+HHL RS
Sbjct: 297 FLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHRS 356
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
LDF L ALYA+ DV LVTSLRDGMNLV+YE+VACQ +KGVLILSEFAGAAQSL GAI
Sbjct: 357 LDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRKGVLILSEFAGAAQSLNDGAI 416
Query: 508 LVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561
LVNPW+I EVA AI AL MS EER+KRH F +++ H Q WAE+F+S+L
Sbjct: 417 LVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 724 bits (1871), Expect = 0.0
Identities = 300/731 (41%), Positives = 429/731 (58%), Gaps = 45/731 (6%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNV---PDEI 150
RL++V+NRLPV+ + R + L S GGL + L + W+GW G+++ +E
Sbjct: 2 RLIIVSNRLPVT-VVREDGGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQ 60
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLG--LPQEDRLATTRSFQ 208
+ + L E +PVFL + V +YY G+CN+ LWPLFHY EDR
Sbjct: 61 RAR-IEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRF------- 112
Query: 209 SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS 268
+ +Y + NQ FA+ + + GDVVW HDY LM LP L+E D ++G+FLH PFPS
Sbjct: 113 --WESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS 170
Query: 269 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
E+ R LP R ++L +L ADL+GFHTYDY RHF+S+ R+LG+E + GR+ RV
Sbjct: 171 FEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRV 230
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFP+GID ++F + + VQ I+ L++ GRK++L +DRLD KGIP++LLAFE+F
Sbjct: 231 DAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERF 290
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
LE+N +WRGKV L+Q+AVP+RT VP+YQ + ++ E+VGRING FGT+ PIH+ RSL
Sbjct: 291 LEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSL 350
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L ALY DVALVT LRDGMNLV+ E+VA + GVLILSE AGAA L A A+L
Sbjct: 351 PFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL-AEALL 409
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNP +I +A AI RAL M EE+ +R + + +WA F+ EL + + +
Sbjct: 410 VNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKA 469
Query: 569 RIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDL 627
+ + I RY ++ RLL+L ++ TL P EL +L
Sbjct: 470 FASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP----------ELAVPDKEL 519
Query: 628 KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHL 687
+ L L DP T + ++SG DR+ L++ F + + L AE+G + R G+W + E +
Sbjct: 520 RDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQ--LLEPV 577
Query: 688 NMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 747
EW D+++ + E F +RTP S E++E SL W+Y+ AD E G +A +++ L + +S
Sbjct: 578 ATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILAL-SSLLS 636
Query: 748 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVY 807
NA +EV++G+K VEVR GV KG A+ R+L D+VL IG DED++
Sbjct: 637 NAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE--------AGPYDFVLAIGDDT-TDEDMF 687
Query: 808 AFFEPELPDDG 818
LP+
Sbjct: 688 R----ALPETA 694
|
Length = 726 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 664 bits (1715), Expect = 0.0
Identities = 246/468 (52%), Positives = 314/468 (67%), Gaps = 10/468 (2%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NRLPVS R G+ + SAGGL +AL G+ K W+GW+G+ +E +
Sbjct: 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDE 60
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
T+ L E PVFL + YYNG+ N +LWPLFHY RL R + + A
Sbjct: 61 VSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHY-------RLDLARFDREDWEA 113
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N+ FAD + + + GD+VW HDYHL+ LP+ L+E D ++G+FLH PFPSSEI R
Sbjct: 114 YVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFR 173
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP R +LLR +L ADL+GF T YAR+F+S C+R+LG E T +G + GR RV AFP
Sbjct: 174 CLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFP 233
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID + F + VQ EL+E GRK+++GVDRLD KGIP++LLAFE+ LE
Sbjct: 234 IGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERY 293
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WRGKVVL+QIAVP+RTDVPEYQ L +V E+VGRING+FGTL P+ +L RSL
Sbjct: 294 PEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREE 353
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY DVALVT LRDGMNLV+ E+VACQD GVLILSEFAGAA+ L GA+LVNP+
Sbjct: 354 LAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEELS-GALLVNPY 412
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560
+I EVA+AI RAL M EER +RH +V TH Q WA +F+ +L
Sbjct: 413 DIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 548 bits (1413), Expect = 0.0
Identities = 233/473 (49%), Positives = 302/473 (63%), Gaps = 15/473 (3%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEI-SAGGLVSALLGVKE-FEARWIGWAGVNVPDEI 150
RL+VV+NRLPV G+ SAGGLV+AL + WIGW+G P +
Sbjct: 14 DSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDE 73
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQS 209
L + + E PV L ++ YYNG+ N ILWPLFHY + +R +
Sbjct: 74 SSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYER--------N 125
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ AY+K N+ FAD + + Y+ GD++W HDYHL+ +P+ L+E D K+G+FLH PFPSS
Sbjct: 126 WWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS 185
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED--QGRLTR 327
E+ R LP R ++L +L ADL+GF T YAR+F+ C+R+LG G + + GR+ +
Sbjct: 186 EVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVK 245
Query: 328 VAAFPIGIDSERFIRALEINPVQVHIKEL-QETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
V AFPIGID E F RAL+ VQ + EL E +K+++GVDRLD KGIPQ+LLAFE
Sbjct: 246 VGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFE 305
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446
+ LEE +WRGKVVLLQIA P+R DV EYQ L Q+ E+VGRING FG+L+ P+H+L R
Sbjct: 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR 365
Query: 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGA 506
LD L ALY DV LVT LRDGMNLV+ E+VA Q K GVLILSEFAGAA L A
Sbjct: 366 DLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL-RDA 424
Query: 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
++VNPW+ EVA+AI RAL MS EER++RH V TH WA +F+ +L
Sbjct: 425 LIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDL 477
|
Length = 486 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 454 bits (1169), Expect = e-146
Identities = 275/775 (35%), Positives = 416/775 (53%), Gaps = 76/775 (9%)
Query: 83 CERLDGRTFSRQRLLVVANRLPVSAIRR--GEDSWSLEISAGGLVSAL---LGVKEFEAR 137
C + + R+++VAN+LP+ A R+ G W L+ L LG E E
Sbjct: 49 CSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVI 108
Query: 138 WIGWAGVNV-PDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
++G + +E Q+ +++ L E +C+P FL D+ +YY+G+C LWPLFHY+ L
Sbjct: 109 YVGCLKEEIHLNE--QEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYM-L 165
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFAD----VVNKHYKDGDVVWCHDYHLMFLPKCLKE 251
P L R +S + AY+ N++FAD V+N + D VW HDYHLM LP L++
Sbjct: 166 PLSPDLGG-RFNRSLWQAYVSVNKIFADRIMEVINP---EDDFVWIHDYHLMVLPTFLRK 221
Query: 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 311
+ +K+G+FLH+PFPSSEI++TLP R +LLRA+L +DL+GFHT+DYARHF+S C+R+LG
Sbjct: 222 RFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLG 281
Query: 312 FEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKV 365
+ G+E GR + P+GI + L + + +KEL + F R +
Sbjct: 282 LSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIM 341
Query: 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEI 425
+LGVD +D+ KGI KLLA E+ L ++ +W+GKVVL+QIA P R + + + ++ H
Sbjct: 342 LLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHST 401
Query: 426 VGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD- 484
V RIN FG PI +D L F A Y V + LVT++RDGMNL+ YE++ +
Sbjct: 402 VKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQG 461
Query: 485 --------------LKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPE 530
KK +L++SEF G + SL +GAI VNPWNI VA+A+ AL M+
Sbjct: 462 NEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEP 520
Query: 531 EREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE------------AQLRIKQVPPSLR 578
E++ RH ++ +V+TH WA +F+ +L T + R+ + P+ R
Sbjct: 521 EKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFR 580
Query: 579 EADSIER----YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634
+ S+E Y R+ R ++L ++ TL + ++ LN L
Sbjct: 581 KL-SMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDI-----------LNTL 628
Query: 635 CHDPKTTIVVLSGSDRNVLDKNFQE-YNLWLAAENGMFLRCT-TGKWMTTMPEHLNMEWV 692
C D + ++S R L F L +AAE+G FLR +W T +P + W
Sbjct: 629 CRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPV-ADCSWK 687
Query: 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752
+ V + +TE T S E +ET+LVW Y+ AD +FG QA+++L HL ++N V
Sbjct: 688 QIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVT 746
Query: 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVY 807
V G VEV+ GV+KG R+L+ + ++ D+VLCIG DED++
Sbjct: 747 VKSGQNIVEVKPQGVSKGLVAKRLLSIM---QERGMLPDFVLCIGDDR-SDEDMF 797
|
Length = 854 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 282 bits (722), Expect = 2e-85
Identities = 175/496 (35%), Positives = 253/496 (51%), Gaps = 45/496 (9%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLG-VKEFEARWIGWAGVNVPDEIG-- 151
RL+VV+NR+ A + SAGGL +LG +K W GW+G E G
Sbjct: 3 RLVVVSNRI---APPDEHKA-----SAGGLAVGILGALKAAGGLWFGWSG-----ETGNE 49
Query: 152 QKALTKALAEKRCIPVF-LDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQS 209
+ L K F L E +YYN + N +LWP FHY L L Q R A
Sbjct: 50 DQPLKKVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPA------- 102
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ Y++ N + AD + KD D++W HDYHL+ L++ + ++G+FLH PFP+
Sbjct: 103 -WEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTP 161
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF---VSACTRILGFEGTPEGVEDQGRLT 326
EI LP +LL + DL+GF T + F +S TR+ G + T
Sbjct: 162 EIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRT 221
Query: 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
V +PIGI+ + I P+ + +L+ + + V+RLD KG+P++ LA+E
Sbjct: 222 EV--YPIGIEPDE-IAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYE 278
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446
LE+ GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++
Sbjct: 279 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ 338
Query: 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK-GVLILSEFAGAAQSLGAG 505
D L ++ +DV LVT LRDGMNLV+ E+VA QD GVL+LS+FAGAA L +
Sbjct: 339 HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS- 397
Query: 506 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565
A++VNP++ EVA A+ RAL M ER RH + + W E F+S+L
Sbjct: 398 ALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDL------ 451
Query: 566 AQLRIKQVPPSLREAD 581
KQ+ P E+
Sbjct: 452 -----KQIVPRSAESQ 462
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 272 bits (696), Expect = 2e-81
Identities = 148/502 (29%), Positives = 236/502 (47%), Gaps = 53/502 (10%)
Query: 99 VANRLPVSAIR--RGEDSWSLEISAGGLVSALLGVKEFEAR----WIGWAGVNVPDEIGQ 152
+ +RLP R G+ S G++ LL F W+ WA +
Sbjct: 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSF--FGDGRAGTWVAWAEHDENSGETF 58
Query: 153 KALTKALAEKRCIP--VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ 210
+ AE + + L ++ V +Y+ WP+ H +F +
Sbjct: 59 DSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILH--------------TFPER 104
Query: 211 F-------AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLH 263
F ++K N+ FA+ +G VW HDY+L +P +++ D+K+ +F H
Sbjct: 105 FQFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHH 164
Query: 264 TPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQ- 322
TPFPS+++ LP R ++ ++L D +GFH Y +FV A ++ + D
Sbjct: 165 TPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPR 224
Query: 323 --------------------GRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 362
R+ ++ A P+G D ER AL ++ ++ ++ AG
Sbjct: 225 FITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAG 284
Query: 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQV 422
K++L +R+D KGI +KL A+E+ LE + GKV L+ VP + + Y L Q+
Sbjct: 285 VKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQI 344
Query: 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482
+ VGRINGRF + P+ RSL + + A +A+ DV +T LRDG+NLV+ E+VA
Sbjct: 345 EQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAA 404
Query: 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542
Q L GVL+LSEFAGAA L GA+L NP++ + I AL M E++ R F
Sbjct: 405 QGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDA 463
Query: 543 VTTHTAQEWAETFVSELNDTVV 564
V + Q WA+ F++ ++
Sbjct: 464 VNYYDVQRWADEFLAAVSPQAQ 485
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 8e-72
Identities = 76/221 (34%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654
L ++ TL+ V+ P L LN L DP T+ ++SG R D
Sbjct: 1 FLDYDGTLSPIVEDP---------DAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFED 51
Query: 655 KNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQR 714
F NL LAAE+G F+R G+ T + E +++W + + E +TERTP S+ E +
Sbjct: 52 LFFGVPNLGLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDK 111
Query: 715 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAID 774
+++L W+Y+ AD +FG QA+++ +HL + V V QG K VEVR VGV+KG A +
Sbjct: 112 KSALAWHYRNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAE 171
Query: 775 RILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELP 815
R+L E+ + D+ LCIG DED++ P
Sbjct: 172 RLLEELGSAGSP---PDFPLCIGDDRT-DEDMFDVVNPTKM 208
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 20/235 (8%)
Query: 574 PPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNA 633
P+L+ +E YL + RLL L ++ TLTE V P E + L L
Sbjct: 1 TPALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP--------EAAV-PDDRLLSLLQD 51
Query: 634 LCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVD 693
L DP+ + ++SG L++ F + L AE+G +R GKW + E ++ W+
Sbjct: 52 LASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLK 111
Query: 694 SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV 753
+ + EY+ ERTP S+ E++ ++ +Y+ A+ + G A L I+ + V
Sbjct: 112 EVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL----INELKLRV 167
Query: 754 VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 808
G VE+R GV+KGAAI I+ E+ + + G L DED +A
Sbjct: 168 TPGKMVVELRPPGVSKGAAIKYIMDELPFDG------RFPIFAGDDL-TDEDAFA 215
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 9e-12
Identities = 43/196 (21%), Positives = 73/196 (37%), Gaps = 15/196 (7%)
Query: 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648
+ R ++ TL+E V P + L L L P I ++SG
Sbjct: 1 ARKRAFFFDYDGTLSEIVPDPD---------AAVVSDRLLTILQKLAARPHNAIWIISGR 51
Query: 649 DRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPR 708
+ L LA E+G ++ W + E T R P
Sbjct: 52 KFLEKWLGVKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITTR-PG 110
Query: 709 SHFEQRETSLVWNYKYADV-EFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGV 767
E++ +L W+Y+ A V E R +A+++ + + + +EV+ G VE++ V
Sbjct: 111 VFIERKGVALAWHYRQAPVPELARFRAKELKEKILS----FTDLEVMDGKAVVELKPRFV 166
Query: 768 TKGAAIDRILAEIVHS 783
KG + R+L S
Sbjct: 167 NKGEIVKRLLWHQPGS 182
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-06
Identities = 72/312 (23%), Positives = 111/312 (35%), Gaps = 61/312 (19%)
Query: 233 DVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVG 292
DVV HD+ + + + +H E R LL+ A +
Sbjct: 87 DVVHAHDWLALLAAALAA-RLLGIPLVLTVH----GLEFGRPGNELGLLLKLARALERRA 141
Query: 293 FHTYD-------YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE 345
D R + G ++T + P G+D+ERF A
Sbjct: 142 LRRADRIIAVSEATREELRE-----------LGGVPPEKITVI---PNGVDTERFRPAPR 187
Query: 346 INPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405
++ I E V+L V RL KG+ L A K +E D R +V
Sbjct: 188 AARRRLGIPE------DEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIV----- 236
Query: 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465
D P + L + E+ + R + L ALYA DV ++
Sbjct: 237 ----GDGPLREELEALAAEL--GLGDRV---------TFLGFVPDEDLPALYAAADVFVL 281
Query: 466 TSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 522
SL +G LV E +A G+ ++ S+ G + + G +LV P + +A AI
Sbjct: 282 PSLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAIL 336
Query: 523 RALNMSPEEREK 534
R L+ PE R +
Sbjct: 337 RLLD-DPELRRR 347
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 49.9 bits (118), Expect = 4e-06
Identities = 67/313 (21%), Positives = 110/313 (35%), Gaps = 48/313 (15%)
Query: 227 KHYKDGDVVWCHDYHLMFLPK--CLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284
K D++ H L L + + LH P + L LLR
Sbjct: 79 KRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRL 138
Query: 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344
+L VS + L +E G ++ P GID+E+F
Sbjct: 139 LLKRLKKALRLLADRVIAVSPALKEL--------LEALGVPNKIVVIPNGIDTEKFA--- 187
Query: 345 EINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404
P ++ + G+ V+L V RLD KG+ + A K + D + L I
Sbjct: 188 ---PARIGLLP----EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIK-----LVI 235
Query: 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464
E ++L + + + + L L A DV +
Sbjct: 236 VGDGPERREELEKLAKK-LGLEDNV-------------KFLGYVPDEELAELLASADVFV 281
Query: 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAI 521
+ SL +G LV E +A G +++ G + G +LV P ++ E+A+A+
Sbjct: 282 LPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336
Query: 522 ARALNMSPEEREK 534
+ L PE RE+
Sbjct: 337 EQLLED-PELREE 348
|
Length = 381 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 6e-04
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 37/207 (17%)
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
GID++RF + +P + +++ V+L V RL K P L AF K
Sbjct: 160 YNGIDTDRFRK----DPAR--RLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKL 213
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF-GTLTAVPIHHLDRS 447
L + D + L IA D P L + + + G +
Sbjct: 214 LSDYLDIK-----LLIA----GDGPLRATLERLIKALGLSNRVKLLGLRDDIA------- 257
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
A Y D+ +++S +G LV E +AC+ ++ ++ G + +G +
Sbjct: 258 -------AYYNAADLFVLSSAWEGFGLVVAEAMACELP----VVATDAGGVREVVGDSGL 306
Query: 508 LVNPWNITEVANAIARALNMSPEEREK 534
+V + +AN I L MS EER+
Sbjct: 307 IVPISDPEALANKIDEILKMSGEERDI 333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.001
Identities = 78/365 (21%), Positives = 110/365 (30%), Gaps = 79/365 (21%)
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
Y++ N+ A+ D DVV HD + LP K W H ++
Sbjct: 67 EIYLEWNEENAERPLLDL-DADVVVIHDPQPLALPLFKK--KRGRPWIWRCHI-----DL 118
Query: 272 HRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 330
D L+ + D FH +Y V R
Sbjct: 119 SSPNRRVWDFLQPYIEDYDAAVFHLPEYVPPQVP---------------------PRKVI 157
Query: 331 FPIGID---------SERFIRA-LEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380
P ID S I LE K + R + V R D K
Sbjct: 158 IPPSIDPLSGKNRELSPADIEYILE--------KYGIDPE--RPYITQVSRFDPWKDPFG 207
Query: 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440
+ A+ K E D L + TD PE + +V E + LT P
Sbjct: 208 VIDAYRKVKERVPD-----PQLVLVGSGATDDPEGWIVYEEVLEYAE-GDPDIHVLTLPP 261
Query: 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAA 499
+ L+ + AL + V L S+R+G L E L KG +I G
Sbjct: 262 VSDLE-------VNALQRASTVVLQKSIREGFGLTVTE-----ALWKGKPVIAGPVGGIP 309
Query: 500 QSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-----TTHTAQEWA 552
+ G LV+ + E A I L PE R K + HV T +++
Sbjct: 310 LQIEDGETGFLVDT--VEEAAVRILYLLR-DPELRRKMGANAREHVRENFLITRHLKDYL 366
Query: 553 ETFVS 557
Sbjct: 367 YLISK 371
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 937 | |||
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.94 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.94 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.94 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.94 | |
| PLN02316 | 1036 | synthase/transferase | 99.93 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.93 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.93 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.93 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.92 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.92 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.92 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.92 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.91 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.91 | |
| PLN00142 | 815 | sucrose synthase | 99.91 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.9 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.9 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.9 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.9 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.9 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.89 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.89 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.88 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.88 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.87 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.87 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.87 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.87 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.87 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.86 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.86 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.86 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.86 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.86 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.86 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.85 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.85 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.85 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.85 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.85 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.84 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.84 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.84 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.84 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.83 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.83 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.83 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.83 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.83 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.83 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.83 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.82 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.82 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.82 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.82 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.82 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.82 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.82 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.82 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.81 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.81 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.8 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.8 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.79 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.79 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.79 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.78 | |
| PLN02887 | 580 | hydrolase family protein | 99.78 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.78 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.78 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.77 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.77 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.77 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.76 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.76 | |
| PLN02423 | 245 | phosphomannomutase | 99.75 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.75 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.74 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.74 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.74 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.74 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.73 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.72 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.72 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.69 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.68 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.66 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.66 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.65 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.65 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.61 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.6 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.54 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.52 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.5 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.41 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.37 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.36 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.3 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.3 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.27 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.24 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.21 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.2 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.19 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.16 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.16 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.14 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.01 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.0 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.99 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.97 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.9 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.88 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.49 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.44 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.43 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.42 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.32 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.29 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.19 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.09 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.08 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.01 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.86 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.62 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 97.6 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 97.43 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.34 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.26 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.13 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.79 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 96.77 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.4 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 96.38 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.34 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.27 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 96.26 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.17 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.13 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.02 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.02 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.93 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 95.69 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 95.65 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 95.51 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 95.51 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.45 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 95.43 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.42 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.28 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.12 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.03 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.95 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 94.82 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 94.71 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 94.47 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.23 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 94.06 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 94.03 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 93.91 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.75 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.68 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.61 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 93.58 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 93.57 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.17 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.16 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.06 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 93.02 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 92.98 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 92.88 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 92.45 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 92.44 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 92.32 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 92.3 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.07 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 91.91 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.83 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 91.73 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 91.63 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 91.48 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 91.35 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 91.19 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 91.08 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 90.99 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 90.95 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 90.59 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 90.47 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 90.39 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 89.76 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 89.74 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 89.69 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 88.95 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 88.73 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 88.32 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 88.31 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 88.04 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 88.01 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 86.48 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 86.35 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 86.28 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 86.16 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 85.02 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 85.02 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 84.84 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 84.25 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 83.97 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 83.87 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 83.48 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 83.41 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 82.72 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 82.56 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 82.25 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 81.74 | |
| PRK08238 | 479 | hypothetical protein; Validated | 81.68 | |
| PLN02940 | 382 | riboflavin kinase | 80.67 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 80.45 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 80.39 |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-188 Score=1696.37 Aligned_cols=926 Identities=82% Similarity=1.275 Sum_probs=857.1
Q ss_pred CCCCCCCCCCCCCChhhHHHHhhhhhHHHhhhhhccCCCCCCCC-CCCCcccchhhhhcccCCCCCCcccccCCCCCC--
Q 002314 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRDGDNLGPSIVDEDLEGPAS-- 77 (937)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (937)
||||+|+|++...+++|++||+|+ ||||+.++++...++.+ +.+.++.|+++...|..+.++..+++..+|.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAES 77 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHH---HHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhc
Confidence 899999999977888999999999 99999999998666666 788899999999999999999999999998733
Q ss_pred CCCCCCccCCCCCCCCCcEEEEEcCCccceEecCCCcEEEEecCCcHHHhccccccCCcEEEEeCCCCCCCchhhHHHHH
Q 002314 78 TPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK 157 (937)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~ 157 (937)
...++|.+++++..-++||||||||||+.++++++|.|++++++|||+++|.+++..+++||||+|..+++++++..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~ 157 (934)
T PLN03064 78 ALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTK 157 (934)
T ss_pred cCCcccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHH
Confidence 35678888888665589999999999999988778999999999999999999977899999999988776656666777
Q ss_pred hhcCceEEEEecChhhhhhhhhhhhhhccccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Q 002314 158 ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237 (937)
Q Consensus 158 ~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwv 237 (937)
.+.+|+|+||||+++++++||+||||++|||+|||++.++.++....+.++..|++|++||++||++|++++++||+|||
T Consensus 158 ~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWV 237 (934)
T PLN03064 158 ALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237 (934)
T ss_pred HhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 88999999999999999999999999999999999865554433333334467999999999999999999999999999
Q ss_pred eCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC
Q 002314 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE 317 (937)
Q Consensus 238 HDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~ 317 (937)
||||||+||.+||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||.++||++....
T Consensus 238 HDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~ 317 (934)
T PLN03064 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 317 (934)
T ss_pred ecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccC
Q 002314 318 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 397 (937)
Q Consensus 318 ~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~ 397 (937)
+++++||.++|.++|+|||++.|...+..++++++++.++++++++++||+|||||+.|||.++|+||++||++||+|++
T Consensus 318 ~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~ 397 (934)
T PLN03064 318 GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRD 397 (934)
T ss_pred eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHH
Q 002314 398 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477 (937)
Q Consensus 398 ~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~ 477 (937)
+|+||||+.|+|+++++|++|+.++.++|++||++||+.+|.||+|+.+.+++++|.+||++|||||+||++||||||++
T Consensus 398 kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~ 477 (934)
T PLN03064 398 KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477 (934)
T ss_pred CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHH
Q 002314 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (937)
Q Consensus 478 EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~ 557 (937)
||||||.+++|+||+|||+|++++|+.+|++|||||++++|+||.+||+|+++||++|+++++++|.+||+++|+++||.
T Consensus 478 Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVS 557 (934)
T ss_pred HHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 99999999999999999999999997789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHhhhccccCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcC
Q 002314 558 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD 637 (937)
Q Consensus 558 ~l~~~~~~~~~~~~~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d 637 (937)
+|+++..+...+..++.+.|+.+.++++|+.++++||||||||||++++++|.++.+++.+..+.++++++++|++|+++
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 99998776666666677899999999999999999999999999999999996556666666788999999999999999
Q ss_pred CCCeEEEEcCCChhhHHHHhcccCceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecce
Q 002314 638 PKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717 (937)
Q Consensus 638 ~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~s 717 (937)
++++|+|+|||++++|++||+.++++++|+||++++..++.|...+++..+.+|++.+..+|++|++++||++||.|+++
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~S 717 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcE
Confidence 99999999999999999999999999999999999987888975444556779999999999999999999999999999
Q ss_pred EEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEe
Q 002314 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (937)
Q Consensus 718 l~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iG 797 (937)
++||||.+||+++..|++++.+++++..+.+.+++|+.|+++|||+|.|+|||.|+++||+++..+.....++|||+|||
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~G 797 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIG 797 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeC
Confidence 99999999999999999999999855555566899999999999999999999999999998742211123689999999
Q ss_pred cCCCC-cHHHHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhh-hccCCcccccCCCCCCCCCCCCCCCCCC--CCC
Q 002314 798 HFLGK-DEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKV-ASRGSSKISQGKTQRPAQAPEKKTPNHN--CTN 873 (937)
Q Consensus 798 D~d~n-DEdMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 873 (937)
| |.+ |||||+++...++..+.+++|++..++.+++.+++|..+. .+++++++++.++|++.++..+...+|+ .++
T Consensus 798 D-d~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (934)
T PLN03064 798 H-FLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGS 876 (934)
T ss_pred C-CCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccccccccccccccCCc
Confidence 9 875 9999999999999999999999999999999999998776 7788999999999999999999998884 667
Q ss_pred CCCCCCCCCccccccCCCCCeEEEEECCCCCccceeeCCHHHHHHHHHHhhhccCcc
Q 002314 874 VRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSSH 930 (937)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~~La~~~~~~ 930 (937)
.+..+.+.++|+++|++++|||||+||+|+|+|+|+|++++||+.||+.||+.+..+
T Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (934)
T PLN03064 877 DRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSSF 933 (934)
T ss_pred cccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccCC
Confidence 777889999999999999999999999999999999999999999999999887653
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-158 Score=1446.15 Aligned_cols=746 Identities=36% Similarity=0.673 Sum_probs=669.6
Q ss_pred CCcEEEEEcCCccceEecCC--CcEEEEecCCcHHHhcccc-c--cCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 002314 93 RQRLLVVANRLPVSAIRRGE--DSWSLEISAGGLVSALLGV-K--EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (937)
Q Consensus 93 ~~~livvsnrlP~~~~~~~~--~~~~~~~~~ggl~~~l~~~-~--~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (937)
..||||||||||+.++++++ +.|.+++++|||+++|.++ . ..+++||||+|..++.+++......++++|+|+||
T Consensus 59 ~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 138 (854)
T PLN02205 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPT 138 (854)
T ss_pred CCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEe
Confidence 57999999999999998643 6899999999999999976 3 47899999999877765444444666788999999
Q ss_pred ecChhhhhhhhhhhhhhccccccCCCC-CCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCC-CCEEEEeCcccch
Q 002314 168 FLDEDIVHQYYNGYCNNILWPLFHYLG-LPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMF 244 (937)
Q Consensus 168 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~-~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~-~DvVwvHDyhl~l 244 (937)
||+++++++||+||||++|||+|||+. ..+. ....|+ ..|++|++||++||++|++++++ +|+|||||||||+
T Consensus 139 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~----~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~l 214 (854)
T PLN02205 139 FLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPD----LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMV 214 (854)
T ss_pred eCCHHHHHHHHHhhhhccccchhccCCCCCcc----ccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhH
Confidence 999999999999999999999999993 3321 112577 56999999999999999999998 6999999999999
Q ss_pred HHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC----Ccee
Q 002314 245 LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP----EGVE 320 (937)
Q Consensus 245 lp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~----~~v~ 320 (937)
||.+||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|+||+++.. .+++
T Consensus 215 lP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~ 294 (854)
T PLN02205 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294 (854)
T ss_pred HHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998754 3578
Q ss_pred eCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc--CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCc
Q 002314 321 DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 398 (937)
Q Consensus 321 ~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~ 398 (937)
|+||.++|.++|+|||++.|...+..+++.+.+++++++++ ++++||+|||||+.|||.++|+||++||++||+|++|
T Consensus 295 ~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gk 374 (854)
T PLN02205 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGK 374 (854)
T ss_pred ECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999988999999999999996 6899999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHH
Q 002314 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (937)
Q Consensus 399 v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~E 478 (937)
|+||||+.|+|+++++|++++.+|+++|++||++||+.+|.||+|+.+.++++|+.|||++|||+++||+|||||||++|
T Consensus 375 vvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 375 VVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC---------------CCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh
Q 002314 479 FVACQDL---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (937)
Q Consensus 479 amAc~~~---------------~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V 543 (937)
|+|||.+ ++|+||+|||+||+++| .+|++|||||++++|+||.+||+||.+||+.|+++++++|
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v 533 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999963 58999999999999999 7899999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHhHHHhh-hc---------cc-----cCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCC
Q 002314 544 TTHTAQEWAETFVSELNDTVVEAQ-LR---------IK-----QVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 608 (937)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~~~~~~~-~~---------~~-----~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~ 608 (937)
.+||+.+|+++||.+|+.+++.+. .+ ++ .-+++|+++.++++|+++++|+|||||||||++...
T Consensus 534 ~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~- 612 (854)
T PLN02205 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS- 612 (854)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-
Confidence 999999999999999999865431 11 11 115789999999999999999999999999998753
Q ss_pred CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc-CceEEeeCceEEEecCC-eeeeccccc
Q 002314 609 PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTG-KWMTTMPEH 686 (937)
Q Consensus 609 P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~l~liaenG~~ir~~~~-~w~~~~~~~ 686 (937)
....++++++++|++|++++++.|+|+|||++..|+++|+.+ ++++||+||++++..++ .|.... ..
T Consensus 613 ----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~~ 681 (854)
T PLN02205 613 ----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-PV 681 (854)
T ss_pred ----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-hh
Confidence 245688999999999999999999999999999999999987 69999999999996554 786543 33
Q ss_pred cChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECC
Q 002314 687 LNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG 766 (937)
Q Consensus 687 ~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~g 766 (937)
.+..|++.+..+++.|++++||+++|.|+++++||||.+||+++..+++++..++ +..+.+.++.+..|+++|||+|++
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~g 760 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQG 760 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeCC
Confidence 4668999999999999999999999999999999999999999888889999888 666666678899999999999999
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccC
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRG 846 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (937)
+|||.|+++|++.+.. ..+++++++|||| |.|||+||++++......
T Consensus 761 vnKG~Al~~Ll~~~~~---~g~~~d~vl~~GD-D~nDedMF~~~~~~~~g~----------------------------- 807 (854)
T PLN02205 761 VSKGLVAKRLLSIMQE---RGMLPDFVLCIGD-DRSDEDMFEVITSSMAGP----------------------------- 807 (854)
T ss_pred CCHHHHHHHHHHHHHh---cCCCcccEEEEcC-CccHHHHHHHhhhhccCC-----------------------------
Confidence 9999999999876421 0146799999999 999999999996410000
Q ss_pred CcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEEEEECCCCCccceeeCCHHHHHHHHHHhhhc
Q 002314 847 SSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADA 926 (937)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~~La~~ 926 (937)
. + ....++|||+||.++|+|+|||+|++||.+||+.|++.
T Consensus 808 ---------------------------~------------~-~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~ 847 (854)
T PLN02205 808 ---------------------------S------------I-APRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASV 847 (854)
T ss_pred ---------------------------c------------c-cccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhc
Confidence 0 0 01146899999999999999999999999999999987
Q ss_pred cCc
Q 002314 927 SSS 929 (937)
Q Consensus 927 ~~~ 929 (937)
+.+
T Consensus 848 ~~~ 850 (854)
T PLN02205 848 SEQ 850 (854)
T ss_pred chh
Confidence 654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-157 Score=1434.06 Aligned_cols=784 Identities=71% Similarity=1.179 Sum_probs=687.5
Q ss_pred CCCCCCCCcEEEEEcCCccceEecCCCcEEEEecCCcHHHhccccccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEE
Q 002314 87 DGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIP 166 (937)
Q Consensus 87 ~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~p 166 (937)
+.|+. ++||||||||||+.+.++++|.|++++++|||+++|.+++..+++||||+|..+++++++..+...+.+++|+|
T Consensus 5 ~~~~~-~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~p 83 (797)
T PLN03063 5 DARGE-RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIP 83 (797)
T ss_pred cCccC-CCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEE
Confidence 44443 78999999999999888777999999999999999999966699999999987665545556677788999999
Q ss_pred EecChhhhhhhhhhhhhhccccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHH
Q 002314 167 VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (937)
Q Consensus 167 V~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp 246 (937)
||| ++++++||+||||++|||+|||++.++.+.....+.++..|++|++||++||++|++++++||+|||||||||+||
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp 162 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLP 162 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHH
Confidence 999 9999999999999999999999843332222222334567999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeee
Q 002314 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLT 326 (937)
Q Consensus 247 ~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~ 326 (937)
++||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+++++++....++.++|+.+
T Consensus 163 ~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~ 242 (797)
T PLN03063 163 QYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVT 242 (797)
T ss_pred HHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999988778899999999
Q ss_pred EEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEc
Q 002314 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (937)
Q Consensus 327 ~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~ 406 (937)
+|.++|+|||++.|.+....+++++....++++++++++||+|||||+.||+.++|+||++|++++|+++++++||||++
T Consensus 243 ~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~ 322 (797)
T PLN03063 243 RVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAV 322 (797)
T ss_pred EEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEec
Confidence 99999999999999887766777777888888899999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCC
Q 002314 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (937)
Q Consensus 407 p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~ 486 (937)
|+++++++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||+..+
T Consensus 323 psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~ 402 (797)
T PLN03063 323 PTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK 402 (797)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHHHh
Q 002314 487 KGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEA 566 (937)
Q Consensus 487 ~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~~ 566 (937)
+|++|+|||+|+++++|.+|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|++.||.+|.++....
T Consensus 403 ~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~ 482 (797)
T PLN03063 403 KGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEA 482 (797)
T ss_pred CCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhh
Confidence 89999999999999997799999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhccccCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc
Q 002314 567 QLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (937)
Q Consensus 567 ~~~~~~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS 646 (937)
.......++.|+.+.++++|+++++++|||||||||++..++|. ..+++.++++++++|++|+++++|.|+|+|
T Consensus 483 ~~~~~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvS 556 (797)
T PLN03063 483 ELRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI------KEMDLGLHPELKETLKALCSDPKTTVVVLS 556 (797)
T ss_pred hhcccCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc------ccccCCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 55555566889999999999999999999999999998865331 004578999999999999999999999999
Q ss_pred CCChhhHHHHhcccCceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccC
Q 002314 647 GSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYAD 726 (937)
Q Consensus 647 GR~~~~L~~~~~~~~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad 726 (937)
||++++|++||+.++++++|+||++++..++.|...++...+.+|++.+..+|++|++++||++||.|+++++||||.+|
T Consensus 557 GR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~ad 636 (797)
T PLN03063 557 RSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYAD 636 (797)
T ss_pred CCCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCC
Confidence 99999999999998999999999999977788976543445778999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHH
Q 002314 727 VEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDED 805 (937)
Q Consensus 727 ~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEd 805 (937)
|+++..++.++..++.+..+.+.+++|+.||++|||+|.++|||.|+++||+++........++|||+|+|| |. +||+
T Consensus 637 p~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd-d~~~DEd 715 (797)
T PLN03063 637 VEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY-FLEKDED 715 (797)
T ss_pred hHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC-CCCCcHH
Confidence 999988999999988444445567999999999999999999999999999987310001125799999999 75 6999
Q ss_pred HHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 002314 806 VYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYN 885 (937)
Q Consensus 806 Mf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (937)
||+++.....+. . .+.+...+++ + ++...+.
T Consensus 716 mF~~l~~~~~~~-----~---------------------~~~~~~~~~~--------~---------------~~~~~~~ 746 (797)
T PLN03063 716 VYTFFEPEILSK-----K---------------------KSSSSNYSDS--------D---------------KKVSSNL 746 (797)
T ss_pred HHHhcccccccc-----c---------------------cccccccccc--------c---------------ccccccc
Confidence 999997510000 0 0000000000 0 0000111
Q ss_pred cccCCCCCeEEEEECCCCCccceeeCCHHHHHHHHHHhhhccCc
Q 002314 886 VLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 929 (937)
Q Consensus 886 ~~~~~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~~La~~~~~ 929 (937)
...+..+.|+|+||.++|.|+|||+|++||.++|+.|++..+.
T Consensus 747 -~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~~ 789 (797)
T PLN03063 747 -VDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVANTT 789 (797)
T ss_pred -cccccCceEEEEECCCCccCeecCCCHHHHHHHHHHHhccCcc
Confidence 1123357999999999999999999999999999999986543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-142 Score=1306.94 Aligned_cols=721 Identities=42% Similarity=0.750 Sum_probs=663.4
Q ss_pred CcEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCc--hhhHHHHHhhcCceEEEEecC
Q 002314 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLD 170 (937)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~--~~~~~~~~~~~~~~~~pV~l~ 170 (937)
+||||||||||+.+.+++ |.|++++++|||+++|.++ +..+++||||+|...+.+ .++..++..+.+|+|+||||+
T Consensus 1 ~~livvsnr~p~~~~~~~-~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 79 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED-GGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLS 79 (726)
T ss_pred CCEEEEEcCCCcceeecC-CceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCC
Confidence 489999999999988754 5899999999999999998 778999999999876542 222334567789999999999
Q ss_pred hhhhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHH
Q 002314 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (937)
Q Consensus 171 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~L 249 (937)
+++++.||+||||++|||+|||++... .|+ .+|++|++||++||++|++.++++|+|||||||||+||.+|
T Consensus 80 ~~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 80 AEEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151 (726)
T ss_pred HHHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHH
Confidence 999999999999999999999995332 477 56999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEE
Q 002314 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVA 329 (937)
Q Consensus 250 r~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~ 329 (937)
|++.|+++||||||+|||++++|+++|+|++||+|||+||+||||+++|++||+++|.++++++.....++++|+.++|.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~ 231 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887777889999999999
Q ss_pred EEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCC
Q 002314 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (937)
Q Consensus 330 v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r 409 (937)
++|+|||++.|.+....+++.+..+.+|+.++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|++
T Consensus 232 v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr 311 (726)
T PRK14501 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR 311 (726)
T ss_pred EEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 99999999999988777777777888888888999999999999999999999999999999999999999999999998
Q ss_pred CChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCce
Q 002314 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (937)
Q Consensus 410 ~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~ 489 (937)
.+.++|+++++++++++++||++||+.+|.||+|+.+.+++++++++|++|||||+||++||||||++|||||+.+++|+
T Consensus 312 ~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~ 391 (726)
T PRK14501 312 TGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391 (726)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCce
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred EEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHHHhhhc
Q 002314 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLR 569 (937)
Q Consensus 490 lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~~~~~ 569 (937)
+|+|+++|+++++ .+|++|||+|++++|++|.++|+|+.+|+++|+++++++|.+||+.+|+++|+..+.++...+...
T Consensus 392 ~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~ 470 (726)
T PRK14501 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470 (726)
T ss_pred EEEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999998 679999999999999999999999999999999999999999999999999999999987654322
Q ss_pred cccCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 570 IKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 570 ~~~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
.....+.|+++.++++|+.+++|||+|||||||++...+| ....++++++++|++|++++|+.|+|+|||+
T Consensus 471 ~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 2333577899999999999999999999999999987666 4567899999999999998999999999999
Q ss_pred hhhHHHHhcccCceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhh
Q 002314 650 RNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 729 (937)
Q Consensus 650 ~~~L~~~~~~~~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~ 729 (937)
+..++++|+.+++++||+||++++..++.|.... ..+..|++.+.++++.+.+++||+++|.|+.+++|||+.+|+++
T Consensus 542 ~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~ 619 (726)
T PRK14501 542 RDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPEL 619 (726)
T ss_pred HHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHH
Confidence 9999999998899999999999997777887543 24678999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHh
Q 002314 730 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 809 (937)
Q Consensus 730 ~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~ 809 (937)
+..++.++..++ ...+.+.++.++.|+.++||+|+++|||.|+++|++. .++++++|||| |.|||+||++
T Consensus 620 ~~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~Mf~~ 689 (726)
T PRK14501 620 GEARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDMFRA 689 (726)
T ss_pred HHHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHHHHh
Confidence 888888888888 6666667788899999999999999999999999983 35799999999 9999999998
Q ss_pred cCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 002314 810 FEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDL 889 (937)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (937)
+..
T Consensus 690 ~~~----------------------------------------------------------------------------- 692 (726)
T PRK14501 690 LPE----------------------------------------------------------------------------- 692 (726)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 742
Q ss_pred CCCCeEEEEECCCCCccceeeCCHHHHHHHHHHhhh
Q 002314 890 NKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLAD 925 (937)
Q Consensus 890 ~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~~La~ 925 (937)
.+++|+||.++|.|+|+|+++++|..+|+.|+.
T Consensus 693 ---~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 693 ---TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred ---CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 378999999999999999999999999999874
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-121 Score=1083.84 Aligned_cols=722 Identities=46% Similarity=0.812 Sum_probs=667.5
Q ss_pred CCcEEEEEcCCccceE-ecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecC
Q 002314 93 RQRLLVVANRLPVSAI-RRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 170 (937)
Q Consensus 93 ~~~livvsnrlP~~~~-~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~ 170 (937)
+.|+|+|||+||+.+. +.+++.|.+++++|||++++.++ +..+..||||.|..++++++.......+...+|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 5789999999999984 45588999999999999999987 788899999999888887777777888899999999999
Q ss_pred hhhhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHH
Q 002314 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (937)
Q Consensus 171 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~L 249 (937)
++...++|++|||++|||+|||...+..... . .|+ ..|++|+.+|++||++|++.++++|+|||||||||++|.++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~--~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPAF--K-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchhh--h-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 9999999999999999999999933331211 1 344 56999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccC----CCceeeCCee
Q 002314 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRL 325 (937)
Q Consensus 250 r~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~----~~~v~~~gr~ 325 (937)
|+...+++||||+|.|||++|+|+|+|.|++|+.+|+++|+||||+++|+|||+++|.|+++++.. ..++.++||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4568999999
Q ss_pred eEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEE
Q 002314 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (937)
Q Consensus 326 ~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~ 405 (937)
+.|.++|+|||+.+|......+.+..+..+++..++++++|++|||+|+.||+.+++.||++|+++||+++++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999988888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCC
Q 002314 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (937)
Q Consensus 406 ~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~ 485 (937)
.|+++++++|++++.++..++.+||++||+..+.||+++...++..++.++|.+||+++++|++|||||+++||++|+.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHHH
Q 002314 486 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (937)
Q Consensus 486 ~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~ 565 (937)
+.+++|+|+|+|+.+.++.++++|||||.++++.+|..+|+|+.+|+..|+...+.++..|+...|+..|+..+.+.+..
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999889999999999999999999999999999999999999999999999999999988888877
Q ss_pred hhhccccCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEE
Q 002314 566 AQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 645 (937)
Q Consensus 566 ~~~~~~~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~Iv 645 (937)
..+. ..+.+.|..+.++..|+++++|+|+||||||+++.. | ..+...|+.||.||+|.|+|+
T Consensus 479 ~~~~-~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~--~---------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GFLG-FRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPR--S---------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cccc-cccccccChhHhhhhhhhccceEEEecccccccCCC--C---------------chHHHHHHHHhcCCCCeEEEE
Confidence 6533 334466899999999999999999999998887653 2 118999999999999999999
Q ss_pred cCCChhhHHHHhccc-CceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeec
Q 002314 646 SGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKY 724 (937)
Q Consensus 646 SGR~~~~L~~~~~~~-~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ 724 (937)
|||++..++.|+... ++|++||||+++|.+++ |.+.+ .+.+|++.+++++++|++||||+++|.|+++++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998777 89999999999998666 98765 68899999999999999999999999999999999999
Q ss_pred cChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcH
Q 002314 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDE 804 (937)
Q Consensus 725 ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDE 804 (937)
+|++++..||+++.++| +. .+.+++|+.|+..|||+|.|++||.|+..++..+. .++|+++|+|| |.+||
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 54 67789999999999999999999999999999876 46899999999 99999
Q ss_pred HHHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 002314 805 DVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSY 884 (937)
Q Consensus 805 dMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (937)
+||+++.....+.
T Consensus 687 d~~~~~~~~~~~~------------------------------------------------------------------- 699 (732)
T KOG1050|consen 687 DMFEFISKAKDPE------------------------------------------------------------------- 699 (732)
T ss_pred HHHHHHhhccCCc-------------------------------------------------------------------
Confidence 9999997621100
Q ss_pred ccccCCCCCeEEEEECCCCCccceeeCCHHHHHHHHH
Q 002314 885 NVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLK 921 (937)
Q Consensus 885 ~~~~~~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~ 921 (937)
+..+.|+|+||.++|.|+|++.++.||..+|+
T Consensus 700 -----~~~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 700 -----KVEEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred -----ccceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 00368999999999999999999999999885
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-115 Score=991.59 Aligned_cols=450 Identities=36% Similarity=0.633 Sum_probs=417.3
Q ss_pred CcEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhh-cCceEEEEecCh
Q 002314 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDE 171 (937)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~-~~~~~~pV~l~~ 171 (937)
+||||||||+|+.. + . +.++|||++||.++ +..+|+||||+|....+ . . .+.... .++.|.||+|++
T Consensus 2 ~rLivVSNRlp~~~---~--~---~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~-~-~-~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 2 SRLVVVSNRIAPPD---E--H---KASAGGLAVGILGALKAAGGLWFGWSGETGNE-D-Q-PLKKVKKGNITWASFNLSE 70 (474)
T ss_pred CCEEEEECCCcCCC---C--C---CcCCCCcHHHHHHHHHhcCceEEEecCCCCCC-c-c-cchhhhcCCceEEEecCCH
Confidence 68999999999732 1 1 45789999999998 78899999999975332 1 1 122332 469999999999
Q ss_pred hhhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHH
Q 002314 172 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 250 (937)
Q Consensus 172 ~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr 250 (937)
+++++||+||||++|||+|||++... .|+ +.|++|++||++||++|++.+++||+|||||||||+||++||
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELR 142 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHH
Confidence 99999999999999999999995332 466 569999999999999999999999999999999999999999
Q ss_pred hhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeeEEE
Q 002314 251 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVA 329 (937)
Q Consensus 251 ~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~-~~v~~~gr~~~i~ 329 (937)
++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||.+++|++... ..+.++||.++|.
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~ 222 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTE 222 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999988643 4577889999999
Q ss_pred EEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCC
Q 002314 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (937)
Q Consensus 330 v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r 409 (937)
++|+|||++.|...+..+ +...++.++++++++++|++||||||+|||+++|+||++||++||+|++||+|+||+.|+|
T Consensus 223 ~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR 301 (474)
T PRK10117 223 VYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (474)
T ss_pred EEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC
Confidence 999999999999887655 5667889999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcC-CCCc
Q 002314 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKG 488 (937)
Q Consensus 410 ~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~-~~~g 488 (937)
+++++|++++++|+++|++||++||+.+|.||+|+.+.++++++.++|++|||+++||++||||||++||+|||. +++|
T Consensus 302 ~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~G 381 (474)
T PRK10117 302 GDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (474)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 7899
Q ss_pred eEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHH
Q 002314 489 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (937)
Q Consensus 489 ~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~ 564 (937)
+||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|++.++++|.+||+.+|+++||.+|..+..
T Consensus 382 vLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred cEEEecccchHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Confidence 99999999999999 7899999999999999999999999999999999999999999999999999999998754
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-113 Score=990.11 Aligned_cols=454 Identities=32% Similarity=0.607 Sum_probs=421.7
Q ss_pred EEcCCccceEecCCCc--EEEEecCCcHHHhcccc-c-cCCcEEEEeCCCCCCCchhh-HHHH-HhhcCceEEEEecChh
Q 002314 99 VANRLPVSAIRRGEDS--WSLEISAGGLVSALLGV-K-EFEARWIGWAGVNVPDEIGQ-KALT-KALAEKRCIPVFLDED 172 (937)
Q Consensus 99 vsnrlP~~~~~~~~~~--~~~~~~~ggl~~~l~~~-~-~~~~~Wvgw~g~~~~~~~~~-~~~~-~~~~~~~~~pV~l~~~ 172 (937)
||||||+.++++++|. |.+++++|||++||.++ + ..+|+||||+|...+++++. ..+. ....+++|.||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876665 77799999999999988 4 47799999999753221111 1111 2245799999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHh
Q 002314 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (937)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (937)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|++.++++|+|||||||||+||.+||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999985333 477 5699999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC--------------
Q 002314 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE-------------- 317 (937)
Q Consensus 252 ~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~-------------- 317 (937)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++...
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875332
Q ss_pred -------ceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 318 -------GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 318 -------~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
++.++||.++|.++|+|||++.|.+....+++.+.++.+|++++++++|++|||||++|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778999999999999999999999888888888899999999999999999999999999999999999999
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (937)
+||++++|++||||+.|+|+++++|++++++|+++|++||++||+.+|.||+|+.+.++.+++.+||++||||++||++|
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHH
Q 002314 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (937)
Q Consensus 471 G~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 550 (937)
|||||++||||||.+++||||+|||+|+++++ .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999999889999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002314 551 WAETFVSELND 561 (937)
Q Consensus 551 W~~~fl~~l~~ 561 (937)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998864
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-114 Score=995.11 Aligned_cols=462 Identities=54% Similarity=0.930 Sum_probs=356.5
Q ss_pred cEEEEEcCCccceEecC-CCc--EEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCch--hhHHHHHhhcCceEEEEe
Q 002314 95 RLLVVANRLPVSAIRRG-EDS--WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVF 168 (937)
Q Consensus 95 ~livvsnrlP~~~~~~~-~~~--~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~~pV~ 168 (937)
|||||||||||.+++++ +|. |+++.++|||+++|.++ +..+++||||+|...+.++ ++........+++|+|||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~ 81 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVF 81 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEE
Confidence 79999999999999876 666 88889999999999999 7799999999998776554 233345567899999999
Q ss_pred cChhhhhhhhhhhhhhccccccCCCCC-CccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHH
Q 002314 169 LDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (937)
Q Consensus 169 l~~~~~~~~Y~gf~n~~LWPlfH~~~~-~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp 246 (937)
|+++++++||+||||++|||+|||... .+ ....|+ +.|++|++||+.||++|++.+++||+|||||||||+||
T Consensus 82 l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-----~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 82 LSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-----DLARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp E-HHHHHHHTTTHHHHTHHHHHTT-GG---------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred cCHHHHHHHHHhhhhhccCccccccccccc-----ccchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 999999999999999999999999842 11 112466 56999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC--ceeeCCe
Q 002314 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGR 324 (937)
Q Consensus 247 ~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~--~v~~~gr 324 (937)
++||++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++... +++++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987655 7999999
Q ss_pred eeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcC-CcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEE
Q 002314 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (937)
Q Consensus 325 ~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvq 403 (937)
.++|.++|+|||++.|.+.+.++++.+..+.+++++++ +++|++|||+|++|||.++|+||++||++||+++++|+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999899999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 404 i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
|+.|+|+++++|++++++|+++|++||++||+.+|.||+|+.+.++.+++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 484 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
.+++|+||+|||+|++++|++++++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|+++||++|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999965789999999999999999999999999999999999999999999999999999873
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-109 Score=938.11 Aligned_cols=463 Identities=49% Similarity=0.852 Sum_probs=430.6
Q ss_pred CCCCCcEEEEEcCCccceEe-cCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 002314 90 TFSRQRLLVVANRLPVSAIR-RGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (937)
Q Consensus 90 ~~~~~~livvsnrlP~~~~~-~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (937)
.....|+|+||||+|+...+ .+++......++|||+++|.++ +..+++||||+|...+.++..........++...||
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v 90 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPV 90 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEEE
Confidence 34478999999999999863 3466788999999999999999 789999999999887632323445555679999999
Q ss_pred ecChhhhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHH
Q 002314 168 FLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (937)
Q Consensus 168 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp 246 (937)
+++.+++++||++|||++|||+|||+.... .|+ ..|+.|++||++||++|++.|++||+||||||||+++|
T Consensus 91 ~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P 162 (486)
T COG0380 91 ILSDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVP 162 (486)
T ss_pred ecCHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhH
Confidence 999999999999999999999999995333 366 55999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee---eCC
Q 002314 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQG 323 (937)
Q Consensus 247 ~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~---~~g 323 (937)
+|||++.|+++||||+|+|||++|+|+|||+|++|++|||+||+||||+++|++||+.+|+++++.. ....+. ++|
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~-~~~~~~~~~~~~ 241 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVT-GDADIRFNGADG 241 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccc-ccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999865 222333 447
Q ss_pred eeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcC-CcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEE
Q 002314 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (937)
Q Consensus 324 r~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv 402 (937)
+.+++.++|+|||+..|.....++.++.++.++++.+.+ +++|++|||||++||++++|+||++||++||+|++||+|+
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvli 321 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLL 321 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEE
Confidence 999999999999999999998888888889999998876 9999999999999999999999999999999999999999
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHh
Q 002314 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (937)
Q Consensus 403 qi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc 482 (937)
||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|++..++++++.+||++||++++||++||||||++||+||
T Consensus 322 Qi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~ 401 (486)
T COG0380 322 QIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAA 401 (486)
T ss_pred EecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
|.+++|+||+|||+|++.+| .+|++|||||.+++|++|.+||+|+.+||++|++.+++.|.+||+++|+.+|+.+|...
T Consensus 402 q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 402 QRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred hcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99889999999999999999 77999999999999999999999999999999999999999999999999999999863
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-104 Score=920.56 Aligned_cols=452 Identities=56% Similarity=0.926 Sum_probs=422.0
Q ss_pred cEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHH-HHhhcCceEEEEecChh
Q 002314 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKAL-TKALAEKRCIPVFLDED 172 (937)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~-~~~~~~~~~~pV~l~~~ 172 (937)
||||||||+|+.+.++ + +..++|||++||.++ +..+++||||+|...++++++..+ .....+++|+||||+++
T Consensus 1 ~livvsnr~p~~~~~~--~---~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 75 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG--G---LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEE 75 (456)
T ss_pred CEEEEECCCCccccCC--C---CCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHH
Confidence 6999999999988654 2 567899999999998 778999999999865543332223 34567899999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHh
Q 002314 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (937)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (937)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|+++++++|+|||||||||++|.+||+
T Consensus 76 ~~~~~y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 76 DVDGYYNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHh
Confidence 9999999999999999999995332 466 5699999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEE
Q 002314 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331 (937)
Q Consensus 252 ~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~ 331 (937)
+.|+++||||+|||||++|+|+++|+|++||+|||+||+|||||++|++||+++|.+++|++....++.+.|+.++|.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~vi 227 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAF 227 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred ecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCC
Q 002314 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (937)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~ 411 (937)
|+|||++.|.+....+++.+....+|++++++++|++|||+++.||++.+|+||++|++++|+++++++|+|+++|++++
T Consensus 228 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~ 307 (456)
T TIGR02400 228 PIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD 307 (456)
T ss_pred cCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC
Confidence 99999999998877777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEE
Q 002314 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (937)
Q Consensus 412 ~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lV 491 (937)
+++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||+....|+||
T Consensus 308 ~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vV 387 (456)
T TIGR02400 308 VPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLI 387 (456)
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976678899
Q ss_pred EeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHH
Q 002314 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 492 lSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 560 (937)
+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+||++|+++++++|.+||+.+|+++||.+|.
T Consensus 388 lS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 388 LSEFAGAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EeCCCCChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999 599999999999999999999999999999999999999999999999999998875
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-95 Score=848.40 Aligned_cols=456 Identities=54% Similarity=0.915 Sum_probs=425.6
Q ss_pred cEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChhh
Q 002314 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDI 173 (937)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~~ 173 (937)
||||||||+|+.++++++|.|+++.++|||+++|.++ +..+++||||+|...+.+++.........+|+|+|||+++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 6999999999999998889999999999999999998 778999999999877665544456677789999999999999
Q ss_pred hhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhh
Q 002314 174 VHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (937)
Q Consensus 174 ~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~ 252 (937)
++.||+||||++|||+|||++... .|+ +.|++|++||+.||++|.+.++++|+||||||||+++|.+||++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999985332 366 56999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeeEEEEE
Q 002314 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAF 331 (937)
Q Consensus 253 ~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~-~~v~~~gr~~~i~v~ 331 (937)
.++++||||+|||||++|+|+++|++++|+++|++||+||||+++|++||+++|+++++++... ..++++|+.++|.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999988654 678999999999999
Q ss_pred ecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCC
Q 002314 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (937)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~ 411 (937)
|+|||++.|.+....++..+.+.+++..+.++++|++|||+++.||+..+|+||++|++++|+++++++|+|+|.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999998766666655666677777889999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEE
Q 002314 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (937)
Q Consensus 412 ~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lV 491 (937)
+++|.++++++++++++||.+||..+|.||+++.+.++.+++.++|+.|||||+||++||||||++|||||+..++|+||
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999977788999
Q ss_pred EeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHH
Q 002314 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 492 lSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 559 (937)
+|+++|+++++ .+|++|||+|++++|++|.++|+|+++|++.++++++++|.+||+..|+++|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999985 89999999999999999999999999999999999999999999999999999886
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=347.96 Aligned_cols=252 Identities=30% Similarity=0.456 Sum_probs=217.3
Q ss_pred cchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002314 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (937)
Q Consensus 577 L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 656 (937)
+....+.+.|..+++++||+||||||+++..+| ..+.++++++++|++|+++++|.|+|+|||+..+++++
T Consensus 4 ~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~ 74 (266)
T COG1877 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERL 74 (266)
T ss_pred hhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHh
Confidence 455667788999999999999999999999999 68899999999999999999999999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHH
Q 002314 657 FQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 736 (937)
Q Consensus 657 ~~~~~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~e 736 (937)
++..+++++|+||++++..++.|.....+..++.|++.+.++++++++++||+++|.|+++++||||+++++....++..
T Consensus 75 ~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~ 154 (266)
T COG1877 75 FGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALA 154 (266)
T ss_pred cCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHH
Confidence 99779999999999997655554333335677889999999999999999999999999999999999977665544444
Q ss_pred HHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCC
Q 002314 737 MLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPD 816 (937)
Q Consensus 737 l~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~ 816 (937)
..... . ....++++.||++|||+|.++|||.|+++++++.+++ .++++|+|| |.|||+||++++.
T Consensus 155 ~~~~~-~---~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~------~~~~~~aGD-D~TDE~~F~~v~~---- 219 (266)
T COG1877 155 EAATL-I---NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD------GRFPIFAGD-DLTDEDAFAAVNK---- 219 (266)
T ss_pred HHHhc-c---ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC------CCcceecCC-CCccHHHHHhhcc----
Confidence 33332 1 1112899999999999999999999999999998742 258899999 9999999999975
Q ss_pred CCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEE
Q 002314 817 DGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFS 896 (937)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (937)
...++
T Consensus 220 ---------------------------------------------------------------------------~~~~~ 224 (266)
T COG1877 220 ---------------------------------------------------------------------------LDSIT 224 (266)
T ss_pred ---------------------------------------------------------------------------CCCce
Confidence 13689
Q ss_pred EEECCCCCccceeeCCHHHHHHHHHHhhhcc
Q 002314 897 CAVGRPRTNARFLLQSSDEVVSFLKKLADAS 927 (937)
Q Consensus 897 ~~VG~~~t~A~y~l~~~~~V~~~L~~La~~~ 927 (937)
++||.+.|+|.|++.++..+..+|..+....
T Consensus 225 v~v~~~~t~a~~~~~~~~~~~~~l~~~~~~~ 255 (266)
T COG1877 225 VKVGVGSTQAKFRLAGVYGFLRSLYKLLEAL 255 (266)
T ss_pred EEecCCcccccccccccHHHHHHHHHHHHHh
Confidence 9999999999999999999999999987654
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=357.11 Aligned_cols=245 Identities=20% Similarity=0.330 Sum_probs=196.8
Q ss_pred HHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceE
Q 002314 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWL 664 (937)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~l 664 (937)
....+++++|||||||||+|++++| +.+.++++++++|++|++ +..|+|+|||++..++++++..++++
T Consensus 92 ~~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~l 160 (354)
T PLN02151 92 HKSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELYY 160 (354)
T ss_pred HhhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccceE
Confidence 3466788999999999999999999 678999999999999996 46899999999999999999779999
Q ss_pred EeeCceEEEecC--Ceeeec---cccccChhHHHHHHHHHHHH---HhcCCCceeeeecceEEEEeeccChhhhHHHHHH
Q 002314 665 AAENGMFLRCTT--GKWMTT---MPEHLNMEWVDSLKHVFEYF---TERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 736 (937)
Q Consensus 665 iaenG~~ir~~~--~~w~~~---~~~~~~~~w~~~v~~il~~~---~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~e 736 (937)
+|+||++++.++ ..|+.. .....+..|...+.++++.+ ++++||+++|+|+++++||||+++++.. .+
T Consensus 161 aGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~----~~ 236 (354)
T PLN02151 161 AGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKW----SD 236 (354)
T ss_pred EEeCCceeecCCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHH----HH
Confidence 999999998532 245310 00123556777776666554 5789999999999999999999976522 23
Q ss_pred HHHHHhcCCCCCC-CeEEEEcCeEEEEEEC-CCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCC
Q 002314 737 MLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPEL 814 (937)
Q Consensus 737 l~~~L~~~~~~~~-~v~v~~Gk~~vEV~p~-gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~ 814 (937)
+..++ ..++.+. .+.++.|++++||+|. ++|||.||++||+.+++. + ...++++|||| |.|||+||++++..
T Consensus 237 l~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~--~-~~~~~pvyiGD-D~TDEDaF~~L~~~- 310 (354)
T PLN02151 237 LANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYA--N-CTDVFPIYIGD-DRTDEDAFKILRDK- 310 (354)
T ss_pred HHHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccc--c-CCCCeEEEEcC-CCcHHHHHHHHhhc-
Confidence 33333 3333343 4899999999999995 999999999999998752 1 12468999999 99999999999641
Q ss_pred CCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCe
Q 002314 815 PDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENY 894 (937)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (937)
..+
T Consensus 311 -----------------------------------------------------------------------------~~G 313 (354)
T PLN02151 311 -----------------------------------------------------------------------------KQG 313 (354)
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 136
Q ss_pred EEEEEC--CCCCccceeeCCHHHHHHHHHHhhhcc
Q 002314 895 FSCAVG--RPRTNARFLLQSSDEVVSFLKKLADAS 927 (937)
Q Consensus 895 ~~~~VG--~~~t~A~y~l~~~~~V~~~L~~La~~~ 927 (937)
++|+|| .++|.|+|+|+||++|..||+.|+...
T Consensus 314 ~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~ 348 (354)
T PLN02151 314 LGILVSKYAKETNASYSLQEPDEVMEFLERLVEWK 348 (354)
T ss_pred ccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhh
Confidence 788887 689999999999999999999998753
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=354.21 Aligned_cols=253 Identities=19% Similarity=0.305 Sum_probs=199.9
Q ss_pred cchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002314 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (937)
Q Consensus 577 L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 656 (937)
|+.-+-+.++...++.+|||||||||+|++++| +.+.++++++++|++|++ +..|+|+|||++..+.++
T Consensus 97 l~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 97 LEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred HHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHh
Confidence 443344455667788999999999999999888 456899999999999994 689999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeeec------cccccChhHHHHHHHH---HHHHHhcCCCceeeeecceEEEEeeccCh
Q 002314 657 FQEYNLWLAAENGMFLRCTTGKWMTT------MPEHLNMEWVDSLKHV---FEYFTERTPRSHFEQRETSLVWNYKYADV 727 (937)
Q Consensus 657 ~~~~~l~liaenG~~ir~~~~~w~~~------~~~~~~~~w~~~v~~i---l~~~~~~~~Gs~iE~K~~sl~~hyr~ad~ 727 (937)
++..++++||+||++++.+++.|... ........|+..+.++ ++.+++++||++||+|+++++||||++++
T Consensus 166 ~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~ 245 (366)
T PLN03017 166 VKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDE 245 (366)
T ss_pred hcccCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCH
Confidence 77667899999999998644443210 0011233466555555 66778899999999999999999999987
Q ss_pred hhhHHHHHHHHHHHhcCCCCCC-CeEEEEcCeEEEEEEC-CCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHH
Q 002314 728 EFGRIQARDMLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDED 805 (937)
Q Consensus 728 e~~~~~a~el~~~L~~~~~~~~-~v~v~~Gk~~vEV~p~-gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEd 805 (937)
+.. .++..++ ..++.+. .++++.|++++||+|. ++|||.||++||+.+++.. .+.++++|||| |.|||+
T Consensus 246 ~~~----~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDED 316 (366)
T PLN03017 246 KKW----SELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDED 316 (366)
T ss_pred HHH----HHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccHH
Confidence 542 2333333 3333333 4899999999999994 9999999999999988531 12468999999 999999
Q ss_pred HHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 002314 806 VYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYN 885 (937)
Q Consensus 806 Mf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (937)
||++++..
T Consensus 317 aF~~L~~~------------------------------------------------------------------------ 324 (366)
T PLN03017 317 AFKMLRDR------------------------------------------------------------------------ 324 (366)
T ss_pred HHHHHhhc------------------------------------------------------------------------
Confidence 99999640
Q ss_pred cccCCCCCeEEEEEC--CCCCccceeeCCHHHHHHHHHHhhhcc
Q 002314 886 VLDLNKENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADAS 927 (937)
Q Consensus 886 ~~~~~~~~~~~~~VG--~~~t~A~y~l~~~~~V~~~L~~La~~~ 927 (937)
..+|+|+|| .++|.|+|+|+||++|..||+.|++..
T Consensus 325 ------~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~ 362 (366)
T PLN03017 325 ------GEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK 362 (366)
T ss_pred ------CCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence 137999999 589999999999999999999998754
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=355.26 Aligned_cols=246 Identities=20% Similarity=0.298 Sum_probs=198.3
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
+.+|+++++++|||||||||++++++| +.+.++++++++|++|+++ ..|+|||||++++|+++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 457899999999999999999999999 7899999999999999986 47999999999999999998899
Q ss_pred eEEeeCceEEEecCC-----eeeecc-----------ccccChhHHHHHHHHHH---HHHhcCCCceeeeecceEEEEee
Q 002314 663 WLAAENGMFLRCTTG-----KWMTTM-----------PEHLNMEWVDSLKHVFE---YFTERTPRSHFEQRETSLVWNYK 723 (937)
Q Consensus 663 ~liaenG~~ir~~~~-----~w~~~~-----------~~~~~~~w~~~v~~il~---~~~~~~~Gs~iE~K~~sl~~hyr 723 (937)
+++|+||++++...+ .|...+ ......+|...+.++++ .+++++||++||+|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 999999999974211 121110 00124567755555544 46777899999999999999999
Q ss_pred ccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEE-CCCCHHHHHHHHHHHhcccccCCCCCc--eEEEEecCC
Q 002314 724 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAID--YVLCIGHFL 800 (937)
Q Consensus 724 ~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p-~gvnKG~Av~~Ll~~l~~~~~~~~~~d--~vl~iGD~d 800 (937)
+++++++..++.++...+ .. ...+.++.|++++||+| .++|||.||++|++++++. ..+ .++|||| |
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~---~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~-----~~d~~~pi~iGD-D 329 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KK---YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLS-----NCDDVLPIYIGD-D 329 (384)
T ss_pred CCCchHHHHHHHHHHHHH-Hh---CCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCC-----cccceeEEEECC-C
Confidence 998776665666665555 22 12488999999999999 5999999999999998842 122 3599999 9
Q ss_pred CCcHHHHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002314 801 GKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSD 880 (937)
Q Consensus 801 ~nDEdMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (937)
.|||+||++++..
T Consensus 330 ~TDedmF~~L~~~------------------------------------------------------------------- 342 (384)
T PLN02580 330 RTDEDAFKVLREG------------------------------------------------------------------- 342 (384)
T ss_pred chHHHHHHhhhcc-------------------------------------------------------------------
Confidence 9999999998641
Q ss_pred CCccccccCCCCCeEEEEEC--CCCCccceeeCCHHHHHHHHHHhhhcc
Q 002314 881 KTSYNVLDLNKENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADAS 927 (937)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~VG--~~~t~A~y~l~~~~~V~~~L~~La~~~ 927 (937)
..+++|+|| .++|.|+|+|+||+||..||+.|+...
T Consensus 343 -----------~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 343 -----------NRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred -----------CCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 125777776 589999999999999999999998754
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=365.96 Aligned_cols=528 Identities=14% Similarity=0.162 Sum_probs=335.0
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhc-----------------cCccchHH-HHhhhcCCEEEE
Q 002314 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----------------TLPSRSDL-LRAVLAADLVGF 293 (937)
Q Consensus 232 ~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr-----------------~lp~r~ei-l~~ll~aDlIgF 293 (937)
+|+||.|+++--.++..|++.. ++|++++.|.. ..+-++ .++.|-+. -..+-.||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 6999999999889999888865 89999999963 112111 01222221 234567999998
Q ss_pred eCHHHHHHHHHHH-------HHHhCcccCCCceeeCCe-eeEEEEEecccChhhhhhhhcCCchH-------------HH
Q 002314 294 HTYDYARHFVSAC-------TRILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPVQ-------------VH 352 (937)
Q Consensus 294 ~t~~~~~~Fl~~~-------~r~lg~~~~~~~v~~~gr-~~~i~v~P~GID~~~f~~~~~~~~~~-------------~~ 352 (937)
.|......-...- .+.|.. ....++..+|+ ..++.|||+|||++.|.+.....+.. ..
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 8876655432210 011100 01123333332 34899999999999998742211100 01
Q ss_pred HHHHHHHh--cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHH----HHHHHHHHHHH
Q 002314 353 IKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY----QRLTSQVHEIV 426 (937)
Q Consensus 353 ~~~lr~~~--~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y----~~l~~~l~~lv 426 (937)
...++..+ +++++||+|||+++.||+..+|+||..+.+..+.. ++.| ++|... +.++. .....++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHH
Confidence 12344333 47789999999999999999999999986543321 2333 344321 11111 12334566666
Q ss_pred HHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc
Q 002314 427 GRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 502 (937)
Q Consensus 427 ~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l 502 (937)
.+.+- .+ .|. |.|.++.+++..+|+.| ||||+||++||||++++|||||+ .|+|+|..+|..+.+
T Consensus 542 ~~lgL----~g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII 610 (1050)
T TIGR02468 542 DKYDL----YG--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIH 610 (1050)
T ss_pred HHhCC----CC--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHh
Confidence 55432 22 355 47899999999999998 69999999999999999999994 799999999988887
Q ss_pred --CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHHHh-hhcccc------C
Q 002314 503 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEA-QLRIKQ------V 573 (937)
Q Consensus 503 --g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~~-~~~~~~------~ 573 (937)
|.+|++|+|.|++++|++|.++|+.+ +.++++..++++.+..|+|...+++++..+..+...+ +.+... .
T Consensus 611 ~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~ 689 (1050)
T TIGR02468 611 RVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEAS 689 (1050)
T ss_pred ccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 67899999999999999999999854 4666677788888999999999999998887764332 111000 0
Q ss_pred ---CCC-------------------------------cc-------hHHHHHHHH----------------------hcC
Q 002314 574 ---PPS-------------------------------LR-------EADSIERYL----------------------RSN 590 (937)
Q Consensus 574 ---~~~-------------------------------L~-------~~~~~~~y~----------------------~s~ 590 (937)
.+. ++ +...+.... ...
T Consensus 690 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1050)
T TIGR02468 690 EDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRR 769 (1050)
T ss_pred cccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccccc
Confidence 000 00 011111111 112
Q ss_pred CeEEE--EecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhh---cCCCCeEEEEcCCChhhHHHHhcccC----
Q 002314 591 NRLLI--LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALC---HDPKTTIVVLSGSDRNVLDKNFQEYN---- 661 (937)
Q Consensus 591 ~rLI~--lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~---~d~g~~V~IvSGR~~~~L~~~~~~~~---- 661 (937)
++||+ +|+|+| +.. .+.+.++++.+. ......++++|||++..+.+++...+
T Consensus 770 ~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~ 830 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPT 830 (1050)
T ss_pred ceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 45666 899999 221 123344444443 22347789999999999999886653
Q ss_pred --ceEEeeCceEEEecC------Ceeeec--cccccChhH-HHHHHHHHHHHHhcC--------CCceeeeecce--EEE
Q 002314 662 --LWLAAENGMFLRCTT------GKWMTT--MPEHLNMEW-VDSLKHVFEYFTERT--------PRSHFEQRETS--LVW 720 (937)
Q Consensus 662 --l~liaenG~~ir~~~------~~w~~~--~~~~~~~~w-~~~v~~il~~~~~~~--------~Gs~iE~K~~s--l~~ 720 (937)
..+||.-|++|+... ..|..- ....++..| .+.+...+..+.... ++...+....+ ..+
T Consensus 831 ~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~ 910 (1050)
T TIGR02468 831 DFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCY 910 (1050)
T ss_pred CCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceE
Confidence 358999999998641 222210 001234566 344665555554321 33444443322 223
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEE--cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceE-EEEe
Q 002314 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ--GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV-LCIG 797 (937)
Q Consensus 721 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~--Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~v-l~iG 797 (937)
.|.-.|++.. ...+++.+.| .. ....++++. +...++|.|..+|||.||++|+.+++ +|.+.+ +++|
T Consensus 911 SY~v~d~~~~-~~v~elr~~L-r~--~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~VfaG 980 (1050)
T TIGR02468 911 AFKVKDPSKV-PPVKELRKLL-RI--QGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFVG 980 (1050)
T ss_pred EEEecCcccC-ccHHHHHHHH-Hh--CCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEec
Confidence 3321232221 1235566666 22 122344443 35799999999999999999999998 678888 6699
Q ss_pred cCCCC-c-HHHHHhc
Q 002314 798 HFLGK-D-EDVYAFF 810 (937)
Q Consensus 798 D~d~n-D-EdMf~~~ 810 (937)
| +.| | |+|+.-+
T Consensus 981 d-SGntD~e~Ll~G~ 994 (1050)
T TIGR02468 981 E-SGDTDYEGLLGGL 994 (1050)
T ss_pred c-CCCCCHHHHhCCc
Confidence 9 888 9 6665443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=347.92 Aligned_cols=203 Identities=36% Similarity=0.603 Sum_probs=147.3
Q ss_pred EEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCceEEEe
Q 002314 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 674 (937)
Q Consensus 595 ~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~ir~ 674 (937)
||||||||+++.++| +.+.++++++++|++|++++++.|+|+|||++.+++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999999988 68899999999999999999999999999999997777776689999999999998
Q ss_pred cCC-eeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC-CCeE
Q 002314 675 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVE 752 (937)
Q Consensus 675 ~~~-~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~-~~v~ 752 (937)
+++ .|.... ...+..|++.+.++++++++++||+++|+|+++++||||+++++++..++.++.+++ .+.+.. .+++
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNLP-ADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-TT-GGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Cccccccccc-cccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 665 454322 456778999999999999999999999999999999999999998887888888887 443333 4799
Q ss_pred EEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 753 v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
++.|+++|||+|.+++||.|+++|+++++.. ..+.++++|+|| |.|||+||++++.
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~---~~~~~~~l~~GD-D~tDE~~f~~~~~ 205 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFA---GPKPDFVLYIGD-DRTDEDAFRALRE 205 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHHHHTTTT
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCcc---ccccceeEEecC-CCCCHHHHHHHHh
Confidence 9999999999999999999999999998731 123689999999 9999999999976
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=324.76 Aligned_cols=238 Identities=24% Similarity=0.360 Sum_probs=202.0
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeC
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaen 668 (937)
+++++|||||||||++..++| ..+.++++++++|++|++++++.|+|+|||++.++...+...+++++|+|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999998888 56889999999999999999999999999999999887766689999999
Q ss_pred ceEEEecCC--eeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeecc-ChhhhHHHHHHHHHHHhcCC
Q 002314 669 GMFLRCTTG--KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYA-DVEFGRIQARDMLQHLWTGP 745 (937)
Q Consensus 669 G~~ir~~~~--~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~a-d~e~~~~~a~el~~~L~~~~ 745 (937)
|++++.++. .|... ......|++.+.++++++.++ ||+++|+|+++++||||.+ +++++..++.++..++ .
T Consensus 72 G~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~-- 145 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNL--TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-L-- 145 (244)
T ss_pred CEEEecCCCcceeeec--hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-h--
Confidence 999986322 24332 122257888888888888887 9999999999999999999 7888877787877766 2
Q ss_pred CCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCC
Q 002314 746 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTR 825 (937)
Q Consensus 746 ~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~ 825 (937)
...++.++.|+.++|++|.++|||.|+++++++++ ...++++|||| +.||++||+.++.. .
T Consensus 146 -~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~~~~~~~~-~---------- 206 (244)
T TIGR00685 146 -SFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDAFRVVNNQ-W---------- 206 (244)
T ss_pred -cCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHHHHHHhcc-c----------
Confidence 23468899999999999999999999999999987 34688999999 99999999998431 0
Q ss_pred CCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEEEEE--CCCC
Q 002314 826 PTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAV--GRPR 903 (937)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--G~~~ 903 (937)
...++++|+| |..+
T Consensus 207 ----------------------------------------------------------------~~~g~~~v~v~~g~~~ 222 (244)
T TIGR00685 207 ----------------------------------------------------------------GNYGFYPVPIGSGSKK 222 (244)
T ss_pred ----------------------------------------------------------------CCCCeEEEEEecCCcC
Confidence 0025799999 8889
Q ss_pred CccceeeCCHHHHHHHHHHhh
Q 002314 904 TNARFLLQSSDEVVSFLKKLA 924 (937)
Q Consensus 904 t~A~y~l~~~~~V~~~L~~La 924 (937)
|.|.|+++++++|..+|+.|+
T Consensus 223 ~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 223 TVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCceEeCCCHHHHHHHHHHHh
Confidence 999999999999999999986
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-36 Score=324.19 Aligned_cols=237 Identities=22% Similarity=0.240 Sum_probs=197.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG 669 (937)
++++||+||||||++...+| ++..++++++++|++|++++++.|+|+|||+...+.++++.+++.++|+||
T Consensus 13 ~~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nG 83 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHG 83 (266)
T ss_pred CCEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCC
Confidence 36899999999999998888 567899999999999998789999999999999999999988888999999
Q ss_pred eEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCC
Q 002314 670 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 749 (937)
Q Consensus 670 ~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~ 749 (937)
++++..++.|.. ...+.+|...+.+.++.+..++||+++|.|+.+++|||+.++.+ .....++.+.+ .+...
T Consensus 84 a~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i-~~~~~-- 155 (266)
T PRK10187 84 AERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRI-TQIWP-- 155 (266)
T ss_pred CeeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHH-HhhCC--
Confidence 999864444422 22455677777788888888999999999999999999977422 11223343344 22121
Q ss_pred CeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCCCCCC
Q 002314 750 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDA 829 (937)
Q Consensus 750 ~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~~~~~ 829 (937)
.+.+..|+.++||+|.++|||.||++|+++++ +..++++|||| +.|||+||+++..
T Consensus 156 ~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~mf~~~~~----------------- 211 (266)
T PRK10187 156 QLALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAGFAVVNR----------------- 211 (266)
T ss_pred ceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHHHHHHHh-----------------
Confidence 36677899999999999999999999999998 45789999999 9999999999954
Q ss_pred cCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEEEEECCCCCcccee
Q 002314 830 IKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFL 909 (937)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~t~A~y~ 909 (937)
.++++|+||.+.|.|.|+
T Consensus 212 --------------------------------------------------------------~~g~~vavg~a~~~A~~~ 229 (266)
T PRK10187 212 --------------------------------------------------------------LGGISVKVGTGATQASWR 229 (266)
T ss_pred --------------------------------------------------------------cCCeEEEECCCCCcCeEe
Confidence 247999999999999999
Q ss_pred eCCHHHHHHHHHHhhhccCc
Q 002314 910 LQSSDEVVSFLKKLADASSS 929 (937)
Q Consensus 910 l~~~~~V~~~L~~La~~~~~ 929 (937)
|++|++|.+||+.|+.....
T Consensus 230 l~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 230 LAGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred CCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999987664
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-25 Score=252.17 Aligned_cols=300 Identities=22% Similarity=0.204 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCC
Q 002314 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 289 (937)
Q Consensus 210 ~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aD 289 (937)
.+..|...++.++..+... ...|+||+|+++.+.++...+. .++|+++++|+++.... . ..+..+...+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPLLD-LDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhcccccc-CCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHHhCC
Confidence 4677777777776653222 2569999999998777666543 36889999999875321 1 01122334445678
Q ss_pred EEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEE
Q 002314 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVM 366 (937)
Q Consensus 290 lIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iI 366 (937)
.+.+.+.++++. .+ . ..++ ++|+|||+........ .......+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~----------------~~--~--~~~~-vipngvd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPP----------------QV--P--PRKV-IIPPSIDPLSGKNREL---SPADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCC----------------CC--C--CceE-EeCCCCCCCccccCCC---CHHHHHHHHHHhCCCCCCcEE
Confidence 777665332211 01 1 1233 8999999753211111 112334556666 377899
Q ss_pred EEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 002314 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (937)
Q Consensus 367 L~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~ 446 (937)
++|||+++.||++.+++||..+.+++|+++ |+++|.+... .+++.++.++ +.++.+. . ..|.++..
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~---~~~~~~~----~--~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEE---VLEYAEG----D--PDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHH---HHHHhCC----C--CCeEEEec
Confidence 999999999999999999999988878754 8878754321 1223333233 2222211 1 23665443
Q ss_pred C-CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHH
Q 002314 447 S-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 523 (937)
Q Consensus 447 ~-v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~ 523 (937)
. ++.+++.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 3 489999999999999999999999999999999994 799999999988877 678999874 5688999999
Q ss_pred HHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHHH
Q 002314 524 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (937)
Q Consensus 524 aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 561 (937)
+++++ +++.++.+++++++ ..|+|...+++++..+++
T Consensus 334 ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99864 56777788888887 689999999999887764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-24 Score=246.71 Aligned_cols=273 Identities=18% Similarity=0.214 Sum_probs=203.4
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
...|+||+|+.. .+...++++.|++++.+.+|..|.. +.+ -.++.|.+.+... ..++. ..
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~~~-~~~~~---~~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQFL-KKFYE---ER 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCHHH-HHHHH---hh
Confidence 357999999843 3445667778999999999987531 111 1357777766533 33322 11
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHHHHH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af~ 386 (937)
+...++.++|+|||.+.|.+.. ...+++++ .++++|+++||+.+.||+..+++|+.
T Consensus 158 -------------~~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 -------------LPNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -------------CCCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1124578999999998886421 11233444 26788999999999999999999999
Q ss_pred HhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002314 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (937)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (937)
++.+++|+++ |+++|.+......+...+.+++++++.+++. .|+ +.|.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 9998888754 8888865422222233556677777665442 355 47889999999999999999999
Q ss_pred CC-CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceE-EECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh
Q 002314 467 SL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (937)
Q Consensus 467 Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gl-lVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (937)
|. .||||++++|||||+ .|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.++++++. +.++.++++++
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 97 499999999999994 789999988888877 56787 6789999999999999998763 45677777766
Q ss_pred h-hcCCHHHHHHHHHHHHHHh
Q 002314 543 V-TTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 543 V-~~~~~~~W~~~fl~~l~~~ 562 (937)
+ ++|+|..-++++++.|+..
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHHh
Confidence 5 7899999999998887653
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-24 Score=260.33 Aligned_cols=322 Identities=16% Similarity=0.185 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhh-----CCCCeEEEEEccC-----CCchhhh-ccCccc
Q 002314 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTP-----FPSSEIH-RTLPSR 278 (937)
Q Consensus 210 ~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~-----~~~~~I~~flH~P-----fPs~e~f-r~lp~r 278 (937)
....|.-+.++.++.+.+.-..+||||+||||..++|.++++. +.++++.|++|.- ||...+- ..+|+.
T Consensus 589 n~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~ 668 (977)
T PLN02939 589 DFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVH 668 (977)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHH
Confidence 3455555666666666554346799999999999985554432 3568999999984 3321111 112211
Q ss_pred ----------------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhh
Q 002314 279 ----------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIR 342 (937)
Q Consensus 279 ----------------~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~ 342 (937)
.-+..++..||.|..-++.|++.-+. ..--|++. .+..+..++.+||||||++.|.+
T Consensus 669 ~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnP 741 (977)
T PLN02939 669 QLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNP 741 (977)
T ss_pred HccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCC
Confidence 11234677899999999999887554 11111110 02235678899999999999986
Q ss_pred hhcC--------Cch---HHHHHHHHHHhc------CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEE
Q 002314 343 ALEI--------NPV---QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (937)
Q Consensus 343 ~~~~--------~~~---~~~~~~lr~~~~------~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~ 405 (937)
.... ... ......++++++ +.++|++|||+.+.||++.+++|+..+++ ++ +.||++|
T Consensus 742 atD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvG 815 (977)
T PLN02939 742 STDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLG 815 (977)
T ss_pred ccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEe
Confidence 5310 000 012345777773 35799999999999999999999998875 23 4577776
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCC
Q 002314 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (937)
Q Consensus 406 ~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~ 485 (937)
.+ ++ ..+++++++++.+++. . ..|.| .+.++......+|+.||+||+||.+|||||+.+|||+|+
T Consensus 816 dG-----p~-~~~e~eL~~La~~l~l----~--drV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG-- 880 (977)
T PLN02939 816 SS-----PV-PHIQREFEGIADQFQS----N--NNIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG-- 880 (977)
T ss_pred CC-----Cc-HHHHHHHHHHHHHcCC----C--CeEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC--
Confidence 32 21 1345566677766432 1 13665 567787778899999999999999999999999999994
Q ss_pred CCceEEEeCCCCccccc-----------CCceEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHhhhhhhhcCCHHHH
Q 002314 486 KKGVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEW 551 (937)
Q Consensus 486 ~~g~lVlSe~aG~~~~l-----------g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~V~~~~~~~W 551 (937)
.|+|++..+|..+.+ |.+|++|+|.|+++++++|.+++. ..++.+.++..+. ....|+|...
T Consensus 881 --tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~ 956 (977)
T PLN02939 881 --SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSS 956 (977)
T ss_pred --CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHH
Confidence 699999999988765 247999999999999999999986 2344455444432 3467999999
Q ss_pred HHHHHHHHHHhH
Q 002314 552 AETFVSELNDTV 563 (937)
Q Consensus 552 ~~~fl~~l~~~~ 563 (937)
++.++.-...+.
T Consensus 957 A~qYeeLY~~ll 968 (977)
T PLN02939 957 ASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHHH
Confidence 999987766654
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-24 Score=253.15 Aligned_cols=311 Identities=23% Similarity=0.263 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhC----CCCeEEEEEccCC-Cc---hhhhcc--Ccc--------
Q 002314 216 KANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPF-PS---SEIHRT--LPS-------- 277 (937)
Q Consensus 216 ~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~----~~~~I~~flH~Pf-Ps---~e~fr~--lp~-------- 277 (937)
-+++...+.+...-..+|+||+||||-.++|.++++.. .+.|++++.|..- .. .+.+.. +|+
T Consensus 103 ~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 182 (466)
T PRK00654 103 FFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGL 182 (466)
T ss_pred HHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhh
Confidence 34444444433332367999999999999999998653 4689999999862 10 111111 110
Q ss_pred -----chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeeEEEEEecccChhhhhhhhcCC---
Q 002314 278 -----RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN--- 347 (937)
Q Consensus 278 -----r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~--~~gr~~~i~v~P~GID~~~f~~~~~~~--- 347 (937)
..-+..++..||.|...++.+++..... ..| .++. +..+..++.+||||||.+.|.+.....
T Consensus 183 ~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~ 254 (466)
T PRK00654 183 EFYGQISFLKAGLYYADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAA 254 (466)
T ss_pred hcCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCccccc
Confidence 1112335667788777777665543210 000 0010 112345789999999999987642100
Q ss_pred --------chHHHHHHHHHHhc----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHH
Q 002314 348 --------PVQVHIKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY 415 (937)
Q Consensus 348 --------~~~~~~~~lr~~~~----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y 415 (937)
...+..+.++++++ +.++|++|||+++.||++.+++|+++++++ + +.|+++|.+ + +
T Consensus 255 ~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g---~-~-- 322 (466)
T PRK00654 255 NYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG---D-P-- 322 (466)
T ss_pred ccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC---c-H--
Confidence 01122345666663 567999999999999999999999998754 2 457777632 1 1
Q ss_pred HHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC
Q 002314 416 QRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF 495 (937)
Q Consensus 416 ~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~ 495 (937)
.+++++++++.+.+. .+.++.+. +.+.+..+|+.||+||+||.+||||++.+|||+|+ .|+|+|..
T Consensus 323 -~~~~~l~~l~~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~ 388 (466)
T PRK00654 323 -ELEEAFRALAARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRT 388 (466)
T ss_pred -HHHHHHHHHHHHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCC
Confidence 244566677665432 24444454 66667899999999999999999999999999994 79999999
Q ss_pred CCccccc--C------CceEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 496 AGAAQSL--G------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 496 aG~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
+|..+.+ + .+|++|+|.|+++++++|.++++. .++.+.++..+.+ ...++|..-++++++-.+++
T Consensus 389 gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 389 GGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9998887 4 579999999999999999999863 2233444444333 26789999888887766544
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-24 Score=262.04 Aligned_cols=311 Identities=14% Similarity=0.125 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhh-----CCCCeEEEEEccCCCchhhhccCccchHHHH
Q 002314 209 SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR 283 (937)
Q Consensus 209 ~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~-----~~~~~I~~flH~PfPs~e~fr~lp~r~eil~ 283 (937)
+...-|..++++.++.+.+.-..+||||+||||-.++|.++++. ..++|+++++|..- | ....+-.
T Consensus 687 Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~lk~ 757 (1036)
T PLN02316 687 NDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHIGK 757 (1036)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHHHH
Confidence 34556666677777766554446799999999999999999874 35789999999642 1 1122445
Q ss_pred hhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcC--C-----c----h-HH
Q 002314 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--N-----P----V-QV 351 (937)
Q Consensus 284 ~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~--~-----~----~-~~ 351 (937)
++..||.|..-++.|++..+.. + . ...+..++.+||+|||++.|.+.... + + . ..
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~-----~------~--l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~ 824 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN-----S------A--IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRA 824 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc-----c------C--cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhh
Confidence 7778999999999887765430 0 0 11234678899999999988764210 0 0 0 11
Q ss_pred HHHHHHHHhc----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q 002314 352 HIKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG 427 (937)
Q Consensus 352 ~~~~lr~~~~----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~ 427 (937)
....++++++ +.++|++||||.+.||+..+++|+.++++. + +.||++|.+ ++ ..++.++++++.
T Consensus 825 ~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~G-----pd-~~~e~~l~~La~ 892 (1036)
T PLN02316 825 AKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSA-----PD-PRIQNDFVNLAN 892 (1036)
T ss_pred hHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCC-----CC-HHHHHHHHHHHH
Confidence 2345677763 568999999999999999999999998863 2 446767632 22 134567777777
Q ss_pred HhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--C--
Q 002314 428 RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G-- 503 (937)
Q Consensus 428 ~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g-- 503 (937)
+++..+. ..|.| .+..+......+|+.||+||+||.+|||||+.+|||+|+ .|+|++..+|..+.+ +
T Consensus 893 ~Lg~~~~----~rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~ 963 (1036)
T PLN02316 893 QLHSSHH----DRARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDH 963 (1036)
T ss_pred HhCccCC----CeEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhcccccc
Confidence 6654332 13554 344554444589999999999999999999999999994 689999999999887 2
Q ss_pred -----------CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHHHh
Q 002314 504 -----------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 504 -----------~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~~ 562 (937)
.+|++|+|.|+++++++|.++|....+.+..+....++.+ ..++|..-+++++.-.+.+
T Consensus 964 ~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 964 DKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred ccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 3799999999999999999999865333333334444444 5699999999998776654
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=251.50 Aligned_cols=315 Identities=15% Similarity=0.187 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchh--hhc------------cCc
Q 002314 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLP 276 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e--~fr------------~lp 276 (937)
|.....+...+...+.+.....|+||+|+++..++..++++.. ++|++++.|....... +.. .+.
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNIS 172 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchH
Confidence 4333444444545444433356999999988777777776644 6899999997532110 000 001
Q ss_pred cch-HHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCC-eeeEEEEEecccChhhhhhhhcCCchHHHHH
Q 002314 277 SRS-DLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQG-RLTRVAAFPIGIDSERFIRALEINPVQVHIK 354 (937)
Q Consensus 277 ~r~-eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~g-r~~~i~v~P~GID~~~f~~~~~~~~~~~~~~ 354 (937)
.+- .....+..+|.|...+...+..-+. .+.+ ...++.++|+|||++.|.+....++.. ..+
T Consensus 173 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~-~~~ 236 (439)
T TIGR02472 173 RRIEAEEETLAHASLVITSTHQEIEEQYA---------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEETS-EID 236 (439)
T ss_pred HHHHHHHHHHHhCCEEEECCHHHHHHHHH---------------hccCCCccceEEECCCcChhhcCCCCccccch-hHH
Confidence 010 0112334567666555432221110 0111 245788999999999997643221111 122
Q ss_pred HHHHHh---cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHH----HHHHHHHHHHH
Q 002314 355 ELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ----RLTSQVHEIVG 427 (937)
Q Consensus 355 ~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~----~l~~~l~~lv~ 427 (937)
..++++ .++++|++|||+++.||++.+|+||..+.+..+.. +++| ++|.+ .+.++++ ++.+++.+++.
T Consensus 237 ~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g--~~~~~l~~~~~~~~~~~~~~~~ 311 (439)
T TIGR02472 237 NLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCR--DDIRKMESQQREVLQKVLLLID 311 (439)
T ss_pred HHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCc--cccccccHHHHHHHHHHHHHHH
Confidence 222222 36789999999999999999999998753221111 2322 23321 1111121 22334444554
Q ss_pred HhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-
Q 002314 428 RINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (937)
Q Consensus 428 ~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l- 502 (937)
+++ ..+ .|+ |.|.++.+++.++|+.| |+||+||.+||||++++|||||+ .|+|+|..+|..+.+
T Consensus 312 ~~~----l~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~ 380 (439)
T TIGR02472 312 RYD----LYG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIA 380 (439)
T ss_pred HcC----CCc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhc
Confidence 432 222 355 57889999999999988 99999999999999999999994 799999999988887
Q ss_pred -CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHH
Q 002314 503 -GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (937)
Q Consensus 503 -g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l 559 (937)
|.+|++|+|.|++++|++|.++++++ +++.++.+++++++ +.|+|..-++++++-|
T Consensus 381 ~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 381 NCRNGLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred CCCcEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 46899999999999999999999865 56777788888876 6789999888887654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.2e-24 Score=250.16 Aligned_cols=314 Identities=22% Similarity=0.267 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCC--CCeEEEEEccCCC----chhhhcc--Cccc-----
Q 002314 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFP----SSEIHRT--LPSR----- 278 (937)
Q Consensus 212 ~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~--~~~I~~flH~PfP----s~e~fr~--lp~r----- 278 (937)
..+..++++.++.+.+.-...|+||+||||..++|.++++... ++|++++.|...+ +.+.+.. +|+.
T Consensus 109 ~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 109 ERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 3444455555555544334679999999999999999988754 3899999998642 1122211 1110
Q ss_pred --------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeeEEEEEecccChhhhhhhhcCC-
Q 002314 279 --------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN- 347 (937)
Q Consensus 279 --------~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~--~~gr~~~i~v~P~GID~~~f~~~~~~~- 347 (937)
.-+..++..||.|...++.|++..... ..+ .+++ +..+..++.++|||||.+.|.+.....
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~-----~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~ 260 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFG-----YGLDGVLKARSGKLRGILNGIDTEVWNPATDPYL 260 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCC-----ccchhHHHhcCCCeEEEeCCCCccccCCCCCccc
Confidence 012335667777777777666544321 000 0010 011346788999999999987532100
Q ss_pred ----------chHHHHHHHHHHhc-----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCCh
Q 002314 348 ----------PVQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV 412 (937)
Q Consensus 348 ----------~~~~~~~~lr~~~~-----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~ 412 (937)
.-......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++|.+ +
T Consensus 261 ~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g---~- 330 (473)
T TIGR02095 261 KANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG---D- 330 (473)
T ss_pred ccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC---C-
Confidence 00112345666663 5789999999999999999999999987542 457777632 1
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEE
Q 002314 413 PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 492 (937)
Q Consensus 413 ~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVl 492 (937)
+ .+.+++++++.+.+. .+.+ .+..+.+++..+|+.||++|+||.+||||++.+|||+|+ .|+|+
T Consensus 331 ~---~~~~~l~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~ 394 (473)
T TIGR02095 331 P---ELEEALRELAERYPG--------NVRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIV 394 (473)
T ss_pred H---HHHHHHHHHHHHCCC--------cEEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEE
Confidence 2 345566666654321 2454 345688889999999999999999999999999999994 79999
Q ss_pred eCCCCccccc--C------CceEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 493 SEFAGAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 493 Se~aG~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m---~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
|..+|..+.+ + .+|++|+|.|+++++++|.++|.+ .++.++++.++.. .+.++|..-++++++-.++
T Consensus 395 s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 395 RRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred ccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 9999999888 4 679999999999999999999873 3344444444433 3679999999988776543
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-24 Score=249.19 Aligned_cols=323 Identities=15% Similarity=0.190 Sum_probs=220.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhC------CCCeEEEEEccCC-----CchhhhccC
Q 002314 207 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPF-----PSSEIHRTL 275 (937)
Q Consensus 207 ~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~------~~~~I~~flH~Pf-----Ps~e~fr~l 275 (937)
|.+....|.-++++.++.+.+.--.+|+||+||||..++|.++++.. .++|++++.|... |...+-..+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44456667777777777665432256999999999999999998653 4789999999852 211110112
Q ss_pred ccc------------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhh
Q 002314 276 PSR------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (937)
Q Consensus 276 p~r------------~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~ 343 (937)
|+. .-+-.++..||.|..-++.|++.-......-.|++ .. +..+..++.+||||||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~---~~--l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD---KV--LEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH---HH--HHhcCCCeeEEeCCccccccCCc
Confidence 211 12334667888888888877765322000000110 00 11135688999999999999764
Q ss_pred hcCC--------ch---HHHHHHHHHHhc-----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcC
Q 002314 344 LEIN--------PV---QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (937)
Q Consensus 344 ~~~~--------~~---~~~~~~lr~~~~-----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p 407 (937)
.... .. .+....++++++ ++++|++|||+.+.||++.+++|+.++++. + +.|+++|.+
T Consensus 272 ~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvivG~G 345 (489)
T PRK14098 272 TDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVICGSG 345 (489)
T ss_pred ccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEEEeCC
Confidence 2110 00 011234555552 467999999999999999999999998752 2 558878642
Q ss_pred CCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCC
Q 002314 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (937)
Q Consensus 408 ~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~ 487 (937)
+. .+++++++++.+... .|.+ .+.++.+++..+|+.||+||+||.+||||++.+|||+|+
T Consensus 346 -----~~--~~~~~l~~l~~~~~~--------~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G---- 405 (489)
T PRK14098 346 -----DK--EYEKRFQDFAEEHPE--------QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG---- 405 (489)
T ss_pred -----CH--HHHHHHHHHHHHCCC--------CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC----
Confidence 21 244566667655321 3554 577899999999999999999999999999999999993
Q ss_pred ceEEEeCCCCccccc------CCceEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHH
Q 002314 488 GVLILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 488 g~lVlSe~aG~~~~l------g~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 559 (937)
.|+|++..+|..+.+ +.+|++|+|.|+++++++|.+++.+ .++.+.++.++. ..+.++|..-++++++-.
T Consensus 406 ~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 406 TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLY 483 (489)
T ss_pred CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHH
Confidence 689999999988766 3579999999999999999998742 223333333222 236789999999887766
Q ss_pred HHh
Q 002314 560 NDT 562 (937)
Q Consensus 560 ~~~ 562 (937)
+++
T Consensus 484 ~~~ 486 (489)
T PRK14098 484 REL 486 (489)
T ss_pred HHH
Confidence 554
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-23 Score=239.78 Aligned_cols=276 Identities=17% Similarity=0.129 Sum_probs=202.5
Q ss_pred CCCEEEEeCcccchHHHHHHhh-CCCCeEEEEEccCCCch-hhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS-EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~-~~~~~I~~flH~PfPs~-e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
..|+||+|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-..+-.+|.|...+....+.+..
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 4699999988776677777663 22446677888642111 1110 01122333345789988877654443321
Q ss_pred HhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHh
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~l 388 (937)
+| ....++.++|+|||.+.|.+.... ...+...|++|||+.+.||++.+|+|+..+
T Consensus 192 -~g-----------~~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 192 -MG-----------CPPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred -cC-----------CCHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 12 124578899999999988642110 113456799999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002314 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (937)
Q Consensus 389 l~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (937)
.+++|++ .|+++|. ++. ++++++++.+.+. ...+.+.|.++.+++..+|+.||+||+||.
T Consensus 248 ~~~~~~~----~l~ivG~-----G~~----~~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~pS~ 307 (406)
T PRK15427 248 KEQGVAF----RYRILGI-----GPW----ERRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLLPSV 307 (406)
T ss_pred HhhCCCE----EEEEEEC-----chh----HHHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEECCc
Confidence 8887765 4777763 332 3445555555331 123345899999999999999999999998
Q ss_pred C------cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 469 R------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 469 ~------EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
. |||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++++++++++++.++++
T Consensus 308 ~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 308 TGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred cCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4 99999999999994 799999999988887 67899999999999999999999966677888888888
Q ss_pred hhh-hcCCHHHHHHHHHHHHH
Q 002314 541 THV-TTHTAQEWAETFVSELN 560 (937)
Q Consensus 541 ~~V-~~~~~~~W~~~fl~~l~ 560 (937)
+++ ..|++...++++.+-++
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 384 EKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHh
Confidence 887 66999999998877654
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-23 Score=241.35 Aligned_cols=318 Identities=20% Similarity=0.216 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CCCCEEEEeCcccchHHHHHHhh-CCCCeEEEEEccC-----CCchhhhcc--Ccc-
Q 002314 209 SQFAAYIKANQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHRT--LPS- 277 (937)
Q Consensus 209 ~~w~~Y~~vN~~fA~~i~~~~--~~~DvVwvHDyhl~llp~~Lr~~-~~~~~I~~flH~P-----fPs~e~fr~--lp~- 277 (937)
+...-|.-++++-.+.+.... ..+||||+||||..++|.+++.. ..+++++++.|.. ||. ..+.. +|.
T Consensus 109 d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~ 187 (485)
T PRK14099 109 DNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPS 187 (485)
T ss_pred cHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChH
Confidence 334445444444333222221 25699999999999999998753 3568899999974 221 11110 111
Q ss_pred -----c-------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhc
Q 002314 278 -----R-------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE 345 (937)
Q Consensus 278 -----r-------~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~ 345 (937)
+ .-+..++..||.|...++.|++.....- .-.|++ + .+.-+..++.+||||||++.|.+...
T Consensus 188 ~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~-~g~gl~----~-~l~~~~~ki~vI~NGID~~~f~p~~~ 261 (485)
T PRK14099 188 AFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPE-AGMGLD----G-LLRQRADRLSGILNGIDTAVWNPATD 261 (485)
T ss_pred HcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhccc-CCcChH----H-HHHhhCCCeEEEecCCchhhcccccc
Confidence 0 1134456677877777776655433200 000000 0 01113467899999999999976432
Q ss_pred CC-----ch------HHHHHHHHHHhc-----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCC
Q 002314 346 IN-----PV------QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (937)
Q Consensus 346 ~~-----~~------~~~~~~lr~~~~-----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r 409 (937)
.. .. ......++++++ +.++|++||||.+.||++.+++|+..+++. + +.|+++|.+
T Consensus 262 ~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~G-- 333 (485)
T PRK14099 262 ELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGSG-- 333 (485)
T ss_pred chhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEecC--
Confidence 10 00 011245666663 356788999999999999999999998753 2 457777642
Q ss_pred CChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH-HHccEEEECCCCcCCChhHHHHHHhcCCCCc
Q 002314 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY-AVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (937)
Q Consensus 410 ~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g 488 (937)
+ + .+++++++++.+... .+.++.|. .+++..+| +.||+||+||.+||||++.+|||+|+ +
T Consensus 334 -~-~---~~~~~l~~l~~~~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ 394 (485)
T PRK14099 334 -D-A---ELEARFRAAAQAYPG--------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----A 394 (485)
T ss_pred -C-H---HHHHHHHHHHHHCCC--------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----C
Confidence 1 1 244566666654321 24344565 57888877 56999999999999999999999993 5
Q ss_pred eEEEeCCCCccccc--C---------CceEEECCCCHHHHHHHHHHH---HcCCHHHHHHHHHhhhhhhhcCCHHHHHHH
Q 002314 489 VLILSEFAGAAQSL--G---------AGAILVNPWNITEVANAIARA---LNMSPEEREKRHWHNFTHVTTHTAQEWAET 554 (937)
Q Consensus 489 ~lVlSe~aG~~~~l--g---------~~gllVnP~D~~~lA~aI~~a---L~m~~~er~~r~~~~~~~V~~~~~~~W~~~ 554 (937)
|+|+|..+|..+.+ + .+|++|+|.|+++++++|.++ +++ ++.++++.++.+ .+.++|..-+++
T Consensus 395 ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~--~~~fSw~~~a~~ 471 (485)
T PRK14099 395 VPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM--TTDVSWRNPAQH 471 (485)
T ss_pred CcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh--hhcCChHHHHHH
Confidence 88889998988876 2 369999999999999999984 433 344554444443 477999999999
Q ss_pred HHHHHHHhH
Q 002314 555 FVSELNDTV 563 (937)
Q Consensus 555 fl~~l~~~~ 563 (937)
+++-.+++.
T Consensus 472 y~~lY~~l~ 480 (485)
T PRK14099 472 YAALYRSLV 480 (485)
T ss_pred HHHHHHHHH
Confidence 887766553
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.9e-23 Score=234.41 Aligned_cols=289 Identities=19% Similarity=0.199 Sum_probs=212.6
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhc---cCcc--chHHH--HhhhcCCEEEEeCHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLL--RAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr---~lp~--r~eil--~~ll~aDlIgF~t~~~~~~Fl 303 (937)
..|+||+|++...+++.++++. .++|+++++|..++-...+. ..+. ...++ ..+..+|.|.+.+...++.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999997666666666553 46889999997542111110 0111 11222 234578999999987777665
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~ 380 (937)
.. .+ ....++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||+..
T Consensus 180 ~~----~~-----------~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 RH----YD-----------ADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred HH----cC-----------CChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 31 11 1235788999999998886421 11234444 36789999999999999999
Q ss_pred HHHHHHHhHHhCcCccCcEEEEEEEcCCCCCh-hHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~-~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
+++|++++++++|+. ++.|+++|.+.. ++ +.. +++++++.+.+.. ..|. +.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999988873 477888886442 23 222 3445555544321 1355 5789999999999999
Q ss_pred ccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 002314 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (937)
Q Consensus 460 ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 537 (937)
||++++||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++ +++.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~-~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDP-RTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Confidence 999999999999999999999994 789999988888777 56799999999999999999999854 55666777
Q ss_pred hhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 538 HNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 538 ~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
++++.++.++|...++++++-+.++
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7788888899999999988776654
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-23 Score=238.53 Aligned_cols=284 Identities=17% Similarity=0.195 Sum_probs=197.5
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCc--hhh-hc-cCccc--------hH---HHHhhhcCCEEEEeC
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------SD---LLRAVLAADLVGFHT 295 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs--~e~-fr-~lp~r--------~e---il~~ll~aDlIgF~t 295 (937)
.+|+|+.|. .+....++++..|++++..+.|..+-. .+. |. ..+.+ .. ....+-.+|.|...+
T Consensus 87 ~pdvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 459999994 555667788889999988777643311 110 11 11111 11 234566788887766
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEec-
Q 002314 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDR- 371 (937)
Q Consensus 296 ~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdR- 371 (937)
......|.. .. ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~----------------~~--~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA----------------EL--RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH----------------hh--ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 543333221 01 1578899999999988753210 11111111 36788999998
Q ss_pred ccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChh--H-HHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 002314 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP--E-YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (937)
Q Consensus 372 ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~--~-y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v 448 (937)
+.+.||++.+++|+..+.+++|+++ |+++|......+. + -..+++ ++..+++.+.+ ...|+ |.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~---~~~V~-f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQ---HMLDELGGRLD---LSRVH-FLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHH---HHHHHhhcccC---cceEE-EeCCC
Confidence 9999999999999999998888765 7778742211000 0 001111 22222222111 12466 47999
Q ss_pred CHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHc
Q 002314 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (937)
Q Consensus 449 ~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (937)
+.+++.++|+.||++|+||..||+|++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999994 799999998888887 568999999999999999999998
Q ss_pred CCHHHHHHHHHhhhhhhhc-CCHHHHHHHHH
Q 002314 527 MSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (937)
Q Consensus 527 m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl 556 (937)
++ +++.++.+++++++.+ +++...+++++
T Consensus 366 ~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 75 5677788888888866 88888777765
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-22 Score=241.88 Aligned_cols=331 Identities=14% Similarity=0.156 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHHHHhC-CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCC----chh-hhccCc------cc
Q 002314 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SSE-IHRTLP------SR 278 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~-~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfP----s~e-~fr~lp------~r 278 (937)
|.....+....++.+.... ..+|+||.|.+.--+++..++++. ++|..++.|..=. ... .+..+. .+
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 5555566666666655443 357999999988878888887765 7888888886411 111 011010 01
Q ss_pred -hHHHHhhhcCCEEEEeCHHHHHHHHHHHH-----HHhCccc---CCCceeeCCeeeEEEEEecccChhhhhhhhcCCch
Q 002314 279 -SDLLRAVLAADLVGFHTYDYARHFVSACT-----RILGFEG---TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPV 349 (937)
Q Consensus 279 -~eil~~ll~aDlIgF~t~~~~~~Fl~~~~-----r~lg~~~---~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~ 349 (937)
..=+..|-.||.|.-.|+.-...-...+. ..+.... .-+++. ....++.++|+|+|++.|.+......-
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid--~~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGID--VFDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCcc--CCcCCeEEECCCcChhhcCCCCchhhh
Confidence 00125677799998877632111001110 0001000 001111 123488999999999999764321100
Q ss_pred -HHHH----------HHHHHHh-----cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCC---
Q 002314 350 -QVHI----------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT--- 410 (937)
Q Consensus 350 -~~~~----------~~lr~~~-----~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~--- 410 (937)
.... ...++.+ .++++|++|||+++.||+..+++||.++.+..+ .+.||++|++...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCcccccc
Confidence 0000 0112333 367899999999999999999999987644333 4668888864321
Q ss_pred ChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHH----HccEEEECCCCcCCChhHHHHHHhcCC
Q 002314 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDL 485 (937)
Q Consensus 411 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~-v~~~el~aly~----~ADv~vv~Sl~EG~nLv~~EamAc~~~ 485 (937)
...+..+..+++.+++.+.+ ..+ .|.| .|. .+..++..+|+ .+||||+||.+||||||++|||||+
T Consensus 597 ~d~ee~~~i~~L~~la~~~g----L~g--~V~f-lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG-- 667 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQ----LHG--QIRW-IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG-- 667 (784)
T ss_pred cchhHHHHHHHHHHHHHHhC----CCC--eEEE-ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC--
Confidence 11122233455666665543 222 4665 454 35566666665 2479999999999999999999994
Q ss_pred CCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHH
Q 002314 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (937)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l 559 (937)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++ ..++.+.++..+++++| +.|+|...++++++..
T Consensus 668 --lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 668 --LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 778999999999999999999874 24456666777778776 7799999999987654
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-22 Score=237.80 Aligned_cols=313 Identities=22% Similarity=0.249 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhC-----CCCeEEEEEccCCCch----hhhcc--Ccc--
Q 002314 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPSS----EIHRT--LPS-- 277 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~-----~~~~I~~flH~PfPs~----e~fr~--lp~-- 277 (937)
...|...++...+.+.+.-..+|+||+||+|..++|.+++... .+.|++|+.|.+.+.. ..+.. +++
T Consensus 109 ~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 109 AERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 4445555666656555544567999999999999999998763 5889999999874321 11110 111
Q ss_pred ------------chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeeEEEEEecccChhhhhhh
Q 002314 278 ------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRA 343 (937)
Q Consensus 278 ------------r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~--~~gr~~~i~v~P~GID~~~f~~~ 343 (937)
..-+..++..||.|...++.+++...+. .. ..+++ ...+..++.++|||||.+.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-------~~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~ 260 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-------EF-GEGLDGLLRARAGKLSGILNGIDYDVWNPA 260 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-------CC-CcchHHHHHhccCCeEEEeCCCcCcccCcc
Confidence 0123345667788777777666654321 00 00110 11234689999999999988764
Q ss_pred hcCC-----------chHHHHHHHHHHh-----cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcC
Q 002314 344 LEIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (937)
Q Consensus 344 ~~~~-----------~~~~~~~~lr~~~-----~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p 407 (937)
.... .-......+++++ .++++|+++||+.+.||++.+++|++++.++. +.|+++|.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g 334 (476)
T cd03791 261 TDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG 334 (476)
T ss_pred ccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC
Confidence 3211 0112234466665 36789999999999999999999999987643 457777642
Q ss_pred CCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCC
Q 002314 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (937)
Q Consensus 408 ~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~ 487 (937)
+ + .+.+++++++.+.. ..++++.+ .+.+++..+|+.||++|+||.+||||++.+|||+|+
T Consensus 335 ---~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G---- 394 (476)
T cd03791 335 ---D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG---- 394 (476)
T ss_pred ---C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----
Confidence 1 2 23455566655431 13565544 457778899999999999999999999999999994
Q ss_pred ceEEEeCCCCccccc--CC------ceEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHhhhhhhhcCCHHHHHHHHHH
Q 002314 488 GVLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (937)
Q Consensus 488 g~lVlSe~aG~~~~l--g~------~gllVnP~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~V~~~~~~~W~~~fl~ 557 (937)
.|+|+|..+|..+.+ +. +|++|+|.|+++++++|.+++++. ++++.++.++..+ ..++|..-++++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 799999999999888 44 899999999999999999998643 3344444444333 45888888888876
Q ss_pred HH
Q 002314 558 EL 559 (937)
Q Consensus 558 ~l 559 (937)
.+
T Consensus 473 ~y 474 (476)
T cd03791 473 LY 474 (476)
T ss_pred HH
Confidence 54
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-22 Score=240.71 Aligned_cols=331 Identities=15% Similarity=0.124 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHHHhC-CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccC-----------CCchh-hhccC-c
Q 002314 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP-----------FPSSE-IHRTL-P 276 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~-~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~P-----------fPs~e-~fr~l-p 276 (937)
|..-..++...++.+.... ..+|+||-|++.--+++..|+++. ++|.+++.|.- |...+ .++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 6666666666666664433 357999999877778888888765 89999999952 11000 11100 0
Q ss_pred cchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCc-ccC-C------CceeeCCeeeEEEEEecccChhhhhhhhcCC-
Q 002314 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGF-EGT-P------EGVEDQGRLTRVAAFPIGIDSERFIRALEIN- 347 (937)
Q Consensus 277 ~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~-~~~-~------~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~- 347 (937)
...| ...|..||.|.-.|+.-....-..+..+-.. ..+ + .++.+. ..++.++|+|+|...|.+.....
T Consensus 466 ~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 466 FTAD-LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred hHHH-HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 0011 2245566666544432111000000000000 000 0 111111 23788999999999987532110
Q ss_pred -------chHHHH---HHHHHHh-----cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCC-CCC
Q 002314 348 -------PVQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT-RTD 411 (937)
Q Consensus 348 -------~~~~~~---~~lr~~~-----~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~-r~~ 411 (937)
.+.+.. ...++.+ .++++|++|||+++.||+..+++||.++.+..++ +.|+++|++. ...
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCccccc
Confidence 000000 0011222 2567999999999999999999999988665554 5588887541 111
Q ss_pred --hhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC---CCCCHHHHHHHHH-HccEEEECCCCcCCChhHHHHHHhcCC
Q 002314 412 --VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDL 485 (937)
Q Consensus 412 --~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~---~~v~~~el~aly~-~ADv~vv~Sl~EG~nLv~~EamAc~~~ 485 (937)
..+..+..+++.+++.+.+ ..+ .|.|+. +..+.++++.+|+ ++|+||+||.+||||+|++|||||+
T Consensus 619 s~d~ee~~el~~L~~La~~lg----L~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~G-- 690 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYN----LKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCG-- 690 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcC----CCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcC--
Confidence 1111122244556665543 222 355532 2445678888777 5799999999999999999999994
Q ss_pred CCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHH
Q 002314 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (937)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l 559 (937)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++|. ..++.+.++.+++++.+ +.|+|...++++++-.
T Consensus 691 --lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 691 --LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 799999999999888 778999999999999999988753 34566777777888887 7799999999887744
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-22 Score=224.29 Aligned_cols=287 Identities=22% Similarity=0.204 Sum_probs=204.8
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhc-----cCccchH-HHHhhhcCCEEEEeCHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----TLPSRSD-LLRAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr-----~lp~r~e-il~~ll~aDlIgF~t~~~~~~Fl 303 (937)
...|+||+|++...+.+.++++ ..+.|+.+++|..+|...+.. ....... ....+..+|.|.+.+....+.+.
T Consensus 82 ~~~divh~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~ 160 (388)
T TIGR02149 82 VDADVVHSHTWYTFLAGHLAKK-LYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDIL 160 (388)
T ss_pred CCCCeEeecchhhhhHHHHHHH-hcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHH
Confidence 3579999999887766665544 458899999998655321100 0000111 12334568888888776655554
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~ 380 (937)
.. .-+ -...++.++|+|+|++.|.+.. ...+++++ .++++|+++||+.+.||+..
T Consensus 161 ~~---~~~-----------~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~ 218 (388)
T TIGR02149 161 KY---YPD-----------LDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPH 218 (388)
T ss_pred HH---cCC-----------CCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHH
Confidence 31 001 1235788999999998876421 12234444 35679999999999999999
Q ss_pred HHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 002314 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (937)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (937)
+++|++++. ++ +.|+++|.+. +.+ ++.+++++++..++... ..|+++.+.++.+++..+|+.|
T Consensus 219 li~a~~~l~---~~----~~l~i~g~g~--~~~---~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 219 LLDAVHYIP---KD----VQVVLCAGAP--DTP---EVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred HHHHHHHHh---hc----CcEEEEeCCC--CcH---HHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhC
Confidence 999999873 33 3366555322 112 34455555555443211 2477778899999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCH------HHHHHHHHHHHcCCHHHH
Q 002314 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEER 532 (937)
Q Consensus 461 Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~------~~lA~aI~~aL~m~~~er 532 (937)
|++|+||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++|+|.|. ++++++|.++++. ++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~ 356 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELA 356 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHH
Confidence 99999999999999999999994 799999998888877 567999999998 9999999999985 4566
Q ss_pred HHHHHhhhhhh-hcCCHHHHHHHHHHHHHH
Q 002314 533 EKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (937)
Q Consensus 533 ~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 561 (937)
.++..++++.+ +.++|..+++++++.+++
T Consensus 357 ~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 357 KKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 77777777776 679999999999877764
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-22 Score=231.90 Aligned_cols=277 Identities=18% Similarity=0.204 Sum_probs=197.9
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc-h---HHHHh-hhcCCEEEEeCHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRA-VLAADLVGFHTYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r-~---eil~~-ll~aDlIgF~t~~~~~~Fl~~ 305 (937)
..|+||+|+...+.++.++-.+..++|+++.+|.-+|.........+. + .+.+. ...+|.|...+....+.|..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 469999998766655554433344788988888765432100011110 0 11121 22578888877766555442
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh----cCCcEEEEEecccccCCHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~iIL~VdRld~~KGi~~~ 381 (937)
.+. ....++.++|+|||.+.|.+.... ..+++++ .++++|+++||+.+.||+..+
T Consensus 223 ----~~~----------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ----AGV----------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ----cCC----------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 010 113578899999999988654221 1233333 367899999999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|++++ |++ .|+++| +++. ++++++++.. .+|+| .|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~~----~l~ivG-----~G~~----~~~l~~~~~~----------~~V~f-~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PGA----RLAFVG-----DGPY----REELEKMFAG----------TPTVF-TGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CCc----EEEEEe-----CChH----HHHHHHHhcc----------CCeEE-eccCCHHHHHHHHHHCC
Confidence 9988764 544 477776 3333 2345555432 14664 79999999999999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-----CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (937)
+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++++ +.++++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADP-ELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHH
Confidence 9999999999999999999994 799999998888776 35799999999999999999999854 5677778
Q ss_pred HhhhhhhhcCCHHHHHHHHHHH-HHHh
Q 002314 537 WHNFTHVTTHTAQEWAETFVSE-LNDT 562 (937)
Q Consensus 537 ~~~~~~V~~~~~~~W~~~fl~~-l~~~ 562 (937)
+++++++++|+|...+++++.. ...+
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~~Y~~~ 435 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNEQYSAA 435 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 8888899999999999999874 4444
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-21 Score=222.38 Aligned_cols=297 Identities=20% Similarity=0.221 Sum_probs=208.9
Q ss_pred HHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhh--hcc---Ccc-ch-HHHHhhhcCCEEEE
Q 002314 221 FADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI--HRT---LPS-RS-DLLRAVLAADLVGF 293 (937)
Q Consensus 221 fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~--fr~---lp~-r~-eil~~ll~aDlIgF 293 (937)
+...+.+....+|+|++|++....++..+++. .++|+.++.|........ ... .+. +. .....+..+|.|.+
T Consensus 91 ~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~ 169 (398)
T cd03800 91 LLRFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIA 169 (398)
T ss_pred HHHHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEE
Confidence 33344443336799999998777777666554 478899999975432110 000 000 11 11234457899998
Q ss_pred eCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEeccc
Q 002314 294 HTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD 373 (937)
Q Consensus 294 ~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld 373 (937)
.+......+.. .. .....++.++|+|+|.+.|.+.... ......+. ...++.+|+++||++
T Consensus 170 ~s~~~~~~~~~----~~-----------~~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~ 230 (398)
T cd03800 170 STPQEAEELYS----LY-----------GAYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLD 230 (398)
T ss_pred cCHHHHHHHHH----Hc-----------cccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccc
Confidence 88866655543 11 1123357899999999887653211 01111111 114678999999999
Q ss_pred ccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHH
Q 002314 374 MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPAL 453 (937)
Q Consensus 374 ~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el 453 (937)
+.||+..+++|+..+.+++|++ .|+++|.......+ ....++++++.+.+. . ..|. +.|.++.+++
T Consensus 231 ~~k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~~~~~~---~~~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~ 296 (398)
T cd03800 231 PRKGIDTLIRAYAELPELRERA----NLVIVGGPRDDILA---MDEEELRELARELGV----I--DRVD-FPGRVSREDL 296 (398)
T ss_pred cccCHHHHHHHHHHHHHhCCCe----EEEEEECCCCcchh---hhhHHHHHHHHhcCC----C--ceEE-EeccCCHHHH
Confidence 9999999999999998887765 47778754322211 223345555554332 1 1355 5799999999
Q ss_pred HHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHH
Q 002314 454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (937)
Q Consensus 454 ~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 531 (937)
..+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ ++
T Consensus 297 ~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~ 371 (398)
T cd03800 297 PALYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP-AL 371 (398)
T ss_pred HHHHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCH-HH
Confidence 999999999999999999999999999994 789999999988888 45799999999999999999999864 56
Q ss_pred HHHHHHhhhhhh-hcCCHHHHHHHHH
Q 002314 532 REKRHWHNFTHV-TTHTAQEWAETFV 556 (937)
Q Consensus 532 r~~r~~~~~~~V-~~~~~~~W~~~fl 556 (937)
+.++..++++++ +.++++..+++++
T Consensus 372 ~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 372 RRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 777777888887 8899999998875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.7e-22 Score=233.67 Aligned_cols=283 Identities=19% Similarity=0.156 Sum_probs=198.8
Q ss_pred HHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCch---hhhcc---CccchH--------HH-HhhhcC
Q 002314 224 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRSD--------LL-RAVLAA 288 (937)
Q Consensus 224 ~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~---e~fr~---lp~r~e--------il-~~ll~a 288 (937)
.+...+.+.|+||+|......++..+..+..+.|+.++.|--++.. +++.. .+..+. +. ..+..|
T Consensus 166 ~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 245 (475)
T cd03813 166 AIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAA 245 (475)
T ss_pred HhccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 4555566789999998665544554444455899999999765521 22211 000011 11 112356
Q ss_pred CEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEE
Q 002314 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLG 368 (937)
Q Consensus 289 DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~ 368 (937)
|.|...+........ .++....++.++|+|||.+.|.+.... ....++++|++
T Consensus 246 d~Ii~~s~~~~~~~~----------------~~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~ 298 (475)
T cd03813 246 DRITTLYEGNRERQI----------------EDGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGL 298 (475)
T ss_pred CEEEecCHHHHHHHH----------------HcCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEE
Confidence 666655443222111 112234578899999999988653210 11246789999
Q ss_pred EecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 002314 369 VDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (937)
Q Consensus 369 VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v 448 (937)
+||+.+.||+..+|+|+..+.++.|+++ |+++|... ..+ .+.+++++++++.+.. ..|+| .|
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~--~~~---~~~~e~~~li~~l~l~------~~V~f-~G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD--EDP---EYAEECRELVESLGLE------DNVKF-TG-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC--cCh---HHHHHHHHHHHHhCCC------CeEEE-cC--
Confidence 9999999999999999999988888754 77776321 112 3456777777765531 14665 55
Q ss_pred CHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCC--------ceEEECCCCHHHHHHH
Q 002314 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANA 520 (937)
Q Consensus 449 ~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~--------~gllVnP~D~~~lA~a 520 (937)
.+++..+|+.||++|+||..|||+++++|||||+ .|+|+|+.+|+.+.+.. +|++|+|.|++++|++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 5789999999999999999999999999999994 78999999888877733 7999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhhhhc-CCHHHHHHHHHH
Q 002314 521 IARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVS 557 (937)
Q Consensus 521 I~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~ 557 (937)
|.++++++ +.+.++.+++++++++ +++...+++|.+
T Consensus 436 i~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 436 ILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999864 5677777888887755 577887777765
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-21 Score=224.27 Aligned_cols=278 Identities=14% Similarity=0.168 Sum_probs=196.2
Q ss_pred CCCEEEEeCcccchH-HHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHH-hhhcCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~ll-p~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~-~ll~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
..|+||+|+++..+. ...+..+..++|++++.|..|+..+.... +...+.+ .+-.+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999775433 23333334578999999987653322111 1112222 2346888888887655544321
Q ss_pred HhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHh
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~l 388 (937)
. .....++.++|+|+|.+.|.+.... ...++++|+++||+.+.||+..+++|+..+
T Consensus 163 -~-----------~~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 -A-----------SLDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred -h-----------CCChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 0 1124578899999999988653110 124678999999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002314 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (937)
Q Consensus 389 l~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (937)
.++.|+++ |+++|. ++.. +++++++.+.+ ..+ .|.+ .|.++.+++..+|+.||++|+||.
T Consensus 219 ~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~----l~~--~v~~-~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNVR----FIIGGD-----GPKR----ILLEEMREKYN----LQD--RVEL-LGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCEE----EEEEeC-----CchH----HHHHHHHHHhC----CCC--eEEE-eCCCCHHHHHHHHHhCCEEEeCCh
Confidence 88888754 777763 3333 33444554432 111 3664 689999999999999999999999
Q ss_pred CcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCc-eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh-hhcC
Q 002314 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (937)
Q Consensus 469 ~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~-gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-V~~~ 546 (937)
.||||++++|||||+ .|+|+|..+|..+.+..+ +++++| |.++++++|.+++.++.+. .....++++. .+.+
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~-~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISILRTG-KHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhChhhh-hhHHHHHHHHHHhhC
Confidence 999999999999994 799999999988877433 445544 9999999999999876433 3344555554 4779
Q ss_pred CHHHHHHHHHHHHHHhH
Q 002314 547 TAQEWAETFVSELNDTV 563 (937)
Q Consensus 547 ~~~~W~~~fl~~l~~~~ 563 (937)
++..-++++++.++...
T Consensus 353 s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 353 SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999988877654
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=211.47 Aligned_cols=194 Identities=22% Similarity=0.362 Sum_probs=146.2
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCceEE
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~i 672 (937)
||++||||||++.. ...++++++++|++|+++ +..|+|+|||+...+.+++..++.++|++||+++
T Consensus 1 li~~D~DgTL~~~~-------------~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDPN-------------AHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 68999999999852 245889999999999985 6999999999999999999888889999999999
Q ss_pred EecCC-eeeeccccccChhHH---HHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCC-
Q 002314 673 RCTTG-KWMTTMPEHLNMEWV---DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS- 747 (937)
Q Consensus 673 r~~~~-~w~~~~~~~~~~~w~---~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~- 747 (937)
+..++ .|.. +......|. +.+..++..+...+++..+|.+...+.+||+..... .....++...+ .....
T Consensus 67 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELG--QELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchh--hHHHHHHHHHH-Hhhccc
Confidence 86443 2432 111111121 233444555556778888899999999999875111 11223344444 33221
Q ss_pred CCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 748 NASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 748 ~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
...+.+. .+..++||+|++++||.|++.++++++ ++.+++++||| +.||++||+.++.
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~~~~~~~ 200 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEMFEVAGL 200 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCC
Confidence 2457777 689999999999999999999999987 56899999999 9999999999865
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-21 Score=217.32 Aligned_cols=232 Identities=16% Similarity=0.164 Sum_probs=172.7
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCc
Q 002314 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 364 (937)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 364 (937)
.+|.+...+....+.+.. .++ ....++.++|+|||.+.|.+.... .....++.+ .++.
T Consensus 136 ~~~~~i~vs~~~~~~~~~----~~~-----------~~~~~~~vi~ngvd~~~~~~~~~~-----~~~~~~~~~~~~~~~ 195 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRG----PVK-----------VPPAKIHQIYNGVDTERFHPSRGD-----RSPILPPDFFADESV 195 (374)
T ss_pred cCCeEEEeCHHHHHHHHH----hcC-----------CChhhEEEeccCccccccCCCccc-----hhhhhHhhcCCCCCe
Confidence 367777777765554433 111 123567889999999888643211 111112222 3577
Q ss_pred EEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEe
Q 002314 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (937)
Q Consensus 365 iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~ 444 (937)
+|+++||+++.||+..+++|+..+++++|+...++.|+++|. ++.. +++++++.+.+. ...+++
T Consensus 196 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~~-------~~~v~~ 259 (374)
T TIGR03088 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAGL-------AHLVWL 259 (374)
T ss_pred EEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcCC-------cceEEE
Confidence 999999999999999999999999999887655678888863 2322 334444444331 233445
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHH
Q 002314 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 522 (937)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~ 522 (937)
.|. .+++..+|+.||++|+||..||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.
T Consensus 260 ~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~ 333 (374)
T TIGR03088 260 PGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333 (374)
T ss_pred cCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHH
Confidence 664 5789999999999999999999999999999994 799999998888887 56799999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHHH
Q 002314 523 RALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (937)
Q Consensus 523 ~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 561 (937)
++++++ +++..+.+++++++ ..|++...++++++.+++
T Consensus 334 ~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 334 PYVSDP-AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999854 56677777888887 689999999988776654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.9e-21 Score=214.07 Aligned_cols=275 Identities=16% Similarity=0.113 Sum_probs=195.4
Q ss_pred HHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCch--hhhccCcc--chHHH-HhhhcCCEEEEeCHHHH
Q 002314 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRTLPS--RSDLL-RAVLAADLVGFHTYDYA 299 (937)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~--e~fr~lp~--r~eil-~~ll~aDlIgF~t~~~~ 299 (937)
+.+..+ .|+||+|+.+..+....+.+ ..++|+.+.+|...... ....+.++ ...+. ..+..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 444445 49999997664444433333 24788888888532111 11111011 11222 22346799888887555
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHH
Q 002314 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (937)
Q Consensus 300 ~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~ 379 (937)
+.+... + ....++.++|+|+|.+.|.+... ..++++++++||+.+.||++
T Consensus 155 ~~~~~~-----~-----------~~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLAL-----G-----------FPPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHHc-----C-----------CCHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 544431 1 12357889999999988764211 12467899999999999999
Q ss_pred HHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
.+++|+..+.+++|++ .|+++|. ++. .+++++++.+.+. . ..|+ +.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~~----~l~ivG~-----g~~----~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPEV----RLVIIGD-----GPL----LAALEALARALGL----G--GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeC-----chH----HHHHHHHHHHcCC----C--CeEE-ECCCCCHHHHHHHHHh
Confidence 9999999998888865 4777763 232 2345555554321 1 1355 5789999999999999
Q ss_pred ccEEEECCC------CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHH
Q 002314 460 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (937)
Q Consensus 460 ADv~vv~Sl------~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 531 (937)
||++|+||. .||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP-DL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH-HH
Confidence 999999997 599999999999994 799999999988877 56899999999999999999999854 46
Q ss_pred HHHHHHhhhhhh-hcCCHHHHHHHHH
Q 002314 532 REKRHWHNFTHV-TTHTAQEWAETFV 556 (937)
Q Consensus 532 r~~r~~~~~~~V-~~~~~~~W~~~fl 556 (937)
+.++..++++++ +.++|..+++++.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 667777888877 6799999988765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-20 Score=217.10 Aligned_cols=315 Identities=16% Similarity=0.155 Sum_probs=210.3
Q ss_pred hhhhhccccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCccc-chHHHHHHhhCCCCeE
Q 002314 180 GYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHL-MFLPKCLKEYNSDMKV 258 (937)
Q Consensus 180 gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl-~llp~~Lr~~~~~~~I 258 (937)
.+-..-+||-||-+.. .+...|-++..+.+ +. |.|||----. +-+| ++| ....||
T Consensus 108 ~~~~~~~~~~~t~~~~----------~~~~~~l~~~~~~~---------~~--p~v~vDt~~~~~~~p-l~~--~~~~~v 163 (463)
T PLN02949 108 KWIEEETYPRFTMIGQ----------SLGSVYLAWEALCK---------FT--PLYFFDTSGYAFTYP-LAR--LFGCKV 163 (463)
T ss_pred cccccccCCceehHHH----------HHHHHHHHHHHHHh---------cC--CCEEEeCCCcccHHH-HHH--hcCCcE
Confidence 3446667887775520 22334655554443 12 3578743221 1122 333 237899
Q ss_pred EEEEccCCCchhhhccCcc-------------------chHH-------H--HhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 259 GWFLHTPFPSSEIHRTLPS-------------------RSDL-------L--RAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 259 ~~flH~PfPs~e~fr~lp~-------------------r~ei-------l--~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
++.+|.|.-+.+....+-. .+.+ + ..+-.+|.|...+....+++.+ ..
T Consensus 164 ~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~ 239 (463)
T PLN02949 164 VCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LW 239 (463)
T ss_pred EEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----Hc
Confidence 9999988666544332200 0000 1 1124578777766654444432 11
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
+...++.++++|+|.+.|..... ....++.++++|||+.+.||+..+|+||.++++
T Consensus 240 ------------~~~~~i~vvyp~vd~~~~~~~~~------------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~ 295 (463)
T PLN02949 240 ------------RIPERIKRVYPPCDTSGLQALPL------------ERSEDPPYIISVAQFRPEKAHALQLEAFALALE 295 (463)
T ss_pred ------------CCCCCeEEEcCCCCHHHcccCCc------------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHH
Confidence 11236778999999877632110 011356789999999999999999999999887
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (937)
+.++-..++.|+++|.... ++..++.+++++++.+.+- .+ .|.| .+.++.+++..+|+.||++|.||..|
T Consensus 296 ~~~~~~~~~~LvIvG~~~~---~~~~~~~~eL~~la~~l~L----~~--~V~f-~g~v~~~el~~ll~~a~~~v~~s~~E 365 (463)
T PLN02949 296 KLDADVPRPKLQFVGSCRN---KEDEERLQKLKDRAKELGL----DG--DVEF-HKNVSYRDLVRLLGGAVAGLHSMIDE 365 (463)
T ss_pred hccccCCCcEEEEEeCCCC---cccHHHHHHHHHHHHHcCC----CC--cEEE-eCCCCHHHHHHHHHhCcEEEeCCccC
Confidence 5432222355888875421 1122334566666665432 11 3665 68999999999999999999999999
Q ss_pred CCChhHHHHHHhcCCCCceEEEeCCCCccc-cc-----CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 471 G~nLv~~EamAc~~~~~g~lVlSe~aG~~~-~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
|||++++|||||+ .|+|++..+|..+ .+ |.+|++++ |++++|++|.++++++++++.++.+++++.++
T Consensus 366 ~FGivvlEAMA~G----~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~ 439 (463)
T PLN02949 366 HFGISVVEYMAAG----AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRAN 439 (463)
T ss_pred CCChHHHHHHHcC----CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999999999994 6899999888653 33 34688874 99999999999999887888888888899999
Q ss_pred cCCHHHHHHHHHHHHHHh
Q 002314 545 THTAQEWAETFVSELNDT 562 (937)
Q Consensus 545 ~~~~~~W~~~fl~~l~~~ 562 (937)
+|+++.-++++++.+...
T Consensus 440 ~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 440 RFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred HcCHHHHHHHHHHHHHHH
Confidence 999999999888777654
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=209.68 Aligned_cols=280 Identities=20% Similarity=0.255 Sum_probs=196.9
Q ss_pred HHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHh-hhcCCEEEEeCHHHHHHHHH
Q 002314 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 226 ~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~-ll~aDlIgF~t~~~~~~Fl~ 304 (937)
++..+ +|+||+|.+|..++..+++...+..++....|...+... + +..+.+. ...++.+...+....+.|+.
T Consensus 75 ~~~~~-pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~-~-----~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 147 (360)
T cd04951 75 LRQFK-PDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR-L-----RMLAYRLTDFLSDLTTNVSKEALDYFIA 147 (360)
T ss_pred HHhcC-CCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH-H-----HHHHHHHHhhccCceEEEcHHHHHHHHh
Confidence 33444 589999999988888888777777888888886432111 0 0111111 11244554455544444433
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~ 381 (937)
.. .-...++.++|+|+|...|.+.. .....+++++ .++++++++||+.+.||+..+
T Consensus 148 ~~---------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~l 206 (360)
T cd04951 148 SK---------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNL 206 (360)
T ss_pred cc---------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHH
Confidence 10 01235788999999998875421 1233455554 367889999999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|+.++.+++|+++ |+++|. ++.. +++.+.+.+.+.. ..|.+ .|.. +++..+|+.||
T Consensus 207 i~a~~~l~~~~~~~~----l~i~G~-----g~~~----~~~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~ad 264 (360)
T cd04951 207 LKAFAKLLSDYLDIK----LLIAGD-----GPLR----ATLERLIKALGLS------NRVKL-LGLR--DDIAAYYNAAD 264 (360)
T ss_pred HHHHHHHHhhCCCeE----EEEEcC-----CCcH----HHHHHHHHhcCCC------CcEEE-eccc--ccHHHHHHhhc
Confidence 999999988887754 777753 2222 2333444443321 13554 5543 68899999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
++++||..||||++++|||||+ .|+|+|+.+|..+.+..+|++++|.|+++++++|.++++++++.+..+..+...
T Consensus 265 ~~v~~s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~ 340 (360)
T cd04951 265 LFVLSSAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRER 340 (360)
T ss_pred eEEecccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999994 799999998888888668999999999999999999998777666666555233
Q ss_pred hhhcCCHHHHHHHHHHHH
Q 002314 542 HVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 542 ~V~~~~~~~W~~~fl~~l 559 (937)
..+.+++..+++++++-+
T Consensus 341 ~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 341 IVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHhcCHHHHHHHHHHHh
Confidence 458899999999887654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-20 Score=213.31 Aligned_cols=283 Identities=17% Similarity=0.145 Sum_probs=190.3
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHH---------HhhhcCCEEEEeCHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL---------RAVLAADLVGFHTYDYAR 300 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil---------~~ll~aDlIgF~t~~~~~ 300 (937)
...|+|++|+..... + +++... ..++.++.|.| .........+.+.+. ..+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 467999999866432 2 233323 38899999954 221111001111111 113357887776664443
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHH
Q 002314 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 301 ~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~ 380 (937)
.+.. .++. .....+.++|+|||.+.|.+..... .........++.+|+++||+.+.||++.
T Consensus 168 ~~~~----~~~~----------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPS----------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhcc----------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3322 1110 0112335889999998886532110 0011112256788999999999999999
Q ss_pred HHHHHHHhHHhC---cCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHH-hhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002314 381 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 456 (937)
Q Consensus 381 ~l~Af~~ll~~~---P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~-IN~~~g~~~~~pV~~~~~~v~~~el~al 456 (937)
+|+|++++.++. |+ +.|+++|.+.. ...+..++.+++++++.+ .+. . ..|+| .|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~~l----~--~~V~f-~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDP-RVAENVEYLEELQRLAEELLLL----E--DQVIF-LPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCC-CCchhHHHHHHHHHHHHHhcCC----C--ceEEE-eCCCChHHHHHH
Confidence 999999998876 55 45877775321 112222345566666654 321 1 24664 789999999999
Q ss_pred HHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHH
Q 002314 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (937)
Q Consensus 457 y~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~ 534 (937)
|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++| |.+++|++|.++++++ +++.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~-~~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP-DLADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh-HHHHH
Confidence 999999999999999999999999994 799999988888877 457999987 9999999999999876 46677
Q ss_pred HHHhhhhhh-hcCCHHHHHHH
Q 002314 535 RHWHNFTHV-TTHTAQEWAET 554 (937)
Q Consensus 535 r~~~~~~~V-~~~~~~~W~~~ 554 (937)
+.+++++++ ..+++...+++
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 777888876 66888887765
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=218.71 Aligned_cols=273 Identities=18% Similarity=0.165 Sum_probs=184.1
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccC-------------ccch--HH-------------HH
Q 002314 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-------------LR 283 (937)
Q Consensus 232 ~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~l-------------p~r~--ei-------------l~ 283 (937)
+|+|..|--+... -.+.+..+++|+++.+|-|.-+++.+..+ ..+. .+ .-
T Consensus 108 pDv~i~~~g~~~~--~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFT--YPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccH--HHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 5865555322222 23444566889999999553344544221 1111 01 11
Q ss_pred hhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCC
Q 002314 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (937)
Q Consensus 284 ~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (937)
.+-.||.|...+.....+|.+ .. +...++.++++|+|.+.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~------------~~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LW------------KRNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----Hh------------CcCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 233678777776644444432 11 11236789999999988754211 012356
Q ss_pred cEEEEEecccccCCHHHHHHHHHHhHHhCcCcc-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 002314 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (937)
Q Consensus 364 ~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~-~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (937)
.+|+++||+.+.||+..+|+||..+.+..|+.. .++.|+++|....... .++.+++++++.+.+.. ..|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~---~~~~~~L~~~~~~l~l~------~~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDD---EKRVEDLKLLAKELGLE------DKVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCccc---HHHHHHHHHHHHHhCCC------CeEE
Confidence 799999999999999999999999998887521 2466888875321111 23456677777665421 1366
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccc-cc-----CCceEEECCCCHHH
Q 002314 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 516 (937)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~-~l-----g~~gllVnP~D~~~ 516 (937)
| .+.++.+++..+|+.||++|.||..||||++++|||||+ .|+|+|..+|..+ .+ |.+|++++ |+++
T Consensus 309 f-~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 F-VVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred E-ecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 4 789999999999999999999999999999999999994 6888998777654 33 45799974 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHH
Q 002314 517 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (937)
Q Consensus 517 lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 550 (937)
+|++|.++++++++++..+.++.++..++|++..
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 9999999999987666655444445456676654
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.9e-20 Score=206.24 Aligned_cols=277 Identities=16% Similarity=0.167 Sum_probs=194.1
Q ss_pred CCCEEEEeCcccchHHHHHHhhC---CCCeEEEEEccCCCchhhhccCcc-chHHHHhhhcCCEEEEeCHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPS-RSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~---~~~~I~~flH~PfPs~e~fr~lp~-r~eil~~ll~aDlIgF~t~~~~~~Fl~~~ 306 (937)
.+|+||+|++....++.++..+. .+.++.+++|..-.. ....-+. +.-+...+..+|.|.+.+......+...+
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 161 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYELF 161 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHhc
Confidence 46999999876555555544322 268888888853111 0111111 12233445578999999887666554311
Q ss_pred HHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHH
Q 002314 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 383 (937)
Q Consensus 307 ~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~ 383 (937)
+...++.++|+|+|...|.+... ...++++ .++++++++||+.+.||+..+++
T Consensus 162 ----------------~~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 162 ----------------DITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred ----------------CCcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 12346789999999887754211 1223333 36788999999999999999999
Q ss_pred HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002314 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (937)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (937)
|+..+.++ ++ +.|+++|.+ ++.. ++++++.+.+. . ..|.+ .|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~~----~~~~~~~~~~~----~--~~v~~-~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PERS----PAERLARELGL----Q--DDVLF-LGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCHH----HHHHHHHHcCC----C--ceEEE-ecCc--ccHHHHHHhcCEE
Confidence 99988655 33 346666532 2222 33344443321 1 13665 4544 5799999999999
Q ss_pred EECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 464 vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
|+||..||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.++++++ +++.++.+++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDD-ELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 99999999999999999994 799999999988877 56899999999999999999999854 566667777787
Q ss_pred h-hhcCCHHHHHHHHHHHHHH
Q 002314 542 H-VTTHTAQEWAETFVSELND 561 (937)
Q Consensus 542 ~-V~~~~~~~W~~~fl~~l~~ 561 (937)
+ ...|++...++++++-+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5789999999988876653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.7e-20 Score=214.13 Aligned_cols=289 Identities=11% Similarity=0.028 Sum_probs=189.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeE-EEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKV-GWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I-~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
..|+||.|++...+++.+..... .+|+ +...|. ++....-+.+- ++ ...+..++++.-.+. ++.+.....+.+
T Consensus 280 rpDIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~-~e--~~~~~~a~~i~~~sd-~v~~s~~v~~~l 353 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFK-PE--YEPLYQALAVVPGVD-FMSNNHCVTRHY 353 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHH-HH--HHHhhhhceeEecch-hhhccHHHHHHH
Confidence 45999999999877766665544 4555 455675 32211001000 00 012333445433332 332222211211
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCHHHHHHHHHHh
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi~~~l~Af~~l 388 (937)
.. .+.-...+|.+||||||++.|.+....+ ......++..+ .+..+|++|+|+.+.||...+|+|+.++
T Consensus 354 ~~--------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~l 423 (578)
T PRK15490 354 AD--------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARY 423 (578)
T ss_pred HH--------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHH
Confidence 10 0112457899999999999887642111 11112222223 2456888999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002314 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (937)
Q Consensus 389 l~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (937)
+++.|+++ |+++| +++. ++++++++.+.+. . ..|+| .|. .+++..+|+.||+||+||.
T Consensus 424 lk~~pdir----LvIVG-----dG~~----~eeLk~la~elgL----~--d~V~F-lG~--~~Dv~~~LaaADVfVlPS~ 481 (578)
T PRK15490 424 LQHHPATR----FVLVG-----DGDL----RAEAQKRAEQLGI----L--ERILF-VGA--SRDVGYWLQKMNVFILFSR 481 (578)
T ss_pred HhHCCCeE----EEEEe-----Cchh----HHHHHHHHHHcCC----C--CcEEE-CCC--hhhHHHHHHhCCEEEEccc
Confidence 99888754 77776 3332 3455555555432 1 13665 565 4689999999999999999
Q ss_pred CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHhhhhhh-
Q 002314 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHV- 543 (937)
Q Consensus 469 ~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~V- 543 (937)
+||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++++++..+..+. ...+..+.+++++++
T Consensus 482 ~EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~ 557 (578)
T PRK15490 482 YEGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQ 557 (578)
T ss_pred ccCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999994 799999999988877 78999999999999998874433222 123444567778877
Q ss_pred hcCCHHHHHHHHHHHHHH
Q 002314 544 TTHTAQEWAETFVSELND 561 (937)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~ 561 (937)
+.|++..-++.+++.++.
T Consensus 558 e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 558 ERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhCCHHHHHHHHHHHHHh
Confidence 669999999988877654
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=8e-20 Score=211.27 Aligned_cols=285 Identities=14% Similarity=0.115 Sum_probs=198.7
Q ss_pred CCCCEEEEeCcccch--HHHHHHhhCCCCeEEEEEccCCCchhhh-ccCc--cc----hHHHHh-hhcCCEEEEeCHHHH
Q 002314 230 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIH-RTLP--SR----SDLLRA-VLAADLVGFHTYDYA 299 (937)
Q Consensus 230 ~~~DvVwvHDyhl~l--lp~~Lr~~~~~~~I~~flH~PfPs~e~f-r~lp--~r----~eil~~-ll~aDlIgF~t~~~~ 299 (937)
...|+||+|...++. ....+++ ..+.|+++.+|--||..-.- ...+ .. ..+.+. +..+|.|.+.+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 457999999866542 2233443 34667887777655532110 0010 00 011111 335888888888666
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccC
Q 002314 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 376 (937)
Q Consensus 300 ~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~K 376 (937)
+.+.. .+ ....++.++|+|||.+.|.+... .....+++++ .++.+|+++||+.+.|
T Consensus 184 ~~~~~-----~~-----------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KG-----------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cC-----------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 65432 11 22457889999999998865321 1123355555 3567899999999999
Q ss_pred CHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002314 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (937)
Q Consensus 377 Gi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~al 456 (937)
|+..+++|++++ +++|+ +.|+++| +++.. +++++++.+.+. ..|+| .|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG-----~g~~~----~~l~~~~~~~~l-------~~v~f-~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICG-----QGGGK----ARLEKMAQCRGL-------PNVHF-LPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEEC-----CChhH----HHHHHHHHHcCC-------CceEE-eCCCCHHHHHHH
Confidence 999999999876 44565 4577775 33332 345555544331 24665 689999999999
Q ss_pred HHHccEEEECCCCcCC----ChhHHHHHHhcCCCCceEEEeCCCCc--ccccCCceEEECCCCHHHHHHHHHHHHcCCHH
Q 002314 457 YAVTDVALVTSLRDGM----NLVSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 530 (937)
Q Consensus 457 y~~ADv~vv~Sl~EG~----nLv~~EamAc~~~~~g~lVlSe~aG~--~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~ 530 (937)
|+.||++|+||..|++ +...+|||||+ .|+|+|..+|. .+.+..+|++|+|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 9999999999999985 44579999994 78888887774 344446899999999999999999999865 5
Q ss_pred HHHHHHHhhhhhhh-cCCHHHHHHHHHHHHHHhH
Q 002314 531 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 563 (937)
Q Consensus 531 er~~r~~~~~~~V~-~~~~~~W~~~fl~~l~~~~ 563 (937)
++..+.+++++++. .|++...+++|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 67778888888875 6999999999998887654
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-20 Score=207.41 Aligned_cols=265 Identities=20% Similarity=0.218 Sum_probs=190.6
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+|++|..+...+..++.+ ..++|+.+.+|-.++... .... .+..+|.+.+.+......+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~------~~~~---~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNF------RYNA---IMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHH------HHHH---HHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 469999998776555555444 347899999997665322 1122 23468988887765554443 112
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHHHHHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af~~ 387 (937)
+. ...++.++|+|||...|.+.... ......+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 21 23578899999999888653221 12222355554 356789999999999999999999999
Q ss_pred hHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002314 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (937)
Q Consensus 388 ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~S 467 (937)
+.+.++++ .|+++|... ....+.+++.+.+.+.+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 210 l~~~~~~~----~l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~-~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPDV----HLLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTF-VGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCCe----EEEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEE-cCC--cccHHHHHHhCCEEEecC
Confidence 98876654 477777432 1123444454455443211 13565 555 678999999999999999
Q ss_pred -CCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 468 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 468 -l~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|+++++++|..++...++++.++.++++++++
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999994 799999988887777 457999999999999999998888788888888888888875
Q ss_pred c
Q 002314 545 T 545 (937)
Q Consensus 545 ~ 545 (937)
+
T Consensus 348 ~ 348 (355)
T cd03819 348 T 348 (355)
T ss_pred H
Confidence 4
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-19 Score=213.27 Aligned_cols=275 Identities=16% Similarity=0.103 Sum_probs=188.7
Q ss_pred CCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCc-hhhhccCc-cc---hHHHHhhhcCCEEEEeCHHHHHHHH
Q 002314 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS-SEIHRTLP-SR---SDLLRAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 229 ~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs-~e~fr~lp-~r---~eil~~ll~aDlIgF~t~~~~~~Fl 303 (937)
...+|+|+++-..... +..+ +..+.++++.++|.-.-. ...-...+ +. +..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4577999887655443 3333 556789999999964211 00000000 11 1223444456888777765444332
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 383 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~ 383 (937)
..... +.+...+|.++|+|++...+.+. ....+..|++||||.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 12234578899999876543321 0123468999999999999999999
Q ss_pred HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002314 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (937)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (937)
|+.++.++.|+++ |+++|. +++ .+++++++.+.+. .+ .|. +.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~~----l~i~G~-----G~~----~~~l~~~i~~~~l----~~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPELT----FDIYGE-----GGE----KQKLQKIINENQA----QD--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCeE----EEEEEC-----chh----HHHHHHHHHHcCC----CC--eEE-EcCCC---CHHHHHHhCCEE
Confidence 9999999999754 777763 333 2455566655432 11 355 46654 577899999999
Q ss_pred EECCCCcCCChhHHHHHHhcCCCCceEEEeCCC-Cccccc--CCceEEECC----CC----HHHHHHHHHHHHcCCHHHH
Q 002314 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 532 (937)
Q Consensus 464 vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~a-G~~~~l--g~~gllVnP----~D----~~~lA~aI~~aL~m~~~er 532 (937)
|+||.+||||++++|||||+ .|+|+|... |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999994 788888876 666666 789999984 33 8899999999994 3467
Q ss_pred HHHHHhhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 533 EKRHWHNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 533 ~~r~~~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
.++.+++++.++.+++..-++++.+-+++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 77788888989999999988888766543
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.4e-20 Score=204.03 Aligned_cols=281 Identities=20% Similarity=0.162 Sum_probs=192.3
Q ss_pred CCCEEEEeCcccch---HHHHHHh--hCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMF---LPKCLKE--YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~l---lp~~Lr~--~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~ 305 (937)
..|+|++|+++-.. ....+.. ...+.|+.+.+|...+...... ........+-.+|.|.+.+.+.++.+...
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 152 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELLRALLLR 152 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHHHHHHhh
Confidence 45899998733211 1111111 2368899999998622211111 01112223446899998874444444420
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAF 385 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af 385 (937)
....++.++|+|+|...+..... . +. .....++++|+++||+.+.||+..+++|+
T Consensus 153 -----------------~~~~~~~~i~~~~~~~~~~~~~~------~-~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a~ 207 (366)
T cd03822 153 -----------------AYPEKIAVIPHGVPDPPAEPPES------L-KA-LGGLDGRPVLLTFGLLRPYKGLELLLEAL 207 (366)
T ss_pred -----------------cCCCcEEEeCCCCcCcccCCchh------h-Hh-hcCCCCCeEEEEEeeccCCCCHHHHHHHH
Confidence 01357889999999876653210 1 11 11224678999999999999999999999
Q ss_pred HHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002314 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (937)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 465 (937)
+.+.+++|++ .|+++|.... ... .......+++.+.+ .. ..|.++.+.++.+++..+|+.||++++
T Consensus 208 ~~~~~~~~~~----~l~i~G~~~~-~~~---~~~~~~~~~i~~~~----~~--~~v~~~~~~~~~~~~~~~~~~ad~~v~ 273 (366)
T cd03822 208 PLLVAKHPDV----RLLVAGETHP-DLE---RYRGEAYALAERLG----LA--DRVIFINRYLPDEELPELFSAADVVVL 273 (366)
T ss_pred HHHHhhCCCe----EEEEeccCcc-chh---hhhhhhHhHHHhcC----CC--CcEEEecCcCCHHHHHHHHhhcCEEEe
Confidence 9998887765 4777764221 111 11111002233322 11 246665555999999999999999999
Q ss_pred CCCCc--CCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 466 TSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 466 ~Sl~E--G~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
||..| |++++++|||||+ .|+|+|..+| .+++ +.+|+++++.|+++++++|.++++++ +++.++.++.++
T Consensus 274 ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 347 (366)
T cd03822 274 PYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARARE 347 (366)
T ss_pred cccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHH
Confidence 99999 9999999999994 7889898888 6666 56799999999999999999999865 466777788889
Q ss_pred hhhcCCHHHHHHHHHHHH
Q 002314 542 HVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 542 ~V~~~~~~~W~~~fl~~l 559 (937)
+++++++..+++++++.+
T Consensus 348 ~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 348 YARAMSWERVAERYLRLL 365 (366)
T ss_pred HHhhCCHHHHHHHHHHHh
Confidence 998899999999887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-19 Score=210.21 Aligned_cols=322 Identities=13% Similarity=0.099 Sum_probs=192.3
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc-hHHHHhhhcCCE--EEEeCHHHHHHHHHH-
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADL--VGFHTYDYARHFVSA- 305 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r-~eil~~ll~aDl--IgF~t~~~~~~Fl~~- 305 (937)
.+.|++|.|||+......+||++.++++.+|+.|- +++.|.+-.. ..+-..|-..|. -.=...-+.++.+..
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHA----T~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHA----TLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecc----cccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 46899999999999999999988899999999994 4555542211 011100000000 000000012222221
Q ss_pred ----HHHHhCcc-cCCC-ceeeCCeeeEEEEEecccChhhhhhhhcCC----chHHHHHH-----HHHHhc---CCcEEE
Q 002314 306 ----CTRILGFE-GTPE-GVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE-----LQETFA---GRKVML 367 (937)
Q Consensus 306 ----~~r~lg~~-~~~~-~v~~~gr~~~i~v~P~GID~~~f~~~~~~~----~~~~~~~~-----lr~~~~---~~~iIL 367 (937)
+++++.++ ++.. .....++...+ |+|||||++.|.+..... ..++.+.. ++.+|+ ++++++
T Consensus 223 aa~~Ad~fttVS~it~~E~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~ 301 (590)
T cd03793 223 AAHCAHVFTTVSEITAYEAEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYF 301 (590)
T ss_pred HHhhCCEEEECChHHHHHHHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEE
Confidence 11111110 0011 11233444333 999999999987542110 01112222 344442 677888
Q ss_pred E-Eecccc-cCCHHHHHHHHHHhHHhCcCcc-CcEEEEEEEcCCCCCh---------hHHHHHHHHHHHHHHHhhcc---
Q 002314 368 G-VDRLDM-IKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDV---------PEYQRLTSQVHEIVGRINGR--- 432 (937)
Q Consensus 368 ~-VdRld~-~KGi~~~l~Af~~ll~~~P~~~-~~v~Lvqi~~p~r~~~---------~~y~~l~~~l~~lv~~IN~~--- 432 (937)
+ +||+++ .||++.+|+|+.++-..--.-. ++.|+..+..|+.... .-.++|++.++++..+|+.+
T Consensus 302 f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~ 381 (590)
T cd03793 302 FTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFE 381 (590)
T ss_pred EEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhh
Confidence 8 899999 9999999999998855211111 1223334445665432 12344555555555555444
Q ss_pred -----------------------------------------------------------cC-CCCcccEEEeCCCCC---
Q 002314 433 -----------------------------------------------------------FG-TLTAVPIHHLDRSLD--- 449 (937)
Q Consensus 433 -----------------------------------------------------------~g-~~~~~pV~~~~~~v~--- 449 (937)
|. ..+...|+|...+++
T Consensus 382 ~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~ 461 (590)
T cd03793 382 AALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTN 461 (590)
T ss_pred HhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCC
Confidence 10 122345665544444
Q ss_pred ---HHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc----cccC---CceEEEC-------CC
Q 002314 450 ---FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG---AGAILVN-------PW 512 (937)
Q Consensus 450 ---~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~----~~lg---~~gllVn-------P~ 512 (937)
..+...+|+.||+||+||++||||++++|||||+ .|+|+|..+|.. +.++ ..|+.|. +.
T Consensus 462 ~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e 537 (590)
T cd03793 462 PLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDE 537 (590)
T ss_pred CcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHH
Confidence 3457888999999999999999999999999994 899999999884 4443 3578887 45
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHH
Q 002314 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 560 (937)
+++++|++|.+.++++..++........+....++|.+-+..+++.-.
T Consensus 538 ~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 538 SVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 678999999999977643333332233366678888888887776544
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.6e-20 Score=221.25 Aligned_cols=281 Identities=14% Similarity=0.081 Sum_probs=185.4
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEE-EEccCC--CchhhhccCccchHHHHhhhcCCEEEEe--CHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPF--PSSEIHRTLPSRSDLLRAVLAADLVGFH--TYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~-flH~Pf--Ps~e~fr~lp~r~eil~~ll~aDlIgF~--t~~~~~~Fl~~ 305 (937)
..||||+|.+.-.++..+..+. ..+|+.+ .+|+-. ...+.++. ....+...+..++.+.+. +....+.|..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~- 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALL-AGVPRIVLSVRTMPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD- 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCCCccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH-
Confidence 4699999998887777766654 3566554 556521 11121110 011122333333433322 2222222221
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc-CCcEEEEEecccccCCHHHHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLLA 384 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIL~VdRld~~KGi~~~l~A 384 (937)
.++ ....+|.++|||||++.|.+. +...+....++.... +..+|++|||+++.||+..+|+|
T Consensus 476 ---~~g-----------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A 538 (694)
T PRK15179 476 ---WLG-----------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEA 538 (694)
T ss_pred ---HcC-----------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHH
Confidence 111 234688999999999888532 111111122222222 45688899999999999999999
Q ss_pred HHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
|..+++++|+++ |+++|. ++. ++++++++.+.+.. ..|+ |.|.. +++..+|+.||+||
T Consensus 539 ~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~lgL~------~~V~-flG~~--~dv~~ll~aaDv~V 596 (694)
T PRK15179 539 AQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRLGMG------ERIL-FTGLS--RRVGYWLTQFNAFL 596 (694)
T ss_pred HHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHcCCC------CcEE-EcCCc--chHHHHHHhcCEEE
Confidence 999999998764 877763 222 34455666554421 1355 56765 47899999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCH--HHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~--~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
+||.+|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.++++
T Consensus 597 lpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~ar 671 (694)
T PRK15179 597 LLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKAA 671 (694)
T ss_pred eccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHHH
Confidence 9999999999999999994 789999988888888 668999998875 689999999887543 2233445667
Q ss_pred hhh-hcCCHHHHHHHHHHHH
Q 002314 541 THV-TTHTAQEWAETFVSEL 559 (937)
Q Consensus 541 ~~V-~~~~~~~W~~~fl~~l 559 (937)
+++ +.|++..-++++++-.
T Consensus 672 ~~a~~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 672 DWASARFSLNQMIASTVRCY 691 (694)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 776 5789998888876543
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-20 Score=206.76 Aligned_cols=276 Identities=19% Similarity=0.179 Sum_probs=199.6
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCch--hhhcc---CccchHHHHhhhcCCEEEEeCHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~--e~fr~---lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
...|+||+|++..... +..+.++.+.+|-.+|.. ..+.. ...+..+...+..+|.+.+.+...+..+..
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 4679999999877765 356889999999765422 11111 112233455566789998888766665544
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~A 384 (937)
. .+ ....++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~~-----------~~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----LG-----------VPPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----hC-----------cCHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1 11 12457889999999887754211 11 1111222577899999999999999999999
Q ss_pred HHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
+..+.+.+|++ .|+++|.... .+......+ .+.+ .. ..|+ +.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~~----~l~i~G~~~~----~~~~~~~~~----~~~~----~~--~~v~-~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPDP----KLVIVGKRGW----LNEELLARL----RELG----LG--DRVR-FLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCCC----CEEEecCCcc----ccHHHHHHH----HHcC----CC--CeEE-ECCCCChhHHHHHHhhhhhhc
Confidence 99999888754 4777764321 111112221 1111 11 1344 589999999999999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
+||..||+|++++|||+|+ .|+|+|+.+|..+.++.+|+++++.|.++++++|.++++++ +.+..+.+++++++.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLEDP-ALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHH
Confidence 9999999999999999994 78888888887777778899999999999999999998754 567777777888889
Q ss_pred cCCHHHHHHHHH
Q 002314 545 THTAQEWAETFV 556 (937)
Q Consensus 545 ~~~~~~W~~~fl 556 (937)
.++|+.++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999999875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=203.68 Aligned_cols=252 Identities=18% Similarity=0.078 Sum_probs=172.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHH-HHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~ei-l~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
+.|+|++|..+...++.++.+......+.+..|..+...+.+........+ ...+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 569999999887777777666555555667778765443322211110011 112234677666665444433220
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHHHHH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af~ 386 (937)
....++.++|+|||.+.|..... ..+ . ++.+ .++.+|+++||+.+.||++.+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~---~-~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRK---K-RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhh---H-HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 12357889999999988764321 111 1 2222 46788999999999999999999999
Q ss_pred HhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002314 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (937)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (937)
.+.+++|+++ |+++|. ++... .+++++.+.+. . ..|++ .|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~~~----l~ivG~-----g~~~~----~~~~~~~~~~~----~--~~v~~-~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPNAK----LLLVGD-----GELEE----EIKKKVKELGL----E--DKVIF-LGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCCeE----EEEEeC-----CchHH----HHHHHHHhcCC----C--CcEEE-ecc--cCCHHHHHHhcCEEEec
Confidence 9999888754 777763 33222 33334433221 1 23554 555 67899999999999999
Q ss_pred CCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCC-ceEEECCCCHHHHHHHHHHHHcCCHHHH
Q 002314 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEER 532 (937)
Q Consensus 467 Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~-~gllVnP~D~~~lA~aI~~aL~m~~~er 532 (937)
|..||||++++|||||+ .|+|+|+.+|..+.++. ++++..+.+++++|++|.++++++..++
T Consensus 274 s~~E~~~~~~lEAma~G----~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~ 336 (358)
T cd03812 274 SLYEGLPLVLIEAQASG----LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRER 336 (358)
T ss_pred ccccCCCHHHHHHHHhC----CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhh
Confidence 99999999999999994 89999999998888843 4555566678999999999999886443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-19 Score=207.75 Aligned_cols=271 Identities=14% Similarity=0.114 Sum_probs=192.2
Q ss_pred CCCEEEEeCcccc-hHHHHHHhhCCCCeEEEEEccCCCchhh--hccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEI--HRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 231 ~~DvVwvHDyhl~-llp~~Lr~~~~~~~I~~flH~PfPs~e~--fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
+.|+++.|-++.. ....+++++....++....|......+. ...++.++.+ +-.+|.|.+.+....+.+..
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~--- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQK--- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHH---
Confidence 5577777655543 3334566665555688888853111111 1111222222 34689999888866554432
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ 387 (937)
..+ ....++.++|+|+|...+.... ...++..|+++||+.+.||++.+++|+.+
T Consensus 201 -~~~-----------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~ 254 (407)
T cd04946 201 -RYP-----------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAA 254 (407)
T ss_pred -HCC-----------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHH
Confidence 111 2245778999999987664320 01356789999999999999999999999
Q ss_pred hHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH--ccEEEE
Q 002314 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALV 465 (937)
Q Consensus 388 ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~--ADv~vv 465 (937)
+.+.+|+.. +.++.+|. ++.. +.+++++.+.+ .. ..|+ +.|.++.+++.++|+. ||+|+.
T Consensus 255 l~~~~p~~~--l~~~iiG~-----g~~~----~~l~~~~~~~~----~~--~~V~-f~G~v~~~e~~~~~~~~~~~v~v~ 316 (407)
T cd04946 255 LAKARPSIK--IKWTHIGG-----GPLE----DTLKELAESKP----EN--ISVN-FTGELSNSEVYKLYKENPVDVFVN 316 (407)
T ss_pred HHHhCCCce--EEEEEEeC-----chHH----HHHHHHHHhcC----CC--ceEE-EecCCChHHHHHHHhhcCCCEEEe
Confidence 999888764 66666653 3333 33444443221 11 1355 5899999999999986 789999
Q ss_pred CCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECC-CCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh
Q 002314 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP-WNITEVANAIARALNMSPEEREKRHWHNFTH 542 (937)
Q Consensus 466 ~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP-~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (937)
||..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++++| .|++++|++|.+++++ ++++.++.++++++
T Consensus 317 ~S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~ 391 (407)
T cd04946 317 LSESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREK 391 (407)
T ss_pred CCccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 999999999999999994 799999999988888 457899987 4899999999999985 46778888888888
Q ss_pred h-hcCCHHHHHHHHH
Q 002314 543 V-TTHTAQEWAETFV 556 (937)
Q Consensus 543 V-~~~~~~~W~~~fl 556 (937)
+ +.|++..+.++|+
T Consensus 392 ~~~~f~~~~~~~~~~ 406 (407)
T cd04946 392 WEENFNASKNYREFA 406 (407)
T ss_pred HHHHcCHHHhHHHhc
Confidence 7 6799999988875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-19 Score=200.39 Aligned_cols=278 Identities=17% Similarity=0.200 Sum_probs=186.8
Q ss_pred CCCCCEEEEeCcccc-hHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHH------HHhhhcCCEEEEeCHHHHHH
Q 002314 229 YKDGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL------LRAVLAADLVGFHTYDYARH 301 (937)
Q Consensus 229 ~~~~DvVwvHDyhl~-llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~ei------l~~ll~aDlIgF~t~~~~~~ 301 (937)
....|+|++|+...+ ..+.....+..+.++.++.|..++....... +....+ ...+..+|.|.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 346799999984332 2222221223478889999976654321000 011100 11223456666665433222
Q ss_pred HHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCH
Q 002314 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 378 (937)
Q Consensus 302 Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi 378 (937)
.. ..+...++.++|+|+|.+.|..... . . . ++.+ .++++|+++||+++.||+
T Consensus 164 ~~-----------------~~~~~~~~~vi~~~~~~~~~~~~~~---~--~--~-~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IR-----------------RLGLKAPIAVIPNGVDIPPFAALPS---R--G--R-RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HH-----------------hhCCcccEEEcCCCcChhccCcchh---h--h--h-hhhccCCCCCcEEEEEeCcchhcCH
Confidence 11 1123457889999999988864311 0 0 1 3333 367899999999999999
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (937)
..+++|+..+.+++|+++ |+++|... +.+ ...++.++.+.+ .. ..|+ +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~---~~~~~~~~~~~~----~~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDWH----LVIAGPDE----GGY---RAELKQIAAALG----LE--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCeE----EEEECCCC----cch---HHHHHHHHHhcC----cc--ceEE-EcCCCChHHHHHHHh
Confidence 999999999998888754 77776421 112 122333333322 11 1355 589999999999999
Q ss_pred HccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccC-CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 002314 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (937)
Q Consensus 459 ~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg-~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 537 (937)
.||++|+||..||||++++|||+|+ .|+|+|..+|..+.+. ..|++++ .+.++++++|.++++++ +++..+.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVVD-DDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEeC-CChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999994 7999999888888773 3455554 56699999999999987 67777778
Q ss_pred hhhhh-hhcCCHHHHHHHHH
Q 002314 538 HNFTH-VTTHTAQEWAETFV 556 (937)
Q Consensus 538 ~~~~~-V~~~~~~~W~~~fl 556 (937)
+++++ .+.+++..-+++++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88887 58889988888765
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-20 Score=210.70 Aligned_cols=188 Identities=15% Similarity=0.074 Sum_probs=130.2
Q ss_pred eEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEec-c-cccCCHHHHHHHHHHhHHhCcCccCcEEEEE
Q 002314 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR-L-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (937)
Q Consensus 326 ~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdR-l-d~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvq 403 (937)
.++.++|+|||++.+....... ..+ ...++++|++|+| + ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 5788999999975432211100 001 1246788999999 4 5789999999999875 23 356877
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 404 i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
+|... ... . ..|.++....+.+++..+|+.||+||+||..||||+|++|||||+
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 76421 100 0 124443222367899999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh-hhcCCHHHHHHHHHHHHH
Q 002314 484 DLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTHTAQEWAETFVSELN 560 (937)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-V~~~~~~~W~~~fl~~l~ 560 (937)
.|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... +........++. ...|++..-++++++-.+
T Consensus 331 ----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 331 ----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred ----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 899999999988877 45899999999999998654322110 000112334554 466999999988877554
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-19 Score=196.65 Aligned_cols=267 Identities=19% Similarity=0.180 Sum_probs=192.8
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+||+|..+...+..++..+....+..+.+|.+.. +.. +....+...+-.+|.+.+.+....+.+... .
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI----FRS-PDAIDLDEKLARADFVVAISEYNRQQLIRL----L 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc----ccc-CchHHHHHHHhhCCEEEECCHHHHHHHHHh----c
Confidence 4699999987665555555555557888888885421 111 011233444557999999888766655431 1
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||++.+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 1 2346788999999998876431 0112456789999999999999999999999887
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 469 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~- 469 (937)
..|+ +.|+++|.. +. ..++.+++.+.+. . ..|. +.|.++.+++..+|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~----~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PL----RDELEALIAELGL----E--DRVT-LLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----cc----HHHHHHHHHHcCC----C--CeEE-ECCcCChHHHHHHHHhCCEEEecceec
Confidence 7665 457777632 21 1234444444321 1 1244 58999999999999999999999999
Q ss_pred -----cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh
Q 002314 470 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (937)
Q Consensus 470 -----EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (937)
||||++++|||+|+ .|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++++ +++..+.+++++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDP-ELRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Confidence 99999999999994 788888887777766 45799999999999999999999876 4566677777777
Q ss_pred h-hcCCHHHHHHH
Q 002314 543 V-TTHTAQEWAET 554 (937)
Q Consensus 543 V-~~~~~~~W~~~ 554 (937)
+ ..|++...+++
T Consensus 342 ~~~~~s~~~~~~~ 354 (355)
T cd03799 342 VEEEFDIRKQAAR 354 (355)
T ss_pred HHHhcCHHHHhhc
Confidence 6 56787776653
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=203.62 Aligned_cols=268 Identities=18% Similarity=0.141 Sum_probs=186.6
Q ss_pred CCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCC-CchhhhccCcc---chHHHHhhhcCCEEEEeCHHHHHHHHH
Q 002314 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 229 ~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~Pf-Ps~e~fr~lp~---r~eil~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
...+|+|++|..+.... .+.......++..++|... .........++ .+.++..+-.+|.|.+.+..-.+.+..
T Consensus 97 ~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 174 (372)
T cd04949 97 DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQK 174 (372)
T ss_pred CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHH
Confidence 46789999988776655 2223334556667777532 11110001111 234555566789998888766555543
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~A 384 (937)
. ++ ...++.++|+|++...+.+.. .....+..|+++||+.+.||+..+|+|
T Consensus 175 ~----~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li~a 225 (372)
T cd04949 175 Q----FG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLIKA 225 (372)
T ss_pred H----hC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHHHH
Confidence 1 11 112378999999988765421 011356789999999999999999999
Q ss_pred HHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
+.++.+++|+++ |+++|.+ +.... +.+++.+.+. .. .|. +.|. .+++..+|+.||++|
T Consensus 226 ~~~l~~~~~~~~----l~i~G~g-----~~~~~----~~~~~~~~~~----~~--~v~-~~g~--~~~~~~~~~~ad~~v 283 (372)
T cd04949 226 FAKVVKQVPDAT----LDIYGYG-----DEEEK----LKELIEELGL----ED--YVF-LKGY--TRDLDEVYQKAQLSL 283 (372)
T ss_pred HHHHHHhCCCcE----EEEEEeC-----chHHH----HHHHHHHcCC----cc--eEE-EcCC--CCCHHHHHhhhhEEE
Confidence 999999999865 7777643 22222 2333333221 11 244 4563 467999999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCC-Cccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~a-G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
+||..||||++++|||+|+ .|+|+|+.. |..+.+ |.+|++|+|.|++++|++|.++|+++ +.+.++.+++++
T Consensus 284 ~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~ 358 (372)
T cd04949 284 LTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYE 358 (372)
T ss_pred ecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 9999999999999999994 788888876 666666 67899999999999999999999876 566777778888
Q ss_pred hhhcCCHHHHHHH
Q 002314 542 HVTTHTAQEWAET 554 (937)
Q Consensus 542 ~V~~~~~~~W~~~ 554 (937)
...++++..++++
T Consensus 359 ~~~~~s~~~~~~~ 371 (372)
T cd04949 359 NAERYSEENVWEK 371 (372)
T ss_pred HHHHhhHHHHHhc
Confidence 7888888877654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-19 Score=194.85 Aligned_cols=277 Identities=19% Similarity=0.169 Sum_probs=192.8
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCc-cchHHHHhh-hcCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAV-LAADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp-~r~eil~~l-l~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
..|+|++|+++...+...++......++.+..|..++... .... ....+..-+ -.+|.+.+.+......+...
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--- 154 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAI--- 154 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHHc---
Confidence 4699999999987777776665468889999998654321 0011 111121111 23566655554433332220
Q ss_pred HhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 385 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af 385 (937)
+ ....++.++|+|+|...|.+... ....+++++ .++.+|+++||+.+.||++.+++|+
T Consensus 155 --~-----------~~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 155 --G-----------YPPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred --C-----------CChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 1 12356788999999988764321 112233444 3567889999999999999999999
Q ss_pred HHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHH-HhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG-RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~-~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
..+.+++|++ .|+++|.+. ....+ ..... .. +.. ..|.+ .+. .+++..+|+.||+++
T Consensus 216 ~~l~~~~~~~----~l~i~G~~~-----~~~~~----~~~~~~~~----~~~--~~v~~-~g~--~~~~~~~~~~adi~v 273 (365)
T cd03807 216 ALLLKKFPNA----RLLLVGDGP-----DRANL----ELLALKEL----GLE--DKVIL-LGE--RSDVPALLNALDVFV 273 (365)
T ss_pred HHHHHhCCCe----EEEEecCCc-----chhHH----HHHHHHhc----CCC--ceEEE-ccc--cccHHHHHHhCCEEE
Confidence 9998887765 477776432 11111 12221 21 111 13444 453 468999999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV- 543 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V- 543 (937)
+||..||+|++++|||+|+ .|+|+|..+|..+.+..+|+++++.|+++++++|.++++++ +++.++.+++++++
T Consensus 274 ~ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~ 348 (365)
T cd03807 274 LSSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIE 348 (365)
T ss_pred eCCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHH
Confidence 9999999999999999994 79999999888888755799999999999999999999976 56677777888877
Q ss_pred hcCCHHHHHHHHHHH
Q 002314 544 TTHTAQEWAETFVSE 558 (937)
Q Consensus 544 ~~~~~~~W~~~fl~~ 558 (937)
+.+++..-+++|++.
T Consensus 349 ~~~s~~~~~~~~~~~ 363 (365)
T cd03807 349 ENFSIEAMVEAYEEL 363 (365)
T ss_pred HhCCHHHHHHHHHHH
Confidence 568999999888764
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.8e-19 Score=196.67 Aligned_cols=264 Identities=20% Similarity=0.190 Sum_probs=184.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccch---------HH-HHhhhcCCEEEEeCHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------DL-LRAVLAADLVGFHTYDYAR 300 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~---------ei-l~~ll~aDlIgF~t~~~~~ 300 (937)
..|+|++|+...+........+..++++.+.+|.+|+. +....+... .+ ...+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 45999999875543333322234588999999988762 222222111 11 1223467888877775444
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCC
Q 002314 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 377 (937)
Q Consensus 301 ~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KG 377 (937)
.+.. .+...++.++|+|+|...|.+... .. .++.+ .++++|+++||+.+.||
T Consensus 162 ~~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----------------YGVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----------------cCCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 112345889999999988765321 11 12222 35678999999999999
Q ss_pred HHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 002314 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (937)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (937)
+..+++|+..+.++.+++ .|+++|. ++. ..++++++.+.+. . ..|. +.+.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~~----~l~i~G~-----~~~----~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPDV----KLVIVGD-----GPE----REELEELARELGL----A--DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEEEeC-----Cch----HHHHHHHHHHcCC----C--CcEE-EeccCChHHHHHHH
Confidence 999999999998876654 4777763 222 2334444443331 1 1355 57899999999999
Q ss_pred HHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 002314 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (937)
Q Consensus 458 ~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r 535 (937)
+.||++++||..||+|++++|||+|+ .|+|+|..++..+.+ +.+|+++++.|. +++++|.++++++. .++++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999994 788888888877777 568999999888 99999999999875 44666
Q ss_pred HHhhhhhhhcCC
Q 002314 536 HWHNFTHVTTHT 547 (937)
Q Consensus 536 ~~~~~~~V~~~~ 547 (937)
.++.++++..++
T Consensus 351 ~~~~~~~~~~~~ 362 (374)
T cd03817 351 SKNAEESAEKFS 362 (374)
T ss_pred HHHHHHHHHHHH
Confidence 777788887665
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=197.87 Aligned_cols=191 Identities=15% Similarity=0.197 Sum_probs=123.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.||||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 589999999999975 34689999999999987 699999999999999999988874 4689999
Q ss_pred ceEEEe-cCCe-eeeccccccChhHHHHHHHHHHHHHhc--------CCCceeeeecce-------EEEEeeccChh---
Q 002314 669 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-------LVWNYKYADVE--- 728 (937)
Q Consensus 669 G~~ir~-~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~--------~~Gs~iE~K~~s-------l~~hyr~ad~e--- 728 (937)
|+.+.. .++. +... .+. +.+.++++..... ..+.+....... ..+.+...+.+
T Consensus 67 Ga~I~~~~~~~l~~~~----i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK15126 67 GTRVHSLEGELLHRQD----LPA---DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLP 139 (272)
T ss_pred CcEEEcCCCCEEEeec----CCH---HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcc
Confidence 999985 3322 2222 232 2333333322111 001111000000 00000000000
Q ss_pred ---h-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEe
Q 002314 729 ---F-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (937)
Q Consensus 729 ---~-------~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iG 797 (937)
. ......++...+ ...+. ..+.+. .+..++||.|+++|||+||++|++++| ++.+++++||
T Consensus 140 ~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afG 211 (272)
T PRK15126 140 AHGVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFG 211 (272)
T ss_pred ccCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEec
Confidence 0 001122333333 22222 234544 456799999999999999999999999 6789999999
Q ss_pred cCCCCcHHHHHhcCc
Q 002314 798 HFLGKDEDVYAFFEP 812 (937)
Q Consensus 798 D~d~nDEdMf~~~~~ 812 (937)
| +.||.+||+.++.
T Consensus 212 D-~~NDi~Ml~~ag~ 225 (272)
T PRK15126 212 D-AMNDREMLGSVGR 225 (272)
T ss_pred C-CHHHHHHHHHcCC
Confidence 9 9999999999864
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=197.36 Aligned_cols=194 Identities=16% Similarity=0.218 Sum_probs=128.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc--eEEee
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liae 667 (937)
..++|++|+||||++. +..++++++++|++|.+ +|..|+|+|||++..+.+++..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 4689999999999987 34599999999999986 6999999999999999999999854 69999
Q ss_pred CceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhc--CCCceeeeecceE------------E-----EEeecc---
Q 002314 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQRETSL------------V-----WNYKYA--- 725 (937)
Q Consensus 668 nG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~--~~Gs~iE~K~~sl------------~-----~hyr~a--- 725 (937)
||+++...++. ......+. +.+..+++..... .+..+........ . +.....
T Consensus 67 NGa~i~~~~~~---i~~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLSR---EDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCCH---HHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999975322 21122333 3444444433221 1111111100000 0 000000
Q ss_pred Ch------hhhHHHHHHHHHHHhcCCCCCCCeEEEEcCe-EEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 726 DV------EFGRIQARDMLQHLWTGPISNASVEVVQGSK-SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 726 d~------e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~-~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
+. ........++...+ ...+....+.+.++.. .+||.|+|+|||.|+++|+++++ ++.++|++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 00 00011123333333 3323333456666654 49999999999999999999998 56889999999
Q ss_pred CCCCcHHHHHhcCc
Q 002314 799 FLGKDEDVYAFFEP 812 (937)
Q Consensus 799 ~d~nDEdMf~~~~~ 812 (937)
+.||.+||++++.
T Consensus 214 -~~ND~~Ml~~ag~ 226 (264)
T COG0561 214 -STNDIEMLEVAGL 226 (264)
T ss_pred -ccccHHHHHhcCe
Confidence 9999999999986
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-18 Score=191.31 Aligned_cols=278 Identities=23% Similarity=0.193 Sum_probs=200.8
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhc----cCccchHHHHhhhcCCEEEEeCHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr----~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~ 306 (937)
..|+|++|+++...+.. +..+..+.++.+.+|.+++...... ...........+..+|.+.+.+......+.+
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~-- 161 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRE-- 161 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHh--
Confidence 46999999998887765 3344578999999999876432110 0011122233444678888888766555443
Q ss_pred HHHhCcccCCCceeeCCe-eeEEEEEecccChhhhhhhhcCCchHHHHHHHHHH---hcCCcEEEEEecccccCCHHHHH
Q 002314 307 TRILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPVQVHIKELQET---FAGRKVMLGVDRLDMIKGIPQKL 382 (937)
Q Consensus 307 ~r~lg~~~~~~~v~~~gr-~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~---~~~~~iIL~VdRld~~KGi~~~l 382 (937)
..+. ..++.++|+|+|...+.... ...+.. ..++..|+++||+.+.||+..++
T Consensus 162 --------------~~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i 218 (374)
T cd03801 162 --------------LGGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLL 218 (374)
T ss_pred --------------cCCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHH
Confidence 1111 25788999999998775321 111111 13567899999999999999999
Q ss_pred HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002314 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (937)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (937)
+|+..+.+++|+ +.|+++|. ++.. ..+.+++.+.+. . ..|. +.+.++.+++..+|+.||+
T Consensus 219 ~~~~~~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~~~di 278 (374)
T cd03801 219 EALAKLRKEYPD----VRLVIVGD-----GPLR----EELEALAAELGL----G--DRVT-FLGFVPDEDLPALYAAADV 278 (374)
T ss_pred HHHHHHhhhcCC----eEEEEEeC-----cHHH----HHHHHHHHHhCC----C--cceE-EEeccChhhHHHHHHhcCE
Confidence 999999888765 44777762 2322 233333333221 1 2355 4789999999999999999
Q ss_pred EEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 463 ~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
+++||..||+|++++|||+|+ .|+|++..+|..+.+ +.+|+++++.|+++++++|.++++++ +.++++.++++
T Consensus 279 ~i~~~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~ 353 (374)
T cd03801 279 FVLPSLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAAR 353 (374)
T ss_pred EEecchhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999999999999999994 789999988888887 46899999999999999999999876 45566666666
Q ss_pred -hhhhcCCHHHHHHHHHHHH
Q 002314 541 -THVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 541 -~~V~~~~~~~W~~~fl~~l 559 (937)
...+.+++..+++.+++.+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 354 ERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHhcCHHHHHHHHHHhh
Confidence 4568899999999887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-18 Score=194.83 Aligned_cols=191 Identities=17% Similarity=0.196 Sum_probs=144.9
Q ss_pred EecccChhhhhhhhcCCchHHHHHHHHHH----hcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEc
Q 002314 331 FPIGIDSERFIRALEINPVQVHIKELQET----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (937)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~----~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~ 406 (937)
+|+|||.+.|.+... ...+++++ +.+..+|++|||+++.||+..+++|++++.+++|++..++.|+++|
T Consensus 118 I~~GVD~~~f~p~~~------~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG- 190 (335)
T PHA01633 118 VFHGINFKIVENAEK------LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVIS- 190 (335)
T ss_pred eeCCCChhhcCccch------hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEc-
Confidence 678999999875321 11233333 3466789999999999999999999999999999876667777664
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC--CCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcC
Q 002314 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 484 (937)
Q Consensus 407 p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~ 484 (937)
+ .. +++ . +..+ .|+|+. |.++.+++.++|+.||+||+||..||||++++|||||+
T Consensus 191 ----~-~~-------~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G- 247 (335)
T PHA01633 191 ----H-KQ-------FTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG- 247 (335)
T ss_pred ----H-HH-------HHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC-
Confidence 1 11 111 1 1111 366542 67789999999999999999999999999999999994
Q ss_pred CCCceEEEeCCCCcccccC------------------C--ceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 485 LKKGVLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 485 ~~~g~lVlSe~aG~~~~lg------------------~--~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
.|+|+|..+|..+..| . .|++|+++|++++|++|.+++.+.. +..|..++++..+
T Consensus 248 ---~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~ 322 (335)
T PHA01633 248 ---TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAK 322 (335)
T ss_pred ---CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHH
Confidence 7889998877776543 1 2557889999999999999988763 3344556678899
Q ss_pred cCCHHHHHHHHH
Q 002314 545 THTAQEWAETFV 556 (937)
Q Consensus 545 ~~~~~~W~~~fl 556 (937)
++++..-.++|+
T Consensus 323 ~f~~~~~~~~~~ 334 (335)
T PHA01633 323 KYDIRNLYTRFL 334 (335)
T ss_pred hcCHHHHHHHhh
Confidence 999998888775
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-18 Score=192.73 Aligned_cols=280 Identities=19% Similarity=0.172 Sum_probs=196.7
Q ss_pred CCCCCEEEEeC-cccchHHHHHHhhCCCCeEEEEEccCCCchhhhcc-Cc-------cchHH-HHhhhcCCEEEEeCHHH
Q 002314 229 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-LP-------SRSDL-LRAVLAADLVGFHTYDY 298 (937)
Q Consensus 229 ~~~~DvVwvHD-yhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~-lp-------~r~ei-l~~ll~aDlIgF~t~~~ 298 (937)
....|+|++|. ..+..++........+.++.+.+|..||....... .. ....+ ...+..+|.|.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 34679999998 33444444444445588999999988774322111 11 01111 22344689999999877
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCH
Q 002314 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (937)
Q Consensus 299 ~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi 378 (937)
.+.|.. . .....++.++|+|+|...+.+.... ..... .....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~-----------~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----R-----------GVPPEKISVIPNGVDLELFKPPPAD----ESLRK-ELGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----c-----------CCCcCceEEcCCCCCHHHcCCccch----hhhhh-ccCCCCcEEEEEecCcccccCH
Confidence 766541 1 1124578899999999877643211 00000 0112467889999999999999
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (937)
..+++|+..+.+. |+ +.|+++|. ++....+ .+++... + ...|.+ .+.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~----~~~~~~~----~---~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEEL----KELAKAL----G---LDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHH----HHHHHHc----C---CCcEEE-eCCCChHHHHHHHH
Confidence 9999999998776 55 44776653 2222222 2222211 1 124665 56999999999999
Q ss_pred HccEEEECCCCcCC-----ChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHH
Q 002314 459 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (937)
Q Consensus 459 ~ADv~vv~Sl~EG~-----nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 531 (937)
.||++++||..|++ +++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|+++++++|.++++++ ++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDP-EE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhCh-HH
Confidence 99999999999876 66789999994 799999999988887 35799999999999999999999654 57
Q ss_pred HHHHHHhhhhhhh-cCCHHHHHHHHH
Q 002314 532 REKRHWHNFTHVT-THTAQEWAETFV 556 (937)
Q Consensus 532 r~~r~~~~~~~V~-~~~~~~W~~~fl 556 (937)
+.++.+++++++. .|++..++++++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 7777788888886 899999988763
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.8e-19 Score=195.80 Aligned_cols=272 Identities=23% Similarity=0.192 Sum_probs=191.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc----hHHHH-hhhcCCEEEEeCHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLLR-AVLAADLVGFHTYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r----~eil~-~ll~aDlIgF~t~~~~~~Fl~~ 305 (937)
.+|+|++|......+......+..++|+.+++|..||..-........ ..+.+ ..-.+|.|.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 459999997544322222222234788999999877632111111111 12222 233678888877755542211
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCcEEEEEecccccCCHHHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLL 383 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIL~VdRld~~KGi~~~l~ 383 (937)
....++.++|+|+|.+.|.+.... ...++++ .++++|+++||+.+.||+..+++
T Consensus 162 -----------------~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 -----------------RGFRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred -----------------cCCCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 012467889999999887643211 1112222 35678999999999999999999
Q ss_pred HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002314 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (937)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (937)
|+..+.++ |++ .|+++|. +++...++ ..+ ..|.+ .|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~--------~~~--------~~v~~-~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPV----RLVIVGD-----GPARARLE--------ARY--------PNVHF-LGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCc----eEEEEeC-----CchHHHHh--------ccC--------CcEEE-EeccCHHHHHHHHHhCCEE
Confidence 99999776 654 4777763 22211111 111 24664 6779999999999999999
Q ss_pred EECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 464 vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
++||..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|.++++++|.++++.+ +++.++..++++
T Consensus 271 l~~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 99999999999999999994 789999988888877 36799999999999999999999865 566777778888
Q ss_pred hhhcCCHHHHHHHHHHHH
Q 002314 542 HVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 542 ~V~~~~~~~W~~~fl~~l 559 (937)
.+..+++..+++++++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 888999999999887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-18 Score=191.74 Aligned_cols=282 Identities=22% Similarity=0.209 Sum_probs=196.2
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
...|+|++|......+......+..++++.+..|.+++....... ..+......+..+|.|.+.+......|....
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 456999999655443333333334457888999987653221111 1223334445578999998887666654311
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll 389 (937)
....++.++|+|+|...|.+... .....+ ....++.+|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 12357889999999988764311 011111 11246788999999999999999999999998
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (937)
+++|++ .|+++|. ++... .+.+++...+. . ..|. +.+.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~~----~l~i~g~-----~~~~~----~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPDV----HLVIVGD-----GPLRE----ALEALAAELGL----E--DRVT-FLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCCe----EEEEEcC-----CcchH----HHHHHHHhcCC----c--ceEE-EeCCCCHHHHHHHHHhcCeeecchhh
Confidence 876654 4766653 22222 23333332221 1 1244 57899999999999999999999999
Q ss_pred cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh-hhhhcC
Q 002314 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTTH 546 (937)
Q Consensus 470 EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~-~~V~~~ 546 (937)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+.+ ...+.+
T Consensus 289 ~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 99999999999994 789999988888777 4567999999999999999999998753 3444444 445778
Q ss_pred CHHHHHHHHHHHHHH
Q 002314 547 TAQEWAETFVSELND 561 (937)
Q Consensus 547 ~~~~W~~~fl~~l~~ 561 (937)
++..+++.+++.+++
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 999999988876653
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.8e-18 Score=190.05 Aligned_cols=262 Identities=17% Similarity=0.109 Sum_probs=182.5
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+|++|+.+...+...+... ..++.+..|..++...... .+.......+..+|.|.+.+......+
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~-------- 150 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALY-------- 150 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh--------
Confidence 5699999998732222222221 1478888887654322111 011112333456888888877544110
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
......++.++|+|++...+... ...+++.++++||+.+.||++.+++|+..+.+
T Consensus 151 ----------~~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 151 ----------YKKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred ----------hccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 01123578899999998766432 12357899999999999999999999999988
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (937)
.+|++ .|+++|.. ++. ..+.+++.+.+.. ..|. +.+. .+++..+|+.||++++||..|
T Consensus 206 ~~~~~----~l~i~G~~-----~~~----~~~~~~~~~~~~~------~~v~-~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPDW----KLRIVGDG-----PER----EALEALIKELGLE------DRVI-LLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCCe----EEEEEeCC-----CCH----HHHHHHHHHcCCC------CeEE-EcCC--cchHHHHHHhCCEEEeCcccc
Confidence 77765 47766532 222 2233344443321 1344 4555 689999999999999999999
Q ss_pred CCChhHHHHHHhcCCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCC
Q 002314 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (937)
Q Consensus 471 G~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~ 547 (937)
|||++++|||+|+ .|+|+|...|..+.+ +.+|+++++.|+++++++|.++++++ +.+.++.+++++.++.++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999994 788888876655544 34899999999999999999999865 456666667778889999
Q ss_pred HHHHHHHHH
Q 002314 548 AQEWAETFV 556 (937)
Q Consensus 548 ~~~W~~~fl 556 (937)
+..++++|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 999988774
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.4e-19 Score=191.85 Aligned_cols=186 Identities=16% Similarity=0.194 Sum_probs=124.7
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc---eEEe
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 666 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l---~lia 666 (937)
.+++||+|+||||++. ...+++.++++|++|.+ .|+.|+|+|||+...+..++..+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 5789999999999975 23578899999999986 6999999999999999999888754 6999
Q ss_pred eCceEEEecCC-e----eeeccccccChhHHHHHHHHHHHHHhcCCCcee--e-e----------------------ecc
Q 002314 667 ENGMFLRCTTG-K----WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--E-Q----------------------RET 716 (937)
Q Consensus 667 enG~~ir~~~~-~----w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~i--E-~----------------------K~~ 716 (937)
+||+.+....+ . +. ......+. +.+.++++..... .+..+ . . ...
T Consensus 71 ~NGa~I~~~~~~~~~~~~~-~~~~~l~~---~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDFP-RIISGISH---GEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEA 145 (271)
T ss_pred eCCCEEEecCcccCCCCce-EeecCCCH---HHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhcccc
Confidence 99999985321 1 10 10011222 3334444433221 01100 0 0 000
Q ss_pred eEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCC---CCceE
Q 002314 717 SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT---AIDYV 793 (937)
Q Consensus 717 sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~---~~d~v 793 (937)
...+.+.. +++ ...++.+.+ .. ..+.++.+..++||+|+++|||+|+++|+++++ + +.+++
T Consensus 146 ~~~~~~~~-~~~----~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~v 209 (271)
T PRK03669 146 SVTLIWRD-SDE----RMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTT 209 (271)
T ss_pred CceeEecC-CHH----HHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceE
Confidence 00111110 111 123344444 22 145666666789999999999999999999998 5 78999
Q ss_pred EEEecCCCCcHHHHHhcCc
Q 002314 794 LCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 794 l~iGD~d~nDEdMf~~~~~ 812 (937)
++||| +.||.+||++++.
T Consensus 210 iafGD-s~NDi~Ml~~ag~ 227 (271)
T PRK03669 210 LGLGD-GPNDAPLLDVMDY 227 (271)
T ss_pred EEEcC-CHHHHHHHHhCCE
Confidence 99999 9999999999865
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.9e-19 Score=187.84 Aligned_cols=181 Identities=12% Similarity=0.208 Sum_probs=120.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~n 67 (230)
T PRK01158 3 IKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAEN 67 (230)
T ss_pred eeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEec
Confidence 589999999999975 34588999999999986 699999999999999988877774 4799999
Q ss_pred ceEEEec--CCe-eeeccccccChhHHHHHHHHHHHHHhcCCCc--eeeee--c--ceEEEEeeccChhhhHHHHHHHHH
Q 002314 669 GMFLRCT--TGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQR--E--TSLVWNYKYADVEFGRIQARDMLQ 739 (937)
Q Consensus 669 G~~ir~~--~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs--~iE~K--~--~sl~~hyr~ad~e~~~~~a~el~~ 739 (937)
|+.+... +.. +... .+ .+..+++.+....+.. .+... . ......++..+ ..++.+
T Consensus 68 Ga~i~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 131 (230)
T PRK01158 68 GGVISVGFDGKRIFLGD----IE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP-------VEEVRE 131 (230)
T ss_pred CeEEEEcCCCCEEEEcc----hH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccccc-------HHHHHH
Confidence 9999753 222 2211 11 1222222222222211 11100 0 00011111111 111222
Q ss_pred HHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 740 HLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 740 ~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+ +.. ...+.+..+...+|+.|+++|||.|+++++++++ ++++++++||| +.||++||+.++.
T Consensus 132 ~l-~~~--~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 194 (230)
T PRK01158 132 LL-EEL--GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEMFEVAGF 194 (230)
T ss_pred HH-HHc--CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHHhcCc
Confidence 22 221 1235566666789999999999999999999998 57899999999 9999999998854
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=7e-19 Score=203.59 Aligned_cols=265 Identities=12% Similarity=0.074 Sum_probs=167.6
Q ss_pred CCCEEEEeCcccchH---HHHHHhhCCCCeEEEEEccCCCchhhhccCc--cchHHHHhhhcCCEEEEeCHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFL---PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~ll---p~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp--~r~eil~~ll~aDlIgF~t~~~~~~Fl~~ 305 (937)
.+|+||+|+.-.+.. +..++++. .. ++.++|+.|+ ++++... .....+...+ ..|++.|.
T Consensus 116 ~pDVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~--~Y~~~~~~g~~~~~l~~~~---------~~~~~r~~-- 180 (462)
T PLN02846 116 EADIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYL--EYVKREKNGRVKAFLLKYI---------NSWVVDIY-- 180 (462)
T ss_pred CCCEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChH--HHHHHhccchHHHHHHHHH---------HHHHHHHh--
Confidence 359999999655544 34444444 44 7778999875 4433211 1011111111 12222221
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cC---CcEEEEEecccccCCHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AG---RKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~---~~iIL~VdRld~~KGi~~~ 381 (937)
|+.++.++.. ..++. ..+.+.+.|||++.|.+.... +++.+ ++ .+++++||||.+.||+..+
T Consensus 181 ~d~vi~pS~~--~~~l~---~~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~L 246 (462)
T PLN02846 181 CHKVIRLSAA--TQDYP---RSIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKEL 246 (462)
T ss_pred cCEEEccCHH--HHHHh---hCEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHH
Confidence 3333322210 00010 112334589999988653211 11222 22 3468999999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
|+||..+.+..|+++ |+++| +||+..+ +++++.+++. .+++|.|..+.+ .+|..+|
T Consensus 247 i~a~~~l~~~~~~~~----l~ivG-----dGp~~~~----L~~~a~~l~l--------~~~vf~G~~~~~---~~~~~~D 302 (462)
T PLN02846 247 LKLLHKHQKELSGLE----VDLYG-----SGEDSDE----VKAAAEKLEL--------DVRVYPGRDHAD---PLFHDYK 302 (462)
T ss_pred HHHHHHHHhhCCCeE----EEEEC-----CCccHHH----HHHHHHhcCC--------cEEEECCCCCHH---HHHHhCC
Confidence 999999988888754 77774 5665444 4445544331 234467765544 6899999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
|||+||.+||||+|++|||||+ .|+|+++..| .+.+ +.+|+++ .|.++++++|.++|..++++... +.
T Consensus 303 vFv~pS~~Et~g~v~lEAmA~G----~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a 372 (462)
T PLN02846 303 VFLNPSTTDVVCTTTAEALAMG----KIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ 372 (462)
T ss_pred EEEECCCcccchHHHHHHHHcC----CcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH
Confidence 9999999999999999999994 6788887765 5666 7788888 48999999999999865433221 11
Q ss_pred hhhhhcCCHHHHHHHHHHHHHH
Q 002314 540 FTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 540 ~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
...++|..-+++|+..+.-
T Consensus 373 ---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 373 ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred ---HHhCCHHHHHHHHHHHhcc
Confidence 2478999999988876654
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=202.90 Aligned_cols=263 Identities=12% Similarity=0.115 Sum_probs=165.1
Q ss_pred CCCEEEEeCcccc-hH--HHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHH--
Q 002314 231 DGDVVWCHDYHLM-FL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~-ll--p~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~-- 305 (937)
++|+||+|..-.+ .. +..+.+++ + +++..+||.|+. |++.... ..+..++ ..++.+|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhh
Confidence 5699999985444 44 33344444 3 688899999984 4443221 1111111 1122333332
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---CCcEEEEEecccccCCHHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 382 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIL~VdRld~~KGi~~~l 382 (937)
|+.++.++.... ++. ...|. ..+|||++.|.+.... ... +.++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~~vI~-nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--KSVIC-NVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--cccee-ecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 555554331000 111 11111 1259999998764221 111 2221 224589999999999999999
Q ss_pred HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002314 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (937)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (937)
+|+..+.++.|++ .|+++| ++++.. ++++++.+++. .|.| .|..+ +...+|+.+||
T Consensus 566 eAla~L~~~~pnv----rLvIVG-----DGP~re----eLe~la~eLgL--------~V~F-LG~~d--d~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDGF----NLDVFG-----NGEDAH----EVQRAAKRLDL--------NLNF-LKGRD--HADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCCe----EEEEEc-----CCccHH----HHHHHHHHcCC--------EEEe-cCCCC--CHHHHHHhCCE
Confidence 9999988877765 477775 455433 44445544331 2555 45433 33479999999
Q ss_pred EEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 463 ~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
||+||.+||||+|++|||||+ .|||++...|. +.+ |.+|++. .|.++++++|.++|.+++ ++..+ .
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~-~--- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTP-E--- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHH-H---
Confidence 999999999999999999994 78888888774 334 4566654 789999999999999775 22221 1
Q ss_pred hhhhcCCHHHHHHHHHHH
Q 002314 541 THVTTHTAQEWAETFVSE 558 (937)
Q Consensus 541 ~~V~~~~~~~W~~~fl~~ 558 (937)
....++|..-+++|+..
T Consensus 690 -a~~~~SWeAaadrLle~ 706 (794)
T PLN02501 690 -QRYNLSWEAATQRFMEY 706 (794)
T ss_pred -HHhhCCHHHHHHHHHHh
Confidence 13377888888877654
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-18 Score=195.89 Aligned_cols=239 Identities=15% Similarity=0.134 Sum_probs=165.8
Q ss_pred HHhCCCCCEEEEeCcccchHHHHHHhh-CCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHH
Q 002314 226 NKHYKDGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 226 ~~~~~~~DvVwvHDyhl~llp~~Lr~~-~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
.+..+ .|+||+|++....+..++++. ....++..+.|..++....+. ...+..+|.+...+....+.+..
T Consensus 80 l~~~~-~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~ 150 (359)
T PRK09922 80 LKETQ-PDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA 150 (359)
T ss_pred HHhcC-CCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH
Confidence 33334 599999998777666666654 233455666676543221111 12235788888877655444432
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEeccc--ccCCHHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQKL 382 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld--~~KGi~~~l 382 (937)
.++ ...++.++|+|||.+.|.... + ...++++|+++||+. ..||+..++
T Consensus 151 -----~~~-----------~~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~k~~~~l~ 201 (359)
T PRK09922 151 -----RGI-----------SAQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQKNVKELF 201 (359)
T ss_pred -----cCC-----------CHHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccCcCHHHHH
Confidence 121 234688899999976653211 1 013467899999996 469999999
Q ss_pred HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC--CHHHHHHHHHHc
Q 002314 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL--DFPALCALYAVT 460 (937)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v--~~~el~aly~~A 460 (937)
+|+.++. + ++.|+++|. +++. +++++++++.|.. ..|+| .|.+ +.+++..+|+.|
T Consensus 202 ~a~~~~~---~----~~~l~ivG~-----g~~~----~~l~~~~~~~~l~------~~v~f-~G~~~~~~~~~~~~~~~~ 258 (359)
T PRK09922 202 DGLSQTT---G----EWQLHIIGD-----GSDF----EKCKAYSRELGIE------QRIIW-HGWQSQPWEVVQQKIKNV 258 (359)
T ss_pred HHHHhhC---C----CeEEEEEeC-----CccH----HHHHHHHHHcCCC------CeEEE-ecccCCcHHHHHHHHhcC
Confidence 9998762 2 356887863 3332 3444555544321 13554 6765 458999999999
Q ss_pred cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeC-CCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCH
Q 002314 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (937)
Q Consensus 461 Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe-~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (937)
|++|+||..||||++++|||||+ .|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++.+.
T Consensus 259 d~~v~~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 259 SALLLTSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred cEEEECCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999999994 7999998 78877777 678999999999999999999998874
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-19 Score=193.98 Aligned_cols=195 Identities=15% Similarity=0.220 Sum_probs=123.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc-----eE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-----~l 664 (937)
..||||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++ ++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 66 (270)
T PRK10513 2 AIKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYC 66 (270)
T ss_pred ceEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeE
Confidence 3689999999999976 34689999999999987 6999999999999999988887753 58
Q ss_pred EeeCceEEEe--cCCe-eeeccccccChhHHHHHHHHHHHHHh-----cCCCceeeeecce-----------EEEEeecc
Q 002314 665 AAENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTE-----RTPRSHFEQRETS-----------LVWNYKYA 725 (937)
Q Consensus 665 iaenG~~ir~--~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~-----~~~Gs~iE~K~~s-----------l~~hyr~a 725 (937)
|+.||+.+.. .++. +... .+.+....+.++++...- ...+.+...+... +...+...
T Consensus 67 I~~NGa~i~~~~~~~~i~~~~----l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (270)
T PRK10513 67 ITNNGALVQKAADGETVAQTA----LSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREV 142 (270)
T ss_pred EEcCCeEEEECCCCCEEEecC----CCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccch
Confidence 9999999985 2322 3222 232222223333322100 0011111111100 00000000
Q ss_pred ---Ch--hh------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCce
Q 002314 726 ---DV--EF------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDY 792 (937)
Q Consensus 726 ---d~--e~------~-~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~ 792 (937)
++ .. . .....++...+ ...+. ..+.++ .+..++||.|+|+|||.||++|+++++ ++.++
T Consensus 143 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~~~~ 214 (270)
T PRK10513 143 EKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IKPEE 214 (270)
T ss_pred hhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CCHHH
Confidence 00 00 0 01112222333 21111 234544 467899999999999999999999998 57899
Q ss_pred EEEEecCCCCcHHHHHhcCc
Q 002314 793 VLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 793 vl~iGD~d~nDEdMf~~~~~ 812 (937)
+++||| +.||.+||+.++.
T Consensus 215 v~afGD-~~NDi~Ml~~ag~ 233 (270)
T PRK10513 215 VMAIGD-QENDIAMIEYAGV 233 (270)
T ss_pred EEEECC-chhhHHHHHhCCc
Confidence 999999 9999999999864
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.82 E-value=3e-18 Score=197.35 Aligned_cols=281 Identities=16% Similarity=0.132 Sum_probs=180.0
Q ss_pred HHHHHHHHHhC--CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccC----CCchhhhccCccch----------HHH
Q 002314 219 QMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP----FPSSEIHRTLPSRS----------DLL 282 (937)
Q Consensus 219 ~~fA~~i~~~~--~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~P----fPs~e~fr~lp~r~----------eil 282 (937)
..+...+.+.. .+.|+|++|...+. .++.....++|..+..|-- |+..-.....|.+. .+-
T Consensus 90 ~~~~~~l~~~~~~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 166 (397)
T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYE 166 (397)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHH
Confidence 34444555554 35699999864332 3343233467777777742 21100000111110 000
Q ss_pred -HhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-
Q 002314 283 -RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF- 360 (937)
Q Consensus 283 -~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~- 360 (937)
..+-.+|.|.+.+....+.+.+ .. .....++.++|+|||.+.|.+..... ..+
T Consensus 167 ~~~~~~ad~vi~~S~~~~~~l~~----~~-----------~~~~~~v~vipngvd~~~f~~~~~~~----------~~~~ 221 (397)
T TIGR03087 167 RAIAARFDAATFVSRAEAELFRR----LA-----------PEAAGRITAFPNGVDADFFSPDRDYP----------NPYP 221 (397)
T ss_pred HHHHhhCCeEEEcCHHHHHHHHH----hC-----------CCCCCCeEEeecccchhhcCCCcccc----------CCCC
Confidence 1223567777777665554432 10 11235788999999999886532110 011
Q ss_pred cCCcEEEEEecccccCCHHHHH----HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCC
Q 002314 361 AGRKVMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (937)
Q Consensus 361 ~~~~iIL~VdRld~~KGi~~~l----~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~ 436 (937)
.++++|+++||+++.||++.++ +++..+.+++|+++ |+++|. +++ .+++++...
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~-----g~~-----~~~~~l~~~-------- 279 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGA-----KPS-----PAVRALAAL-------- 279 (397)
T ss_pred CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECC-----CCh-----HHHHHhccC--------
Confidence 3567899999999999999887 56666777788765 777753 221 123333211
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-CCceEEECCCCH
Q 002314 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWNI 514 (937)
Q Consensus 437 ~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~ 514 (937)
..|+ +.|.++ ++..+|+.||++|+||. .||++++++|||||+ .|+|+|..++..... +..|++|. .|+
T Consensus 280 --~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~-~~~ 349 (397)
T TIGR03087 280 --PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA-ADP 349 (397)
T ss_pred --CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-CCH
Confidence 1355 467876 68899999999999997 599999999999994 688888754321111 34688886 899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHH
Q 002314 515 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (937)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~ 560 (937)
+++|++|.++++++ +.+.++.+++++++ +.|+|...++++.+-+.
T Consensus 350 ~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 350 ADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 99999999999864 56777778888887 67999999998876553
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.9e-18 Score=187.49 Aligned_cols=258 Identities=19% Similarity=0.208 Sum_probs=177.2
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+|++|.+..+.++.+...+..++|+.+++|-.++.. +....+.. ..|.+...+....+.|..
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~~---~~d~ii~~s~~~~~~~~~------ 160 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFKK---GGDAVIAPSRFLLDRYVA------ 160 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhcc---CCCEEEEeCHHHHHHHHH------
Confidence 359999998755543333222234689999999654321 11111111 128888887765555443
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
+.....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 161 ----------~~~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 161 ----------NGLFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred ----------cCCCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 0111357899999999987754211 012456789999999999999999999998866
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-~ 469 (937)
++ +.|+++|... ......... ..+ ..|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G~~~-----~~~~~~~~~-----~~~--------~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVGNGL-----ELEEESYEL-----EGD--------PRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEcCch-----hhhHHHHhh-----cCC--------CeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 44 4577776432 111111111 111 1355 4789999999999999999999997 7
Q ss_pred cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCC
Q 002314 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (937)
Q Consensus 470 EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~ 547 (937)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++.+ +.++.+.++.++.+..
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHHhHHHhhhH--
Confidence 99999999999994 789999988888877 44799999999999999999999854 4556666666665543
Q ss_pred HHHHHHHHHHH
Q 002314 548 AQEWAETFVSE 558 (937)
Q Consensus 548 ~~~W~~~fl~~ 558 (937)
..+++++++.
T Consensus 347 -~~~~~~~~~~ 356 (359)
T cd03823 347 -EDQAEEYLKL 356 (359)
T ss_pred -HHHHHHHHHH
Confidence 5555555443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-18 Score=191.31 Aligned_cols=213 Identities=13% Similarity=0.110 Sum_probs=152.8
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEE
Q 002314 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 366 (937)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iI 366 (937)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+... ...++.++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 488888888765555432 1111 1246889999999998864311 01234456
Q ss_pred EEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 002314 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (937)
Q Consensus 367 L~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~ 446 (937)
++++|+.+.||++.+|+|++.+.+++|++ .|+++|. +.. +. + +. .++ + +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG~-----~~~--~~--~---l~-~~~------~------~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKSS-----NML--DP--R---LF-GLN------G------VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEeC-----ccc--ch--h---hc-ccc------c------eec
Confidence 67778999999999999999998887764 4776762 111 11 1 10 011 1 135
Q ss_pred CCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEE---------------
Q 002314 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV--------------- 509 (937)
Q Consensus 447 ~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllV--------------- 509 (937)
.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6889999999999999999999999999999999994 799999988878877 5566665
Q ss_pred -----CCCCHHHHHHHHHHHHcCC-HHHHHHHHH-hhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 510 -----NPWNITEVANAIARALNMS-PEEREKRHW-HNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 510 -----nP~D~~~lA~aI~~aL~m~-~~er~~r~~-~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
+| |.++++++|.++|.++ ++++++++. ......+++++...++++++.+++
T Consensus 273 ~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 273 VGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 44 7889999999999874 234444444 445567999999999999887753
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=188.63 Aligned_cols=192 Identities=16% Similarity=0.233 Sum_probs=123.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..++ .++|+.|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 489999999999976 34689999999999986 699999999999999998888774 4789999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCce--eeeecceE-----------------EEEeec---cC
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH--FEQRETSL-----------------VWNYKY---AD 726 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~--iE~K~~sl-----------------~~hyr~---ad 726 (937)
|+.+...++.. +.....+. +.+.++++...+ .++.. +....... .+.... ..
T Consensus 67 Ga~i~~~~~~~--i~~~~l~~---~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLDR---DIASDLFGVVHD-NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLE 140 (266)
T ss_pred CcEEECCCCCE--ehhhcCCH---HHHHHHHHhhcc-cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcc
Confidence 99998533321 11112332 333444433211 11110 11000000 000000 00
Q ss_pred h-hh--------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEE
Q 002314 727 V-EF--------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 796 (937)
Q Consensus 727 ~-e~--------~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~i 796 (937)
. .. ......++.+.+ ...+. ..+.+. .+..++||.|+++|||.||++|+++++ ++.+++++|
T Consensus 141 ~~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viaf 212 (266)
T PRK10976 141 PDGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAF 212 (266)
T ss_pred cCCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEE
Confidence 0 00 000112222333 21111 234543 456799999999999999999999999 678999999
Q ss_pred ecCCCCcHHHHHhcCc
Q 002314 797 GHFLGKDEDVYAFFEP 812 (937)
Q Consensus 797 GD~d~nDEdMf~~~~~ 812 (937)
|| +.||.+||+.++.
T Consensus 213 GD-~~NDi~Ml~~ag~ 227 (266)
T PRK10976 213 GD-GMNDAEMLSMAGK 227 (266)
T ss_pred cC-CcccHHHHHHcCC
Confidence 99 9999999999976
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-17 Score=184.30 Aligned_cols=273 Identities=20% Similarity=0.131 Sum_probs=191.1
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCc--cchHH-HHhhhcCCEEEEeCHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDL-LRAVLAADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp--~r~ei-l~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
..|+|++|..+..++..++++.....++.+++|...+... ..... ....+ ...+-.+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 4599999988777777777665566778888886532111 00000 00111 112335789988888777665541
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ 387 (937)
+. ......+.+.|+|+|.+.+...... ...++..|+++||+.+.||+..+++|+..
T Consensus 157 ---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 ---GI---------IKKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred ---cC---------CCcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 00 0013467788999999877543110 12467899999999999999999999999
Q ss_pred hHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002314 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (937)
Q Consensus 388 ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~S 467 (937)
+.+++|++ .|+++|..... ++ .... ++...+. . ..|.+ .|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~~----~l~i~G~~~~~---~~--~~~~---~~~~~~~----~--~~v~~-~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPNV----RLLLVGDGDEE---NP--AAIL---EIEKLGL----E--GRVEF-LGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCCe----EEEEEcCCCcc---hh--hHHH---HHHhcCC----c--ceEEE-eec--cccHHHHHHhccEEEecC
Confidence 98877764 47777643311 11 1111 1222211 1 23555 454 678999999999999999
Q ss_pred CCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh-hh
Q 002314 468 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 544 (937)
Q Consensus 468 l~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-V~ 544 (937)
..||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++..+++++ ..
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999994 789999999988887 56799999999999999999988765 4566667777777 58
Q ss_pred cCCHHHHHHHHH
Q 002314 545 THTAQEWAETFV 556 (937)
Q Consensus 545 ~~~~~~W~~~fl 556 (937)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 899999988775
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=184.57 Aligned_cols=242 Identities=19% Similarity=0.146 Sum_probs=166.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+||+|+....++ + .+..+.|+.+++|..+.... ..........+.+.+-+......+..
T Consensus 87 ~~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~--------~~~~~~~~~~~~~~~~s~~~~~~~~~------ 148 (335)
T cd03802 87 DFDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPEL--------LKLYYAARPDVPFVSISDAQRRPWPP------ 148 (335)
T ss_pred CCCEEEecCcccchh---h-hcccCCCEEEEecCCCCccc--------chHHHhhCcCCeEEEecHHHHhhccc------
Confidence 469999999887766 2 23457889999998754211 11333444555555444432221110
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+.+
T Consensus 149 -------------~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--- 195 (335)
T cd03802 149 -------------L-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR--- 195 (335)
T ss_pred -------------c-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh---
Confidence 1 567899999999888641 1246789999999999999999999754
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-~ 469 (937)
++ +.|+++|... ..+ .+...+.+... ++ ..|+| .|.++.+++..+|+.||++|+||. .
T Consensus 196 --~~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~~-~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 196 --AG----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIEY-LGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred --cC----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEEE-eCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 23 4477776432 111 12222222110 11 13664 799999999999999999999997 5
Q ss_pred cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh-hhcC
Q 002314 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (937)
Q Consensus 470 EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-V~~~ 546 (937)
||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++.++.+. .++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~~-------~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRAA-------CRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHHH-------HHHHHHHhC
Confidence 99999999999994 799999999888877 447999987 999999999998754221 1222 3667
Q ss_pred CHHHHHHHHHH
Q 002314 547 TAQEWAETFVS 557 (937)
Q Consensus 547 ~~~~W~~~fl~ 557 (937)
++..-++++++
T Consensus 322 s~~~~~~~~~~ 332 (335)
T cd03802 322 SAARMVDDYLA 332 (335)
T ss_pred CHHHHHHHHHH
Confidence 87777777665
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-17 Score=186.60 Aligned_cols=266 Identities=23% Similarity=0.214 Sum_probs=179.5
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
...|+|++|+...+.....+.. ..+.+..+++|........+..+ ...-....+..+|.|.+.+..+.+.+.. .
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~ 155 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLL-PRKKPVVVHWHSDIVKQKLLLKL-YRPLQRRFLRRADAIVATSPNYAETSPV----L 155 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHh-ccCceEEEEEcChhhccchhhhh-hhHHHHHHHHhcCEEEeCcHHHHHHHHH----h
Confidence 4669999998654433222222 24678888899643211111000 0111222455788888877765554322 1
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll 389 (937)
.....++.++|+|+|.+.|..... . .........++++|+++||+.+.||+..+++|++++.
T Consensus 156 ------------~~~~~~~~~i~~gi~~~~~~~~~~---~---~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 217 (357)
T cd03795 156 ------------RRFRDKVRVIPLGLDPARYPRPDA---L---EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP 217 (357)
T ss_pred ------------cCCccceEEecCCCChhhcCCcch---h---hhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhcc
Confidence 111256889999999987764311 0 0011111246789999999999999999999998874
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl- 468 (937)
++.|+++|. ++.. .++.+++.+.+. . ..|+ +.|.++.+++..+|+.||++++||.
T Consensus 218 --------~~~l~i~G~-----g~~~----~~~~~~~~~~~~----~--~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~~ 273 (357)
T cd03795 218 --------DAPLVIVGE-----GPLE----AELEALAAALGL----L--DRVR-FLGRLDDEEKAALLAACDVFVFPSVE 273 (357)
T ss_pred --------CcEEEEEeC-----ChhH----HHHHHHHHhcCC----c--ceEE-EcCCCCHHHHHHHHHhCCEEEeCCcc
Confidence 355777763 2222 234444433221 1 2466 4799999999999999999999996
Q ss_pred -CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 469 -RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 469 -~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
.||||++++|||+|+ .|+|+|+..|..+.+ +.+|++++|.|+++++++|.++++++ +++.++.+++++++.
T Consensus 274 ~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~ 348 (357)
T cd03795 274 RSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERAE 348 (357)
T ss_pred cccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHH
Confidence 599999999999994 788888888887765 56899999999999999999999865 566777777787764
Q ss_pred -cCCH
Q 002314 545 -THTA 548 (937)
Q Consensus 545 -~~~~ 548 (937)
.+++
T Consensus 349 ~~~s~ 353 (357)
T cd03795 349 EEFTA 353 (357)
T ss_pred Hhcch
Confidence 3444
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=193.23 Aligned_cols=267 Identities=9% Similarity=-0.023 Sum_probs=175.4
Q ss_pred CCCCEEEEeCcccc--h-HHHHHHhhCCCCeEEEEEccCCCchhhhccCccc-------hHHHHhh-hcCCEEEEeCHHH
Q 002314 230 KDGDVVWCHDYHLM--F-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-------SDLLRAV-LAADLVGFHTYDY 298 (937)
Q Consensus 230 ~~~DvVwvHDyhl~--l-lp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r-------~eil~~l-l~aDlIgF~t~~~ 298 (937)
+..|+|++|....+ . ++.++++ ..+.|+++.+|--+++..-. ..+.. ..+-+.+ -.||.|...+...
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 35799999985532 2 2333333 34789999999754321100 01100 1111111 2478777776654
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHH---------------H--hc
Q 002314 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------T--FA 361 (937)
Q Consensus 299 ~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~---------------~--~~ 361 (937)
.+.+.+ +.....+|.++|+| +...|.+.... .....+.+ . -.
T Consensus 172 ~~~l~~----------------~~~~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 172 KEDLQQ----------------FNNWKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred HHHHHh----------------hhccCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCC
Confidence 333221 11234678899999 55667653211 11111111 0 02
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHhHHh------CcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEE------NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~Af~~ll~~------~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~ 435 (937)
+..+++++||+.+.||+..+|+|+..+.+. +|+ +.|+++|. ++. ++++++++.+.+
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG~-----G~~----~~~l~~~~~~~~----- 292 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITGK-----GPL----KEKYLERIKELK----- 292 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEec-----Ccc----HHHHHHHHHHcC-----
Confidence 345788999999999999999999998763 344 55887763 332 234555554433
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECC---CCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEEC
Q 002314 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN 510 (937)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~S---l~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVn 510 (937)
...++++.+.++.+++..+|+.||++|+++ ..+||+++++|||||+ .|+|+|...|..+.+ |.+|++|+
T Consensus 293 --l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~ 366 (415)
T cd03816 293 --LKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG 366 (415)
T ss_pred --CCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC
Confidence 125777788899999999999999999743 3588999999999994 789999988888877 66899994
Q ss_pred CCCHHHHHHHHHHHHcCC--HHHHHHHHHhhhhhhhc
Q 002314 511 PWNITEVANAIARALNMS--PEEREKRHWHNFTHVTT 545 (937)
Q Consensus 511 P~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~V~~ 545 (937)
|++++|++|.++++++ ++++.++.+++++..+.
T Consensus 367 --d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 367 --DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred --CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 9999999999999982 56777777777777643
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-18 Score=180.07 Aligned_cols=181 Identities=18% Similarity=0.216 Sum_probs=118.7
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeCceE
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaenG~~ 671 (937)
|++|+||||++. +..++++++++|++|.+ .|+.|+++|||+...+..++..++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 689999999976 34588999999999986 699999999999999988877764 5799999999
Q ss_pred EEecCC---eeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC
Q 002314 672 LRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (937)
Q Consensus 672 ir~~~~---~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~ 748 (937)
+...++ .|... ....|................-.+.. ...+.......+++ .+.++...+ .
T Consensus 66 i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~-~----- 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAY----LEEEWFLDIVIAKTFPFSRLKVQYPR--RASLVKMRYGIDVD----TVREIIKEL-G----- 129 (225)
T ss_pred EEeCCCCceEEecc----cCHHHHHHHHHhcccchhhhcccccc--ccceEEEeecCCHH----HHHHHHHhc-C-----
Confidence 986432 24322 23334322111110000000000000 01111111111222 123333333 1
Q ss_pred CCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 749 ~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+.+..+...+||.|++++||.||++++++++ ++.+++++||| +.||++||+.++.
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 186 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDLFEVPGF 186 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHHHHhcCc
Confidence 123334556799999999999999999999998 56899999999 9999999999865
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=198.42 Aligned_cols=198 Identities=13% Similarity=0.180 Sum_probs=125.0
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
++.|+ .+.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++
T Consensus 301 ~~~~~-~~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 301 LRFYK-PKFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred hhhhc-cCccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCc
Confidence 34444 46899999999999976 35689999999999987 6999999999999999888876632
Q ss_pred -----------eEEeeCceEEEecCCe--eeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEE---------E
Q 002314 663 -----------WLAAENGMFLRCTTGK--WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV---------W 720 (937)
Q Consensus 663 -----------~liaenG~~ir~~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~---------~ 720 (937)
++|+.||+.+...++. +... .+. +.+.++++...+..-...+...+.... +
T Consensus 365 ~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~~---e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~ 437 (580)
T PLN02887 365 AGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LDQ---EVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSL 437 (580)
T ss_pred ccccceEeecccEEeecCeEEEECCCcEEEEEe----CCH---HHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHH
Confidence 3567799999852222 3332 232 334444433222100001111000000 0
Q ss_pred Ee--e--c---c-Ch-hh------------h--HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHH
Q 002314 721 NY--K--Y---A-DV-EF------------G--RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRI 776 (937)
Q Consensus 721 hy--r--~---a-d~-e~------------~--~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~L 776 (937)
++ . . . +. ++ . ......+...+ ...+. ..+.++ .+..++||.|+|+|||.||++|
T Consensus 438 ~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~L 515 (580)
T PLN02887 438 HTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKML 515 (580)
T ss_pred HHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHHH
Confidence 00 0 0 0 00 00 0 00011222222 22121 135544 4678999999999999999999
Q ss_pred HHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 777 LAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 777 l~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+++++ ++.+++++||| +.||.+||+.++.
T Consensus 516 ~e~lG------I~~eeviAFGD-s~NDIeMLe~AG~ 544 (580)
T PLN02887 516 LNHLG------VSPDEIMAIGD-GENDIEMLQLASL 544 (580)
T ss_pred HHHcC------CCHHHEEEEec-chhhHHHHHHCCC
Confidence 99999 67899999999 9999999999864
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=4e-17 Score=183.41 Aligned_cols=268 Identities=16% Similarity=0.050 Sum_probs=178.5
Q ss_pred CCCEEEEeCcccc--hHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHH-----HhhhcCCEEEEeCHHHHHHHH
Q 002314 231 DGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 231 ~~DvVwvHDyhl~--llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil-----~~ll~aDlIgF~t~~~~~~Fl 303 (937)
..|+++||..... .+..+++. .+.++.+.+|..-.....+.. + ...++ ..+..+|.|.+.+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3466666654433 33333433 378888888863111111110 0 11111 134467888887765444432
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCcEEEEEecccccCCHHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIL~VdRld~~KGi~~~ 381 (937)
. .. |... .++|+|+|...+.+. ...++.+ .+++.|+++||+.+.||+..+
T Consensus 160 ~----~~------------~~~~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 E----KY------------GRDS--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred H----hc------------CCCC--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 11 1111 789999998766430 0112222 355678999999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|+.++.. ++.|+++|.... .. .+.+++.+. ++.. ..|+ +.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~~--~~---~~~~~~~~~-------~~~~--~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNADH--NT---PYGKLLKEK-------AAAD--PRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCCC--cc---hHHHHHHHH-------hCCC--CcEE-EccccChHHHHHHHHhCC
Confidence 999987632 355887875321 11 233333321 1111 2365 479999999999999999
Q ss_pred EEEECCCC-cCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 462 VALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 462 v~vv~Sl~-EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
++++||.. ||||++++|||||+ .|+|+|..+|..+.++.+|.+++|.|. +|++|.++++++ +.+.++.++.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 99999999999994 799999988888877678999998776 999999999976 45566667777
Q ss_pred hhhh-cCCHHHHHHHHHHHH
Q 002314 541 THVT-THTAQEWAETFVSEL 559 (937)
Q Consensus 541 ~~V~-~~~~~~W~~~fl~~l 559 (937)
+.+. .++|..-++++++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 589999888887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=176.54 Aligned_cols=184 Identities=17% Similarity=0.304 Sum_probs=124.0
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeCceE
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaenG~~ 671 (937)
||+|+||||++. ...++++++++|++|.+ .|+.++|+|||++..+.+++..++ .++|+.||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 789999999986 24589999999999997 599999999999999999999884 5999999999
Q ss_pred EEecCCeeeeccccccChhHHHHHHHHHHHHHhcC-------C-Cceeeee-----------c-----------------
Q 002314 672 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT-------P-RSHFEQR-----------E----------------- 715 (937)
Q Consensus 672 ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~-------~-Gs~iE~K-----------~----------------- 715 (937)
+....++.. .....+. +.+..+++...... + +.++... .
T Consensus 66 i~~~~~~~l--~~~~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKIL--YEKPIDS---DDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEEE--EEESB-H---HHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeecccccc--hhhheec---cchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 943333321 1112333 33444444433221 1 1111111 0
Q ss_pred -ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEE
Q 002314 716 -TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (937)
Q Consensus 716 -~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl 794 (937)
..+.++ .+++ ....+...+ ...+...-..+..+..++||.|+++|||.|+++|+++++ ++.+.++
T Consensus 141 i~ki~~~---~~~~----~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFF---PDPE----DLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEE---SCHH----HHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeecc---ccch----hhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 011111 0111 222333333 221221113345678999999999999999999999998 5789999
Q ss_pred EEecCCCCcHHHHHhcCc
Q 002314 795 CIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 795 ~iGD~d~nDEdMf~~~~~ 812 (937)
+||| +.||++||+.++.
T Consensus 207 ~~GD-~~ND~~Ml~~~~~ 223 (254)
T PF08282_consen 207 AFGD-SENDIEMLELAGY 223 (254)
T ss_dssp EEES-SGGGHHHHHHSSE
T ss_pred Eeec-ccccHhHHhhcCe
Confidence 9999 9999999999976
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-17 Score=185.24 Aligned_cols=248 Identities=20% Similarity=0.173 Sum_probs=168.0
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCC----ch-hhhccCcc-------------chHHHHhhhcCCEE
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPS-------------RSDLLRAVLAADLV 291 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfP----s~-e~fr~lp~-------------r~eil~~ll~aDlI 291 (937)
.+.|+|+++...... ..+ ..+..+..+++|.|.+ .. .+....+. +....+.+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~~--~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVAK--GVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHhc--ccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 367999876532221 112 3457788888898621 11 11111110 00112234577888
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEec
Q 002314 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371 (937)
Q Consensus 292 gF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdR 371 (937)
...+....+.+.. .. + .+..++|+|+|.+.|.+.. ..+++++++||
T Consensus 158 i~~S~~~~~~~~~----~~------------~--~~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YY------------G--RDATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----Hh------------C--CCcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 8777765555532 11 1 1235789999998875421 23567999999
Q ss_pred ccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHH
Q 002314 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451 (937)
Q Consensus 372 ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~ 451 (937)
+.+.||++.+++|++++ | + .|+++|. +++...+ ++ ... ..|.| .|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-~----~l~ivG~-----g~~~~~l----~~---~~~--------~~V~~-~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-K----RLVVIGD-----GPELDRL----RA---KAG--------PNVTF-LGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-C----cEEEEEC-----ChhHHHH----Hh---hcC--------CCEEE-ecCCCHH
Confidence 99999999999999875 3 3 3676763 3332222 22 111 24665 7899999
Q ss_pred HHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCH
Q 002314 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (937)
Q Consensus 452 el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (937)
++..+|+.||++|+||. ||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999994 799999998888877 568999999999999999999998874
Q ss_pred HHHHHHHHhhhhhhhcCCHHHHHHH
Q 002314 530 EEREKRHWHNFTHVTTHTAQEWAET 554 (937)
Q Consensus 530 ~er~~r~~~~~~~V~~~~~~~W~~~ 554 (937)
. ..+.+++.+..+++.+..++
T Consensus 329 ~----~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 F----DPQAIRAHAERFSESRFREK 349 (351)
T ss_pred c----CHHHHHHHHHhcCHHHHHHH
Confidence 1 22333445556676666554
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=180.71 Aligned_cols=189 Identities=15% Similarity=0.190 Sum_probs=121.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.||||+|+||||++. +..++++++++|++|.+ +|+.|+|+|||+...+...+..++ .++|+.|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 67 (272)
T PRK10530 3 YRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCN 67 (272)
T ss_pred ccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcC
Confidence 689999999999976 34588999999999987 699999999999999999888874 4699999
Q ss_pred ceEEEec-CCe--eeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecc------------------eEEE----Eee
Q 002314 669 GMFLRCT-TGK--WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET------------------SLVW----NYK 723 (937)
Q Consensus 669 G~~ir~~-~~~--w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~------------------sl~~----hyr 723 (937)
|+.+... ++. +... .+. +.+.++++......-...+..... .+.. .+.
T Consensus 68 Ga~i~d~~~~~~l~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (272)
T PRK10530 68 GTYLYDYQAKKVLEADP----LPV---QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFT 140 (272)
T ss_pred CcEEEecCCCEEEEecC----CCH---HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceE
Confidence 9999852 232 2222 232 334444443322110111100000 0000 000
Q ss_pred ccCh--hh----h-----------HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhccccc
Q 002314 724 YADV--EF----G-----------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKK 785 (937)
Q Consensus 724 ~ad~--e~----~-----------~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~ 785 (937)
..+. +. . .....++.+.+ ....++.+. .+..++||.|.+++||.|+++++++++
T Consensus 141 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g---- 212 (272)
T PRK10530 141 QVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV----EHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG---- 212 (272)
T ss_pred EcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH----hhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC----
Confidence 0000 00 0 00011222222 112233332 345689999999999999999999998
Q ss_pred CCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 786 MKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 786 ~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
++.+++++||| +.||.+||+.++.
T Consensus 213 --i~~~e~i~~GD-~~NDi~m~~~ag~ 236 (272)
T PRK10530 213 --WSMKNVVAFGD-NFNDISMLEAAGL 236 (272)
T ss_pred --CCHHHeEEeCC-ChhhHHHHHhcCc
Confidence 57899999999 9999999999864
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-17 Score=178.25 Aligned_cols=198 Identities=18% Similarity=0.212 Sum_probs=123.7
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc---C-ceE
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---N-LWL 664 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~-l~l 664 (937)
.+.|||++|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 46799999999999976 35689999999999987 69999999999999998888743 2 367
Q ss_pred EeeCceEEEecCCe-eeeccccccChhHHHHHHHHHHHHH-----hcCCCceeeeecceEEEEee-ccC-h----hhh--
Q 002314 665 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNYK-YAD-V----EFG-- 730 (937)
Q Consensus 665 iaenG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~-----~~~~Gs~iE~K~~sl~~hyr-~ad-~----e~~-- 730 (937)
|+.||+.+...++. +...++...+.++...+.+.++.+. ....+.+++.......+.+. ... . ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 99999999864332 2222211133344444444443321 11123333322111111110 000 0 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecC---CCCc
Q 002314 731 ---RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKD 803 (937)
Q Consensus 731 ---~~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d~nD 803 (937)
.....++.+.+ ...+....+.... |..++||.|+|+|||.||+.|+++ .++|++|||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 00112344444 3323322333343 357999999999999999999987 3689999992 3799
Q ss_pred HHHHHhcCc
Q 002314 804 EDVYAFFEP 812 (937)
Q Consensus 804 EdMf~~~~~ 812 (937)
++||+.++.
T Consensus 217 ieMl~~~~~ 225 (247)
T PTZ00174 217 YEIYNDPRT 225 (247)
T ss_pred HhhhhcCCC
Confidence 999997644
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.1e-18 Score=181.42 Aligned_cols=191 Identities=17% Similarity=0.251 Sum_probs=129.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC----ceEEe
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAA 666 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l~lia 666 (937)
+.+|++|+||||++..+ .+..+++++.++|+++.+ .|+.++++|||+...+.++...++ -.+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 46899999999998421 134578999999999986 688999999999999998865442 34899
Q ss_pred eCceEEEecCC-----eeeeccccccChhHH-HHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHH
Q 002314 667 ENGMFLRCTTG-----KWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (937)
Q Consensus 667 enG~~ir~~~~-----~w~~~~~~~~~~~w~-~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~ 740 (937)
+||+.|..++. .|... ....|. +.+..+...+...++....+.+...+.+.+...+ ......++...
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~---~~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEY----LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEA---APEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHH----HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhh---hhHHHHHHHHH
Confidence 99999986431 12111 112232 2344444444343444444555667776654221 11112233333
Q ss_pred HhcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 741 LWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 741 L~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
+ ... ...+.+ ..+..++||+|++++||.|+++|++.++ ++.+.+++||| +.||++||+.+
T Consensus 142 l-~~~--~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~ml~~~ 202 (249)
T TIGR01485 142 L-KET--GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIELFEIG 202 (249)
T ss_pred H-Hhc--CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHHHHcc
Confidence 3 221 123443 5678899999999999999999999998 57899999999 99999999984
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-16 Score=180.09 Aligned_cols=197 Identities=21% Similarity=0.289 Sum_probs=147.1
Q ss_pred eeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccc--cCCHHHHHHHHHHhHHh-CcCccCc
Q 002314 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGK 398 (937)
Q Consensus 325 ~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~--~KGi~~~l~Af~~ll~~-~P~~~~~ 398 (937)
..++.++|+|||.+.|.+.. ....++.+ .++.+++++++... .||+..+++|++.+.++ .|+
T Consensus 158 ~~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~---- 225 (365)
T cd03825 158 GIPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD---- 225 (365)
T ss_pred CCceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----
Confidence 35788999999998875421 11223333 34566666666654 89999999999988665 343
Q ss_pred EEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCC-HHHHHHHHHHccEEEECCCCcCCChhHH
Q 002314 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSY 477 (937)
Q Consensus 399 v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vv~Sl~EG~nLv~~ 477 (937)
+.|+++|... .. .. . .++ ..|. +.|.++ .+++..+|+.||++++||..||||++++
T Consensus 226 ~~~~i~G~~~-----~~----~~--~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~ 282 (365)
T cd03825 226 IELVVFGASD-----PE----IP--P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAI 282 (365)
T ss_pred eEEEEeCCCc-----hh----hh--c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHH
Confidence 5577665321 10 00 0 111 1355 467887 8899999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHH
Q 002314 478 EFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAET 554 (937)
Q Consensus 478 EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~ 554 (937)
|||+|+ .|+|+|..+|..+.+ +.+|+++++.|.+++|++|.++++.+ +++.++.+++++++ ..++++..+++
T Consensus 283 Eam~~g----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~ 357 (365)
T cd03825 283 EALACG----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKR 357 (365)
T ss_pred HHHhcC----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999994 789999988888877 34799999999999999999999865 45666677777776 56899999999
Q ss_pred HHHHHHH
Q 002314 555 FVSELND 561 (937)
Q Consensus 555 fl~~l~~ 561 (937)
+++-+++
T Consensus 358 ~~~~y~~ 364 (365)
T cd03825 358 YLSLYEE 364 (365)
T ss_pred HHHHHhh
Confidence 8876653
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-16 Score=172.73 Aligned_cols=190 Identities=17% Similarity=0.231 Sum_probs=117.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc-C---ceEEe
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-N---LWLAA 666 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~---l~lia 666 (937)
++++|+|+||||++. +..++++++++|++|.+ . +.|+++|||+...+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 446669999999976 34588999999999985 4 999999999999998888774 1 47899
Q ss_pred eCceEEEecCCeeeec--cccccChhHHHHHHHHHHHHHhc-----CCCceeeeecceEEEEe--eccChh----hh---
Q 002314 667 ENGMFLRCTTGKWMTT--MPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRETSLVWNY--KYADVE----FG--- 730 (937)
Q Consensus 667 enG~~ir~~~~~w~~~--~~~~~~~~w~~~v~~il~~~~~~-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~--- 730 (937)
+||+++...+ .+... ++...+.+....+.+.++.+... ..+.+++.....+.+.+ ...... +.
T Consensus 71 ~NGa~i~~~g-~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 71 ENGLVAHKDG-KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYD 149 (245)
T ss_pred CCceEEEeCC-EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhC
Confidence 9999998533 33221 11122323333333333332111 12344443322222221 111100 00
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecC---CCCcH
Q 002314 731 --RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKDE 804 (937)
Q Consensus 731 --~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d~nDE 804 (937)
.....++...+ ...+.+..+.+. .|..++||+++|+|||.||+.|+ . ++++++|||. +.||.
T Consensus 150 ~i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ND~ 217 (245)
T PLN02423 150 KVHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGGNDH 217 (245)
T ss_pred ccchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCCCcH
Confidence 01112333444 222332234333 35689999999999999999998 2 6899999993 49999
Q ss_pred HHHHh
Q 002314 805 DVYAF 809 (937)
Q Consensus 805 dMf~~ 809 (937)
+|++.
T Consensus 218 eMl~~ 222 (245)
T PLN02423 218 EIFES 222 (245)
T ss_pred HHHhC
Confidence 99975
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=175.55 Aligned_cols=246 Identities=18% Similarity=0.123 Sum_probs=166.7
Q ss_pred CCCEEEEeCc-ccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDy-hl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
..|+|++|++ ...++..+.+. . +.++.+.+|..++.... ...+........+..+|.+.+.+....+.+....
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 154 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-L-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL--- 154 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-c-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHhh---
Confidence 4699999998 44444444433 3 78999999987653221 1111111234445578888888776655544311
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll 389 (937)
+ ....++.++|+|+|.+.+...... .. . .....++.+|+++||+.+.||+..+++|+..+.
T Consensus 155 -~-----------~~~~~~~vi~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 155 -G-----------IPPDKIEVIYNPIDIEEIRALAEE-----PL-E-LGIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred -c-----------CCccccEEecCCcChhhcCcccch-----hh-h-cCCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 1 114678899999999877643211 00 0 011246788999999999999999999999998
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (937)
++++++ .|+++|.. +.. .++.+++.+.+.. ..|.+ .+.+ +++..+|+.||++++||..
T Consensus 216 ~~~~~~----~l~i~G~~-----~~~----~~~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPDA----RLVILGDG-----PLR----EELEALAKELGLA------DRVHF-LGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCCc----eEEEEcCC-----ccH----HHHHHHHHhcCCC------ccEEE-eccc--CCHHHHHHhCCEEEeCccc
Confidence 876664 47777632 222 2233444443321 13554 5654 4688999999999999999
Q ss_pred cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH---HHHHHHHcC
Q 002314 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA---NAIARALNM 527 (937)
Q Consensus 470 EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA---~aI~~aL~m 527 (937)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|.++++ ++|..++..
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 99999999999994 789999999888877 5679999999999994 555555543
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-17 Score=176.13 Aligned_cols=184 Identities=15% Similarity=0.162 Sum_probs=124.2
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc----eEEeeC
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WLAAEN 668 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~liaen 668 (937)
||++|+||||++. +..+++.. ++|+ +. ++|+.++|+|||++..+.+++..+++ .+|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 6899999999974 23355544 7776 44 46999999999999999999988743 499999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHH-----HHHHHHHHhcCCCceeeeecc--eEEEEeeccChhhhHHHHHHHHHHH
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSL-----KHVFEYFTERTPRSHFEQRET--SLVWNYKYADVEFGRIQARDMLQHL 741 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v-----~~il~~~~~~~~Gs~iE~K~~--sl~~hyr~ad~e~~~~~a~el~~~L 741 (937)
|+.+..... +. .+..|...+ ...+..+....+|..++.+.. ...++|+..+.... ...++.+.+
T Consensus 64 Ga~i~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPE-LQ------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGEP--ILPQIRQRL 134 (236)
T ss_pred CceEEeCCC-CC------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccch--HHHHHHHHH
Confidence 999864221 10 011121111 111234445577777776652 45677775322111 123334444
Q ss_pred hcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 742 WTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 742 ~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.... ..+.+ ..+..++|+.|+++|||.|++.|+++++ ++++.+++||| +.||++||+.+..
T Consensus 135 -~~~~--~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~ml~~~~~ 196 (236)
T TIGR02471 135 -RQQS--QAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEMLRGLTL 196 (236)
T ss_pred -Hhcc--CCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHHHcCCCc
Confidence 3221 23443 4566789999999999999999999998 56789999999 9999999998754
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.2e-17 Score=176.76 Aligned_cols=189 Identities=16% Similarity=0.294 Sum_probs=123.0
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeCce
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaenG~ 670 (937)
|||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+...+..++ .++|+.||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999986 24688999999999987 599999999999999999988874 479999999
Q ss_pred EEEecCCe--eeeccccccChhHHHHHHHHHHHHHhcC--------CCceeeeecce-EEEE----eec----cChh---
Q 002314 671 FLRCTTGK--WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-LVWN----YKY----ADVE--- 728 (937)
Q Consensus 671 ~ir~~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~~~--------~Gs~iE~K~~s-l~~h----yr~----ad~e--- 728 (937)
.+...++. +... .+. +.+.++++.+.... .+.++...... +..+ +.. .+.+
T Consensus 66 ~i~~~~~~~i~~~~----i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T TIGR00099 66 AVIDDQGEILYKKP----LDL---DLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLP 138 (256)
T ss_pred EEECCCCCEEeecC----CCH---HHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhh
Confidence 99864322 2222 333 33344444332211 11111110000 0000 000 0000
Q ss_pred ---h-------hHHHHHHHHHHHhcC-CCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEE
Q 002314 729 ---F-------GRIQARDMLQHLWTG-PISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 796 (937)
Q Consensus 729 ---~-------~~~~a~el~~~L~~~-~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~i 796 (937)
. ......++...+ .. .. ...+.+ ..+..++||.|+++|||.||+.+++.++ ++.+++++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~ 210 (256)
T TIGR00099 139 DDILKILLLFLDPEDLDLLIEAL-NKLEL-EENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAF 210 (256)
T ss_pred cccceEEEEECCHHHHHHHHHHh-hhhhh-cCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEe
Confidence 0 001122333333 21 11 123554 4567899999999999999999999998 578999999
Q ss_pred ecCCCCcHHHHHhcCc
Q 002314 797 GHFLGKDEDVYAFFEP 812 (937)
Q Consensus 797 GD~d~nDEdMf~~~~~ 812 (937)
|| +.||.+||+.++.
T Consensus 211 GD-~~nD~~m~~~~~~ 225 (256)
T TIGR00099 211 GD-GMNDIEMLEAAGY 225 (256)
T ss_pred CC-cHHhHHHHHhCCc
Confidence 99 9999999999975
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.2e-16 Score=178.14 Aligned_cols=242 Identities=12% Similarity=-0.011 Sum_probs=158.2
Q ss_pred CCCCEEEEeCcccch--HHHHHHhhCCCCeEEEEEccCCCchhhhccC--c----cchHHHHhh-hcCCEEEEeCHHHHH
Q 002314 230 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL--P----SRSDLLRAV-LAADLVGFHTYDYAR 300 (937)
Q Consensus 230 ~~~DvVwvHDyhl~l--lp~~Lr~~~~~~~I~~flH~PfPs~e~fr~l--p----~r~eil~~l-l~aDlIgF~t~~~~~ 300 (937)
..+|+|++|..+.+. ++..+-.+..+.|+.+++|..+.+.-..... + ....+.+.+ -.+|.|...+....+
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~ 178 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQH 178 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 356999999877532 2333323334688988899754211000000 0 001112222 247888887776555
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHH
Q 002314 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 301 ~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~ 380 (937)
...+ . .|. ++.++|+|+ .+.|.+.... ..++ .....+++++||+.+.||+..
T Consensus 179 ~l~~----~------------~g~--~i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~~~~ 230 (371)
T PLN02275 179 ELDQ----N------------WGI--RATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDEDFGI 230 (371)
T ss_pred HHHH----h------------cCC--CeEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCCHHH
Confidence 4322 1 111 167889984 5677543110 0111 123457889999999999999
Q ss_pred HHHHHHHhHH-----------------hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 002314 381 KLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (937)
Q Consensus 381 ~l~Af~~ll~-----------------~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (937)
+++|+..+.. .+|+ +.|+++| ++++.. ++++++.+.+. ..+++
T Consensus 231 li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~----~l~~~~~~~~l-------~~v~~ 290 (371)
T PLN02275 231 LLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKA----MYEEKISRLNL-------RHVAF 290 (371)
T ss_pred HHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHH----HHHHHHHHcCC-------CceEE
Confidence 9999988742 2454 5588886 344433 44445444331 24777
Q ss_pred eCCCCCHHHHHHHHHHccEEEECC---CCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~S---l~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA 518 (937)
+.+.++.+++..+|+.||+||+|+ ..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+ |++++|
T Consensus 291 ~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la 364 (371)
T PLN02275 291 RTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSELA 364 (371)
T ss_pred EcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHHHH
Confidence 777899999999999999999863 2489999999999994 789999988888877 67899996 699999
Q ss_pred HHHHHHH
Q 002314 519 NAIARAL 525 (937)
Q Consensus 519 ~aI~~aL 525 (937)
++|.++|
T Consensus 365 ~~i~~l~ 371 (371)
T PLN02275 365 DQLLELL 371 (371)
T ss_pred HHHHHhC
Confidence 9998875
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.9e-17 Score=170.54 Aligned_cols=182 Identities=15% Similarity=0.204 Sum_probs=119.5
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|+||+|+||||++. +..+++++.++|++|++ +|+.|+|+|||+...+..++..++ .++|++|
T Consensus 1 ik~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~N 65 (215)
T TIGR01487 1 IKLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAEN 65 (215)
T ss_pred CcEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEcc
Confidence 379999999999975 34689999999999987 699999999999999999888774 4799999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~ 748 (937)
|+.+...++. ....+ ....|........ .+....-...+ ....+.+... ... ...+...+ ..
T Consensus 66 Ga~i~~~~~~-~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~--~~~-----~~~~~~~l-~~---- 127 (215)
T TIGR01487 66 GGVIFYNKED-IFLAN--MEEEWFLDEEKKK-RFPRDRLSNEY--PRASLVIMRE--GKD-----VDEVREII-KE---- 127 (215)
T ss_pred CcEEEeCCCc-EEEec--ccchhhHHHhhhh-hhhhhhccccc--ceeEEEEecC--Ccc-----HHHHHHHH-Hh----
Confidence 9999864332 11110 1111211000000 00000000000 0111111111 111 11222233 21
Q ss_pred CCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 749 ~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.++.+..+...+||.|.+++||.|+++++++++ ++.+.+++||| +.||++||+.++.
T Consensus 128 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~ml~~ag~ 184 (215)
T TIGR01487 128 RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDLFRVVGF 184 (215)
T ss_pred CCeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHhCCC
Confidence 245655566789999999999999999999998 46788999999 9999999999976
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.2e-17 Score=170.56 Aligned_cols=184 Identities=15% Similarity=0.124 Sum_probs=119.2
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC---ceEEeeCc
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAENG 669 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~---l~liaenG 669 (937)
+|++|+||||++.. ..+++.++++|++|.+ .|+.|+|+|||+...+..++..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~~--------------~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCCC--------------CCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 58999999999762 2244559999999976 699999999999999999998874 46999999
Q ss_pred eEEEecCCeeee-----ccccccChhHHHHHHHHHHHHHhcCCC-ceee-----------------------eecceEEE
Q 002314 670 MFLRCTTGKWMT-----TMPEHLNMEWVDSLKHVFEYFTERTPR-SHFE-----------------------QRETSLVW 720 (937)
Q Consensus 670 ~~ir~~~~~w~~-----~~~~~~~~~w~~~v~~il~~~~~~~~G-s~iE-----------------------~K~~sl~~ 720 (937)
+.+.... .|+. ......+ | +.+.++++.......- .... .......+
T Consensus 66 a~i~~~~-~~~~~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (221)
T TIGR02463 66 AAIHLEE-LWREEPGYPRIILGIS--Y-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPL 141 (221)
T ss_pred cEEEcCc-ccccCCCceEEecCCC--H-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccE
Confidence 9998521 1110 0001122 2 2344444432211000 0000 00111111
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCC
Q 002314 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (937)
Q Consensus 721 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 800 (937)
... .+++ ...++.+.+ .. .++.+..+..++||.|.+++||.|+++++++++ ++.+++++||| +
T Consensus 142 ~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~ 204 (221)
T TIGR02463 142 LWR-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-G 204 (221)
T ss_pred Eec-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-C
Confidence 110 1111 112222223 21 245666677889999999999999999999998 57899999999 9
Q ss_pred CCcHHHHHhcCc
Q 002314 801 GKDEDVYAFFEP 812 (937)
Q Consensus 801 ~nDEdMf~~~~~ 812 (937)
.||++||++++.
T Consensus 205 ~NDi~ml~~ag~ 216 (221)
T TIGR02463 205 PNDLPLLEVADY 216 (221)
T ss_pred HHHHHHHHhCCc
Confidence 999999999875
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-15 Score=175.60 Aligned_cols=319 Identities=21% Similarity=0.194 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCcccchHHHHHHhh---CCCCeEEEEEccC-----CC-chhhhccCcc
Q 002314 210 QFAAYIKANQMFADVVNKHYK---DGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPS 277 (937)
Q Consensus 210 ~w~~Y~~vN~~fA~~i~~~~~---~~DvVwvHDyhl~llp~~Lr~~---~~~~~I~~flH~P-----fP-s~e~fr~lp~ 277 (937)
.+..+..+.++-++-+ +.+. .+||||+||||+-|+|.++++. ...++.+|++|.- |+ .....-.||.
T Consensus 107 ~~~Rf~~F~~a~~~~~-~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~ 185 (487)
T COG0297 107 NAERFAFFSLAAAELA-PLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF 185 (487)
T ss_pred HHHHHHHHHHHHHHHh-hhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH
Confidence 3445554444444433 2223 5799999999999999999996 7789999999953 33 1111223341
Q ss_pred -------------chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhh
Q 002314 278 -------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344 (937)
Q Consensus 278 -------------r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~ 344 (937)
-.-+--++..||.|..-++.|++.-.. ...|. .....+.+ +.-++.-|=||||.+...+..
T Consensus 186 ~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t---~~~g~-gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~ 259 (487)
T COG0297 186 EAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYT---PEYGE-GLEGLLSW--RSGKLSGILNGIDYDLWNPET 259 (487)
T ss_pred HHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhcc---ccccc-cchhhhhh--ccccEEEEEeeEEecccCccc
Confidence 123345577888888888888775441 00000 00011111 225666777899987765532
Q ss_pred cC-------Cc----hHHHHHHHHHHhc-----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCC
Q 002314 345 EI-------NP----VQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT 408 (937)
Q Consensus 345 ~~-------~~----~~~~~~~lr~~~~-----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~ 408 (937)
.. .+ -.+-...|++.++ +.+++..|+||+..||++.+++|+..|+++. ++ ||++|.+
T Consensus 260 d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g- 332 (487)
T COG0297 260 DPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG- 332 (487)
T ss_pred ccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-
Confidence 11 00 1112334555552 4589999999999999999999999999986 43 7777643
Q ss_pred CCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCc
Q 002314 409 RTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (937)
Q Consensus 409 r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g 488 (937)
.+ .+...+..++.++..++. +.-..+..--..+|..||++++||..|++||+-+++|.-+ +
T Consensus 333 ---d~---~le~~~~~la~~~~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----t 393 (487)
T COG0297 333 ---DP---ELEEALRALASRHPGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----T 393 (487)
T ss_pred ---cH---HHHHHHHHHHHhcCceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----C
Confidence 12 567788888887765322 2334456666789999999999999999999999999984 7
Q ss_pred eEEEeCCCCccccc-C---------CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh--hcCCHHHHHHHHH
Q 002314 489 VLILSEFAGAAQSL-G---------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV--TTHTAQEWAETFV 556 (937)
Q Consensus 489 ~lVlSe~aG~~~~l-g---------~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V--~~~~~~~W~~~fl 556 (937)
++|+.+.+|.++.+ . .+|+++.|.|.++++.+|.+|+..-..... .++...... ..++|+.-+.+++
T Consensus 394 vpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~ 472 (487)
T COG0297 394 LPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYV 472 (487)
T ss_pred cceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHH
Confidence 99999999999887 2 468999999999999999999975432111 022222222 4677888788777
Q ss_pred HHHHHh
Q 002314 557 SELNDT 562 (937)
Q Consensus 557 ~~l~~~ 562 (937)
+-.+..
T Consensus 473 ~lY~~~ 478 (487)
T COG0297 473 ELYKPL 478 (487)
T ss_pred HHHHHH
Confidence 655543
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=172.18 Aligned_cols=183 Identities=16% Similarity=0.140 Sum_probs=120.7
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeCce
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaenG~ 670 (937)
|||+|+||||++.. ..+.+.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~~--------------~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCC--------------CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 58999999999763 2123468999999987 599999999999999999998885 479999999
Q ss_pred EEEecCCeee-e---ccccccChhHHHHHHHHHHHHHhcCCCce-e-ee----------------------ecceEEEEe
Q 002314 671 FLRCTTGKWM-T---TMPEHLNMEWVDSLKHVFEYFTERTPRSH-F-EQ----------------------RETSLVWNY 722 (937)
Q Consensus 671 ~ir~~~~~w~-~---~~~~~~~~~w~~~v~~il~~~~~~~~Gs~-i-E~----------------------K~~sl~~hy 722 (937)
++...++... . ......+ .+.+.++++.+....+..+ + .. ......+.+
T Consensus 66 ~i~~~~~~~~~~~~~~~~~~i~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPVIALGIP---YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW 142 (256)
T ss_pred EEEeCCCcccCCCeEEEEcCCC---HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec
Confidence 9986432210 0 1101122 2455555554432211100 0 00 000000000
Q ss_pred eccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCC--CceEEEEecCC
Q 002314 723 KYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA--IDYVLCIGHFL 800 (937)
Q Consensus 723 r~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~--~d~vl~iGD~d 800 (937)
+++ ....+...+ . ...+.+..+..++||.|++++||.||++|+++++ ++ .+++++||| +
T Consensus 143 ---~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD-~ 203 (256)
T TIGR01486 143 ---SEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD-S 203 (256)
T ss_pred ---ChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC-C
Confidence 111 112222222 2 1245666666799999999999999999999998 56 899999999 9
Q ss_pred CCcHHHHHhcCc
Q 002314 801 GKDEDVYAFFEP 812 (937)
Q Consensus 801 ~nDEdMf~~~~~ 812 (937)
.||++||+.++.
T Consensus 204 ~ND~~Ml~~ag~ 215 (256)
T TIGR01486 204 PNDLPLLEVVDL 215 (256)
T ss_pred HhhHHHHHHCCE
Confidence 999999999976
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.8e-15 Score=173.19 Aligned_cols=286 Identities=15% Similarity=0.132 Sum_probs=175.9
Q ss_pred HHHHHhCCCCCEEEEeCcccchHHHHHHh-hCCCCeEEEEEccCCC-chhhhccCccchHHHHhhh-cCCEEEEeCHHHH
Q 002314 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRAVL-AADLVGFHTYDYA 299 (937)
Q Consensus 223 ~~i~~~~~~~DvVwvHDyhl~llp~~Lr~-~~~~~~I~~flH~PfP-s~e~fr~lp~r~eil~~ll-~aDlIgF~t~~~~ 299 (937)
.++++..+| |+|++|.+.++ |.++.. +..++|+.+..|.... +...++.+ ..+.+.++ .+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHH
Confidence 344555565 89998877765 444432 2346777766554322 11222211 22333333 4799999998887
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCH
Q 002314 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 378 (937)
Q Consensus 300 ~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi 378 (937)
+.|.+ +|.. .. +.++|++ +.+.+... ........+++.+ .++++|+++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 77654 2321 22 5566663 33322211 1112344566667 678889999875 6889
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhccc---CC--C--CcccEEEeCCCCCHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF---GT--L--TAVPIHHLDRSLDFP 451 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~---g~--~--~~~pV~~~~~~v~~~ 451 (937)
..+|+||.++.+++|+++ |+++| ++++. .+++++++.+.+-.+ .. . .-..|. +.+ +..
T Consensus 247 ~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~--~~~ 311 (425)
T PRK05749 247 ELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVL-LGD--TMG 311 (425)
T ss_pred HHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEE-EEe--cHH
Confidence 999999999988888764 66664 34432 123444444432211 00 0 001222 222 357
Q ss_pred HHHHHHHHccEEEE-CCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccc----ccCCceEEECCCCHHHHHHHHHHHHc
Q 002314 452 ALCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ----SLGAGAILVNPWNITEVANAIARALN 526 (937)
Q Consensus 452 el~aly~~ADv~vv-~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~----~lg~~gllVnP~D~~~lA~aI~~aL~ 526 (937)
++..+|+.||++++ +|+.||+|++++|||||+ .|+|++...|... .+..+|.++.|.|++++|++|.++++
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhc
Confidence 99999999999666 688899999999999994 6888776544332 22356888889999999999999998
Q ss_pred CCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHH
Q 002314 527 MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 527 m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 560 (937)
++ +.+.++.+++++++.++. .-++++++.+.
T Consensus 388 ~~-~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 388 DP-DARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred CH-HHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 54 567778888888886652 33344444443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=167.03 Aligned_cols=185 Identities=13% Similarity=0.112 Sum_probs=122.5
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEee
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liae 667 (937)
..|+||+|+||||++.. ..+++.++++|++|.+ .|+.++|+|||+...+...+..++ .++|+.
T Consensus 3 ~~kli~~DlDGTLl~~~--------------~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~ 67 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHH--------------TYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVE 67 (273)
T ss_pred cceEEEEcCcccCcCCC--------------CcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEE
Confidence 36899999999999752 3467789999999986 699999999999999999988875 379999
Q ss_pred CceEEEecCC--------------eeeeccccccChhHHHHHHHHHHHHHhcCCCce-eeee------------------
Q 002314 668 NGMFLRCTTG--------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH-FEQR------------------ 714 (937)
Q Consensus 668 nG~~ir~~~~--------------~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~-iE~K------------------ 714 (937)
||+.+...++ .|... ...+ .+.+.++++.+.......+ +...
T Consensus 68 nGa~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (273)
T PRK00192 68 NGAAIYIPKNYFPFQPDGERLKGDYWVIE--LGPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESAR 142 (273)
T ss_pred cCcEEEecccccccCCccccccCCceEEE--cCCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHH
Confidence 9999975322 22111 1122 2344444443322111000 0000
Q ss_pred -----cceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCC
Q 002314 715 -----ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (937)
Q Consensus 715 -----~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~ 789 (937)
.....+-+. .++ .....+...+ . ..++.+..++.++||.|.+ +||.|+++++++++ ++
T Consensus 143 ~~~~~~~~~~~~~~-~~~----~~~~~~~~~l-~----~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~ 205 (273)
T PRK00192 143 LAKDREFSEPFLWN-GSE----AAKERFEEAL-K----RLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQ 205 (273)
T ss_pred HHHhcccCCceeec-Cch----HHHHHHHHHH-H----HcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------cc
Confidence 000000000 000 0112222223 1 2246666777899999999 99999999999998 67
Q ss_pred C-ceEEEEecCCCCcHHHHHhcCc
Q 002314 790 I-DYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 790 ~-d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+ +++++||| +.||++||+.++.
T Consensus 206 ~~~~v~~~GD-s~NDi~m~~~ag~ 228 (273)
T PRK00192 206 DGVETIALGD-SPNDLPMLEAADI 228 (273)
T ss_pred CCceEEEEcC-ChhhHHHHHhCCe
Confidence 8 99999999 9999999999976
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-15 Score=154.63 Aligned_cols=156 Identities=28% Similarity=0.366 Sum_probs=119.1
Q ss_pred cCCcEEEEEecccccCCHHHHHHHHHHhHHh-CcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcc
Q 002314 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (937)
Q Consensus 361 ~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~-~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 439 (937)
.++++|+++||+++.||+..+++|+..+.++ .++ +.|+++| +++. ...+..++...+. . .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G-----~~~~----~~~~~~~~~~~~~----~--~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVG-----DGEY----KKELKNLIEKLNL----K--E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEES-----HCCH----HHHHHHHHHHTTC----G--T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEc-----cccc----ccccccccccccc----c--c
Confidence 4788999999999999999999999999875 555 4477675 1121 2233444443332 1 2
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHH
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 517 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~l 517 (937)
.|++ .+.++.+++..+|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 4665 567779999999999999999999999999999999994 799999977777777 567899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 518 ANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 518 A~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
+++|.++++++ +.+..+.++.++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999976 455555555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.9e-16 Score=176.91 Aligned_cols=196 Identities=16% Similarity=0.219 Sum_probs=125.0
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHH-HHhhcCCCCeEEEEcCCChhhHHHHhccc----
Q 002314 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEY---- 660 (937)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L-~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---- 660 (937)
+..+.+.+|++|+||||++..+ +..++.....+| +++.+ .+..++++|||+...+.++...+
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~ 70 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLT 70 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCC
Confidence 3456788999999999997631 234565555555 77775 69999999999987777765554
Q ss_pred CceEEeeCceEEEecC-----CeeeeccccccChhHHH-HHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHH
Q 002314 661 NLWLAAENGMFLRCTT-----GKWMTTMPEHLNMEWVD-SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQA 734 (937)
Q Consensus 661 ~l~liaenG~~ir~~~-----~~w~~~~~~~~~~~w~~-~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a 734 (937)
+..+|+.||++|...+ ..|...+ +..|.. .+.+.+..+....+....+.+...+.+++...+ .....
T Consensus 71 p~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~---~~~~~ 143 (413)
T PLN02382 71 PDITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKK---AQEVI 143 (413)
T ss_pred CCEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHH---hHHHH
Confidence 3458888999997532 1232221 223322 122222222111112233445556666654221 11112
Q ss_pred HHHHHHHhcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHh---cccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 735 RDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEI---VHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 735 ~el~~~L~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l---~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
.++.+.+ .. ....+.+ ..++.++||.|+++|||.||+.|++++ + ++++.+++||| +.||++||+.+
T Consensus 144 ~~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g------i~~~~~iafGD-s~NDleMl~~a 213 (413)
T PLN02382 144 KELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG------KAPVNTLVCGD-SGNDAELFSVP 213 (413)
T ss_pred HHHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC------CChhcEEEEeC-CHHHHHHHhcC
Confidence 3333333 21 1123444 467889999999999999999999998 5 57899999999 99999999988
Q ss_pred C
Q 002314 811 E 811 (937)
Q Consensus 811 ~ 811 (937)
+
T Consensus 214 g 214 (413)
T PLN02382 214 D 214 (413)
T ss_pred C
Confidence 6
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.4e-15 Score=160.91 Aligned_cols=188 Identities=16% Similarity=0.200 Sum_probs=124.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
+|+||+|+||||++.. ..+.+.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++|
T Consensus 1 ~KLIftDLDGTLLd~~--------------~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDLE--------------FNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCCC--------------CcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 4799999999999862 3467789999999987 599999999999999999988884 4899999
Q ss_pred ceEEEecCCeeeec-c-cc---ccChhH-------HHHHHHHHHHHHhcCC------------------Cceee------
Q 002314 669 GMFLRCTTGKWMTT-M-PE---HLNMEW-------VDSLKHVFEYFTERTP------------------RSHFE------ 712 (937)
Q Consensus 669 G~~ir~~~~~w~~~-~-~~---~~~~~w-------~~~v~~il~~~~~~~~------------------Gs~iE------ 712 (937)
|+.|..+.. |... . +. ..+..| ...++.+++....... |.-.+
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985432 3210 0 00 001111 2233344433322211 11111
Q ss_pred eecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEE------------------C---CCCHHH
Q 002314 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA------------------V---GVTKGA 771 (937)
Q Consensus 713 ~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p------------------~---gvnKG~ 771 (937)
.+++|-.+++...+.. +.+.+ ...++.++.|..++.+.. . +++||.
T Consensus 145 ~Re~SEp~~w~~~~~~--------~~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPAR--------LREAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHH--------HHHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 1234444444432211 12222 223678888887777775 5 899999
Q ss_pred HHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 772 Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|+++|.+.+... . .+ =.+|++|| +.||.+|++++..
T Consensus 212 A~~~L~~~y~~~--~-~~-~~tiaLGD-spND~~mLe~~D~ 247 (302)
T PRK12702 212 AVQLLLDCYQRH--L-GP-IKALGIGC-SPPDLAFLRWSEQ 247 (302)
T ss_pred HHHHHHHHHHhc--c-CC-ceEEEecC-ChhhHHHHHhCCe
Confidence 999999988621 0 11 26899999 9999999999976
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-15 Score=177.72 Aligned_cols=188 Identities=15% Similarity=0.135 Sum_probs=123.3
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEe
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~lia 666 (937)
.++|+||+|+||||++.. ..+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|+
T Consensus 414 ~~~KLIfsDLDGTLLd~d--------------~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~ 478 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPL--------------TYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFIT 478 (694)
T ss_pred ceeeEEEEECcCCCcCCC--------------CccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEE
Confidence 357899999999999862 2456789999999987 599999999999999999888874 47999
Q ss_pred eCceEEEecCCeee------------eccccccChhHHHHHHHHHHHHHhcCC----------Cceeeeec---------
Q 002314 667 ENGMFLRCTTGKWM------------TTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQRE--------- 715 (937)
Q Consensus 667 enG~~ir~~~~~w~------------~~~~~~~~~~w~~~v~~il~~~~~~~~----------Gs~iE~K~--------- 715 (937)
+||+.+...++... .+.....+. +.+.++++...+... +.++..+.
T Consensus 479 eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~---e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~ 555 (694)
T PRK14502 479 ENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAY---KDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSR 555 (694)
T ss_pred cCCCEEEECCCcccccccccccCCCeEEEEcCCCH---HHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHH
Confidence 99999986433100 011011222 233444443322110 11111100
Q ss_pred ----------------ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHH
Q 002314 716 ----------------TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAE 779 (937)
Q Consensus 716 ----------------~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~ 779 (937)
.+..+.+. .++ ....++.+.+ . ...+++..|..++||. .++|||.||++|++.
T Consensus 556 ~TgL~~~~a~~a~~Re~seKIl~~-gd~----e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~ 624 (694)
T PRK14502 556 LTDLNLKQAELAKQREYSETVHIE-GDK----RSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNEL 624 (694)
T ss_pred hhCCCHHHHHHHhhccCceeEEEc-CCH----HHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHHH
Confidence 00000000 001 1123333334 2 2256777799999999 599999999999999
Q ss_pred hcccccCCCCCceEEEE--ecCCCCcHHHHHhcCc
Q 002314 780 IVHSKKMKTAIDYVLCI--GHFLGKDEDVYAFFEP 812 (937)
Q Consensus 780 l~~~~~~~~~~d~vl~i--GD~d~nDEdMf~~~~~ 812 (937)
++ ++.+.+++| || +.||.+||++++.
T Consensus 625 ~g------I~~~eViafalGD-s~NDisMLe~Ag~ 652 (694)
T PRK14502 625 FR------LNFGNIHTFGLGD-SENDYSMLETVDS 652 (694)
T ss_pred hC------CCccceEEEEcCC-cHhhHHHHHhCCc
Confidence 98 456778888 99 9999999999986
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.7e-15 Score=157.85 Aligned_cols=186 Identities=16% Similarity=0.158 Sum_probs=116.3
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc--eEEeeCce
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENGM 670 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaenG~ 670 (937)
+||+|+||||++.. .++++++++|++|.+ .|+.|+++|||+...+..++..+++ ++|++||+
T Consensus 1 li~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPPG---------------YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCCC---------------CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 58999999999842 134579999999987 5999999999999999998888754 79999999
Q ss_pred EEEecCC-------------eeeeccccccChhHHHHHHHHHHHHHhcCCCceeee---ecceEEEEeeccChhhh----
Q 002314 671 FLRCTTG-------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ---RETSLVWNYKYADVEFG---- 730 (937)
Q Consensus 671 ~ir~~~~-------------~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~---K~~sl~~hyr~ad~e~~---- 730 (937)
.+..... ... ......+. +.++++++...+..+-.++.. .... .+....+...
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~~-i~~~~l~~---~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 137 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNYE-VIELGKPV---AKIRAALKEAENEYGLKYYGNSTAEEVE---KLTGLPRELAPLAK 137 (225)
T ss_pred EEEecCccccccccccccCCCeE-EEEcCCCH---HHHHHHHHHHHHhcCccchhcCCHHHHH---HHHCcCHHHHHHHH
Confidence 9986321 110 11111222 233444433322111110000 0000 0000000000
Q ss_pred ------------HHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 731 ------------RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 731 ------------~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
.....++.+.+ . ...+.+.++..++++. .++|||.|++.+++.++.. .+...+++|||
T Consensus 138 ~~~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~----~~~~~~i~~GD 207 (225)
T TIGR02461 138 RREYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLR----PGAIESVGLGD 207 (225)
T ss_pred hhhcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccc----cCcccEEEEcC
Confidence 00112233333 1 2356778887778875 4999999999999998631 24568999999
Q ss_pred CCCCcHHHHHhcCc
Q 002314 799 FLGKDEDVYAFFEP 812 (937)
Q Consensus 799 ~d~nDEdMf~~~~~ 812 (937)
+.||++||++++.
T Consensus 208 -~~nD~~ml~~ag~ 220 (225)
T TIGR02461 208 -SENDFPMFEVVDL 220 (225)
T ss_pred -CHHHHHHHHhCCC
Confidence 9999999999975
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.9e-15 Score=161.67 Aligned_cols=188 Identities=18% Similarity=0.291 Sum_probs=118.5
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc----CceEEe
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLAA 666 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~----~l~lia 666 (937)
++||++|+||||++. +..-..++.+.++ ....++..++++|||++..+.+.+... +.++|+
T Consensus 2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~ 66 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG--------------DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIIT 66 (247)
T ss_dssp SEEEEEETBTTTBHC--------------HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEE
T ss_pred CEEEEEECCCCCcCC--------------CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEe
Confidence 589999999999921 1112355666666 334578999999999999999888865 457999
Q ss_pred eCceEEEecC-----CeeeeccccccChhHH-HHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHH
Q 002314 667 ENGMFLRCTT-----GKWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (937)
Q Consensus 667 enG~~ir~~~-----~~w~~~~~~~~~~~w~-~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~ 740 (937)
++|++|.... ..|...+ ...|. +.+.+++..+..-.+..-.+..++.+++.++..+.. ....++.+.
T Consensus 67 svGt~I~~~~~~~~d~~w~~~i----~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~~ 139 (247)
T PF05116_consen 67 SVGTEIYYGENWQPDEEWQAHI----DERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRAR 139 (247)
T ss_dssp TTTTEEEESSTTEE-HHHHHHH----HTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHHH
T ss_pred cCCeEEEEcCCCcChHHHHHHH----HhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch---hHHHHHHHH
Confidence 9999998622 1233222 22343 334444443322111111223345666666544322 123445555
Q ss_pred HhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 741 LWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 741 L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
+ .. ....+.++ ++...++|.|.+++||.||++|+++++ ++.+.++++|| +.||.+||...
T Consensus 140 l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~mL~~~ 200 (247)
T PF05116_consen 140 L-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEMLEGG 200 (247)
T ss_dssp H-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHHHCCS
T ss_pred H-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHHHcCc
Confidence 5 32 22345555 467789999999999999999999998 57899999999 99999999554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.2e-13 Score=151.19 Aligned_cols=264 Identities=17% Similarity=0.141 Sum_probs=163.6
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc-hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r-~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
++.++|.+..-...+... .+..+++|-+|--|+.... .-+.. ......+-.||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~--~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPG--GPPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCC--CCHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 556888876555444444 4566777766544432111 00111 11223344689988777765443221
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll 389 (937)
.+ .++.++|+|+|.+.|.+....+.. ...+ ...++++|+|+|++.+.+++. +|.++ .
T Consensus 171 ------------~~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 ------------LN--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred ------------CC--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 11 467889999999999754321110 0111 114678999999999966654 44443 3
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl- 468 (937)
+.+|+++ |+++|... ...+ . .++ .. ...|++ .|.++.+++.++|+.||++++|+.
T Consensus 228 ~~~p~~~----~vliG~~~--~~~~---~----~~~----~~------~~nV~~-~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDWS----FVLIGPVD--VSID---P----SAL----LR------LPNVHY-LGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCCE----EEEECCCc--CccC---h----hHh----cc------CCCEEE-eCCCCHHHHHHHHHhCCEEecCCcc
Confidence 4578764 77776420 0011 0 111 00 124665 789999999999999999999986
Q ss_pred ----CcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 469 ----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 469 ----~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
.+++++.++|||||+ .|+|.|....+.+. +. +..+.+.|+++++++|.++|..+..++.++. ...++
T Consensus 284 ~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~-~~-~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAAG----KPVVATPLPEVRRY-ED-EVVLIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhccC----CCEEecCcHHHHhh-cC-cEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 357899999999994 67777765444332 23 3444466999999999998765543433322 22688
Q ss_pred cCCHHHHHHHHHHHHHH
Q 002314 545 THTAQEWAETFVSELND 561 (937)
Q Consensus 545 ~~~~~~W~~~fl~~l~~ 561 (937)
+|||+.=++.++..|.+
T Consensus 355 ~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 355 QNSWDARAAEMLEALQE 371 (373)
T ss_pred HCCHHHHHHHHHHHHHh
Confidence 99999999988876654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.9e-13 Score=146.44 Aligned_cols=168 Identities=17% Similarity=0.202 Sum_probs=130.0
Q ss_pred eeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEE
Q 002314 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (937)
Q Consensus 324 r~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv 402 (937)
...+|.++||-|+++.|.|.... +. .+...|+.++||.|+||++.+++++.++.+++|+.+ ++
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 45689999999999999874321 12 345789999999999999999999999999999976 77
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHh
Q 002314 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (937)
Q Consensus 403 qi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc 482 (937)
++| |||..-.|++.+++.- . ..+|.+ .|.++.+++...|...|||+.||+.|.|+++++||+.|
T Consensus 231 i~G-----DGPk~i~lee~lEk~~--------l--~~rV~~-lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 IIG-----DGPKRIDLEEMLEKLF--------L--QDRVVM-LGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Eec-----CCcccchHHHHHHHhh--------c--cCceEE-ecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 664 6665444444444331 1 136774 79999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcC
Q 002314 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM 527 (937)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m 527 (937)
+ -++|.+..+|..+.|.++-+...+-.++++++++.++++.
T Consensus 295 G----L~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 295 G----LPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred C----CEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 3 4555566666666774343445566788999999888863
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.7e-12 Score=145.48 Aligned_cols=217 Identities=10% Similarity=0.051 Sum_probs=139.7
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 002314 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (937)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (937)
.+|.+..-+....+.+.. .|. ...+|.+++++||.+.+.+. . ....+++++ .++
T Consensus 150 ~~d~~~~~s~~~~~~l~~-----~g~-----------~~~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~ 206 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALK-----RGL-----------EPSQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDL 206 (382)
T ss_pred CCCEEEECCHHHHHHHHH-----cCC-----------CHHHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCC
Confidence 578887766544333221 121 23567788899987543321 1 123456666 367
Q ss_pred cEEEEEecccccCCHHHHHHHHHHhHHh----CcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcc
Q 002314 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (937)
Q Consensus 364 ~iIL~VdRld~~KGi~~~l~Af~~ll~~----~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 439 (937)
++|+++||....||+..+++++..++.. .|+. .++.+++ +++ .++++++++.. + .
T Consensus 207 ~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~----~~~vi~G----~~~---~~~~~L~~~~~--~--------~ 265 (382)
T PLN02605 207 PAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIG----QVVVICG----RNK---KLQSKLESRDW--K--------I 265 (382)
T ss_pred cEEEEECCCcccccHHHHHHHHHHhhccccccCCCc----eEEEEEC----CCH---HHHHHHHhhcc--c--------C
Confidence 8999999999999999999999876521 2333 2333432 222 22333433210 1 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC-----CCcccccCCceEEECCCCH
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSLGAGAILVNPWNI 514 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~-----aG~~~~lg~~gllVnP~D~ 514 (937)
.|+ +.|+++ ++..+|++||++|.+| .+++++|||||+ .|+|++.. .|.++.+-.+|.-+.+.|+
T Consensus 266 ~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~ 334 (382)
T PLN02605 266 PVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESP 334 (382)
T ss_pred CeE-EEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCH
Confidence 355 357764 7999999999999866 378999999994 78898875 2333434123333345899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHH
Q 002314 515 TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (937)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~ 558 (937)
++++++|.++|.+.++.++++.++++++...+.+..-++.+++.
T Consensus 335 ~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 335 KEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 99999999999974566777777778888777776666655443
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-11 Score=141.97 Aligned_cols=251 Identities=15% Similarity=0.122 Sum_probs=171.6
Q ss_pred HhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--
Q 002314 283 RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-- 360 (937)
Q Consensus 283 ~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-- 360 (937)
+....+|.+.-.++...+.|..... .++. ..+.+...+||.+.+........ .+.....|...
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~~---~L~~-----------~d~~~~y~ei~~s~~~~~~~~~~-~~~~~~~r~~~~v 269 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATFV---SLSN-----------SDITSTYPEIDGSWFTYGQYESH-LELRLPVRLYRGV 269 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhhh---hcCC-----------CCcceeeccccchhccccccccc-hhcccccceeeee
Confidence 3455678886666655555544222 2221 11556667788776653211100 00001111111
Q ss_pred -cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCcc-CcEEEEEEEcC-CCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 361 -AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 361 -~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~-~~v~Lvqi~~p-~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
..+.+++.+-|+.+-||+...|.||.++...-|+.. ....++..+.+ +.+...+..++..++.+++++.+- +|
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g--- 345 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG--- 345 (495)
T ss_pred cccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC---
Confidence 236788899999999999999999999988775411 12445545422 333344555666778888876532 12
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHH
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 515 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~ 515 (937)
.++++....++.+.+.++..+.+.+.++-.|-||+|++|||||+ .|+|++..+|.++.+ |.+|++++| +.+
T Consensus 346 --~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e 418 (495)
T KOG0853|consen 346 --QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG----LPVVATNNGGPAEIVVHGVTGLLIDP-GQE 418 (495)
T ss_pred --ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC----CCEEEecCCCceEEEEcCCcceeeCC-chH
Confidence 34556677888888888888899999998899999999999994 799999999999998 889999999 676
Q ss_pred ---HHHHHHHHHHcCCHHHHHHHHHhhhhhhhc-CCHHHHHHHHHHHHH
Q 002314 516 ---EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELN 560 (937)
Q Consensus 516 ---~lA~aI~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~~l~ 560 (937)
.+|++|.++..++. .+.++.+++++.|++ |+|+.-.+++.+-+.
T Consensus 419 ~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 419 AVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred HHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 59999999999875 578888899999977 887555555554444
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.5e-10 Score=124.03 Aligned_cols=198 Identities=24% Similarity=0.334 Sum_probs=143.0
Q ss_pred EEEEEecccChhhhhhh-hcCCchHHHHHHHHHHhcC--CcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEE
Q 002314 327 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (937)
Q Consensus 327 ~i~v~P~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvq 403 (937)
++.++|+|++.+.+... .. ...+ ..+++++||+.+.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 67788999999987642 00 0112 36899999999999999999999999887665 44666
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 404 i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
+|..... ...+.+++.+.+.. ..|.+ .+.++.+++..+|+.||++++||..||||++++|||+|+
T Consensus 236 ~g~~~~~--------~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER--------REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc--------HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 6543211 11222233333221 13554 788888899999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCcccccCCc--eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHH
Q 002314 484 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (937)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~--gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~ 560 (937)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..-+..++..+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 688889888888887433 78888888999999999999887 34444444344444 57777777766555554
Q ss_pred H
Q 002314 561 D 561 (937)
Q Consensus 561 ~ 561 (937)
.
T Consensus 376 ~ 376 (381)
T COG0438 376 E 376 (381)
T ss_pred H
Confidence 4
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.5e-10 Score=130.85 Aligned_cols=270 Identities=12% Similarity=0.068 Sum_probs=161.3
Q ss_pred HHHHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHH
Q 002314 222 ADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARH 301 (937)
Q Consensus 222 A~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~ 301 (937)
..++++..+| |+|++| +....++.+.+....++|+...++ -|-. + ...+. -.+|.+...+....+.
T Consensus 96 l~~~l~~~~p-D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~t-d~~~-------~-~~~~~---~~ad~i~~~s~~~~~~ 161 (380)
T PRK13609 96 LKLLLQAEKP-DIVINT-FPIIAVPELKKQTGISIPTYNVLT-DFCL-------H-KIWVH---REVDRYFVATDHVKKV 161 (380)
T ss_pred HHHHHHHhCc-CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeC-CCCC-------C-ccccc---CCCCEEEECCHHHHHH
Confidence 3444455555 899985 555567766666556677653332 1110 0 01111 1579888777655444
Q ss_pred HHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---CCc-EEEEEecccccCC
Q 002314 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKG 377 (937)
Q Consensus 302 Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-iIL~VdRld~~KG 377 (937)
+.+ .|. ...++.++++.++. .|.... + ...++++++ +++ ++++.|++...||
T Consensus 162 l~~-----~gi-----------~~~ki~v~G~p~~~-~f~~~~---~----~~~~~~~~~l~~~~~~il~~~G~~~~~k~ 217 (380)
T PRK13609 162 LVD-----IGV-----------PPEQVVETGIPIRS-SFELKI---N----PDIIYNKYQLCPNKKILLIMAGAHGVLGN 217 (380)
T ss_pred HHH-----cCC-----------ChhHEEEECcccCh-HHcCcC---C----HHHHHHHcCCCCCCcEEEEEcCCCCCCcC
Confidence 332 121 12345554444432 343211 1 123455552 445 4556789999999
Q ss_pred HHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 002314 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (937)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (937)
+..+++++.. .|++ .++++++. +.+ +++++++++.+.+ ..|++ .|++ +++..+|
T Consensus 218 ~~~li~~l~~----~~~~----~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~--~~~~~l~ 271 (380)
T PRK13609 218 VKELCQSLMS----VPDL----QVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYV--ENIDELF 271 (380)
T ss_pred HHHHHHHHhh----CCCc----EEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eech--hhHHHHH
Confidence 9999888753 3544 36656532 122 3345555543322 14665 4666 4688999
Q ss_pred HHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeC-CCCcc----cccCCceEEECCCCHHHHHHHHHHHHcCCHHHH
Q 002314 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAA----QSLGAGAILVNPWNITEVANAIARALNMSPEER 532 (937)
Q Consensus 458 ~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe-~aG~~----~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er 532 (937)
+.||+++. ++.|++++|||||+ .|+|++. ..|.- ..+...|..+.+.|.++++++|.++++++ +.+
T Consensus 272 ~~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~ 342 (380)
T PRK13609 272 RVTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKL 342 (380)
T ss_pred HhccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHH
Confidence 99999874 45589999999994 6788775 34421 12223455556789999999999999865 456
Q ss_pred HHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHH
Q 002314 533 EKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (937)
Q Consensus 533 ~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~ 564 (937)
.++.++.+++...+++...++.+++.+....+
T Consensus 343 ~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 343 LQMKEAMKSLYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHhhhhhhh
Confidence 66666667777788999999988877655443
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.30 E-value=3e-10 Score=128.05 Aligned_cols=248 Identities=17% Similarity=0.142 Sum_probs=151.2
Q ss_pred HHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHH
Q 002314 224 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 224 ~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl 303 (937)
++++..+ +|+|+.|.....+ +..+..+..++|+.++.|..||. .. +.++ ...+|.|...++...+.
T Consensus 83 ~~i~~~~-pDvI~~~~~~~~~-~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~-- 148 (350)
T cd03785 83 KILKKFK-PDVVVGFGGYVSG-PVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY-- 148 (350)
T ss_pred HHHHhcC-CCEEEECCCCcch-HHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc--
Confidence 3344444 5999998765433 33333344467777655554542 10 1111 11367777665532221
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~ 380 (937)
-...++.++|+|+|.+.|.+.. . ++++ .++++|+.+++....|+...
T Consensus 149 -------------------~~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~ 198 (350)
T cd03785 149 -------------------FPKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINE 198 (350)
T ss_pred -------------------CCCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHH
Confidence 0135778899999988775321 1 2333 35778888888877888776
Q ss_pred HH-HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 381 KL-LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 381 ~l-~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
++ +|++.+.+ ++ +.++.++++ + +.+++++ ++.+. + ..|++ .+.+ +++..+|+.
T Consensus 199 ~l~~a~~~l~~--~~----~~~~~i~G~----g-~~~~l~~----~~~~~----~----~~v~~-~g~~--~~~~~~l~~ 252 (350)
T cd03785 199 AVPEALAELLR--KR----LQVIHQTGK----G-DLEEVKK----AYEEL----G----VNYEV-FPFI--DDMAAAYAA 252 (350)
T ss_pred HHHHHHHHhhc--cC----eEEEEEcCC----c-cHHHHHH----HHhcc----C----CCeEE-eehh--hhHHHHHHh
Confidence 55 77776642 22 333333322 2 2233333 33221 1 13554 5554 789999999
Q ss_pred ccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC--------ccccc--CCceEEECCC--CHHHHHHHHHHHHcC
Q 002314 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVANAIARALNM 527 (937)
Q Consensus 460 ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG--------~~~~l--g~~gllVnP~--D~~~lA~aI~~aL~m 527 (937)
||++|.+| | +.+++|||+|+ .|+|++...+ .++.+ +..|++|++. |.++++++|.++++.
T Consensus 253 ad~~v~~s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~ 324 (350)
T cd03785 253 ADLVISRA---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD 324 (350)
T ss_pred cCEEEECC---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC
Confidence 99999877 3 57899999994 6777765443 13344 3568999987 999999999999974
Q ss_pred CHHHHHHHHHhhhhhhhcCCHHH
Q 002314 528 SPEEREKRHWHNFTHVTTHTAQE 550 (937)
Q Consensus 528 ~~~er~~r~~~~~~~V~~~~~~~ 550 (937)
++.++++..++++++..+...+
T Consensus 325 -~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 325 -PERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred -HHHHHHHHHHHHhcCCCCHHHH
Confidence 4566667777777777665544
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.30 E-value=8e-11 Score=122.26 Aligned_cols=118 Identities=29% Similarity=0.362 Sum_probs=85.3
Q ss_pred EEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC
Q 002314 368 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447 (937)
Q Consensus 368 ~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~ 447 (937)
++||+.+.||+..+++|+..+.+++|++ .|+++|... + ..+ .. ++... .+. ...|.+ .+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~~--~-~~~--~~----~~~~~----~~~--~~~v~~-~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDGP--E-REY--LE----ELLAA----LLL--LDRVIF-LGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCCC--C-hHH--HH----HHHHh----cCC--cccEEE-eCC
Confidence 9999999999999999999998888765 477776432 1 111 11 11111 111 134665 455
Q ss_pred C-CHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEE
Q 002314 448 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (937)
Q Consensus 448 v-~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllV 509 (937)
+ +.+++..+++.||+++.||..||++++++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 55666777777999999999999999999999994 799999998888766 4556654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.3e-10 Score=127.61 Aligned_cols=252 Identities=16% Similarity=0.078 Sum_probs=158.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
.+|+|+.|+....+.+.++ .+..+.|+.++.|..+|.. .+.++- ..+|.+...++.- +.
T Consensus 91 ~pDvv~~~~~~~~~~~~~~-~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~~------- 149 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGGLA-ARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---FP------- 149 (357)
T ss_pred CCCEEEECCCcchhHHHHH-HHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---hh-------
Confidence 3699999985544444433 3455788887766544420 011111 1345554443311 00
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCHHHHH-HHHHHh
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 388 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi~~~l-~Af~~l 388 (937)
+....++.++|+|||.+.+.+. .. ...+ .. .+.++|+++++....|++..++ +|+.++
T Consensus 150 -----------~~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 150 -----------EFFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred -----------ccCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 0123678999999998766431 10 0111 11 3677889999999999987776 888877
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002314 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (937)
Q Consensus 389 l~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (937)
... | ..++++|. ++ .+++.+. .. . +. .|. +.+++ +++..+|..||+++.+|
T Consensus 210 ~~~-~-----~~~~~~G~-----g~-~~~~~~~----~~-~----~~----~v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQTGK-----GD-LEEVRAA----YA-A----GI----NAE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEcCC-----Cc-HHHHHHH----hh-c----CC----cEE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 432 2 23555542 22 1222222 11 1 11 144 35665 68999999999999877
Q ss_pred CcCCChhHHHHHHhcCCCCceEEEeCCCCc--------cccc--CCceEEECCCC--HHHHHHHHHHHHcCCHHHHHHHH
Q 002314 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 536 (937)
Q Consensus 469 ~EG~nLv~~EamAc~~~~~g~lVlSe~aG~--------~~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~ 536 (937)
| +.+++|||+|+ .|+|++-..|. ++.+ +..|++++|.| +++++++|.+++++ ++.++.+.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999994 67777644321 2334 35688999888 99999999999997 45667777
Q ss_pred HhhhhhhhcCCHHHHHHHHHHHHH
Q 002314 537 WHNFTHVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 537 ~~~~~~V~~~~~~~W~~~fl~~l~ 560 (937)
++++++.+.++...-++.+++.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHhh
Confidence 778888888888888887776543
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-09 Score=124.54 Aligned_cols=251 Identities=14% Similarity=0.096 Sum_probs=144.3
Q ss_pred CCEEEEeCcccchH-HHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhh--cCCEEEEeCHHHHHHHHHHHHH
Q 002314 232 GDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 232 ~DvVwvHDyhl~ll-p~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll--~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
+|+|++|......+ ...+.. ..++|+++..+-. -+.+.+. |+.+++.+-+. .+|++.-.+....+++++
T Consensus 87 pDiv~~~gd~~~~la~a~aa~-~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~---- 158 (365)
T TIGR00236 87 PDIVLVQGDTTTTLAGALAAF-YLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTEQAKDNLLR---- 158 (365)
T ss_pred CCEEEEeCCchHHHHHHHHHH-HhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCHHHHHHHHH----
Confidence 49999995444434 444433 4478887543321 1111111 12223322221 256666666666555543
Q ss_pred HhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc-CCcEEEEE-ecc-cccCCHHHHHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGV-DRL-DMIKGIPQKLLAF 385 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIL~V-dRl-d~~KGi~~~l~Af 385 (937)
+|. ...+|.++++|+....+...... ....++++++ ++.+++.. .|. ...||+..+++|+
T Consensus 159 -~G~-----------~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~ 221 (365)
T TIGR00236 159 -ENV-----------KADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKAI 221 (365)
T ss_pred -cCC-----------CcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHHH
Confidence 121 24578899999633322221110 1123445553 33455554 465 3459999999999
Q ss_pred HHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002314 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (937)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 465 (937)
.++.+++|+++ +++++.|. ++ .+.++ ...++ .. ..|++ .+.+...++..+|+.||+++.
T Consensus 222 ~~l~~~~~~~~----~vi~~~~~----~~---~~~~~---~~~~~----~~--~~v~~-~~~~~~~~~~~~l~~ad~vv~ 280 (365)
T TIGR00236 222 REIVEEFEDVQ----IVYPVHLN----PV---VREPL---HKHLG----DS--KRVHL-IEPLEYLDFLNLAANSHLILT 280 (365)
T ss_pred HHHHHHCCCCE----EEEECCCC----hH---HHHHH---HHHhC----CC--CCEEE-ECCCChHHHHHHHHhCCEEEE
Confidence 99988888754 55444332 11 12222 22221 11 24654 578899999999999999999
Q ss_pred CCCCcCCChhHHHHHHhcCCCCceEEEe-CCCCccccc-CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 466 TSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 466 ~Sl~EG~nLv~~EamAc~~~~~g~lVlS-e~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
+| |.+.+|||+|+ .|+|.+ ..+|..+.+ ...+++| |.|+++++++|.++|+.+ +.++++....
T Consensus 281 ~S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~-~~~~~~~~~~ 345 (365)
T TIGR00236 281 DS-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP-DEYKKMSNAS 345 (365)
T ss_pred CC-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh-HHHHHhhhcC
Confidence 88 45679999994 677775 444443443 2345666 579999999999999855 3344433333
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.21 E-value=1e-08 Score=123.39 Aligned_cols=182 Identities=14% Similarity=0.121 Sum_probs=127.1
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHhHH--hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcc
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~Af~~ll~--~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 439 (937)
+..+|.+|.|+...||.+.++.+++++++ .+|+. .+.||+.|.+...+... +++.+.+.++..+ -.|. .
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~g-k~~i~~i~~la~~--~~~~----~ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGEG-KEIIQRIVEFSKR--PEFR----G 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccchH-HHHHHHHHHHHhc--ccCC----C
Confidence 45588899999999999999999999985 55542 47788787654433221 3455555555543 0021 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEE-CCC-CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECC----
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 511 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv-~Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP---- 511 (937)
.|.|+. ..+.+--..+|..||+++. ||. +|..|+.-+=||.- |.|.+|-.-|...+. +.+|+.+.+
T Consensus 459 kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 466654 4465666688999999999 888 99999999999885 788888888877665 568999985
Q ss_pred --------CCHHHHHHHHHHHH-c----CC----HHHHHHHHHhhhh-hhhcCCHHHHHHHHHHH
Q 002314 512 --------WNITEVANAIARAL-N----MS----PEEREKRHWHNFT-HVTTHTAQEWAETFVSE 558 (937)
Q Consensus 512 --------~D~~~lA~aI~~aL-~----m~----~~er~~r~~~~~~-~V~~~~~~~W~~~fl~~ 558 (937)
.|.+++-++|.+++ . .+ +.+..++++++.. ....++|.+=++.+++.
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998877 2 21 1123344443332 23468888888877654
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.6e-10 Score=124.24 Aligned_cols=181 Identities=15% Similarity=0.096 Sum_probs=118.5
Q ss_pred EEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCHHHH-HHHHHHhHHhCcCccCcEEEEEEEc
Q 002314 329 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQK-LLAFEKFLEENSDWRGKVVLLQIAV 406 (937)
Q Consensus 329 ~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi~~~-l~Af~~ll~~~P~~~~~v~Lvqi~~ 406 (937)
.++|+|||...+.+. . . ...+ .+ .++++|+++||....|++..+ ++|++.+.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 688999997665421 0 0 0111 12 366789999998888987664 4788776542 22 2333332
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCC
Q 002314 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (937)
Q Consensus 407 p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~ 486 (937)
+++. +++++.+.+.+. ..+..+. ..++..+|+.||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~~-----~~l~~~~~~~~l-------~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-----EKVKNVYQELGI-------EAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-----HHHHHHHhhCCc-------eEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2221 233444433221 1233222 237899999999999875 4 68999999994
Q ss_pred CceEEEeCCCCcc-------ccc--CCceEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHH
Q 002314 487 KGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (937)
Q Consensus 487 ~g~lVlSe~aG~~-------~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~ 553 (937)
.|+|++...|.. +.+ +.+|++++|.| +++++++|.+++++ ++.++++.+++++++..+...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 788887765532 334 46799999876 99999999999975 4566777778888888777776654
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.7e-09 Score=121.11 Aligned_cols=262 Identities=11% Similarity=0.052 Sum_probs=153.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
.+|+|+++.. ...+..+.+....++|+.. +++-+- ..+ ..+ --.+|.+...+....+.+.. .
T Consensus 104 kPDvVi~~~p-~~~~~~l~~~~~~~iP~~~-v~td~~------~~~--~w~---~~~~d~~~v~s~~~~~~l~~-----~ 165 (391)
T PRK13608 104 KPDLILLTFP-TPVMSVLTEQFNINIPVAT-VMTDYR------LHK--NWI---TPYSTRYYVATKETKQDFID-----V 165 (391)
T ss_pred CcCEEEECCc-HHHHHHHHHhcCCCCCEEE-EeCCCC------ccc--ccc---cCCCCEEEECCHHHHHHHHH-----c
Confidence 4589888632 2233333333344677743 344331 111 001 12478887777654444332 1
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---CCc-EEEEEecccccCCHHHHHHHHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKGIPQKLLAFE 386 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-iIL~VdRld~~KGi~~~l~Af~ 386 (937)
|. ...+|.++++.|+. .|.+.. + ...++++++ +++ +++++||+...||+..+++++
T Consensus 166 gi-----------~~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~- 225 (391)
T PRK13608 166 GI-----------DPSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI- 225 (391)
T ss_pred CC-----------CHHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH-
Confidence 21 23456666666664 343211 1 123344442 444 556799999999999999885
Q ss_pred HhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002314 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (937)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (937)
++..|++ .++++++. .+ ++.+++.+.. +. . ..|++ .|++ +++..+|+.||++|..
T Consensus 226 --~~~~~~~----~~vvv~G~----~~---~l~~~l~~~~---~~----~--~~v~~-~G~~--~~~~~~~~~aDl~I~k 280 (391)
T PRK13608 226 --LAKSANA----QVVMICGK----SK---ELKRSLTAKF---KS----N--ENVLI-LGYT--KHMNEWMASSQLMITK 280 (391)
T ss_pred --HhcCCCc----eEEEEcCC----CH---HHHHHHHHHh---cc----C--CCeEE-Eecc--chHHHHHHhhhEEEeC
Confidence 3344554 35555431 22 1223333222 11 1 13553 5665 5799999999999963
Q ss_pred CCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccc-----cCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-----LGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 467 Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~-----lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
+.|+++.|||||+ .|+|++...+..+. +...|.-+-+.|.++++++|.++++++ +++.++.+++++
T Consensus 281 ----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~ 351 (391)
T PRK13608 281 ----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTMEQ 351 (391)
T ss_pred ----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHHH
Confidence 4588999999994 68888753322221 112233333569999999999999865 566677778888
Q ss_pred hhhcCCHHHHHHHHHHHHHHhHH
Q 002314 542 HVTTHTAQEWAETFVSELNDTVV 564 (937)
Q Consensus 542 ~V~~~~~~~W~~~fl~~l~~~~~ 564 (937)
....+++...++.+++.+.....
T Consensus 352 ~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 352 DKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred hcCCCCHHHHHHHHHHHhhhhhh
Confidence 88889999888888877665443
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.1e-09 Score=120.52 Aligned_cols=241 Identities=14% Similarity=0.072 Sum_probs=139.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc--hHHHHhhhcCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR--SDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r--~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
.+|+|++|++....++..+..+..++|+.++.|.-.. .+ +..|+. +..+. -.+|.+..-+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s-~~--~~~~~~~~r~~~~--~~ad~~~~~s~~~~~~l~~---- 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS-FD--RGMPDEENRHAID--KLSDLHFAPTEEARRNLLQ---- 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc-CC--CCCCchHHHHHHH--HHhhhccCCCHHHHHHHHH----
Confidence 4699999987666555555444458888876553110 00 011211 11111 1345554444443333222
Q ss_pred HhCcccCCCceeeCCeeeEEEEEeccc-ChhhhhhhhcCCchHHHHHHHHHHh--c-CCcEEEEEecccc---cCCHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQK 381 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~iIL~VdRld~---~KGi~~~ 381 (937)
.+....+|.++++++ |...+....... ...++.+ . ++.+++.++|+.. .||+..+
T Consensus 159 ------------~G~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l 220 (363)
T cd03786 159 ------------EGEPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEI 220 (363)
T ss_pred ------------cCCCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHH
Confidence 122346788888885 554433221100 1112222 2 3456678999875 7999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|++.+... + +.++..+ +.+... ++++.+.+.+.. . ..|.+ .+....+++..+|+.||
T Consensus 221 ~~al~~l~~~--~----~~vi~~~-----~~~~~~----~l~~~~~~~~~~---~--~~v~~-~~~~~~~~~~~l~~~ad 279 (363)
T cd03786 221 LEALAELAEE--D----VPVVFPN-----HPRTRP----RIREAGLEFLGH---H--PNVLL-ISPLGYLYFLLLLKNAD 279 (363)
T ss_pred HHHHHHHHhc--C----CEEEEEC-----CCChHH----HHHHHHHhhccC---C--CCEEE-ECCcCHHHHHHHHHcCc
Confidence 9999987442 2 3344332 222222 333333333210 0 13554 56667889999999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCC-CHHHHHHHHHHHHcCC
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMS 528 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~-D~~~lA~aI~~aL~m~ 528 (937)
++|.+|- |+ ..|||+|+ .|+|++...+...++..+|+.+.+. |.++++++|.++++++
T Consensus 280 ~~v~~Sg----gi-~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 280 LVLTDSG----GI-QEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDE 338 (363)
T ss_pred EEEEcCc----cH-HhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCc
Confidence 9999994 44 68999994 6888886555454443566555443 7999999999999876
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.1e-09 Score=111.54 Aligned_cols=309 Identities=13% Similarity=0.223 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHHHH---hCC-CCCEEEE--eCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHh
Q 002314 211 FAAYIKANQMFADVVNK---HYK-DGDVVWC--HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~---~~~-~~DvVwv--HDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ 284 (937)
|..+.-.-|+.+..|+. +++ |+| ||| -.|.+.. |. +|+ +.+.||+-..|.|--|.+.+..+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pd-i~IDtMGY~fs~-p~-~r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPD-IFIDTMGYPFSY-PI-FRR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCch-heEecCCCcchh-HH-HHH-HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 55555566666665553 344 556 466 4455442 32 333 45899999999988777766543322111 1
Q ss_pred hhcCCEEEEeCHHHHHHHHHH------HHHHhCccc--CCCce-eeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHH
Q 002314 285 VLAADLVGFHTYDYARHFVSA------CTRILGFEG--TPEGV-EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 355 (937)
Q Consensus 285 ll~aDlIgF~t~~~~~~Fl~~------~~r~lg~~~--~~~~v-~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~ 355 (937)
+| .+----|-|.|..- |..+.-+.. +...| +.-++ ..+.++.+-.+++.+.....+
T Consensus 200 ~l-----~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~-~~~~iVyPPC~~e~lks~~~t--------- 264 (465)
T KOG1387|consen 200 IL-----VWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS-NTCSIVYPPCSTEDLKSKFGT--------- 264 (465)
T ss_pred hh-----hhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc-cceeEEcCCCCHHHHHHHhcc---------
Confidence 11 11112344555431 111100000 00111 11122 233333333455444332211
Q ss_pred HHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcC--ccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhccc
Q 002314 356 LQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (937)
Q Consensus 356 lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~--~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~ 433 (937)
+-.....+|+++.+-|.|+.. .|+-+..++.+.|. ....+.|+++| ..|+.. ++ +.-+.++.++.+++-.
T Consensus 265 ---e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRnee-D~-ervk~Lkd~a~~L~i~- 336 (465)
T KOG1387|consen 265 ---EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNEE-DE-ERVKSLKDLAEELKIP- 336 (465)
T ss_pred ---cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCChh-hH-HHHHHHHHHHHhcCCc-
Confidence 012456899999999999999 78888888888887 33457787666 455432 22 3345667777776642
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc--ccc----C-Cce
Q 002314 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QSL----G-AGA 506 (937)
Q Consensus 434 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~--~~l----g-~~g 506 (937)
..|.| .-+++.+++..+|..|-+.|-+-..|-||+.+.||||+ |.+.++..+|.. ..+ | .+|
T Consensus 337 -----~~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA-----GlIpi~h~SgGP~lDIV~~~~G~~tG 405 (465)
T KOG1387|consen 337 -----KHVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA-----GLIPIVHNSGGPLLDIVTPWDGETTG 405 (465)
T ss_pred -----cceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc-----CceEEEeCCCCCceeeeeccCCccce
Confidence 24664 78899999999999999999999999999999999999 455555444443 222 4 468
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 507 llVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
++. | +.++-|++|.+++.+..+||..+...+|..+.+++-+..-++|...+..
T Consensus 406 Fla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 406 FLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred eec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 887 3 5678999999999999999888777888888888888877777655543
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.5e-10 Score=114.30 Aligned_cols=190 Identities=17% Similarity=0.224 Sum_probs=115.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc---CceEEe
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 666 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~l~lia 666 (937)
..++||+|+||||++..-.| ......|.+|.. .|..|+.+|..+...+..+-..+ +.++|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 46899999999999964433 234566777764 69999999999999987776665 478999
Q ss_pred eCceEEEecCCeeeecc--c------cccCh-hHHHHHHHHHHHHHhcCCCceee----------------------eec
Q 002314 667 ENGMFLRCTTGKWMTTM--P------EHLNM-EWVDSLKHVFEYFTERTPRSHFE----------------------QRE 715 (937)
Q Consensus 667 enG~~ir~~~~~w~~~~--~------~~~~~-~w~~~v~~il~~~~~~~~Gs~iE----------------------~K~ 715 (937)
|||+.|..+. .|...- + ..... .-.+.+++.++.+.+...-.++. ..+
T Consensus 70 EnG~aI~~p~-~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 70 ENGAAIYLPK-GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cCCceEEecc-cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 9999998532 222100 0 00000 01223333333332211111110 011
Q ss_pred ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCC-ceEE
Q 002314 716 TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVL 794 (937)
Q Consensus 716 ~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~-d~vl 794 (937)
++.++-.|..| +.+.++ ...+...++.+++|....-|.-....||.|++++++.+.. .+. .-++
T Consensus 149 yseti~~rs~d---------~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~r-----l~~~r~t~ 213 (274)
T COG3769 149 YSETIIWRSSD---------ERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRR-----LGGARTTL 213 (274)
T ss_pred hhhheeecccc---------hHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHh-----cCceeEEE
Confidence 11111122111 111111 2222334788999988888888778899999999998752 233 3489
Q ss_pred EEecCCCCcHHHHHhcCc
Q 002314 795 CIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 795 ~iGD~d~nDEdMf~~~~~ 812 (937)
.+|| +.||.+||+.+..
T Consensus 214 ~~GD-g~nD~Pl~ev~d~ 230 (274)
T COG3769 214 GLGD-GPNDAPLLEVMDY 230 (274)
T ss_pred ecCC-CCCcccHHHhhhh
Confidence 9999 9999999998865
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.01 E-value=4e-08 Score=116.82 Aligned_cols=275 Identities=12% Similarity=0.112 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHHh----CCCCCEEE--EeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCcc--chHHHHhh
Q 002314 214 YIKANQMFADVVNKH----YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS--RSDLLRAV 285 (937)
Q Consensus 214 Y~~vN~~fA~~i~~~----~~~~DvVw--vHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~--r~eil~~l 285 (937)
|...+..++..+.+. ..++|++. ++.-|... +....|.-++.+..|+ -+ . |. -+..+..+
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~--~-----~~~~y~~~l~~~ 270 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ER--N-----RHHTYLDLYESL 270 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Cc--c-----cccchhhhhhCh
Confidence 334444444443333 56788887 67666665 3333343345446665 11 1 21 24566677
Q ss_pred hcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcE
Q 002314 286 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKV 365 (937)
Q Consensus 286 l~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~i 365 (937)
-.+|.|...|..-.+..... ++. .. ...+|..+|++.- +.... ..++..++.|
T Consensus 271 ~~~d~iIv~T~~q~~~l~~~----~~~--------~~-~~~~v~~Ip~~~~--~~~~~------------~s~r~~~~~I 323 (519)
T TIGR03713 271 SRADLIIVDREDIERLLEEN----YRE--------NY-VEFDISRITPFDT--RLRLG------------QSQQLYETEI 323 (519)
T ss_pred hhcCeEEEcCHHHHHHHHHH----hhh--------cc-cCCcceeeCccce--EEecC------------hhhcccceEE
Confidence 78887776665433322211 110 00 1234555676544 11110 1122234556
Q ss_pred EEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC--------
Q 002314 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-------- 437 (937)
Q Consensus 366 IL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~-------- 437 (937)
.+++||| +.|-+..+|+|+.++++++|++. |.+.|... .. ++.+.+++++.++|..++...
T Consensus 324 ~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~---~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 392 (519)
T TIGR03713 324 GFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN---DN---DITQLLEDILEQINEEYNQDKNFFSLSEQ 392 (519)
T ss_pred EEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC---ch---hHHHHHHHHHHHHHhhhchhhhccccchh
Confidence 6667799 99999999999999999999865 66565432 11 234566667677765432100
Q ss_pred --------------cccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-
Q 002314 438 --------------AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (937)
Q Consensus 438 --------------~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l- 502 (937)
-...+.|.+..+..++...|.-|.++|.+|..|||+ +.+||++. |++++ .-|.++.+
T Consensus 393 ~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~-----GiPqI--nyg~~~~V~ 464 (519)
T TIGR03713 393 DENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA-----GIPQI--NKVETDYVE 464 (519)
T ss_pred hhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc-----CCCee--ecCCceeeE
Confidence 002344677778889999999999999999999999 99999997 54444 56777777
Q ss_pred -CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHH
Q 002314 503 -GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 549 (937)
Q Consensus 503 -g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~ 549 (937)
|.+|++| .|..++++||..+|..+. ...+.....++.+..++..
T Consensus 465 d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS~~ 509 (519)
T TIGR03713 465 HNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYSSE 509 (519)
T ss_pred cCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhHH
Confidence 8899999 699999999999998653 3344444555555555433
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=5.4e-08 Score=109.89 Aligned_cols=239 Identities=14% Similarity=0.031 Sum_probs=142.7
Q ss_pred HHHhCCCCCEEEEeCcccch--HHH-HHHh-hCCCCeEEEEEccCCCchhhhccCc-cchHHHHhhhcCCEEEEeCHHHH
Q 002314 225 VNKHYKDGDVVWCHDYHLMF--LPK-CLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 299 (937)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~l--lp~-~Lr~-~~~~~~I~~flH~PfPs~e~fr~lp-~r~eil~~ll~aDlIgF~t~~~~ 299 (937)
+...+++||+|++|...++. ++. ++++ +..++|+++++|--||-. +.... ........+-.||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 45568899999999854432 222 2222 112799999999876632 11111 12233444457899999988755
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHH
Q 002314 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (937)
Q Consensus 300 ~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~ 379 (937)
+.+.+ .|. ...++.++++..+...... +....+++.|+++||+....++.
T Consensus 136 ~~l~~-----~g~-----------~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGL-----------TTDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCC-----------CcCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 121 1223444444332211100 01123456899999999433211
Q ss_pred HHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
+..|+ +.|+++|. +++.. .. ...|+| .|.++.+|+..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~-----g~~~~-----------~~--------~~~V~f-~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGP-----NPEDL-----------EN--------SANISY-KGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECC-----Ccccc-----------cc--------CCCeEE-ecCCCHHHHHHHHhc
Confidence 12344 44776653 22110 00 024665 789999999999998
Q ss_pred ccEEEECCC-----------CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHc
Q 002314 460 TDVALVTSL-----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (937)
Q Consensus 460 ADv~vv~Sl-----------~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (937)
|+.+++.- .-.++--..|||||+ .|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 66665432 123445588999994 799999998888888 56799998 678899999874
Q ss_pred CCHHHHHHHHHhhhhhhh
Q 002314 527 MSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 527 m~~~er~~r~~~~~~~V~ 544 (937)
.++++.++.++.++..+
T Consensus 298 -~~~~~~~m~~n~~~~~~ 314 (333)
T PRK09814 298 -TEEEYQEMVENVKKISK 314 (333)
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 35666666666665543
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-09 Score=104.38 Aligned_cols=130 Identities=25% Similarity=0.301 Sum_probs=88.7
Q ss_pred CcEEEEEecccccCCHHHHHH-HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 002314 363 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (937)
Q Consensus 363 ~~iIL~VdRld~~KGi~~~l~-Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (937)
..+|++.|++.+.||+..+++ |++++.+++|++ .|+++|. +++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G~-----~~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIGN-----GPD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEECE-----SS-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEeC-----CHH------HHHHh-cC----------CCE
Confidence 357889999999999999999 999999999974 4777764 222 12222 11 246
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 002314 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (937)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA 518 (937)
++ .+.+ +++.++|+.||+++.|+. .++++..++|||+++ .|+|+|.. |....+ ...++++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 65 5677 689999999999999985 689999999999994 78888877 555544 2456677 88999999
Q ss_pred HHHHHHHcC
Q 002314 519 NAIARALNM 527 (937)
Q Consensus 519 ~aI~~aL~m 527 (937)
++|.+++++
T Consensus 127 ~~i~~l~~d 135 (135)
T PF13692_consen 127 EAIERLLND 135 (135)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHHhcC
Confidence 999999863
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.6e-08 Score=111.99 Aligned_cols=151 Identities=19% Similarity=0.191 Sum_probs=96.2
Q ss_pred HHHHHhc---CCcEE-EEEe-cccccC-CHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q 002314 355 ELQETFA---GRKVM-LGVD-RLDMIK-GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR 428 (937)
Q Consensus 355 ~lr~~~~---~~~iI-L~Vd-Rld~~K-Gi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~ 428 (937)
.++++++ ++++| +..| |....| ++..+++|++.+.+++|+++ +++++. +.+. ++++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~----~~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKR----REQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----Chhh----HHHHHHHHhh
Confidence 3445553 45554 3334 666654 47889999999988888653 555542 1222 2334444332
Q ss_pred hhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEe---------------
Q 002314 429 INGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS--------------- 493 (937)
Q Consensus 429 IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS--------------- 493 (937)
.. |. .+.++. .++..+|+.||++|.+| |.+.+|+|+|+ .|+|++
T Consensus 243 ~~---~~----~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~ 301 (380)
T PRK00025 243 YA---GL----EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLV 301 (380)
T ss_pred cC---CC----CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHH
Confidence 20 11 244332 47899999999999998 78888999994 677776
Q ss_pred --CCCCcccccC----CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 494 --EFAGAAQSLG----AGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 494 --e~aG~~~~lg----~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
.+.|..+.+. ..+++.+..|+++++++|.++|+++ +.++++.+++
T Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 352 (380)
T PRK00025 302 KVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG-ARRQALLEGF 352 (380)
T ss_pred cCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 3444455551 1346778889999999999999865 3444444443
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.8e-07 Score=105.95 Aligned_cols=306 Identities=16% Similarity=0.191 Sum_probs=153.3
Q ss_pred EEEEeCcccchHHHHHHhhCCCCeEEEEEccCCC-------chhhhccCcc---chH-----------HHH-hhhcCCEE
Q 002314 234 VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS---RSD-----------LLR-AVLAADLV 291 (937)
Q Consensus 234 vVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfP-------s~e~fr~lp~---r~e-----------il~-~ll~aDlI 291 (937)
+.|.|.|..-+-..++|++.|++.-+|+.|.--+ ..++|..|+. .++ +-+ ....||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 3477888887777889999999999999996422 1122333331 000 110 11122332
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhc----CCchHHHHHHH-HHHh-c----
Q 002314 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE----INPVQVHIKEL-QETF-A---- 361 (937)
Q Consensus 292 gF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~----~~~~~~~~~~l-r~~~-~---- 361 (937)
-+-+.--+. .|..+| +|... .|.|||+|.+.|...-. ....++.+.++ +..+ +
T Consensus 226 TTVSeITa~----Ea~~LL------------~r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~df 288 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLL------------KRKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDF 288 (633)
T ss_dssp EESSHHHHH----HHHHHH------------SS--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S
T ss_pred eehhhhHHH----HHHHHh------------CCCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 222221111 122222 22222 36799999987754311 00122333333 2222 1
Q ss_pred --CCcEEE-EEeccc-ccCCHHHHHHHHHHhHH---hCcCccCcEEEEEEEcCCCCChhH---------HHHHHHHHHHH
Q 002314 362 --GRKVML-GVDRLD-MIKGIPQKLLAFEKFLE---ENSDWRGKVVLLQIAVPTRTDVPE---------YQRLTSQVHEI 425 (937)
Q Consensus 362 --~~~iIL-~VdRld-~~KGi~~~l~Af~~ll~---~~P~~~~~v~Lvqi~~p~r~~~~~---------y~~l~~~l~~l 425 (937)
++.+++ ..||.+ ..||++..|+|+.+|-. ..-. +.-|+..|..|+....-. +.+|++.+.++
T Consensus 289 d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i 366 (633)
T PF05693_consen 289 DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEI 366 (633)
T ss_dssp -GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHH
Confidence 345554 588997 67999999999998843 2111 122333344465443210 12222222222
Q ss_pred HHHhhc-----------------------------------------------------------cc----CCCCcccEE
Q 002314 426 VGRING-----------------------------------------------------------RF----GTLTAVPIH 442 (937)
Q Consensus 426 v~~IN~-----------------------------------------------------------~~----g~~~~~pV~ 442 (937)
.++|.. +. ...+-..|+
T Consensus 367 ~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVI 446 (633)
T PF05693_consen 367 QEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVI 446 (633)
T ss_dssp HHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEE
T ss_pred HHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEE
Confidence 222211 00 012234566
Q ss_pred EeCCCCC------HHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-------CCceEEE
Q 002314 443 HLDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-------GAGAILV 509 (937)
Q Consensus 443 ~~~~~v~------~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-------g~~gllV 509 (937)
|...+++ .-++..+.+.+|+.|+||+||.+|.+++|+.|. +.|-|.|..+|....+ ...|+.|
T Consensus 447 F~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~----gVPsITTnLsGFG~~~~~~~~~~~~~GV~V 522 (633)
T PF05693_consen 447 FHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF----GVPSITTNLSGFGCWMQEHIEDPEEYGVYV 522 (633)
T ss_dssp E--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT----T--EEEETTBHHHHHHHTTS-HHGGGTEEE
T ss_pred EeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhc----CCceeeccchhHHHHHHHhhccCcCCcEEE
Confidence 5544443 336788899999999999999999999999998 4799999999987544 2346655
Q ss_pred -CC--CC----HHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 510 -NP--WN----ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 510 -nP--~D----~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
+= .+ ++++|+.|.....++..+|.....+..+.-...+|.+-...+.+.-..+
T Consensus 523 vdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 523 VDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp E-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 32 23 3467777778888888777766666655556677777666665544433
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-06 Score=108.16 Aligned_cols=181 Identities=16% Similarity=0.125 Sum_probs=123.0
Q ss_pred EEEEEecccccCCHHHHHHHHHHhHH--hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 002314 365 VMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (937)
Q Consensus 365 iIL~VdRld~~KGi~~~l~Af~~ll~--~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (937)
+|.++.|+...||...++..+++|.+ .+|+ ..+.||..|.+...+... +++.+++.++... -+|. ..|.
T Consensus 480 tigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~g-K~iIk~i~~~a~~--p~~~----~kVv 550 (778)
T cd04299 480 TIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEPG-KELIQEIVEFSRR--PEFR----GRIV 550 (778)
T ss_pred EEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchHH-HHHHHHHHHHHhC--cCCC----CcEE
Confidence 78899999999999999999999865 2444 247888887654433221 3445555555431 0221 1577
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECC-------
Q 002314 443 HLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------- 511 (937)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP------- 511 (937)
|+. ..+..--..++..|||++.||. .|.-|+.-+=||.- |+|-+|..-|...+. |.+|..|.+
T Consensus 551 fle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~~ 624 (778)
T cd04299 551 FLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYEDD 624 (778)
T ss_pred EEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccCh
Confidence 654 4566666788999999999999 99999998888874 889999888888776 788999988
Q ss_pred -----CCHHHHHHHHHHHHc----CC-----HHHHHHHHHhhhh-hhhcCCHHHHHHHHHHHHH
Q 002314 512 -----WNITEVANAIARALN----MS-----PEEREKRHWHNFT-HVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 512 -----~D~~~lA~aI~~aL~----m~-----~~er~~r~~~~~~-~V~~~~~~~W~~~fl~~l~ 560 (937)
.|.+++-+.|.+.+- .. +.+-.+++++... ..-.+++.+=++.|++.+.
T Consensus 625 ~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 625 EYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 556666666654433 10 1233344443332 2346777777777776654
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.3e-05 Score=92.40 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=83.9
Q ss_pred CCcEEEE--Eecccc-cCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCc
Q 002314 362 GRKVMLG--VDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (937)
Q Consensus 362 ~~~iIL~--VdRld~-~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~ 438 (937)
++++|+. .+|..+ .|+++.+++|++.+.+.+|+++ +++.+.+. .. ...++++....+ . .
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~----~~~~~~~~~~~~----~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KR----RLQFEQIKAEYG----P-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hh----HHHHHHHHHHhC----C-C-
Confidence 5566543 359887 7999999999999998888764 44333221 11 122233332221 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeC-----------------CCCcccc
Q 002314 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQS 501 (937)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe-----------------~aG~~~~ 501 (937)
..|.++.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++- +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13544432 3457999999999999 77778999995 6767662 2222222
Q ss_pred c-CCceE--EE-CCCCHHHHHHHHHHHHcCC
Q 002314 502 L-GAGAI--LV-NPWNITEVANAIARALNMS 528 (937)
Q Consensus 502 l-g~~gl--lV-nP~D~~~lA~aI~~aL~m~ 528 (937)
+ +.+++ ++ +-.+++.++++|.++|+++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 3 22221 12 3357889999999999876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.2e-07 Score=86.20 Aligned_cols=62 Identities=18% Similarity=0.280 Sum_probs=48.0
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
+++||+||||++...... ......+.+.+.+.|++|.+. |..++|+||+....+..++...+
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~ 62 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELG 62 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcC
Confidence 479999999998742100 001246788999999999974 89999999999999998887654
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.43 E-value=1e-06 Score=80.06 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=73.2
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
|++.|+..+|++...+|+|||+ +++|.+...+....+ |..++.++ |+++++++|..+|+.| +++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4677888999999999999993 566655566777777 55788888 9999999999999965 6888888899
Q ss_pred hhhhh-cCCHHHHHHHHH
Q 002314 540 FTHVT-THTAQEWAETFV 556 (937)
Q Consensus 540 ~~~V~-~~~~~~W~~~fl 556 (937)
+++|. .|++.+-+++||
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 99985 899998888876
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-06 Score=90.72 Aligned_cols=172 Identities=18% Similarity=0.278 Sum_probs=104.2
Q ss_pred HHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc-cc----CceEEeeCceEEEecCC-eeeeccccccChhHHH-HHHHHH
Q 002314 627 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ-EY----NLWLAAENGMFLRCTTG-KWMTTMPEHLNMEWVD-SLKHVF 699 (937)
Q Consensus 627 ~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~-~~----~l~liaenG~~ir~~~~-~w~~~~~~~~~~~w~~-~v~~il 699 (937)
+.+.|.+|.+ ...|+||||-.+..+.+.+. .- -.++-++||...+..+. .|...+.+....+-+. .+..++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899986 79999999999999888774 22 24799999998875443 4543331222222222 233333
Q ss_pred HHHHh----cCCCceeeeecceEEEEe--eccChh----hhH----HH-HHHHHHHHhcCCCCCCCeEEEE-cCeEEEEE
Q 002314 700 EYFTE----RTPRSHFEQRETSLVWNY--KYADVE----FGR----IQ-ARDMLQHLWTGPISNASVEVVQ-GSKSVEVR 763 (937)
Q Consensus 700 ~~~~~----~~~Gs~iE~K~~sl~~hy--r~ad~e----~~~----~~-a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~ 763 (937)
.+..+ ..-|.+||.+...+.+.- |++..+ |.. .. -..+.+.| ..-+...++++.. |.-.++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 33322 134899999999998863 333211 110 01 12344455 3334555787765 57899999
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec---CCCCcHHHHHhc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH---FLGKDEDVYAFF 810 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD---~d~nDEdMf~~~ 810 (937)
|+|++|..++++|.+. ..+.+++||| -+.||-++|...
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei~~~~ 198 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEIFEDP 198 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHHHHST
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCceeeecC
Confidence 9999999999987553 1689999999 235888888653
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-05 Score=81.21 Aligned_cols=187 Identities=18% Similarity=0.270 Sum_probs=119.1
Q ss_pred HHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc--C-
Q 002314 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N- 661 (937)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~- 661 (937)
++++-..-|+.+|.||||++. ...++|++.+.|++|.. ..++-+|-|.+++-+.+.++.- +
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~ 68 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEE 68 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhh
Confidence 445556679999999999986 35689999999999875 7899999999988887777542 2
Q ss_pred -ceEEeeCceEEEecCCeee--eccccccC-hhHHHHHHHHHHHHHhc----CCCceeeeecceEEEEe--eccCh----
Q 002314 662 -LWLAAENGMFLRCTTGKWM--TTMPEHLN-MEWVDSLKHVFEYFTER----TPRSHFEQRETSLVWNY--KYADV---- 727 (937)
Q Consensus 662 -l~liaenG~~ir~~~~~w~--~~~~~~~~-~~w~~~v~~il~~~~~~----~~Gs~iE~K~~sl~~hy--r~ad~---- 727 (937)
.+.-+|||..-...+.... ... ..+. ...++-+.-.+.+..+- ..|.+||-+...+.+.- |++..
T Consensus 69 fDY~F~ENGl~~yk~gk~~~~Qsi~-~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~ 147 (252)
T KOG3189|consen 69 FDYVFSENGLVAYKGGKLLSKQSII-NHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERN 147 (252)
T ss_pred hcccccCCCeeEeeCCcchhHHHHH-HHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHH
Confidence 4778999988764333211 111 0011 11122222233343321 34889988776665442 33321
Q ss_pred hhhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 728 EFGR-----IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 728 e~~~-----~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
+|.. ..-..+...| .+-+...++.... |.-.++|-|.||+|-..+++|-+. + .+.+-+|||
T Consensus 148 eF~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGD 214 (252)
T KOG3189|consen 148 EFEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGD 214 (252)
T ss_pred HHHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEecc
Confidence 1211 1112344444 3334556777544 466899999999999999887554 3 678999999
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00023 Score=80.74 Aligned_cols=304 Identities=19% Similarity=0.211 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcc------cchHHHHHHhhCCCCeEEEEEccCC---------CchhhhccCccc-
Q 002314 215 IKANQMFADVVNKHYKDGDVVWCHDYH------LMFLPKCLKEYNSDMKVGWFLHTPF---------PSSEIHRTLPSR- 278 (937)
Q Consensus 215 ~~vN~~fA~~i~~~~~~~DvVwvHDyh------l~llp~~Lr~~~~~~~I~~flH~Pf---------Ps~e~fr~lp~r- 278 (937)
++.+.+|+-.--..-.++-.||+|--. +..|-.-|+++.|+.+|..+.-||- +..-..+.+|..
T Consensus 32 ~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~ 111 (419)
T COG1519 32 KRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDL 111 (419)
T ss_pred HHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCc
Confidence 345677761111122256799999744 2333444888999999999876652 222223445532
Q ss_pred hHHHHhh---hcCCEEEEeCHHHHHHHHHHHHHHhCccc-------CCCce-eeC---------CeeeEEEEEecccChh
Q 002314 279 SDLLRAV---LAADLVGFHTYDYARHFVSACTRILGFEG-------TPEGV-EDQ---------GRLTRVAAFPIGIDSE 338 (937)
Q Consensus 279 ~eil~~l---l~aDlIgF~t~~~~~~Fl~~~~r~lg~~~-------~~~~v-~~~---------gr~~~i~v~P~GID~~ 338 (937)
.-..+.. ...|+..|...+.=-|++..|.+. |... +..+. .|. -......+.-.-+|.+
T Consensus 112 ~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~ 190 (419)
T COG1519 112 PIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQ 190 (419)
T ss_pred hHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHH
Confidence 1222222 245666666666666666666432 1110 00000 000 0000000111112222
Q ss_pred hhhhh---------------hcCCchHHHHHHHHHHhcC-CcEEEEEecccccCCH-HHHHHHHHHhHHhCcCccCcEEE
Q 002314 339 RFIRA---------------LEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVL 401 (937)
Q Consensus 339 ~f~~~---------------~~~~~~~~~~~~lr~~~~~-~~iIL~VdRld~~KGi-~~~l~Af~~ll~~~P~~~~~v~L 401 (937)
+|... ...+........+|.++++ +++++..+. ..|= .-.+.++..+++++|+.. |
T Consensus 191 Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST---H~GEeei~l~~~~~l~~~~~~~l----l 263 (419)
T COG1519 191 RFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST---HEGEEEIILDAHQALKKQFPNLL----L 263 (419)
T ss_pred HHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC---CCchHHHHHHHHHHHHhhCCCce----E
Confidence 22211 0122334566778888876 899999888 3343 447889999999999753 3
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC-------cccEEEeCCCCCHHHHHHHHHHccEEEECC-C--CcC
Q 002314 402 LQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-------AVPIHHLDRSLDFPALCALYAVTDVALVTS-L--RDG 471 (937)
Q Consensus 402 vqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~-------~~pV~~~~~~v~~~el~aly~~ADv~vv~S-l--~EG 471 (937)
|+| | ..|| -...+++++.+.|-+++.-. -.+|... -+.-|+..+|+.|||+.+-- + .-|
T Consensus 264 IlV--P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~---DtmGEL~l~y~~adiAFVGGSlv~~GG 332 (419)
T COG1519 264 ILV--P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLG---DTMGELGLLYGIADIAFVGGSLVPIGG 332 (419)
T ss_pred EEe--c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEE---ecHhHHHHHHhhccEEEECCcccCCCC
Confidence 333 4 2343 23567788887776553211 1244421 25689999999999988743 3 468
Q ss_pred CChhHHHHHHhcCCCCceEEEe----CCCCccccc-C-CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhc
Q 002314 472 MNLVSYEFVACQDLKKGVLILS----EFAGAAQSL-G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTT 545 (937)
Q Consensus 472 ~nLv~~EamAc~~~~~g~lVlS----e~aG~~~~l-g-~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~ 545 (937)
.|+ +|+.+|. .|+|.. .|.-+++.+ . .+++.|+. .+.++.++...+.+ +++|.++.+++.+.|.+
T Consensus 333 HN~--LEpa~~~----~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 333 HNP--LEPAAFG----TPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVELLLAD-EDKREAYGRAGLEFLAQ 403 (419)
T ss_pred CCh--hhHHHcC----CCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHH
Confidence 887 9999993 455543 344444444 2 35677764 77888888888776 67888888888887765
Q ss_pred C
Q 002314 546 H 546 (937)
Q Consensus 546 ~ 546 (937)
+
T Consensus 404 ~ 404 (419)
T COG1519 404 N 404 (419)
T ss_pred h
Confidence 4
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00022 Score=83.44 Aligned_cols=121 Identities=14% Similarity=0.216 Sum_probs=91.5
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (937)
...|+|++.+.+..|++. |=+ |.++ + +...|.++ .+ | ..++.+.+ +....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999975 543 4333 1 11334444 22 2 23554444 45567899999
Q ss_pred HccEEEECCCCcCCChhHHHHHHhcCCCCceEEEe--CCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCH
Q 002314 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS--EFAGAAQSLGAGAILVNPWNITEVANAIARALNMSP 529 (937)
Q Consensus 459 ~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS--e~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (937)
.||+++.+|..||+++.+.||+.. |.+|+| ...|-.+.+ ..|.+|++.|+++|+++|.++|+++.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999996 667776 444555555 56999999999999999999999874
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.4e-06 Score=83.52 Aligned_cols=77 Identities=13% Similarity=0.085 Sum_probs=55.1
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH---HHhcc-------cC-
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQE-------YN- 661 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~---~~~~~-------~~- 661 (937)
++++|+||||+..... +.... .. ....+++.+.+++++|.+ .|+.|+++|||+..... +++.. ++
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~-~~-~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVP-II-GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccc-cc-ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999976310 00000 00 013678999999999987 69999999999988774 66655 22
Q ss_pred ceEEeeCceEEE
Q 002314 662 LWLAAENGMFLR 673 (937)
Q Consensus 662 l~liaenG~~ir 673 (937)
.++++.||+.+.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 378899998875
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.7e-05 Score=79.64 Aligned_cols=38 Identities=26% Similarity=0.115 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+|..+++.++++++ .+++.++++|| +.||.+|++.++-
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~~~~ag~ 113 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPVMEKVGL 113 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 58899999999988 46789999999 9999999998864
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.2e-05 Score=83.13 Aligned_cols=37 Identities=24% Similarity=0.106 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|..+++.++++++ ..++++++||| +.+|.+|++.++-
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~a~~aG~ 133 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPVMEKVGL 133 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 6788999999988 46899999999 9999999999975
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.86 E-value=2.7e-05 Score=75.24 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=41.0
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhH
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 653 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 653 (937)
|+|++|+||||+.....|- ....+.++++++|++|.+ .|+.|+++|||+....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTY 54 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhh
Confidence 6899999999986532110 114578899999999976 5999999999988654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00013 Score=79.69 Aligned_cols=72 Identities=15% Similarity=0.284 Sum_probs=57.4
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc----e
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----W 663 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~ 663 (937)
...++|+||+||||++... ..++ +|.+.++|.+|.+ .|..++|+|+++...+...+..+++ .
T Consensus 124 ~~~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFd 190 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFD 190 (301)
T ss_pred ccceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccC
Confidence 4568999999999998742 2334 4999999999987 5999999999999998888888754 3
Q ss_pred EEeeCceEEE
Q 002314 664 LAAENGMFLR 673 (937)
Q Consensus 664 liaenG~~ir 673 (937)
.|..+|...+
T Consensus 191 vIIs~Gdv~~ 200 (301)
T TIGR01684 191 IIISGGHKAE 200 (301)
T ss_pred EEEECCcccc
Confidence 6777776654
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=1.8e-05 Score=88.81 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 766 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+..|+.+++.++++++ ++++++++||| +.||.+|++.++-
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m~~~AGl 285 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPMIKAAGL 285 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHHHHHCCC
Confidence 3589999999999998 57899999999 9999999999976
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00081 Score=71.18 Aligned_cols=47 Identities=17% Similarity=0.142 Sum_probs=39.6
Q ss_pred EEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 759 SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 759 ~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
++-..-.+-.|..+++.+++.++ ++++.++++|| +.||.+||+.++.
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpml~~ag~ 181 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPMLEAAGL 181 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHHHHhCCC
Confidence 33344455689999999999998 56889999999 9999999999976
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0035 Score=66.39 Aligned_cols=36 Identities=17% Similarity=0.078 Sum_probs=28.7
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHh
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 809 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~ 809 (937)
.+-.|..+++++++.++ .+.+++||| +.+|..|-+.
T Consensus 152 ~~~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~aa~~ 187 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEARKP 187 (224)
T ss_pred CCccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHhhhc
Confidence 34568999999988875 357999999 9999988444
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0011 Score=67.71 Aligned_cols=38 Identities=16% Similarity=0.052 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|-..++.++++++ +.++++++||| +.||.+|++.++-
T Consensus 82 pkp~~~~~~~~~l~------~~~~ev~~iGD-~~nDi~~~~~ag~ 119 (169)
T TIGR02726 82 KKTEPYAQMLEEMN------ISDAEVCYVGD-DLVDLSMMKRVGL 119 (169)
T ss_pred CCHHHHHHHHHHcC------cCHHHEEEECC-CHHHHHHHHHCCC
Confidence 45567888888887 46789999999 9999999999975
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00097 Score=72.96 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=54.0
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc----eE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WL 664 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~l 664 (937)
..++|+||+||||+.... ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...+..+++ ..
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 458999999999998742 2223 5899999999987 6999999998888888888877643 24
Q ss_pred EeeCceEEE
Q 002314 665 AAENGMFLR 673 (937)
Q Consensus 665 iaenG~~ir 673 (937)
|..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 555665443
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0016 Score=63.26 Aligned_cols=64 Identities=22% Similarity=0.357 Sum_probs=47.5
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC--------hhhHHHHhcccCc
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKNFQEYNL 662 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~--------~~~L~~~~~~~~l 662 (937)
|+|+||+||||++.... .+ +.....+.+.+.++|+.|.+ .|..++|+|+++ ...+...+..+++
T Consensus 1 k~~~~D~dgtL~~~~~~----~~--~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY----VD--DEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCC----CC--CHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 68999999999963110 00 11235678999999999986 599999999998 6677777776554
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.01 Score=62.59 Aligned_cols=38 Identities=13% Similarity=0.086 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|+..++.++++++ ++++.+++||| +.+|.+|.+.++-
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~aa~~ag~ 189 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSMIKAAGL 189 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHHHHhCCC
Confidence 48999999999987 46789999999 9999999999865
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0045 Score=67.19 Aligned_cols=64 Identities=5% Similarity=0.163 Sum_probs=50.2
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhcccCc-----e
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL-----W 663 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~l-----~ 663 (937)
++|+||+||||.... ..+ +.+.++|++|.+ .|..|+++|| |+...+.+.+..+++ -
T Consensus 2 ~~~~~D~DGtl~~~~--------------~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ 65 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK--------------ERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLET 65 (249)
T ss_pred CEEEEeCCCceEcCC--------------eeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 689999999999762 223 478999999987 5999999995 889998888877643 2
Q ss_pred EEeeCceE
Q 002314 664 LAAENGMF 671 (937)
Q Consensus 664 liaenG~~ 671 (937)
+++.+|+.
T Consensus 66 iit~~~~~ 73 (249)
T TIGR01457 66 VFTASMAT 73 (249)
T ss_pred EeeHHHHH
Confidence 66666664
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.19 Score=55.84 Aligned_cols=137 Identities=15% Similarity=0.209 Sum_probs=94.9
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHhHH-------hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCC
Q 002314 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLE-------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (937)
Q Consensus 363 ~~iIL~VdRld~~KGi~~~l~Af~~ll~-------~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~ 435 (937)
..++++--.+.+-..+--+++|+..+-+ .+|. + |++|+ |.||..+.+.++|++.
T Consensus 255 pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~---------- 315 (444)
T KOG2941|consen 255 PALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK---------- 315 (444)
T ss_pred CeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh----------
Confidence 3567778889999999999999985522 1332 3 34444 3455544555555543
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEE--CCCCcCCChh--HHHHHHhcCCCCceEEEeCCCCccccc--CCceEEE
Q 002314 436 LTAVPIHHLDRSLDFPALCALYAVTDVALV--TSLRDGMNLV--SYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (937)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv--~Sl~EG~nLv--~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllV 509 (937)
.|+.|.+.+-.+.-|+++.++..||..|. ||. -|+-|+ +....-| +-|+++-.|....|.+ |+||+++
T Consensus 316 -~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc----glPvcA~~fkcl~ELVkh~eNGlvF 389 (444)
T KOG2941|consen 316 -NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC----GLPVCAVNFKCLDELVKHGENGLVF 389 (444)
T ss_pred -cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC----CCceeeecchhHHHHHhcCCCceEe
Confidence 35678888889999999999999997664 443 455553 4455556 2345555666555555 8999999
Q ss_pred CCCCHHHHHHHHHHHHc
Q 002314 510 NPWNITEVANAIARALN 526 (937)
Q Consensus 510 nP~D~~~lA~aI~~aL~ 526 (937)
+ |.+++|+.|..+++
T Consensus 390 ~--Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 390 E--DSEELAEQLQMLFK 404 (444)
T ss_pred c--cHHHHHHHHHHHHh
Confidence 7 89999999999998
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.006 Score=59.24 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=43.2
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC-ChhhHHHHhcc
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQE 659 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~~~~ 659 (937)
|+|++|+||||.+...... ....+- ....+-+.+.+.|+.|.+ .|..++|+|++ ....+...+..
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~~-~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPII-DLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcch-hhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998731100 000000 000357899999999987 58999999999 66666555543
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0034 Score=68.44 Aligned_cols=51 Identities=8% Similarity=0.112 Sum_probs=39.8
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 654 (937)
++|+||+||||...... ...+.|.+.++|++|.+ .|..++++|||+....+
T Consensus 2 k~i~~D~DGtl~~~~~~-----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~ 52 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK-----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQ 52 (257)
T ss_pred CEEEEeCCCeEEeCCCc-----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHH
Confidence 68999999999975210 11256799999999987 59999999998776533
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.017 Score=62.67 Aligned_cols=96 Identities=22% Similarity=0.330 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCC------CCeEEEEEccC-CCc---hhhhc--cCc
Q 002314 209 SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FPS---SEIHR--TLP 276 (937)
Q Consensus 209 ~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~------~~~I~~flH~P-fPs---~e~fr--~lp 276 (937)
+....|.-.+++-++.+...-..+||||+||||..++|.+||.... ++++.+++|.. |.. .+.+. .+|
T Consensus 111 d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~ 190 (245)
T PF08323_consen 111 DNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLP 190 (245)
T ss_dssp THHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-G
T ss_pred hHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCC
Confidence 3344555455555554444322579999999999999999998753 69999999974 221 12221 123
Q ss_pred cc--------------hHHHHhhhcCCEEEEeCHHHHHHHHH
Q 002314 277 SR--------------SDLLRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 277 ~r--------------~eil~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
+. .-+-.|+..||.|..-++.|++.-++
T Consensus 191 ~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 191 DEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 21 25567889999999999999876543
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0044 Score=67.25 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=44.4
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
.++|+||+||||.... .+.|.+.++|++|.+ .|..++++|+|+......+...+
T Consensus 1 ~~~v~~DlDGtL~~~~---------------~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHDN---------------VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeCC---------------eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 3689999999999762 357889999999987 59999999999987766665554
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.014 Score=62.86 Aligned_cols=83 Identities=8% Similarity=-0.013 Sum_probs=53.9
Q ss_pred cchHHHHHHHHhcCCeEEEEecCcccCCCCCC--CC---CCCccc--------c-------ccccCCChhHHHHHHHhhc
Q 002314 577 LREADSIERYLRSNNRLLILGFNATLTEPVDT--PG---RRGDQI--------R-------EMELKLHPDLKQPLNALCH 636 (937)
Q Consensus 577 L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~--P~---~~~~~~--------~-------~~~~~~~~~~~~~L~~L~~ 636 (937)
.+++++.+.+...+.-.|+||+||||++..+. -+ ....++ . .....+-+.+.+.|+.|.+
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~ 128 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHH
Confidence 36778888887777679999999999987641 00 000000 0 0112334448999999987
Q ss_pred CCCCeEEEEcCC----ChhhHHHHhccc
Q 002314 637 DPKTTIVVLSGS----DRNVLDKNFQEY 660 (937)
Q Consensus 637 d~g~~V~IvSGR----~~~~L~~~~~~~ 660 (937)
.|.+++|||+| ....++.++..+
T Consensus 129 -~G~~i~iVTnr~~~k~~~~a~~ll~~l 155 (237)
T TIGR01672 129 -RGDAIFFVTGRTPGKTDTVSKTLAKNF 155 (237)
T ss_pred -CCCEEEEEeCCCCCcCHHHHHHHHHHh
Confidence 59999999999 444555555443
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.0054 Score=68.84 Aligned_cols=54 Identities=11% Similarity=0.134 Sum_probs=42.6
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
+.++|+||+||||.... .+-+.+.++|++|.+ .|.+++++|+|+......++..
T Consensus 27 ~~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~ 80 (311)
T PLN02645 27 SVETFIFDCDGVIWKGD---------------KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKK 80 (311)
T ss_pred hCCEEEEeCcCCeEeCC---------------ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHH
Confidence 46899999999999752 244788999999987 5999999999996555544433
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.041 Score=60.57 Aligned_cols=41 Identities=12% Similarity=-0.066 Sum_probs=33.4
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+.+-.|..+++.++++++ ++++.+++||| ..+|..|-+.++
T Consensus 154 ~~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~aA~~aG 194 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLAAKAAG 194 (272)
T ss_pred CCCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHHHHHCC
Confidence 334456778999999988 46799999999 999999987765
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.0065 Score=67.05 Aligned_cols=49 Identities=10% Similarity=0.165 Sum_probs=38.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHH
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 655 (937)
.++|+||+||||.... .+-+.+.++|++|.+ .|..++++|||+......
T Consensus 2 ~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~ 50 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGE---------------RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAE 50 (279)
T ss_pred ccEEEEeCCCceEcCC---------------eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHH
Confidence 5789999999998752 134569999999987 589999999987544333
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.00051 Score=84.11 Aligned_cols=221 Identities=15% Similarity=0.100 Sum_probs=131.3
Q ss_pred CCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhh--
Q 002314 575 PSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV-- 652 (937)
Q Consensus 575 ~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~-- 652 (937)
..++..++.+.....+.-|.++|+||||-.+..+| ..+.++..++.+-.+..+ ...-+++|||.+..
T Consensus 173 spfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~---------arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v 241 (732)
T KOG1050|consen 173 SPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDY---------ARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSV 241 (732)
T ss_pred CCCChHHHHHhcccHHHHHHhhhccCccccccccH---------HHHHHHHHHHHHHhhhhc--cCCcceEEeccceeee
Confidence 34566777777777777899999999999998877 345666666666666554 23456799999665
Q ss_pred --------HHHHhcccCceEEeeCceEEEecC-Ceeeecccccc-----ChhHHHHHHHHHHHHHhc-------------
Q 002314 653 --------LDKNFQEYNLWLAAENGMFLRCTT-GKWMTTMPEHL-----NMEWVDSLKHVFEYFTER------------- 705 (937)
Q Consensus 653 --------L~~~~~~~~l~liaenG~~ir~~~-~~w~~~~~~~~-----~~~w~~~v~~il~~~~~~------------- 705 (937)
..++.+..+++.+++||.+++... +.-..+--+.. ...+.....+.++.|.+-
T Consensus 242 ~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~ 321 (732)
T KOG1050|consen 242 KALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPK 321 (732)
T ss_pred eecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCC
Confidence 777777778999999999998522 11100000111 112334444445444321
Q ss_pred -CCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC-CCeEEEEcCeEEEEEE-CCCCHHHHHHHHHHHhcc
Q 002314 706 -TPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVH 782 (937)
Q Consensus 706 -~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~-~~v~v~~Gk~~vEV~p-~gvnKG~Av~~Ll~~l~~ 782 (937)
++|.-+++-..++..||+..+..++...+ ..+ ..+... ...+...+..+.|++| ..+.||.++..+...++.
T Consensus 322 ~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~----~pV-~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~ 396 (732)
T KOG1050|consen 322 RTDGKEVEELKFCVSVHVRRINEKFGSASY----QPV-HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQ 396 (732)
T ss_pred cccchHHHHHHHHhHhhhhhhhhccCCccc----ceE-EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhh
Confidence 22222222234444555544433332110 000 000111 1233445667889998 689999999988877663
Q ss_pred cccCCCCCceEEEEecCCCCcHHHHHhcCcC
Q 002314 783 SKKMKTAIDYVLCIGHFLGKDEDVYAFFEPE 813 (937)
Q Consensus 783 ~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~ 813 (937)
.. -..+.=...++|| +.+||+.+..++.+
T Consensus 397 ~~-~~~~lVlsef~G~-~~tl~d~aivvnpw 425 (732)
T KOG1050|consen 397 EN-KKSVLVLSEFIGD-DTTLEDAAIVVNPW 425 (732)
T ss_pred cc-cCCceEEeeeccc-cccccccCEEECCc
Confidence 21 0112234589999 99999999999886
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.69 Score=52.62 Aligned_cols=257 Identities=16% Similarity=0.133 Sum_probs=131.3
Q ss_pred CCCCEEEEeCccc--chHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHL--MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 230 ~~~DvVwvHDyhl--~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
+++|++..=|+.= +.+...+|+..|++||.++. ++.+|.--|.|...+.. .+|++.-..+-- ..|.+
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVWAWr~~Ra~~i~~--~~D~lLailPFE-~~~y~--- 152 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVWAWRPKRAVKIAK--YVDHLLAILPFE-PAFYD--- 152 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----CcceeeechhhHHHHHH--HhhHeeeecCCC-HHHHH---
Confidence 4678888777663 36789999999999999875 23444433344222222 234432111111 11111
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---C-CcEEEEEe-cc-cccCCHHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---G-RKVMLGVD-RL-DMIKGIPQK 381 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~-~~iIL~Vd-Rl-d~~KGi~~~ 381 (937)
-.|.+ ..|-|+. =.|.-.+.+ ..+..|++++ + +.+.+.-| |- +-..-++-.
T Consensus 153 -k~g~~-----~~yVGHp--------l~d~i~~~~---------~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f 209 (381)
T COG0763 153 -KFGLP-----CTYVGHP--------LADEIPLLP---------DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPF 209 (381)
T ss_pred -hcCCC-----eEEeCCh--------hhhhccccc---------cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHH
Confidence 00100 1122211 112111111 1123555552 3 44444444 33 445567777
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|++.+.+++|+++ ++.-.. .+.|+.+..+ ....-. . . ..++ +...+....|.+||
T Consensus 210 ~~a~~~l~~~~~~~~----~vlp~~-----~~~~~~~~~~---~~~~~~----~-~-~~~~-----~~~~~~~~a~~~aD 266 (381)
T COG0763 210 VQAAQELKARYPDLK----FVLPLV-----NAKYRRIIEE---ALKWEV----A-G-LSLI-----LIDGEKRKAFAAAD 266 (381)
T ss_pred HHHHHHHHhhCCCce----EEEecC-----cHHHHHHHHH---Hhhccc----c-C-ceEE-----ecCchHHHHHHHhh
Confidence 889999999999986 332221 1333333322 211100 0 0 0122 23467788899999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc-----------------cccCCceEEEC-----CCCHHHHHH
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-----------------QSLGAGAILVN-----PWNITEVAN 519 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~-----------------~~lg~~gllVn-----P~D~~~lA~ 519 (937)
+.+..| |.+.+|++.|+ .|.|++--+... ..+ .+-.+|+ -..++.+|.
T Consensus 267 ~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi-~~~~ivPEliq~~~~pe~la~ 336 (381)
T COG0763 267 AALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVKLPYVSLPNIL-AGREIVPELIQEDCTPENLAR 336 (381)
T ss_pred HHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhccCCcccchHHh-cCCccchHHHhhhcCHHHHHH
Confidence 999998 79999999995 566665333222 222 1111121 134788999
Q ss_pred HHHHHHcCCHH--HHHHHHHhhhhhhhcCCHHHHHH
Q 002314 520 AIARALNMSPE--EREKRHWHNFTHVTTHTAQEWAE 553 (937)
Q Consensus 520 aI~~aL~m~~~--er~~r~~~~~~~V~~~~~~~W~~ 553 (937)
++..++..+.. +..+....+++++.+.....-+.
T Consensus 337 ~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA 372 (381)
T COG0763 337 ALEELLLNGDRREALKEKFRELHQYLREDPASEIAA 372 (381)
T ss_pred HHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 99999987621 22233445555555542333333
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.027 Score=55.86 Aligned_cols=92 Identities=16% Similarity=0.241 Sum_probs=47.7
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCcc-----chHHHHh-hhcCCEEEEeCHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS-----RSDLLRA-VLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~-----r~eil~~-ll~aDlIgF~t~~~~~~Fl~ 304 (937)
+.|+||+|.++...+...... +.|+.+++|.+++.........+ ...+... .-.+|.|...+...++.+.+
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~ 156 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK 156 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH
Confidence 569999999887765544333 89999999998742111111111 1111112 34688888777655554433
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhh
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 341 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~ 341 (937)
.|. ...++.++|+|||.+.|.
T Consensus 157 -----~~~-----------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 157 -----FGI-----------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp -----HT-------------SS-EEE----B-CCCH-
T ss_pred -----hCC-----------cccCCEEEECCccHHHcC
Confidence 221 247899999999999884
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.02 Score=56.66 Aligned_cols=69 Identities=19% Similarity=0.363 Sum_probs=43.8
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+.||+++|.||||++-.---+.-+..++. .+-.---.|+.|.+ .|++|+|+|||.-.-+++....+++
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~Ka----Fnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKA----FNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeee----eeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 467999999999999842100000111111 11112234555554 4999999999999999988887654
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.054 Score=54.36 Aligned_cols=68 Identities=16% Similarity=0.157 Sum_probs=58.0
Q ss_pred HHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceE
Q 002314 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWL 664 (937)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~l 664 (937)
...+...+-|++|+|.||++.. ....+|++++-+..+.. .|..|+|+|--+..-+..+...+++.+
T Consensus 22 ~L~~~Gikgvi~DlDNTLv~wd-------------~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 22 ILKAHGIKGVILDLDNTLVPWD-------------NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred HHHHcCCcEEEEeccCceeccc-------------CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 3456788999999999999983 34578999999999987 699999999999999999988888776
Q ss_pred Ee
Q 002314 665 AA 666 (937)
Q Consensus 665 ia 666 (937)
|.
T Consensus 88 i~ 89 (175)
T COG2179 88 IY 89 (175)
T ss_pred ee
Confidence 54
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.43 E-value=1.3 Score=51.14 Aligned_cols=235 Identities=19% Similarity=0.212 Sum_probs=124.1
Q ss_pred CCCCEEEEeCcccc--hHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 230 ~~~DvVwvHDyhl~--llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
+++|+|..=||.=+ .+.+.+|++.+..||.++. ++.+|.==++|-..++.. +|.+.-.. .+-..|...
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~if-PFE~~~y~~-- 150 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLVIF-PFEPEFYKK-- 150 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeECC-cccHHHHhc--
Confidence 35688888887744 6788999998888888764 234544334554444442 23321111 111122210
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCcEE-EEE-ecccccCCH-HHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVM-LGV-DRLDMIKGI-PQKL 382 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iI-L~V-dRld~~KGi-~~~l 382 (937)
.|++ +.|-|+ +=+|. ... ... ....++.+ .++++| |.- +|-...|-+ +..+
T Consensus 151 --~g~~-----~~~VGH--------Pl~d~--~~~---~~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 151 --HGVP-----VTYVGH--------PLLDE--VKP---EPD----RAEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred --cCCC-----eEEECC--------cchhh--hcc---CCC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 0100 112222 11221 111 010 11122222 344443 333 477655554 8889
Q ss_pred HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002314 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (937)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (937)
+|.+++.+++|+++ +++...+. . ..+.+++.....+.. .++... ..+...+++.||+
T Consensus 207 ~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~ 263 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII-----EGESYDAMAAADA 263 (373)
T ss_pred HHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcc
Confidence 99999999999875 44333221 1 122233333222211 123322 2456778999999
Q ss_pred EEECCCCcCCChhHHHHHHhcCCCCceEEEe-----------------CCCCccccc-CCce---EEECCCCHHHHHHHH
Q 002314 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILS-----------------EFAGAAQSL-GAGA---ILVNPWNITEVANAI 521 (937)
Q Consensus 463 ~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS-----------------e~aG~~~~l-g~~g---llVnP~D~~~lA~aI 521 (937)
.+++| |.+.+|++..+ .|.|+. .+.|....+ |... ++-+-.+++.+++++
T Consensus 264 al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 264 ALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred hhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 99999 79999999885 444443 333333333 2111 222456889999999
Q ss_pred HHHHcCCHH
Q 002314 522 ARALNMSPE 530 (937)
Q Consensus 522 ~~aL~m~~~ 530 (937)
..+|.++..
T Consensus 335 ~~ll~~~~~ 343 (373)
T PF02684_consen 335 LELLENPEK 343 (373)
T ss_pred HHHhcCHHH
Confidence 999987643
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.023 Score=57.82 Aligned_cols=56 Identities=14% Similarity=0.232 Sum_probs=37.7
Q ss_pred CCeEEEEecCcccCCCCC-CCCCCCccccccccC-CChhHHHHHHHhhcCCCCeEEEEcCCCh
Q 002314 590 NNRLLILGFNATLTEPVD-TPGRRGDQIREMELK-LHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~-~P~~~~~~~~~~~~~-~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 650 (937)
+.|+++||+||||+.... .+ .-+.+ .+-+ +-+.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~---~~~~~-~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV---FPTSA-SDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc---ccCCh-HHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 458899999999997421 00 00001 1112 34789999999986 5999999997554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.018 Score=59.02 Aligned_cols=51 Identities=10% Similarity=0.130 Sum_probs=38.1
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
+++|||.||||+...+-. + ...+..+-|.+.++|++|.+ .|.+++|+|.-+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~-----~-~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV-----H-EIDNFEFIDGVIDALRELKK-MGYALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCC-----C-CHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 789999999999532211 0 00355677899999999987 589999999764
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.069 Score=54.49 Aligned_cols=61 Identities=13% Similarity=0.173 Sum_probs=46.7
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC-hhhHHHHhcccCc
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQEYNL 662 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~~~~~~l 662 (937)
....+++++|+||||+... ...+.+.+.++|+.|.+ .+..++|+|+.+ ...+..++..+++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~-------------~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD-------------HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred HCCCCEEEEecCCccccCC-------------CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3567999999999999763 23567899999999986 589999999998 4555555444443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.034 Score=55.22 Aligned_cols=53 Identities=19% Similarity=0.187 Sum_probs=38.5
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
+++|||+||||++..... ..+. .....+-|.+.++|+.|.+ .|..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~---~~~~-~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD---YPRS-LDDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcc---cCCC-HHHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 478999999999874210 0111 1234567899999999987 599999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.065 Score=57.71 Aligned_cols=71 Identities=10% Similarity=0.012 Sum_probs=47.8
Q ss_pred cchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcc---------c------------cccccCCChhHHHHHHHhh
Q 002314 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQ---------I------------REMELKLHPDLKQPLNALC 635 (937)
Q Consensus 577 L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~---------~------------~~~~~~~~~~~~~~L~~L~ 635 (937)
..++++.+.....+...|.||+|||+++..+-.-. +.+ + ......+-+.++++|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~-~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWR-GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchhee-eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 35677777665555568999999999975321100 000 0 0123455667999999997
Q ss_pred cCCCCeEEEEcCCC
Q 002314 636 HDPKTTIVVLSGSD 649 (937)
Q Consensus 636 ~d~g~~V~IvSGR~ 649 (937)
+ .|..+++||||+
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 6 599999999996
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=94.82 E-value=3.3 Score=47.57 Aligned_cols=72 Identities=22% Similarity=0.167 Sum_probs=51.5
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc---CCceEEECCCCHHHH
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEV 517 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l---g~~gllVnP~D~~~l 517 (937)
|. +.+.++..++.+|++.||++|-.|. =++ .||.+.+ .|+| + .|-.++. |.+.++| +.|.+++
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg----~Pvv-~--l~~R~e~~~~g~nvl~v-g~~~~~I 329 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFG----VPTI-N--IGTRQKGRLRADSVIDV-DPDKEEI 329 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcC----CCEE-e--ecCCchhhhhcCeEEEe-CCCHHHH
Confidence 54 5789999999999999999995442 122 7999984 3333 2 2334443 5566778 6789999
Q ss_pred HHHHHHHHc
Q 002314 518 ANAIARALN 526 (937)
Q Consensus 518 A~aI~~aL~ 526 (937)
.+++.++++
T Consensus 330 ~~a~~~~~~ 338 (365)
T TIGR03568 330 VKAIEKLLD 338 (365)
T ss_pred HHHHHHHhC
Confidence 999999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.1 Score=55.39 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
-..+..+++.++ .+++.+++||| ..+|..|=+.++
T Consensus 148 P~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~aA~~Ag 182 (220)
T COG0546 148 PEPLLLLLEKLG------LDPEEALMVGD-SLNDILAAKAAG 182 (220)
T ss_pred HHHHHHHHHHhC------CChhheEEECC-CHHHHHHHHHcC
Confidence 345667788887 33579999999 999999988886
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=94.47 E-value=3.2 Score=46.81 Aligned_cols=168 Identities=19% Similarity=0.198 Sum_probs=101.6
Q ss_pred eEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEe-cccccCCHHHHHHHHHHhHHhCcCccCcEEEEEE
Q 002314 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404 (937)
Q Consensus 326 ~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~Vd-Rld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi 404 (937)
..+-.+|.-+|+..-.... .....+++-+-|| .-|++-+..+.|+++..... .+ +.++ +
T Consensus 160 ~~~lyfPt~m~~~~~~~~~-------------~~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~--~~----~kIi-v 219 (360)
T PF07429_consen 160 ASLLYFPTRMDPALTLSEK-------------NKKNKGKLTILVGNSGDPSNNHIEALEALKQQFG--DD----VKII-V 219 (360)
T ss_pred ceEEEcCCCCchhhhcccc-------------ccCCCCceEEEEcCCCCCCccHHHHHHHHHHhcC--CC----eEEE-E
Confidence 3466788877765322110 0111223333344 56888888888877765432 12 2222 1
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-cCCChhHHHHHHhc
Q 002314 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQ 483 (937)
Q Consensus 405 ~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~-EG~nLv~~EamAc~ 483 (937)
|- +.+...+++.++|.+...++ ||.. .+..+...++.+|+.++++.||++++...| .|||..++ .+.+
T Consensus 220 --PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~- 288 (360)
T PF07429_consen 220 --PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL- 288 (360)
T ss_pred --EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-
Confidence 21 11112345667777766554 4432 345568899999999999999999999975 79998654 2444
Q ss_pred CCCCceEEEeCCCCcccccCCceEEE----CCCCHHHHHHHHHHHHcC
Q 002314 484 DLKKGVLILSEFAGAAQSLGAGAILV----NPWNITEVANAIARALNM 527 (937)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~gllV----nP~D~~~lA~aI~~aL~m 527 (937)
+.++++|+-.-....+.+-++.| +.-|...+++|=+++...
T Consensus 289 ---G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~ 333 (360)
T PF07429_consen 289 ---GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANV 333 (360)
T ss_pred ---CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhC
Confidence 47999998887777773334433 455666666665555543
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.068 Score=54.15 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=38.4
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 648 (937)
+++|||.||||..... .....+.+ ....+-+.+.++|++|.+ .|..++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~--~~~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP--SDFQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCC--CccccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 6899999999997432 11111222 245677899999999987 58999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.076 Score=51.64 Aligned_cols=84 Identities=18% Similarity=0.130 Sum_probs=44.2
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHH-----HHhhhcCCEEEEeCHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-----LRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~ei-----l~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
.+.|+|++|+++..+++.++++. .++|+.+.+|..+.... .++...+ -..+-.||.|...+...++.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877777777733 48999999997543211 1111112 23444689999888877666554
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecc
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 334 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~G 334 (937)
.| ....+|.++|||
T Consensus 147 -----~g-----------~~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YG-----------VPPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hC-----------CCCCcEEEeCcC
Confidence 12 234688899987
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=94.03 E-value=1.4 Score=52.09 Aligned_cols=203 Identities=13% Similarity=0.120 Sum_probs=100.8
Q ss_pred EEecccChhhhhhhhcCC-chHH-HHHHHHHHhc---CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEE
Q 002314 330 AFPIGIDSERFIRALEIN-PVQV-HIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404 (937)
Q Consensus 330 v~P~GID~~~f~~~~~~~-~~~~-~~~~lr~~~~---~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi 404 (937)
++-||.-.......+... ++.. .+-.-|+.|+ +..++.+..+ ..|=-+..++.+.++|+.-|+.+ |++.
T Consensus 247 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~----L~L~ 320 (468)
T PF13844_consen 247 VVQNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNN--LFKISPETLDLWARILKAVPNSR----LWLL 320 (468)
T ss_dssp EEEECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S---GGG--HHHHHHHHHHHHHSTTEE----EEEE
T ss_pred EeecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCc--cccCCHHHHHHHHHHHHhCCCcE----EEEe
Confidence 346777766555433221 1110 0011244552 4444445555 45667899999999999999865 6555
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcC
Q 002314 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 484 (937)
Q Consensus 405 ~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~ 484 (937)
..+. ... +.+++...+ .|.. -..|+| .+..+.++..+.|+.+||+|-|..+-| +.+.+||+.+
T Consensus 321 ~~~~--~~~------~~l~~~~~~----~Gv~-~~Ri~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm-- 383 (468)
T PF13844_consen 321 RFPA--SGE------ARLRRRFAA----HGVD-PDRIIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM-- 383 (468)
T ss_dssp ETST--THH------HHHHHHHHH----TTS--GGGEEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH--
T ss_pred eCCH--HHH------HHHHHHHHH----cCCC-hhhEEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc--
Confidence 5442 111 233333333 2322 235775 566788999999999999999987777 4667999998
Q ss_pred CCCceEEEeCCCCc-c-----ccc---CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh---hcCCHHHHH
Q 002314 485 LKKGVLILSEFAGA-A-----QSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV---TTHTAQEWA 552 (937)
Q Consensus 485 ~~~g~lVlSe~aG~-~-----~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V---~~~~~~~W~ 552 (937)
|++|+|--+-. + ..| |-.-++. .|.++..+.-.++.+++ +.++...++.++.+ --++...|+
T Consensus 384 ---GVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA--~s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~a 457 (468)
T PF13844_consen 384 ---GVPVVTLPGETMASRVGASILRALGLPELIA--DSEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFA 457 (468)
T ss_dssp ---T--EEB---SSGGGSHHHHHHHHHT-GGGB---SSHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHH
T ss_pred ---CCCEEeccCCCchhHHHHHHHHHcCCchhcC--CCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHH
Confidence 77787732211 1 111 3222222 35555555444444543 34444444444443 226788888
Q ss_pred HHHHHHHHH
Q 002314 553 ETFVSELND 561 (937)
Q Consensus 553 ~~fl~~l~~ 561 (937)
++|-..+..
T Consensus 458 r~lE~a~~~ 466 (468)
T PF13844_consen 458 RNLEAAYRQ 466 (468)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877666554
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.058 Score=54.56 Aligned_cols=53 Identities=15% Similarity=0.260 Sum_probs=33.2
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 647 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG 647 (937)
|+.+||+||||+.... +..-.+-+.+-.-.++.+.++|++|.+ .|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeC
Confidence 5789999999996521 000001111223456789999999987 5999999884
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.1 Score=53.65 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=39.4
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
.|+++||.||||...... ...... ...+-|.+.++|++|.+ .|..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~---~~~~~~--~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG---YVKSPD--EWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCcc---ccCCHH--HeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 589999999999755321 122222 34567899999999987 589999999876
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.18 Score=51.35 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=48.3
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-eEEEEcCCC-------hhhHHHHh
Q 002314 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSD-------RNVLDKNF 657 (937)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~IvSGR~-------~~~L~~~~ 657 (937)
.++...|.|+||.|.||++.. ...++++..+.++++.+.-+. .|+|+|-.. ...++.+-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~-------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY-------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC-------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 566889999999999999873 456899999999999875332 599999863 44454444
Q ss_pred cccCce
Q 002314 658 QEYNLW 663 (937)
Q Consensus 658 ~~~~l~ 663 (937)
..+++.
T Consensus 103 ~~lgIp 108 (168)
T PF09419_consen 103 KALGIP 108 (168)
T ss_pred HhhCCc
Confidence 444544
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.068 Score=49.77 Aligned_cols=54 Identities=15% Similarity=0.260 Sum_probs=38.3
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCh---hhHHHHhcccCce
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKNFQEYNLW 663 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~~~~~~~~l~ 663 (937)
|+||+||||... ..+-|.+.++|++|.+ .|..++++|-.+. ..+.+.+..+++.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999964 2355788999999987 4899999987654 4444445444444
|
... |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.2 Score=52.54 Aligned_cols=70 Identities=16% Similarity=0.182 Sum_probs=49.7
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCC----CCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChh
Q 002314 578 READSIERYLRSNNRLLILGFNATLTEPV----DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (937)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~----~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 651 (937)
..+.+.+.++....|+|++|+|-||++.. .+|. .........++|+.+..+.+|.+ .+..|+|||=.+..
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchh
Confidence 35567778889999999999999999821 1110 00011223478999999999986 59999999966543
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.12 Score=57.30 Aligned_cols=67 Identities=19% Similarity=0.192 Sum_probs=49.2
Q ss_pred CCeEEEEecCcccCCCCCC-CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 590 NNRLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~-P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
+.+++++|+||||...... | .+.....+..+.+.+.++|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSP---YDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCc---cchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 4578999999999986431 0 001111245678899999999987 59999999999998887666554
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.14 Score=58.34 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=40.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 648 (937)
+++++|||.||||....... ...+.+ ....+-|.+.+.|..|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~~-~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDSL-DKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccCc-ccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 46899999999999863210 011111 346788999999999975 68999999984
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.11 Score=53.30 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=39.2
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
+..|+|++|-||||.....-. . .....+-|.+.++|++|.+ .|..++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~------~-~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH------Y-PGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC------C-HHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 357999999999997552100 0 0244567899999999987 589999999854
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.14 Score=55.13 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=42.1
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH--HHhcccC
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEYN 661 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~--~~~~~~~ 661 (937)
+.++++||+||||... ..+-|.+.++|++|.+ .|..++|+|..+....+ +.+..++
T Consensus 7 ~~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred cCCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 4578999999999965 2356899999999987 59999999876654333 4555443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.6 Score=56.80 Aligned_cols=67 Identities=16% Similarity=0.322 Sum_probs=51.9
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCC-CeEEEEcCCChhhHHHHhcccCc
Q 002314 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK-TTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 584 ~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g-~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
+.+.....+.+++..||+++.... ....+-|++.++|++|.+ .| ..++|+||.+....+.....+++
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 345566678899999998876421 234577899999999986 47 99999999999988887776544
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.31 Score=49.84 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=30.3
Q ss_pred hhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
+++.+.|+.+.+ .+..|+|+||-....++.++..+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 577899999876 4999999999988888888765544
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=92.88 E-value=21 Score=40.80 Aligned_cols=243 Identities=15% Similarity=0.114 Sum_probs=117.5
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhh--cCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll--~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
.+|+|.||.=-.-.+...+.....++||++. |-=--+.|.. .|.-+|+.|-+. -||+-.--+..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 4589999875555555555555568888763 3211111211 123334433332 356666666666666554
Q ss_pred HhCcccCCCceeeCCeeeEEEEE-ecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEE-EEecccc---cCCHHHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVML-GVDRLDM---IKGIPQKLL 383 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~-P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL-~VdRld~---~KGi~~~l~ 383 (937)
.|.+ ..+|.++ ..++|.-........+... ...+... ..++++| ..=|... .......+.
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~ 204 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKYK--NSGILQD-APKPYILVTLHPVTNEDNPERLEQILE 204 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-HH--HHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhhh--hHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHH
Confidence 2321 2233333 3456643222111111110 1122112 3444444 4434433 344667778
Q ss_pred HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002314 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (937)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (937)
+++.+.+. +++ .+|....++ + .....+.+...+++ .+++ ...++..++..+++.|+++
T Consensus 205 ~l~~L~~~-~~~----~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~~-~~~l~~~~~l~ll~~a~~v 262 (346)
T PF02350_consen 205 ALKALAER-QNV----PVIFPLHNN----P---RGSDIIIEKLKKYD---------NVRL-IEPLGYEEYLSLLKNADLV 262 (346)
T ss_dssp HHHHHHHH-TTE----EEEEE--S-----H---HHHHHHHHHHTT-T---------TEEE-E----HHHHHHHHHHESEE
T ss_pred HHHHHHhc-CCC----cEEEEecCC----c---hHHHHHHHHhcccC---------CEEE-ECCCCHHHHHHHHhcceEE
Confidence 88887776 443 344343211 2 22333333332221 3554 5789999999999999999
Q ss_pred EECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcC
Q 002314 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 527 (937)
Q Consensus 464 vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m 527 (937)
|--|- |+ ..||.+++ .|+|.=...|-.++. ....++|. .|.+++.++|.+++..
T Consensus 263 vgdSs----GI-~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 263 VGDSS----GI-QEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EESSH----HH-HHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EEcCc----cH-HHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 87773 22 34999984 455555556666664 23455576 7999999999999975
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=92.45 E-value=0.14 Score=54.78 Aligned_cols=70 Identities=14% Similarity=0.061 Sum_probs=47.5
Q ss_pred CCeEEEEecCcccCCCCCCCC--CCC----------ccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhh---HH
Q 002314 590 NNRLLILGFNATLTEPVDTPG--RRG----------DQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LD 654 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~--~~~----------~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~---L~ 654 (937)
.+-+++||+|-|+++..+--. ..+ .-+.+..+..-|.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 457899999999998542000 000 01122456677899999999987 699999999999655 44
Q ss_pred HHhccc
Q 002314 655 KNFQEY 660 (937)
Q Consensus 655 ~~~~~~ 660 (937)
+++...
T Consensus 155 ~nL~~~ 160 (229)
T TIGR01675 155 DNLINA 160 (229)
T ss_pred HHHHHc
Confidence 555443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.22 Score=59.69 Aligned_cols=58 Identities=10% Similarity=0.206 Sum_probs=39.8
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccc-CCChhHHHHHHHhhcCCCCeEEEEcCCCh
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~-~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 650 (937)
...|++|||+||||..... +.....-+ .+- .+-|.+.+.|++|.+ .|..++|+|..+-
T Consensus 166 ~~~Kia~fD~DGTLi~t~s--g~~~~~~~-~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKS--GKVFPKGP-DDWQIIFPEIPEKLKELEA-DGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCC--CccCCCCH-HHeeecccCHHHHHHHHHH-CCCEEEEEECCcc
Confidence 4568999999999996421 00000001 222 257899999999987 5999999998655
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.18 Score=54.22 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.5
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhcc
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 659 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~ 659 (937)
++||+||||.+.. .+-+.+.++|+.|.+ .+.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~---------------~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH---------------KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5789999999863 134588999999986 588999998 9999988777666
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.16 Score=53.70 Aligned_cols=38 Identities=3% Similarity=-0.258 Sum_probs=32.7
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-+...++.+++.++ .+++.+++||| ..+|.++-+.++-
T Consensus 149 p~~~~~~~~~~~~~------~~~~~~~~igD-s~~Di~aA~~aG~ 186 (222)
T PRK10826 149 PHPEVYLNCAAKLG------VDPLTCVALED-SFNGMIAAKAARM 186 (222)
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEEcC-ChhhHHHHHHcCC
Confidence 35568899999998 56899999999 9999999998875
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.07 E-value=0.17 Score=55.50 Aligned_cols=73 Identities=12% Similarity=0.169 Sum_probs=47.7
Q ss_pred cCCeEEEEecCcccCCCCCCC-----CCC-C--cc----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH--
Q 002314 589 SNNRLLILGFNATLTEPVDTP-----GRR-G--DQ----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD-- 654 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P-----~~~-~--~~----~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~-- 654 (937)
.++.+|+||+|+|+++..+-- ... . .. .......+-|.+.+.|+.|.+ .|..++++|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 456799999999999764210 000 0 00 111234566889999999987 59999999999855443
Q ss_pred -HHhcccCc
Q 002314 655 -KNFQEYNL 662 (937)
Q Consensus 655 -~~~~~~~l 662 (937)
.++...++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55555444
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=91.91 E-value=14 Score=42.53 Aligned_cols=72 Identities=14% Similarity=0.148 Sum_probs=47.9
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCc----cccc--CCceEEECCC--CHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL--GAGAILVNPW--NIT 515 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~----~~~l--g~~gllVnP~--D~~ 515 (937)
+.++++..+ +|..||++| .+-|+| +..|+++++ .|+|+--..+= +..+ ...|+.+++. +.+
T Consensus 292 ~~~~~p~~~---ll~~~d~~I---~hgG~~-t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHDW---LLPRCAAVV---HHGGAG-TTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHHH---Hhhhhheee---ecCCch-hHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 456677554 578899999 456764 569999994 56666544431 2122 1235555554 689
Q ss_pred HHHHHHHHHHc
Q 002314 516 EVANAIARALN 526 (937)
Q Consensus 516 ~lA~aI~~aL~ 526 (937)
+++++|.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.35 Score=48.13 Aligned_cols=70 Identities=17% Similarity=0.233 Sum_probs=48.7
Q ss_pred CCeEEEEecCcccCCCCC--CCCCC-Ccc-c--------cccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHh
Q 002314 590 NNRLLILGFNATLTEPVD--TPGRR-GDQ-I--------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~--~P~~~-~~~-~--------~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~ 657 (937)
++.++++|+||||+.... .++.. ..+ + ......+-|.+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 357899999999998632 11110 100 0 01233567899999999974 6999999999999988877
Q ss_pred cccC
Q 002314 658 QEYN 661 (937)
Q Consensus 658 ~~~~ 661 (937)
..++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 6653
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=91.73 E-value=6.8 Score=44.58 Aligned_cols=195 Identities=14% Similarity=0.157 Sum_probs=103.2
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHh
Q 002314 578 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (937)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~ 657 (937)
|+.++..--...+-+|+-||=|+||-++.. .-..+..++.-|-+|-+ .|..|+|||.=.+...+++.
T Consensus 134 N~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 134 NTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred HHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 444444433344779999999999999853 12234455555556655 49999999988876655443
Q ss_pred ccc-------------------Cc-eEEeeCceEEEec-----------CCeeeeccccccChhHHH-HHHH-------H
Q 002314 658 QEY-------------------NL-WLAAENGMFLRCT-----------TGKWMTTMPEHLNMEWVD-SLKH-------V 698 (937)
Q Consensus 658 ~~~-------------------~l-~liaenG~~ir~~-----------~~~w~~~~~~~~~~~w~~-~v~~-------i 698 (937)
..+ ++ .+-||.-+.++.. .+.|... .-..|.+ .+.+ .
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~----~m~~W~~~dI~~lLD~AE~~ 276 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP----EMKTWSEEDITELLDIAEAA 276 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc----cccCcCHHHHHHHHHHHHHH
Confidence 321 11 2344444445432 1245321 1123322 2333 3
Q ss_pred HHHHHhc--CCCceeeeecceEEEEeeccChhhhHHHHHH----HHHHHhcCC--CCCCCeEEEEcCe--EEEEEECCCC
Q 002314 699 FEYFTER--TPRSHFEQRETSLVWNYKYADVEFGRIQARD----MLQHLWTGP--ISNASVEVVQGSK--SVEVRAVGVT 768 (937)
Q Consensus 699 l~~~~~~--~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~e----l~~~L~~~~--~~~~~v~v~~Gk~--~vEV~p~gvn 768 (937)
++....+ .| ..|-.|+-++-+--.. ...+...+.+| +...| +.. ...-++....|.. +|+| -|
T Consensus 277 L~~~~~~l~Lp-a~IiRK~RAVGivP~~-~~ki~rE~LEE~VL~vq~~L-~~~~~~~~ipfCAFNGGsDVwVDI----Gd 349 (408)
T PF06437_consen 277 LRDCVKRLNLP-ATIIRKERAVGIVPKP-GVKIIREQLEEIVLTVQKTL-EESPPGRRIPFCAFNGGSDVWVDI----GD 349 (408)
T ss_pred HHHHHHHcCCC-eeEEeecceeeEecCC-CCcchhhhHHHHHHHHHHHH-HhcCCCCCCceeeecCCcceEEEc----CC
Confidence 3333322 34 4455666555443211 11111122222 23333 221 1223566666643 5555 37
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
|.-+|+.+.+.+. ..+.+.+.+++-+||
T Consensus 350 Ks~GV~~lQ~y~~--~~~~i~~~~tLHVGD 377 (408)
T PF06437_consen 350 KSLGVRALQKYFD--PEGGIKPSETLHVGD 377 (408)
T ss_pred cHHhHHHHHHHHH--hccCCCccceeeehh
Confidence 9999999999882 112267899999999
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.33 Score=53.52 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
..++..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 198 ~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~aA~~AG 232 (273)
T PRK13225 198 RRALSQLVAREG------WQPAAVMYVGD-ETRDVEAARQVG 232 (273)
T ss_pred HHHHHHHHHHhC------cChhHEEEECC-CHHHHHHHHHCC
Confidence 356788888887 45789999999 888877666553
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.16 Score=53.74 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=25.4
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
..+.|.+.+.|+.|.+ .|..++|+||.....++.++..
T Consensus 73 ~~l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~ 110 (219)
T PRK09552 73 AEIREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQG 110 (219)
T ss_pred CCcCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHH
Confidence 3456667777777665 4777777777776666666655
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=91.35 E-value=0.13 Score=52.00 Aligned_cols=41 Identities=17% Similarity=0.312 Sum_probs=35.4
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
.+.+.+|+.+++.+++..+ ++.+.+++||| +.||.+|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHHHhcC
Confidence 4567899999999998876 46788999999 99999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.19 E-value=0.35 Score=50.32 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=24.1
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
+-|.+.+.|..|.+ . ..++|+||.....++.++..+
T Consensus 69 ~~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 69 PLPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 45667777777765 3 677777777777776666553
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=91.08 E-value=0.32 Score=51.09 Aligned_cols=37 Identities=11% Similarity=-0.037 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|...+++++++++ .+++.+++||| ..+|..+-+.++-
T Consensus 140 ~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~aa~~aG~ 176 (214)
T PRK13288 140 DPEPVLKALELLG------AKPEEALMVGD-NHHDILAGKNAGT 176 (214)
T ss_pred CcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 4456667888877 45789999999 9999988877753
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=90.99 E-value=6.6 Score=45.71 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=77.7
Q ss_pred EEEEec-ccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhc---------ccCC
Q 002314 366 MLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING---------RFGT 435 (937)
Q Consensus 366 IL~VdR-ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~---------~~g~ 435 (937)
|+.-.| =+-.++++.+++|++.+.++ |+ +.++....+. .++..+++.+.+. .++. .|..
T Consensus 210 lLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~ 278 (396)
T TIGR03492 210 LLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQK 278 (396)
T ss_pred EECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhcc
Confidence 344556 45667889999999998655 54 3354443232 1223333332211 0100 0000
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCc------ccc---cCCce
Q 002314 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA------AQS---LGAGA 506 (937)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~------~~~---lg~~g 506 (937)
..+.++ ....+...+|+.||++|..| |.+..|+++++ .|.|+--+.+- .+. +-..+
T Consensus 279 ---~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~ 343 (396)
T TIGR03492 279 ---GTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGS 343 (396)
T ss_pred ---CceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCE
Confidence 012221 12367899999999999986 35669999985 45555432121 111 10245
Q ss_pred EEECCCCHHHHHHHHHHHHcCC
Q 002314 507 ILVNPWNITEVANAIARALNMS 528 (937)
Q Consensus 507 llVnP~D~~~lA~aI~~aL~m~ 528 (937)
+.+...+.+.++++|.++|+++
T Consensus 344 ~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 344 VFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred EecCCCCHHHHHHHHHHHHcCH
Confidence 5555678899999999999864
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=90.95 E-value=0.52 Score=48.41 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=48.9
Q ss_pred CeEEEEecCcccCCCCCC-----CCCCCcccc-------ccccCCChhHHHHHHHhhcCCCCeEEEEcCC-ChhhHHHHh
Q 002314 591 NRLLILGFNATLTEPVDT-----PGRRGDQIR-------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNF 657 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~-----P~~~~~~~~-------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~~ 657 (937)
.||++||.|+||.+.... |.+..++.. .....+-|.+.++|+.|.+ .|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 479999999999975421 111111111 1234567899999999987 59999999998 777777766
Q ss_pred cccC
Q 002314 658 QEYN 661 (937)
Q Consensus 658 ~~~~ 661 (937)
..++
T Consensus 81 ~~~~ 84 (174)
T TIGR01685 81 GTFE 84 (174)
T ss_pred HhCC
Confidence 6544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.59 E-value=0.16 Score=50.54 Aligned_cols=39 Identities=21% Similarity=0.092 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-+|-.|.+.|+++++ +.++++.|+|| |.+|.++|+.++-
T Consensus 82 ~dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpvm~~vGl 120 (170)
T COG1778 82 SDKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPVMEKVGL 120 (170)
T ss_pred HhHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHHHHHcCC
Confidence 389999999999998 56899999999 9999999999975
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=90.47 E-value=1.2 Score=53.98 Aligned_cols=63 Identities=16% Similarity=0.260 Sum_probs=47.3
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-eEEEEcCCChhhHHHHhcccCc
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~IvSGR~~~~L~~~~~~~~l 662 (937)
......+++-.||++..... ....+-+++.++|++|.+ .|. +++|+||.+....+...+.+++
T Consensus 339 ~~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 339 SAGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred hCCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 34456677777888775421 134567899999999987 588 9999999999888888776554
|
. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.39 E-value=22 Score=40.86 Aligned_cols=93 Identities=22% Similarity=0.216 Sum_probs=59.5
Q ss_pred HHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc--cc------c--CCceEEECCCC--HHHHH
Q 002314 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L--GAGAILVNPWN--ITEVA 518 (937)
Q Consensus 451 ~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~--~~------l--g~~gllVnP~D--~~~lA 518 (937)
+++.++|++||+++.=+= ++++.|..|++ .|.|+=-+...+ ++ | -..|+.+.-.+ .+.++
T Consensus 244 ~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 569999999999986442 57889999995 455554444441 22 2 12466666555 88999
Q ss_pred HHHHHHHcCCHHHHHHHHH-hhhhhhhcCCHHHHHH
Q 002314 519 NAIARALNMSPEEREKRHW-HNFTHVTTHTAQEWAE 553 (937)
Q Consensus 519 ~aI~~aL~m~~~er~~r~~-~~~~~V~~~~~~~W~~ 553 (937)
+.|.++++.+ |+.+.|. +.+..-.......-++
T Consensus 316 ~~i~~l~~~~--~~l~~m~~~a~~~~~p~aa~~i~~ 349 (357)
T COG0707 316 ELILRLLSNP--EKLKAMAENAKKLGKPDAAERIAD 349 (357)
T ss_pred HHHHHHhcCH--HHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999863 4444444 4444434444344333
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.76 E-value=0.81 Score=50.09 Aligned_cols=19 Identities=11% Similarity=0.094 Sum_probs=16.1
Q ss_pred hcCCeEEEEecCcccCCCC
Q 002314 588 RSNNRLLILGFNATLTEPV 606 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~ 606 (937)
....++|+|||||||++..
T Consensus 21 ~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred cCCceEEEEeCCCceeCCc
Confidence 4567899999999999873
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=89.74 E-value=0.04 Score=59.14 Aligned_cols=85 Identities=8% Similarity=0.096 Sum_probs=51.2
Q ss_pred cCCeEEEEecCcccCCCCCC------------CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002314 589 SNNRLLILGFNATLTEPVDT------------PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~------------P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 656 (937)
-+...++||+|+||++..+. |......+.......-|.+++.++.+.+ .|..|+++|||+-..-+.-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 45678999999999864211 0000000001122445568899999987 5999999999997754444
Q ss_pred hccc-CceEEeeCceEEEe
Q 002314 657 FQEY-NLWLAAENGMFLRC 674 (937)
Q Consensus 657 ~~~~-~l~liaenG~~ir~ 674 (937)
...+ ..|+.+-.+.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 4433 23333445566664
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=89.69 E-value=0.54 Score=47.48 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=33.7
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+.+.+.+.|+.|.+ .|..++|+||.....++.++..+++
T Consensus 73 ~~~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 73 ALRPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred CcCcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 456889999999876 5899999999999999988877654
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=88.95 E-value=0.52 Score=50.29 Aligned_cols=29 Identities=10% Similarity=-0.057 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHH
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDED 805 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEd 805 (937)
-.....++++++ .+++.+++||| ..+|..
T Consensus 152 p~~~~~~~~~~~------~~p~~~l~igD-s~~di~ 180 (224)
T PRK14988 152 QRLWQAVAEHTG------LKAERTLFIDD-SEPILD 180 (224)
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHH
Confidence 445677778777 46788999999 777643
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=88.73 E-value=31 Score=42.13 Aligned_cols=65 Identities=22% Similarity=0.241 Sum_probs=42.5
Q ss_pred HHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEe-------------------CCCCccccc-CCceE--EE--
Q 002314 454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-------------------EFAGAAQSL-GAGAI--LV-- 509 (937)
Q Consensus 454 ~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS-------------------e~aG~~~~l-g~~gl--lV-- 509 (937)
..++++||+++.+| |.+.+|++.++ .|.|+. .+.|....+ |..-+ ++
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g----~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqg 553 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQ----TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGG 553 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhC----CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCC
Confidence 68999999999999 79999999985 455543 222333223 22111 22
Q ss_pred -CCCCHHHHHHHHHHHHcCC
Q 002314 510 -NPWNITEVANAIARALNMS 528 (937)
Q Consensus 510 -nP~D~~~lA~aI~~aL~m~ 528 (937)
+-.+++.+|+++ +.|.++
T Consensus 554 Q~~~tpe~La~~l-~lL~d~ 572 (608)
T PRK01021 554 KKDFQPEEVAAAL-DILKTS 572 (608)
T ss_pred cccCCHHHHHHHH-HHhcCH
Confidence 345688888886 777655
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=88.32 E-value=0.7 Score=50.50 Aligned_cols=63 Identities=14% Similarity=0.156 Sum_probs=42.6
Q ss_pred CCeEEEEecCcccCCCCCCCC------------CCC-ccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhH
Q 002314 590 NNRLLILGFNATLTEPVDTPG------------RRG-DQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 653 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~------------~~~-~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 653 (937)
.+-+++||+|+|+++..+--. ... ..+....+..-|.+++..+.|.+ .|.+|+++|||+-..-
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r 175 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQ 175 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHH
Confidence 457899999999996432100 000 11112345667789999999986 6999999999986443
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=88.31 E-value=0.67 Score=46.65 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=38.7
Q ss_pred EEEEecCcccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhH
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 653 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 653 (937)
++++|+|||++...- .++-.+- ......+.+.++.+++++ .|..++-+|+|+....
T Consensus 1 VVvsDIDGTiT~SD~----~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa 57 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV----LGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQA 57 (157)
T ss_pred CEEEeccCCcCccch----hhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHH
Confidence 478999999997621 1110100 011567889999999986 6999999999997543
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=88.04 E-value=3 Score=53.41 Aligned_cols=69 Identities=14% Similarity=0.187 Sum_probs=49.1
Q ss_pred HHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 581 DSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 581 ~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
.....+.....+.+++-.||+++..-. ..-.+-+...++|++|.+ .|.+++++||......+.....+
T Consensus 620 ~~~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~l 687 (834)
T PRK10671 620 AEITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEA 687 (834)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHc
Confidence 334555666678888888998763211 112355778899999976 58999999999888887776654
Q ss_pred C
Q 002314 661 N 661 (937)
Q Consensus 661 ~ 661 (937)
+
T Consensus 688 g 688 (834)
T PRK10671 688 G 688 (834)
T ss_pred C
Confidence 4
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=88.01 E-value=3 Score=42.66 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=40.1
Q ss_pred cceEEEEeeccChhhhHHHHHHHHHHHhcCC-CCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceE
Q 002314 715 ETSLVWNYKYADVEFGRIQARDMLQHLWTGP-ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV 793 (937)
Q Consensus 715 ~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~-~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~v 793 (937)
+..++.--|...|+. |+++++.+ .-. .......+...-..+||.|. +|-.=.+.|.+..+ ++.+.+
T Consensus 61 gv~lavASRt~~P~~----A~~~L~~l-~i~~~~~~~~~~~~~F~~~eI~~g--sK~~Hf~~i~~~tg------I~y~eM 127 (169)
T PF12689_consen 61 GVKLAVASRTDEPDW----ARELLKLL-EIDDADGDGVPLIEYFDYLEIYPG--SKTTHFRRIHRKTG------IPYEEM 127 (169)
T ss_dssp T--EEEEE--S-HHH----HHHHHHHT-T-C----------CCECEEEESSS---HHHHHHHHHHHH---------GGGE
T ss_pred CCEEEEEECCCChHH----HHHHHHhc-CCCccccccccchhhcchhheecC--chHHHHHHHHHhcC------CChhHE
Confidence 344455445445554 46677666 211 01112222233346899885 99999999999988 789999
Q ss_pred EEEecCCCCcHH
Q 002314 794 LCIGHFLGKDED 805 (937)
Q Consensus 794 l~iGD~d~nDEd 805 (937)
++|=|+..|.++
T Consensus 128 lFFDDe~~N~~~ 139 (169)
T PF12689_consen 128 LFFDDESRNIEV 139 (169)
T ss_dssp EEEES-HHHHHH
T ss_pred EEecCchhccee
Confidence 999994444433
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=86.48 E-value=0.74 Score=48.58 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=31.4
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
..+.|.+.+.|+.|.+ .|..++|+||.....++.++..+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 4567788888988876 58999999999888888877654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=86.35 E-value=1.6 Score=49.21 Aligned_cols=63 Identities=22% Similarity=0.315 Sum_probs=47.1
Q ss_pred CeEEEEecCcccCCCC--CCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 591 NRLLILGFNATLTEPV--DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~--~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
.|+|++|+|+||..-+ ++ +..+ + ....+.+.+.+.|++|.+ .|..++|+|..+...+...|..
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~-g~~~--i--~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGED-GIDN--L--NLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred eEEEEEcCCCCCCCCEEccC-Cccc--c--ccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 5899999999999753 11 0000 0 011245789999999986 6999999999999999988876
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.28 E-value=1.3 Score=47.13 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=31.9
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
..+-+.+.++|..|.+ .+..++++|+.+...++..+...+
T Consensus 85 ~~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 85 LKPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 3567788899999986 468999999999888888776653
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=86.16 E-value=1 Score=45.89 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=30.2
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+.|..|+..++.+++.. ++.+++||| +.||..|-+.+.
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D~~aa~~~d 182 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTDVCPAKLSD 182 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-CcchhchHhcCC
Confidence 56778999888887642 467999999 999998877764
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=85.02 E-value=17 Score=41.85 Aligned_cols=99 Identities=11% Similarity=0.074 Sum_probs=59.9
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccc----cc--CCceEEECC--CCHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ----SL--GAGAILVNP--WNIT 515 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~----~l--g~~gllVnP--~D~~ 515 (937)
+.+++++. .++..||++|.. -|.| +..|+++++ .|+|+.-..+--. .+ ...|+.++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITH---GGMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 35777764 567899998854 4666 569999994 5666643332211 12 123555654 4678
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhhhhhhh-cCCHHHHHHHH
Q 002314 516 EVANAIARALNMSPEEREKRHWHNFTHVT-THTAQEWAETF 555 (937)
Q Consensus 516 ~lA~aI~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~f 555 (937)
+++++|.++|..+ +.+++.+.+.+.+. .......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999865 33444444444443 33455555433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.02 E-value=0.94 Score=46.71 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=38.8
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 648 (937)
.++||||-||||....++ ++.. ++-...+.++++|.+|.+ .+..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 579999999999865321 2221 455678899999999986 69999998853
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.84 E-value=16 Score=40.82 Aligned_cols=124 Identities=18% Similarity=0.175 Sum_probs=81.8
Q ss_pred cEEEEEe-cccccCCHHHHHHHHHHhHHhCcCccCcEEEEE-EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 002314 364 KVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (937)
Q Consensus 364 ~iIL~Vd-Rld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvq-i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (937)
++.+-|| .=|++-++.+.|+++.++... ++.++. .+.|+ ++ + ++.++|.+...+ .||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn-~---~Yi~~V~~~~~~---lF~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN-Q---AYIEEVRQAGLA---LFGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC-H---HHHHHHHHHHHH---hcCcc---cE
Confidence 3444444 668999999999988777543 233332 22232 22 3 456777766655 35532 45
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEE
Q 002314 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV 509 (937)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllV 509 (937)
..++..++.+|+.++++.+|+.++.-- ..|+|..++=.- . +.++++|+-.-.-..+-+-|+-|
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~-~----G~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQ-L----GKPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHH-C----CCcEEEecCCchHHHHHhCCCeE
Confidence 667899999999999999999999876 479998765432 2 46888887776666663344433
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=84.25 E-value=1.4 Score=50.76 Aligned_cols=18 Identities=11% Similarity=0.043 Sum_probs=15.4
Q ss_pred cCCeEEEEecCcccCCCC
Q 002314 589 SNNRLLILGFNATLTEPV 606 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~ 606 (937)
+..+.++||+||||++..
T Consensus 129 ~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred CCCCEEEEcCcCcceeCH
Confidence 467899999999999853
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=83.97 E-value=1.9 Score=48.72 Aligned_cols=50 Identities=14% Similarity=0.159 Sum_probs=35.6
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcC---CCCeEEEEc---CCChhhHHHHh
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD---PKTTIVVLS---GSDRNVLDKNF 657 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d---~g~~V~IvS---GR~~~~L~~~~ 657 (937)
.|+||+||||.... .+-+...++|+.|... -+..++++| |++...+.+.+
T Consensus 2 ~~ifD~DGvL~~g~---------------~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRGK---------------KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECCc---------------cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 58999999999752 2467899999999863 166666665 66666654433
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=83.87 E-value=1.1 Score=44.89 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=43.0
Q ss_pred eEEEEecCcccCCCCCCCCCCCcc-----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~-----~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
++++||+||||+.....+....+. .......+-|.+.+.|+.|+. ...|+|.|..+....+..+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 589999999999765432100000 011223456889999999965 6899999999988887777665
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=83.48 E-value=0.99 Score=46.52 Aligned_cols=39 Identities=18% Similarity=0.358 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-+|+.+++.+++.++ .+++.+++||| +.+|.+|++.++.
T Consensus 146 ~~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~a~~ag~ 184 (201)
T TIGR01491 146 DNKGEAVERLKRELN------PSLTETVAVGD-SKNDLPMFEVADI 184 (201)
T ss_pred ccHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHHHHhcCC
Confidence 479999999999887 46789999999 9999999999975
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=83.41 E-value=1.6 Score=45.91 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+.|.+.+.|+.|.+. ..++|+||-....++.++..+++
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHHcCC
Confidence 5778888888888763 48888998888888877776554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.72 E-value=1.4 Score=48.36 Aligned_cols=54 Identities=13% Similarity=0.252 Sum_probs=39.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC---hhhHHHHhcc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQE 659 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~---~~~L~~~~~~ 659 (937)
+...++||+||||..- ..+=|...++|++|.+ .|.+++++|-.+ ...+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 3467999999999964 2345789999999987 589999987654 4444444443
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=82.56 E-value=2.6 Score=42.50 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=51.2
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccc---------------------cccccCCChhHHHHHHHhhcCCCCeEEEEc
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQI---------------------REMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~---------------------~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS 646 (937)
..++..++||+|.||+.....|....... ......+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 35677899999999998765542111000 00123456799999999984 68999999
Q ss_pred CCChhhHHHHhcccC
Q 002314 647 GSDRNVLDKNFQEYN 661 (937)
Q Consensus 647 GR~~~~L~~~~~~~~ 661 (937)
..+..-.+..+..++
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999988888777763
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=82.25 E-value=37 Score=38.92 Aligned_cols=51 Identities=18% Similarity=0.223 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccc--hHHHHHHhhCCCCeEEEEE
Q 002314 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFL 262 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~--llp~~Lr~~~~~~~I~~fl 262 (937)
...|...-+.+-+.+.. .+++|+|..=||.=+ .+.+.+|+..|++|+.++.
T Consensus 57 l~~~~~~~~~~~~~~~~-~~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi 109 (347)
T PRK14089 57 LPKLFFAKKAIKEMVEL-AKQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYI 109 (347)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEE
Confidence 33444444444333222 356788888777633 4788999999999998865
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=81.74 E-value=9.9 Score=41.98 Aligned_cols=91 Identities=14% Similarity=0.118 Sum_probs=57.7
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (937)
.+++++..|-.|+.+.....++|+..+ .++++ +..|.++.. +.+ +++++++.. + + .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~----~~l~~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNL----DELKKFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCH----HHHHHHHHh-C---C-----CE
Confidence 357899999999988777888887654 22332 333443332 222 334444432 1 1 23
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
.. .+ ..+++..+|..||+++.. -|.++.|+++|+
T Consensus 227 ~~-~~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g 260 (279)
T TIGR03590 227 IL-FI--DVENMAELMNEADLAIGA-----AGSTSWERCCLG 260 (279)
T ss_pred EE-Ee--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcC
Confidence 32 23 347899999999999984 458999999995
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=81.68 E-value=2.9 Score=49.83 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=37.4
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc--eEEeeCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENG 669 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaenG 669 (937)
.+.+++.+.|+++.+ .|.+++|+|+.+...++.....+++ .++|.++
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 356899999999986 6999999999999999888877653 3555544
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=80.67 E-value=2.2 Score=49.41 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=29.9
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
.+-+.+.++|+.|.+ .+..++|+|+.+...+...+.
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 456778889999986 599999999999888876665
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.45 E-value=3.6 Score=43.27 Aligned_cols=37 Identities=11% Similarity=-0.027 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|..+++.++++++ .+++.+++||| ..+|.++.+.++-
T Consensus 151 ~~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~a~~~g~ 187 (226)
T PRK13222 151 DPAPLLLACEKLG------LDPEEMLFVGD-SRNDIQAARAAGC 187 (226)
T ss_pred ChHHHHHHHHHcC------CChhheEEECC-CHHHHHHHHHCCC
Confidence 5778999999988 46789999999 9999999988864
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=80.39 E-value=1.6 Score=45.24 Aligned_cols=41 Identities=20% Similarity=0.149 Sum_probs=35.7
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+-.|..+++.++++.+ ++.+.++++|| +.+|.+|++.++.
T Consensus 152 ~g~~K~~~l~~~~~~~~------~~~~~~~~~gD-s~~D~~~~~~a~~ 192 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQ------IDLKDSYAYGD-SISDLPLLSLVGH 192 (202)
T ss_pred CChHHHHHHHHHHHHcC------CCHHHcEeeeC-CcccHHHHHhCCC
Confidence 45679999999999877 45788999999 9999999999976
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 937 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 1e-65 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 1e-65 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 1e-63 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 3e-15 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 3e-15 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 1e-14 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 937 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 0.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 0.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 1e-25 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 2e-07 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 7e-06 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 7e-06 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 7e-05 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 2e-04 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 2e-04 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 693 bits (1791), Expect = 0.0
Identities = 160/495 (32%), Positives = 248/495 (50%), Gaps = 22/495 (4%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NR+ SAGGL +LG K W GW+G ++ K
Sbjct: 3 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLK 54
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ K L E + +YYN + N +LWP FHY RL + + +
Sbjct: 55 KVKKG--NITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 105
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N + AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI
Sbjct: 106 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 165
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP+ LL + DL+GF T + F+ + + G+ R +P
Sbjct: 166 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 225
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGI+ + + P+ + +L+ + + V+RLD KG+P++ LA+E LE+
Sbjct: 226 IGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 284
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++ D
Sbjct: 285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 344
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNP 511
L ++ +DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP
Sbjct: 345 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 403
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIK 571
++ EVA A+ RAL MS ER RH + + W E F+S+L V + +
Sbjct: 404 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQ 463
Query: 572 QVPPSLREADSIERY 586
+ + ++E +
Sbjct: 464 RDKVATFPKLALEHH 478
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 657 bits (1697), Expect = 0.0
Identities = 107/500 (21%), Positives = 187/500 (37%), Gaps = 28/500 (5%)
Query: 92 SRQRLLVVANRLPVSAIRRGED-SWSLEISAGGLVSALLGV-KEFEARWIGWAGVNV--- 146
+ + + + R ++ ++ GG + + WI A
Sbjct: 1 TGSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVLNISWIASADSEDDRR 60
Query: 147 PDEIGQKALTKALAEKRCIPVFL---DEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 203
+ +T L R I V L D + N N++W +Y + + +
Sbjct: 61 ASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYG-WDRWTQPSF 119
Query: 204 TRSFQSQFAAYIKANQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWF 261
+ +A + + + FAD + K V HDY L+ +P L+E D + F
Sbjct: 120 GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLF 179
Query: 262 LHTPFPSSEIHRTLPS--RSDLLRAVLAADLVGFHTYDYARHFVSACTRILG---FEGTP 316
+H P+PS++ R LP R+ +L +L A +GF + R+F+ + +L +
Sbjct: 180 VHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREA 239
Query: 317 EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376
VE +G TR+ P+G + ++E G ++++ R D IK
Sbjct: 240 MTVEWRGHRTRLRTMPLGYSPLTLDGR-----NPQLPEGIEEWADGHRLVVHSGRTDPIK 294
Query: 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436
+ + AF L K +L P R VP +V V N G+
Sbjct: 295 NAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS- 351
Query: 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496
+D D A + D+ + S DG NL ++E + + +ILSE
Sbjct: 352 ---DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNE-RDADVILSETC 407
Query: 497 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556
GAA+ LG VNP+++ E A AI+ AL P +R + T + W + +
Sbjct: 408 GAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQL 467
Query: 557 SELNDTVVEAQLRIKQVPPS 576
L ++ +
Sbjct: 468 DGLAADHAARTATAERFDTA 487
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-25
Identities = 27/216 (12%), Positives = 66/216 (30%), Gaps = 30/216 (13%)
Query: 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652
L+ L ++ TL + P ++ L ++ L + +++G
Sbjct: 3 LIFLDYDGTLVPIIMNP----EESY-----ADAGLLSLISDL--KERFDTYIVTGRSPEE 51
Query: 653 LDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE 712
+ + F ++ + +G + + + D + + P
Sbjct: 52 ISR-FLPLDINMICYHGACSKINGQIVYNNGSDRF-LGVFDRIYEDTRSWVSDFPGLRIY 109
Query: 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAA 772
++ +++++ + + + VE G +E+R GV KG+A
Sbjct: 110 RKNLAVLYHLGLMGAD----MKPKLRSRI-EEIARIFGVETYYGKMIIELRVPGVNKGSA 164
Query: 773 IDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 808
I + E + G DE +
Sbjct: 165 IRSVRGE-----------RPAIIAGDDAT-DEAAFE 188
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.0 bits (165), Expect = 1e-11
Identities = 72/484 (14%), Positives = 142/484 (29%), Gaps = 163/484 (33%)
Query: 2 PGNSYNSNSSNIP------PDRVTRLVREKIERDLRKSSRASHPN------DVTDNGGRE 49
S + +SSNI + RL++ K + N +V +
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSK-----------PYENCLLVLLNVQNAKAWN 260
Query: 50 VFEDEQRL----RDG---DNLGPSI---VDEDLEGPASTPNEGCERLDGRTFSRQRLLVV 99
F ++ R D L + + D TP+E + L + L
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV-KSL----LLKY-LDCR 314
Query: 100 ANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKAL 159
LP + +S +++ + ++ A W W VN LT +
Sbjct: 315 PQDLPREVLTTN----PRRLS---IIAESI--RDGLATWDNWKHVNC------DKLTTII 359
Query: 160 AEKRCIPVFLDEDIVHQYYNG--------------YCNNILWPLFHYLGLPQEDRLATTR 205
+ + V L+ + ++ ++W + + D
Sbjct: 360 --ESSLNV-LEPAEYRKMFDRLSVFPPSAHIPTILLS--LIW-----FDVIKSD----VM 405
Query: 206 SFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP 265
++ Y +V K K+ + +L K EY
Sbjct: 406 VVVNKLHKY--------SLVEKQPKES-TISIPSIYLELKVKLENEY------------- 443
Query: 266 FPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDY-----ARHFVSACTRILGFEGTPEGVE 320
+HR++ ++ + + DL+ + Y H +
Sbjct: 444 ----ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI--------------- 484
Query: 321 DQGRLTRVAAFP-IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIK-- 376
+ R+ F + +D RF+ K ++ A ++ L +
Sbjct: 485 EHPE--RMTLFRMVFLDF-RFLEQ----------KIRHDSTAWNASGSILNTLQQLKFYK 531
Query: 377 -------GIPQKLL-AFEKFL---EENSDWRGKVV-LLQIAVPTRTDVPEYQRLTSQVHE 424
++L+ A FL EEN K LL+IA+ + E + + + H+
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENL-ICSKYTDLLRIAL-----MAEDEAIFEEAHK 585
Query: 425 IVGR 428
V R
Sbjct: 586 QVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 4e-08
Identities = 82/622 (13%), Positives = 176/622 (28%), Gaps = 157/622 (25%)
Query: 218 NQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMK-VGWFLHTPFPSSEIHRTLP 276
+ M + Y+ D++ +F + + D K V + EI +
Sbjct: 5 HHMDFETGEHQYQYKDIL------SVFEDAFVDNF--DCKDVQDMPKSILSKEEIDHIIM 56
Query: 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRI-LGFEGTPEGVEDQGRLTRVAAF---- 331
S+ + + + + + FV RI F +P E + +
Sbjct: 57 SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 332 -PIGIDSERFI-----RALEINPVQVHIKELQETFAGRKVML-GVDRLDMIKGIPQKLLA 384
+ D++ F R ++ + EL+ + V++ G + G + +A
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP---AKNVLIDG-----V-LGSGKTWVA 167
Query: 385 FE-----KFLEENSD---W-------RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429
+ K + W + VL + P + + I RI
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 430 N---GRFGTLTAVPIHH-----LD--------RSLDFPALCALYAVTDVALVT----SLR 469
+ L + L + + C + L+T +
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS--CKI-------LLTTRFKQVT 278
Query: 470 DGMNLVSYEFVACQDLKKGVL------ILSEFAG-AAQSLGAGAILVNPWNITEVANAIA 522
D ++ + ++ + +L ++ Q L + NP
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----------- 327
Query: 523 RALNMSPEE-REKR-HWHNFTHVTTHTAQEWAETFVSELNDTVVEA---QLRI----KQV 573
R L++ E R+ W N+ HV E+ ++ L +L + +
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387
Query: 574 PPSL----------READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKL 623
P L + + L L+ T + P +ELK+
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLH--KYSLVEKQPKEST--ISIPS------IYLELKV 437
Query: 624 HPDLKQPLNA---------LCHDPKTTIVV-------------LSGSDR----NVLDKNF 657
+ + L+ D I L + + F
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497
Query: 658 QEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717
++ +L + +R + W + LN + LK Y + P +E+ +
Sbjct: 498 LDFR-FLEQK----IRHDSTAWNASGSI-LNT--LQQLKFYKPYICDNDP--KYERLVNA 547
Query: 718 LVWNYKYADVEFGRIQARDMLQ 739
++ + + D+L+
Sbjct: 548 ILDFLPKIEENLICSKYTDLLR 569
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 48/281 (17%), Positives = 81/281 (28%), Gaps = 47/281 (16%)
Query: 205 RSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHT 264
+ + Y+ N+ + ++ D V HD L ++ Y W H
Sbjct: 102 KLTEEMKELYLNVNRENSKFIDLS--SFDYVLVHDPQPAAL---IEFYEKKSPWLWRCHI 156
Query: 265 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 324
S L R V D FH +Y + +
Sbjct: 157 DLSS----PNREFWEFLRRFVEKYDRYIFHLPEYVQPELDR------------------- 193
Query: 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381
+ P ID + Q I + E F + ++ V R D KGI
Sbjct: 194 -NKAVIMPPSIDPLSE---KNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDV 249
Query: 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441
+ + K E+ + L + D PE + +G + +
Sbjct: 250 IEIYRKVKEKIPGVQ-----LLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGV 304
Query: 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482
H + + A +DV L S+R+G L E +
Sbjct: 305 HARE-------VNAFQRASDVILQMSIREGFGLTVTEAMWK 338
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 7e-06
Identities = 49/361 (13%), Positives = 104/361 (28%), Gaps = 53/361 (14%)
Query: 212 AAYIKANQMFADVVNKHYKDGDVV-----------WCHDYHLMFLPKCLKEYNSDMKVGW 260
K D++ +Y DG++V C H + K +SD+
Sbjct: 398 VELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKK 454
Query: 261 FLHTPFPSSEIH--RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG 318
S + + +D + ++ G +A T +
Sbjct: 455 LDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514
Query: 319 VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----------------AG 362
+ V G D + E E
Sbjct: 515 DVFDPKFNIV---SPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKK 571
Query: 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTS 420
+ ++ + RLD +K + + + K VV + + E +++
Sbjct: 572 KPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYD 631
Query: 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGMNLVSYEF 479
+ E ++NG+F +++ +DR L T + +L + L E
Sbjct: 632 LIEEY--KLNGQFRWISS----QMDRV-RNGELYRYICDTKGAFVQPALYEAFGLTVVEA 684
Query: 480 VACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRH 536
+ C G+ + G A+ + G ++P++ + A+ +A E+
Sbjct: 685 MTC-----GLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWD 739
Query: 537 W 537
Sbjct: 740 E 740
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 7e-06
Identities = 22/264 (8%), Positives = 59/264 (22%), Gaps = 49/264 (18%)
Query: 295 TYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 354
TY Y ++ L + T F I++ +
Sbjct: 189 TYKYRGPQIAVFNSELLKQYFNNKG---YNFTDEYFFQPKINTTLKNYINDKRQ------ 239
Query: 355 ELQETFAGRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP 413
K++L R + + A + F+++ ++
Sbjct: 240 -------KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKII------------ 280
Query: 414 EYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMN 473
VG + + ++ L L L + + + + +
Sbjct: 281 -----------SVGEKHKDIALGKGIHLNSL-GKLTLEDYADLLKRSSIGISLMISPHPS 328
Query: 474 LVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531
E G+ +++ + + + N +A +
Sbjct: 329 YPPLEMAHF-----GLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMS-FNN 382
Query: 532 REKRHWHNFTHVTTHTAQEWAETF 555
R+ + +
Sbjct: 383 RDVDKKESSNMMFYINEFNEFSFI 406
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 7e-05
Identities = 42/213 (19%), Positives = 71/213 (33%), Gaps = 29/213 (13%)
Query: 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
R++ G D E + + + + KV+ V RL KG + A
Sbjct: 209 RISVVSPGADVELYSPGNDRATERS--RRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVA 266
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRINGRFGTLTAVPIHHL 444
+ + D +V+ I E + RI RF +
Sbjct: 267 ALFDRDPDRNLRVI---ICGGPSGPNATPDTYRHMAEELGVEKRI--RF-------LDPR 314
Query: 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLG 503
L A+Y D+ V S + LV+ E A G +I + G ++
Sbjct: 315 PP----SELVAVYRAADIVAVPSFNESFGLVAMEAQAS-----GTPVIAARVGGLPIAVA 365
Query: 504 AG--AILVNPWNITEVANAIARALNMSPEEREK 534
G +LV+ + A+A+A L+ E R +
Sbjct: 366 EGETGLLVDGHSPHAWADALATLLD-DDETRIR 397
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 38/307 (12%), Positives = 86/307 (28%), Gaps = 53/307 (17%)
Query: 258 VGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR----ILGFE 313
+ + E L + R A + F + + +
Sbjct: 98 AADVCYAEKVAQE-KGFLYRLTSRYRHYAAFERATFEQGK-STKLMMLTDKQIADFQKHY 155
Query: 314 GTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD 373
T R P GI +R N +++ ++ + ++L V
Sbjct: 156 QTEPE--------RFQILPPGIYPDRKYSEQIPNSREIYRQKNG-IKEQQNLLLQVGSDF 206
Query: 374 MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRING 431
KG+ + + A E LL + + ++ + + + +
Sbjct: 207 GRKGVDRSIEALASLPESLRHNT----LLFVV-----GQDKPRKFEALAEKLGVRSNV-- 255
Query: 432 RF-GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV- 489
F V L A D+ L + ++ +V E + G+
Sbjct: 256 HFFSGRNDVS--------------ELMAAADLLLHPAYQEAAGIVLLEAITA-----GLP 296
Query: 490 LILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546
++ + G A + G ++ P++ ++ + +AL R + + T
Sbjct: 297 VLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQ 355
Query: 547 TAQEWAE 553
E
Sbjct: 356 DLYSLPE 362
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 58/379 (15%), Positives = 112/379 (29%), Gaps = 58/379 (15%)
Query: 194 GLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDG-----------DVVWCHDYHL 242
LP+E+ + ++ + + F VV HY DG + + H
Sbjct: 93 FLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152
Query: 243 MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 302
+ K K + I + AD + T
Sbjct: 153 LGAQKMEKLNVNTSNFKEMDERFKFHRRII-------AERLTMSYADKIIVSTSQERFGQ 205
Query: 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 362
S + + + P G+++ F K L+
Sbjct: 206 YSHDLYRGAVNVEDDD--------KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGS 257
Query: 363 ----RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV---PEY 415
++ RLD K + A+ + E + L I P E
Sbjct: 258 ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE 317
Query: 416 QRLTSQVHEIVGR--INGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGM 472
+ + ++ E++ G+ ++ + + L A A V +TS +
Sbjct: 318 KEILGKIIELIDNNDCRGKV----SMFPLNSQQEL--AGCYAYLASKGSVFALTSFYEPF 371
Query: 473 NLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSP 529
L E +A G+ +++ G A+ L G +LV+P + ++A + +A S
Sbjct: 372 GLAPVEAMAS-----GLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SE 425
Query: 530 EERE-------KRHWHNFT 541
E +R +T
Sbjct: 426 ETWSAYQEKGKQRVEERYT 444
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 937 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.94 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.93 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.93 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.92 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.92 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.92 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.92 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.91 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.91 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.9 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.9 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.9 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.9 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.86 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.85 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.85 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.85 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.84 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.83 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.83 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.82 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.81 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.8 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.8 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.8 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.79 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.79 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.79 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.78 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.78 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.78 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.78 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.77 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.77 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.77 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.76 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.76 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.76 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.75 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.75 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.75 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.75 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.73 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.72 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.72 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.67 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.64 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.63 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.58 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.56 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.52 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.43 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.33 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 98.99 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 98.96 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.95 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.92 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.89 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.81 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.78 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.77 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 98.76 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.63 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.61 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 98.58 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 98.55 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.55 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.47 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.44 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.38 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 98.36 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.36 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.35 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.33 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.33 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.32 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.26 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.26 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.25 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.25 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.22 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 98.22 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 98.21 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.18 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 98.17 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.15 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.15 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.1 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.07 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.06 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.05 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.02 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.92 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.91 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.9 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 97.89 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 97.88 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.87 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.87 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.86 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.86 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.84 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.82 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.8 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.73 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 97.69 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.58 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.51 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.5 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.49 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.46 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.4 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.38 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 97.28 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.21 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.19 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.16 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.15 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.12 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 97.07 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 97.06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 97.03 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 96.87 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 96.86 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.79 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 96.76 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.61 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 96.51 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.45 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 96.43 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 96.41 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 96.28 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 96.2 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.16 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 95.85 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 95.76 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.75 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 95.68 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.62 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 95.58 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 95.51 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 95.51 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 95.37 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 95.25 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 95.22 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.18 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.15 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.11 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 94.94 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 94.86 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 94.86 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 94.73 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 94.64 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 94.5 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 94.43 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.26 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 94.01 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 94.01 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 93.75 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 93.74 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 93.73 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 93.62 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 93.54 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 93.48 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 93.36 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 93.35 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 93.15 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 93.04 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 92.96 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 92.78 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 92.66 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 92.55 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 92.51 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 92.17 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 92.13 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 92.11 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 91.73 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 91.48 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 91.42 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 91.35 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 91.1 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 90.86 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 90.49 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 89.89 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 89.65 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 89.21 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 88.62 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 87.94 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 87.61 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 86.88 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 86.71 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 86.57 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 86.41 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 85.64 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 85.59 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 85.57 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 85.4 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 84.83 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 84.47 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 84.25 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 84.2 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 83.93 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 83.71 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 83.61 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 82.86 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 82.29 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 81.84 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 81.65 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 81.17 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 80.85 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 80.72 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 80.43 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 80.13 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-103 Score=909.75 Aligned_cols=453 Identities=23% Similarity=0.313 Sum_probs=403.6
Q ss_pred CCcEEEEEcCCccceEec-CCCcE---EEEecCCcHHHhccccccCCcEEEEeCCCCCCCchhhHHHHH----------h
Q 002314 93 RQRLLVVANRLPVSAIRR-GEDSW---SLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK----------A 158 (937)
Q Consensus 93 ~~~livvsnrlP~~~~~~-~~~~~---~~~~~~ggl~~~l~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~----------~ 158 (937)
..+||||||||||.++++ ++|.| .++.++|||++||.++. +|+||||+|... +.....+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~--~~~Wvgw~~~~~----~~~~~~~~~~~~~~~~~~ 75 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL--NISWIASADSED----DRRASALNPDGVTMELHS 75 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH--TCCEEEECCSHH----HHHHHHHCTTCEEEECTT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc--CCEEEecCCCcc----chhhhhcccccccccccc
Confidence 468999999999999987 57887 67788999999999887 899999998532 1111111 2
Q ss_pred hcCceEEEEecChhhhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhC--CCCCEE
Q 002314 159 LAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHY--KDGDVV 235 (937)
Q Consensus 159 ~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~--~~~DvV 235 (937)
..+++|+||+|+++++++||+||||++|||+|||+...+.. . ....|+ +.|++|++||++||++|++.+ +++|+|
T Consensus 76 ~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~-p-~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 76 GREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQ-P-SFGSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSC-C-CBCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred CCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCC-C-ccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 46799999999999999999999999999999998322100 0 012344 569999999999999999999 589999
Q ss_pred EEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCc--cchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh-Cc
Q 002314 236 WCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL-GF 312 (937)
Q Consensus 236 wvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp--~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l-g~ 312 (937)
||||||||+||.+||+++|+++||||||||||++|+|++|| ||++|+++||+||+|||||++|++||++||.+++ |.
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 87
Q ss_pred cc--CCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 313 EG--TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 313 ~~--~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
+. ....++++|+.++|.++|+|||++.|.+... ++ .+++|++++++++||+|||||+.||+..+|+|| +|++
T Consensus 234 ~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~ 307 (496)
T 3t5t_A 234 RIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAA 307 (496)
T ss_dssp EEETTTTEEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHH
T ss_pred cccccCCeEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHH
Confidence 65 3457899999999999999999999987643 11 156788888999999999999999999999999 9999
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (937)
++|+++ +++|||||.|+++++++|+++++++++++++||.+||+. ||+|+ +.++.+++.++|++|||||+||++|
T Consensus 308 ~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~SlrE 382 (496)
T 3t5t_A 308 RGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNSTVD 382 (496)
T ss_dssp HTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSSB
T ss_pred hCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcccc
Confidence 999999 999999999999999999999999999999999999875 78874 6899999999999999999999999
Q ss_pred CCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHH
Q 002314 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (937)
Q Consensus 471 G~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 550 (937)
|||||++|||||+ +++||+|+|+++|++++|+.+|++|||+|++++|+||.++|+|+++||++|+++++++|.+||+.+
T Consensus 383 GfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~ 461 (496)
T 3t5t_A 383 GQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEA 461 (496)
T ss_dssp SCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHH
T ss_pred cCChhHHHHHHhC-CCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHH
Confidence 9999999999996 457899999999999999778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHH
Q 002314 551 WAETFVSELNDTVVE 565 (937)
Q Consensus 551 W~~~fl~~l~~~~~~ 565 (937)
|+++||.+|..+...
T Consensus 462 W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 462 WVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccc
Confidence 999999999887544
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-90 Score=806.81 Aligned_cols=449 Identities=35% Similarity=0.621 Sum_probs=408.0
Q ss_pred CcEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChh
Q 002314 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (937)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (937)
+||||||||||+.. + .+.++|||++||.++ +..+++||||+|.. ++ +++........+++|+||||+++
T Consensus 2 ~~livvsnr~p~~~----~----~~~~~ggl~~~l~~~~~~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~~~ 71 (482)
T 1uqt_A 2 SRLVVVSNRIAPPD----E----HAASAGGLAVGILGALKAAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLSEQ 71 (482)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCC----C----CCcCCCcHHHHHHHHHhhCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECCHH
Confidence 58999999999972 1 146899999999988 77899999999975 32 11111112346899999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHh
Q 002314 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (937)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (937)
++++||+||||++|||+|||..... .|+ ..|.+|.++|+.||++|.+.++++|+|||||||++++|.++|+
T Consensus 72 ~~~~~y~gf~~~~lWp~~H~~~~~~--------~~~~~~w~~y~~vN~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 72 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhhhccccccCcCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECchHHHHHHHHHH
Confidence 9999999999999999999984222 466 5699999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeeEEEE
Q 002314 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAA 330 (937)
Q Consensus 252 ~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~-~~v~~~gr~~~i~v 330 (937)
+.++++|+||+|+|||++++|+++|++++|+++|+++|+||||++.|+++|+++|+++++.+... ..++++|+.++|.+
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~v 223 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 223 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999876533 44788899999999
Q ss_pred EecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCC
Q 002314 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (937)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~ 410 (937)
+|+|||++.|.+....+++.+ ...+|++++++++|++||||++.||+..+|+||++|++++|+++++++|||||.|+++
T Consensus 224 ip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~ 302 (482)
T 1uqt_A 224 YPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 302 (482)
T ss_dssp CCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred EeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCcc
Confidence 999999999987655555555 6788999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcC-CCCce
Q 002314 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (937)
Q Consensus 411 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~-~~~g~ 489 (937)
++++|+++++++++++++||.+||..+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||+. +++||
T Consensus 303 ~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gp 382 (482)
T 1uqt_A 303 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 382 (482)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999984 55689
Q ss_pred EEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 490 lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
||+|+++|+++++ .+|++|||+|++++|++|.++|+|++++|++|+++++++|.+||+..|+++|+..|+++
T Consensus 383 vV~S~~~G~~~~l-~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 383 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCHHHh-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 9999999999999 79999999999999999999999999999999999999999999999999999999876
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-26 Score=259.57 Aligned_cols=313 Identities=19% Similarity=0.193 Sum_probs=237.2
Q ss_pred HHHHHHHHHHHHHHHHHh---CCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCch---hhhc--------cCc
Q 002314 211 FAAYIKANQMFADVVNKH---YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHR--------TLP 276 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~---~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~---e~fr--------~lp 276 (937)
+..+....+.....+... -...|+||+|+++..+++.++++. .++|+++++|..++.. ..+. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 444555555555555555 347799999999998888888754 5899999999987531 1111 111
Q ss_pred cchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHH
Q 002314 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 356 (937)
Q Consensus 277 ~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~l 356 (937)
........+..+|.|.+.+..+++.... .++. ...++.++|+|||.+.|.+....+........+
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~-----------~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~ 242 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN-----------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSL 242 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG-----------GTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhh-----------cCCceeecCCCCCchhcCcccccchhhhhHHHH
Confidence 1123344455799999999887766222 1111 235788999999999998753333334456677
Q ss_pred HHHhc--CCcEEEEEeccc-ccCCHHHHHHHHHHhHHhC--cCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhc
Q 002314 357 QETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431 (937)
Q Consensus 357 r~~~~--~~~iIL~VdRld-~~KGi~~~l~Af~~ll~~~--P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~ 431 (937)
+++++ ++++|+++||+. +.||++.+++|++.+.+++ |+ +.|+++|. ++. .+.+++++++.+.+
T Consensus 243 ~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~-----g~~--~~~~~l~~~~~~~~- 310 (439)
T 3fro_A 243 LSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGK-----GDP--ELEGWARSLEEKHG- 310 (439)
T ss_dssp HHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECC-----CCH--HHHHHHHHHHHHCT-
T ss_pred HHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCC----eEEEEEcC-----CCh--hHHHHHHHHHhhcC-
Confidence 77773 448999999999 9999999999999998766 65 45877763 221 23456666766543
Q ss_pred ccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-CCceEEEC
Q 002314 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVN 510 (937)
Q Consensus 432 ~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-g~~gllVn 510 (937)
.++++.|.++.+++..+|+.||++|+||..||||++++|||||+ .|+|+|..+|..+.+ +.+|++|+
T Consensus 311 --------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G----~Pvi~s~~~~~~e~~~~~~g~~~~ 378 (439)
T 3fro_A 311 --------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVK 378 (439)
T ss_dssp --------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT----CEEEEESSTHHHHHCCTTTCEEEC
T ss_pred --------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC----CCeEEcCCCCcceeEEcCceEEeC
Confidence 25556899999999999999999999999999999999999994 799999998888888 44899999
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhH
Q 002314 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (937)
Q Consensus 511 P~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~ 563 (937)
|.|++++|++|.+++++.++.+.++.++++++++.+++..+++++++.++++.
T Consensus 379 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 379 AGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 99999999999999995556778888888999999999999999998887654
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-25 Score=262.15 Aligned_cols=298 Identities=17% Similarity=0.189 Sum_probs=207.4
Q ss_pred CCCCEEEEeCcccchHHHHHHhhC------CCCeEEEEEccCC-----Cchhhh-ccCcc--------------------
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPF-----PSSEIH-RTLPS-------------------- 277 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~------~~~~I~~flH~Pf-----Ps~e~f-r~lp~-------------------- 277 (937)
.++||||+||||..++|.+++... .+++++|++|..- |....- ..++.
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 367899999999999999998754 3789999999752 111100 00110
Q ss_pred chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcC--------Cch
Q 002314 278 RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--------NPV 349 (937)
Q Consensus 278 r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~--------~~~ 349 (937)
-.-+..++..||.|..-++.|++..++. .+. ..++....+..+|.+||||||.+.|.+.... ...
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~----~~~---g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~ 304 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISG----IAR---GCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTA 304 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTT----CCC---CSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTH
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcc----ccc---ccccccccccCCeEEEECCcchhhcCCCCccccccccchhhh
Confidence 1234567888999999999888765431 110 0112223355679999999999999764211 000
Q ss_pred H----HHHHHHHHHh-----cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHH
Q 002314 350 Q----VHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420 (937)
Q Consensus 350 ~----~~~~~lr~~~-----~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~ 420 (937)
. .....+++.+ .+.++|++|||+.+.||++.+|+|+.+++++++ .|+++|.+ +. . ...
T Consensus 305 ~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G---~~-~---~~~ 371 (536)
T 3vue_A 305 IEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTG---KK-K---FEK 371 (536)
T ss_dssp HHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCB---CH-H---HHH
T ss_pred hhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEecc---Cc-h---HHH
Confidence 1 1123444444 257899999999999999999999999976543 25555532 22 2 223
Q ss_pred HHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccc
Q 002314 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 500 (937)
Q Consensus 421 ~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~ 500 (937)
.++.+...++. .+.+ .+..+.+++..+|+.||+||+||.+||||++++|||||+ .|+|+|+.+|..+
T Consensus 372 ~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G----~PvI~s~~gG~~e 438 (536)
T 3vue_A 372 LLKSMEEKYPG--------KVRA-VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG----TPCACASTGGLVD 438 (536)
T ss_dssp HHHHHHHHSTT--------TEEE-ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT----CCEEECSCTHHHH
T ss_pred HHHHHHhhcCC--------ceEE-EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcC----CCEEEcCCCCchh
Confidence 34444443332 3554 567899999999999999999999999999999999994 8999999999999
Q ss_pred cc--CCceE----------EECCCCHHHHHHHHHHHHcCC-HHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 501 SL--GAGAI----------LVNPWNITEVANAIARALNMS-PEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 501 ~l--g~~gl----------lVnP~D~~~lA~aI~~aL~m~-~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
.+ |.+|+ +|+|.|++++|++|.++|..- .++++++.++. .-+.|+|.+-++++++-+.+.
T Consensus 439 ~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 439 TVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHHHHHHHHHHHHTT
T ss_pred eeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Confidence 88 66777 788899999999999998632 12333333332 225689999999988776654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-25 Score=235.65 Aligned_cols=224 Identities=16% Similarity=0.237 Sum_probs=165.8
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCce
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 670 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~ 670 (937)
.||||+|+||||++...+| ....++++++++|++|+++ | .|+|+|||++..+..++..+ +++|++||+
T Consensus 1 ikli~~DlDGTLl~~~~~~---------~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa 68 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD-INMICYHGA 68 (239)
T ss_dssp -CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS-CEEEEGGGT
T ss_pred CeEEEEecCCCCcCCCCCc---------ccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhccc-hheEEECCE
Confidence 3799999999999875443 3557899999999999984 7 99999999999999999888 899999999
Q ss_pred EEEecCCeeeeccccccChhH-HHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCC
Q 002314 671 FLRCTTGKWMTTMPEHLNMEW-VDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 749 (937)
Q Consensus 671 ~ir~~~~~w~~~~~~~~~~~w-~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~ 749 (937)
++.. ++.+....+......+ .+.+..+++.+ .+.++.+++.++..+.+||+..++. .....+.+...+ ... .
T Consensus 69 ~i~~-~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l-~~~---~ 141 (239)
T 1u02_A 69 CSKI-NGQIVYNNGSDRFLGVFDRIYEDTRSWV-SDFPGLRIYRKNLAVLYHLGLMGAD-MKPKLRSRIEEI-ARI---F 141 (239)
T ss_dssp EEEE-TTEEEECTTGGGGHHHHHHHHHHHTTHH-HHSTTCEEEEETTEEEEECTTSCST-THHHHHHHHHHH-HHH---H
T ss_pred EEee-CCeeeecccccccchhhHHHHHHHHHHH-hhCCCcEEEecCCEEEEEcCCCChh-HHHHHHHHHHHH-hcc---C
Confidence 9987 4443210000001111 12334444433 3456888888888888999865321 111123333333 221 1
Q ss_pred CeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCCCCCC
Q 002314 750 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDA 829 (937)
Q Consensus 750 ~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~~~~~ 829 (937)
++.+..+..++||+|+++|||.||++|+++++ ++|||| +.||++||+.+..
T Consensus 142 ~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-----------via~GD-~~ND~~Ml~~a~~----------------- 192 (239)
T 1u02_A 142 GVETYYGKMIIELRVPGVNKGSAIRSVRGERP-----------AIIAGD-DATDEAAFEANDD----------------- 192 (239)
T ss_dssp TCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-----------EEEEES-SHHHHHHHHTTTT-----------------
T ss_pred CcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-----------eEEEeC-CCccHHHHHHhhC-----------------
Confidence 35667788999999999999999999998752 899999 9999999998731
Q ss_pred cCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEEEEECCCCCcccee
Q 002314 830 IKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFL 909 (937)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~t~A~y~ 909 (937)
+++|+||..++.|+|.
T Consensus 193 ----------------------------------------------------------------g~~vam~Na~~~A~~v 208 (239)
T 1u02_A 193 ----------------------------------------------------------------ALTIKVGEGETHAKFH 208 (239)
T ss_dssp ----------------------------------------------------------------SEEEEESSSCCCCSEE
T ss_pred ----------------------------------------------------------------CcEEEECCCCCcceEE
Confidence 6799999988999999
Q ss_pred eCC---HHHHHHHHHHhhhc
Q 002314 910 LQS---SDEVVSFLKKLADA 926 (937)
Q Consensus 910 l~~---~~~V~~~L~~La~~ 926 (937)
+.+ .+.|..+|+.+...
T Consensus 209 ~~~~~~~~gV~~~l~~~~~~ 228 (239)
T 1u02_A 209 VADYIEMRKILKFIEMLGVQ 228 (239)
T ss_dssp ESSHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHh
Confidence 988 88999999997654
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-23 Score=244.08 Aligned_cols=299 Identities=18% Similarity=0.136 Sum_probs=211.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCch----hhhcc--Cc-------------cchHHHHhhhcCCEE
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS----EIHRT--LP-------------SRSDLLRAVLAADLV 291 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~----e~fr~--lp-------------~r~eil~~ll~aDlI 291 (937)
..|+||+|+++..+++.+++.+..++|+++++|..++.. ..+.. ++ ...-....+..+|.|
T Consensus 129 ~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 208 (485)
T 2qzs_A 129 RPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHI 208 (485)
T ss_dssp CCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeE
Confidence 579999999998888888763456899999999875421 11111 01 011223334578999
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCee--eEEEEEecccChhhhhhhhcC-----------CchHHHHHHHHH
Q 002314 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL--TRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQE 358 (937)
Q Consensus 292 gF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~--~~i~v~P~GID~~~f~~~~~~-----------~~~~~~~~~lr~ 358 (937)
.+.+....+.+... .+|.... ..+ ..+. .++.++|+|||.+.|.+.... +........+++
T Consensus 209 i~~S~~~~~~~~~~---~~~~~~~-~~~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 2qzs_A 209 TAVSPTYAREITEP---QFAYGME-GLL--QQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQI 282 (485)
T ss_dssp EESSHHHHHHTTSH---HHHTTCH-HHH--HHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHH
T ss_pred EecCHHHHHHHhcc---ccCcchH-HHH--HhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHH
Confidence 99888766554321 0110000 000 0012 468899999999988754210 001112345666
Q ss_pred Hhc-----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhccc
Q 002314 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (937)
Q Consensus 359 ~~~-----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~ 433 (937)
+++ ++++|+++||+++.||++.+++|+..+.+ ++ +.|+++|.+ +. .+.+++++++.+.+
T Consensus 283 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~~--~~~~~l~~~~~~~~--- 346 (485)
T 2qzs_A 283 AMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGAG-----DP--VLQEGFLAAAAEYP--- 346 (485)
T ss_dssp HHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEEE-----CH--HHHHHHHHHHHHST---
T ss_pred HcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeCC-----ch--HHHHHHHHHHHhCC---
Confidence 663 56899999999999999999999999876 23 457777642 21 24556667766543
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--C--------
Q 002314 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G-------- 503 (937)
Q Consensus 434 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g-------- 503 (937)
..|+++.|. +.+++..+|+.||++|+||.+||||++++|||||+ .|+|+|..+|..+.+ |
T Consensus 347 -----~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~ 416 (485)
T 2qzs_A 347 -----GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYG----TLPLVRRTGGLADTVSDCSLENLADG 416 (485)
T ss_dssp -----TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTT
T ss_pred -----CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCC----CCEEECCCCCccceeccCcccccccc
Confidence 146655676 88889999999999999999999999999999994 799999988888888 4
Q ss_pred -CceEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhH
Q 002314 504 -AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (937)
Q Consensus 504 -~~gllVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~ 563 (937)
.+|++|+|.|++++|++|.+++. ..++.+.++.+++++ +.++|...++++++-++++.
T Consensus 417 ~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 417 VASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp CCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC
T ss_pred ccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhh
Confidence 68999999999999999999994 244556666555543 78999999999988877654
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-24 Score=251.21 Aligned_cols=305 Identities=16% Similarity=0.084 Sum_probs=215.7
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhh-hccC----c---------cchHH-HHhhhcCCEEEEeC
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----P---------SRSDL-LRAVLAADLVGFHT 295 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~-fr~l----p---------~r~ei-l~~ll~aDlIgF~t 295 (937)
..|+||+|+++..+++.++++. .++|+++++|..++.... +... | .+..+ ...+-.+|.|.+.+
T Consensus 120 ~~Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 198 (499)
T 2r60_A 120 FPQVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVST 198 (499)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESS
T ss_pred CCCEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECC
Confidence 5699999998766666666554 378899999986542110 0000 0 00011 22334688888888
Q ss_pred HHHHHHHHHHHHHHhC-cccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc--------CCcEE
Q 002314 296 YDYARHFVSACTRILG-FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--------GRKVM 366 (937)
Q Consensus 296 ~~~~~~Fl~~~~r~lg-~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~--------~~~iI 366 (937)
....+.+... ..+| .. . .....++.++|+|||.+.|.+.. ..+....++++++ ++++|
T Consensus 199 ~~~~~~~~~~--~~~g~~~------~-~~~~~ki~vi~ngvd~~~~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~i 265 (499)
T 2r60_A 199 SQERFGQYSH--DLYRGAV------N-VEDDDKFSVIPPGVNTRVFDGEY----GDKIKAKITKYLERDLGSERMELPAI 265 (499)
T ss_dssp HHHHHHTTTS--GGGTTTC------C-TTCGGGEEECCCCBCTTTSSSCC----CHHHHHHHHHHHHHHSCGGGTTSCEE
T ss_pred HHHHHHHHhh--hcccccc------c-ccCCCCeEEECCCcChhhcCccc----hhhhHHHHHHHhcccccccCCCCcEE
Confidence 7554433220 0011 00 0 00345788999999999886531 1122344555543 67899
Q ss_pred EEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCC------h-hHHHHHHHHHHHHHHHhhcccCCCCcc
Q 002314 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD------V-PEYQRLTSQVHEIVGRINGRFGTLTAV 439 (937)
Q Consensus 367 L~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~------~-~~y~~l~~~l~~lv~~IN~~~g~~~~~ 439 (937)
+++||+.+.||+..+++|+..+.+++|+. +.|+++|... +. . .+..++.+++++++.+.+.. .
T Consensus 266 ~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~------~ 335 (499)
T 2r60_A 266 IASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR------G 335 (499)
T ss_dssp EECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB------T
T ss_pred EEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC------c
Confidence 99999999999999999999998776653 3466665411 11 0 11233466777777765421 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCC
Q 002314 440 PIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWN 513 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~A----Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D 513 (937)
.|+| .|.++.+++..+|+.| |++|+||.+||||++++|||||+ .|+|+|..+|..+.+ +.+|++|+|.|
T Consensus 336 ~V~~-~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~g~l~~~~d 410 (499)
T 2r60_A 336 KVSM-FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG----LPAVVTRNGGPAEILDGGKYGVLVDPED 410 (499)
T ss_dssp TEEE-EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT----CCEEEESSBHHHHHTGGGTSSEEECTTC
T ss_pred eEEE-CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcC----CCEEEecCCCHHHHhcCCceEEEeCCCC
Confidence 3664 7899999999999999 99999999999999999999994 799999988888887 45799999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhc-CCHHHHHHHHHHHHHHhHHH
Q 002314 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDTVVE 565 (937)
Q Consensus 514 ~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~~l~~~~~~ 565 (937)
++++|++|.+++++ ++.+.++.+++++++.+ |++...++++++.++++...
T Consensus 411 ~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 411 PEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp HHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999985 45677778888888876 99999999999988877544
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-23 Score=241.18 Aligned_cols=295 Identities=18% Similarity=0.179 Sum_probs=214.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhh-hccC----c-cchHH-HHhhhcCCEEEEeCHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----P-SRSDL-LRAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~-fr~l----p-~r~ei-l~~ll~aDlIgF~t~~~~~~Fl 303 (937)
..|+||+|++...+++.++++. .++|+++++|..++.... +... + .+..+ ...+-.+|.|.+.+....+.+.
T Consensus 122 ~~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 200 (438)
T 3c48_A 122 TYDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLM 200 (438)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred CCCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 3799999997665565555543 378999999987542110 0000 0 01111 1223468999999887666554
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~ 380 (937)
+ .+|. ...++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||+..
T Consensus 201 ~----~~g~-----------~~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ 260 (438)
T 3c48_A 201 H----HYDA-----------DPDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKGPQV 260 (438)
T ss_dssp H----HHCC-----------CGGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCHHH
T ss_pred H----HhCC-----------ChhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCCHHH
Confidence 3 2232 2356889999999988865311 1222356665 36789999999999999999
Q ss_pred HHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 002314 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (937)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (937)
+++|+..+.+++|+. ++.|+++|.+.. +++ +.+++++++.+.+.. ..|++ .|.++.+++..+|+.|
T Consensus 261 li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~----~~~~l~~~~~~~~l~------~~v~~-~g~~~~~~~~~~~~~a 326 (438)
T 3c48_A 261 LIKAVAALFDRDPDR--NLRVIICGGPSG-PNA----TPDTYRHMAEELGVE------KRIRF-LDPRPPSELVAVYRAA 326 (438)
T ss_dssp HHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT------TTEEE-ECCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCc----HHHHHHHHHHHcCCC------CcEEE-cCCCChHHHHHHHHhC
Confidence 999999999998842 356887875321 122 234555566554321 13664 7899999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHh
Q 002314 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (937)
Q Consensus 461 Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 538 (937)
|++|+||..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.+++++ ++.+.++.++
T Consensus 327 dv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~ 401 (438)
T 3c48_A 327 DIVAVPSFNESFGLVAMEAQASG----TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGED 401 (438)
T ss_dssp SEEEECCSCCSSCHHHHHHHHTT----CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred CEEEECccccCCchHHHHHHHcC----CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 99999999999999999999994 799999998888888 4579999999999999999999995 4567777788
Q ss_pred hhhhhhcCCHHHHHHHHHHHHHHhHHH
Q 002314 539 NFTHVTTHTAQEWAETFVSELNDTVVE 565 (937)
Q Consensus 539 ~~~~V~~~~~~~W~~~fl~~l~~~~~~ 565 (937)
+++++.+|++...++++++.++++...
T Consensus 402 ~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 402 AVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 888888899999999999888876544
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-23 Score=241.52 Aligned_cols=299 Identities=16% Similarity=0.183 Sum_probs=211.0
Q ss_pred CCCEEEEeCcccchHHHHHHhh-CCCCeEEEEEccCCCch----hhhcc--Ccc-------------chHHHHhhhcCCE
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS----EIHRT--LPS-------------RSDLLRAVLAADL 290 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~-~~~~~I~~flH~PfPs~----e~fr~--lp~-------------r~eil~~ll~aDl 290 (937)
..|+||+|+++..+++.++++. ..++|+++++|..++.. ..+.. ++. ..-....+..+|.
T Consensus 130 ~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 209 (485)
T 1rzu_A 130 RPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATA 209 (485)
T ss_dssp CCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCE
Confidence 5799999999888888888764 36899999999975421 11111 110 1122333456899
Q ss_pred EEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcC-----------CchHHHHHHHHHH
Q 002314 291 VGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQET 359 (937)
Q Consensus 291 IgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~-----------~~~~~~~~~lr~~ 359 (937)
|.+.+....+.+... ..|... .. .+.....++.++|+|||.+.|.+.... +........++++
T Consensus 210 vi~~S~~~~~~~~~~---~~g~~~--~~-~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 283 (485)
T 1rzu_A 210 LSTVSPSYAEEILTA---EFGMGL--EG-VIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEH 283 (485)
T ss_dssp EEESCHHHHHHTTSH---HHHTTC--HH-HHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHH
T ss_pred EEecCHhHHHHHhcc---ccCcch--HH-HHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHh
Confidence 999888766654321 001000 00 000023578899999999988754211 0011123456666
Q ss_pred hc---C-CcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCC
Q 002314 360 FA---G-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (937)
Q Consensus 360 ~~---~-~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~ 435 (937)
++ + +++|++|||+.+.||+..+++|+..+.+ ++ +.|+++|.+ ++ .+++++++++.+.+
T Consensus 284 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~~--~~~~~l~~~~~~~~----- 345 (485)
T 1rzu_A 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLGAG-----DV--ALEGALLAAASRHH----- 345 (485)
T ss_dssp HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEECB-----CH--HHHHHHHHHHHHTT-----
T ss_pred cCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEeCC-----ch--HHHHHHHHHHHhCC-----
Confidence 63 2 6799999999999999999999999876 23 558878642 21 24556667766543
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--C---------C
Q 002314 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---------A 504 (937)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g---------~ 504 (937)
..|+++.|. +.+++..+|+.||+||+||.+||||++++|||||+ .|+|+|..+|..+.+ | .
T Consensus 346 ---~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~~~ 417 (485)
T 1rzu_A 346 ---GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CIPVVARTGGLADTVIDANHAALASKAA 417 (485)
T ss_dssp ---TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred ---CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCC----CCEEEeCCCChhheecccccccccccCC
Confidence 146655676 88888999999999999999999999999999994 799999998888888 4 6
Q ss_pred ceEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhH
Q 002314 505 GAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (937)
Q Consensus 505 ~gllVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~ 563 (937)
+|++|+|.|++++|++|.+++. ..++.+.++.+++++ +.++|...++++++-++++.
T Consensus 418 ~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 418 TGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp CBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHT
T ss_pred cceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhh
Confidence 8999999999999999999994 234566666666554 78999999999988777653
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-23 Score=232.03 Aligned_cols=280 Identities=18% Similarity=0.225 Sum_probs=209.1
Q ss_pred CCCEEEEeCcccc-hHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHH-hhhcCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~-llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~-~ll~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
..|+||+|+...+ ++...+++ ....++.+++|...+ .+...+....+.+ .+-.+|.|.+.+....+.+..
T Consensus 86 ~~Dvv~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~---- 157 (394)
T 3okp_A 86 EIDNVWFGAAAPLALMAGTAKQ-AGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS---- 157 (394)
T ss_dssp TCSEEEESSCTTGGGGHHHHHH-TTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH----
T ss_pred CCCEEEECCcchHHHHHHHHHh-cCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH----
Confidence 4699999987655 44444444 333358889996432 1122222233333 344789999999876665554
Q ss_pred HhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---CCcEEEEEecccccCCHHHHHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAF 385 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIL~VdRld~~KGi~~~l~Af 385 (937)
.. +...++.++|+|||.+.|.+.. ......++++++ ++++|+++||+.+.||+..+++|+
T Consensus 158 ~~------------~~~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~ 220 (394)
T 3okp_A 158 AF------------GSHPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAM 220 (394)
T ss_dssp HH------------CSSSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHH
T ss_pred hc------------CCCCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHH
Confidence 11 1235789999999999886421 223456677763 458999999999999999999999
Q ss_pred HHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002314 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (937)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 465 (937)
+.+.+++|+++ |+++|. ++.. +++++++..++ ..|++ .|.++.+++..+|+.||++|+
T Consensus 221 ~~l~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~--------~~v~~-~g~~~~~~~~~~~~~ad~~v~ 278 (394)
T 3okp_A 221 PQVIAARPDAQ----LLIVGS-----GRYE----STLRRLATDVS--------QNVKF-LGRLEYQDMINTLAAADIFAM 278 (394)
T ss_dssp HHHHHHSTTCE----EEEECC-----CTTH----HHHHHHTGGGG--------GGEEE-EESCCHHHHHHHHHHCSEEEE
T ss_pred HHHHhhCCCeE----EEEEcC-----chHH----HHHHHHHhccc--------CeEEE-cCCCCHHHHHHHHHhCCEEEe
Confidence 99999988764 776753 2322 33444442222 13664 688999999999999999999
Q ss_pred CCCC-------cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 002314 466 TSLR-------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (937)
Q Consensus 466 ~Sl~-------EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (937)
||.. ||||++++|||||+ .|+|+|..+|..+.+ + +|++++|.|+++++++|.+++++ ++.++++.
T Consensus 279 ps~~~~~~~~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~ 352 (394)
T 3okp_A 279 PARTRGGGLDVEGLGIVYLEAQACG----VPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDD-PIRRAAMG 352 (394)
T ss_dssp CCCCBGGGTBCCSSCHHHHHHHHTT----CCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTC-HHHHHHHH
T ss_pred cCccccccccccccCcHHHHHHHcC----CCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 9999 99999999999994 799999998888888 4 89999999999999999999985 45777777
Q ss_pred Hhhhhhhhc-CCHHHHHHHHHHHHHHhH
Q 002314 537 WHNFTHVTT-HTAQEWAETFVSELNDTV 563 (937)
Q Consensus 537 ~~~~~~V~~-~~~~~W~~~fl~~l~~~~ 563 (937)
+++++++.+ |++..+++++++.+++..
T Consensus 353 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 353 AAGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 888888865 899999999998887653
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.5e-24 Score=261.53 Aligned_cols=311 Identities=12% Similarity=0.097 Sum_probs=214.2
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHH-------------HHhhhcCCEEEEeCHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-------------LRAVLAADLVGFHTYD 297 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~ei-------------l~~ll~aDlIgF~t~~ 297 (937)
.+|+||.|++...+++.++++.. ++|++++.|...+.........| +.+ ...+-.||.|...+..
T Consensus 407 ~PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~ 484 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQ 484 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHH
T ss_pred CCeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHH
Confidence 57999999877777777776654 89999999975332111111111 111 1145678999888875
Q ss_pred HHHHHHHHHHHHhCccc---CCC------ceeeCCeeeEEEEEecccChhhhhhhhcCCc----hHHHHHHH-------H
Q 002314 298 YARHFVSACTRILGFEG---TPE------GVEDQGRLTRVAAFPIGIDSERFIRALEINP----VQVHIKEL-------Q 357 (937)
Q Consensus 298 ~~~~Fl~~~~r~lg~~~---~~~------~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~----~~~~~~~l-------r 357 (937)
.+......+... +... .+. ++.... .++.++|+|||.+.|.+...... .......+ +
T Consensus 485 ~~~~l~~~~~~y-~~~~~~~~p~Lyr~~~gI~~~~--~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r 561 (816)
T 3s28_A 485 EIAGSKETVGQY-ESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK 561 (816)
T ss_dssp HHHCCSSSCCTT-GGGSSEEETTTEEEEESCCTTC--TTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBT
T ss_pred HHHHHHHHHHHh-hhhhccccchhhhcccccccCC--CCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHH
Confidence 544211100000 0000 000 111111 28999999999999976542211 01111111 1
Q ss_pred HH-----hcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCC--CCChhHHHHHHHHHHHHHHHhh
Q 002314 358 ET-----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTSQVHEIVGRIN 430 (937)
Q Consensus 358 ~~-----~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~--r~~~~~y~~l~~~l~~lv~~IN 430 (937)
+. -.++++|++|||+++.||+..+++||.++.+.+|++ .|+++|.+. .....+..+..+++.+++.+.+
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v----~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lg 637 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELA----NLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYK 637 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHC----EEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCe----EEEEEeCCCcccccchhhHHHHHHHHHHHHHcC
Confidence 11 135789999999999999999999999998877765 488787543 1122334455667777777654
Q ss_pred cccCCCCcccEEEeCC----CCCHHHHHHHHH-HccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--C
Q 002314 431 GRFGTLTAVPIHHLDR----SLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G 503 (937)
Q Consensus 431 ~~~g~~~~~pV~~~~~----~v~~~el~aly~-~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g 503 (937)
.. ..|.| .| .++.+++..+|+ +||+||+||.+||||++++|||||+ .|+|+|..+|..+.+ |
T Consensus 638 L~------~~V~f-lG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G----~PVIasd~GG~~EiV~dg 706 (816)
T 3s28_A 638 LN------GQFRW-ISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVHG 706 (816)
T ss_dssp CB------BBEEE-ECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTT----CCEEEESSBTHHHHCCBT
T ss_pred CC------CcEEE-ccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcC----CCEEEeCCCChHHHHccC
Confidence 21 24665 45 445699999998 6899999999999999999999994 899999999999988 6
Q ss_pred CceEEECCCCHHHHHHHHHHHH----cCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHHHh
Q 002314 504 AGAILVNPWNITEVANAIARAL----NMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 504 ~~gllVnP~D~~~lA~aI~~aL----~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~~ 562 (937)
.+|++|+|.|++++|++|.+++ .++ +.+.++.+++++++ +.|+|..+++++++-++..
T Consensus 707 ~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 707 KSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp TTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred CcEEEeCCCCHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7899999999999999998877 555 56777888889988 8899999999998876654
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-23 Score=234.21 Aligned_cols=280 Identities=21% Similarity=0.201 Sum_probs=200.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+|++|+++...+..++++ ..|+.+++|..++.... .....+.+.+..+|.+.+.+.++.+
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~----~~~~~~~~~~~~~~~~i~~~s~~~~---------- 188 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNR----EFWEFLRRFVEKYDRYIFHLPEYVQ---------- 188 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCH----HHHHHHHHHHTTSSEEEESSGGGSC----------
T ss_pred CCCEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccH----HHHHHHHHHHHhCCEEEEechHHHH----------
Confidence 569999999887766655543 28899999987653210 0011122223345555433322111
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---CCcEEEEEecccccCCHHHHHHHHHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAFEK 387 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIL~VdRld~~KGi~~~l~Af~~ 387 (937)
..+ ...++.++|+|||+..|.+... .......++++++ ++++|+++||+.+.||+..+++|+..
T Consensus 189 ------~~~----~~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 255 (416)
T 2x6q_A 189 ------PEL----DRNKAVIMPPSIDPLSEKNVEL---KQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255 (416)
T ss_dssp ------TTS----CTTTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHH
T ss_pred ------hhC----CccceEEeCCCCChhhhccccc---ChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 111 1146779999999877654211 1234456677663 67899999999999999999999999
Q ss_pred hHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC---CCCHHHHHHHHHHccEEE
Q 002314 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR---SLDFPALCALYAVTDVAL 464 (937)
Q Consensus 388 ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~---~v~~~el~aly~~ADv~v 464 (937)
+.+++|+++ |+++|.+.. +.+++ .+.+++++.+.+.. ..|++ .| .++.+++..+|+.||++|
T Consensus 256 l~~~~~~~~----l~i~G~g~~-~~~~~---~~~l~~~~~~~~~~------~~V~~-~G~~~~~~~~~~~~~~~~ad~~v 320 (416)
T 2x6q_A 256 VKEKIPGVQ----LLLVGVMAH-DDPEG---WIYFEKTLRKIGED------YDVKV-LTNLIGVHAREVNAFQRASDVIL 320 (416)
T ss_dssp HHHHCTTCE----EEEEECCCT-TCHHH---HHHHHHHHHHHTTC------TTEEE-EEGGGTCCHHHHHHHHHHCSEEE
T ss_pred HHHhCCCeE----EEEEecCcc-cchhH---HHHHHHHHHHhCCC------CcEEE-ecccCCCCHHHHHHHHHhCCEEE
Confidence 999988765 777775331 11322 34455555554421 24665 45 455889999999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (937)
+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++ |++++|++|.++++++ +.+.++.++++++
T Consensus 321 ~ps~~E~~~~~~lEAma~G----~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~-~~~~~~~~~a~~~ 393 (416)
T 2x6q_A 321 QMSIREGFGLTVTEAMWKG----KPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKHP-EVSKEMGAKAKER 393 (416)
T ss_dssp ECCSSCSSCHHHHHHHHTT----CCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHCH-HHHHHHHHHHHHH
T ss_pred ECCCcCCCccHHHHHHHcC----CCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Confidence 9999999999999999994 799999998888887 56899997 9999999999999854 5677777788888
Q ss_pred hh-cCCHHHHHHHHHHHHHHh
Q 002314 543 VT-THTAQEWAETFVSELNDT 562 (937)
Q Consensus 543 V~-~~~~~~W~~~fl~~l~~~ 562 (937)
+. .|++...++++++.++++
T Consensus 394 ~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 394 VRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp HHHHTBHHHHHHHHHHHHHTC
T ss_pred HHHHcCHHHHHHHHHHHHHHh
Confidence 75 799999999998877653
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=231.88 Aligned_cols=283 Identities=14% Similarity=0.086 Sum_probs=203.2
Q ss_pred CCCEEEEeCcccchHHHHHHhh-CC-CCeEEEEEccCCCchhhhccCccchHHHHhhhcCC--EEEEeCHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEY-NS-DMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD--LVGFHTYDYARHFVSAC 306 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~-~~-~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aD--lIgF~t~~~~~~Fl~~~ 306 (937)
..|+|++|.+...+.+.+.+.. .| ..++...+|...+.. +..+...+-.+| .|.+.+....+.+..
T Consensus 81 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ii~~S~~~~~~~~~-- 150 (413)
T 3oy2_A 81 KPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNI--------RENLWWIFSHPKVVGVMAMSKCWISDICN-- 150 (413)
T ss_dssp CCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSC--------CGGGGGGGGCTTEEEEEESSTHHHHHHHH--
T ss_pred CCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhh--------HHHHHHHHhccCCceEEEcCHHHHHHHHH--
Confidence 4699999955444433333222 22 345566666543321 111222334577 888888766555443
Q ss_pred HHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---c--CCcEEEEEecccccCCHHHH
Q 002314 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---A--GRKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 307 ~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~--~~~iIL~VdRld~~KGi~~~ 381 (937)
++ ...++.++|+|||.+.|.. .++++ . ++++|+++||+.+.||++.+
T Consensus 151 ---~~------------~~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 202 (413)
T 3oy2_A 151 ---YG------------CKVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202 (413)
T ss_dssp ---TT------------CCSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCSSGGGTHHHH
T ss_pred ---cC------------CCCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCCchhcCcHHH
Confidence 22 1357889999999987721 12233 2 57899999999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++||..+.+++|+++ |+++|.+..... ..+++.+++++.+.+..-...-+..|+++.|.++.+++..+|+.||
T Consensus 203 i~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~ad 275 (413)
T 3oy2_A 203 VLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACD 275 (413)
T ss_dssp HHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCC
Confidence 999999999999876 777775432211 1244566666665442100000002566789999999999999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCc---------------eE--EECCCCHHHHHHHHH
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAG---------------AI--LVNPWNITEVANAIA 522 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~---------------gl--lVnP~D~~~lA~aI~ 522 (937)
++|+||..||||++++|||||+ .|+|+|..+|..+.+ +.+ |+ +|+|.|++++|++|
T Consensus 276 v~v~pS~~E~~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i- 350 (413)
T 3oy2_A 276 VIVNCSSGEGFGLCSAEGAVLG----KPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF- 350 (413)
T ss_dssp EEEECCSCCSSCHHHHHHHTTT----CCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-
T ss_pred EEEeCCCcCCCCcHHHHHHHcC----CCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-
Confidence 9999999999999999999994 799999998888887 344 88 99999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHHHhHH
Q 002314 523 RALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTVV 564 (937)
Q Consensus 523 ~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~~~~ 564 (937)
+++++ ++++.++.+++++++ +.+++..+++++++.++++..
T Consensus 351 ~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 392 (413)
T 3oy2_A 351 TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLR 392 (413)
T ss_dssp HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC
T ss_pred HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 99984 567777888888887 578999999999998887654
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-22 Score=234.76 Aligned_cols=331 Identities=12% Similarity=0.039 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHHHHhC-CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccC----C----CchhhhccCc-------
Q 002314 213 AYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP----F----PSSEIHRTLP------- 276 (937)
Q Consensus 213 ~Y~~vN~~fA~~i~~~~-~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~P----f----Ps~e~fr~lp------- 276 (937)
.+.-+-..|.+.+...- ..+||+|+||||..++|.+||+..++++.+|+.|.- + -..+++..+.
T Consensus 162 ~F~y~~~avl~~l~~~~~~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~e 241 (725)
T 3nb0_A 162 LLGYTVAWFLGEVAHLDSQHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHE 241 (725)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChh
Confidence 33333444444443322 346999999999999999999999999999999974 1 0011111111
Q ss_pred -------cchH-HHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcC--
Q 002314 277 -------SRSD-LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-- 346 (937)
Q Consensus 277 -------~r~e-il~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~-- 346 (937)
..-. .-.++..||.|..-++.|++.-. .+++.. ...| ||||||++.|.+....
T Consensus 242 a~~~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~----~Ll~r~-----------~d~i--IpNGID~~~f~p~~~~~~ 304 (725)
T 3nb0_A 242 AGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAE----HLLKRK-----------PDGI--LPNGLNVIKFQAFHEFQN 304 (725)
T ss_dssp HHHTTCHHHHHHHHHHHHHSSEEEESSHHHHHHHH----HHTSSC-----------CSEE--CCCCBCCCCCSSTTHHHH
T ss_pred hhhhchhHHHHHHHHHHHhCCEEEECCHHHHHHHH----HHhcCC-----------CCEE--EcCCccccccCcchhhHH
Confidence 0111 23355688999998888776433 344321 1233 9999999998763110
Q ss_pred --CchHHHHH-HHHHHh-------cCCcEEEE-Eeccc-ccCCHHHHHHHHHHhHHhC--cCccCcEEEEEEEcCCCCCh
Q 002314 347 --NPVQVHIK-ELQETF-------AGRKVMLG-VDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDV 412 (937)
Q Consensus 347 --~~~~~~~~-~lr~~~-------~~~~iIL~-VdRld-~~KGi~~~l~Af~~ll~~~--P~~~~~v~Lvqi~~p~r~~~ 412 (937)
...++.++ .++..+ .+++++++ +||+. ..||++.+++|+.++...- -... +-++..|..|.+...
T Consensus 305 ~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~-~~vvafii~p~~~~~ 383 (725)
T 3nb0_A 305 LHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSK-KTVVAFIVMPAKNNS 383 (725)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCC-CEEEEEEECCCCEEE
T ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCC-CcEEEEEEeCCCCCC
Confidence 01111121 122222 24566666 79999 5799999999999987431 1111 223333444654333
Q ss_pred hH-----HHHHHHHHHHHH-------------------------------------------------------------
Q 002314 413 PE-----YQRLTSQVHEIV------------------------------------------------------------- 426 (937)
Q Consensus 413 ~~-----y~~l~~~l~~lv------------------------------------------------------------- 426 (937)
.. .+...+++++-+
T Consensus 384 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~ 463 (725)
T 3nb0_A 384 FTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIV 463 (725)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSB
T ss_pred CchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCee
Confidence 21 111111111111
Q ss_pred ----------------HHhhcccCCCCcccEEEeCCCCCHH------HHHHHHHHccEEEECCCCcCCChhHHHHHHhcC
Q 002314 427 ----------------GRINGRFGTLTAVPIHHLDRSLDFP------ALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 484 (937)
Q Consensus 427 ----------------~~IN~~~g~~~~~pV~~~~~~v~~~------el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~ 484 (937)
.+++-.=...+.+.|+|+.+.++.. ++..+|+.||+||+||++||||++++|||||+
T Consensus 464 TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G- 542 (725)
T 3nb0_A 464 THNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMG- 542 (725)
T ss_dssp SEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTT-
T ss_pred eeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcC-
Confidence 1111100112345688888888876 58999999999999999999999999999994
Q ss_pred CCCceEEEeCCCCccccc--C-------CceEEEC---CCCHHHHHHHHHHHH----cCCHHHHHHHHHhhhhhhhcCCH
Q 002314 485 LKKGVLILSEFAGAAQSL--G-------AGAILVN---PWNITEVANAIARAL----NMSPEEREKRHWHNFTHVTTHTA 548 (937)
Q Consensus 485 ~~~g~lVlSe~aG~~~~l--g-------~~gllVn---P~D~~~lA~aI~~aL----~m~~~er~~r~~~~~~~V~~~~~ 548 (937)
.|+|+|..+|+.+.+ + .+|++|. |.|+++++++|.++| .+++.+|..+..+.++....++|
T Consensus 543 ---~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSW 619 (725)
T 3nb0_A 543 ---VPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDW 619 (725)
T ss_dssp ---CCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBH
T ss_pred ---CCEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCH
Confidence 899999999998776 2 2588884 557766666666655 46777777777777778889999
Q ss_pred HHHHHHHHHHHHHhHHH
Q 002314 549 QEWAETFVSELNDTVVE 565 (937)
Q Consensus 549 ~~W~~~fl~~l~~~~~~ 565 (937)
..-++.+++..+.+...
T Consensus 620 e~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 620 KRMGLEYVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999888776543
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=228.93 Aligned_cols=275 Identities=17% Similarity=0.096 Sum_probs=208.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+|++|.+....++.++.+. .+.|+.+++|..++....+..+-. .+-..+-.+|.|.+.+....+.+.+ .+
T Consensus 107 ~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~----~~ 179 (406)
T 2gek_A 107 DFDVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQG--ILRPYHEKIIGRIAVSDLARRWQME----AL 179 (406)
T ss_dssp CCSEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHS--TTHHHHTTCSEEEESSHHHHHHHHH----HH
T ss_pred CCCEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHH--HHHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4699999998887765555544 368999999998876533221111 1114455799999999776665544 11
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecc-cccCCHHHHHHHHHHhH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRl-d~~KGi~~~l~Af~~ll 389 (937)
+ ..++ ++|+|||.+.|.+...... + -.++++|+++||+ .+.||+..+++|+..+.
T Consensus 180 ~-------------~~~~-vi~~~v~~~~~~~~~~~~~-------~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~ 235 (406)
T 2gek_A 180 G-------------SDAV-EIPNGVDVASFADAPLLDG-------Y---PREGRTVLFLGRYDEPRKGMAVLLAALPKLV 235 (406)
T ss_dssp S-------------SCEE-ECCCCBCHHHHHTCCCCTT-------C---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHH
T ss_pred C-------------CCcE-EecCCCChhhcCCCchhhh-------c---cCCCeEEEEEeeeCccccCHHHHHHHHHHHH
Confidence 1 1367 9999999998875421110 0 1256899999999 99999999999999999
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl- 468 (937)
+++|+++ |+++|. ++. . ++++++.++. ..|.+ .|.++.+++..+|+.||++|+||.
T Consensus 236 ~~~~~~~----l~i~G~-----~~~-~----~l~~~~~~~~--------~~v~~-~g~~~~~~~~~~~~~adv~v~ps~~ 292 (406)
T 2gek_A 236 ARFPDVE----ILIVGR-----GDE-D----ELREQAGDLA--------GHLRF-LGQVDDATKASAMRSADVYCAPHLG 292 (406)
T ss_dssp TTSTTCE----EEEESC-----SCH-H----HHHHHTGGGG--------GGEEE-CCSCCHHHHHHHHHHSSEEEECCCS
T ss_pred HHCCCeE----EEEEcC-----CcH-H----HHHHHHHhcc--------CcEEE-EecCCHHHHHHHHHHCCEEEecCCC
Confidence 8888754 776753 232 2 3334443321 13664 799999999999999999999997
Q ss_pred CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcC
Q 002314 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (937)
Q Consensus 469 ~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~ 546 (937)
.||||++++|||+|+ .|+|+|..+|..+.+ |.+|++++|.|+++++++|.++++++ +.+.++.+++++++..+
T Consensus 293 ~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~ 367 (406)
T 2gek_A 293 GESFGIVLVEAMAAG----TAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDD-QLRAGYVARASERVHRY 367 (406)
T ss_dssp CCSSCHHHHHHHHHT----CEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHGGGG
T ss_pred CCCCchHHHHHHHcC----CCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHhC
Confidence 999999999999994 799999988888777 56899999999999999999999854 56777778888888899
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 002314 547 TAQEWAETFVSELNDTVV 564 (937)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~ 564 (937)
++...++.+++.+++...
T Consensus 368 s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 368 DWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp BHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999888877543
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=229.10 Aligned_cols=279 Identities=17% Similarity=0.208 Sum_probs=200.4
Q ss_pred CCCEEEEeCcccchHHHHH-HhhC-CCCeEEEEEccCCCchhhhccCccchHHH-HhhhcCCEEEEeCHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCL-KEYN-SDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~L-r~~~-~~~~I~~flH~PfPs~e~fr~lp~r~eil-~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
..|+|++|+.....++.++ ++.. .++|+.+++|..++ ..+..-+....+. ..+-.+|.|.+.+....+.+..
T Consensus 99 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 173 (394)
T 2jjm_A 99 NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHE--- 173 (394)
T ss_dssp TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHH---
T ss_pred CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHH---
Confidence 4599999986644444443 3333 36899999997421 1111112222233 3344689999988866655443
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLA 384 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~A 384 (937)
.. +...++.++|+|||.+.|.+.. ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 174 -~~------------~~~~~~~vi~ngv~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 174 -LV------------KPNKDIQTVYNFIDERVYFKRD--------MTQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp -HT------------CCSSCEEECCCCCCTTTCCCCC--------CHHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred -hh------------CCcccEEEecCCccHHhcCCcc--------hHHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 11 1235788999999998886431 12344555 357899999999999999999999
Q ss_pred HHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
++.+.++ ++ +.|+++|. ++.. +++++++.+.+. . ..|.+ .|. .+++..+|+.||++|
T Consensus 233 ~~~l~~~-~~----~~l~i~G~-----g~~~----~~l~~~~~~~~l----~--~~v~~-~g~--~~~~~~~~~~adv~v 289 (394)
T 2jjm_A 233 FAKIVTE-VD----AKLLLVGD-----GPEF----CTILQLVKNLHI----E--DRVLF-LGK--QDNVAELLAMSDLML 289 (394)
T ss_dssp HHHHHHS-SC----CEEEEECC-----CTTH----HHHHHHHHTTTC----G--GGBCC-CBS--CSCTHHHHHTCSEEE
T ss_pred HHHHHhh-CC----CEEEEECC-----chHH----HHHHHHHHHcCC----C--CeEEE-eCc--hhhHHHHHHhCCEEE
Confidence 9998776 43 34776752 3333 344455544331 1 13443 453 578999999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (937)
+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++++|.|++++|++|.+++++ ++.+.++.++++++
T Consensus 290 ~ps~~e~~~~~~~EAma~G----~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 290 LLSEKESFGLVLLEAMACG----VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARES 364 (394)
T ss_dssp ECCSCCSCCHHHHHHHHTT----CCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred eccccCCCchHHHHHHhcC----CCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHH
Confidence 9999999999999999994 799999999988888 5789999999999999999999985 45677777888888
Q ss_pred h-hcCCHHHHHHHHHHHHHHhH
Q 002314 543 V-TTHTAQEWAETFVSELNDTV 563 (937)
Q Consensus 543 V-~~~~~~~W~~~fl~~l~~~~ 563 (937)
+ +.+++...++.+++.++++.
T Consensus 365 ~~~~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 365 VYEQFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp HHHHSCHHHHHHHHHHHHHHTC
T ss_pred HHHhCCHHHHHHHHHHHHHHHH
Confidence 8 88999999999998887654
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=191.56 Aligned_cols=190 Identities=21% Similarity=0.212 Sum_probs=149.7
Q ss_pred EecccChhhhh--hhhcCCchHHHHHHHHHHhc--CCcEEEEEeccc-ccCCHHHHHHHHHHhH--HhCcCccCcEEEEE
Q 002314 331 FPIGIDSERFI--RALEINPVQVHIKELQETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFL--EENSDWRGKVVLLQ 403 (937)
Q Consensus 331 ~P~GID~~~f~--~~~~~~~~~~~~~~lr~~~~--~~~iIL~VdRld-~~KGi~~~l~Af~~ll--~~~P~~~~~v~Lvq 403 (937)
+|+|||.+.|. +.. ....+....++++++ ++++|+++||+. +.||+..+++|+..+. +++|++ .|++
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~----~l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM----RFII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGE----EEEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCe----EEEE
Confidence 69999999997 532 112233456777774 667999999999 9999999999999997 777764 4777
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 404 i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
+|. ++. ++..++++++.+.+ .|+++.|.++.+++..+|+.||++|+||..||||++++|||+|+
T Consensus 76 ~G~-----~~~--~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGK-----GDP--ELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECC-----BCH--HHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECC-----CCh--HHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 753 220 23345556665533 36643899999999999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcC
Q 002314 484 DLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (937)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~ 546 (937)
.|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++|.+++++++.+++++++++|
T Consensus 140 ----~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 ----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp ----CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred ----CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 799999998888888 77899999999999999999999966777888888888777544
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-20 Score=200.96 Aligned_cols=195 Identities=15% Similarity=0.157 Sum_probs=126.8
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc--C
Q 002314 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N 661 (937)
Q Consensus 584 ~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~ 661 (937)
..|...+.|+|+||+||||++.. ...++++++++|++|.+ .|+.|+++|||+...+..++..+ .
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~ 79 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVKDG-------------SLLIDPEYMSVIDRLID-KGIIFVVCSGRQFSSEFKLFAPIKHK 79 (283)
T ss_dssp -----CCCCEEEECCBTTTBSTT-------------CSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred hhhhccCceEEEEeCcCCCCCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 46888999999999999999862 12689999999999987 59999999999999999999887 4
Q ss_pred ceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHH--H-----hcCCCceeee---------------------
Q 002314 662 LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYF--T-----ERTPRSHFEQ--------------------- 713 (937)
Q Consensus 662 l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~--~-----~~~~Gs~iE~--------------------- 713 (937)
.++|+.||+.+...+..... ...+.+....+.+.++.+ . ....+.+++.
T Consensus 80 ~~~I~~NGa~i~~~~~~i~~---~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (283)
T 3dao_A 80 LLYITDGGTVVRTPKEILKT---YPMDEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVD 156 (283)
T ss_dssp CEEEETTTTEEECSSCEEEE---CCCCHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECS
T ss_pred cEEEECCCcEEEECCEEEEE---ecCCHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcC
Confidence 68999999999864322111 123333333333333322 0 0011111110
Q ss_pred --------ecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccc
Q 002314 714 --------RETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSK 784 (937)
Q Consensus 714 --------K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~ 784 (937)
....+.+.. +++........+.+.+ . ..+.+ ..+..++||.|+++|||.||++++++++
T Consensus 157 ~l~~l~~~~~~ki~i~~---~~~~~~~~~~~l~~~~-----~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg--- 224 (283)
T 3dao_A 157 DITRLDRNDIIKFTVFH---PDKCEELCTPVFIPAW-----N-KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFD--- 224 (283)
T ss_dssp CGGGCCCSCCCEEEEEC---SSCHHHHHTTTHHHHH-----T-TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTT---
T ss_pred CHHHcCccCceEEEEEc---ChHHHHHHHHHHHHHh-----c-CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhC---
Confidence 001111110 0110001112222333 1 13454 5678899999999999999999999998
Q ss_pred cCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 785 KMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 785 ~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
++++++++||| +.||++||+.++
T Consensus 225 ---i~~~e~ia~GD-~~NDi~ml~~ag 247 (283)
T 3dao_A 225 ---LLPDEVCCFGD-NLNDIEMLQNAG 247 (283)
T ss_dssp ---CCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred ---CCHHHEEEECC-CHHHHHHHHhCC
Confidence 67899999999 999999999873
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.7e-21 Score=211.57 Aligned_cols=239 Identities=14% Similarity=0.009 Sum_probs=181.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+||+|.++..++. .+..+.| .+++|..++... .+|.|.+.+....+.+.+
T Consensus 84 ~~Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~~------ 136 (342)
T 2iuy_A 84 DVDVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCGG------ 136 (342)
T ss_dssp CCSEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTTC------
T ss_pred CCCEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHhc------
Confidence 5699999998765433 2345788 899998876321 188888888755443221
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
..++.++|+|||.+.|.+... ...++++|+++||+.+.||+..+++|++.+
T Consensus 137 --------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-- 187 (342)
T 2iuy_A 137 --------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGALEAAAFAHAC-- 187 (342)
T ss_dssp --------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHHHHHHHHHHH--
T ss_pred --------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHHHHHHHHHhc--
Confidence 235668999999988865321 123567899999999999999999999886
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC--
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-- 468 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-- 468 (937)
+ +.|+++|.+ +.. +++++++.+++ ..|+| .|.++.+++..+|+.||++|+||.
T Consensus 188 ---~----~~l~i~G~g-----~~~----~~l~~~~~~~~--------~~v~~-~g~~~~~~l~~~~~~adv~v~ps~~~ 242 (342)
T 2iuy_A 188 ---G----RRLVLAGPA-----WEP----EYFDEITRRYG--------STVEP-IGEVGGERRLDLLASAHAVLAMSQAV 242 (342)
T ss_dssp ---T----CCEEEESCC-----CCH----HHHHHHHHHHT--------TTEEE-CCCCCHHHHHHHHHHCSEEEECCCCC
T ss_pred ---C----cEEEEEeCc-----ccH----HHHHHHHHHhC--------CCEEE-eccCCHHHHHHHHHhCCEEEECCccc
Confidence 3 337767532 222 33444554443 14664 899999999999999999999999
Q ss_pred --------CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc----CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 002314 469 --------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (937)
Q Consensus 469 --------~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (937)
.||||++++|||||+ .|+|+|..+|..+.+ |.+|++++| |++++|++|.++++ .
T Consensus 243 ~~~~~~~~~E~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~---------~ 308 (342)
T 2iuy_A 243 TGPWGGIWCEPGATVVSEAAVSG----TPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA---------S 308 (342)
T ss_dssp CCTTCSCCCCCCCHHHHHHHHTT----CCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC---------H
T ss_pred ccccccccccCccHHHHHHHhcC----CCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH---------H
Confidence 899999999999994 799999998888888 347999999 99999999999987 2
Q ss_pred Hhhhhhh-hcCCHHHHHHHHHHHHHHhHH
Q 002314 537 WHNFTHV-TTHTAQEWAETFVSELNDTVV 564 (937)
Q Consensus 537 ~~~~~~V-~~~~~~~W~~~fl~~l~~~~~ 564 (937)
+++++++ +.+++...++++++.++++..
T Consensus 309 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 309 DEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp HHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 3345555 778999999999888877643
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=217.22 Aligned_cols=228 Identities=13% Similarity=0.153 Sum_probs=176.3
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 002314 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (937)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (937)
.+|.|.+.+....+.|.+ .+|. ...++.++|+|||.+.|.+.... .....+++++ .++
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~~-----------~~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 196 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQT-----------EPERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGIKEQQ 196 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCC-----------CGGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTCCTTC
T ss_pred CCcEEEEcCHHHHHHHHH----HhCC-----------ChhheEEecCCcCHHhcCcccch----hHHHHHHHHhCCCCCC
Confidence 589999999877666653 1222 23578899999999988765322 1234566666 367
Q ss_pred cEEEEEecccccCCHHHHHHHHHHhHHh-CcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 002314 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (937)
Q Consensus 364 ~iIL~VdRld~~KGi~~~l~Af~~ll~~-~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (937)
++|+++||+.+.||+..+++|+..+.++ +|+ +.|+++|.+. . +++++++.+.+.. ..|+
T Consensus 197 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~---~-------~~~~~~~~~~~~~------~~v~ 256 (374)
T 2iw1_A 197 NLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK---P-------RKFEALAEKLGVR------SNVH 256 (374)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC---C-------HHHHHHHHHHTCG------GGEE
T ss_pred eEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC---H-------HHHHHHHHHcCCC------CcEE
Confidence 8999999999999999999999998776 455 4577776421 1 2333444443311 2466
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEEC-CCCHHHHHH
Q 002314 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-PWNITEVAN 519 (937)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVn-P~D~~~lA~ 519 (937)
++ |. .+++..+|+.||++|+||..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++ |.|++++++
T Consensus 257 ~~-g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~ 329 (374)
T 2iw1_A 257 FF-SG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNE 329 (374)
T ss_dssp EE-SC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHH
T ss_pred EC-CC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC----CCEEEecCCCchhhhccCCceEEeCCCCCHHHHHH
Confidence 54 54 4789999999999999999999999999999994 799999999988887 57899998 999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 520 AIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 520 aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
+|.+++++ ++.+.++.+++++++.++++..|++.+.+.++.
T Consensus 330 ~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 330 VLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred HHHHHHcC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999985 456777788889999999999999988877664
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-20 Score=198.17 Aligned_cols=195 Identities=15% Similarity=0.174 Sum_probs=131.9
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc----CceEE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLA 665 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~----~l~li 665 (937)
+.||||+|+||||++. ...++++++++|++|.+ .|+.|+|+|||++..+.+.++.. ..++|
T Consensus 3 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i 67 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPP--------------RLCQTDEMRALIKRARG-AGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVF 67 (246)
T ss_dssp CSEEEEECSBTTTBST--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CceEEEEeCcCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHhhhhccccCCEEE
Confidence 4799999999999986 34688999999999987 59999999999999998888741 25799
Q ss_pred eeCceEEEecCCe-eeeccccccChhHHHHHHHHHHHHH-----hcCCCceeeeecceEEEE--eeccCh----hhhHH-
Q 002314 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWN--YKYADV----EFGRI- 732 (937)
Q Consensus 666 aenG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~-----~~~~Gs~iE~K~~sl~~h--yr~ad~----e~~~~- 732 (937)
++||+.+...++. |...++...+.++...+.+.++.+. ....+.+++.+...+.+. .+.... .+...
T Consensus 68 ~~NGa~i~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (246)
T 3f9r_A 68 AENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYD 147 (246)
T ss_dssp EGGGTEEEETTEEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHH
T ss_pred ECCCcEEEECCEEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEec
Confidence 9999999875332 3332211133444444444444332 123467777665544431 111111 01100
Q ss_pred ----HHHHHHHHHhcCCCCCCCeE-EEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCC----CCc
Q 002314 733 ----QARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL----GKD 803 (937)
Q Consensus 733 ----~a~el~~~L~~~~~~~~~v~-v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d----~nD 803 (937)
...++.+.+ .+.+.+..+. +.+|..++||+|+|+|||.||++|++ . .++++|||| + .||
T Consensus 148 ~~~~~~~~~~~~l-~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~--~--------~~ev~afGD-~~~~g~ND 215 (246)
T 3f9r_A 148 NEHRVRASLIAEL-ENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED--D--------FEEIHFFGD-KTQEGGND 215 (246)
T ss_dssp HHHCHHHHHHHHH-HHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT--T--------CSEEEEEES-CCSTTSTT
T ss_pred ccchHHHHHHHHH-HhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc--C--------cccEEEEeC-CCCCCCCC
Confidence 012334444 3223332355 45688999999999999999999987 3 689999999 8 999
Q ss_pred HHHHHhcC
Q 002314 804 EDVYAFFE 811 (937)
Q Consensus 804 EdMf~~~~ 811 (937)
++||++++
T Consensus 216 i~Ml~~a~ 223 (246)
T 3f9r_A 216 YEIYTDKR 223 (246)
T ss_dssp HHHHTCTT
T ss_pred HHHHhCCC
Confidence 99998663
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-20 Score=200.94 Aligned_cols=194 Identities=18% Similarity=0.240 Sum_probs=124.6
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--
Q 002314 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-- 661 (937)
Q Consensus 584 ~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-- 661 (937)
.+|...+.|+|+||+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+..++..++
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLSP--------------DHFLTPYAKETLKLLTA-RGINFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp -------CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHT-TTCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred cccccCcceEEEEeCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHhcCCC
Confidence 5689999999999999999986 35689999999999986 699999999999999999888774
Q ss_pred ceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCcee--eeecc--------e--------------
Q 002314 662 LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--EQRET--------S-------------- 717 (937)
Q Consensus 662 l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~i--E~K~~--------s-------------- 717 (937)
.++|+.||+.+...++..... ...+. +.+.++++.+.. ..+..+ ..... .
T Consensus 79 ~~~I~~nGa~i~~~~~~~l~~--~~l~~---~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (285)
T 3pgv_A 79 SYMITSNGARVHDSDGQQIFA--HNLDR---DIAADLFEIVRN-DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKL 152 (285)
T ss_dssp CEEEEGGGTEEECTTSCEEEE--CCCCH---HHHHHHTTTTTT-CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEE
T ss_pred ccEEEcCCeEEECCCCCEEEe--cCCCH---HHHHHHHHHHhh-cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEE
Confidence 578999999998533332111 12332 334444442211 111111 00000 0
Q ss_pred -----------EEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhccccc
Q 002314 718 -----------LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKK 785 (937)
Q Consensus 718 -----------l~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~ 785 (937)
..+-+...+++. ..++.+.+ ...+. ..+.++ .+..++||.|++++||.||++|+++++
T Consensus 153 ~~~~~~~~~~i~ki~~~~~~~~~----~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg---- 222 (285)
T 3pgv_A 153 YEPGELDPQGISKVFFTCEDHEH----LLPLEQAM-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLG---- 222 (285)
T ss_dssp CCTTCSCCSSEEEEEEECSCHHH----HHHHHHHH-HHHHG-GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTT----
T ss_pred ecHHHcCCCCceEEEEeCCCHHH----HHHHHHHH-HHHhc-CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhC----
Confidence 000011112221 22233333 11111 135544 468899999999999999999999998
Q ss_pred CCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 786 MKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 786 ~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
++++++++||| +.||++||+.++
T Consensus 223 --i~~~~~ia~GD-~~NDi~ml~~ag 245 (285)
T 3pgv_A 223 --YTLSDCIAFGD-GMNDAEMLSMAG 245 (285)
T ss_dssp --CCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred --CCHHHEEEECC-cHhhHHHHHhcC
Confidence 67899999999 999999999984
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.83 E-value=4e-19 Score=195.35 Aligned_cols=186 Identities=15% Similarity=0.257 Sum_probs=128.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChh-HHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEe
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPD-LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~-~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~lia 666 (937)
..|+|+||+||||++.. ..+++. +.++|++|.+ .|+.|+++|||+...+..++..++ .++|+
T Consensus 36 ~iKli~fDlDGTLld~~--------------~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~ 100 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNSK--------------GSYDHNRFQRILKQLQE-RDIRFVVASSNPYRQLREHFPDCHEQLTFVG 100 (304)
T ss_dssp CCSEEEECCCCCCSCTT--------------SCCCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHTTCTTTGGGSEEEE
T ss_pred eeEEEEEeCCCCCCCCC--------------CccCHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhCCCCcEEe
Confidence 57999999999999863 457788 8999999987 599999999999999999988774 68999
Q ss_pred eCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCC----------ceeee-----------------------
Q 002314 667 ENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPR----------SHFEQ----------------------- 713 (937)
Q Consensus 667 enG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~G----------s~iE~----------------------- 713 (937)
.||+.+...+..... ...+.+ .+.++++.+.+..++ .++..
T Consensus 101 ~nGa~i~~~~~~i~~---~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (304)
T 3l7y_A 101 ENGANIISKNQSLIE---VFQQRE---DIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSF 174 (304)
T ss_dssp GGGTEEEETTEEEEE---CCCCHH---HHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCC
T ss_pred CCCcEEEECCEEEEE---ecCCHH---HHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCH
Confidence 999999754332211 123333 334444444332111 11100
Q ss_pred ------ecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccC
Q 002314 714 ------RETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKM 786 (937)
Q Consensus 714 ------K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~ 786 (937)
+-..+.+.. +++ ...++.+.+ ...+....+.++ .+..++||.|++++||.||++++++++
T Consensus 175 ~~~~~~~~~ki~~~~---~~~----~~~~~~~~l-~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg----- 241 (304)
T 3l7y_A 175 SPLPDERFFKLTLQV---KEE----ESAQIMKAI-ADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWN----- 241 (304)
T ss_dssp SSCC-CCEEEEEEEC---CGG----GHHHHHHHH-HTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTT-----
T ss_pred HHcCcCCeEEEEEEc---CHH----HHHHHHHHH-HHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhC-----
Confidence 001111111 111 124455555 433332136654 467899999999999999999999998
Q ss_pred CCCCceEEEEecCCCCcHHHHHhcC
Q 002314 787 KTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 787 ~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
++++++++||| +.||++||+.++
T Consensus 242 -i~~~e~i~~GD-s~NDi~m~~~ag 264 (304)
T 3l7y_A 242 -FTSDHLMAFGD-GGNDIEMLKLAK 264 (304)
T ss_dssp -CCGGGEEEEEC-SGGGHHHHHHCT
T ss_pred -cCHHHEEEECC-CHHHHHHHHhcC
Confidence 67899999999 999999999874
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.4e-19 Score=191.01 Aligned_cols=192 Identities=16% Similarity=0.133 Sum_probs=125.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC-----ceE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-----LWL 664 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-----l~l 664 (937)
+.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++
T Consensus 4 ~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 68 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTNS--------------KKEISSRNRETLIRIQE-QGIRLVLASGRPTYGIVPLANELRMNEFGGFI 68 (279)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTGGGTTCEE
T ss_pred cceEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHhCCCCCCCEE
Confidence 4789999999999986 34689999999999987 599999999999999999888775 578
Q ss_pred EeeCceEEEec-CCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEE----------------EEeeccCh
Q 002314 665 AAENGMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV----------------WNYKYADV 727 (937)
Q Consensus 665 iaenG~~ir~~-~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~----------------~hyr~ad~ 727 (937)
|+.||+.+... .+..... ...+.+....+.+.++.+ .-...+........ +.+...+
T Consensus 69 i~~nGa~i~~~~~~~~~~~--~~l~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 142 (279)
T 4dw8_A 69 LSYNGGEIINWESKEMMYE--NVLPNEVVPVLYECARTN---HLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETN- 142 (279)
T ss_dssp EEGGGTEEEETTTCCEEEE--CCCCGGGHHHHHHHHHHT---TCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECS-
T ss_pred EEeCCeEEEECCCCeEEEE--ecCCHHHHHHHHHHHHHc---CCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHH-
Confidence 99999999852 2222111 123333333333333322 10011111000000 0000000
Q ss_pred hh---------------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCc
Q 002314 728 EF---------------GRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAID 791 (937)
Q Consensus 728 e~---------------~~~~a~el~~~L~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d 791 (937)
++ ......++.+.+ ...+.. .+.+ ..+..++|+.|.++|||.|+++++++++ ++++
T Consensus 143 ~~~~~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~ 214 (279)
T 4dw8_A 143 DFLTDITLPVAKCLIVGDAGKLIPVESEL-CIRLQG-KINVFRSEPYFLELVPQGIDKALSLSVLLENIG------MTRE 214 (279)
T ss_dssp CHHHHSCSCCSCEEEESCHHHHHHHHHHH-HHHTTT-TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGG
T ss_pred HHHHhhcCCceEEEEeCCHHHHHHHHHHH-HHHhcC-CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcC------CCHH
Confidence 00 001223333443 211211 3444 4568899999999999999999999998 6789
Q ss_pred eEEEEecCCCCcHHHHHhcC
Q 002314 792 YVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 792 ~vl~iGD~d~nDEdMf~~~~ 811 (937)
++++||| +.||++||+.++
T Consensus 215 ~~i~~GD-~~NDi~m~~~ag 233 (279)
T 4dw8_A 215 EVIAIGD-GYNDLSMIKFAG 233 (279)
T ss_dssp GEEEEEC-SGGGHHHHHHSS
T ss_pred HEEEECC-ChhhHHHHHHcC
Confidence 9999999 999999999874
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=188.97 Aligned_cols=188 Identities=15% Similarity=0.230 Sum_probs=126.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEee
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liae 667 (937)
+.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|+.
T Consensus 5 ~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~ 69 (290)
T 3dnp_A 5 SKQLLALNIDGALLRS--------------NGKIHQATKDAIEYVKK-KGIYVTLVTNRHFRSAQKIAKSLKLDAKLITH 69 (290)
T ss_dssp -CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEG
T ss_pred cceEEEEcCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCCeEEEc
Confidence 4689999999999986 34689999999999987 599999999999999988888774 389999
Q ss_pred CceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEE-------------------------EEe
Q 002314 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV-------------------------WNY 722 (937)
Q Consensus 668 nG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~-------------------------~hy 722 (937)
||+.+....+.+... ...+ .+.+.++++.+.+..-...+........ ..+
T Consensus 70 nGa~i~~~~~~~~~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (290)
T 3dnp_A 70 SGAYIAEKIDAPFFE--KRIS---DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFV 144 (290)
T ss_dssp GGTEEESSTTSCSEE--CCCC---HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEEC
T ss_pred CCeEEEcCCCCEEEe--cCCC---HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhcccccccccccccc
Confidence 999998533322111 1123 3445566665544211111111110000 000
Q ss_pred e------------------ccChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhccc
Q 002314 723 K------------------YADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHS 783 (937)
Q Consensus 723 r------------------~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~ 783 (937)
. ..+++. ..++...+ .... ..+.++ .+..++||.|.+++||.||++++++++
T Consensus 145 ~~~~~~~~~~~~~~~ki~~~~~~~~----~~~~~~~l-~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg-- 215 (290)
T 3dnp_A 145 ESLSDLLMDEPVSAPVIEVYTEHDI----QHDITETI-TKAF--PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELG-- 215 (290)
T ss_dssp SCHHHHHHHSCCCCSEEEEECCGGG----HHHHHHHH-HHHC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT--
T ss_pred CCHHHHHhcCCCCceEEEEeCCHHH----HHHHHHHH-HhhC--CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcC--
Confidence 0 001111 12233322 1111 245544 478999999999999999999999998
Q ss_pred ccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 784 KKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 784 ~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
++++++++||| +.||++||+.++
T Consensus 216 ----i~~~~~i~~GD-~~NDi~m~~~ag 238 (290)
T 3dnp_A 216 ----LSMDDVVAIGH-QYDDLPMIELAG 238 (290)
T ss_dssp ----CCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred ----CCHHHEEEECC-chhhHHHHHhcC
Confidence 67899999999 999999999874
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.80 E-value=7.4e-19 Score=190.79 Aligned_cols=184 Identities=15% Similarity=0.145 Sum_probs=123.2
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc---eEEe
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 666 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l---~lia 666 (937)
+.+|||+|+||||++.. ..++++++++|++|.+ .|+.|+|+|||+...+..++..+++ ++|+
T Consensus 8 ~~~li~~DlDGTLl~~~--------------~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~ 72 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIA 72 (275)
T ss_dssp CCEEEEEECTTTTSCSS--------------CCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEE
T ss_pred CceEEEEeCCCCCCCCC--------------CcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEE
Confidence 56999999999999852 2356778999999987 5999999999999999999988743 6999
Q ss_pred eCceEEE-ecCCe-------eeeccccccChhHHHHHHHHHHHHHhcCCCcee-e-----------------------ee
Q 002314 667 ENGMFLR-CTTGK-------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-E-----------------------QR 714 (937)
Q Consensus 667 enG~~ir-~~~~~-------w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~i-E-----------------------~K 714 (937)
+||+++. ..++. +... .+.+ .+.++++.+.......+. . .+
T Consensus 73 ~NGa~i~~~~~~~~~~~~~~~~~~----l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (275)
T 1xvi_A 73 ENGAVIQLAEQWQEIDGFPRIISG----ISHG---EISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLH 145 (275)
T ss_dssp GGGTEEECCTTCTTSTTTTEEECS----SCHH---HHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCC
T ss_pred eCCCeEEecCcccccCceEEEecC----CCHH---HHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhh
Confidence 9999997 33211 2222 2322 333333332211010000 0 00
Q ss_pred cceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhc-ccccCCCCCce-
Q 002314 715 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIV-HSKKMKTAIDY- 792 (937)
Q Consensus 715 ~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~-~~~~~~~~~d~- 792 (937)
.....+++. .+++ ...++.+.+ .. ..+.++.+..++||.|++++||.|+++++++++ . +.++
T Consensus 146 ~~~~~~~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~~~~------~~~~~ 209 (275)
T 1xvi_A 146 EASVTLIWR-DSDE----RMAQFTARL-NE----LGLQFMQGARFWHVLDASAGKDQAANWIIATYQQL------SGKRP 209 (275)
T ss_dssp SSCEEEEEC-SCHH----HHHHHHHHH-HH----TTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHH------HSSCC
T ss_pred ccCceeEec-CCHH----HHHHHHHHH-Hh----hCeEEEECCceEEEecCCCCHHHHHHHHHHHhhhc------ccccC
Confidence 111122332 1221 122334444 22 246777777899999999999999999999987 6 3577
Q ss_pred -EEEEecCCCCcHHHHHhcCc
Q 002314 793 -VLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 793 -vl~iGD~d~nDEdMf~~~~~ 812 (937)
+++||| +.||++||+.++.
T Consensus 210 ~~~~~GD-~~nD~~m~~~ag~ 229 (275)
T 1xvi_A 210 TTLGLGD-GPNDAPLLEVMDY 229 (275)
T ss_dssp EEEEEES-SGGGHHHHHTSSE
T ss_pred cEEEECC-ChhhHHHHHhCCc
Confidence 999999 9999999998753
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-18 Score=200.90 Aligned_cols=258 Identities=10% Similarity=0.065 Sum_probs=163.1
Q ss_pred CCCEEEEeCcccchHHHHHH----hh--CCCCeEEEEEccCCCchhhhccCccchHHHHhhhc-CC--EEEEeCHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLK----EY--NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLA-AD--LVGFHTYDYARH 301 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr----~~--~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~-aD--lIgF~t~~~~~~ 301 (937)
..|+|+.|.+........+. .. ....+..+++|.-+|. |........+.+.+.. ++ .+...+....+.
T Consensus 132 ~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~vi~~S~~~~~~ 208 (413)
T 2x0d_A 132 KHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPG---FYQWSSQYVLAESTYKYRGPQIAVFNSELLKQY 208 (413)
T ss_dssp TTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGG---GSCSSHHHHHHHHTTSCCSCEEEEEESHHHHHH
T ss_pred CCCEEEEehHHHHHHHHHhhhhhhhhcccccCcEEEEEeechhh---cCccChHHHHHHHHhccCCceEEEEcCHHHHHH
Confidence 46898888754333333321 10 2355677777764431 1111111122333332 33 355556544443
Q ss_pred HHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecc-cccCCHHH
Q 002314 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQ 380 (937)
Q Consensus 302 Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRl-d~~KGi~~ 380 (937)
+.+ .|.. ..++.++|+|+|.+.|..... ...++++|+++||+ .+.||++.
T Consensus 209 l~~-----~g~~-----------~~~~~~i~~g~d~~~~~~~~~-------------~~~~~~~il~~gr~~~~~Kg~~~ 259 (413)
T 2x0d_A 209 FNN-----KGYN-----------FTDEYFFQPKINTTLKNYIND-------------KRQKEKIILVYGRPSVKRNAFTL 259 (413)
T ss_dssp HHH-----HTCC-----------CSEEEEECCCCCHHHHTTTTS-------------CCCCCSEEEEEECTTCGGGCHHH
T ss_pred HHH-----cCCC-----------CCceEEeCCCcCchhhccccc-------------ccCCCCEEEEEecCchhccCHHH
Confidence 322 1211 125788999999987753210 11356789999997 68999999
Q ss_pred HHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 002314 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (937)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (937)
+|+||..+.+++|+. .++.|+++|.+.. . .+.+.. ..|+| .|.++.+++..+|+.|
T Consensus 260 li~A~~~l~~~~~~~-~~~~l~ivG~~~~-~-------------------~~l~~~--~~v~f-~G~~~~~~l~~~~~~a 315 (413)
T 2x0d_A 260 IVEALKIFVQKYDRS-NEWKIISVGEKHK-D-------------------IALGKG--IHLNS-LGKLTLEDYADLLKRS 315 (413)
T ss_dssp HHHHHHHHHHHCTTG-GGCEEEEEESCCC-C-------------------EEEETT--EEEEE-EESCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCC-CceEEEEEcCCch-h-------------------hhcCCc--CcEEE-cCCCCHHHHHHHHHhC
Confidence 999999998888862 1245777774221 0 011111 24664 7899999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHh
Q 002314 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (937)
Q Consensus 461 Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 538 (937)
|+||+||.+||||++++|||||+ .|+|++ .+|..+.+ |.+|++|+|.|++++|++|.++++++. .+++ +
T Consensus 316 dv~v~pS~~E~~g~~~lEAmA~G----~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~-~~~~---~ 386 (413)
T 2x0d_A 316 SIGISLMISPHPSYPPLEMAHFG----LRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN-NRDV---D 386 (413)
T ss_dssp CEEECCCSSSSCCSHHHHHHHTT----CEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC---------
T ss_pred CEEEEecCCCCCCcHHHHHHhCC----CcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH-HHHH---h
Confidence 99999999999999999999994 677764 56776666 678999999999999999999998663 2332 3
Q ss_pred hhhhhhcCCHHHHHH
Q 002314 539 NFTHVTTHTAQEWAE 553 (937)
Q Consensus 539 ~~~~V~~~~~~~W~~ 553 (937)
+++.+..++|..-++
T Consensus 387 ~~~~~~~~~W~~~~~ 401 (413)
T 2x0d_A 387 KKESSNMMFYINEFN 401 (413)
T ss_dssp --CCBSCGGGCCCC-
T ss_pred HHHHHHhCCHHHHHH
Confidence 455566666554433
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=188.21 Aligned_cols=194 Identities=13% Similarity=0.208 Sum_probs=125.8
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc-----eEE
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WLA 665 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-----~li 665 (937)
.||||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++ ++|
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~aL~~l~~-~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I 69 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI 69 (282)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEE
T ss_pred ceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEE
Confidence 589999999999986 35689999999999987 5999999999999999988887743 699
Q ss_pred eeCceEEEec-CCeeeeccccccChhHHHHHHHHHHHHHh----cC-CCceeeeec---c--------eEEEEeeccChh
Q 002314 666 AENGMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTE----RT-PRSHFEQRE---T--------SLVWNYKYADVE 728 (937)
Q Consensus 666 aenG~~ir~~-~~~w~~~~~~~~~~~w~~~v~~il~~~~~----~~-~Gs~iE~K~---~--------sl~~hyr~ad~e 728 (937)
++||+.+... ++... .....+.++...+.+.++.+-- .+ .+.+++.+. . .+...+...+ +
T Consensus 70 ~~NGa~i~~~~~~~~i--~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 146 (282)
T 1rkq_A 70 TYNGALVQKAADGSTV--AQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAE-K 146 (282)
T ss_dssp EGGGTEEEETTTCCEE--EECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGG-G
T ss_pred EeCCeEEEECCCCeEE--EEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchh-H
Confidence 9999999862 23221 1122344444444444443210 01 122222110 0 0000000000 0
Q ss_pred h-------------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEE
Q 002314 729 F-------------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (937)
Q Consensus 729 ~-------------~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl 794 (937)
+ ......++.+.+ ...+. ..+.++ .+..++||.|++++||.|++.++++++ +++++++
T Consensus 147 ~~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~~ 218 (282)
T 1rkq_A 147 MDPNTQFLKVMMIDEPAILDQAIARI-PQEVK-EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKPEEIM 218 (282)
T ss_dssp SCTTCCBCEEEEECCHHHHHHHHHHS-CHHHH-HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCGGGEE
T ss_pred hcccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhC------CCHHHEE
Confidence 0 001122333333 11010 135544 578899999999999999999999998 5689999
Q ss_pred EEecCCCCcHHHHHhcC
Q 002314 795 CIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 795 ~iGD~d~nDEdMf~~~~ 811 (937)
+||| +.||.+||+.++
T Consensus 219 ~~GD-~~nD~~m~~~ag 234 (282)
T 1rkq_A 219 AIGD-QENDIAMIEYAG 234 (282)
T ss_dssp EEEC-SGGGHHHHHHSS
T ss_pred EECC-cHHHHHHHHHCC
Confidence 9999 999999999874
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=9.9e-19 Score=188.34 Aligned_cols=202 Identities=20% Similarity=0.240 Sum_probs=122.4
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc----
Q 002314 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE---- 659 (937)
Q Consensus 584 ~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~---- 659 (937)
.+|+..+.||||+|+||||++. +..++++++++|++|.+ . +.|+|+|||++..+.+.++.
T Consensus 6 ~~~~~~~~kli~~DlDGTLl~~--------------~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~ 69 (262)
T 2fue_A 6 QAARRKERVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDEV 69 (262)
T ss_dssp -------CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTTH
T ss_pred ccccccCeEEEEEeCccCCCCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhcc
Confidence 4567778899999999999986 34689999999999975 5 99999999999999888875
Q ss_pred c--CceEEeeCceEEEecCCe-eeeccccccChhHHHHHHHHHHHHH-----hcCCCceeeeecceEEEE-e-eccChh-
Q 002314 660 Y--NLWLAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWN-Y-KYADVE- 728 (937)
Q Consensus 660 ~--~l~liaenG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~-----~~~~Gs~iE~K~~sl~~h-y-r~ad~e- 728 (937)
+ ..++|++||+.+...++. |...++...+.+....+.+.++.+. ....+.+++.+...+.+. + +..+.+
T Consensus 70 ~~~~~~~I~~NGa~i~~~~~~i~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (262)
T 2fue_A 70 IEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEE 149 (262)
T ss_dssp HHHCSEEEEGGGTEEEETTEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHH
T ss_pred cccCCeEEECCCcEEEeCCeEEEEeeccccCCHHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccc
Confidence 2 247899999999863321 1111000012222333333333221 112344444332222221 1 111111
Q ss_pred ---hhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecC
Q 002314 729 ---FGR-----IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF 799 (937)
Q Consensus 729 ---~~~-----~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~ 799 (937)
+.. ....++.+.+ ...+....+.+.. +..++||.|+++|||.||++| ++ ++.++++||||.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~g------i~~~~viafGDs 219 (262)
T 2fue_A 150 RIEFSELDKKEKIREKFVEAL-KTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---DQ------DSFDTIHFFGNE 219 (262)
T ss_dssp HHHHHHHHHHHCHHHHHHHHH-HHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---TT------SCCSEEEEEESC
T ss_pred cccEEEEcCCHHHHHHHHHHH-HHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---HC------CCHHHEEEECCC
Confidence 000 0112233333 2222222466654 577999999999999999999 66 578999999994
Q ss_pred ---CCCcHHHHHhcC
Q 002314 800 ---LGKDEDVYAFFE 811 (937)
Q Consensus 800 ---d~nDEdMf~~~~ 811 (937)
+.||++||+.++
T Consensus 220 ~~~~~NDi~Ml~~~~ 234 (262)
T 2fue_A 220 TSPGGNDFEIFADPR 234 (262)
T ss_dssp CSTTSTTHHHHHSTT
T ss_pred CCCCCCCHHHHhcCc
Confidence 589999999865
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=191.73 Aligned_cols=197 Identities=14% Similarity=0.167 Sum_probs=124.6
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHh--cccC------
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF--QEYN------ 661 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~--~~~~------ 661 (937)
..||||+|+||||++.. +..++++++++|++|.+ .|+.|+|+|||++..+..++ ..++
T Consensus 26 ~ikli~~DlDGTLl~~~-------------~~~is~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~ 91 (301)
T 2b30_A 26 DIKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFYG 91 (301)
T ss_dssp CCCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCCS
T ss_pred cccEEEEECCCCCcCCC-------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHhhHHhhcccccCC
Confidence 46899999999999861 24588999999999987 59999999999999999888 6554
Q ss_pred ceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHh-------cCCCceeeee-cce--------EEEEeecc
Q 002314 662 LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTE-------RTPRSHFEQR-ETS--------LVWNYKYA 725 (937)
Q Consensus 662 l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~-------~~~Gs~iE~K-~~s--------l~~hyr~a 725 (937)
.++|++||+.+...++..... ...+.+....+.+.++...- ...+.+++.. ... ..++++..
T Consensus 92 ~~~I~~NGa~i~~~~~~~i~~--~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 169 (301)
T 2b30_A 92 MPGVYINGTIVYDQIGYTLLD--ETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIR 169 (301)
T ss_dssp CSEEEGGGTEEECTTCCEEEE--CCCCHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEEC
T ss_pred CeEEEcCCeEEEeCCCCEEEE--ccCCHHHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeec
Confidence 469999999998622222111 12333333333333332100 0011111110 000 00111111
Q ss_pred Chhhh-------------HHHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCc
Q 002314 726 DVEFG-------------RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAID 791 (937)
Q Consensus 726 d~e~~-------------~~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d 791 (937)
+.++. .....++.+.+ ...+. ..+.++. +..++||.|++++||.|++.+++.++ ++++
T Consensus 170 ~~~~~~~~~i~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~ 241 (301)
T 2b30_A 170 HNEMLKYRTMNKLMIVLDPSESKTVIGNL-KQKFK-NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYN------ISND 241 (301)
T ss_dssp HHHHTTCCCCSEEEECCCTTTHHHHHHHH-HHHST-TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTT------CCGG
T ss_pred chhhhccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcC------CCHH
Confidence 00000 00122333333 22111 2466654 67899999999999999999999998 5689
Q ss_pred eEEEEecCCCCcHHHHHhcC
Q 002314 792 YVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 792 ~vl~iGD~d~nDEdMf~~~~ 811 (937)
++++||| +.||++||+.++
T Consensus 242 ~~~~~GD-~~nD~~m~~~ag 260 (301)
T 2b30_A 242 QVLVVGD-AENDIAMLSNFK 260 (301)
T ss_dssp GEEEEEC-SGGGHHHHHSCS
T ss_pred HEEEECC-CHHHHHHHHHcC
Confidence 9999999 999999999864
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=7.9e-19 Score=189.72 Aligned_cols=189 Identities=13% Similarity=0.196 Sum_probs=113.3
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc-----eE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-----~l 664 (937)
+.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..+++ ++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 68 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLNE--------------KNELAQATIDAVQAAKA-QGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYA 68 (279)
T ss_dssp -CCEEEECC-------------------------CHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCCSSSCEE
T ss_pred ceEEEEEcCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEE
Confidence 4689999999999986 34689999999999987 5999999999999999999888753 69
Q ss_pred EeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceE--------------------------
Q 002314 665 AAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL-------------------------- 718 (937)
Q Consensus 665 iaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl-------------------------- 718 (937)
|++||+.+....+.+... ...+. +.+.++++.+.+..-...+.......
T Consensus 69 i~~nGai~~~~~~~~~~~--~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T 3mpo_A 69 ITFNGSVAQTISGKVLTN--HSLTY---EDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREV 143 (279)
T ss_dssp EEGGGTEEEETTSCEEEE--CCCCH---HHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCG
T ss_pred EEcCcEEEECCCCCEEEe--cCCCH---HHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCH
Confidence 999999443333332211 12232 23444444443321111111100000
Q ss_pred ----------EEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCC
Q 002314 719 ----------VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMK 787 (937)
Q Consensus 719 ----------~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~ 787 (937)
.+-+. .+++ ...++.+.+ ...+. ..+.++ .+..++||.|+++|||.|+++++++++
T Consensus 144 ~~~~~~~~~~ki~~~-~~~~----~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------ 210 (279)
T 3mpo_A 144 SETPRDLTISKAMFV-DYPQ----VIEQVKANM-PQDFK-DRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLG------ 210 (279)
T ss_dssp GGSCTTCCCCEEEEE-CCHH----HHHHHHHHC-CHHHH-HHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTT------
T ss_pred HHhhccCCcEEEEEc-CCHH----HHHHHHHHH-HHHhC-CCEEEEEecCceEEEecCCCChHHHHHHHHHHcC------
Confidence 00000 0111 122333333 11011 124544 468899999999999999999999998
Q ss_pred CCCceEEEEecCCCCcHHHHHhcCc
Q 002314 788 TAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 788 ~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
++++++++||| +.||++||+.++.
T Consensus 211 i~~~~~i~~GD-~~NDi~m~~~ag~ 234 (279)
T 3mpo_A 211 LTADDVMTLGD-QGNDLTMIKYAGL 234 (279)
T ss_dssp CCGGGEEEC---CCTTHHHHHHSTE
T ss_pred CCHHHEEEECC-chhhHHHHHhcCc
Confidence 67899999999 9999999999864
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.8e-19 Score=187.25 Aligned_cols=181 Identities=15% Similarity=0.182 Sum_probs=121.6
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC----ceEEee
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAAE 667 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l~liae 667 (937)
+|||+|+||||++.. ..+ +.++++|+++.+ |+.|+|+|||++..+..++..++ .++|++
T Consensus 4 ~li~~DlDGTLl~~~--------------~~~-~~~~~~l~~~~~--gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~ 66 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ--------------QAL-EHLQEYLGDRRG--NFYLAYATGRSYHSARELQKQVGLMEPDYWLTA 66 (244)
T ss_dssp EEEEECTBTTTBSCH--------------HHH-HHHHHHHHTTGG--GEEEEEECSSCHHHHHHHHHHHTCCCCSEEEET
T ss_pred eEEEEeCCCCCcCCH--------------HHH-HHHHHHHHHhcC--CCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEEC
Confidence 599999999999852 223 678899988653 79999999999999999888753 479999
Q ss_pred CceEEEecC---CeeeeccccccChhH-HHHHHHHHHHHHhcCCCcee----eeecceEEEEeeccChhhhHHHHHHHHH
Q 002314 668 NGMFLRCTT---GKWMTTMPEHLNMEW-VDSLKHVFEYFTERTPRSHF----EQRETSLVWNYKYADVEFGRIQARDMLQ 739 (937)
Q Consensus 668 nG~~ir~~~---~~w~~~~~~~~~~~w-~~~v~~il~~~~~~~~Gs~i----E~K~~sl~~hyr~ad~e~~~~~a~el~~ 739 (937)
||+.+.... ..|...+ ...| ...+...+ ...++... +.+...+.+++..... .....++.+
T Consensus 67 NGa~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ki~~~~~~~~~---~~~~~~l~~ 135 (244)
T 1s2o_A 67 VGSEIYHPEGLDQHWADYL----SEHWQRDILQAIA----DGFEALKPQSPLEQNPWKISYHLDPQAC---PTVIDQLTE 135 (244)
T ss_dssp TTTEEEETTEECHHHHHHH----HTTCCHHHHHHHH----HTCTTEEECCGGGCBTTBEEEEECTTSC---THHHHHHHH
T ss_pred CCcEEEeCCCcChHHHHHH----hccccHHHHHHHH----HhccCccccCcccCCCeEEEEEeChhhH---HHHHHHHHH
Confidence 999998531 1121111 1112 12222222 22233221 2344566666543211 112234444
Q ss_pred HHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 740 HLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 740 ~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
.+ ... ...+.++ ++..++||.|++++||.|+++++++++ ++++++++||| +.||++||+.+
T Consensus 136 ~~-~~~--~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~~~~GD-~~nD~~m~~~~ 197 (244)
T 1s2o_A 136 ML-KET--GIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGLFETS 197 (244)
T ss_dssp HH-HTS--SCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHTSS
T ss_pred HH-Hhc--CCCeEEEEecCceEEeccCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHhcc
Confidence 44 332 1246664 568899999999999999999999998 56899999999 99999999854
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=185.74 Aligned_cols=198 Identities=17% Similarity=0.213 Sum_probs=123.3
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc-c---Cce
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE-Y---NLW 663 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~-~---~l~ 663 (937)
.++.||||+|+||||++. +..++++++++|++|.+ . +.|+|+|||+...+.+.++. + ..+
T Consensus 3 ~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~ 66 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDY 66 (246)
T ss_dssp -CCSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSE
T ss_pred CCCceEEEEECCCCcCCC--------------CcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCE
Confidence 356799999999999986 34689999999999986 5 99999999999888887763 2 247
Q ss_pred EEeeCceEEEecCCe-eeeccccccChhHHHHHHHHHHHH-----HhcCCCceeeeecceEEEE-e-eccCh----hhhH
Q 002314 664 LAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYF-----TERTPRSHFEQRETSLVWN-Y-KYADV----EFGR 731 (937)
Q Consensus 664 liaenG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~-----~~~~~Gs~iE~K~~sl~~h-y-r~ad~----e~~~ 731 (937)
+|++||+.+...++. |...++...+.+....+.+.++.+ .....+.+++.+...+.++ + +.... .+..
T Consensus 67 ~I~~NGa~i~~~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (246)
T 2amy_A 67 VFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYE 146 (246)
T ss_dssp EESGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHH
T ss_pred EEECCCcEEEeCCcEEEeeecccccCHHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhhee
Confidence 899999999864332 222110001333333333333322 1112345554433222221 1 11110 1100
Q ss_pred -----HHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecC---CCC
Q 002314 732 -----IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGK 802 (937)
Q Consensus 732 -----~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d~n 802 (937)
....++.+.+ ...+....+.+.. +..++||.|+++|||.||++| ++ ++.++++||||. +.|
T Consensus 147 ~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~~------i~~~~viafGD~~~~~~N 216 (246)
T 2amy_A 147 LDKKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---EN------DGYKTIYFFGDKTMPGGN 216 (246)
T ss_dssp HHHHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---TT------SCCSEEEEEECSCC---C
T ss_pred ecCCHHHHHHHHHHH-HHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---hC------CCHHHEEEECCCCCCCCC
Confidence 0012233333 2222222466654 778999999999999999999 66 578999999995 689
Q ss_pred cHHHHHhcC
Q 002314 803 DEDVYAFFE 811 (937)
Q Consensus 803 DEdMf~~~~ 811 (937)
|++||+.++
T Consensus 217 D~~Ml~~a~ 225 (246)
T 2amy_A 217 DHEIFTDPR 225 (246)
T ss_dssp CCHHHHCTT
T ss_pred cHHHHHhCC
Confidence 999999764
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-18 Score=170.95 Aligned_cols=162 Identities=14% Similarity=0.057 Sum_probs=122.2
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 002314 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (937)
Q Consensus 363 ~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (937)
+.+|+++||+.+.||+..+++|+..+ +++|+ +.|+++|. ++.. +++++++.+.+. .|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~----~~~~~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDE----KKIKLLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTH----HHHHHHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccH----HHHHHHHHHcCC--------eEE
Confidence 46799999999999999999999987 44454 55777753 3332 344445544331 244
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCc-eEEEeCCC-CcccccCCceEEECCCCHHHHHHH
Q 002314 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG-VLILSEFA-GAAQSLGAGAILVNPWNITEVANA 520 (937)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g-~lVlSe~a-G~~~~lg~~gllVnP~D~~~lA~a 520 (937)
+ +.++.+++..+|+.||++|+||..||||++++|||||+ . |+|++... |..+.+..++.+++|.|+++++++
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G----~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVG----IVPVIANSPLSATRQFALDERSLFEPNNAKDLSAK 133 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT----CCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHH
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC----CCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHH
Confidence 5 99999999999999999999999999999999999993 5 66664544 444555556679999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHH
Q 002314 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (937)
Q Consensus 521 I~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~ 553 (937)
|.++++. ++.+.++.++++++++.|+|..+++
T Consensus 134 i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 134 IDWWLEN-KLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHHC-HHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHCChhhhhc
Confidence 9999995 4677777788888888888887765
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-18 Score=182.83 Aligned_cols=186 Identities=16% Similarity=0.211 Sum_probs=124.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhH-HHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEe
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDL-KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~-~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~lia 666 (937)
+.|+|++|+||||++. ...+++++ +++|++|.+ .|+.|+|+|||+...+..++..++ .++|+
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~ 66 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLND--------------AKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVA 66 (271)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEE
T ss_pred CccEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEE
Confidence 3689999999999986 24578885 999999987 699999999999999998887763 58999
Q ss_pred eCceEEEecCCe-eeeccccccChhHHHHHHHHHHHHHhcC---------CCceeeeec---------------------
Q 002314 667 ENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT---------PRSHFEQRE--------------------- 715 (937)
Q Consensus 667 enG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~~---------~Gs~iE~K~--------------------- 715 (937)
+||+.+...++. +.. ..+. +.+.++++.+.+.. .+.++....
T Consensus 67 ~NGa~i~~~~~~i~~~----~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (271)
T 1rlm_A 67 ENGALVYEHGKQLFHG----ELTR---HESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDY 139 (271)
T ss_dssp GGGTEEEETTEEEEEC----CCCH---HHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCG
T ss_pred CCccEEEECCeEEEEe----cCCH---HHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCch
Confidence 999999864332 221 1232 34445554443321 112221100
Q ss_pred -----ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCC
Q 002314 716 -----TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (937)
Q Consensus 716 -----~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~ 789 (937)
..+.+.+. .+++ ...++.+.+ ...+.. .+.++ .+..++||.|.+++||.++++++++++ ++
T Consensus 140 ~~~~~~~~ki~i~-~~~~----~~~~~~~~l-~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~------i~ 206 (271)
T 1rlm_A 140 QEIDDVLFKFSLN-LPDE----QIPLVIDKL-HVALDG-IMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LS 206 (271)
T ss_dssp GGCCSCEEEEEEE-CCGG----GHHHHHHHH-HHHTTT-SSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CC
T ss_pred hhCCCceEEEEEE-cCHH----HHHHHHHHH-HHHcCC-cEEEEeccCCeEEEEcCCCChHHHHHHHHHHhC------CC
Confidence 00000000 0111 123344444 211221 35554 467899999999999999999999998 57
Q ss_pred CceEEEEecCCCCcHHHHHhcC
Q 002314 790 IDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 790 ~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
++++++||| +.||.+||+.++
T Consensus 207 ~~~~~~~GD-~~nD~~m~~~ag 227 (271)
T 1rlm_A 207 PQNVVAIGD-SGNDAEMLKMAR 227 (271)
T ss_dssp GGGEEEEEC-SGGGHHHHHHCS
T ss_pred HHHEEEECC-cHHHHHHHHHcC
Confidence 899999999 999999999874
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.77 E-value=7.8e-18 Score=181.76 Aligned_cols=193 Identities=13% Similarity=0.104 Sum_probs=123.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc---eEEee
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAAE 667 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l---~liae 667 (937)
.|+|++|+||||++. ...++++++++|++ .+ .|+.|+|+|||+...+..++..+++ ++|++
T Consensus 2 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~-~~-~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~ 65 (268)
T 1nf2_A 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEK-LS-RKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (268)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHH-HT-TTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred ccEEEEeCCCcCCCC--------------CCccCHHHHHHHHH-Hh-CCCEEEEECCCChHHHHHHHHHhCCCCCeEEEe
Confidence 479999999999986 34588999999999 64 6999999999999999998887754 79999
Q ss_pred CceEEEecCCeeeeccccccChhHHHHHHHHHHHHH-----hcCCCceeeeec---------ceEEEE-eeccChhhh--
Q 002314 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRE---------TSLVWN-YKYADVEFG-- 730 (937)
Q Consensus 668 nG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~-----~~~~Gs~iE~K~---------~sl~~h-yr~ad~e~~-- 730 (937)
||+.+...++..... ...+.++...+.+.++.+. ....+.+++.+. ..+... +...+ ++.
T Consensus 66 NGa~i~~~~~~~i~~--~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 142 (268)
T 1nf2_A 66 NGAIVYLPEEGVILN--EKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLS-ELVSK 142 (268)
T ss_dssp GGTEEEETTTEEEEE--CCBCHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHH-HHHHH
T ss_pred CCeEEECCCCCEEEe--cCCCHHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHH-Hhccc
Confidence 999998633332111 1234333333333332210 001122222110 000000 00000 000
Q ss_pred -----------HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 731 -----------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 731 -----------~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
.....++.+.+ ...+. ..+.++ .+..++||.|++++||.+++.++++++ ++++++++|||
T Consensus 143 ~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~~GD 214 (268)
T 1nf2_A 143 MGTTKLLLIDTPERLDELKEIL-SERFK-DVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKEEIVVFGD 214 (268)
T ss_dssp HCBSEEEEECCHHHHHHHHHHH-HHHHT-TTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGGGEEEEEC
T ss_pred CCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEecCceEEEeCCCCChHHHHHHHHHHcC------CCHHHeEEEcC
Confidence 01122333333 11111 235554 567899999999999999999999998 56899999999
Q ss_pred CCCCcHHHHHhcC
Q 002314 799 FLGKDEDVYAFFE 811 (937)
Q Consensus 799 ~d~nDEdMf~~~~ 811 (937)
+.||.+|++.++
T Consensus 215 -~~nD~~~~~~ag 226 (268)
T 1nf2_A 215 -NENDLFMFEEAG 226 (268)
T ss_dssp -SHHHHHHHTTCS
T ss_pred -chhhHHHHHHcC
Confidence 999999998764
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=179.96 Aligned_cols=179 Identities=16% Similarity=0.245 Sum_probs=122.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC-ceEEeeCc
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-LWLAAENG 669 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-l~liaenG 669 (937)
.|+|+||+||||++.. ..+++.+.++|++|.+ .|+.|+++|||+...+..++..++ .++|+.||
T Consensus 5 ~kli~fDlDGTLl~~~--------------~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nG 69 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEV--------------YGIPESAKHAIRLCQK-NHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGG 69 (274)
T ss_dssp CCEEEECSBTTTBBTT--------------TBCCHHHHHHHHHHHH-TTCEEEEECSSCTTTSCHHHHTTCCSEEEETTT
T ss_pred ceEEEEECCCCCCCCC--------------CcCCHHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEEEecCc
Confidence 5899999999999873 4589999999999987 599999999999999988888774 35899999
Q ss_pred eEEEecCCe-eeeccccccChhHHHHHHHHHHHHHhcCCCceeeeec---------------------------------
Q 002314 670 MFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRE--------------------------------- 715 (937)
Q Consensus 670 ~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~--------------------------------- 715 (937)
+.+...+.. +.. ..+.+ .+.++++.+.+..-...+....
T Consensus 70 a~i~~~~~~~~~~----~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (274)
T 3fzq_A 70 NYIQYHGELLYNQ----SFNQR---LIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEK 142 (274)
T ss_dssp TEEEETTEEEEEC----CCCHH---HHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSS
T ss_pred cEEEECCEEEEEc----CCCHH---HHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhh
Confidence 999854322 222 23333 3333343332211111111100
Q ss_pred ---------------ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEE-EEcC--eEEEEEECCCCHHHHHHHHH
Q 002314 716 ---------------TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGS--KSVEVRAVGVTKGAAIDRIL 777 (937)
Q Consensus 716 ---------------~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v-~~Gk--~~vEV~p~gvnKG~Av~~Ll 777 (937)
..+.+. .+++ ...++.+.+ .. .+.+ ..+. .++||.|.+++||.|+++++
T Consensus 143 ~~~~~~~~~~~~~~~~ki~~~---~~~~----~~~~~~~~l-~~-----~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 209 (274)
T 3fzq_A 143 ITYENNIEEYKSQDIHKICLW---SNEK----VFDEVKDIL-QD-----KMELAQRDISSQYYEIIQKDFHKGKAIKRLQ 209 (274)
T ss_dssp SCCCCCGGGCSSCCCCEEEEE---CCHH----HHHHHHHHH-GG-----GEEEEEEEGGGTEEEEEETTCSHHHHHHHHH
T ss_pred cccccchhhhcccCeEEEEEE---cCHH----HHHHHHHHh-hc-----ceEEEeccCCCceEEEeeCCCCHHHHHHHHH
Confidence 011111 1111 233445555 22 1343 3344 89999999999999999999
Q ss_pred HHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 778 AEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 778 ~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
++++ ++++++++||| +.||++||+.++
T Consensus 210 ~~lg------i~~~~~i~~GD-~~NDi~m~~~ag 236 (274)
T 3fzq_A 210 ERLG------VTQKETICFGD-GQNDIVMFQASD 236 (274)
T ss_dssp HHHT------CCSTTEEEECC-SGGGHHHHHTCS
T ss_pred HHcC------CCHHHEEEECC-ChhHHHHHHhcC
Confidence 9998 57899999999 999999999874
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-17 Score=177.12 Aligned_cols=188 Identities=13% Similarity=0.100 Sum_probs=120.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC-ceEEeeC
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-LWLAAEN 668 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-l~liaen 668 (937)
..|+|+||+||||++.. ...+++.++++|++|.+ .|+.|+++|||+...+ +.+..++ .++|++|
T Consensus 11 miKli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~n 75 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSFE-------------THKVSQSSIDALKKVHD-SGIKIVIATGRAASDL-HEIDAVPYDGVIALN 75 (268)
T ss_dssp CCCEEEECSBTTTBCTT-------------TCSCCHHHHHHHHHHHH-TTCEEEEECSSCTTCC-GGGTTSCCCEEEEGG
T ss_pred ceEEEEEeCCCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHh-HHHHhcCCCcEEEeC
Confidence 46999999999999842 35689999999999987 5999999999999887 4555553 4789999
Q ss_pred ceEE-EecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHH---------------
Q 002314 669 GMFL-RCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRI--------------- 732 (937)
Q Consensus 669 G~~i-r~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~--------------- 732 (937)
|+.+ ...++.... ...+.+ .+.++++.+.+..-...+....... +....+.....
T Consensus 76 Ga~i~~~~~~~~~~---~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (268)
T 3r4c_A 76 GAECVLRDGSVIRK---VAIPAQ---DFRKSMELAREFDFAVALELNEGVF---VNRLTPTVEQIAGIVEHPVPPVVDIE 146 (268)
T ss_dssp GTEEEETTSCEEEE---CCCCHH---HHHHHHHHHHHTTCEEEEEETTEEE---ESCCCHHHHHHHHHHTCCCCCBCCHH
T ss_pred CcEEEEcCCeEEEE---ecCCHH---HHHHHHHHHHHcCcEEEEEECCEEE---EeCCcHHHHHHHHHcCCCCCcccchH
Confidence 9999 754322111 123333 3444444433221111111111100 00000000000
Q ss_pred -H-------------HHHHHHHHhcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEe
Q 002314 733 -Q-------------ARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (937)
Q Consensus 733 -~-------------a~el~~~L~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iG 797 (937)
. ..+....+ ...+ ..+.+ ..+..++||.|+++|||.||++++++++ ++++++++||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~G 217 (268)
T 3r4c_A 147 EMFERKECCQLCFYFDEEAEQKV-MPLL--SGLSATRWHPLFADVNVAGTSKATGLSLFADYYR------VKVSEIMACG 217 (268)
T ss_dssp HHHHHSCCCCEEEECCHHHHHHH-GGGC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT------CCGGGEEEEE
T ss_pred HHhccCceEEEEEecChHHHHHH-HHhC--CCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcC------CCHHHEEEEC
Confidence 0 00111122 1111 13443 4568899999999999999999999998 6789999999
Q ss_pred cCCCCcHHHHHhcC
Q 002314 798 HFLGKDEDVYAFFE 811 (937)
Q Consensus 798 D~d~nDEdMf~~~~ 811 (937)
| +.||++||+.++
T Consensus 218 D-~~NDi~m~~~ag 230 (268)
T 3r4c_A 218 D-GGNDIPMLKAAG 230 (268)
T ss_dssp C-SGGGHHHHHHSS
T ss_pred C-cHHhHHHHHhCC
Confidence 9 999999999985
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=185.73 Aligned_cols=270 Identities=14% Similarity=0.102 Sum_probs=178.7
Q ss_pred CCCEEEEeCcccchHH-HHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhh--cCCEEEEeCHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLP-KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp-~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll--~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
.+|+|++|......++ .++.+ ..++|+.++.|.. .+...+. ++...+.+.++ .+|.|...+....+.+..
T Consensus 95 ~pDvv~~~~~~~~~~~~~~~~~-~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--- 167 (375)
T 3beo_A 95 KPDIVLVHGDTTTTFIASLAAF-YNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATNLQK--- 167 (375)
T ss_dssp CCSEEEEETTSHHHHHHHHHHH-HTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH---
T ss_pred CCCEEEEeCCchHHHHHHHHHH-HHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHHHHH---
Confidence 3599999875333333 33333 3478888766643 2212121 22334444433 389998888766665543
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecc-cChhhhhhhhcCCchHHHHHHHHHHhcCC-cEEEEEeccccc-CCHHHHHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIG-IDSERFIRALEINPVQVHIKELQETFAGR-KVMLGVDRLDMI-KGIPQKLLA 384 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~~~-~iIL~VdRld~~-KGi~~~l~A 384 (937)
.|. ...++.++|+| +|...|.+..... ..+++++.++ .+++++||+.+. ||+..+++|
T Consensus 168 --~g~-----------~~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~a 228 (375)
T 3beo_A 168 --ENK-----------DESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRA 228 (375)
T ss_dssp --TTC-----------CGGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGTTHHHHHHHHH
T ss_pred --cCC-----------CcccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccchhHHHHHHHH
Confidence 122 12467899999 8987765421111 1234444434 466789999886 999999999
Q ss_pred HHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
+.++.+++|+++ |+ ++.. ++ ..++++++++++. . ..|++ .+.++..++..+|+.||++|
T Consensus 229 ~~~l~~~~~~~~----~i-~~~g-----~~-~~~~~~~~~~~~~-------~--~~v~~-~g~~~~~~~~~~~~~ad~~v 287 (375)
T 3beo_A 229 IKRLVDKHEDVQ----VV-YPVH-----MN-PVVRETANDILGD-------Y--GRIHL-IEPLDVIDFHNVAARSYLML 287 (375)
T ss_dssp HHHHHHHCTTEE----EE-EECC-----SC-HHHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHTCSEEE
T ss_pred HHHHHhhCCCeE----EE-EeCC-----CC-HHHHHHHHHHhhc-------c--CCEEE-eCCCCHHHHHHHHHhCcEEE
Confidence 999988888753 43 3311 11 1344555555321 0 14664 67889999999999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCC-CCccccc-CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~-aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (937)
+|| |.+++|||||+ .|+|+|.. +|..+.+ ..+|++|++ |++++|++|.++++++ +.++++.++++++
T Consensus 288 ~~s-----g~~~lEA~a~G----~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~~-~~~~~~~~~~~~~ 356 (375)
T 3beo_A 288 TDS-----GGVQEEAPSLG----VPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSDK-EAHDKMSKASNPY 356 (375)
T ss_dssp ECC-----HHHHHHHHHHT----CCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHCCCCCTT
T ss_pred ECC-----CChHHHHHhcC----CCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhCh-HhHhhhhhcCCCC
Confidence 999 67799999994 78888854 6665555 228999987 9999999999999854 5666666777777
Q ss_pred hhcCCHHHHHHHHHHH
Q 002314 543 VTTHTAQEWAETFVSE 558 (937)
Q Consensus 543 V~~~~~~~W~~~fl~~ 558 (937)
...+++.+.++.+.+.
T Consensus 357 ~~~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 357 GDGRASERIVEAILKH 372 (375)
T ss_dssp CCSCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHH
Confidence 7778887777766543
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-17 Score=174.04 Aligned_cols=182 Identities=15% Similarity=0.189 Sum_probs=126.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|+|+||+||||++. ...+++.+.++|++|.+ .|+.|+++|||+...+..++..++ ..+|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (231)
T 1wr8_A 3 IKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAED 67 (231)
T ss_dssp CCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eeEEEEECCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeC
Confidence 589999999999986 24588999999999987 599999999999999988887764 4689999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeee-ecc---eEEEEeeccChhhhHHHHHHHHHHHhcC
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ-RET---SLVWNYKYADVEFGRIQARDMLQHLWTG 744 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~-K~~---sl~~hyr~ad~e~~~~~a~el~~~L~~~ 744 (937)
|+.+... +..... ... +.+.++++.+.+..||..++. +.. .+.+.....+++ .+.++.+.+
T Consensus 68 Ga~i~~~-~~~~~~--~~l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--- 132 (231)
T 1wr8_A 68 GGAISYK-KKRIFL--ASM-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVE----TVREIINEL--- 132 (231)
T ss_dssp GTEEEET-TEEEES--CCC-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHH----HHHHHHHHT---
T ss_pred CcEEEeC-CEEEEe--ccH-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHH----HHHHHHHhc---
Confidence 9998763 332111 112 334455554443445544311 000 122211011222 223344333
Q ss_pred CCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 745 PISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 745 ~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
. ..+.++.+..++|+.|.+.+|+.+++.++++++ ++++++++||| +.||.+|++.++.
T Consensus 133 --~-~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iGD-~~nD~~~~~~ag~ 190 (231)
T 1wr8_A 133 --N-LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDAFKVVGY 190 (231)
T ss_dssp --T-CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred --C-CcEEEEecCcEEEEecCCCChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHcCC
Confidence 1 245666788899999999999999999999998 56789999999 9999999998753
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.7e-18 Score=177.40 Aligned_cols=175 Identities=17% Similarity=0.152 Sum_probs=120.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc--eEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaen 668 (937)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++ ++|++|
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~N 69 (227)
T 1l6r_A 5 IRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGEN 69 (227)
T ss_dssp CCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eEEEEEECCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeC
Confidence 589999999999986 24589999999999986 5999999999999999998887743 699999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecc--------eEEEEeeccChhhhHHHHHHHHHH
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET--------SLVWNYKYADVEFGRIQARDMLQH 740 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~--------sl~~hyr~ad~e~~~~~a~el~~~ 740 (937)
|+.+...++.... ..... +.+.++ +.+.+ .+ ..+.. .+.......++ +....
T Consensus 70 Ga~i~~~~~~~i~-~~~~l-----~~~~~i-~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 129 (227)
T 1l6r_A 70 GGIMFDNDGSIKK-FFSNE-----GTNKFL-EEMSK----RT-SMRSILTNRWREASTGFDIDPEDV--------DYVRK 129 (227)
T ss_dssp GTEEECTTSCEEE-SSCSH-----HHHHHH-HHHTT----TS-SCBCCGGGGGCSSSEEEBCCGGGH--------HHHHH
T ss_pred CcEEEeCCCCEEE-EeccH-----HHHHHH-HHHHH----Hh-cCCccccccceecccceEEecCCH--------HHHHH
Confidence 9999853333210 11112 334444 33222 11 11000 00000000111 11222
Q ss_pred HhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 741 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 741 L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+.+. + .+.++.+..++||.|++++||.++++++++++ ++++.+++||| +.||.+||+.++
T Consensus 130 ~~~~-~---~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~------~~~~~~~~iGD-~~nD~~m~~~ag 189 (227)
T 1l6r_A 130 EAES-R---GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPMFQLPV 189 (227)
T ss_dssp HHHT-T---TEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHTSSS
T ss_pred HHHh-c---CEEEEecCcEEEEecCCCCHHHHHHHHHHHhC------cCHHHEEEECC-cHHhHHHHHHcC
Confidence 2133 2 46666888999999999999999999999988 56789999999 999999998764
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.3e-17 Score=182.63 Aligned_cols=276 Identities=13% Similarity=0.110 Sum_probs=178.2
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhh-h-cCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV-L-AADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~l-l-~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
.+|+|++|+.....++..+..+..++|+.++.|... +...+.. +...+.+.+ . .+|.|...+....+.|..
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~---- 158 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYSP--WPEEANRTLTGHLAMYHFSPTETSRQNLLR---- 158 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTSS--TTHHHHHHHHHTTCSEEEESSHHHHHHHHH----
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccCC--CchHhhHHHHHhhccEEEcCcHHHHHHHHH----
Confidence 359999997533333433333445788888777532 1121111 122233332 2 389998888776665542
Q ss_pred HhCcccCCCceeeCCeeeEEEEEeccc-ChhhhhhhhcCCchHHHHHHHHHHhc----CC-cEEEEEeccccc-CCHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA----GR-KVMLGVDRLDMI-KGIPQK 381 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~----~~-~iIL~VdRld~~-KGi~~~ 381 (937)
.|.. ..++.++|+|+ |...+.+... +........++++++ ++ .+++++||+.+. ||+..+
T Consensus 159 -~g~~-----------~~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~l 225 (384)
T 1vgv_A 159 -ENVA-----------DSRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEI 225 (384)
T ss_dssp -TTCC-----------GGGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHH
T ss_pred -cCCC-----------hhhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHH
Confidence 2321 24577899995 5433322100 000011234555532 34 467899999986 999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|+..+.+++|+++ |++++++ ++ .++++++++++. . ..|++ .+.++.+++..+|+.||
T Consensus 226 i~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~~-------~--~~v~~-~g~~~~~~~~~~~~~ad 284 (384)
T 1vgv_A 226 CHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILGH-------V--KNVIL-IDPQEYLPFVWLMNHAW 284 (384)
T ss_dssp HHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhhc-------C--CCEEE-eCCCCHHHHHHHHHhCc
Confidence 999999998888753 5544322 22 234455555421 1 24665 57788899999999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC-CCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHh
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~-aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 538 (937)
+||.|| |.+++|||||+ .|+|+|.. +|..+.+ | +|++|+| |++++|++|.++|+++ +.++++.++
T Consensus 285 ~~v~~S-----g~~~lEA~a~G----~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~-~~~~~~~~~ 352 (384)
T 1vgv_A 285 LILTDS-----GGIQEEAPSLG----KPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDE-NEYQAMSRA 352 (384)
T ss_dssp EEEESS-----STGGGTGGGGT----CCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCH-HHHHHHHSS
T ss_pred EEEECC-----cchHHHHHHcC----CCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhCh-HHHhhhhhc
Confidence 999999 34479999994 78999987 5655555 5 8999988 9999999999999854 566666677
Q ss_pred hhhhhhcCCHHHHHHHHHHHH
Q 002314 539 NFTHVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 539 ~~~~V~~~~~~~W~~~fl~~l 559 (937)
.+++...+++.+.++.+++.+
T Consensus 353 ~~~~~~~~~~~~i~~~~~~~~ 373 (384)
T 1vgv_A 353 HNPYGDGQACSRILEALKNNR 373 (384)
T ss_dssp CCTTCCSCHHHHHHHHHHHTC
T ss_pred cCCCcCCCHHHHHHHHHHHHH
Confidence 777777777777777665443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-16 Score=173.60 Aligned_cols=188 Identities=12% Similarity=0.186 Sum_probs=125.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++|
T Consensus 4 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 68 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 68 (288)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred eEEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcC
Confidence 589999999999986 34588999999999987 599999999999999999988774 4699999
Q ss_pred ceEEEec-CCe-eeeccccccChhHHHHHHHHHHHHHhcC--------CCceeeeec------c---e------------
Q 002314 669 GMFLRCT-TGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRE------T---S------------ 717 (937)
Q Consensus 669 G~~ir~~-~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~~--------~Gs~iE~K~------~---s------------ 717 (937)
|+.+... +.. +... ... +.+.++++.+.+.. .+.+.+... . .
T Consensus 69 Ga~i~~~~~~~~~~~~----~~~---~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (288)
T 1nrw_A 69 GAVIHDPEGRLYHHET----IDK---KRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVL 141 (288)
T ss_dssp GTEEECTTCCEEEECC----CCH---HHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred CeEEEcCCCcEEEEee----CCH---HHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHH
Confidence 9999852 222 2211 222 33444444332210 111111000 0 0
Q ss_pred ----------EEEEeeccChhh-----------------hHHHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCH
Q 002314 718 ----------LVWNYKYADVEF-----------------GRIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTK 769 (937)
Q Consensus 718 ----------l~~hyr~ad~e~-----------------~~~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnK 769 (937)
..+++...-.++ ......++.+.+ .. . ..+.++. +..++||.|++++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l-~~-~--~~~~~~~s~~~~lei~~~~~~K 217 (288)
T 1nrw_A 142 KQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRY-EH-A--EDLTLVSSAEHNFELSSRKASK 217 (288)
T ss_dssp HHHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHH-TT-C--TTEEEECSSTTEEEEEETTCSH
T ss_pred HhhhhhhhhcCCceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHH-hh-C--CCEEEEeeCCCcEEEecCCCCh
Confidence 001110000000 001233445555 33 2 2466654 67899999999999
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
|.|++.++++++ ++++.+++||| +.||.+|++.++
T Consensus 218 ~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~m~~~ag 252 (288)
T 1nrw_A 218 GQALKRLAKQLN------IPLEETAAVGD-SLNDKSMLEAAG 252 (288)
T ss_dssp HHHHHHHHHHTT------CCGGGEEEEES-SGGGHHHHHHSS
T ss_pred HHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcC
Confidence 999999999998 57899999999 999999999875
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.3e-18 Score=195.04 Aligned_cols=240 Identities=9% Similarity=-0.028 Sum_probs=160.5
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccch-HHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS-DLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~-eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
..|+||.++.....+..+.+.. +.|+.+++|....- ..+...+... .....+-.+|.|...+....+
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~--------- 191 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRV--NPAAKLVYRASDGL-STINVASYIEREFDRVAPTLDVIALVSPAMAA--------- 191 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHH--CTTSEEEEEESSCH-HHHTCCHHHHHHHHHHGGGCSEEEESCGGGGG---------
T ss_pred CCCEEEECCchHHHHHHHHHHh--CCCEEEEEeccchh-hcccccHHHHHHHHHHHHhCCEEEEcCHHHHH---------
Confidence 4588885443222222344433 56777778864320 1111111112 222334456777655542111
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll 389 (937)
.+.-.+ ++.++|+|||.+.|.+.... ...++++|++|||+.+.||+ ++.+.
T Consensus 192 --------~~~~~~---~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~ 242 (406)
T 2hy7_A 192 --------EVVSRD---NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVAS 242 (406)
T ss_dssp --------GCSCST---TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHH
T ss_pred --------HHHhcC---CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHH
Confidence 111122 78999999999988754211 11244789999999999999 45555
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (937)
+..|++ .|+++|. ++ +.+ .|.. ..|+| .|.++.+++..+|+.||+||+||..
T Consensus 243 ~~~~~~----~l~ivG~-----g~------------~~~----~~l~--~~V~f-~G~~~~~~l~~~~~~adv~v~ps~~ 294 (406)
T 2hy7_A 243 KAFPQV----TFHVIGS-----GM------------GRH----PGYG--DNVIV-YGEMKHAQTIGYIKHARFGIAPYAS 294 (406)
T ss_dssp HHCTTE----EEEEESC-----SS------------CCC----TTCC--TTEEE-ECCCCHHHHHHHHHTCSEEECCBSC
T ss_pred HhCCCe----EEEEEeC-----ch------------HHh----cCCC--CCEEE-cCCCCHHHHHHHHHhcCEEEECCCc
Confidence 667765 4777753 22 111 1211 24665 7999999999999999999999999
Q ss_pred cCCChhHHHHH-------HhcCCCCceEEEeCCCCccccc-CCceEE-ECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 470 DGMNLVSYEFV-------ACQDLKKGVLILSEFAGAAQSL-GAGAIL-VNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 470 EG~nLv~~Eam-------Ac~~~~~g~lVlSe~aG~~~~l-g~~gll-VnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
||||++++||| ||+ .|+|+|+. .. +.+|++ |+|.|++++|++|.++|+++. +
T Consensus 295 E~~~~~~lEAm~Kl~eYla~G----~PVIas~~-----v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~ 355 (406)
T 2hy7_A 295 EQVPVYLADSSMKLLQYDFFG----LPAVCPNA-----VVGPYKSRFGYTPGNADSVIAAITQALEAPR----------V 355 (406)
T ss_dssp SCCCTTHHHHCHHHHHHHHHT----CCEEEEGG-----GTCSCSSEEEECTTCHHHHHHHHHHHHHCCC----------C
T ss_pred ccCchHHHHHHHHHHHHhhCC----CcEEEehh-----cccCcceEEEeCCCCHHHHHHHHHHHHhCcc----------h
Confidence 99999999999 994 78888876 22 567999 999999999999999999874 1
Q ss_pred hhhhcCCHHHHHHHHHHH
Q 002314 541 THVTTHTAQEWAETFVSE 558 (937)
Q Consensus 541 ~~V~~~~~~~W~~~fl~~ 558 (937)
...+.++|...++++++.
T Consensus 356 ~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 356 RYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp CCSCCCBHHHHHHHHHCG
T ss_pred hhhhcCCHHHHHHHHHHh
Confidence 446789999998888654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.75 E-value=7.6e-17 Score=172.38 Aligned_cols=185 Identities=11% Similarity=0.164 Sum_probs=120.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc-eEEeeCc
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-WLAAENG 669 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-~liaenG 669 (937)
.|+|+||+||||++.. ..+++.++++|++|.+ .|+.|+++|||+...+..++..+++ .+|+.||
T Consensus 3 ~kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~-~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nG 67 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDEQ--------------KQLPLSTIEAVRRLKQ-SGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNG 67 (258)
T ss_dssp CCEEEECTBTTTBCTT--------------SCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGG
T ss_pred ceEEEEeCCCCCcCCC--------------CccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHhcCCCEEEECCC
Confidence 5899999999999862 4588999999999987 5999999999999998888777642 4789999
Q ss_pred eEEEecCCe-eeeccccccChhHHHHHHHHHHHHHhcCCCceee-eecceEE---------------EEeeccChhh---
Q 002314 670 MFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE-QRETSLV---------------WNYKYADVEF--- 729 (937)
Q Consensus 670 ~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE-~K~~sl~---------------~hyr~ad~e~--- 729 (937)
+++...+.. +... .+ .+.+.++++.+.+..-...+. .+..... ..+....+.+
T Consensus 68 a~i~~~~~~i~~~~----~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (258)
T 2pq0_A 68 QYVVFEGNVLYKQP----LR---REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYEN 140 (258)
T ss_dssp TEEEETTEEEEECC----CC---HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGG
T ss_pred CEEEECCEEEEEec----CC---HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhc
Confidence 999764322 1211 23 234455555443321111111 1000000 0000000000
Q ss_pred ---------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 730 ---------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 730 ---------~-~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
+ ......+.+.+ . .+.+. .+..++||.|+++|||.|+++++++++ ++++++++|||
T Consensus 141 ~~~~k~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~GD 207 (258)
T 2pq0_A 141 KDIYQALLFCRAEEEEPYVRNY-----P--EFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLG------IDKKDVYAFGD 207 (258)
T ss_dssp SCCCEEEECSCHHHHHHHHHHC-----T--TEEEEEEETTEEEEEESSCCHHHHHHHHHHHHT------CCGGGEEEECC
T ss_pred cCceEEEEECCHHHHHHHHHhC-----C--CeEEEEeCCceEEEEECCCChHHHHHHHHHHhC------CCHHHEEEECC
Confidence 0 00111111111 1 34443 467899999999999999999999998 57899999999
Q ss_pred CCCCcHHHHHhcC
Q 002314 799 FLGKDEDVYAFFE 811 (937)
Q Consensus 799 ~d~nDEdMf~~~~ 811 (937)
+.||.+||+.++
T Consensus 208 -s~NDi~ml~~ag 219 (258)
T 2pq0_A 208 -GLNDIEMLSFVG 219 (258)
T ss_dssp -SGGGHHHHHHSS
T ss_pred -cHHhHHHHHhCC
Confidence 999999999874
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=9.5e-17 Score=172.11 Aligned_cols=179 Identities=13% Similarity=0.131 Sum_probs=115.7
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCceEE
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~i 672 (937)
||+||+||||++. . .+++.+.++|++|.+ +|+.|+++|||+...+. .++ +..++|++||+.+
T Consensus 2 li~~DlDGTLl~~--------------~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~-~~~~~i~~nGa~i 63 (259)
T 3zx4_A 2 IVFTDLDGTLLDE--------------R-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALG-LEPPFIVENGGGL 63 (259)
T ss_dssp EEEECCCCCCSCS--------------S-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTT-CCSSEEEGGGTEE
T ss_pred EEEEeCCCCCcCC--------------C-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcC-CCCcEEEECCcEE
Confidence 7999999999986 3 578899999999987 69999999999999998 333 2457999999999
Q ss_pred EecCCe----e-----eeccccccChhHHHHHHHHHHHHHhc--CCCceeee----------------------ecceEE
Q 002314 673 RCTTGK----W-----MTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQ----------------------RETSLV 719 (937)
Q Consensus 673 r~~~~~----w-----~~~~~~~~~~~w~~~v~~il~~~~~~--~~Gs~iE~----------------------K~~sl~ 719 (937)
...... | ........+.+ .+.++++.+.+. ..-..... ......
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (259)
T 3zx4_A 64 YLPRDWPVRAGRPKGGYRVVSLAWPYR---KVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDET 140 (259)
T ss_dssp EEETTCSSCCSEEETTEEEEECSCCHH---HHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEE
T ss_pred EeCCCCcccccccCCceEEEEcCCCHH---HHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhcccccee
Confidence 864432 0 01111112222 233333322210 00000000 000000
Q ss_pred EEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCC--ceEEEEe
Q 002314 720 WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI--DYVLCIG 797 (937)
Q Consensus 720 ~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~--d~vl~iG 797 (937)
+.+ .++ . ...+.+.+ .. ..+.++.+..++|+.|. ++||.|+++++++++ +++ +++++||
T Consensus 141 ~~~--~~~--~---~~~~~~~l-~~----~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~------i~~~~~~~~~~G 201 (259)
T 3zx4_A 141 LVL--CPE--E---VEAVLEAL-EA----VGLEWTHGGRFYHAAKG-ADKGRAVARLRALWP------DPEEARFAVGLG 201 (259)
T ss_dssp BCC--CTT--T---HHHHHHHH-HH----TTCEEEECSSSEEEESS-CCHHHHHHHHHHTCS------SHHHHTSEEEEE
T ss_pred EEe--CcH--H---HHHHHHHH-HH----CCcEEEecCceEEEcCC-CCHHHHHHHHHHHhC------CCCCCceEEEEe
Confidence 001 111 1 22333444 21 14677777677899999 999999999999998 456 8999999
Q ss_pred cCCCCcHHHHHhcCc
Q 002314 798 HFLGKDEDVYAFFEP 812 (937)
Q Consensus 798 D~d~nDEdMf~~~~~ 812 (937)
| +.||++||+.++.
T Consensus 202 D-~~nD~~m~~~ag~ 215 (259)
T 3zx4_A 202 D-SLNDLPLFRAVDL 215 (259)
T ss_dssp S-SGGGHHHHHTSSE
T ss_pred C-CHHHHHHHHhCCC
Confidence 9 9999999998753
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3.3e-17 Score=175.04 Aligned_cols=178 Identities=17% Similarity=0.121 Sum_probs=116.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|+||+|+||||+ .. ..++ +++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++|
T Consensus 2 ikli~~DlDGTLl-~~--------------~~~~-~~~~~l~~l~~-~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~N 64 (249)
T 2zos_A 2 IRLIFLDIDKTLI-PG--------------YEPD-PAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (249)
T ss_dssp EEEEEECCSTTTC-TT--------------SCSG-GGHHHHHHHHH-TTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred ccEEEEeCCCCcc-CC--------------CCcH-HHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeC
Confidence 4899999999999 42 2243 49999999987 599999999999999999888774 4899999
Q ss_pred ceEEEecC-------------CeeeeccccccChhHHHHHHHHHHHHHhcCC----------------Cceee------e
Q 002314 669 GMFLRCTT-------------GKWMTTMPEHLNMEWVDSLKHVFEYFTERTP----------------RSHFE------Q 713 (937)
Q Consensus 669 G~~ir~~~-------------~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~----------------Gs~iE------~ 713 (937)
|+.+...+ +.+... ...+.+ .+.++++.+.+..+ +...+ .
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~i~~--~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (249)
T 2zos_A 65 GSAIFIPKGYFPFDVKGKEVGNYIVIE--LGIRVE---KIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAME 139 (249)
T ss_dssp TTEEECCTTCCC------CCCCCCEEE--CSCCHH---HHHHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHC
T ss_pred CeEEEccCCcccccccccccCceEEEe--cCCCHH---HHHHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhh
Confidence 99998542 222111 112322 23333332221100 00000 0
Q ss_pred ecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCC-CCce
Q 002314 714 RETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT-AIDY 792 (937)
Q Consensus 714 K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~-~~d~ 792 (937)
+.....+.+.. +++. .+.+ .. ..+.++.+..++||.| ++|||.||++|+++++ + ++++
T Consensus 140 ~~~~~~~~~~~-~~~~--------~~~l-~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~~------~~~~~~ 198 (249)
T 2zos_A 140 REYSETIFEWS-RDGW--------EEVL-VE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFYK------RLGQIE 198 (249)
T ss_dssp CSSCEEEEECS-SSCH--------HHHH-HH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHHH------TTSCEE
T ss_pred hhhcCceEecC-CHHH--------HHHH-Hh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHhc------cCCCce
Confidence 00000111111 1110 1222 11 1356666667899999 9999999999999987 4 5799
Q ss_pred EEEEecCCCCcHHHHHhcCc
Q 002314 793 VLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 793 vl~iGD~d~nDEdMf~~~~~ 812 (937)
+++||| +.||++||+.++.
T Consensus 199 viafGD-~~NDi~Ml~~ag~ 217 (249)
T 2zos_A 199 SYAVGD-SYNDFPMFEVVDK 217 (249)
T ss_dssp EEEEEC-SGGGHHHHTTSSE
T ss_pred EEEECC-CcccHHHHHhCCc
Confidence 999999 9999999999875
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-17 Score=177.38 Aligned_cols=191 Identities=16% Similarity=0.178 Sum_probs=118.0
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC----c-eEEe
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----L-WLAA 666 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l-~lia 666 (937)
|+|++|+||||++.. ...+++.++++|++|.+ .|+.|+++|||+ ..+..++..++ + ++|+
T Consensus 3 kli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~ 67 (261)
T 2rbk_A 3 KALFFDIDGTLVSFE-------------THRIPSSTIEALEAAHA-KGLKIFIATGRP-KAIINNLSELQDRNLIDGYIT 67 (261)
T ss_dssp CEEEECSBTTTBCTT-------------TSSCCHHHHHHHHHHHH-TTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEE
T ss_pred cEEEEeCCCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCh-HHHHHHHHHhCcccccCeEEE
Confidence 799999999999872 22388999999999987 599999999999 88876665543 3 6899
Q ss_pred eCceEEEecCCe-eeeccccccChhHHHHHHHHHHHHHh-----cCCCceeeeecceEE-EEeecc--------ChhhhH
Q 002314 667 ENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTE-----RTPRSHFEQRETSLV-WNYKYA--------DVEFGR 731 (937)
Q Consensus 667 enG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~-----~~~Gs~iE~K~~sl~-~hyr~a--------d~e~~~ 731 (937)
+||+.+...+.. +.. ..+.+....+.+.++...- ...+.+++.....+. .+++.. .+++..
T Consensus 68 ~nGa~i~~~~~~i~~~----~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (261)
T 2rbk_A 68 MNGAYCFVGEEVIYKS----AIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEAS 143 (261)
T ss_dssp GGGTEEEETTEEEEEC----CCCHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHH
T ss_pred eCCEEEEECCEEEEec----CCCHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhc
Confidence 999999763221 222 2333333333333332200 001112211000000 011000 000000
Q ss_pred ---------HHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC
Q 002314 732 ---------IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG 801 (937)
Q Consensus 732 ---------~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~ 801 (937)
....+....+ ...+. .+.++. +..++||.|.+++||.+++.++++++ ++++++++||| +.
T Consensus 144 ~~~~~k~~~~~~~~~~~~~-~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iGD-~~ 213 (261)
T 2rbk_A 144 NKEVIQMTPFITEEEEKEV-LPSIP--TCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFGD-GG 213 (261)
T ss_dssp TSCCSEEEECCCHHHHHHH-GGGST--TCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEEC-SG
T ss_pred cCceeEEEEEeCHHHHHHH-HHhcC--CeEEEEecCCeEEecCCCCChHHHHHHHHHHcC------CCHHHEEEECC-CH
Confidence 0000111123 22122 355554 57889999999999999999999998 57899999999 99
Q ss_pred CcHHHHHhcC
Q 002314 802 KDEDVYAFFE 811 (937)
Q Consensus 802 nDEdMf~~~~ 811 (937)
||.+|++.++
T Consensus 214 nD~~~~~~ag 223 (261)
T 2rbk_A 214 NDISMLRHAA 223 (261)
T ss_dssp GGHHHHHHSS
T ss_pred HHHHHHHHcC
Confidence 9999999874
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.67 E-value=3e-16 Score=158.44 Aligned_cols=142 Identities=18% Similarity=0.166 Sum_probs=112.4
Q ss_pred cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCccc
Q 002314 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (937)
Q Consensus 361 ~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~p 440 (937)
.++++|+++||+.+.||+..+++|+..+ |+++ |+++|... +...+ ++++.++.. +.. ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~~l----~~~~~~~~~--~l~--~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGDHA----ERYARKIMK--IAP--DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTSTH----HHHHHHHHH--HSC--TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHHHH----HHHHHhhhc--ccC--Cc
Confidence 3678999999999999999999999886 5554 77776432 11122 333331110 111 13
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA 518 (937)
|.+ .+.++.+++..+|+.||++|+||..||||++++|||||+ .|+|+|..+|..+.+ +.+|+++ +.|+++++
T Consensus 80 v~~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 80 VKF-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp EEE-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHH
T ss_pred EEE-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC----CcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHH
Confidence 664 689999999999999999999999999999999999994 799999988888877 5689999 99999999
Q ss_pred HHHHHHHcCCH
Q 002314 519 NAIARALNMSP 529 (937)
Q Consensus 519 ~aI~~aL~m~~ 529 (937)
++|.++++++.
T Consensus 154 ~~i~~l~~~~~ 164 (177)
T 2f9f_A 154 DAMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCHH
Confidence 99999998875
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-15 Score=164.14 Aligned_cols=193 Identities=13% Similarity=0.177 Sum_probs=126.1
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHH-------HhhcCCCCeEEEEcCCChhhHHHHhcccC-
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN-------ALCHDPKTTIVVLSGSDRNVLDKNFQEYN- 661 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~-------~L~~d~g~~V~IvSGR~~~~L~~~~~~~~- 661 (937)
..++|+||+||||++.. +++.+..+|. +++..++..++++|||+...+..++..++
T Consensus 21 ~~kliifDlDGTLlds~----------------i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~ 84 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT----------------IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKF 84 (289)
T ss_dssp CSEEEEEETBTTTBCSS----------------CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTC
T ss_pred CCeEEEEECCCCCcCCC----------------CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhcc
Confidence 47899999999999862 4455555555 45566799999999999999998887653
Q ss_pred ----ceEEeeCceEEEec--CCe------eeeccccccChhHHHHHHHHHHHHHhcC-----CCceeeeecceEEEEeec
Q 002314 662 ----LWLAAENGMFLRCT--TGK------WMTTMPEHLNMEWVDSLKHVFEYFTERT-----PRSHFEQRETSLVWNYKY 724 (937)
Q Consensus 662 ----l~liaenG~~ir~~--~~~------w~~~~~~~~~~~w~~~v~~il~~~~~~~-----~Gs~iE~K~~sl~~hyr~ 724 (937)
..+++.+|..+... ++. |...+... ...+.+.++++.+.++. ..+..+.+...+.+||+.
T Consensus 85 ~~~~~~~i~~~g~~i~~~~~ng~~~~~~~~~~~~~~~---~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~ 161 (289)
T 3gyg_A 85 RYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEG---FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQE 161 (289)
T ss_dssp CBCCSEEEETTTTEEEECCSSSTTEECHHHHHHHHTT---CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEEC
T ss_pred CCCCCeEeecCCceEEEEcCCCcEeecCchhhhhccc---CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEec
Confidence 34888888877641 111 22111111 12345667776665431 122234556677889987
Q ss_pred cChhhhHHHHHHHHHHHhcCCCCCCCeEEEEc---------CeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEE
Q 002314 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQG---------SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (937)
Q Consensus 725 ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~G---------k~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~ 795 (937)
.++.........+...+ ... .....+... ...+|+.|.+.+|+.++++++++++ ++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~l-~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~------~~~~~~~~ 232 (289)
T 3gyg_A 162 QDEINDKKNLLAIEKIC-EEY--GVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYN------LNTERAIA 232 (289)
T ss_dssp CCHHHHHHHHHHHHHHH-HHH--TEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccccchHHHHHHHHHH-HHc--CCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcC------CChhhEEE
Confidence 65432111112222222 110 112233332 2689999999999999999999998 57899999
Q ss_pred EecCCCCcHHHHHhcC
Q 002314 796 IGHFLGKDEDVYAFFE 811 (937)
Q Consensus 796 iGD~d~nDEdMf~~~~ 811 (937)
||| +.||++|++.++
T Consensus 233 ~GD-s~~D~~~~~~ag 247 (289)
T 3gyg_A 233 FGD-SGNDVRMLQTVG 247 (289)
T ss_dssp EEC-SGGGHHHHTTSS
T ss_pred EcC-CHHHHHHHHhCC
Confidence 999 999999998763
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.63 E-value=7.4e-15 Score=164.97 Aligned_cols=267 Identities=15% Similarity=0.079 Sum_probs=161.9
Q ss_pred HHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhh--cCCEEEEeCHHHHHHHH
Q 002314 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFV 303 (937)
Q Consensus 226 ~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll--~aDlIgF~t~~~~~~Fl 303 (937)
.+..+ +|+|++|++....++..+..+..++|+.+ .|..+.+...+. ++...+.+.++ .+|.+...+....+.|.
T Consensus 87 l~~~~-pDvv~~~~~~~~~~~~~~~a~~~~ip~v~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~ 162 (376)
T 1v4v_A 87 LKEMG-ADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKANLL 162 (376)
T ss_dssp HHHTT-CSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred HHHcC-CCEEEEeCChHHHHHHHHHHHHhCCCEEE-EeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHHHHH
Confidence 33444 59999998765545533333344788864 555443222211 12222333222 37888888776655544
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEeccc-ChhhhhhhhcCCchHHHHHHHHHHhcC-CcEEEEEecccccCCHHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIL~VdRld~~KGi~~~ 381 (937)
. .|. ...++.++|+++ |...+.... ..+++++++ +.+++++||+...||+..+
T Consensus 163 ~-----~g~-----------~~~ki~vi~n~~~d~~~~~~~~---------~~~~~~~~~~~~vl~~~gr~~~~k~~~~l 217 (376)
T 1v4v_A 163 K-----EGK-----------REEGILVTGQTGVDAVLLAAKL---------GRLPEGLPEGPYVTVTMHRRENWPLLSDL 217 (376)
T ss_dssp T-----TTC-----------CGGGEEECCCHHHHHHHHHHHH---------CCCCTTCCSSCEEEECCCCGGGGGGHHHH
T ss_pred H-----cCC-----------CcceEEEECCchHHHHhhhhhh---------hHHHHhcCCCCEEEEEeCcccchHHHHHH
Confidence 2 121 134677888864 543332110 012223333 4466789999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|++.+.+++|+++ |+++++ +++ .++++++++++. . ..|++ .+.++..++..+|+.||
T Consensus 218 l~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~~-------~--~~v~~-~g~~g~~~~~~~~~~ad 276 (376)
T 1v4v_A 218 AQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLKG-------V--RNFVL-LDPLEYGSMAALMRASL 276 (376)
T ss_dssp HHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHTEE
T ss_pred HHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhcc-------C--CCEEE-ECCCCHHHHHHHHHhCc
Confidence 999999988888764 544422 222 234455555421 1 24665 57788889999999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC-CCccccc-CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~-aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
+||.|| +|+ .+|||||+ .|+|++.. +|..+.+ +.+|++|+ .|++++|++|.++|+++ +.++++.+..
T Consensus 277 ~~v~~S--~g~---~lEA~a~G----~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d~-~~~~~~~~~~ 345 (376)
T 1v4v_A 277 LLVTDS--GGL---QEEGAALG----VPVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLENP-EELSRMRKAK 345 (376)
T ss_dssp EEEESC--HHH---HHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTCH-HHHHHHHHSC
T ss_pred EEEECC--cCH---HHHHHHcC----CCEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhCh-HhhhhhcccC
Confidence 999999 554 78999994 67887754 4544444 33688886 49999999999999854 4555555443
Q ss_pred hhhhhcCCHHHHHH
Q 002314 540 FTHVTTHTAQEWAE 553 (937)
Q Consensus 540 ~~~V~~~~~~~W~~ 553 (937)
..+-..+.+.+.++
T Consensus 346 ~~~~~~~~~~~i~~ 359 (376)
T 1v4v_A 346 NPYGDGKAGLMVAR 359 (376)
T ss_dssp CSSCCSCHHHHHHH
T ss_pred CCCCCChHHHHHHH
Confidence 33323333444333
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=172.48 Aligned_cols=199 Identities=13% Similarity=0.023 Sum_probs=147.7
Q ss_pred eEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEE
Q 002314 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (937)
Q Consensus 326 ~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvq 403 (937)
.++.++|+++++....+..... .+|+++ .+.++++++||+.+ ||++.+|+||.++++++|+++ |++
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~~-------~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i 411 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAEP-------PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWL 411 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCCC-------CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEE
T ss_pred ceeEcCCCcCCCCCCCCCCCCC-------CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEE
Confidence 5788999965543221110100 123344 34567889999999 999999999999999999865 777
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 404 i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
+|. +++. ++++++++.+.+. . ...|+| .|.++.+++..+|+.|||||+||.+ |||++++|||||+
T Consensus 412 ~G~----~g~~----~~~l~~~~~~~~l----~-~~~v~~-~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G 476 (568)
T 2vsy_A 412 LSG----PGEA----DARLRAFAHAQGV----D-AQRLVF-MPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG 476 (568)
T ss_dssp ECC----STTH----HHHHHHHHHHTTC----C-GGGEEE-ECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT
T ss_pred ecC----CHHH----HHHHHHHHHHcCC----C-hhHEEe-eCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC
Confidence 752 3333 3445555544331 1 014664 7899999999999999999999999 9999999999994
Q ss_pred CCCCceEEE-------eCCC-------CcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh---hcC
Q 002314 484 DLKKGVLIL-------SEFA-------GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV---TTH 546 (937)
Q Consensus 484 ~~~~g~lVl-------Se~a-------G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V---~~~ 546 (937)
.|+|+ |..+ |..+.+ .+ |+++++++|.++++++ +.+.++.+++++.+ ..+
T Consensus 477 ----~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v-~~-------~~~~la~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 477 ----CPVLTTPGETFAARVAGSLNHHLGLDEMN-VA-------DDAAFVAKAVALASDP-AALTALHARVDVLRRASGVF 543 (568)
T ss_dssp ----CCEEBCCCSSGGGSHHHHHHHHHTCGGGB-CS-------SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTT
T ss_pred ----CCEEeccCCCchHHHHHHHHHHCCChhhh-cC-------CHHHHHHHHHHHhcCH-HHHHHHHHHHHHhhhcCCCC
Confidence 78888 8877 777766 22 8999999999999864 46677777788887 779
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 002314 547 TAQEWAETFVSELNDTVV 564 (937)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~ 564 (937)
++...++.++..+++...
T Consensus 544 ~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 544 HMDGFADDFGALLQALAR 561 (568)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999887776543
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-14 Score=158.91 Aligned_cols=248 Identities=14% Similarity=0.002 Sum_probs=161.8
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+|++|.....+...++.+ ..++|+.++.|..+|.. ...++. -.+|.+...+..
T Consensus 96 ~pDvv~~~~~~~~~~~~~~~~-~~~~p~v~~~~~~~~~~--------~~~~~~--~~~d~v~~~~~~------------- 151 (364)
T 1f0k_A 96 KPDVVLGMGGYVSGPGGLAAW-SLGIPVVLHEQNGIAGL--------TNKWLA--KIATKVMQAFPG------------- 151 (364)
T ss_dssp CCSEEEECSSTTHHHHHHHHH-HTTCCEEEEECSSSCCH--------HHHHHT--TTCSEEEESSTT-------------
T ss_pred CCCEEEEeCCcCchHHHHHHH-HcCCCEEEEecCCCCcH--------HHHHHH--HhCCEEEecChh-------------
Confidence 459999997543333333333 34788888888765421 011111 135555432210
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCc-EEEEEecccccCCHHHHHHHHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKGIPQKLLAFE 386 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-iIL~VdRld~~KGi~~~l~Af~ 386 (937)
. +. ++.++|+|||.+.|.+. .. ++++ .+++ +++++||+.+.||++.+++|++
T Consensus 152 -------~--~~----~~~~i~n~v~~~~~~~~----~~-------~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~ 207 (364)
T 1f0k_A 152 -------A--FP----NAEVVGNPVRTDVLALP----LP-------QQRLAGREGPVRVLVVGGSQGARILNQTMPQVAA 207 (364)
T ss_dssp -------S--SS----SCEECCCCCCHHHHTSC----CH-------HHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred -------h--cC----CceEeCCccchhhcccc----hh-------hhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHH
Confidence 1 11 45689999999877431 11 1222 2445 4456679999999999999999
Q ss_pred HhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002314 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (937)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (937)
.+.+ + +.++.++++ ++ +. ++++++.+.+. ..|++ .|.+ +++..+|+.||++|+|
T Consensus 208 ~l~~---~----~~~l~i~G~----~~-~~----~l~~~~~~~~~-------~~v~~-~g~~--~~~~~~~~~ad~~v~~ 261 (364)
T 1f0k_A 208 KLGD---S----VTIWHQSGK----GS-QQ----SVEQAYAEAGQ-------PQHKV-TEFI--DDMAAAYAWADVVVCR 261 (364)
T ss_dssp HHGG---G----EEEEEECCT----TC-HH----HHHHHHHHTTC-------TTSEE-ESCC--SCHHHHHHHCSEEEEC
T ss_pred HhcC---C----cEEEEEcCC----ch-HH----HHHHHHhhcCC-------CceEE-ecch--hhHHHHHHhCCEEEEC
Confidence 8743 2 333333322 22 22 34444444321 13554 5666 7899999999999999
Q ss_pred CCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc-------ccc--CCceEEECCCC--HHHHHHHHHHHHcCCHHHHHHH
Q 002314 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKR 535 (937)
Q Consensus 467 Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~-------~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r 535 (937)
| | +++++|||||+ .|+|+|..+|.. +.+ ...|++|+|.| ++++|++|.++ .++.+.++
T Consensus 262 s---g-~~~~~EAma~G----~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~ 330 (364)
T 1f0k_A 262 S---G-ALTVSEIAAAG----LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTM 330 (364)
T ss_dssp C---C-HHHHHHHHHHT----CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHH
T ss_pred C---c-hHHHHHHHHhC----CCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHH
Confidence 9 4 99999999994 799999888753 233 33499999988 99999999988 45677777
Q ss_pred HHhhhhhhhcCCHHHHHHHHHHHHHHhH
Q 002314 536 HWHNFTHVTTHTAQEWAETFVSELNDTV 563 (937)
Q Consensus 536 ~~~~~~~V~~~~~~~W~~~fl~~l~~~~ 563 (937)
.+++++++..+++..-++.+++.+++..
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 331 AERARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 7888888888888888887776665543
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=6.3e-14 Score=158.78 Aligned_cols=248 Identities=13% Similarity=-0.003 Sum_probs=155.4
Q ss_pred HHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHH-hhhcCCEEEEeCHHHHHHHHH
Q 002314 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 226 ~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~-~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
.+..+| |+|+++.++++. .++.... . |+.+..+. +.. +. +.+ .+-.+|.|.+++....+.|.+
T Consensus 107 l~~~~p-Div~~~~~~~~~--~~~~~~~-~-p~~~~~~~-~~~---------~~-~~~~~~~~~d~ii~~S~~~~~~l~~ 170 (374)
T 2xci_A 107 EELSKP-KALIVVEREFWP--SLIIFTK-V-PKILVNAY-AKG---------SL-IEKILSKKFDLIIMRTQEDVEKFKT 170 (374)
T ss_dssp HHHHCC-SEEEEESCCCCH--HHHHHCC-S-CEEEEEEC-CCC---------CH-HHHHHHTTCSEEEESCHHHHHHHHT
T ss_pred HHHhCC-CEEEEECccCcH--HHHHHHh-C-CEEEEEee-cCc---------hH-HHHHHHHhCCEEEECCHHHHHHHHH
Confidence 344454 899888777653 3343322 1 55443332 211 11 222 234689999999987766543
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~A 384 (937)
+| -. +|.++|+|. |..... + ++.+ .+++++++++. .||+..+|+|
T Consensus 171 -----~g------------~~-ki~vi~n~~----f~~~~~-~---------~~~l-~~~vi~~~~~~--~k~~~~ll~A 215 (374)
T 2xci_A 171 -----FG------------AK-RVFSCGNLK----FICQKG-K---------GIKL-KGEFIVAGSIH--TGEVEIILKA 215 (374)
T ss_dssp -----TT------------CC-SEEECCCGG----GCCCCC-S---------CCCC-SSCEEEEEEEC--GGGHHHHHHH
T ss_pred -----cC------------CC-eEEEcCCCc----cCCCcC-h---------hhhh-cCCEEEEEeCC--CchHHHHHHH
Confidence 11 12 677888862 321110 0 0011 23677788774 5899999999
Q ss_pred HHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccC--CCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002314 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG--TLTAVPIHHLDRSLDFPALCALYAVTDV 462 (937)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g--~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (937)
|.++.+++|+++ |+++| ++++.. +++++++.+.+-.+. ..+...|. +.+. .+++..+|+.||+
T Consensus 216 ~~~l~~~~p~~~----lvivG-----~g~~~~---~~l~~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~~y~~aDv 280 (374)
T 2xci_A 216 FKEIKKTYSSLK----LILVP-----RHIENA---KIFEKKARDFGFKTSFFENLEGDVI-LVDR--FGILKELYPVGKI 280 (374)
T ss_dssp HHHHHTTCTTCE----EEEEE-----SSGGGH---HHHHHHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHHHGGGEEE
T ss_pred HHHHHhhCCCcE----EEEEC-----CCHHHH---HHHHHHHHHCCCceEEecCCCCcEE-EECC--HHHHHHHHHhCCE
Confidence 999998899865 77775 234321 234444444332210 00001344 3443 3789999999999
Q ss_pred EEECCC-CcCCChhHHHHHHhcCCCCceEEEe-CCCCccccc---CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 002314 463 ALVTSL-RDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (937)
Q Consensus 463 ~vv~Sl-~EG~nLv~~EamAc~~~~~g~lVlS-e~aG~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 537 (937)
+++||. .|++|++++|||||+ .|+|++ ...|+.+.+ +.+|.++.|.|++++|++|.++|++ +.|+++.+
T Consensus 281 ~vl~ss~~e~gg~~~lEAmA~G----~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg~ 354 (374)
T 2xci_A 281 AIVGGTFVNIGGHNLLEPTCWG----IPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVEE 354 (374)
T ss_dssp EEECSSSSSSCCCCCHHHHTTT----CCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHHH
T ss_pred EEECCcccCCCCcCHHHHHHhC----CCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHHH
Confidence 888764 577899999999994 677765 556666544 2478889999999999999999985 56677777
Q ss_pred hhhhhhhc
Q 002314 538 HNFTHVTT 545 (937)
Q Consensus 538 ~~~~~V~~ 545 (937)
++++++++
T Consensus 355 ~ar~~~~~ 362 (374)
T 2xci_A 355 KSREIKGC 362 (374)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777654
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.43 E-value=8.7e-12 Score=142.28 Aligned_cols=264 Identities=15% Similarity=0.140 Sum_probs=163.8
Q ss_pred HhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhh--hcCCEEEEeCHHHHHHHHH
Q 002314 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 227 ~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~l--l~aDlIgF~t~~~~~~Fl~ 304 (937)
+..+ +|+|++|+.....++..+..+..++|+++ +|.+..+...+. |+.+++.+-+ ..+|++...+....++|.+
T Consensus 108 ~~~k-PDvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~l~~ 183 (396)
T 3dzc_A 108 SSEQ-PDVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRANLLQ 183 (396)
T ss_dssp HHHC-CSEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHHHHH
T ss_pred HhcC-CCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHHH
Confidence 3344 59999998666666655555566899875 343332322222 3445565554 3579998899888777764
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEec-ccChhhhhhhhcCCchHHHHHHHHHHhc----CCcEEE-EEeccc-ccCC
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFA----GRKVML-GVDRLD-MIKG 377 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~-GID~~~f~~~~~~~~~~~~~~~lr~~~~----~~~iIL-~VdRld-~~KG 377 (937)
.|.+ ..+|.++++ ++|...+.+... ........+++++++ +++++| ..+|.. ..||
T Consensus 184 -----~G~~-----------~~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~ 246 (396)
T 3dzc_A 184 -----ENYN-----------AENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGG 246 (396)
T ss_dssp -----TTCC-----------GGGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTH
T ss_pred -----cCCC-----------cCcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhH
Confidence 2322 235666765 456443322100 000011256666664 355544 566764 4488
Q ss_pred HHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 002314 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (937)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (937)
+..+++|+..+.+++|+++ +|..+.+ .+ .+++.++++. + . ...|++ .+++.+.++..+|
T Consensus 247 ~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~---~~~~~l~~~~---~----~--~~~v~~-~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 247 FERICQALITTAEQHPECQ----ILYPVHL----NP---NVREPVNKLL---K----G--VSNIVL-IEPQQYLPFVYLM 305 (396)
T ss_dssp HHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHT---T----T--CTTEEE-ECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCce----EEEEeCC----Ch---HHHHHHHHHH---c----C--CCCEEE-eCCCCHHHHHHHH
Confidence 9999999999999888753 5443322 13 2344444432 1 1 124664 5788889999999
Q ss_pred HHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEe-CCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHH
Q 002314 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (937)
Q Consensus 458 ~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS-e~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~ 534 (937)
+.||++|.+| | |++ +||++|+ .|+|++ +.++..+.+ | .+++|.+ |.++++++|.++|+++ +.+++
T Consensus 306 ~~ad~vv~~S---G-g~~-~EA~a~G----~PvV~~~~~~~~~e~v~~G-~~~lv~~-d~~~l~~ai~~ll~d~-~~~~~ 373 (396)
T 3dzc_A 306 DRAHIILTDS---G-GIQ-EEAPSLG----KPVLVMRETTERPEAVAAG-TVKLVGT-NQQQICDALSLLLTDP-QAYQA 373 (396)
T ss_dssp HHCSEEEESC---S-GGG-TTGGGGT----CCEEECCSSCSCHHHHHHT-SEEECTT-CHHHHHHHHHHHHHCH-HHHHH
T ss_pred HhcCEEEECC---c-cHH-HHHHHcC----CCEEEccCCCcchHHHHcC-ceEEcCC-CHHHHHHHHHHHHcCH-HHHHH
Confidence 9999999999 6 666 9999994 688888 444444444 4 4677765 8999999999999864 34455
Q ss_pred HHHhhhhhhh
Q 002314 535 RHWHNFTHVT 544 (937)
Q Consensus 535 r~~~~~~~V~ 544 (937)
+.++...+-.
T Consensus 374 m~~~~~~~~~ 383 (396)
T 3dzc_A 374 MSQAHNPYGD 383 (396)
T ss_dssp HHTSCCTTCC
T ss_pred HhhccCCCcC
Confidence 4444444433
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.33 E-value=5.7e-11 Score=135.89 Aligned_cols=269 Identities=13% Similarity=0.098 Sum_probs=162.9
Q ss_pred HhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhh--cCCEEEEeCHHHHHHHHH
Q 002314 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVS 304 (937)
Q Consensus 227 ~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll--~aDlIgF~t~~~~~~Fl~ 304 (937)
+..+ +|+|++|+.-...++..+..+..++|+++ ++.+.-+...+. |+.+++.+.++ .+|++...+..+.++|.+
T Consensus 111 ~~~k-PD~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~l~~ 186 (403)
T 3ot5_A 111 AAEN-PDIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKENLLA 186 (403)
T ss_dssp HHHC-CSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HHcC-CCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHHH
Confidence 3344 59999998655555544444445889864 343332222222 33345555443 378988889888888765
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEec-ccChhhhhhhhcCCchHHHHHHHHHHhcCC-cEEEEEecccc-cCCHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFAGR-KVMLGVDRLDM-IKGIPQK 381 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~-GID~~~f~~~~~~~~~~~~~~~lr~~~~~~-~iIL~VdRld~-~KGi~~~ 381 (937)
.|.+ ..+|.++++ ++|...+....... ...++++.++ .+++.++|... .|++..+
T Consensus 187 -----~Gi~-----------~~~i~vvGn~~~D~~~~~~~~~~~------~~~~~~l~~~~~vlv~~~r~~~~~~~l~~l 244 (403)
T 3ot5_A 187 -----EGKD-----------PATIFVTGNTAIDALKTTVQKDYH------HPILENLGDNRLILMTAHRRENLGEPMQGM 244 (403)
T ss_dssp -----TTCC-----------GGGEEECCCHHHHHHHHHSCTTCC------CHHHHSCTTCEEEEECCCCHHHHTTHHHHH
T ss_pred -----cCCC-----------cccEEEeCCchHHHHHhhhhhhcc------hHHHHhccCCCEEEEEeCcccccCcHHHHH
Confidence 2321 245666665 56755443211000 0122223334 45567888754 4789999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|+..+.+++|+++ +|..+.+ .+ .+++.+++.. + . +..|++ .++++..++..+|+.||
T Consensus 245 l~a~~~l~~~~~~~~----~v~~~~~----~~---~~~~~l~~~~---~----~--~~~v~l-~~~l~~~~~~~l~~~ad 303 (403)
T 3ot5_A 245 FEAVREIVESREDTE----LVYPMHL----NP---AVREKAMAIL---G----G--HERIHL-IEPLDAIDFHNFLRKSY 303 (403)
T ss_dssp HHHHHHHHHHCTTEE----EEEECCS----CH---HHHHHHHHHH---T----T--CTTEEE-ECCCCHHHHHHHHHHEE
T ss_pred HHHHHHHHHhCCCce----EEEecCC----CH---HHHHHHHHHh---C----C--CCCEEE-eCCCCHHHHHHHHHhcC
Confidence 999999999999753 5444322 12 2334444432 1 1 124664 67889999999999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEe-CCCCccccc-CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS-e~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
++|.+| |-+.+||++|+ .|+|++ ..++..+.+ ..++++|.+ |.++++++|.++|+++ +.++++.+..
T Consensus 304 ~vv~~S-----Gg~~~EA~a~g----~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~~-~~~~~m~~~~ 372 (403)
T 3ot5_A 304 LVFTDS-----GGVQEEAPGMG----VPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNK-ESHDKMAQAA 372 (403)
T ss_dssp EEEECC-----HHHHHHGGGTT----CCEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHHHSC
T ss_pred EEEECC-----ccHHHHHHHhC----CCEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcCH-HHHHHHHhhc
Confidence 999888 33449999994 678877 444433444 236888876 9999999999999864 3444444444
Q ss_pred hhhhhcCCHHHHHH
Q 002314 540 FTHVTTHTAQEWAE 553 (937)
Q Consensus 540 ~~~V~~~~~~~W~~ 553 (937)
..+-..+.+.+.++
T Consensus 373 ~~~g~~~aa~rI~~ 386 (403)
T 3ot5_A 373 NPYGDGFAANRILA 386 (403)
T ss_dssp CTTCCSCHHHHHHH
T ss_pred CcccCCcHHHHHHH
Confidence 44444444444433
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.5e-10 Score=120.92 Aligned_cols=60 Identities=12% Similarity=0.086 Sum_probs=47.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhcccC
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYN 661 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~ 661 (937)
..++|+||+||||++.. + ....+.+.+.++++.|.+ .|..++++| ||+...+.+.+..++
T Consensus 11 ~~k~i~fDlDGTLl~s~--~---------~~~~~~~~~~~a~~~l~~-~G~~~~~~t~~~gr~~~~~~~~l~~~g 73 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSG--A---------GGGTAIAGSVEAVARLKR-SRLKVRFCTNESAASRAELVGQLQRLG 73 (271)
T ss_dssp TCCEEEECCBTTTEECC--T---------TTCEECTTHHHHHHHHHH-SSSEEEEECCCCSSCHHHHHHHHHHTT
T ss_pred cCCEEEEeCCCeEEecC--C---------CCCccCcCHHHHHHHHHH-CCCcEEEEECCCCCCHHHHHHHHHHCC
Confidence 46899999999999852 0 023356788899999987 599999999 999998888777653
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.7e-09 Score=114.09 Aligned_cols=181 Identities=12% Similarity=0.083 Sum_probs=106.4
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhcccCc---
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL--- 662 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~l--- 662 (937)
.+.+.|+||+||||++.. .+.+.++++|++|.+ .|..|+++| ||+...+.+.+..+++
T Consensus 15 ~~~~~v~~DlDGTLl~~~---------------~~~~~~~~~l~~l~~-~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~ 78 (271)
T 1vjr_A 15 DKIELFILDMDGTFYLDD---------------SLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP 78 (271)
T ss_dssp GGCCEEEECCBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCCCC
T ss_pred cCCCEEEEcCcCcEEeCC---------------EECcCHHHHHHHHHH-cCCeEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 356899999999999762 256789999999987 599999999 9999999888877643
Q ss_pred --eEEeeCceEEEec-----CCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHH
Q 002314 663 --WLAAENGMFLRCT-----TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (937)
Q Consensus 663 --~liaenG~~ir~~-----~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~ 735 (937)
.++++||+.+... +..... ... ..+.+.++.. |..+........+........+ ..+.
T Consensus 79 ~~~ii~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~l~~~-----g~~~~~~~~~~~~~~~~~~~~~--~~~~ 143 (271)
T 1vjr_A 79 DDAVVTSGEITAEHMLKRFGRCRIFL----LGT----PQLKKVFEAY-----GHVIDEENPDFVVLGFDKTLTY--ERLK 143 (271)
T ss_dssp GGGEEEHHHHHHHHHHHHHCSCEEEE----ESC----HHHHHHHHHT-----TCEECSSSCSEEEECCCTTCCH--HHHH
T ss_pred hhhEEcHHHHHHHHHHHhCCCCeEEE----EcC----HHHHHHHHHc-----CCccCCCCCCEEEEeCCCCcCH--HHHH
Confidence 3667776643210 011000 001 1122222221 1111111111111111111011 1122
Q ss_pred HHHHHHhcCCCCCCCeEEEEcC------------------------eEEEE-EECCCCHHHHHHHHHHHhcccccCCCCC
Q 002314 736 DMLQHLWTGPISNASVEVVQGS------------------------KSVEV-RAVGVTKGAAIDRILAEIVHSKKMKTAI 790 (937)
Q Consensus 736 el~~~L~~~~~~~~~v~v~~Gk------------------------~~vEV-~p~gvnKG~Av~~Ll~~l~~~~~~~~~~ 790 (937)
+++..+ .. ...+ +.... ...|. .+.+.+|+.+++.++++++ +++
T Consensus 144 ~~l~~l-~~---~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg------i~~ 212 (271)
T 1vjr_A 144 KACILL-RK---GKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFG------VPK 212 (271)
T ss_dssp HHHHHH-TT---TCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHT------CCG
T ss_pred HHHHHH-HC---CCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhC------CCC
Confidence 333333 21 1111 11110 12355 7788999999999999998 578
Q ss_pred ceEEEEecCC-CCcHHHHHhcCc
Q 002314 791 DYVLCIGHFL-GKDEDVYAFFEP 812 (937)
Q Consensus 791 d~vl~iGD~d-~nDEdMf~~~~~ 812 (937)
+++++||| + .||.+|++.++-
T Consensus 213 ~e~i~iGD-~~~nDi~~a~~aG~ 234 (271)
T 1vjr_A 213 ERMAMVGD-RLYTDVKLGKNAGI 234 (271)
T ss_dssp GGEEEEES-CHHHHHHHHHHHTC
T ss_pred ceEEEECC-CcHHHHHHHHHcCC
Confidence 99999999 9 599999999864
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.95 E-value=5.2e-09 Score=111.76 Aligned_cols=67 Identities=13% Similarity=0.219 Sum_probs=52.9
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhcccCc----
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL---- 662 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~l---- 662 (937)
+.|+|+||+||||++.. .+.++++++|++|.+ .|..|+++|| |+...+.+.+..+++
T Consensus 7 ~~kli~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~ 70 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKSV---------------TPIPEGVEGVKKLKE-LGKKIIFVSNNSTRSRRILLERLRSFGLEVGE 70 (268)
T ss_dssp CCSEEEEECBTTTEETT---------------EECHHHHHHHHHHHH-TTCEEEEEECCSSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEcCcCcEECCC---------------EeCcCHHHHHHHHHH-cCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCH
Confidence 47899999999999752 245789999999987 5999999999 777777777776654
Q ss_pred -eEEeeCceEE
Q 002314 663 -WLAAENGMFL 672 (937)
Q Consensus 663 -~liaenG~~i 672 (937)
.+++.||+..
T Consensus 71 ~~ii~~~~~~~ 81 (268)
T 3qgm_A 71 DEILVATYATA 81 (268)
T ss_dssp GGEEEHHHHHH
T ss_pred HHeeCHHHHHH
Confidence 3666666643
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.5e-09 Score=115.97 Aligned_cols=188 Identities=9% Similarity=0.073 Sum_probs=104.5
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhcccCc----
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL---- 662 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~l---- 662 (937)
+.|+|+||+||||++. ..+.++++++|++|.+ .|..|+++|| |+...+.+.+..+++
T Consensus 5 ~~kli~~DlDGTLl~~---------------~~~~~~~~~ai~~l~~-~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~ 68 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNG---------------TEKIEEACEFVRTLKD-RGVPYLFVTNNSSRTPKQVADKLVSFDIPATE 68 (266)
T ss_dssp CCSEEEEECSSSTTCH---------------HHHHHHHHHHHHHHHH-TTCCEEEEESCCSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEeCcCceEeC---------------CEeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH
Confidence 4789999999999975 2245789999999987 5999999988 777777777776654
Q ss_pred -eEEeeCceEEEe--cCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHH
Q 002314 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (937)
Q Consensus 663 -~liaenG~~ir~--~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~ 739 (937)
.++..+|+.+.. ......... .... ..+.+.++.. |..+........+........+ ....+...
T Consensus 69 ~~ii~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 136 (266)
T 3pdw_A 69 EQVFTTSMATAQHIAQQKKDASVY-VIGE----EGIRQAIEEN-----GLTFGGENADFVVVGIDRSITY--EKFAVGCL 136 (266)
T ss_dssp GGEEEHHHHHHHHHHHHCTTCEEE-EESC----HHHHHHHHHT-----TCEECCTTCSEEEECCCTTCCH--HHHHHHHH
T ss_pred HHccCHHHHHHHHHHhhCCCCEEE-EEeC----hhHHHHHHHc-----CCccCCCCCCEEEEeCCCCCCH--HHHHHHHH
Confidence 355555544321 000000000 0011 1222233221 2222111111111100000011 11122222
Q ss_pred HHhcC---CCCCCCeEE------EEc----------CeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCC
Q 002314 740 HLWTG---PISNASVEV------VQG----------SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (937)
Q Consensus 740 ~L~~~---~~~~~~v~v------~~G----------k~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 800 (937)
.+... +..+..... ..+ -...|+.+.+..|+.+++.++++++ ++++++++||| +
T Consensus 137 ~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~ 209 (266)
T 3pdw_A 137 AIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLG------TDVSETLMVGD-N 209 (266)
T ss_dssp HHHTTCEEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHT------CCGGGEEEEES-C
T ss_pred HHHCCCeEEEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcC------CChhhEEEECC-C
Confidence 22011 001111110 111 0124567788899999999999998 67899999999 9
Q ss_pred -CCcHHHHHhcCc
Q 002314 801 -GKDEDVYAFFEP 812 (937)
Q Consensus 801 -~nDEdMf~~~~~ 812 (937)
.||.+|++.++-
T Consensus 210 ~~~Di~~~~~aG~ 222 (266)
T 3pdw_A 210 YATDIMAGINAGM 222 (266)
T ss_dssp TTTHHHHHHHHTC
T ss_pred cHHHHHHHHHCCC
Confidence 799999999975
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=4.7e-08 Score=109.06 Aligned_cols=244 Identities=12% Similarity=0.035 Sum_probs=150.3
Q ss_pred HHHhCCCCCEEEEeCcccc--hH-HHHHHhh-CCCCeEEEEEccCCCchhhhccCccc-hHHHHhhhcCCEEEEeCHHHH
Q 002314 225 VNKHYKDGDVVWCHDYHLM--FL-PKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDYA 299 (937)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~--ll-p~~Lr~~-~~~~~I~~flH~PfPs~e~fr~lp~r-~eil~~ll~aDlIgF~t~~~~ 299 (937)
+...++++|+|+++-+.+. .+ ..++++. ..++|+.+++|--||-.- ..-+.. ..-...+-.||.|..+++...
T Consensus 68 ~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~--~~~~~~~~~E~~~y~~aD~Ii~~S~~~~ 145 (339)
T 3rhz_A 68 IVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMF--SGNFYLMDRTIAYYNKADVVVAPSQKMI 145 (339)
T ss_dssp HTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHC--GGGGGGHHHHHHHHTTCSEEEESCHHHH
T ss_pred HHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhC--ccchhhHHHHHHHHHHCCEEEECCHHHH
Confidence 5556889999999877653 22 2334432 238999999998766321 100011 111223447999999998766
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeeEEEEEeccc-ChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCH
Q 002314 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (937)
Q Consensus 300 ~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi 378 (937)
+.+.+ .|.+ ..++. ++++ |.. .+ .+. ....++++|+|+||+....++
T Consensus 146 ~~l~~-----~G~~-----------~~ki~--~~~~~~~~--~~---~~~---------~~~~~~~~i~yaG~l~k~~~L 193 (339)
T 3rhz_A 146 DKLRD-----FGMN-----------VSKTV--VQGMWDHP--TQ---APM---------FPAGLKREIHFPGNPERFSFV 193 (339)
T ss_dssp HHHHH-----TTCC-----------CSEEE--ECCSCCCC--CC---CCC---------CCCEEEEEEEECSCTTTCGGG
T ss_pred HHHHH-----cCCC-----------cCcee--ecCCCCcc--Cc---ccc---------cccCCCcEEEEeCCcchhhHH
Confidence 55543 1221 13333 3333 211 00 000 011346789999999853222
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (937)
. + + .|+++ |+++|.+. +. + .. .|+| .|.++.+|+..+|+
T Consensus 194 ~----~---l---~~~~~----f~ivG~G~-----~~------------~-------l~--nV~f-~G~~~~~el~~~l~ 232 (339)
T 3rhz_A 194 K----E---W---KYDIP----LKVYTWQN-----VE------------L-------PQ--NVHK-INYRPDEQLLMEMS 232 (339)
T ss_dssp G----G---C---CCSSC----EEEEESCC-----CC------------C-------CT--TEEE-EECCCHHHHHHHHH
T ss_pred H----h---C---CCCCe----EEEEeCCc-----cc------------C-------cC--CEEE-eCCCCHHHHHHHHH
Confidence 1 1 1 35554 88887432 10 0 11 4775 68999999999999
Q ss_pred HccEEEECCCCc---------CCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcC
Q 002314 459 VTDVALVTSLRD---------GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 527 (937)
Q Consensus 459 ~ADv~vv~Sl~E---------G~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m 527 (937)
.||+.++. .+ .++.-++|||||+ .|+|++..++..+.+ +..|+.++ +.++++++|..+
T Consensus 233 ~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G----~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l--- 301 (339)
T 3rhz_A 233 QGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG----IPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV--- 301 (339)
T ss_dssp TEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT----CCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC---
T ss_pred hCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC----CCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh---
Confidence 99999887 23 3477899999994 799999988888877 45789887 578888888763
Q ss_pred CHHHHHHHHHhhhhhhhcCCHHHHHHH
Q 002314 528 SPEEREKRHWHNFTHVTTHTAQEWAET 554 (937)
Q Consensus 528 ~~~er~~r~~~~~~~V~~~~~~~W~~~ 554 (937)
.++++.++.++++++.+...+..-.++
T Consensus 302 ~~~~~~~m~~na~~~a~~~~~~~f~k~ 328 (339)
T 3rhz_A 302 NEDEYIELVKNVRSFNPILRKGFFTRR 328 (339)
T ss_dssp CHHHHHHHHHHHHHHTHHHHTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 466777777777776554443333333
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.2e-07 Score=107.69 Aligned_cols=241 Identities=10% Similarity=0.056 Sum_probs=141.1
Q ss_pred HhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhh--cCCEEEEeCHHHHHHHHH
Q 002314 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVS 304 (937)
Q Consensus 227 ~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll--~aDlIgF~t~~~~~~Fl~ 304 (937)
+..+ +|+|.+|+.-...++ .+.....++|+++ ++.+..+.+ + ++.+++.+-+. .+|++...+..+.++|.+
T Consensus 91 ~~~k-PD~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~--~--~~pee~nR~~~~~~a~~~~~~te~~~~~l~~ 163 (385)
T 4hwg_A 91 EKEK-PDAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFD--Q--RVPEEINRKIIDHISDVNITLTEHARRYLIA 163 (385)
T ss_dssp HHHC-CSEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSC--T--TSTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HhcC-CcEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCcccc--c--cCcHHHHHHHHHhhhceeecCCHHHHHHHHH
Confidence 3445 599999985544445 4444445788764 343332211 1 22234444443 478888888888777765
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEec-ccChhhhhhhhcCCchHHHHHHHHHHhc---CCcEEEEEeccc---ccCC
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLD---MIKG 377 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~-GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIL~VdRld---~~KG 377 (937)
.|.+ ..+|.++++ ++|.-.+.... .....++++++ ++.+++..+|.. ..|+
T Consensus 164 -----~G~~-----------~~~I~vtGnp~~D~~~~~~~~------~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~ 221 (385)
T 4hwg_A 164 -----EGLP-----------AELTFKSGSHMPEVLDRFMPK------ILKSDILDKLSLTPKQYFLISSHREENVDVKNN 221 (385)
T ss_dssp -----TTCC-----------GGGEEECCCSHHHHHHHHHHH------HHHCCHHHHTTCCTTSEEEEEECCC-----CHH
T ss_pred -----cCCC-----------cCcEEEECCchHHHHHHhhhh------cchhHHHHHcCCCcCCEEEEEeCCchhcCcHHH
Confidence 2322 234555554 56643332100 11223455553 344555677754 4478
Q ss_pred HHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHh-hcccCCCCcccEEEeCCCCCHHHHHHH
Q 002314 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI-NGRFGTLTAVPIHHLDRSLDFPALCAL 456 (937)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~I-N~~~g~~~~~pV~~~~~~v~~~el~al 456 (937)
+..+++|+..+.+++ ++. +|... .+. +++.++ ++ +. .+ ....|+ +.+.+++.++..+
T Consensus 222 l~~ll~al~~l~~~~-~~~----vv~p~------~p~---~~~~l~----~~~~~-~~--~~~~v~-l~~~lg~~~~~~l 279 (385)
T 4hwg_A 222 LKELLNSLQMLIKEY-NFL----IIFST------HPR---TKKRLE----DLEGF-KE--LGDKIR-FLPAFSFTDYVKL 279 (385)
T ss_dssp HHHHHHHHHHHHHHH-CCE----EEEEE------CHH---HHHHHH----TSGGG-GG--TGGGEE-ECCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-CeE----EEEEC------ChH---HHHHHH----HHHHH-hc--CCCCEE-EEcCCCHHHHHHH
Confidence 999999999987765 432 33222 132 233332 22 10 00 112465 4678889999999
Q ss_pred HHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC-ccccc-CCceEEECCCCHHHHHHHHHHHHcCC
Q 002314 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQSL-GAGAILVNPWNITEVANAIARALNMS 528 (937)
Q Consensus 457 y~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG-~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~ 528 (937)
|+.||+++..| |.+..||++++ .|+|+....+ -.+.+ ..++++|.+ |.+++++++.++|+++
T Consensus 280 ~~~adlvvt~S-----Ggv~~EA~alG----~Pvv~~~~~ter~e~v~~G~~~lv~~-d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 280 QMNAFCILSDS-----GTITEEASILN----LPALNIREAHERPEGMDAGTLIMSGF-KAERVLQAVKTITEEH 343 (385)
T ss_dssp HHHCSEEEECC-----TTHHHHHHHTT----CCEEECSSSCSCTHHHHHTCCEECCS-SHHHHHHHHHHHHTTC
T ss_pred HHhCcEEEECC-----ccHHHHHHHcC----CCEEEcCCCccchhhhhcCceEEcCC-CHHHHHHHHHHHHhCh
Confidence 99999999887 44679999994 5666654332 22334 125677765 8999999999999876
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.6e-08 Score=102.04 Aligned_cols=114 Identities=19% Similarity=0.196 Sum_probs=85.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG 669 (937)
..|+|+||+||||++....- ..-.+....++++..++|++|.+ .|..++|+|||+...+...+..+++.-.- +|
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~L~~-~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~-~~ 80 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHY----DANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGIKLFF-LG 80 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTCCEEE-ES
T ss_pred CCeEEEEeCCCCcCCCCeee----ccCcceeeeeccchHHHHHHHHH-CCCeEEEEeCCCcHHHHHHHHHcCCceee-cC
Confidence 46899999999999752100 00000122466788999999987 59999999999998888877765432100 00
Q ss_pred eEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCC
Q 002314 670 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 749 (937)
Q Consensus 670 ~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~ 749 (937)
T Consensus 81 -------------------------------------------------------------------------------- 80 (180)
T 1k1e_A 81 -------------------------------------------------------------------------------- 80 (180)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 750 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 750 ~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+|+.+++.++++++ ++++.+++||| +.||.+|++.++-
T Consensus 81 ----------------~k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~~~~ag~ 120 (180)
T 1k1e_A 81 ----------------KLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPAFAACGT 120 (180)
T ss_dssp ----------------CSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred ----------------CCCcHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHcCC
Confidence 0579999999999998 56899999999 9999999999975
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.77 E-value=1.9e-08 Score=107.46 Aligned_cols=188 Identities=8% Similarity=0.047 Sum_probs=104.9
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhcccCc----
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~l---- 662 (937)
+.|+|+||+||||++. +..+ ++++++|++|.+ .|..|+++| ||+...+...+..+++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i-~~~~eal~~l~~-~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~ 67 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKG--------------KSRI-PAGERFIERLQE-KGIPYMLVTNNTTRTPESVQEMLRGFNVETPL 67 (264)
T ss_dssp CCCEEEECCBTTTEET--------------TEEC-HHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG
T ss_pred CCCEEEEeCCCceEeC--------------CEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 4789999999999986 2446 799999999987 599999999 8899888888887654
Q ss_pred -eEEeeCceEEEe--cCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHH
Q 002314 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (937)
Q Consensus 663 -~liaenG~~ir~--~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~ 739 (937)
.+++.+|+.+.. ......... .... +.+.+.++.. |..+........+... +..+......+...
T Consensus 68 ~~ii~~~~~~~~~l~~~~~~~~~~-~~~~----~~l~~~l~~~-----g~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~ 135 (264)
T 3epr_A 68 ETIYTATMATVDYMNDMNRGKTAY-VIGE----EGLKKAIADA-----GYVEDTKNPAYVVVGL--DWNVTYDKLATATL 135 (264)
T ss_dssp GGEEEHHHHHHHHHHHHTCCSEEE-EESC----HHHHHHHHHT-----TCEECSSSCSEEEECC--CTTCCHHHHHHHHH
T ss_pred hheecHHHHHHHHHHHhCCCCeEE-EECC----HHHHHHHHHc-----CCcccCCcCCEEEEeC--CCCCCHHHHHHHHH
Confidence 356666664331 000000010 0011 1223333321 2222211111111111 11110011112222
Q ss_pred HHhcC---CCCCCCeEEEEcCe----------------EEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCC
Q 002314 740 HLWTG---PISNASVEVVQGSK----------------SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (937)
Q Consensus 740 ~L~~~---~~~~~~v~v~~Gk~----------------~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 800 (937)
.+... +..+.......... ..|....+-.|+.+++.++++++ ++++++++||| .
T Consensus 136 ~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~ 208 (264)
T 3epr_A 136 AIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILN------IPRNQAVMVGD-N 208 (264)
T ss_dssp HHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHT------SCGGGEEEEES-C
T ss_pred HHHCCCeEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhC------cCcccEEEECC-C
Confidence 22011 01111111111110 12344556677888999999998 57899999999 9
Q ss_pred -CCcHHHHHhcCc
Q 002314 801 -GKDEDVYAFFEP 812 (937)
Q Consensus 801 -~nDEdMf~~~~~ 812 (937)
.||..|.+.++-
T Consensus 209 ~~~Di~~a~~aG~ 221 (264)
T 3epr_A 209 YLTDIMAGINNDI 221 (264)
T ss_dssp TTTHHHHHHHHTC
T ss_pred cHHHHHHHHHCCC
Confidence 799999999874
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.76 E-value=2.5e-09 Score=111.21 Aligned_cols=46 Identities=13% Similarity=-0.060 Sum_probs=41.9
Q ss_pred EEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCC-CCcHHHHHhcCc
Q 002314 760 VEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKDEDVYAFFEP 812 (937)
Q Consensus 760 vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d-~nDEdMf~~~~~ 812 (937)
.|+.+.+.+|+.+++.++++++ ++++++++||| + .||.+|++.++-
T Consensus 169 ~~~~~~~kpk~~~~~~~~~~lg------i~~~~~i~iGD-~~~nDi~~~~~aG~ 215 (250)
T 2c4n_A 169 RKPFYVGKPSPWIIRAALNKMQ------AHSEETVIVGD-NLRTDILAGFQAGL 215 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHHT------CCGGGEEEEES-CTTTHHHHHHHTTC
T ss_pred CCceEeCCCCHHHHHHHHHHcC------CCcceEEEECC-CchhHHHHHHHcCC
Confidence 4677899999999999999998 57899999999 9 799999999975
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.63 E-value=8.5e-08 Score=96.56 Aligned_cols=38 Identities=24% Similarity=0.201 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
.+|+.+++.+++.++ ++++.+++||| +.||.+|++.++
T Consensus 85 ~~k~~~l~~~~~~~~------~~~~~~~~vGD-~~nD~~~~~~ag 122 (176)
T 3mmz_A 85 DRKDLALKQWCEEQG------IAPERVLYVGN-DVNDLPCFALVG 122 (176)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred CChHHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHHHHHCC
Confidence 679999999999998 57899999999 999999999875
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.61 E-value=2.9e-10 Score=126.41 Aligned_cols=65 Identities=6% Similarity=-0.124 Sum_probs=46.9
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCh---hhHH---HHh--cc
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLD---KNF--QE 659 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~---~~~--~~ 659 (937)
....++|+||+||||++.. . .++|.++.. .+..++++|||+. ..+. .++ ..
T Consensus 18 ~~~~kli~fDlDGTLld~~-------------~-------~~~l~~~~~-~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~ 76 (332)
T 1y8a_A 18 YFQGHMFFTDWEGPWILTD-------------F-------ALELCMAVF-NNARFFSNLSEYDDYLAYEVRREGYEAGYT 76 (332)
T ss_dssp --CCCEEEECSBTTTBCCC-------------H-------HHHHHHHHH-CCHHHHHHHHHHHHHHHHTTCCTTCCTTTH
T ss_pred CCCceEEEEECcCCCcCcc-------------H-------HHHHHHHHH-CCCEEEEEcCCCchhhhhhhhccCeechhh
Confidence 3457899999999999862 1 167777765 4788999999998 6665 555 44
Q ss_pred cC--ceEEeeCceEEE
Q 002314 660 YN--LWLAAENGMFLR 673 (937)
Q Consensus 660 ~~--l~liaenG~~ir 673 (937)
++ ..+++.||+.+.
T Consensus 77 l~~~~~~i~~nGa~i~ 92 (332)
T 1y8a_A 77 LKLLTPFLAAAGVKNR 92 (332)
T ss_dssp HHHHHHHHHHTTCCHH
T ss_pred cCCcCeEEEcCCcEEE
Confidence 42 357888999875
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.2e-07 Score=103.75 Aligned_cols=186 Identities=14% Similarity=0.082 Sum_probs=103.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhcccCc----
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~l---- 662 (937)
+.++|+||+||||++.. .+.+.+.++|++|.+ .|..|+++| ||+...+...+..+++
T Consensus 20 ~~k~i~~D~DGTL~~~~---------------~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~ 83 (306)
T 2oyc_A 20 RAQGVLFDCDGVLWNGE---------------RAVPGAPELLERLAR-AGKAALFVSNNSRRARPELALRFARLGFGGLR 83 (306)
T ss_dssp HCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTCCSCC
T ss_pred hCCEEEECCCCcEecCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHhcCCCcCC
Confidence 46899999999999752 245689999999987 599999999 6888888777776543
Q ss_pred --eEEeeCceEEEe--c--------CCeeeeccccccChhHHHHHHHHHHHHHhc-CCC---ceeeeecceEEEEeeccC
Q 002314 663 --WLAAENGMFLRC--T--------TGKWMTTMPEHLNMEWVDSLKHVFEYFTER-TPR---SHFEQRETSLVWNYKYAD 726 (937)
Q Consensus 663 --~liaenG~~ir~--~--------~~~w~~~~~~~~~~~w~~~v~~il~~~~~~-~~G---s~iE~K~~sl~~hyr~ad 726 (937)
.++..||+.+.. . +.. .... .. ..+...+....-. ... .+.........+.....
T Consensus 84 ~~~i~~~~~~~~~~l~~~~~~~~~~~~~-v~~~---g~----~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~- 154 (306)
T 2oyc_A 84 AEQLFSSALCAARLLRQRLPGPPDAPGA-VFVL---GG----EGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDE- 154 (306)
T ss_dssp GGGEEEHHHHHHHHHHHHCCSCSSSCCE-EEEE---SC----HHHHHHHHHTTCEETTSCCCC---CCCEEEEEECCCT-
T ss_pred hhhEEcHHHHHHHHHHhhCCccccCCCe-EEEE---CC----HHHHHHHHHCCCEeecccccccccCCCCCEEEEeCCC-
Confidence 355555543321 0 000 0000 01 1122222221100 000 01111122222222111
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCe-E------------------------EEEEECCCCHHHHHHHHHHHhc
Q 002314 727 VEFGRIQARDMLQHLWTGPISNASVEVVQGSK-S------------------------VEVRAVGVTKGAAIDRILAEIV 781 (937)
Q Consensus 727 ~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~-~------------------------vEV~p~gvnKG~Av~~Ll~~l~ 781 (937)
......+.+++..+ ... . .+-++.++. . .|....+..|+.+++.++++++
T Consensus 155 -~~~~~~~~~~l~~l-~~~--g-~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg 229 (306)
T 2oyc_A 155 -HFSFAKLREACAHL-RDP--E-CLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFS 229 (306)
T ss_dssp -TCCHHHHHHHHHHH-TST--T-SEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSC
T ss_pred -CCCHHHHHHHHHHH-HcC--C-CEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcC
Confidence 11111234555555 221 1 122222111 1 1234567788999999999998
Q ss_pred ccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 782 HSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 782 ~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
++++++++||| .. ||..|.+.++-
T Consensus 230 ------i~~~e~l~vGD-~~~~Di~~a~~aG~ 254 (306)
T 2oyc_A 230 ------IDPARTLMVGD-RLETDILFGHRCGM 254 (306)
T ss_dssp ------CCGGGEEEEES-CTTTHHHHHHHHTC
T ss_pred ------CChHHEEEECC-CchHHHHHHHHCCC
Confidence 57899999999 95 99999999864
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=98.55 E-value=2.8e-06 Score=89.39 Aligned_cols=42 Identities=19% Similarity=0.067 Sum_probs=36.6
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
..+-.|+.+++.++++++ ++++++++||| +. ||..|.+.++-
T Consensus 176 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~a~~aG~ 218 (259)
T 2ho4_A 176 VVGKPEKTFFLEALRDAD------CAPEEAVMIGD-DCRDDVDGAQNIGM 218 (259)
T ss_dssp ECSTTSHHHHHHHGGGGT------CCGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred EecCCCHHHHHHHHHHcC------CChHHEEEECC-CcHHHHHHHHHCCC
Confidence 345678999999999998 57899999999 98 99999999864
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=4e-07 Score=92.45 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=80.5
Q ss_pred HhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEe
Q 002314 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAA 666 (937)
Q Consensus 587 ~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~lia 666 (937)
+....++|+||+||||++....- ....+...........+|++|.+ .|..++|+||++...++.++..+++...
T Consensus 22 ~~~~ik~vifD~DGTL~~~~~~~----~~~~~~~~~~~~~d~~~l~~L~~-~g~~v~ivT~~~~~~~~~~l~~lgl~~~- 95 (188)
T 2r8e_A 22 KAENIRLLILDVDGVLSDGLIYM----GNNGEELKAFNVRDGYGIRCALT-SDIEVAIITGRKAKLVEDRCATLGITHL- 95 (188)
T ss_dssp HHHTCSEEEECCCCCCBCSEEEE----ETTSCEEEEEEHHHHHHHHHHHT-TTCEEEEECSSCCHHHHHHHHHHTCCEE-
T ss_pred HHhcCCEEEEeCCCCcCCCCEEe----cCCCcEEEEeecccHHHHHHHHH-CCCeEEEEeCCChHHHHHHHHHcCCcee-
Confidence 44578999999999999832100 00000011122233457888876 5899999999998887777765443211
Q ss_pred eCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCC
Q 002314 667 ENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPI 746 (937)
Q Consensus 667 enG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~ 746 (937)
+
T Consensus 96 ----------------~--------------------------------------------------------------- 96 (188)
T 2r8e_A 96 ----------------Y--------------------------------------------------------------- 96 (188)
T ss_dssp ----------------E---------------------------------------------------------------
T ss_pred ----------------e---------------------------------------------------------------
Confidence 0
Q ss_pred CCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 747 SNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 747 ~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+.+..|+.+++.++++++ ++++.+++||| +.||..|++.++-
T Consensus 97 -----------------~~~kpk~~~~~~~~~~~g------~~~~~~~~iGD-~~~Di~~a~~ag~ 138 (188)
T 2r8e_A 97 -----------------QGQSNKLIAFSDLLEKLA------IAPENVAYVGD-DLIDWPVMEKVGL 138 (188)
T ss_dssp -----------------CSCSCSHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHHHTTSSE
T ss_pred -----------------cCCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 013578999999999988 56789999999 9999999987753
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.5e-06 Score=88.73 Aligned_cols=39 Identities=18% Similarity=0.029 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-+|+.+++.+++.++ ++++.+++||| +.||.+|++.++-
T Consensus 93 kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~~~~ag~ 131 (191)
T 3n1u_A 93 VDKRSAYQHLKKTLG------LNDDEFAYIGD-DLPDLPLIQQVGL 131 (191)
T ss_dssp SSCHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred CChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 478999999999998 56899999999 9999999998853
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.44 E-value=4.2e-07 Score=89.49 Aligned_cols=114 Identities=18% Similarity=0.058 Sum_probs=83.0
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG 669 (937)
..++|+||+||||++..... ....+....+++.+.++|++|.+ .|..++|+||++...++..+..+++...
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl~~~---- 78 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYY----TEHGETIKVFNVLDGIGIKLLQK-MGITLAVISGRDSAPLITRLKELGVEEI---- 78 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHT-TTCEEEEEESCCCHHHHHHHHHTTCCEE----
T ss_pred ceeEEEEecCcceECCceee----cCCCceeeeecccHHHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCHhh----
Confidence 46899999999999752100 00000123456788999999986 5899999999998888887766543210
Q ss_pred eEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCC
Q 002314 670 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 749 (937)
Q Consensus 670 ~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~ 749 (937)
+ .
T Consensus 79 -------------~-~---------------------------------------------------------------- 80 (162)
T 2p9j_A 79 -------------Y-T---------------------------------------------------------------- 80 (162)
T ss_dssp -------------E-E----------------------------------------------------------------
T ss_pred -------------c-c----------------------------------------------------------------
Confidence 0 0
Q ss_pred CeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 750 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 750 ~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+..|..+++.++++++ .+++.+++||| +.+|..|.+.++-
T Consensus 81 ---------------~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~ag~ 121 (162)
T 2p9j_A 81 ---------------GSYKKLEIYEKIKEKYS------LKDEEIGFIGD-DVVDIEVMKKVGF 121 (162)
T ss_dssp ---------------CC--CHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred ---------------CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 03468889999999988 56899999999 9999999999875
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=7e-07 Score=90.29 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+.+|+.++..++++++ ++++++++||| +.||.+|++.++-
T Consensus 140 ~~~~K~~~l~~~~~~lg------i~~~~~~~iGD-~~~Di~~~~~ag~ 180 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISMFKKAGL 180 (211)
T ss_dssp STTHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHCSE
T ss_pred CCccHHHHHHHHHHHcC------CCHHHEEEEec-ChhHHHHHHHCCC
Confidence 47799999999999998 57899999999 9999999999864
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=6.5e-06 Score=92.89 Aligned_cols=158 Identities=15% Similarity=0.061 Sum_probs=101.4
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (937)
...+++++|++. .|+...+..+++.+.+ .+ + .++.++++.. ..+ ++++ +. ..|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~-~~-~----~~~~~~g~~~-~~~-------~l~~----~~--------~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAG-LD-A----DVLVASGPSL-DVS-------GLGE----VP--------ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHT-SS-S----EEEEECCSSC-CCT-------TCCC----CC--------TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHc-CC-C----EEEEEECCCC-Chh-------hhcc----CC--------CcE
Confidence 345678899996 6676666666665533 22 2 2344433221 011 1110 10 135
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECCC--C
Q 002314 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW--N 513 (937)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~--D 513 (937)
.+ .++++ +..+|+.||+||.+| | ..+++|||+|+ .|+|+....+ .++.+ +..|++++|. |
T Consensus 295 ~~-~~~~~---~~~~l~~ad~~v~~~---g-~~t~~Ea~a~G----~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~ 362 (412)
T 3otg_A 295 RL-ESWVP---QAALLPHVDLVVHHG---G-SGTTLGALGAG----VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS 362 (412)
T ss_dssp EE-ESCCC---HHHHGGGCSEEEESC---C-HHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC
T ss_pred EE-eCCCC---HHHHHhcCcEEEECC---c-hHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence 54 56764 778899999999776 2 36889999994 6778755443 44544 3468999987 9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHH
Q 002314 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 514 ~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 559 (937)
.++++++|.++|+++ +.++++.+..+++...+++..-++.+.+-+
T Consensus 363 ~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 363 PDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999999999999865 455555566667777788777776554433
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.3e-06 Score=86.11 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-.|..+++.++++++ ++++.+++||| +.||..|++.++-
T Consensus 78 kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~~~~ag~ 116 (164)
T 3e8m_A 78 VDKLSAAEELCNELG------INLEQVAYIGD-DLNDAKLLKRVGI 116 (164)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEECC-SGGGHHHHTTSSE
T ss_pred CChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 579999999999998 57899999999 9999999999865
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.35 E-value=2.3e-06 Score=87.08 Aligned_cols=38 Identities=24% Similarity=0.202 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
.+|+.+++.+++.++ ++++.+++||| +.||.+|++.++
T Consensus 93 ~~K~~~~~~~~~~~g------~~~~~~~~vGD-~~nDi~~~~~ag 130 (189)
T 3mn1_A 93 EDKLVVLDKLLAELQ------LGYEQVAYLGD-DLPDLPVIRRVG 130 (189)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred CChHHHHHHHHHHcC------CChhHEEEECC-CHHHHHHHHHCC
Confidence 689999999999998 57899999999 999999999875
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.33 E-value=6.4e-07 Score=87.10 Aligned_cols=69 Identities=16% Similarity=0.135 Sum_probs=51.5
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC---hhhHHHHhcccC--ceE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQEYN--LWL 664 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~---~~~L~~~~~~~~--l~l 664 (937)
+.++||+|+||||++... | ....+.+.++++|++|.+ .|+.|+|+|||+ +..+..++...+ ..+
T Consensus 2 ~~k~i~~DlDGTL~~~~~-~---------~i~~~~~~~~~al~~l~~-~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~ 70 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRY-P---------RIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLEFYA 70 (142)
T ss_dssp CCCEEEECCBTTTBCSCT-T---------SCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCCCSE
T ss_pred CCeEEEEECcCCCCCCCC-c---------cccccCHHHHHHHHHHHH-CCCEEEEEeCCCcccHHHHHHHHHHcCCCeEE
Confidence 368999999999998531 1 012345689999999987 599999999998 566777777764 346
Q ss_pred EeeCc
Q 002314 665 AAENG 669 (937)
Q Consensus 665 iaenG 669 (937)
++.|+
T Consensus 71 I~~n~ 75 (142)
T 2obb_A 71 ANKDY 75 (142)
T ss_dssp ESSSS
T ss_pred EEcCC
Confidence 66654
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.33 E-value=5.1e-05 Score=92.07 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=106.1
Q ss_pred CCcEEEEEecccccCCHHHH-HHHHHHhH--HhCcCccC-cEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQK-LLAFEKFL--EENSDWRG-KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~-l~Af~~ll--~~~P~~~~-~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
+..+++.|.|+..-||.... |..+++++ ..+|+.-- .+++|..|....++ ...+.+-+.+.+++..+|..=...+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~~ 627 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccCC
Confidence 56788899999999999998 88888885 35664311 35677676554333 2234556667888888864211122
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCcccc----cC-CceEEEC
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----LG-AGAILVN 510 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~----lg-~~gllVn 510 (937)
...|.|+. ..+.+--..+|.+||+++.||+ .|.-|+.-+=||.- |.|-+|..-|+..+ +| .+|+++.
T Consensus 628 ~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN-----GaLtigtlDGanvEi~e~vG~~Ngf~FG 701 (824)
T 2gj4_A 628 RLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp GEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CceEEEEecCccchhhhccCCCCEEEeC
Confidence 23577754 4566667789999999999999 99999999999985 66677766676533 34 5799998
Q ss_pred CCCHHHHHHHH
Q 002314 511 PWNITEVANAI 521 (937)
Q Consensus 511 P~D~~~lA~aI 521 (937)
.. .+++ .++
T Consensus 702 ~~-~~ev-~~l 710 (824)
T 2gj4_A 702 MR-VEDV-DRL 710 (824)
T ss_dssp CC-HHHH-HHH
T ss_pred Cc-HHHH-HHH
Confidence 76 6666 444
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.7e-06 Score=83.90 Aligned_cols=54 Identities=19% Similarity=0.199 Sum_probs=40.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCh
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 650 (937)
.|++|||+||||+.....- ... .....+.|.+.++|++|.+ .|..++|+|+++.
T Consensus 1 ~k~v~~D~DGtL~~~~~~~---~~~--~~~~~~~~g~~~~l~~L~~-~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAF---VKS--PDEWIALPGSLQAIARLTQ-ADWTVVLATNQSG 54 (179)
T ss_dssp CCEEEECSBTTTBCCCTTC---CCS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTT
T ss_pred CCEEEEcCCCccccCCCcc---CCC--HHHceECcCHHHHHHHHHH-CCCEEEEEECCCc
Confidence 4789999999999763210 000 0245678999999999987 5999999999873
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.26 E-value=5.4e-06 Score=83.95 Aligned_cols=46 Identities=13% Similarity=-0.001 Sum_probs=38.9
Q ss_pred CeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHh
Q 002314 757 SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 809 (937)
Q Consensus 757 k~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~ 809 (937)
....++.+.+.+|+.+++.+.+.++ ++++.+++||| +.||.+|+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~vGD-~~~Di~~~~~ 182 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAKG------LIDGEVIAIGD-GYTDYQLYEK 182 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHGG------GCCSEEEEEES-SHHHHHHHHH
T ss_pred CceeccCCCCCCcccHHHHHHHHhC------CCCCCEEEEEC-CHhHHHHHhC
Confidence 3455777888999999999998887 46799999999 9999999853
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=4.4e-06 Score=100.89 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=107.7
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHhHH--hCcCcc-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~-~l~Af~~ll~--~~P~~~-~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
+..+++.|.|+..-||... ++..+.++++ .+|+.. ..+++|..|.+..++ .....+-+.+.+++.-||..=...+
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~~ 603 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5678889999999999999 8999888865 455421 247787776554333 2234555667778777775211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc----C-CceEEEC
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l----g-~~gllVn 510 (937)
...|.|+ ...+.+--..+|.+||+++.||+ .|.-|+.-+=||.- |.|-+|..-|+..++ | .+|+++.
T Consensus 604 ~lKVvfl-~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 677 (796)
T 1l5w_A 604 KLKVVFL-PDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEEC-SSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEE-CCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeeecCcCCeeeehhhccCCCcEEEec
Confidence 2357764 45577777789999999999999 99999999999985 666778888877654 5 5899998
Q ss_pred CCCHHHHH
Q 002314 511 PWNITEVA 518 (937)
Q Consensus 511 P~D~~~lA 518 (937)
. +.+++.
T Consensus 678 ~-~~~ev~ 684 (796)
T 1l5w_A 678 H-TVEQVK 684 (796)
T ss_dssp C-CHHHHH
T ss_pred C-CHHHHH
Confidence 7 777766
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.25 E-value=4.9e-06 Score=85.32 Aligned_cols=39 Identities=21% Similarity=-0.040 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-+|+.+++.++++++ ++++.+++||| +.||.+|++.++-
T Consensus 99 k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~nDi~~~~~ag~ 137 (195)
T 3n07_A 99 DDKVQAYYDICQKLA------IAPEQTGYIGD-DLIDWPVMEKVAL 137 (195)
T ss_dssp SSHHHHHHHHHHHHC------CCGGGEEEEES-SGGGHHHHTTSSE
T ss_pred CCcHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHCCC
Confidence 479999999999998 57899999999 9999999999875
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.25 E-value=7.5e-06 Score=84.39 Aligned_cols=40 Identities=15% Similarity=-0.053 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCc-eEEEEecCCCCcHHHHHhcC
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAID-YVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d-~vl~iGD~d~nDEdMf~~~~ 811 (937)
.+-.|+.+++.++++++ ++++ .+++||| +.||..|.+.++
T Consensus 157 ~~Kp~~~~~~~~~~~lg------i~~~~~~v~vGD-~~~Di~~a~~aG 197 (231)
T 3kzx_A 157 TIKPSPEPVLAALTNIN------IEPSKEVFFIGD-SISDIQSAIEAG 197 (231)
T ss_dssp CCTTSSHHHHHHHHHHT------CCCSTTEEEEES-SHHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHHcC------CCcccCEEEEcC-CHHHHHHHHHCC
Confidence 35567899999999998 5677 8999999 999999999875
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.22 E-value=3.3e-06 Score=87.68 Aligned_cols=38 Identities=26% Similarity=0.114 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
.+|+.+++.++++++ ++++.+++||| +.||.+|++.++
T Consensus 123 k~K~~~l~~~~~~lg------~~~~~~~~vGD-s~nDi~~~~~ag 160 (211)
T 3ij5_A 123 SDKLVAYHELLATLQ------CQPEQVAYIGD-DLIDWPVMAQVG 160 (211)
T ss_dssp SSHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHTTSS
T ss_pred CChHHHHHHHHHHcC------cCcceEEEEcC-CHHHHHHHHHCC
Confidence 479999999999998 57899999999 999999998774
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.22 E-value=3.5e-06 Score=89.84 Aligned_cols=65 Identities=8% Similarity=0.116 Sum_probs=48.6
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc---cCc-----e
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE---YNL-----W 663 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~---~~l-----~ 663 (937)
++|+||+||||++.. ..+ +.+.++|++|.+ .|..|+++|||+......+... +++ .
T Consensus 2 k~i~~D~DGtL~~~~--------------~~~-~~~~~~l~~l~~-~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~ 65 (263)
T 1zjj_A 2 VAIIFDMDGVLYRGN--------------RAI-PGVRELIEFLKE-RGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSI 65 (263)
T ss_dssp EEEEEECBTTTEETT--------------EEC-TTHHHHHHHHHH-HTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGG
T ss_pred eEEEEeCcCceEeCC--------------EeC-ccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 789999999999752 223 689999999987 5999999999987555544433 333 5
Q ss_pred EEeeCceEE
Q 002314 664 LAAENGMFL 672 (937)
Q Consensus 664 liaenG~~i 672 (937)
+++.||+..
T Consensus 66 i~~~~~~~~ 74 (263)
T 1zjj_A 66 IITSGLATR 74 (263)
T ss_dssp EEEHHHHHH
T ss_pred EEecHHHHH
Confidence 777777754
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=5.5e-06 Score=93.00 Aligned_cols=155 Identities=11% Similarity=0.036 Sum_probs=100.5
Q ss_pred CcEEEEEecccccCCH-HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 002314 363 RKVMLGVDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (937)
Q Consensus 363 ~~iIL~VdRld~~KGi-~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (937)
+.+++++|++...|+. ..+++++... ++.|+++ ++.++.+ .+...+ . .+ . ..|
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l----~----~~------~--~~v 272 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALL----T----DL------P--DNA 272 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGC----T----TC------C--TTE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhc----c----cC------C--CCE
Confidence 4567788999876665 8888888877 7777654 5545422 111111 1 00 0 135
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC----CCccccc--CCceEEECC----
Q 002314 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNP---- 511 (937)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~----aG~~~~l--g~~gllVnP---- 511 (937)
+ +.++++..+ ++..||++|. .|-..+.+|||+|+ .|+|+.-. .+.++.+ +..|+++++
T Consensus 273 ~-~~~~~~~~~---ll~~ad~~v~----~~G~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~ 340 (391)
T 3tsa_A 273 R-IAESVPLNL---FLRTCELVIC----AGGSGTAFTATRLG----IPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQ 340 (391)
T ss_dssp E-ECCSCCGGG---TGGGCSEEEE----CCCHHHHHHHHHTT----CCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHH
T ss_pred E-EeccCCHHH---HHhhCCEEEe----CCCHHHHHHHHHhC----CCEEecCCcccHHHHHHHHHHcCCEEecCccccc
Confidence 5 467787665 4499999995 34456789999994 67777433 2333334 347899998
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHH
Q 002314 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (937)
Q Consensus 512 ~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl 556 (937)
.|.++++++|.++|+++. .|+++.+...+......+...++.+.
T Consensus 341 ~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 384 (391)
T 3tsa_A 341 SDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTLE 384 (391)
T ss_dssp TCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 899999999999999763 34444444455666677766666443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.18 E-value=6e-06 Score=82.68 Aligned_cols=38 Identities=21% Similarity=0.128 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+|+.+++.++++++ ++++++++||| +.||.+|++.++-
T Consensus 83 ~K~~~l~~~~~~~g------i~~~~~~~vGD-~~nDi~~~~~ag~ 120 (168)
T 3ewi_A 83 DKLATVDEWRKEMG------LCWKEVAYLGN-EVSDEECLKRVGL 120 (168)
T ss_dssp CHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHHHSSE
T ss_pred ChHHHHHHHHHHcC------cChHHEEEEeC-CHhHHHHHHHCCC
Confidence 69999999999998 57899999999 9999999999976
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.8e-05 Score=89.16 Aligned_cols=102 Identities=15% Similarity=0.038 Sum_probs=66.0
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC----CCccccc--CCceEEECCC-
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNPW- 512 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~----aG~~~~l--g~~gllVnP~- 512 (937)
.|++ .++++ ...++..||+||. .|-+.+..|||+|+ .|+|+.-. .+.++.+ ...|+++++.
T Consensus 285 ~v~~-~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~ 352 (398)
T 4fzr_A 285 GVLA-AGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEG----VPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQ 352 (398)
T ss_dssp TEEE-ESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHTTSEEECC---
T ss_pred cEEE-eCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCccc
Confidence 3554 56776 4567778999994 44467889999994 67777433 3444444 3468999887
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHH
Q 002314 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAET 554 (937)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~ 554 (937)
|.++++++|.++|+++. .|.++.+...++...+.+...++.
T Consensus 353 ~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 394 (398)
T 4fzr_A 353 AGVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVRL 394 (398)
T ss_dssp ----CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHHH
Confidence 78899999999999763 444444455566666776665553
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.15 E-value=1.2e-05 Score=81.24 Aligned_cols=71 Identities=13% Similarity=0.128 Sum_probs=48.6
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccc-----------cccccCCChhHHHHHHHhhcCCCCeEEEEcCCC-hhhHHHH
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQI-----------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKN 656 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~-----------~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~ 656 (937)
...++|+||+||||.+..... ..+... ......+.|.+.++|++|.+ .|..++|+||++ ...++.+
T Consensus 25 ~~~k~vifDlDGTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~G~~v~ivT~~~~~~~~~~~ 102 (187)
T 2wm8_A 25 RLPKLAVFDLDYTLWPFWVDT-HVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQS-LGVPGAAASRTSEIEGANQL 102 (187)
T ss_dssp TSCSEEEECSBTTTBSSCTTT-SSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHH-HTCCEEEEECCSCHHHHHHH
T ss_pred hccCEEEEcCCCCcchHHHhh-ccCcchhhhcccchhhccCcccCcchhHHHHHHHHHH-CCceEEEEeCCCChHHHHHH
Confidence 456899999999998542100 000000 01235678899999999987 589999999998 6777776
Q ss_pred hcccC
Q 002314 657 FQEYN 661 (937)
Q Consensus 657 ~~~~~ 661 (937)
+..++
T Consensus 103 l~~~g 107 (187)
T 2wm8_A 103 LELFD 107 (187)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 66543
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.15 E-value=4.7e-05 Score=92.03 Aligned_cols=151 Identities=13% Similarity=0.165 Sum_probs=108.1
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHhHH--hCcCcc-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~-~l~Af~~ll~--~~P~~~-~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
+..+++.|.|+..-||... ++..+.++++ .+|+.. ..+++|..|....++ .....+-+.+.+++.-||..=...+
T Consensus 515 d~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 515 ESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp TSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred CCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5678889999999999999 8999998875 565421 147787776554333 2234555667778877775211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc----C-CceEEEC
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l----g-~~gllVn 510 (937)
...|.|+. ..+.+--..+|.+||+++.||+ .|.-|+.-+=||.- |.|-+|..-|+..++ | .+|+++.
T Consensus 594 ~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 594 LLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN-----GALTLGTMDGANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp TEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT-----TCEEEEESSTHHHHHHHHHCGGGSEEES
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeEEeccCCeEeehhhhcCCCcEEEec
Confidence 23577754 4566777789999999999999 99999999999986 666668777877554 5 5899997
Q ss_pred C--CCHHHHHH
Q 002314 511 P--WNITEVAN 519 (937)
Q Consensus 511 P--~D~~~lA~ 519 (937)
. .++.++-.
T Consensus 668 ~~~~ev~~l~~ 678 (796)
T 2c4m_A 668 ARVEELPALRE 678 (796)
T ss_dssp CCTTTHHHHHH
T ss_pred CchhhHHHHHH
Confidence 7 66655543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.10 E-value=4.1e-06 Score=86.21 Aligned_cols=40 Identities=10% Similarity=-0.086 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 766 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
+-.|+.+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 154 ~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~a~~aG~ 194 (234)
T 3u26_A 154 FKPHPRIFELALKKAG------VKGEEAVYVGD-NPVKDCGGSKNLGM 194 (234)
T ss_dssp CTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHHHHTTTC
T ss_pred CCcCHHHHHHHHHHcC------CCchhEEEEcC-CcHHHHHHHHHcCC
Confidence 4456888999999998 57899999999 97 99999999863
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.07 E-value=5.3e-06 Score=85.79 Aligned_cols=43 Identities=9% Similarity=-0.045 Sum_probs=38.2
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+.+..|+.+++.++++++ ++++++++||| +.||..|.+.++-
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~a~~aG~ 198 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGLG------IPPERCVVIGD-GVPDAEMGRAAGM 198 (237)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCCC
Confidence 3567789999999999998 57899999999 9999999999864
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.06 E-value=5.5e-06 Score=84.88 Aligned_cols=43 Identities=16% Similarity=-0.044 Sum_probs=38.3
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+.+..|+.+++.++++++ ++++.+++||| +.||..|++.++-
T Consensus 138 ~~~~kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~a~~aG~ 180 (226)
T 3mc1_A 138 DGKLSTKEDVIRYAMESLN------IKSDDAIMIGD-REYDVIGALKNNL 180 (226)
T ss_dssp TSSSCSHHHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHTTTC
T ss_pred CCCCCCCHHHHHHHHHHhC------cCcccEEEECC-CHHHHHHHHHCCC
Confidence 3567889999999999998 56889999999 9999999999864
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=6.7e-06 Score=84.91 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=41.6
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChh
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 651 (937)
+.++++||+||||+....-. .. .....+.|.+.++|++|.+ .|..++|+|+++..
T Consensus 24 ~~k~v~~D~DGTL~~~~~~~----~~--~~~~~~~pg~~e~L~~L~~-~G~~~~ivTn~~~~ 78 (211)
T 2gmw_A 24 SVPAIFLDRDGTINVDHGYV----HE--IDNFEFIDGVIDAMRELKK-MGFALVVVTNQSGI 78 (211)
T ss_dssp CBCEEEECSBTTTBCCCSSC----CS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTHH
T ss_pred cCCEEEEcCCCCeECCCCcc----cC--cccCcCCcCHHHHHHHHHH-CCCeEEEEECcCCc
Confidence 45799999999999753111 00 1234677899999999987 59999999999864
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.02 E-value=6e-07 Score=92.40 Aligned_cols=41 Identities=12% Similarity=0.006 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
.+-.|+.+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 153 ~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~a~~aG~ 194 (230)
T 3vay_A 153 IGKPDPAPFLEALRRAK------VDASAAVHVGD-HPSDDIAGAQQAGM 194 (230)
T ss_dssp CCTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred CCCcCHHHHHHHHHHhC------CCchheEEEeC-ChHHHHHHHHHCCC
Confidence 34567899999999998 57899999999 97 99999999864
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.92 E-value=1e-05 Score=76.89 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=40.5
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 652 (937)
|+|++|+||||++....+ . ....+++.+.++|++|.+ .|..++|+|||+...
T Consensus 2 k~i~~DlDGTL~~~~~~~------~--~~~~~~~~~~~~l~~l~~-~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSD------Y--RNVLPRLDVIEQLREYHQ-LGFEIVISTARNMRT 53 (126)
T ss_dssp CEEEECSTTTTBCCCCSC------G--GGCCBCHHHHHHHHHHHH-TTCEEEEEECTTTTT
T ss_pred CEEEEecCCCCCCCCCCc------c--ccCCCCHHHHHHHHHHHh-CCCeEEEEeCCChhh
Confidence 789999999999863211 0 012577899999999987 599999999998743
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.2e-06 Score=90.24 Aligned_cols=40 Identities=13% Similarity=0.067 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+..+++.++++++. .++++.+++||| +.||..|.+.++-
T Consensus 152 ~~~~~~~~~~~~lg~----~~~~~~~i~iGD-~~~Di~~a~~aG~ 191 (234)
T 2hcf_A 152 LPHIALERARRMTGA----NYSPSQIVIIGD-TEHDIRCARELDA 191 (234)
T ss_dssp HHHHHHHHHHHHHCC----CCCGGGEEEEES-SHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHhCC----CCCcccEEEECC-CHHHHHHHHHCCC
Confidence 356778889999871 025799999999 9999999998863
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=2.1e-05 Score=84.16 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCC-ceEEEEecCCCCcHHHHHhcCc
Q 002314 766 GVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 766 gvnKG~Av~~Ll~~l~~~~~~~~~~-d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+-.|+.+++.++++++ +++ +.+++||| +.||..|.+.++-
T Consensus 203 ~Kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~a~~aG~ 243 (282)
T 3nuq_A 203 CKPHVKAFEKAMKESG------LARYENAYFIDD-SGKNIETGIKLGM 243 (282)
T ss_dssp CTTSHHHHHHHHHHHT------CCCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHcC------CCCcccEEEEcC-CHHHHHHHHHCCC
Confidence 4468999999999998 566 99999999 9999999999864
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.89 E-value=3e-05 Score=78.92 Aligned_cols=42 Identities=12% Similarity=0.127 Sum_probs=38.0
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+.+..|+.+++.++++++ ++++.+++||| +.||.+|++.++-
T Consensus 138 ~~~k~k~~~~~~~~~~~g------~~~~~~i~vGD-s~~Di~~a~~aG~ 179 (217)
T 3m1y_A 138 MFSHSKGEMLLVLQRLLN------ISKTNTLVVGD-GANDLSMFKHAHI 179 (217)
T ss_dssp CSTTHHHHHHHHHHHHHT------CCSTTEEEEEC-SGGGHHHHTTCSE
T ss_pred CCCCChHHHHHHHHHHcC------CCHhHEEEEeC-CHHHHHHHHHCCC
Confidence 467899999999999998 57899999999 9999999999875
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.88 E-value=3.7e-05 Score=81.46 Aligned_cols=53 Identities=9% Similarity=0.112 Sum_probs=41.9
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
..++|+||+||||++.. ..+ +.+.++|+.|.+ .|..++++|||+......++.
T Consensus 4 ~~k~v~fDlDGTL~~~~--------------~~~-~~~~~~l~~l~~-~g~~~~~~t~~~~~~~~~~~~ 56 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLGK--------------EPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQ 56 (264)
T ss_dssp SCCEEEECCBTTTEETT--------------EEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHH
T ss_pred cCCEEEEeCCCeEEeCC--------------EEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHH
Confidence 46899999999999852 223 688899999987 599999999998766655544
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00019 Score=85.09 Aligned_cols=171 Identities=9% Similarity=-0.057 Sum_probs=105.6
Q ss_pred cEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 002314 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (937)
Q Consensus 364 ~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (937)
.++.+..|+ .|..+..++++.+++++.|+. +.++.+.+.. .+... .+.+++.+. .|. ..|.|
T Consensus 442 v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~~--~g~~~-~~~~~~~~~--GI~--------~Rv~F 503 (631)
T 3q3e_A 442 VNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQS--NGITH-PYVERFIKS--YLG--------DSATA 503 (631)
T ss_dssp EEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESSC--CGGGH-HHHHHHHHH--HHG--------GGEEE
T ss_pred EEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCCC--chhhH-HHHHHHHHc--CCC--------ccEEE
Confidence 455567774 699999999999999999974 2222222211 22221 222232221 122 13554
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--------CCceEEECCCCHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--------GAGAILVNPWNIT 515 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--------g~~gllVnP~D~~ 515 (937)
.+.++.++..++|+.|||||.|+.+.| |++++|||+|+ .|+|.....+.+.-+ |-..++|- .|.+
T Consensus 504 -~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmG----VPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-~d~e 576 (631)
T 3q3e_A 504 -HPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLG----LVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-NTVD 576 (631)
T ss_dssp -ECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTT----CCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-SSHH
T ss_pred -cCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcC----CCEEeccCCcHHHHhHHHHHHhcCCCcceec-CCHH
Confidence 688999999999999999999998877 99999999993 455543333322222 33332232 3789
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhhhhhhhc---CCHHHHHHHHHHHHHHh
Q 002314 516 EVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDT 562 (937)
Q Consensus 516 ~lA~aI~~aL~m~~~er~~r~~~~~~~V~~---~~~~~W~~~fl~~l~~~ 562 (937)
+.++...++.+++ +.+.+..+++++.+.+ ++ .|.+.|-+.++.+
T Consensus 577 eYv~~Av~La~D~-~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~ 623 (631)
T 3q3e_A 577 EYVERAVRLAENH-QERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEK 623 (631)
T ss_dssp HHHHHHHHHHHCH-HHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHH
T ss_pred HHHHHHHHHhCCH-HHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHH
Confidence 9999888888876 4555555555544322 22 4555555444443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00012 Score=76.70 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
.++.+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 163 p~~~~~~~~~~~l~------~~~~~~i~iGD-~~~~Di~~a~~aG~ 201 (251)
T 2pke_A 163 KDPQTYARVLSEFD------LPAERFVMIGN-SLRSDVEPVLAIGG 201 (251)
T ss_dssp CSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHHHHHTTC
T ss_pred CCHHHHHHHHHHhC------cCchhEEEECC-CchhhHHHHHHCCC
Confidence 46899999999998 57899999999 98 99999999874
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00015 Score=73.26 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=45.3
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCh---hhHHHHhccc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKNFQEY 660 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~~~~~~~ 660 (937)
..++|+||+||||+.....--.......-....+-|.+.++|++|.+ .|..++|+|+.+. ..+...+..+
T Consensus 2 ~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~l~~~ 74 (189)
T 3ib6_A 2 SLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQ-LGFKQAILSNTATSDTEVIKRVLTNF 74 (189)
T ss_dssp -CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHH-TTCEEEEEECCSSCCHHHHHHHHHHT
T ss_pred CceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHH-CCCEEEEEECCCccchHHHHHHHHhc
Confidence 36799999999998742200000000000235678999999999987 5899999999865 5555555443
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.86 E-value=1.4e-05 Score=81.69 Aligned_cols=38 Identities=16% Similarity=0.061 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
.|+.+++.++++++ ++++++++||| +. ||..|.+.++-
T Consensus 158 pk~~~~~~~~~~lg------i~~~~~i~iGD-~~~~Di~~a~~aG~ 196 (234)
T 3ddh_A 158 KTEKEYLRLLSILQ------IAPSELLMVGN-SFKSDIQPVLSLGG 196 (234)
T ss_dssp CSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHHHHHHTC
T ss_pred CCHHHHHHHHHHhC------CCcceEEEECC-CcHHHhHHHHHCCC
Confidence 69999999999998 57899999999 96 99999999974
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.84 E-value=9.9e-06 Score=83.83 Aligned_cols=55 Identities=18% Similarity=0.286 Sum_probs=41.6
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChh
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 651 (937)
..+++++|+||||+....-. .. .....+.+.+.++|++|.+ .|..++|+|+++..
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~----~~--~~~~~~~~g~~e~L~~L~~-~G~~~~i~Tn~~~~ 84 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYP----SD--PAEIVLRPQMLPAIATANR-AGIPVVVVTNQSGI 84 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCT----TC--GGGCCBCGGGHHHHHHHHH-HTCCEEEEEECHHH
T ss_pred cCCEEEEeCCCCcCCCCccc----CC--cccCeECcCHHHHHHHHHH-CCCEEEEEcCcCCC
Confidence 46889999999999752111 00 1245678899999999987 59999999999764
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00055 Score=76.66 Aligned_cols=149 Identities=13% Similarity=0.036 Sum_probs=85.8
Q ss_pred cEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 002314 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (937)
Q Consensus 364 ~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (937)
.+++..|++...+.-..+++|++.+.... ++.++.+++. . .++.+.+. ....+. ++.+
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~-----~~~vi~~~G~--~---~~~~~~~~----~~~~~~--------~~~v 239 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEI-----RPAIRHQAGR--Q---HAEITAER----YRTVAV--------EADV 239 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTT-----CCEEEEECCT--T---THHHHHHH----HHHTTC--------CCEE
T ss_pred EEEEECCcCCccccchhhHHHHHhccccc-----ceEEEEecCc--c---ccccccce----eccccc--------cccc
Confidence 34455678777666666667766553221 2334434322 1 22233322 222221 1222
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc--------ccc-C-CceEEECCC-
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--------QSL-G-AGAILVNPW- 512 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~--------~~l-g-~~gllVnP~- 512 (937)
.+++ +++..+|+.||++|.-+ | +.++.|+++|+ .|.|+.-+.++. +.+ . ..|++++..
T Consensus 240 -~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G----~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 240 -APFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAG----LPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp -ESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHT----CCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred -ccch--hhhhhhhccceEEEecC---C-cchHHHHHHhC----CCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 2444 46889999999999644 5 57888999994 677776655442 223 1 247788755
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcC
Q 002314 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (937)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~ 546 (937)
+.+.++++|.++|++++ .++++.+++++....+
T Consensus 309 ~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~~~~ 342 (365)
T 3s2u_A 309 TGAAELAAQLSEVLMHPE-TLRSMADQARSLAKPE 342 (365)
T ss_dssp CCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTCCTT
T ss_pred CCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcCCcc
Confidence 58899999999999873 4555555655554443
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=6.2e-05 Score=78.14 Aligned_cols=38 Identities=8% Similarity=-0.146 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|..+++.++++++ ++++.+++||| +.+|..|.+.++-
T Consensus 162 p~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~ 199 (240)
T 2no4_A 162 PDPRIYQFACDRLG------VNPNEVCFVSS-NAWDLGGAGKFGF 199 (240)
T ss_dssp TSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHHHHHCCC
Confidence 57788899999998 57899999999 9999999999864
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.73 E-value=7.4e-07 Score=90.82 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=36.6
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+..|+.+++.++++++ ++++.+++||| +.||.+|++.++-
T Consensus 142 ~~~k~~~~~~~~~~~~~~------~~~~~~i~iGD-~~nDi~~~~~aG~ 183 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRLK------ACPEEVLYIGD-STVDAGTAAAAGV 183 (225)
T ss_dssp SSCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCChHHHHHHHHHhC------CChHHeEEEcC-CHHHHHHHHHCCC
Confidence 345577899999999998 57899999999 9999999999864
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00023 Score=75.41 Aligned_cols=32 Identities=13% Similarity=0.141 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+|+.+++.+.+.+ .+++||| +.||.+|++.++
T Consensus 194 ~k~~~~k~~~~~~-----------~~~~vGD-~~nDi~~~~~Ag 225 (280)
T 3skx_A 194 EKAEKVKEVQQKY-----------VTAMVGD-GVNDAPALAQAD 225 (280)
T ss_dssp GHHHHHHHHHTTS-----------CEEEEEC-TTTTHHHHHHSS
T ss_pred HHHHHHHHHHhcC-----------CEEEEeC-CchhHHHHHhCC
Confidence 4888877765432 4699999 999999999874
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00062 Score=70.04 Aligned_cols=39 Identities=10% Similarity=-0.024 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHHhc---ccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIV---HSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~---~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..|..+++.+++.++ . +++.+++||| +.||.+|++.++.
T Consensus 158 ~~K~~~~~~~~~~~~~~~~------~~~~~~~vGD-s~~D~~~~~~ag~ 199 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALG------DFAESYFYSD-SVNDVPLLEAVTR 199 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGG------GSSEEEEEEC-CGGGHHHHHHSSE
T ss_pred hHHHHHHHHHHHHcCCCcC------chhheEEEeC-CHhhHHHHHhCCC
Confidence 357777777777765 4 4789999999 9999999999975
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.51 E-value=9.9e-05 Score=74.88 Aligned_cols=38 Identities=3% Similarity=-0.246 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|+.+++.++++++ ++++.+++||| +.||.+|++.++-
T Consensus 151 p~~~~~~~~~~~~~------i~~~~~i~iGD-~~nDi~~a~~aG~ 188 (226)
T 1te2_A 151 PHPQVYLDCAAKLG------VDPLTCVALED-SVNGMIASKAARM 188 (226)
T ss_dssp TSTHHHHHHHHHHT------SCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHHHHHcCC
Confidence 44999999999998 57899999999 9999999999975
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00066 Score=71.14 Aligned_cols=40 Identities=13% Similarity=-0.087 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 766 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+-.|..+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 146 ~Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~aG~ 185 (253)
T 1qq5_A 146 FKPHPDSYALVEEVLG------VTPAEVLFVSS-NGFDVGGAKNFGF 185 (253)
T ss_dssp CTTSHHHHHHHHHHHC------CCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHcC------CCHHHEEEEeC-ChhhHHHHHHCCC
Confidence 4467889999999998 57899999999 9999999999864
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00034 Score=79.47 Aligned_cols=104 Identities=13% Similarity=-0.035 Sum_probs=71.0
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECCC-
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW- 512 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~- 512 (937)
.|.+ .+++++. .+|+.||+||..+ |. .+.+|||+|+ .|+|+....| .++.+ ...|+++++.
T Consensus 284 ~v~~-~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~ 351 (430)
T 2iyf_A 284 NVEV-HDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATA----TPMIAVPQAVDQFGNADMLQGLGVARKLATEE 351 (430)
T ss_dssp TEEE-ESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-
T ss_pred CeEE-EecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhC----CCEEECCCccchHHHHHHHHHcCCEEEcCCCC
Confidence 3554 5788765 6899999998865 43 6899999994 6888876654 23333 3468899887
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHH
Q 002314 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (937)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl 556 (937)
|.++++++|.++|+++ +.++++.+...+....+++...++.+.
T Consensus 352 ~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 352 ATADLLRETALALVDDP-EVARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp CCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 8899999999999854 344444444444455555555555443
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00036 Score=68.85 Aligned_cols=124 Identities=13% Similarity=0.079 Sum_probs=82.3
Q ss_pred CCcEEEEEeccc---ccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCc
Q 002314 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (937)
Q Consensus 362 ~~~iIL~VdRld---~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~ 438 (937)
...+++++|++. +.|++..+++|+..+ + + .++.++.+.. .+ .+.
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~~~~~g~~~---~~-------------~~~-------- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-Q----KVLWRFDGNK---PD-------------TLG-------- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-S----EEEEECCSSC---CT-------------TCC--------
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-C----eEEEEECCcC---cc-------------cCC--------
Confidence 356788999985 778888888887542 2 2 2333432211 00 010
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECCC
Q 002314 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW 512 (937)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~ 512 (937)
..|++ .+++++.++.++ ..||++|.. .| +.+..|+|+|+ .|+|+....+ .++.+ ...|+++++.
T Consensus 68 ~~v~~-~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G----~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~ 137 (170)
T 2o6l_A 68 LNTRL-YKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHG----IPMVGIPLFADQPDNIAHMKARGAAVRVDFN 137 (170)
T ss_dssp TTEEE-ESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHTTTSEEECCTT
T ss_pred CcEEE-ecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcC----CCEEeccchhhHHHHHHHHHHcCCeEEeccc
Confidence 13554 688888776654 999999964 33 48899999994 6777776542 23333 2468888876
Q ss_pred --CHHHHHHHHHHHHcCC
Q 002314 513 --NITEVANAIARALNMS 528 (937)
Q Consensus 513 --D~~~lA~aI~~aL~m~ 528 (937)
+.++++++|.++|+++
T Consensus 138 ~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP 155 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHcCH
Confidence 8899999999999864
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.40 E-value=2.5e-05 Score=79.28 Aligned_cols=38 Identities=3% Similarity=-0.204 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|+.+++.++++++ ++++++++||| +.||.+|++.++-
T Consensus 146 p~~~~~~~~~~~lg------i~~~~~i~iGD-~~nDi~~a~~aG~ 183 (221)
T 2wf7_A 146 PAPDIFIAAAHAVG------VAPSESIGLED-SQAGIQAIKDSGA 183 (221)
T ss_dssp TSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CChHHHHHHHHHcC------CChhHeEEEeC-CHHHHHHHHHCCC
Confidence 45569999999998 57899999999 9999999999975
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00023 Score=73.07 Aligned_cols=41 Identities=10% Similarity=-0.015 Sum_probs=35.3
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+-.|..+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 149 ~~Kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~ 189 (232)
T 1zrn_A 149 VYKPDNRVYELAEQALG------LDRSAILFVAS-NAWDATGARYFGF 189 (232)
T ss_dssp CCTTSHHHHHHHHHHHT------SCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHHHHHcCC
Confidence 34567889999999998 56899999999 9999999999864
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0014 Score=70.69 Aligned_cols=71 Identities=14% Similarity=0.179 Sum_probs=54.7
Q ss_pred hHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
+......|.....+++++|+|+++..... ....+.|.+.++|+.|.+ .|..++|+||++...++..+.
T Consensus 131 ~~~~~~~~~~~g~~~i~~~~d~~~~~~~~-----------~~~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~ 198 (287)
T 3a1c_A 131 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISR 198 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEE-----------eccccchhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHH
Confidence 34456667777789999999999875321 134577899999999987 589999999999988877776
Q ss_pred ccC
Q 002314 659 EYN 661 (937)
Q Consensus 659 ~~~ 661 (937)
.++
T Consensus 199 ~~g 201 (287)
T 3a1c_A 199 ELN 201 (287)
T ss_dssp HHT
T ss_pred HhC
Confidence 644
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00069 Score=69.01 Aligned_cols=42 Identities=17% Similarity=-0.036 Sum_probs=37.2
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+-.|...+..++++++ ++++++++||| +.+|..|.+.++-
T Consensus 134 ~~~Kp~p~~~~~~~~~lg------~~p~~~~~vgD-s~~Di~~a~~aG~ 175 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTHQ------LAPEQAIIIGD-TKFDMLGARETGI 175 (210)
T ss_dssp SSCCSHHHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCChHHHHHHHHHcC------CCcccEEEECC-CHHHHHHHHHCCC
Confidence 556789999999999998 57899999999 9999999998864
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0027 Score=70.83 Aligned_cols=136 Identities=10% Similarity=0.030 Sum_probs=84.2
Q ss_pred CcEEEEEeccccc-------CCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCC
Q 002314 363 RKVMLGVDRLDMI-------KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (937)
Q Consensus 363 ~~iIL~VdRld~~-------KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~ 435 (937)
..+++++|++... +.+..+++|++.+ ++ .++.+++ .++. ++++. +..
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~----~~~~~~g-----~~~~----~~l~~----~~~---- 264 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DV----ELIVAAP-----DTVA----EALRA----EVP---- 264 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TC----EEEEECC-----HHHH----HHHHH----HCT----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----Cc----EEEEEeC-----CCCH----HhhCC----CCC----
Confidence 4578899999875 6677788887642 22 2443321 1222 12221 111
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEE
Q 002314 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILV 509 (937)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllV 509 (937)
.|. + ++++.. .+|..||+||..+ | ..+..|||+|+ .|+|+....+ .++.+ ...|+++
T Consensus 265 ----~v~-~-~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~v~~p~~~dq~~~a~~~~~~g~g~~~ 327 (384)
T 2p6p_A 265 ----QAR-V-GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAG----VPQLLIPKGSVLEAPARRVADYGAAIAL 327 (384)
T ss_dssp ----TSE-E-ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEEC
T ss_pred ----ceE-E-cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhC----CCEEEccCcccchHHHHHHHHCCCeEec
Confidence 244 4 677754 4679999999863 4 45789999994 6777776533 33333 2358888
Q ss_pred CCC--CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh
Q 002314 510 NPW--NITEVANAIARALNMSPEEREKRHWHNFTHV 543 (937)
Q Consensus 510 nP~--D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V 543 (937)
++. +.++++++|.++|+++ +.++++.+..+.+
T Consensus 328 ~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~ 361 (384)
T 2p6p_A 328 LPGEDSTEAIADSCQELQAKD--TYARRAQDLSREI 361 (384)
T ss_dssp CTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHH
Confidence 875 7899999999999864 3333444443333
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0011 Score=67.83 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHH
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 808 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~ 808 (937)
.|..+++.++++++ . +.+++||| +.+|..|.+
T Consensus 157 ~Kp~~~~~~~~~~~------~--~~~~~vGD-s~~Di~~a~ 188 (225)
T 1nnl_A 157 GKGKVIKLLKEKFH------F--KKIIMIGD-GATDMEACP 188 (225)
T ss_dssp HHHHHHHHHHHHHC------C--SCEEEEES-SHHHHTTTT
T ss_pred chHHHHHHHHHHcC------C--CcEEEEeC-cHHhHHHHH
Confidence 58888999999887 2 67999999 988876643
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00018 Score=76.93 Aligned_cols=74 Identities=16% Similarity=0.163 Sum_probs=48.1
Q ss_pred hcCCeEEEEecCcccCCCCC-----------CCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC---hhhH
Q 002314 588 RSNNRLLILGFNATLTEPVD-----------TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVL 653 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~-----------~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~---~~~L 653 (937)
..+.++|+||+||||++..+ -+.............+.|.+.++|+.|.+ .|..++|+|||+ ...+
T Consensus 56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~Gi~i~iaTnr~~~~~~~~ 134 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTES-KGVDIYYISNRKTNQLDAT 134 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHH-TTCEEEEEEEEEGGGHHHH
T ss_pred CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCEEEEEcCCchhHHHHH
Confidence 34678999999999998620 00000000000114577899999999987 599999999999 4455
Q ss_pred HHHhcccCc
Q 002314 654 DKNFQEYNL 662 (937)
Q Consensus 654 ~~~~~~~~l 662 (937)
...+..+++
T Consensus 135 ~~~L~~~Gl 143 (258)
T 2i33_A 135 IKNLERVGA 143 (258)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 555555443
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.12 E-value=3.4e-05 Score=82.49 Aligned_cols=42 Identities=5% Similarity=-0.202 Sum_probs=37.4
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCC-------CCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKT-------AIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~-------~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+.+..|+.+++.++++++ + +++.+++||| +.||.+|++.++-
T Consensus 167 ~~~kp~~~~~~~~~~~lg------i~~~~~~~~~~~~i~~GD-s~nDi~~a~~AG~ 215 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGLG------FPINEQDPSKSKVVVFED-APAGIAAGKAAGC 215 (275)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCCCSSCGGGSCEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCChHHHHHHHHHcC------CCccccCCCcceEEEEeC-CHHHHHHHHHcCC
Confidence 456679999999999998 5 6899999999 9999999999974
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0093 Score=66.41 Aligned_cols=105 Identities=14% Similarity=0.083 Sum_probs=67.7
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC-C----Cccccc--CCceEEECCC
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-A----GAAQSL--GAGAILVNPW 512 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~-a----G~~~~l--g~~gllVnP~ 512 (937)
.|++ .+++++. .++..||++|..+ |. .+.+|+++++ .|+|+.-. . +.++.+ ...|+.+++.
T Consensus 282 ~v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G----~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~ 349 (402)
T 3ia7_A 282 NVEA-HQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAG----VPLVLVPHFATEAAPSAERVIELGLGSVLRPD 349 (402)
T ss_dssp TEEE-ESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTT----CCEEECGGGCGGGHHHHHHHHHTTSEEECCGG
T ss_pred cEEE-ecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhC----CCEEEeCCCcccHHHHHHHHHHcCCEEEccCC
Confidence 3553 5777766 8899999999765 33 5679999994 56665433 2 333333 3467888876
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHhh-hhhhhcCCHHHHHHHHHHH
Q 002314 513 --NITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSE 558 (937)
Q Consensus 513 --D~~~lA~aI~~aL~m~~~er~~r~~~~-~~~V~~~~~~~W~~~fl~~ 558 (937)
|.++++++|.++|+++ +.++++.+. .+....+.+..-++.+.+.
T Consensus 350 ~~~~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 396 (402)
T 3ia7_A 350 QLEPASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEVEAY 396 (402)
T ss_dssp GCSHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHHHHH
Confidence 8999999999999875 333334433 3344445555555544433
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0014 Score=66.15 Aligned_cols=39 Identities=10% Similarity=-0.027 Sum_probs=30.6
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+|....|..+++.+.. +++.+++||| +.+|..|.+.++-
T Consensus 128 ~p~p~~~~~~l~~l~~----------~~~~~~~iGD-~~~Di~~a~~aG~ 166 (206)
T 1rku_A 128 LRQKDPKRQSVIAFKS----------LYYRVIAAGD-SYNDTTMLSEAHA 166 (206)
T ss_dssp CCSSSHHHHHHHHHHH----------TTCEEEEEEC-SSTTHHHHHHSSE
T ss_pred cCCCchHHHHHHHHHh----------cCCEEEEEeC-ChhhHHHHHhcCc
Confidence 4777778888777532 2578999999 9999999998853
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.002 Score=70.81 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=33.9
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|..+++.++++++ ++++.+++||| +.+|..|.+.++-
T Consensus 246 pkp~~~~~~~~~lg------v~~~~~i~VGD-s~~Di~aa~~AG~ 283 (317)
T 4eze_A 246 NKKQTLVDLAARLN------IATENIIACGD-GANDLPMLEHAGT 283 (317)
T ss_dssp HHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred CCHHHHHHHHHHcC------CCcceEEEEeC-CHHHHHHHHHCCC
Confidence 57888999999988 56899999999 9999999999974
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0022 Score=77.32 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=55.1
Q ss_pred hHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
.....+.+.....+.+++.+||+++.... ..-.+.+++.++|++|.+ .|.+++++||++.........
T Consensus 425 ~~~~~~~~~~~g~~~l~va~~~~~~G~i~-----------~~D~l~~~~~~~i~~L~~-~Gi~v~~~TGd~~~~a~~ia~ 492 (645)
T 3j08_A 425 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISR 492 (645)
T ss_dssp HHHHHHHHHTTTCCCEEEEETTEEEEEEE-----------EECCCTTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEE-----------ecCCchhHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHH
Confidence 44455667777788999999999875321 123477899999999987 599999999999888877766
Q ss_pred ccCc
Q 002314 659 EYNL 662 (937)
Q Consensus 659 ~~~l 662 (937)
.+++
T Consensus 493 ~lgi 496 (645)
T 3j08_A 493 ELNL 496 (645)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 6544
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.087 Score=59.01 Aligned_cols=104 Identities=11% Similarity=-0.046 Sum_probs=66.2
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECCC-
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW- 512 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~- 512 (937)
.|.+ .+++++. .++..||++|..+ |. .+..|+++++ .|+|+--..+ .+..+ ...|+.+++.
T Consensus 298 ~v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~ 365 (415)
T 3rsc_A 298 NVEA-HRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWG----RPLVVVPQSFDVQPMARRVDQLGLGAVLPGEK 365 (415)
T ss_dssp TEEE-ESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHHTCEEECCGGG
T ss_pred cEEE-EecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhC----CCEEEeCCcchHHHHHHHHHHcCCEEEcccCC
Confidence 3554 5777765 7788999999765 33 4679999994 5666643322 23333 2357888775
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHhh-hhhhhcCCHHHHHHHHHH
Q 002314 513 -NITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVS 557 (937)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~-~~~V~~~~~~~W~~~fl~ 557 (937)
+.++++++|.++|+++ +.++++++. .+......+...++.+.+
T Consensus 366 ~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 410 (415)
T 3rsc_A 366 ADGDTLLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAADAVEA 410 (415)
T ss_dssp CCHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 8999999999999865 333334433 333444555555554443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00059 Score=63.91 Aligned_cols=53 Identities=19% Similarity=0.149 Sum_probs=42.4
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
.|+|++|+||||... ..+.|.+.++|++|.+ .|..++|+|+++...++..+..
T Consensus 2 ~k~i~~D~DgtL~~~---------------~~~~~~~~~~l~~L~~-~G~~~~i~S~~~~~~~~~~l~~ 54 (137)
T 2pr7_A 2 MRGLIVDYAGVLDGT---------------DEDQRRWRNLLAAAKK-NGVGTVILSNDPGGLGAAPIRE 54 (137)
T ss_dssp CCEEEECSTTTTSSC---------------HHHHHHHHHHHHHHHH-TTCEEEEEECSCCGGGGHHHHH
T ss_pred CcEEEEeccceecCC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHH
Confidence 478999999999432 3467889999999987 4899999999988776655544
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.002 Score=73.41 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-.|..+++.++++++ ++++.+++||| +.||..|++.++-
T Consensus 322 kpk~~~~~~~~~~~g------i~~~~~i~vGD-~~~Di~~a~~aG~ 360 (415)
T 3p96_A 322 AGKATALREFAQRAG------VPMAQTVAVGD-GANDIDMLAAAGL 360 (415)
T ss_dssp HHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred cchHHHHHHHHHHcC------cChhhEEEEEC-CHHHHHHHHHCCC
Confidence 368899999999998 57899999999 9999999999975
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0019 Score=65.84 Aligned_cols=68 Identities=13% Similarity=0.137 Sum_probs=46.3
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
+..++||||+||||++...... ...........+-|.+.++|+.|.+ .|..++|+||.+...+.++.+
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~-~~~~~~~~~~~~~pg~~e~L~~L~~-~g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAA-TSDTPDDEHAQLTPGAQNALKALRD-QGMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTT-SCSSCCGGGGSBCTTHHHHHHHHHH-HTCCEEEECCSCHHHHHHHHT
T ss_pred CcCCEEEEcCCCceEecccccc-chhhcccccCCcCcCHHHHHHHHHH-CCCEEEEEcCChHHHHHHhcC
Confidence 3568999999999998431110 0000000123567899999999987 489999999999887755544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.011 Score=72.32 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=55.7
Q ss_pred hHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
.....+.+.....+.+++.+||+++.... ..-.+.+++.++|++|.+ .|..++++||+..........
T Consensus 503 ~~~~~~~~~~~g~~~~~va~~~~~~G~i~-----------i~D~~~~~~~~~i~~l~~-~Gi~v~~~TGd~~~~a~~ia~ 570 (723)
T 3j09_A 503 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISR 570 (723)
T ss_dssp HHHHHHHHHTTTCEEEEEEETTEEEEEEE-----------EECCSCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEe-----------ecCCcchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHH
Confidence 44556677778889999999999875421 123477899999999987 599999999999888877766
Q ss_pred ccCc
Q 002314 659 EYNL 662 (937)
Q Consensus 659 ~~~l 662 (937)
.+++
T Consensus 571 ~lgi 574 (723)
T 3j09_A 571 ELNL 574 (723)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 5543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.003 Score=64.22 Aligned_cols=42 Identities=10% Similarity=-0.142 Sum_probs=37.9
Q ss_pred ECC--CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVG--VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~g--vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+.+ .+|+.+++.++++++ ++++++++||| +.||.+|++.++-
T Consensus 138 ~~~~~kpk~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~a~~aG~ 181 (229)
T 2fdr_A 138 GADRVKPKPDIFLHGAAQFG------VSPDRVVVVED-SVHGIHGARAAGM 181 (229)
T ss_dssp CTTCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred ccCCCCcCHHHHHHHHHHcC------CChhHeEEEcC-CHHHHHHHHHCCC
Confidence 667 899999999999998 57899999999 9999999999863
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0021 Score=68.84 Aligned_cols=57 Identities=11% Similarity=0.211 Sum_probs=45.9
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhcccCc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL 662 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~l 662 (937)
+.++|+||+||||++.. .+.+.+.++|++|.+ .|..|+++|| |+...+.+.+..+++
T Consensus 13 ~~k~i~~D~DGtL~~~~---------------~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~r~~~~~~~~l~~lg~ 72 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTYN---------------GLLPGIENTFDYLKA-QGQDYYIVTNDASRSPEQLADSYHKLGL 72 (284)
T ss_dssp GCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTC
T ss_pred cCCEEEEcCcCCcCcCC---------------eeChhHHHHHHHHHH-CCCEEEEEeCCCCcCHHHHHHHHHHCCc
Confidence 47899999999999752 134788999999987 5999999995 888888777766543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0083 Score=66.01 Aligned_cols=57 Identities=9% Similarity=0.105 Sum_probs=44.6
Q ss_pred ccCCChhHHHHHHHhhcCC----------CCeEEEEcCCChhhHHHHhcccCc--------eEEeeCceEEEecC
Q 002314 620 ELKLHPDLKQPLNALCHDP----------KTTIVVLSGSDRNVLDKNFQEYNL--------WLAAENGMFLRCTT 676 (937)
Q Consensus 620 ~~~~~~~~~~~L~~L~~d~----------g~~V~IvSGR~~~~L~~~~~~~~l--------~liaenG~~ir~~~ 676 (937)
...++++.+++|.++.... ++.|+++|||+...+..+...+++ .++..+|+.+.+-+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~~~~~~~~~i~~~~~viFD~D 115 (335)
T 3n28_A 41 GHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDYARIQDVPDLTKPGLIVLDMD 115 (335)
T ss_dssp ESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEEEECTTCCCTTSCCEEEECSS
T ss_pred CCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCEEEccCcccccCCCEEEEcCC
Confidence 3457889999999998545 889999999999999998887754 45667777777533
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.014 Score=66.60 Aligned_cols=149 Identities=11% Similarity=-0.020 Sum_probs=86.4
Q ss_pred CcEEEEEeccccc-----CCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 363 RKVMLGVDRLDMI-----KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 363 ~~iIL~VdRld~~-----KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
..+++++|++... |.+..+++|+..+ ++ .+|.++... + .. + +. .. .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~----~~v~~~g~~--~---~~----~-------l~-~~--~- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DA----EIIATFDAQ--Q---LE----G-------VA-NI--P- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SS----EEEECCCTT--T---TS----S-------CS-SC--C-
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CC----EEEEEECCc--c---hh----h-------hc-cC--C-
Confidence 3577889998754 8888889888653 22 233333211 1 00 0 10 00 0
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECC
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP 511 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP 511 (937)
..|. +.+++++.+ +|..||+||.. .| ..+..|+|+|+ .|+|+.-+.+ .++.+ ...|+++++
T Consensus 319 -~~v~-~~~~~~~~~---ll~~ad~~V~~---~G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~ 385 (441)
T 2yjn_A 319 -DNVR-TVGFVPMHA---LLPTCAATVHH---GG-PGSWHTAAIHG----VPQVILPDGWDTGVRAQRTQEFGAGIALPV 385 (441)
T ss_dssp -SSEE-ECCSCCHHH---HGGGCSEEEEC---CC-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEECCT
T ss_pred -CCEE-EecCCCHHH---HHhhCCEEEEC---CC-HHHHHHHHHhC----CCEEEeCCcccHHHHHHHHHHcCCEEEccc
Confidence 1355 468888754 57999999963 44 46789999994 6788776633 23333 235788887
Q ss_pred C--CHHHHHHHHHHHHcCCHHHHHHHHHhh-hhhhhcCCHHHHHHHH
Q 002314 512 W--NITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETF 555 (937)
Q Consensus 512 ~--D~~~lA~aI~~aL~m~~~er~~r~~~~-~~~V~~~~~~~W~~~f 555 (937)
. +.++++++|.++|+++ +.++++.+. .+.........-++.+
T Consensus 386 ~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 430 (441)
T 2yjn_A 386 PELTPDQLRESVKRVLDDP--AHRAGAARMRDDMLAEPSPAEVVGIC 430 (441)
T ss_dssp TTCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5 8899999999999864 333344433 3334445555544433
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0079 Score=59.57 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=30.7
Q ss_pred EEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 762 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 762 V~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
..|...+|+.+++.+ . ++.+++||| +.||.+|++.++
T Consensus 134 ~~~~~~~k~~~l~~l----~--------~~~~i~iGD-~~~Di~~~~~ag 170 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF----R--------DGFILAMGD-GYADAKMFERAD 170 (201)
T ss_dssp EECCSSCHHHHHGGG----T--------TSCEEEEEC-TTCCHHHHHHCS
T ss_pred CcCCccCHHHHHHhc----C--------cCcEEEEeC-CHHHHHHHHhCC
Confidence 455667899999887 2 578999999 999999999874
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0052 Score=61.23 Aligned_cols=71 Identities=17% Similarity=0.223 Sum_probs=48.3
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC---------------Chhh
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS---------------DRNV 652 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR---------------~~~~ 652 (937)
.+..++++||+||||+...... .... ......+.|.+.++|++|.+ .|..++|+|+. ....
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~--~~~~-~~~~~~~~pg~~e~L~~L~~-~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~ 86 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSD--FQVD-RFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQDGLGTQSFPQADFDGPHNL 86 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--C--CCCC-SGGGCCBCTTHHHHHHHHHH-TTEEEEEEEECTTTTBTTBCHHHHHHHHHH
T ss_pred CCcCcEEEEeCCCCeEcCCCCC--cCcC-CHHHCcCCccHHHHHHHHHH-CCCEEEEEECCccccccccchHhhhhhHHH
Confidence 4678999999999999763100 0000 01345678899999999987 48999999998 3455
Q ss_pred HHHHhcccCc
Q 002314 653 LDKNFQEYNL 662 (937)
Q Consensus 653 L~~~~~~~~l 662 (937)
+...+..+++
T Consensus 87 ~~~~l~~~gl 96 (176)
T 2fpr_A 87 MMQIFTSQGV 96 (176)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 6666665544
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0094 Score=72.81 Aligned_cols=72 Identities=8% Similarity=0.158 Sum_probs=56.1
Q ss_pred hHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
.....+.+.....+.+++.+||+++.... ..-.+.+++.++|++|.+ .|..++++|||..........
T Consensus 522 ~~~~~~~~~~~G~~vl~va~d~~~~G~i~-----------i~D~i~~~~~~aI~~L~~-~Gi~v~mlTGd~~~~a~~ia~ 589 (736)
T 3rfu_A 522 LFEKADELRGKGASVMFMAVDGKTVALLV-----------VEDPIKSSTPETILELQQ-SGIEIVMLTGDSKRTAEAVAG 589 (736)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCSSHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEE-----------eeccchhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHH
Confidence 34445667778889999999999875321 123477899999999987 599999999999998888777
Q ss_pred ccCc
Q 002314 659 EYNL 662 (937)
Q Consensus 659 ~~~l 662 (937)
.+++
T Consensus 590 ~lgi 593 (736)
T 3rfu_A 590 TLGI 593 (736)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 6654
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.027 Score=63.00 Aligned_cols=100 Identities=9% Similarity=-0.023 Sum_probs=64.3
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEE----eCCCCcc--ccc--CCceEEECC
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL----SEFAGAA--QSL--GAGAILVNP 511 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVl----Se~aG~~--~~l--g~~gllVnP 511 (937)
.|.+ .++++.. .++..||+||.. |-..+..|||+|+ .|+|+ .+-.+.+ +.+ ...|+++++
T Consensus 284 ~v~~-~~~~~~~---~ll~~ad~~v~~----~G~~t~~Eal~~G----~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~ 351 (398)
T 3oti_A 284 NVRA-VGWTPLH---TLLRTCTAVVHH----GGGGTVMTAIDAG----IPQLLAPDPRDQFQHTAREAVSRRGIGLVSTS 351 (398)
T ss_dssp TEEE-ESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHHT----CCEEECCCTTCCSSCTTHHHHHHHTSEEECCG
T ss_pred cEEE-EccCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhC----CCEEEcCCCchhHHHHHHHHHHHCCCEEeeCC
Confidence 3554 5777654 567779999953 4446789999994 67777 4556666 655 246888887
Q ss_pred C--CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHH
Q 002314 512 W--NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (937)
Q Consensus 512 ~--D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl 556 (937)
. +.+.++ ++|+++ +.|+++.+...+......+...++.+.
T Consensus 352 ~~~~~~~l~----~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 393 (398)
T 3oti_A 352 DKVDADLLR----RLIGDE-SLRTAAREVREEMVALPTPAETVRRIV 393 (398)
T ss_dssp GGCCHHHHH----HHHHCH-HHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCCCHHHHH----HHHcCH-HHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 6 455555 777754 344444445555567777777666443
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=95.68 E-value=0.47 Score=53.20 Aligned_cols=146 Identities=10% Similarity=-0.002 Sum_probs=84.0
Q ss_pred CCcEEEEEeccc-ccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCccc
Q 002314 362 GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (937)
Q Consensus 362 ~~~iIL~VdRld-~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~p 440 (937)
.+.|+++.|++. ..+.+...++|++.+ +++ +|.++++...+. .+ .. ..
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~~----------------~~----~~--~~ 269 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLGR----------------ID----EG--DD 269 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCCC----------------SS----CC--TT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCccccc----------------cc----CC--CC
Confidence 456777899998 666677777777653 222 333332211000 00 00 13
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCc----cccc--CCceEEECCC--
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL--GAGAILVNPW-- 512 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~----~~~l--g~~gllVnP~-- 512 (937)
|.+ .+++++.+ ++..||++|--+ |. .+..|+++++ .|+|+--+.+- +..+ ...|+.+++.
T Consensus 270 v~~-~~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~G----vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~ 337 (404)
T 3h4t_A 270 CLV-VGEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAG----APQVVVPQKADQPYYAGRVADLGVGVAHDGPTP 337 (404)
T ss_dssp EEE-ESSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EEE-ecCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcC----CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCC
Confidence 554 57788755 557899999554 43 5678999994 56666544332 1112 1246777653
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHH
Q 002314 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (937)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~ 553 (937)
+.++++++|.++|+ + +.++++.+..+.+....+...++
T Consensus 338 ~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~~~~~~~~~ 375 (404)
T 3h4t_A 338 TVESLSAALATALT-P--GIRARAAAVAGTIRTDGTTVAAK 375 (404)
T ss_dssp CHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhhhHHHHHHH
Confidence 78999999999997 4 34445555544444333343333
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.0031 Score=65.04 Aligned_cols=60 Identities=10% Similarity=0.061 Sum_probs=35.7
Q ss_pred cCCeEEEEecCcccCCCCCC---------CCCCCccc-c-----------ccccCCChhHHHHHHHhhcCCCCeEEEEcC
Q 002314 589 SNNRLLILGFNATLTEPVDT---------PGRRGDQI-R-----------EMELKLHPDLKQPLNALCHDPKTTIVVLSG 647 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~---------P~~~~~~~-~-----------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG 647 (937)
...++|+||+||||++.... +. ..... . .....+.+.+.++|+.|.+ .|..++|+|+
T Consensus 35 ~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~-~G~~l~ivTn 112 (211)
T 2b82_A 35 RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPE-SEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR-RGDAIFFVTG 112 (211)
T ss_dssp CCCCEEEECCBTTTEECHHHHHHHHHHHCTT-SSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-HTCEEEEEEC
T ss_pred CCCCEEEEcCCCCCCcCcHHHHHHHHHhhHH-HHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHH-CCCEEEEEcC
Confidence 35789999999999985210 00 00000 0 0001234577788888876 4788888888
Q ss_pred CCh
Q 002314 648 SDR 650 (937)
Q Consensus 648 R~~ 650 (937)
++.
T Consensus 113 ~~~ 115 (211)
T 2b82_A 113 RSP 115 (211)
T ss_dssp SCC
T ss_pred CcH
Confidence 754
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=95.58 E-value=0.0072 Score=63.27 Aligned_cols=43 Identities=9% Similarity=-0.130 Sum_probs=37.9
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCC-ceEEEEecCCCCcHHHHHhcCc
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~-d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+.+..|+.+++.++++++ +++ +.+++||| +.||.+|++.++-
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~iGD-~~nDi~~a~~aG~ 199 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMELG------VYPMNHMIKVGD-TVSDMKEGRNAGM 199 (267)
T ss_dssp SSCCTTSSHHHHHHHHHHT------CCSGGGEEEEES-SHHHHHHHHHTTS
T ss_pred cCCCCCCHHHHHHHHHHhC------CCCCcCEEEEeC-CHHHHHHHHHCCC
Confidence 3567789999999999998 566 89999999 9999999999863
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.0048 Score=62.69 Aligned_cols=42 Identities=19% Similarity=0.038 Sum_probs=37.1
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+..|+.+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 144 ~~~kp~~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~a~~aG~ 185 (233)
T 3s6j_A 144 SYGKPDPDLFLAAAKKIG------APIDECLVIGD-AIWDMLAARRCKA 185 (233)
T ss_dssp SCCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCChHHHHHHHHHhC------CCHHHEEEEeC-CHHhHHHHHHCCC
Confidence 456778999999999998 57899999999 9999999999863
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.019 Score=58.95 Aligned_cols=42 Identities=10% Similarity=-0.171 Sum_probs=37.4
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+..|+.+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 162 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~a~~aG~ 203 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKGG------FKPNEALVIEN-APLGVQAGVAAGI 203 (247)
T ss_dssp SSCTTSSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHHHHHTTS
T ss_pred CCCCCCCHHHHHHHHHcC------CChhheEEEeC-CHHHHHHHHHCCC
Confidence 457788999999999998 57899999999 9999999999863
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.37 E-value=0.014 Score=61.13 Aligned_cols=43 Identities=5% Similarity=-0.182 Sum_probs=38.2
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCC-ceEEEEecCCCCcHHHHHhcCc
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~-d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+.+..|+.+++.++++++ +++ +.+++||| +.||..|.+.++-
T Consensus 164 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~a~~aG~ 207 (277)
T 3iru_A 164 VVRGRPFPDMALKVALELE------VGHVNGCIKVDD-TLPGIEEGLRAGM 207 (277)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CSCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCccEEEEcC-CHHHHHHHHHCCC
Confidence 4567889999999999998 567 99999999 9999999999863
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=95.25 E-value=0.022 Score=58.80 Aligned_cols=45 Identities=4% Similarity=-0.203 Sum_probs=40.1
Q ss_pred EEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 761 EV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|..+.+..|+.+++.++++++ ++++++++||| ..||.+|.+.++-
T Consensus 167 ~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~a~~aG~ 211 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLLD------LPPQEVMLCAA-HNYDLKAARALGL 211 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHTTC
T ss_pred cccccCCCCHHHHHHHHHHcC------CChHHEEEEcC-chHhHHHHHHCCC
Confidence 445678899999999999998 57899999999 9999999999875
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=95.22 E-value=0.027 Score=58.01 Aligned_cols=42 Identities=10% Similarity=-0.149 Sum_probs=37.2
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+..|+.+++.++++++ ++++++++||| +.||..|.+.++-
T Consensus 163 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~a~~aG~ 204 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKGG------LKADEAVVIEN-APLGVEAGHKAGI 204 (243)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCGGGEEEEEC-SHHHHHHHHHTTC
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHHHHHCCC
Confidence 456778999999999998 57899999999 9999999999863
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.0084 Score=63.85 Aligned_cols=74 Identities=8% Similarity=0.100 Sum_probs=49.1
Q ss_pred cCCeEEEEecCcccCCCCCCC------CCCCc------cccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChh----h
Q 002314 589 SNNRLLILGFNATLTEPVDTP------GRRGD------QIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN----V 652 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P------~~~~~------~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~----~ 652 (937)
.++.+++||+||||++...-- ....+ ........+-|.+++.|+.|.+ .|..|+|+|||+.. .
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~-~G~~i~ivTgR~~~~~r~~ 134 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNA-NGGTMFFVSNRRDDVEKAG 134 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHH-TTCEEEEEEEEETTTSHHH
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccccHHH
Confidence 345699999999999863100 00000 0011235567899999999987 59999999999754 6
Q ss_pred HHHHhcccCce
Q 002314 653 LDKNFQEYNLW 663 (937)
Q Consensus 653 L~~~~~~~~l~ 663 (937)
...++..+++.
T Consensus 135 T~~~L~~lGi~ 145 (260)
T 3pct_A 135 TVDDMKRLGFT 145 (260)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHcCcC
Confidence 67777776553
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.15 E-value=0.0071 Score=60.76 Aligned_cols=32 Identities=9% Similarity=0.118 Sum_probs=21.1
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhH
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 653 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 653 (937)
.+-|.+.++|++|.+.+|..++|+|+++...+
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~ 104 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYH 104 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCT
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhH
Confidence 45567777788776522677778877765443
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.0092 Score=63.63 Aligned_cols=73 Identities=7% Similarity=0.067 Sum_probs=50.2
Q ss_pred cCCeEEEEecCcccCCCCCC-------CCCCCcc------ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCh----h
Q 002314 589 SNNRLLILGFNATLTEPVDT-------PGRRGDQ------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR----N 651 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~-------P~~~~~~------~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~----~ 651 (937)
.++.+|+||+||||++...- ... .+. +......+-|.+++.|+.|.+ .|..|+|+|||+. .
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~-f~~~~w~~wv~~~~~~~~pG~~ell~~L~~-~G~ki~ivTgR~~~~~r~ 133 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKP-FDGKDWTRWVDARQSRAVPGAVEFNNYVNS-HNGKVFYVTNRKDSTEKS 133 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCC-CCHHHHHHHHHHTCCEECTTHHHHHHHHHH-TTEEEEEEEEEETTTTHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhcccccc-CCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccchHH
Confidence 45679999999999987410 000 000 011245567899999999987 5999999999975 4
Q ss_pred hHHHHhcccCce
Q 002314 652 VLDKNFQEYNLW 663 (937)
Q Consensus 652 ~L~~~~~~~~l~ 663 (937)
....++..+++.
T Consensus 134 ~T~~~L~~lGi~ 145 (262)
T 3ocu_A 134 GTIDDMKRLGFN 145 (262)
T ss_dssp HHHHHHHHHTCS
T ss_pred HHHHHHHHcCcC
Confidence 666777776553
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.029 Score=56.18 Aligned_cols=41 Identities=7% Similarity=-0.033 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+-.|+.+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 125 ~~kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~Di~~a~~aG~ 165 (205)
T 3m9l_A 125 PPKPHPGGLLKLAEAWD------VSPSRMVMVGD-YRFDLDCGRAAGT 165 (205)
T ss_dssp CCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHcCC
Confidence 45567889999999998 57899999999 9999999999863
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.021 Score=56.31 Aligned_cols=40 Identities=20% Similarity=0.034 Sum_probs=34.6
Q ss_pred CCCH--HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 766 GVTK--GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 766 gvnK--G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+..| ..+++.++++++ ++++.+++||| +.||.+|++.++-
T Consensus 137 ~~~Kp~~~~~~~~~~~~~------i~~~~~~~iGD-~~nDi~~~~~aG~ 178 (207)
T 2go7_A 137 FVRKPSPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEFAQNSGI 178 (207)
T ss_dssp CCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCCcHHHHHHHHHhC------CCcccEEEECC-CHHHHHHHHHCCC
Confidence 3445 889999999998 57899999999 9999999999864
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=94.73 E-value=0.041 Score=57.23 Aligned_cols=41 Identities=5% Similarity=-0.151 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+-.|+.+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 166 ~~Kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~a~~aG~ 206 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQLG------ILPERCVVIED-SVTGGAAGLAAGA 206 (259)
T ss_dssp CCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCChHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHHHHHCCC
Confidence 45567999999999998 57899999999 9999999999864
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=94.64 E-value=0.023 Score=56.90 Aligned_cols=39 Identities=10% Similarity=0.185 Sum_probs=33.0
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+.+.+.++|+.|.+ .|..++|+|+.+...++..+..++
T Consensus 70 ~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~ 108 (205)
T 3m9l_A 70 RPAPGAVELVRELAG-RGYRLGILTRNARELAHVTLEAIG 108 (205)
T ss_dssp EECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTT
T ss_pred CCCccHHHHHHHHHh-cCCeEEEEeCCchHHHHHHHHHcC
Confidence 567789999999987 589999999999988888777654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=94.50 E-value=0.04 Score=56.45 Aligned_cols=42 Identities=10% Similarity=-0.183 Sum_probs=37.2
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+-.|+.+++.++++++ ++++++++||| +.||..|.+.++-
T Consensus 166 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~a~~aG~ 207 (254)
T 3umg_A 166 RKYKPDPQAYLRTAQVLG------LHPGEVMLAAA-HNGDLEAAHATGL 207 (254)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHcC------CChHHEEEEeC-ChHhHHHHHHCCC
Confidence 445678999999999998 57899999999 9999999999875
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=94.43 E-value=0.053 Score=54.82 Aligned_cols=38 Identities=13% Similarity=0.086 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
.|+.+++.++++++ ++++++++||| +. ||.+|.+.++-
T Consensus 159 p~~~~~~~~~~~lg------i~~~~~~~iGD-~~~nDi~~a~~aG~ 197 (235)
T 2om6_A 159 PRKEMFEKVLNSFE------VKPEESLHIGD-TYAEDYQGARKVGM 197 (235)
T ss_dssp TCHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHHHHHTTS
T ss_pred CCHHHHHHHHHHcC------CCccceEEECC-ChHHHHHHHHHCCC
Confidence 57899999999998 57899999999 98 99999999864
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.26 E-value=0.031 Score=63.69 Aligned_cols=58 Identities=12% Similarity=0.129 Sum_probs=39.8
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
...++++||+||||+.....- .......+-..+.+.+.++|+.|.+ .|..++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~--~~~~~~~~~~~~~pgv~e~L~~L~~-~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGK--VFPTSPSDWRILYPEIPKKLQELAA-EGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCS--SSCSSTTCCEESCTTHHHHHHHHHH-TTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCc--cCCCCHHHhhhhcccHHHHHHHHHH-CCCeEEEEeCCc
Confidence 356899999999998642100 0000001122367899999999987 599999999965
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=94.01 E-value=0.19 Score=56.50 Aligned_cols=122 Identities=12% Similarity=0.024 Sum_probs=75.7
Q ss_pred CCcEEEEEecc-cccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCccc
Q 002314 362 GRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (937)
Q Consensus 362 ~~~iIL~VdRl-d~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~p 440 (937)
...++++.|++ +..|.+..+++|++.+ + .+ ++.+.++. + .+ . ..+. ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~-~~-------~----~~~~--------~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA--D-LV-------L----PDDG--------AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT--T-CC-------C----SSCG--------GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC--c-cc-------c----cCCC--------CC
Confidence 35678889999 6888888888888764 2 22 33232211 1 00 0 0000 13
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECCC--
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (937)
|. +.+++++.++ |..||+||.. -|. .+..|+++++ .|+|+--..+ -+..+ ...|+.+++.
T Consensus 287 v~-~~~~~~~~~~---l~~~d~~v~~---~G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 354 (415)
T 1iir_A 287 CF-AIGEVNHQVL---FGRVAAVIHH---GGA-GTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (415)
T ss_dssp EE-ECSSCCHHHH---GGGSSEEEEC---CCH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EeCcCChHHH---HhhCCEEEeC---CCh-hHHHHHHHcC----CCEEECCCCCccHHHHHHHHHCCCcccCCcCCC
Confidence 54 4788887654 6999999974 354 6789999994 6777765543 22223 1357888763
Q ss_pred CHHHHHHHHHHHHcC
Q 002314 513 NITEVANAIARALNM 527 (937)
Q Consensus 513 D~~~lA~aI~~aL~m 527 (937)
+.++++++|.++ ++
T Consensus 355 ~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 355 TFDSLSAALATA-LT 368 (415)
T ss_dssp CHHHHHHHHHHH-TS
T ss_pred CHHHHHHHHHHH-cC
Confidence 889999999999 65
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.01 E-value=0.064 Score=54.15 Aligned_cols=38 Identities=8% Similarity=0.049 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|+.+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 153 p~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~ 190 (230)
T 3um9_A 153 PHQKVYELAMDTLH------LGESEILFVSC-NSWDATGAKYFGY 190 (230)
T ss_dssp TCHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CChHHHHHHHHHhC------CCcccEEEEeC-CHHHHHHHHHCCC
Confidence 46788899999998 57899999999 9999999999875
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.75 E-value=0.14 Score=51.85 Aligned_cols=42 Identities=14% Similarity=-0.046 Sum_probs=36.7
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
..+-.|+.+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 159 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~a~~aG~ 201 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQ------SELRESLMIGD-SWEADITGAHGVGM 201 (240)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHHHHHcCC
Confidence 345678999999999998 57899999999 95 99999999864
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=93.74 E-value=0.077 Score=53.76 Aligned_cols=41 Identities=12% Similarity=0.012 Sum_probs=35.4
Q ss_pred CCCCHHHHHHHHHHHhc-ccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIV-HSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~-~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
.+-.|+.+++.++++++ . +++.+++||| +. ||..|.+.++-
T Consensus 156 ~~kp~~~~~~~~~~~~g~~------~~~~~i~vGD-~~~~Di~~a~~aG~ 198 (238)
T 3ed5_A 156 FQKPMKEYFNYVFERIPQF------SAEHTLIIGD-SLTADIKGGQLAGL 198 (238)
T ss_dssp SCTTCHHHHHHHHHTSTTC------CGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred CCCCChHHHHHHHHHcCCC------ChhHeEEECC-CcHHHHHHHHHCCC
Confidence 45567999999999987 4 5799999999 97 99999999864
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=93.73 E-value=0.044 Score=56.16 Aligned_cols=43 Identities=19% Similarity=0.059 Sum_probs=38.1
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCC-CceEEEEecCCCCcHHHHHhcCc
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~-~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+.+..|+.+++.++++++ ++ ++.+++||| +.||..|.+.++-
T Consensus 162 ~~~~kp~~~~~~~~~~~~g------~~~~~~~i~vGD-~~~Di~~a~~aG~ 205 (240)
T 3sd7_A 162 DGTRVNKNEVIQYVLDLCN------VKDKDKVIMVGD-RKYDIIGAKKIGI 205 (240)
T ss_dssp TSCCCCHHHHHHHHHHHHT------CCCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCCcEEEECC-CHHHHHHHHHCCC
Confidence 3557789999999999998 57 899999999 9999999999864
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=93.62 E-value=0.96 Score=55.11 Aligned_cols=172 Identities=13% Similarity=0.101 Sum_probs=106.0
Q ss_pred EEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEe
Q 002314 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (937)
Q Consensus 365 iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~ 444 (937)
++.+.-++ .|=-+..+..+.++|++-|+-+ |+++..+. ..- ..+.+.+.+ +|... ..|+|
T Consensus 525 ~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~----~~l~~~~~~----~gi~~-~r~~f- 584 (723)
T 4gyw_A 525 VYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGE----PNIQQYAQN----MGLPQ-NRIIF- 584 (723)
T ss_dssp EEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGH----HHHHHHHHH----TTCCG-GGEEE-
T ss_pred EEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHH----HHHHHHHHh----cCCCc-CeEEE-
Confidence 33345454 4557899999999999999854 66665332 111 223333332 23221 35775
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc-c-----cc---CCceEEECCCCHH
Q 002314 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-Q-----SL---GAGAILVNPWNIT 515 (937)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~-~-----~l---g~~gllVnP~D~~ 515 (937)
.+..+.++..+.|+.+||++-|--+-| +.+..||+.+ |++|+|--+... . .| |-.-+++ .|.+
T Consensus 585 ~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~-----GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia--~~~~ 656 (723)
T 4gyw_A 585 SPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA-----GTPMVTMPGETLASRVAASQLTCLGCLELIA--KNRQ 656 (723)
T ss_dssp EECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT-----TCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC--SSHH
T ss_pred CCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc-----CCCEEEccCCCccHhHHHHHHHHcCCccccc--CCHH
Confidence 567899999999999999999998877 6888999999 677777322111 0 11 2222222 4565
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhhhhhhh---cCCHHHHHHHHHHHHHHhHHH
Q 002314 516 EVANAIARALNMSPEEREKRHWHNFTHVT---THTAQEWAETFVSELNDTVVE 565 (937)
Q Consensus 516 ~lA~aI~~aL~m~~~er~~r~~~~~~~V~---~~~~~~W~~~fl~~l~~~~~~ 565 (937)
+..+.-.++-+++ +.+.....++++... -+|...|++.|-..+..++..
T Consensus 657 ~Y~~~a~~la~d~-~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 657 EYEDIAVKLGTDL-EYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 5555444444444 344444444444443 368999999888877776643
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=93.48 E-value=0.068 Score=54.27 Aligned_cols=42 Identities=10% Similarity=-0.131 Sum_probs=33.0
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+-.|+.+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 143 ~~~Kp~~~~~~~~~~~lg------i~~~~~i~vGD-s~~Di~~a~~aG~ 184 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAMLD------VSPADCAAIED-AEAGISAIKSAGM 184 (233)
T ss_dssp ------CCHHHHHHHHHT------SCGGGEEEEEC-SHHHHHHHHHTTC
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHEEEEeC-CHHHHHHHHHcCC
Confidence 345566779999999998 57899999999 9999999999864
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=93.36 E-value=0.062 Score=59.82 Aligned_cols=53 Identities=11% Similarity=0.127 Sum_probs=40.3
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC---hhhHHHHhc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQ 658 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~---~~~L~~~~~ 658 (937)
+.+.++||+||||.... .+-|.+.++|+.|.+ .|..++++|+.+ .....+.+.
T Consensus 12 ~~~~~l~D~DGvl~~g~---------------~~~p~a~~~l~~l~~-~g~~~~~vTNn~~~~~~~~~~~l~ 67 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGK---------------KPIAGASDALKLLNR-NKIPYILLTNGGGFSERARTEFIS 67 (352)
T ss_dssp CCEEEEECCBTTTEETT---------------EECTTHHHHHHHHHH-TTCCEEEECSCCSSCHHHHHHHHH
T ss_pred cCCEEEEECCCeeEcCC---------------eeCcCHHHHHHHHHH-CCCEEEEEeCCCCCCchHHHHHHH
Confidence 68899999999999752 234688999999987 599999999654 455444443
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=93.35 E-value=0.073 Score=53.97 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|..+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 157 ~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~~G~ 193 (233)
T 3umb_A 157 APAAYALAPRAFG------VPAAQILFVSS-NGWDACGATWHGF 193 (233)
T ss_dssp SHHHHTHHHHHHT------SCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhC------CCcccEEEEeC-CHHHHHHHHHcCC
Confidence 4567788899988 57899999999 9999999999864
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=93.15 E-value=0.05 Score=54.98 Aligned_cols=20 Identities=5% Similarity=0.077 Sum_probs=16.7
Q ss_pred CccceeeCCHHHHHHHHHHh
Q 002314 904 TNARFLLQSSDEVVSFLKKL 923 (937)
Q Consensus 904 t~A~y~l~~~~~V~~~L~~L 923 (937)
..|.|.+++..|+..+|..+
T Consensus 207 ~~~~~~~~~~~el~~~l~~~ 226 (230)
T 3um9_A 207 VVPDIVVSDVGVLASRFSPV 226 (230)
T ss_dssp CCCSEEESSHHHHHHTCCC-
T ss_pred CCCcEEeCCHHHHHHHHHHh
Confidence 47899999999999988765
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.04 E-value=0.23 Score=50.87 Aligned_cols=41 Identities=12% Similarity=-0.037 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
.+-.|..+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 148 ~~Kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~~Di~~a~~aG~ 189 (241)
T 2hoq_A 148 VKKPHPKIFKKALKAFN------VKPEEALMVGD-RLYSDIYGAKRVGM 189 (241)
T ss_dssp CCTTCHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHHHHHCCC
Confidence 34567799999999998 56899999999 98 99999999864
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=92.96 E-value=0.11 Score=51.25 Aligned_cols=37 Identities=11% Similarity=-0.062 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|+.+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 147 ~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~ 183 (214)
T 3e58_A 147 NPEIYLTALKQLN------VQASRALIIED-SEKGIAAGVAADV 183 (214)
T ss_dssp SSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHcC------CChHHeEEEec-cHhhHHHHHHCCC
Confidence 6677889999998 57899999999 9999999999864
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=92.78 E-value=0.37 Score=48.49 Aligned_cols=43 Identities=16% Similarity=-0.069 Sum_probs=33.4
Q ss_pred EEECCCCHH---HHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 762 VRAVGVTKG---AAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 762 V~p~gvnKG---~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
+.....++. .|++. +++++ ++++.+++||| +. ||..|.+.++-
T Consensus 148 ~~~~KP~~~~~~~~l~~-~~~lg------i~~~~~~~vGD-~~~~Di~~a~~aG~ 194 (240)
T 3smv_A 148 VGSYKPNPNNFTYMIDA-LAKAG------IEKKDILHTAE-SLYHDHIPANDAGL 194 (240)
T ss_dssp HTSCTTSHHHHHHHHHH-HHHTT------CCGGGEEEEES-CTTTTHHHHHHHTC
T ss_pred cCCCCCCHHHHHHHHHH-HHhcC------CCchhEEEECC-CchhhhHHHHHcCC
Confidence 334445666 56666 88888 57899999999 95 99999999975
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=92.66 E-value=1.3 Score=49.70 Aligned_cols=93 Identities=6% Similarity=-0.034 Sum_probs=60.7
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECCC--
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (937)
|.+ .+++++. .+|..||+||.. -|. .+.+|+++++ .|+|+.-+.+ .+..+ ...|+.+++.
T Consensus 307 v~~-~~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 374 (424)
T 2iya_A 307 VEV-HQWVPQL---DILTKASAFITH---AGM-GSTMEALSNA----VPMVAVPQIAEQTMNAERIVELGLGRHIPRDQV 374 (424)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCGGGC
T ss_pred eEE-ecCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcC----CCEEEecCccchHHHHHHHHHCCCEEEcCcCCC
Confidence 553 5778765 578999998864 343 6789999994 6777765532 12222 2357778765
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCC
Q 002314 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (937)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~ 547 (937)
+.++++++|.++|+++ +.++++.++.+.+...+
T Consensus 375 ~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~ 407 (424)
T 2iya_A 375 TAEKLREAVLAVASDP--GVAERLAAVRQEIREAG 407 (424)
T ss_dssp CHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcC
Confidence 8899999999999865 33444444444443333
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=92.55 E-value=0.055 Score=53.95 Aligned_cols=35 Identities=9% Similarity=-0.174 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|+.+++.++++++ ++.+++||| +.+|..|.+.++-
T Consensus 130 ~~~~~~~~~~~~~--------~~~~~~vGD-~~~Di~~a~~aG~ 164 (201)
T 2w43_A 130 SPKVYKYFLDSIG--------AKEAFLVSS-NAFDVIGAKNAGM 164 (201)
T ss_dssp CHHHHHHHHHHHT--------CSCCEEEES-CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhcC--------CCcEEEEeC-CHHHhHHHHHCCC
Confidence 4666778888874 577899999 9999999998864
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.51 E-value=0.087 Score=55.24 Aligned_cols=41 Identities=7% Similarity=-0.223 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~~ 812 (937)
.+-.|..+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 159 ~~Kp~~~~~~~~~~~~g------~~~~~~~~vGD-~~~~Di~~a~~aG~ 200 (263)
T 3k1z_A 159 WPKPDPRIFQEALRLAH------MEPVVAAHVGD-NYLCDYQGPRAVGM 200 (263)
T ss_dssp SCTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHTHHHHTTTC
T ss_pred CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CcHHHHHHHHHCCC
Confidence 34456788999999998 57899999999 96 99999988753
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=92.17 E-value=0.075 Score=52.59 Aligned_cols=17 Identities=12% Similarity=0.270 Sum_probs=14.5
Q ss_pred cCCeEEEEecCcccCCC
Q 002314 589 SNNRLLILGFNATLTEP 605 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (937)
+..++|+||+||||++.
T Consensus 3 ~m~k~i~fDlDGTL~~~ 19 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDT 19 (214)
T ss_dssp -CCCEEEEESBTTTBCC
T ss_pred ccccEEEEcCCCCcccc
Confidence 35789999999999986
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=92.13 E-value=0.44 Score=60.54 Aligned_cols=39 Identities=3% Similarity=0.013 Sum_probs=34.0
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+.+++.++|++|.+ .|+.|+++|||.......+...++
T Consensus 604 p~r~~~~~aI~~l~~-aGI~vvmiTGd~~~tA~~ia~~lg 642 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRT-AGIRVIMVTGDHPITAKAIAASVG 642 (1034)
T ss_pred CCchhHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcC
Confidence 477899999999987 599999999999999988777654
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=92.11 E-value=0.089 Score=53.59 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-.|+.+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 139 Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~aG~ 177 (222)
T 2nyv_A 139 KPSPTPVLKTLEILG------EEPEKALIVGD-TDADIEAGKRAGT 177 (222)
T ss_dssp CCTTHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCChHHHHHHHHHhC------CCchhEEEECC-CHHHHHHHHHCCC
Confidence 378999999999998 56899999999 9999999998864
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=91.73 E-value=0.22 Score=51.67 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=29.1
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
.+.+.+.+.|+.|.+ .+..++|+|+.+...+...+..+
T Consensus 111 ~~~~~~~~~l~~l~~-~g~~~~i~tn~~~~~~~~~l~~~ 148 (277)
T 3iru_A 111 QLIPGWKEVFDKLIA-QGIKVGGNTGYGPGMMAPALIAA 148 (277)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHhc
Confidence 456778888888876 48899999998887777666543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=91.48 E-value=0.16 Score=51.13 Aligned_cols=40 Identities=10% Similarity=0.126 Sum_probs=33.0
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
..+.+.+.+.|+.|.+ .|..++|+|+.....+...+..++
T Consensus 90 ~~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~ 129 (233)
T 3s6j_A 90 IIALPGAVELLETLDK-ENLKWCIATSGGIDTATINLKALK 129 (233)
T ss_dssp CEECTTHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHTTT
T ss_pred CccCCCHHHHHHHHHH-CCCeEEEEeCCchhhHHHHHHhcc
Confidence 3566788999999987 589999999999988888877654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=91.42 E-value=0.16 Score=52.32 Aligned_cols=42 Identities=12% Similarity=-0.053 Sum_probs=37.1
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+.+-.|+.++..++++++ ++++++++||| +.||..|.+.++-
T Consensus 162 ~~~Kp~p~~~~~~~~~l~------~~~~~~~~vGD-s~~Di~~a~~aG~ 203 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVLG------VPRDKCVYIGD-SEIDIQTARNSEM 203 (240)
T ss_dssp SCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCCC
Confidence 456789999999999998 57899999999 9999999998864
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=91.35 E-value=0.17 Score=51.19 Aligned_cols=20 Identities=5% Similarity=0.097 Sum_probs=16.6
Q ss_pred CccceeeCCHHHHHHHHHHh
Q 002314 904 TNARFLLQSSDEVVSFLKKL 923 (937)
Q Consensus 904 t~A~y~l~~~~~V~~~L~~L 923 (937)
..|.|.+++.+|+.++|...
T Consensus 210 ~~~~~v~~~~~el~~~l~~~ 229 (233)
T 3umb_A 210 VAPAAAGHDMRDLLQFVQAR 229 (233)
T ss_dssp CCCSEEESSHHHHHHHHHC-
T ss_pred CCCCEEECCHHHHHHHHHHh
Confidence 35899999999999998764
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=91.10 E-value=0.51 Score=52.92 Aligned_cols=135 Identities=10% Similarity=-0.023 Sum_probs=79.7
Q ss_pred CcEEEEEeccc---ccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcc
Q 002314 363 RKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (937)
Q Consensus 363 ~~iIL~VdRld---~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 439 (937)
..++++.|++. ..|.+..+++|++.+ + .+ ++.+.++. +.. . ..+ . .
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~~~----~--------~~~----~----~ 286 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ----G-RR----VILSRGWT--ELV----L--------PDD----R----D 286 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT----T-CC----EEEECTTT--TCC----C--------SCC----C----T
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC----C-Ce----EEEEeCCc--ccc----c--------cCC----C----C
Confidence 56778899984 567777777777653 2 22 33332221 100 0 001 0 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECC--
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP-- 511 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP-- 511 (937)
.+. +.+++++.+ +|..||+||. +-|. .+..|+++|+ .|+|+--+.+ .+..+ ...|+.+++
T Consensus 287 ~v~-~~~~~~~~~---ll~~~d~~v~---~~G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~ 354 (416)
T 1rrv_A 287 DCF-AIDEVNFQA---LFRRVAAVIH---HGSA-GTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT 354 (416)
T ss_dssp TEE-EESSCCHHH---HGGGSSEEEE---CCCH-HHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSSC
T ss_pred CEE-EeccCChHH---HhccCCEEEe---cCCh-hHHHHHHHcC----CCEEEccCCCCcHHHHHHHHHCCCccCCCCCC
Confidence 244 357888655 5699999997 4555 4889999994 5666654432 22223 235777765
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh
Q 002314 512 WNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (937)
Q Consensus 512 ~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V 543 (937)
.+.++++++|.++ .++ +.++++++..+.+
T Consensus 355 ~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~ 383 (416)
T 1rrv_A 355 PTFESLSAALTTV-LAP--ETRARAEAVAGMV 383 (416)
T ss_dssp CCHHHHHHHHHHH-TSH--HHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHh-hCH--HHHHHHHHHHHHH
Confidence 5889999999999 653 3344444443333
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=90.86 E-value=0.076 Score=52.79 Aligned_cols=35 Identities=3% Similarity=-0.119 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 771 ~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+++.++++++ ++++.+++||| +.+|..|.+.++-
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~vgD-~~~Di~~a~~aG~ 186 (206)
T 2b0c_A 152 RIYQHVLQAEG------FSPSDTVFFDD-NADNIEGANQLGI 186 (206)
T ss_dssp HHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHTTTC
T ss_pred HHHHHHHHHcC------CCHHHeEEeCC-CHHHHHHHHHcCC
Confidence 46778888888 56899999999 9999999888763
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=90.49 E-value=0.35 Score=48.43 Aligned_cols=38 Identities=8% Similarity=0.222 Sum_probs=28.6
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
.+.|.+.++|+.|.+ .|..++|+|+.+...+...+..+
T Consensus 84 ~~~pg~~~~l~~L~~-~g~~~~i~tn~~~~~~~~~l~~~ 121 (216)
T 3kbb_A 84 KENPGVREALEFVKS-KRIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHH-cCCCcccccCCcHHHHHHHHHhc
Confidence 456778888888876 48888888888887777666543
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=89.89 E-value=0.25 Score=49.23 Aligned_cols=35 Identities=9% Similarity=-0.080 Sum_probs=29.7
Q ss_pred HHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 771 ~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+++.++++++ ++++.+++||| +.+|..|.+.++-
T Consensus 154 ~~~~~~~~~~~------~~~~~~~~igD-~~~Di~~a~~aG~ 188 (211)
T 2i6x_A 154 DIFLEMIADSG------MKPEETLFIDD-GPANVATAERLGF 188 (211)
T ss_dssp HHHHHHHHHHC------CCGGGEEEECS-CHHHHHHHHHTTC
T ss_pred HHHHHHHHHhC------CChHHeEEeCC-CHHHHHHHHHcCC
Confidence 45568888888 56899999999 9999999998864
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.65 E-value=0.1 Score=53.78 Aligned_cols=42 Identities=5% Similarity=-0.112 Sum_probs=35.8
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCC--ceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAI--DYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~--d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+-.|..+++.++++++ +++ +++++||| +.||..|.+.++-
T Consensus 168 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~i~iGD-~~~Di~~a~~aG~ 211 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRFS------PPPAMEKCLVFED-APNGVEAALAAGM 211 (250)
T ss_dssp CSCTTSTHHHHHHHHTSS------SCCCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred cCCCCChHHHHHHHHHcC------CCCCcceEEEEeC-CHHHHHHHHHcCC
Confidence 345567889999999998 455 99999999 9999999999873
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.21 E-value=0.25 Score=50.10 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=51.6
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccc---------cccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQI---------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~---------~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
..++++++||+||||+.....|....+.. ......+-|.+.+.|+.|.+ ...++|+|..+...++..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~--~~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQ--LFECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHc--CCeEEEEcCCCHHHHHHHHH
Confidence 45788999999999997654432111100 00123456899999999987 39999999999999988887
Q ss_pred ccC
Q 002314 659 EYN 661 (937)
Q Consensus 659 ~~~ 661 (937)
.++
T Consensus 103 ~ld 105 (195)
T 2hhl_A 103 LLD 105 (195)
T ss_dssp HHC
T ss_pred HhC
Confidence 764
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=88.62 E-value=0.54 Score=47.65 Aligned_cols=36 Identities=6% Similarity=-0.096 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+++.++++++ ++++++++||| +.+|..|.+.++-
T Consensus 176 ~~~~~~~~~~~g------~~~~~~~~vGD-~~~Di~~a~~aG~ 211 (229)
T 4dcc_A 176 PEIFKAVTEDAG------IDPKETFFIDD-SEINCKVAQELGI 211 (229)
T ss_dssp HHHHHHHHHHHT------CCGGGEEEECS-CHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcC------CCHHHeEEECC-CHHHHHHHHHcCC
Confidence 355788889888 57899999999 9999999999874
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=87.94 E-value=0.34 Score=48.41 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=51.2
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccc---------cccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQI---------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~---------~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
.++++++||+|+||+.....|....+.. ......+-|.+.+.|++|.+ ...++|+|..+...++..+..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~--~~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh--CCCEEEEcCCCHHHHHHHHHH
Confidence 5678999999999997654442111100 00123457899999999987 499999999999998888877
Q ss_pred cC
Q 002314 660 YN 661 (937)
Q Consensus 660 ~~ 661 (937)
++
T Consensus 91 ld 92 (181)
T 2ght_A 91 LD 92 (181)
T ss_dssp HC
T ss_pred HC
Confidence 64
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.61 E-value=0.21 Score=49.71 Aligned_cols=40 Identities=20% Similarity=0.091 Sum_probs=36.5
Q ss_pred CCCH--HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 766 GVTK--GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 766 gvnK--G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+.+| +.+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 135 ~~~KP~~~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~~a~~aG~ 176 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKVN------VAPQNALFIGD-SVSDEQTAQAANV 176 (209)
T ss_dssp SCCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCCcHHHHHHHHHcC------CCcccEEEECC-ChhhHHHHHHcCC
Confidence 6789 999999999998 57899999999 9999999999875
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=86.88 E-value=0.62 Score=51.47 Aligned_cols=88 Identities=11% Similarity=0.023 Sum_probs=53.0
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc-C-CceEEECCCCHHHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL-G-AGAILVNPWNITEV 517 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l-g-~~gllVnP~D~~~l 517 (937)
+.+.+++.+ ++..||+||- +-|+| +..|+++|+ .|+|+--+.+ .+..+ . ..|+.+++.+ .+
T Consensus 292 ~~~~~p~~~---lL~~~~~~v~---h~G~~-s~~Eal~~G----vP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~--~~ 358 (400)
T 4amg_A 292 VVEWIPLGA---LLETCDAIIH---HGGSG-TLLTALAAG----VPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGS--LG 358 (400)
T ss_dssp EECCCCHHH---HHTTCSEEEE---CCCHH-HHHHHHHHT----CCEEECCC---CHHHHHHHHHHTSEEECCTTT--CS
T ss_pred EEeecCHHH---Hhhhhhheec---cCCcc-HHHHHHHhC----CCEEEecCcccHHHHHHHHHHCCCEEEcCCCC--ch
Confidence 457788655 5678999874 44665 568999994 5666643332 22222 1 2366666544 47
Q ss_pred HHHHHHHHcCCHHHHHHHHHhhhhhhhcC
Q 002314 518 ANAIARALNMSPEEREKRHWHNFTHVTTH 546 (937)
Q Consensus 518 A~aI~~aL~m~~~er~~r~~~~~~~V~~~ 546 (937)
+++|.++|+++ +.+++.+++.+.+...
T Consensus 359 ~~al~~lL~d~--~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 359 AEQCRRLLDDA--GLREAALRVRQEMSEM 385 (400)
T ss_dssp HHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCH--HHHHHHHHHHHHHHcC
Confidence 89999999875 3344455554444433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=86.71 E-value=0.13 Score=54.54 Aligned_cols=38 Identities=26% Similarity=0.345 Sum_probs=29.3
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
..+-|.+.++|+.|.+ .|..++|+||.+...++..+..
T Consensus 135 ~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~~~~ 172 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKN-EGLKIIILSGDKEDKVKELSKE 172 (263)
Confidence 3466789999999986 5899999999877766555443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=86.57 E-value=0.9 Score=44.88 Aligned_cols=19 Identities=5% Similarity=0.281 Sum_probs=16.5
Q ss_pred ccceeeCCHHHHHHHHHHh
Q 002314 905 NARFLLQSSDEVVSFLKKL 923 (937)
Q Consensus 905 ~A~y~l~~~~~V~~~L~~L 923 (937)
.|.|.+++..|+..+|..+
T Consensus 182 ~~~~~~~~~~el~~~l~~~ 200 (201)
T 2w43_A 182 KPDVIVNDFKELYEWILRY 200 (201)
T ss_dssp CCSEEESSHHHHHHHHHHH
T ss_pred CCCEEECCHHHHHHHHHhc
Confidence 5889999999999998765
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=86.41 E-value=0.17 Score=49.37 Aligned_cols=40 Identities=10% Similarity=-0.103 Sum_probs=34.4
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+..|+.+++.++++++ ++ .+++||| +.||.+|++.++-
T Consensus 134 ~~~kp~~~~~~~~~~~~~------~~--~~~~iGD-~~~Di~~a~~aG~ 173 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKYQ------IS--SGLVIGD-RPIDIEAGQAAGL 173 (190)
T ss_dssp CCCTTSCHHHHHHHHHTT------CS--SEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHcC------CC--eEEEEcC-CHHHHHHHHHcCC
Confidence 345678999999999998 44 8999999 9999999999864
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=85.64 E-value=0.2 Score=49.02 Aligned_cols=26 Identities=8% Similarity=0.100 Sum_probs=19.0
Q ss_pred EEEECCCCCccceeeCCHHHHHHHHH
Q 002314 896 SCAVGRPRTNARFLLQSSDEVVSFLK 921 (937)
Q Consensus 896 ~~~VG~~~t~A~y~l~~~~~V~~~L~ 921 (937)
+|.|+.+.+.|.|.+++.+|+.++|+
T Consensus 180 ~i~~~~~~~~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 180 SINFLESTYEGNHRIQALADISRIFE 205 (207)
T ss_dssp EEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred EEEEecCCCCCCEEeCCHHHHHHHHh
Confidence 46676432378899999999888763
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=85.59 E-value=0.19 Score=51.94 Aligned_cols=38 Identities=11% Similarity=-0.074 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|+.+++.++++++ ++++.+++||| +.||..|++.++-
T Consensus 171 p~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~aG~ 208 (243)
T 2hsz_A 171 PHPAPFYYLCGKFG------LYPKQILFVGD-SQNDIFAAHSAGC 208 (243)
T ss_dssp TSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHhC------cChhhEEEEcC-CHHHHHHHHHCCC
Confidence 36889999999998 56899999999 9999999999864
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=85.57 E-value=0.33 Score=50.34 Aligned_cols=21 Identities=19% Similarity=0.450 Sum_probs=17.9
Q ss_pred ccceeeCCHHHHHHHHHHhhh
Q 002314 905 NARFLLQSSDEVVSFLKKLAD 925 (937)
Q Consensus 905 ~A~y~l~~~~~V~~~L~~La~ 925 (937)
.|.|.+++..|+..+|..+..
T Consensus 241 ~ad~v~~~~~el~~~l~~~~~ 261 (267)
T 1swv_A 241 GAHFTIETMQELESVMEHIEK 261 (267)
T ss_dssp TCSEEESSGGGHHHHHHHHTC
T ss_pred CCceeccCHHHHHHHHHHHhh
Confidence 489999999999999987643
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=85.40 E-value=0.26 Score=49.51 Aligned_cols=20 Identities=10% Similarity=0.310 Sum_probs=18.0
Q ss_pred cceeeCCHHHHHHHHHHhhh
Q 002314 906 ARFLLQSSDEVVSFLKKLAD 925 (937)
Q Consensus 906 A~y~l~~~~~V~~~L~~La~ 925 (937)
|.|.+++.+|+..+|+.+..
T Consensus 205 ad~v~~~~~el~~~l~~~~~ 224 (229)
T 2fdr_A 205 AETVISRMQDLPAVIAAMAE 224 (229)
T ss_dssp CSEEESCGGGHHHHHHHHTC
T ss_pred CceeecCHHHHHHHHHHhhh
Confidence 89999999999999988754
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=84.83 E-value=0.3 Score=49.98 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=22.8
Q ss_pred eEEEEECCCC--------CccceeeCCHHHHHHHHHHh
Q 002314 894 YFSCAVGRPR--------TNARFLLQSSDEVVSFLKKL 923 (937)
Q Consensus 894 ~~~~~VG~~~--------t~A~y~l~~~~~V~~~L~~L 923 (937)
.-+|.|+.+. ..|.|.+++.+|+..+|+.|
T Consensus 204 ~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~l 241 (243)
T 3qxg_A 204 IFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDTI 241 (243)
T ss_dssp CEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHhh
Confidence 3466675421 25899999999999999887
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=84.47 E-value=0.25 Score=49.69 Aligned_cols=20 Identities=10% Similarity=0.228 Sum_probs=16.9
Q ss_pred ccceeeCCHHHHHHHHHHhh
Q 002314 905 NARFLLQSSDEVVSFLKKLA 924 (937)
Q Consensus 905 ~A~y~l~~~~~V~~~L~~La 924 (937)
.|.|.+++..|+..+|+.+.
T Consensus 214 ~~~~~~~~~~el~~~l~~~~ 233 (235)
T 2om6_A 214 ERGFEIPSIANLKDVIELIS 233 (235)
T ss_dssp TTEEEESSGGGHHHHHHHTC
T ss_pred CCcchHhhHHHHHHHHHHHh
Confidence 37789999999999998763
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=84.25 E-value=0.35 Score=49.18 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=19.8
Q ss_pred ccceeeCCHHHHHHHHHHhhhc
Q 002314 905 NARFLLQSSDEVVSFLKKLADA 926 (937)
Q Consensus 905 ~A~y~l~~~~~V~~~L~~La~~ 926 (937)
.|.|.+++.+|+..+|..+...
T Consensus 222 ~ad~v~~~~~el~~~l~~~~~~ 243 (247)
T 3dv9_A 222 GANLLFHSMPDFNKNWETLQSA 243 (247)
T ss_dssp TCSEEESSHHHHHHHHHHHHHH
T ss_pred CCCEEECCHHHHHHHHHHHHHH
Confidence 7899999999999999998764
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=84.20 E-value=0.27 Score=49.69 Aligned_cols=30 Identities=10% Similarity=0.165 Sum_probs=22.0
Q ss_pred eEEEEECCC------CCccceeeCCHHHHHHHHHHh
Q 002314 894 YFSCAVGRP------RTNARFLLQSSDEVVSFLKKL 923 (937)
Q Consensus 894 ~~~~~VG~~------~t~A~y~l~~~~~V~~~L~~L 923 (937)
.-+|.|+.+ ...|.|.+.+.+|+..+|...
T Consensus 198 ~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~ 233 (238)
T 3ed5_A 198 LDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNIE 233 (238)
T ss_dssp CEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTCC
T ss_pred CEEEEECCCCCCCcccCCCCeEECCHHHHHHHHHhh
Confidence 346666542 346899999999999998653
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=83.93 E-value=0.26 Score=49.79 Aligned_cols=15 Identities=13% Similarity=0.428 Sum_probs=13.6
Q ss_pred CeEEEEecCcccCCC
Q 002314 591 NRLLILGFNATLTEP 605 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (937)
.++|+||+||||++.
T Consensus 2 ik~i~fDlDGTL~d~ 16 (233)
T 3nas_A 2 LKAVIFDLDGVITDT 16 (233)
T ss_dssp CCEEEECSBTTTBCH
T ss_pred CcEEEECCCCCcCCC
Confidence 589999999999986
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=83.71 E-value=0.28 Score=49.99 Aligned_cols=21 Identities=5% Similarity=-0.043 Sum_probs=17.4
Q ss_pred CCccceeeCCHHHHHHHHHHh
Q 002314 903 RTNARFLLQSSDEVVSFLKKL 923 (937)
Q Consensus 903 ~t~A~y~l~~~~~V~~~L~~L 923 (937)
...|.|.+++..|+..+|...
T Consensus 229 ~~~~d~~~~~~~el~~~l~~~ 249 (254)
T 3umg_A 229 TGSWDISATDITDLAAQLRAG 249 (254)
T ss_dssp SSCCSEEESSHHHHHHHHHHC
T ss_pred cCCCceEECCHHHHHHHhcCC
Confidence 356889999999999998763
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=83.61 E-value=0.22 Score=51.06 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=22.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L 634 (937)
+.++|+||+||||++.. ..+.+.+.++++++
T Consensus 21 ~ik~i~fDlDGTL~d~~--------------~~~~~~~~~~~~~~ 51 (254)
T 3umc_A 21 GMRAILFDVFGTLVDWR--------------SSLIEQFQALEREL 51 (254)
T ss_dssp SCCEEEECCBTTTEEHH--------------HHHHHHHHHHHHHS
T ss_pred CCcEEEEeCCCccEecC--------------ccHHHHHHHHHHHh
Confidence 57899999999999762 23455666777665
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.86 E-value=0.33 Score=49.84 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=22.7
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L 634 (937)
...++|+||+||||++.. ..+.+...++++++
T Consensus 28 ~~ik~i~fDlDGTL~d~~--------------~~~~~~~~~~~~~~ 59 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDTE--------------RLYSVVFQEICNRY 59 (250)
T ss_dssp CCCSEEEEETBTTTBCHH--------------HHHHHHHHHHHHHT
T ss_pred cCCcEEEEcCCCCcCCCH--------------HHHHHHHHHHHHHh
Confidence 457899999999999762 23445566666664
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=82.29 E-value=0.34 Score=48.88 Aligned_cols=19 Identities=16% Similarity=0.359 Sum_probs=15.7
Q ss_pred CccceeeCCHHHHHHHHHH
Q 002314 904 TNARFLLQSSDEVVSFLKK 922 (937)
Q Consensus 904 t~A~y~l~~~~~V~~~L~~ 922 (937)
..|.|.+++.+|+..+++.
T Consensus 216 ~~~d~vi~sl~e~~~~~~~ 234 (240)
T 3qnm_A 216 FQPTYHIHSLKELMNLLEG 234 (240)
T ss_dssp SCCSEEESSTHHHHHHTC-
T ss_pred CCCceEECCHHHHHHHHhc
Confidence 5799999999999888753
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=81.84 E-value=2.8 Score=43.71 Aligned_cols=36 Identities=6% Similarity=-0.158 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCC-CCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d-~nDEdMf~~~~ 811 (937)
+...+..++++++ ++++.+++||| + .+|..+-+.++
T Consensus 178 ~p~~~~~~~~~~~------~~~~~~~~vGD-s~~~Di~~A~~aG 214 (260)
T 2gfh_A 178 APSIFYHCCDLLG------VQPGDCVMVGD-TLETDIQGGLNAG 214 (260)
T ss_dssp CHHHHHHHHHHHT------CCGGGEEEEES-CTTTHHHHHHHTT
T ss_pred CHHHHHHHHHHcC------CChhhEEEECC-CchhhHHHHHHCC
Confidence 3678899999998 56899999999 8 89999888875
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=81.65 E-value=0.56 Score=45.63 Aligned_cols=16 Identities=19% Similarity=0.196 Sum_probs=14.0
Q ss_pred CCeEEEEecCcccCCC
Q 002314 590 NNRLLILGFNATLTEP 605 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (937)
+.++|+||+||||++.
T Consensus 5 ~~k~i~fDlDGTL~d~ 20 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDN 20 (190)
T ss_dssp CCSEEEECTBTTTBCH
T ss_pred cccEEEEeCCCCcCCC
Confidence 3689999999999985
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=81.17 E-value=1.8 Score=46.14 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=41.3
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChh
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 651 (937)
..+.+++|.|||+......-. .+...-....+-|.+.++|+.|.+ .|..++|+|||+..
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~--~~~~~~~~~~~~~g~~e~L~~L~~-~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGP--YDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRESG 216 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCT--TCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCCC
T ss_pred ccceEEEeCCCCcccccCCCc--hhhhhccccCCChHHHHHHHHHHH-CCCeEEEEeCCCcc
Confidence 347888999999987643210 000011234567899999999987 59999999999743
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=80.85 E-value=0.81 Score=52.19 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=26.4
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCC------ChhhHHHH
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGS------DRNVLDKN 656 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR------~~~~L~~~ 656 (937)
.+.+.+.++|+.|.+ .|.+++|+|+. ....+...
T Consensus 100 ~~~~~~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~~~~ 139 (555)
T 3i28_A 100 KINRPMLQAALMLRK-KGFTTAILTNTWLDDRAERDGLAQL 139 (555)
T ss_dssp EECHHHHHHHHHHHH-TTCEEEEEECCCCCCSTTHHHHHHH
T ss_pred CcChhHHHHHHHHHH-CCCEEEEEeCCCccccchhhHHHHH
Confidence 466788999999987 58999999997 55555543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=80.72 E-value=0.43 Score=49.29 Aligned_cols=21 Identities=24% Similarity=0.142 Sum_probs=18.0
Q ss_pred ccceeeCCHHHHHHHHHHhhh
Q 002314 905 NARFLLQSSDEVVSFLKKLAD 925 (937)
Q Consensus 905 ~A~y~l~~~~~V~~~L~~La~ 925 (937)
.|.|.+++.+|+..+|.....
T Consensus 229 ~ad~vi~~l~el~~~l~~~~~ 249 (259)
T 4eek_A 229 GAARVLTSHAELRAALAEAGL 249 (259)
T ss_dssp TCSEEECSHHHHHHHHHHTTS
T ss_pred CcchhhCCHHHHHHHHHhccc
Confidence 488999999999999988543
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=80.43 E-value=0.9 Score=44.68 Aligned_cols=38 Identities=5% Similarity=-0.153 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+...++.++++++ ++++.+++||| +.+|..|.+.++-
T Consensus 142 p~~~~~~~~~~~~~------~~~~~~~~vgD-~~~Di~~a~~aG~ 179 (200)
T 3cnh_A 142 PNPAMYRLGLTLAQ------VRPEEAVMVDD-RLQNVQAARAVGM 179 (200)
T ss_dssp TCHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEeCC-CHHHHHHHHHCCC
Confidence 34678899999998 57899999999 9999999998864
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=80.13 E-value=0.38 Score=48.38 Aligned_cols=23 Identities=22% Similarity=0.212 Sum_probs=19.6
Q ss_pred CCccceeeCCHHHHHHHHHHhhh
Q 002314 903 RTNARFLLQSSDEVVSFLKKLAD 925 (937)
Q Consensus 903 ~t~A~y~l~~~~~V~~~L~~La~ 925 (937)
...|.|.+++..|+..+|..+..
T Consensus 217 ~~~ad~v~~~~~el~~~l~~~l~ 239 (240)
T 3smv_A 217 MPNVDFRFNSMGEMAEAHKQALK 239 (240)
T ss_dssp CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCCCCEEeCCHHHHHHHHHHHhc
Confidence 36799999999999999987653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 937 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-134 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 8e-09 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 7e-06 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 6e-04 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 408 bits (1048), Expect = e-134
Identities = 158/472 (33%), Positives = 238/472 (50%), Gaps = 22/472 (4%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NR+ SAGGL +LG K W GW+G ++ Q
Sbjct: 2 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNED--QP 51
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
L E + +YYN + N +LWP FHY RL + + +
Sbjct: 52 LKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 104
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N + AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI
Sbjct: 105 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 164
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP+ LL + DL+GF T + F+ + + G+ R +P
Sbjct: 165 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 224
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGI+ + + P+ + +L+ + + V+RLD KG+P++ LA+E LE+
Sbjct: 225 IGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 283
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++ D
Sbjct: 284 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 343
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNP 511
L ++ +DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP
Sbjct: 344 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 402
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563
++ EVA A+ RAL MS ER RH + + W E F+S+L V
Sbjct: 403 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 56.4 bits (134), Expect = 8e-09
Identities = 67/395 (16%), Positives = 135/395 (34%), Gaps = 27/395 (6%)
Query: 165 IPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADV 224
I VF +E V Y N ++ + L ++ + + +A+ + +
Sbjct: 54 IRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLND 113
Query: 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284
+ + DVV HD+H +F +K+Y + + +H S + + L
Sbjct: 114 LLREEPLPDVVHFHDWHTVFAGALIKKYF-KIPAVFTIHRLNKSK-LPAFYFHEAGLSEL 171
Query: 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344
D+ HT Y V+ +R + +G++T V GID + +
Sbjct: 172 APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYV---FNGIDCSFWNESY 228
Query: 345 EINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402
K L F + + R D + LL + L +++
Sbjct: 229 LTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF-- 286
Query: 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462
+ PE + + E G + L+ + L S+DF + + + +
Sbjct: 287 ---IIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGL 343
Query: 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 522
+ ++ G ++ +D+ ILV + E+ANAI
Sbjct: 344 VALEAMCLGAIPIASAVGGLRDIITNE---------------TGILVKAGDPGELANAIL 388
Query: 523 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557
+AL +S + K + + + ++ AE +V
Sbjct: 389 KALELSRSDLSKFRENCKKRAMSFSWEKSAERYVK 423
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 47.4 bits (111), Expect = 7e-06
Identities = 49/356 (13%), Positives = 93/356 (26%), Gaps = 47/356 (13%)
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFPS 268
+FAA A V ++ D+V HD+ P ++ ++ +H
Sbjct: 110 RFAALSLAAARIGAGVLPGWRP-DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQ 168
Query: 269 SEIHRTLPSRSDLLRAVLAAD----------LVGFHTYDYARHFVSACTR---ILGFEGT 315
+ + S+ L + L G A VS + G
Sbjct: 169 GQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGM 228
Query: 316 PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRK----------- 364
R + GID++ + A + + + A K
Sbjct: 229 GLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD 288
Query: 365 ----VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420
+ + RL KGI A ++ + V +
Sbjct: 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRL----------VVLGAGDVALEGALL 338
Query: 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFV 480
G H + D + + + + + +LR G V
Sbjct: 339 AAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG 398
Query: 481 ACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM--SPEEREK 534
D ++ A S A + +P + + AI R + P+ +
Sbjct: 399 GLADT-----VIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQ 449
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 39.8 bits (91), Expect = 6e-04
Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 24/204 (11%)
Query: 334 GIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMI-KGIPQKLLAFEKFLE 390
GID + + K L F + + R D KG+ L A E
Sbjct: 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 60
Query: 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 450
+ + +++ PE + + E G + L+ + L S+DF
Sbjct: 61 KKEFQEMRFIIIGK------GDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF 114
Query: 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 510
+ + + + + ++ G ++ +D+ ILV
Sbjct: 115 VIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETG---------------ILVK 159
Query: 511 PWNITEVANAIARALNMSPEEREK 534
+ E+ANAI +AL +S + K
Sbjct: 160 AGDPGELANAILKALELSRSDLSK 183
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 937 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.97 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.93 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.93 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.87 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.86 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.85 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.82 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.82 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.82 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.82 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.79 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.79 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.76 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.76 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.75 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.73 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.72 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.69 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.64 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.74 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.86 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 97.71 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 97.59 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 97.57 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.56 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 97.55 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 96.86 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.84 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 96.74 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 96.61 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.96 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 95.83 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.77 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 94.86 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 94.55 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 94.28 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 94.01 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 93.93 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.9 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 92.75 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 92.35 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 92.08 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 91.09 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 89.66 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 88.82 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 88.68 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 88.57 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 88.42 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 88.16 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 87.97 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 86.95 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 86.16 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 85.2 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 85.02 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 83.16 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 82.83 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 81.14 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.3e-96 Score=851.49 Aligned_cols=449 Identities=35% Similarity=0.622 Sum_probs=413.2
Q ss_pred CcEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChh
Q 002314 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (937)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (937)
+||||||||+|+...+ ..++|||++||.++ +..+|+||||+|...++++. .......+++|.||+|+++
T Consensus 1 srlivvsnr~~~~~~~--------~~~~gGl~~al~~~~~~~~g~Wvgw~g~~~~~~~~--~~~~~~~~~~~~~v~l~~~ 70 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEH--------AASAGGLAVGILGALKAAGGLWFGWSGETGNEDQP--LKKVKKGNITWASFNLSEQ 70 (456)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEESCCSSC--CEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCCCC--------CCCCccHHHHhHHHHhhCCCEEEecCCCCCcccch--hhhhhccCceeEEecCCHH
Confidence 5899999999997653 24799999999998 77899999999976554322 2233457899999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHh
Q 002314 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (937)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (937)
++++||+||||++|||+|||+.... .|+ ++|++|++||+.||++|.+.++++|+||||||||+++|.+||+
T Consensus 71 ~~~~~Y~gf~n~~LWpl~H~~~~~~--------~~~~~~~~~Y~~vN~~fA~~l~~~~~~~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 71 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhccccccccCccccc--------cccHHHHHHHHHHHHHHHHHHHHhccCCCeEEEeccchhhhHHHHHH
Confidence 9999999999999999999984322 366 5699999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCccc-CCCceeeCCeeeEEEE
Q 002314 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEG-TPEGVEDQGRLTRVAA 330 (937)
Q Consensus 252 ~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~-~~~~v~~~gr~~~i~v 330 (937)
+.|+++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|++||+.+|.++++.+. ....+.+.|+.+++.+
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~ 222 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 222 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeee
Confidence 999999999999999999999999999999999999999999999999999999999999865 3456789999999999
Q ss_pred EecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCC
Q 002314 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (937)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~ 410 (937)
+|+|||++.|......+ ..+.+.+++..++++++|++|||+|+.||+..+|+||++|++++|+++++++|+|++.|+++
T Consensus 223 ~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~ 301 (456)
T d1uqta_ 223 YPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 301 (456)
T ss_dssp CCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred ecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCccc
Confidence 99999999998766544 34567788889999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcC-CCCce
Q 002314 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (937)
Q Consensus 411 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~-~~~g~ 489 (937)
+.++|.+++.++.+++++||++|+..+|.|++++.+.++++++.++|+.|||+|+||++||||||++|||||+. .++|+
T Consensus 302 ~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~ 381 (456)
T d1uqta_ 302 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 381 (456)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985 36789
Q ss_pred EEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 490 lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
||+|+++|+++++ .+|++|||+|++++|+||.++|+||++||++|+++++++|.+||+++|+++||.+|+++
T Consensus 382 lIlS~~~G~~~~l-~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 382 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred EEEeCCCCCHHHh-CCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 9999999999999 57999999999999999999999999999999999999999999999999999999875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.97 E-value=4.7e-30 Score=264.98 Aligned_cols=222 Identities=16% Similarity=0.204 Sum_probs=180.3
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCceEE
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~i 672 (937)
|||||+||||++..++| +...++++++++|++|++ ++.|+|+|||+...++..+.. ..+++++||+.+
T Consensus 2 Li~~DlDGTL~~~~~~~---------~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~-~~~~~~~ng~~~ 69 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPL-DINMICYHGACS 69 (229)
T ss_dssp EEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCS-SCEEEEGGGTEE
T ss_pred EEEEEecCCCCCCCCCh---------hhCCCCHHHHHHHHHHhh--CCCEEEEcCCCHHHhhhhcCc-cccEEecCeEEE
Confidence 89999999999987777 567899999999999985 678999999999999877654 568999999999
Q ss_pred EecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeE
Q 002314 673 RCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752 (937)
Q Consensus 673 r~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~ 752 (937)
...+..+.... ......|.+.+...+..+....+|...+.+...+.+++....+.........+...+ ....+.
T Consensus 70 ~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~ 143 (229)
T d1u02a_ 70 KINGQIVYNNG-SDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIA-----RIFGVE 143 (229)
T ss_dssp EETTEEEECTT-GGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHH-----HHHTCE
T ss_pred ecCCceeeecc-hhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhhHHHHHHHHHHHh-----hcCCeE
Confidence 87655443322 334556777788888888888999999999999999998765443332222222222 233577
Q ss_pred EEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCCCCCCcCC
Q 002314 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKV 832 (937)
Q Consensus 753 v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (937)
+..|..++||.|+|+|||.|+++|+++ ++++|||| +.||++||++++.
T Consensus 144 ~~~~~~~idi~p~g~~Kg~al~~l~~~-----------~~~i~~GD-s~ND~~Mf~~~~~-------------------- 191 (229)
T d1u02a_ 144 TYYGKMIIELRVPGVNKGSAIRSVRGE-----------RPAIIAGD-DATDEAAFEANDD-------------------- 191 (229)
T ss_dssp EEECSSEEEEECTTCCHHHHHHHHHTT-----------SCEEEEES-SHHHHHHHHTTTT--------------------
T ss_pred EEeeceEEEEecCCCCHHHHHHHHhcc-----------ccceeecC-CCChHHHHhccCC--------------------
Confidence 889999999999999999999998743 56899999 9999999999853
Q ss_pred cchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEEEEECCCCCccceeeCC
Q 002314 833 PGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQS 912 (937)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~t~A~y~l~~ 912 (937)
+|+|+||.++|.|+|++.+
T Consensus 192 -------------------------------------------------------------~~av~~g~~~~~A~~~~~~ 210 (229)
T d1u02a_ 192 -------------------------------------------------------------ALTIKVGEGETHAKFHVAD 210 (229)
T ss_dssp -------------------------------------------------------------SEEEEESSSCCCCSEEESS
T ss_pred -------------------------------------------------------------eEEEEeCCCCccCeEEcCC
Confidence 6899999999999999999
Q ss_pred HHHHHHHHHHhhh
Q 002314 913 SDEVVSFLKKLAD 925 (937)
Q Consensus 913 ~~~V~~~L~~La~ 925 (937)
++||+.||+.|..
T Consensus 211 ~~ev~~~l~~l~~ 223 (229)
T d1u02a_ 211 YIEMRKILKFIEM 223 (229)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999854
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=2.4e-24 Score=248.62 Aligned_cols=321 Identities=17% Similarity=0.220 Sum_probs=220.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCC--CCCEEEEeCcccchHHHHHHh-hCCCCeEEEEEccCCC----chhhhccC--cc
Q 002314 207 FQSQFAAYIKANQMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP----SSEIHRTL--PS 277 (937)
Q Consensus 207 ~~~~w~~Y~~vN~~fA~~i~~~~~--~~DvVwvHDyhl~llp~~Lr~-~~~~~~I~~flH~PfP----s~e~fr~l--p~ 277 (937)
|.+.|..|...++.+++.+..... .+||||+||+|..+.+.+++. +.+++|+++++|.... ....+..+ ++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 104 YPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 444588888888888876666544 469999999999999988874 4578999999997421 01111111 10
Q ss_pred -------------chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhh
Q 002314 278 -------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344 (937)
Q Consensus 278 -------------r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~ 344 (937)
..-+..++..+|.+...+..|++..+..-. ..+.+ .+ ...+..++.++|+|||.+.|.+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~-~~~~~----~~-~~~~~~~~~vi~ngv~~~~~~p~~ 257 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLE----GV-IGSRAHVLHGIVNGIDADVWNPAT 257 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHH-HTTCH----HH-HHTTGGGEEECCCCBCTTTSCTTT
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhc-Ccchh----hh-hhhccccEEEEECCcchhhccccc
Confidence 112344667899999999888776543211 00110 00 112345788999999999886532
Q ss_pred cC-----------CchHHHHHHHHHHh----cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCC
Q 002314 345 EI-----------NPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (937)
Q Consensus 345 ~~-----------~~~~~~~~~lr~~~----~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r 409 (937)
.. .......+.++..+ .++++|+++||+++.||++.+++|++++++.++. |+++|.+
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G~G-- 329 (477)
T d1rzua_ 258 DHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLGAG-- 329 (477)
T ss_dssp CTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEECB--
T ss_pred cccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEecC--
Confidence 10 11122233444444 2467999999999999999999999999876543 5555532
Q ss_pred CChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCce
Q 002314 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (937)
Q Consensus 410 ~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~ 489 (937)
+.. ...++.++..+++. .+.+ .+..+.+++..+|+.||+||+||.+||||+|++|||||+ .|
T Consensus 330 -~~~----~~~~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G----~P 391 (477)
T d1rzua_ 330 -DVA----LEGALLAAASRHHG--------RVGV-AIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CI 391 (477)
T ss_dssp -CHH----HHHHHHHHHHHTTT--------TEEE-EESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CE
T ss_pred -Cch----HHHHHHHHHhhcCC--------eEEE-EcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcC----CC
Confidence 222 22334444444332 3554 467788999999999999999999999999999999994 89
Q ss_pred EEEeCCCCccccc--C---------CceEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHhhhhhhhcCCHHHHHHHHH
Q 002314 490 LILSEFAGAAQSL--G---------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (937)
Q Consensus 490 lVlSe~aG~~~~l--g---------~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~V~~~~~~~W~~~fl 556 (937)
+|+|..+|..+.+ | .+|++|+|.|++++|++|.++|++ .++.++++.+++. -+.++|+.-+++++
T Consensus 392 vVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~--~~~fsw~~~a~~~~ 469 (477)
T d1rzua_ 392 PVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM--KSDVSWEKSAGLYA 469 (477)
T ss_dssp EEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH--TCCCBHHHHHHHHH
T ss_pred EEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHH--HhhCCHHHHHHHHH
Confidence 9999999999877 2 279999999999999999998863 3444454444432 24589888888877
Q ss_pred HHHHH
Q 002314 557 SELND 561 (937)
Q Consensus 557 ~~l~~ 561 (937)
+-.++
T Consensus 470 ~lY~~ 474 (477)
T d1rzua_ 470 ALYSQ 474 (477)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.93 E-value=2e-24 Score=243.66 Aligned_cols=305 Identities=20% Similarity=0.221 Sum_probs=221.1
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCch---hhhcc--C------ccchHHHHhhh
Q 002314 218 NQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT--L------PSRSDLLRAVL 286 (937)
Q Consensus 218 N~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~---e~fr~--l------p~r~eil~~ll 286 (937)
....+..+.+....+|+||+|+++..+++.++++. .++|+.+++|..++.. ..+.. + +..........
T Consensus 107 ~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (437)
T d2bisa1 107 SVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGY 185 (437)
T ss_dssp HHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHH
Confidence 33444444444556799999999988888777765 5899999999876532 11110 1 11122344556
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCc
Q 002314 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 364 (937)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 364 (937)
.+|.|...+..++..... .+. ....++.++|+|+|++.|.+....+........+++++ .+++
T Consensus 186 ~~d~v~~~~~~~~~~~~~----~~~-----------~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (437)
T d2bisa1 186 IADIVTTVSRGYLIDEWG----FFR-----------NFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGV 250 (437)
T ss_dssp HSSEEEESCHHHHHHTHH----HHG-----------GGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCE
T ss_pred hhhhhcccchhhhhhhhh----hhc-----------cccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCc
Confidence 789888877755443221 111 12346788999999999887655444444555666666 3678
Q ss_pred EEEEEecccc-cCCHHHHHHHHHHhHHh--CcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 002314 365 VMLGVDRLDM-IKGIPQKLLAFEKFLEE--NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (937)
Q Consensus 365 iIL~VdRld~-~KGi~~~l~Af~~ll~~--~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (937)
+|+++||++. .||+..+++|+..+..+ .|+ +.|+++|.. .+.+.. .++.+... .+ .+
T Consensus 251 ~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~~----~~~~~~---~~~~~~~~----~~-----~~ 310 (437)
T d2bisa1 251 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG----DPELEG---WARSLEEK----HG-----NV 310 (437)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCB----CHHHHH---HHHHHHHT----CT-----TE
T ss_pred eEEEeecccccchhHHHHHhhhccccccccccc----ceeeeeccc----cccccc---chhhhccc----cc-----cc
Confidence 9999999974 79999999999988653 344 558777632 122322 22223221 11 24
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHH
Q 002314 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANA 520 (937)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~~~lA~a 520 (937)
.++.+.++.+++..+|+.||++++||..||||++++|||||+ .|+|+|..+|..+.+ +.+|++|+|.|++++|++
T Consensus 311 ~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G----~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~~ 386 (437)
T d2bisa1 311 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVKAGDPGELANA 386 (437)
T ss_dssp EEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTT----CEEEEESCTTHHHHCCTTTCEEECTTCHHHHHHH
T ss_pred eeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCC----CCEEEeCCCCcHHhEECCcEEEECCCCHHHHHHH
Confidence 556889999999999999999999999999999999999994 788999988888877 557999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 521 I~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
|.++|.++++.++++.+++++.++.+||++++++++.-.+++
T Consensus 387 i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 387 ILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999998776677777888888889999999999998765543
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.87 E-value=1.7e-21 Score=198.22 Aligned_cols=191 Identities=21% Similarity=0.243 Sum_probs=150.5
Q ss_pred ccChhhhhhhhcCCchHHHHHHHHHHh--cCCcEEEEEeccc-ccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCC
Q 002314 334 GIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (937)
Q Consensus 334 GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIL~VdRld-~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~ 410 (937)
|||.+.|.+........+....++++| +++++|++|||++ +.||++.+++|++.|.++.+.. ++.|+++|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~--~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ--EMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG--GEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC--CeEEEEEeec---
Confidence 899999988765555667778888887 4788999999997 5899999999999997543321 3568777631
Q ss_pred ChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceE
Q 002314 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 490 (937)
Q Consensus 411 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~l 490 (937)
.+.++.+. +.+...+ + .+.++.+.++.+++..+|+.||++|+||..||||++++|||+|+ .|+
T Consensus 76 -~~~~~~~~---~~~~~~~----~-----~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G----~pv 138 (196)
T d2bfwa1 76 -DPELEGWA---RSLEEKH----G-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIP 138 (196)
T ss_dssp -CHHHHHHH---HHHHHHC----T-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT----CEE
T ss_pred -ccchhhhh---hhhhhcc----c-----eeEEeeeccccccchhccccccccccccccccccccchhhhhcC----cee
Confidence 23343333 3333222 1 25567899999999999999999999999999999999999994 788
Q ss_pred EEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcC
Q 002314 491 ILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (937)
Q Consensus 491 VlSe~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~ 546 (937)
|+|..+|..+.+ +.+|++++|.|+++++++|.++|.+..+.+.++.+.+++++++|
T Consensus 139 I~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~f 195 (196)
T d2bfwa1 139 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 195 (196)
T ss_dssp EEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred eecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 888887777766 56799999999999999999999988777777767777776654
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=6.2e-21 Score=202.40 Aligned_cols=189 Identities=16% Similarity=0.228 Sum_probs=123.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc--CceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~l~liaen 668 (937)
.||||+|+||||++.. ...+++.++++|++|++ .|+.|+++|||+...+.+++..+ ..++|++|
T Consensus 2 IKli~~DlDGTLl~~~-------------~~~~~~~~~~~l~~l~~-~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDA-------------KTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAEN 67 (269)
T ss_dssp CCEEEECCCCCCSCTT-------------SCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGG
T ss_pred EEEEEEeCCccCcCCC-------------CcCChHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcccceEeec
Confidence 5899999999999763 22345789999999987 49999999999999999999887 46999999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcC---------CCceeeeec--------------ce--------
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT---------PRSHFEQRE--------------TS-------- 717 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~---------~Gs~iE~K~--------------~s-------- 717 (937)
|+.+...++..... ... .......+..+.... .+.++.... ..
T Consensus 68 Ga~i~~~~~~~~~~---~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (269)
T d1rlma_ 68 GALVYEHGKQLFHG---ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEI 141 (269)
T ss_dssp GTEEEETTEEEEEC---CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGC
T ss_pred eeEEEECCcEEEEe---ccc---hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhh
Confidence 99998754432111 111 122222233332211 111221100 00
Q ss_pred --EEEEee-ccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEE
Q 002314 718 --LVWNYK-YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (937)
Q Consensus 718 --l~~hyr-~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl 794 (937)
..+.+. ...++ +..++.+++ ..........+..+..++||.|+++|||.||++|+++++ ++.++++
T Consensus 142 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lg------i~~~~vi 210 (269)
T d1rlma_ 142 DDVLFKFSLNLPDE----QIPLVIDKL-HVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LSPQNVV 210 (269)
T ss_dssp CSCEEEEEEECCGG----GHHHHHHHH-HHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CCGGGEE
T ss_pred cchheEEEecCCHH----HHHHHHHHH-HHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhhc------cccccEE
Confidence 000000 01111 123333333 111222223345678999999999999999999999998 6789999
Q ss_pred EEecCCCCcHHHHHhcC
Q 002314 795 CIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 795 ~iGD~d~nDEdMf~~~~ 811 (937)
+||| +.||++||+.++
T Consensus 211 ~~GD-~~ND~~Ml~~ag 226 (269)
T d1rlma_ 211 AIGD-SGNDAEMLKMAR 226 (269)
T ss_dssp EEEC-SGGGHHHHHHCS
T ss_pred EEcC-CcchHHHHHhCC
Confidence 9999 999999999874
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=6.2e-21 Score=207.96 Aligned_cols=227 Identities=15% Similarity=0.148 Sum_probs=165.6
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 002314 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (937)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (937)
.++.+...+....+.++.. .+ ....++.++|+|||++.+.+... +. ....+|+.+ .++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~----~~-----------~~~~~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~ 195 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQKH----YQ-----------TEPERFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQ 195 (370)
T ss_dssp CCCEEEESCHHHHHHHHHH----HC-----------CCGGGEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTC
T ss_pred cCceEEEecHHHHHHHHHh----cC-----------CCcceEEEEEeecccccccccCc-hh---hhhhhhhccCCCccc
Confidence 4556665665555554431 11 12356789999999987765422 21 234455555 377
Q ss_pred cEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 002314 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (937)
Q Consensus 364 ~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (937)
++|+++||+.+.||++.+++|++.+.+++|+.. ++.+++.. . + +++++++.+++.. ..+++
T Consensus 196 ~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~ii~g~~--~-~------~~~~~~~~~~~~~------~~v~~ 256 (370)
T d2iw1a1 196 NLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLFVVGQD--K-P------RKFEALAEKLGVR------SNVHF 256 (370)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEEEESSS--C-C------HHHHHHHHHHTCG------GGEEE
T ss_pred eEEEEEeccccccchhhhcccccccccccccce----eeeccccc--c-c------ccccccccccccc------ccccc
Confidence 899999999999999999999999988877643 44454322 1 1 1233444444422 24665
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEE-ECCCCHHHHHHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL-VNPWNITEVANA 520 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gll-VnP~D~~~lA~a 520 (937)
.+. .+++..+|+.||++|+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|.+ ++|.|++++|++
T Consensus 257 -~g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G----~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~ 329 (370)
T d2iw1a1 257 -FSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEV 329 (370)
T ss_dssp -ESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHH
T ss_pred -ccc--ccccccccccccccccccccccccceeeecccCC----eeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHH
Confidence 344 3579999999999999999999999999999994 799999999998888 566755 488999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHH
Q 002314 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 521 I~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 559 (937)
|.++|+++ +.++++.++++++++++++..|.+...+-+
T Consensus 330 i~~ll~d~-~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 330 LRKALTQS-PLRMAWAENARHYADTQDLYSLPEKAADII 367 (370)
T ss_dssp HHHHHHCH-HHHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred HHHHHcCH-HHHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 99999864 566777788899999999999988665544
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.82 E-value=4.6e-20 Score=196.07 Aligned_cols=186 Identities=15% Similarity=0.139 Sum_probs=121.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc---CceEEee
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAAE 667 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~l~liae 667 (937)
.||||+|+||||++. ...++++++++|++|++ ++.++++|||++..+...+..+ +.++|++
T Consensus 2 ~Kli~~DlDGTL~~~--------------~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~ 65 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (267)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred eEEEEEeCCccccCC--------------cCccCHHHHHHHHHHHc--CCEEEEECCCChHHHHHHHHHhcccCCceecc
Confidence 479999999999975 35689999999999975 5689999999999988887765 4579999
Q ss_pred CceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecce-----------------E------------
Q 002314 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS-----------------L------------ 718 (937)
Q Consensus 668 nG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~s-----------------l------------ 718 (937)
||+.+...++.- +.....+.++.. ++++..........+...+.. +
T Consensus 66 nGa~i~~~~~~~--i~~~~i~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (267)
T d1nf2a_ 66 NGAIVYLPEEGV--ILNEKIPPEVAK---DIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELV 140 (267)
T ss_dssp GGTEEEETTTEE--EEECCBCHHHHH---HHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHH
T ss_pred CCeEEEeccccc--ccccCCCHHHHH---HHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHh
Confidence 999998644331 111223433333 333332222111111110000 0
Q ss_pred ------EEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCc
Q 002314 719 ------VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAID 791 (937)
Q Consensus 719 ------~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d 791 (937)
.+-+. .++ .+..++.+.+ .+.+.+ .+.+ ..+..++||.|+++|||.||++|+++++ ++.+
T Consensus 141 ~~~~~~~i~~~-~~~----~~~~~~~~~l-~~~~~~-~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~------i~~~ 207 (267)
T d1nf2a_ 141 SKMGTTKLLLI-DTP----ERLDELKEIL-SERFKD-VVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKE 207 (267)
T ss_dssp HHHCBSEEEEE-CCH----HHHHHHHHHH-HHHHTT-TSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGG
T ss_pred hhccceEEEEe-ccH----HHHHHHHHHH-HHhhCC-cEEEEEeecceeeecCCCCchhHHHHHHHHhhc------cCcc
Confidence 00000 011 1223333333 221122 2443 4578899999999999999999999998 5789
Q ss_pred eEEEEecCCCCcHHHHHhcC
Q 002314 792 YVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 792 ~vl~iGD~d~nDEdMf~~~~ 811 (937)
++++||| +.||.+||+.++
T Consensus 208 ~vva~GD-~~ND~~ml~~~~ 226 (267)
T d1nf2a_ 208 EIVVFGD-NENDLFMFEEAG 226 (267)
T ss_dssp GEEEEEC-SHHHHHHHTTCS
T ss_pred cEEEEcC-CcchHHHHHhCC
Confidence 9999999 999999998763
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=3.7e-20 Score=196.37 Aligned_cols=193 Identities=12% Similarity=0.190 Sum_probs=124.6
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC-----ceE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-----LWL 664 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-----l~l 664 (937)
..|||++|+||||++. +..++++++++|++|.+. |+.|+|+|||++..+.+++..++ .++
T Consensus 3 ~iKli~~DlDGTL~~~--------------~~~i~~~~~~al~~L~~~-gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~ 67 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELHMEQPGDYC 67 (271)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTTCCSTTCEE
T ss_pred CeeEEEEeCCccccCC--------------CCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHhcCcCCCcEE
Confidence 5799999999999975 345889999999999874 99999999999999998887753 468
Q ss_pred EeeCceEEEec-CCeeeeccccccChhHHHHHHHHHHHHHhc-----CCCceeeeecc-------------eE-------
Q 002314 665 AAENGMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRET-------------SL------- 718 (937)
Q Consensus 665 iaenG~~ir~~-~~~w~~~~~~~~~~~w~~~v~~il~~~~~~-----~~Gs~iE~K~~-------------sl------- 718 (937)
+++||+.+... ++..... ..........+..+.+..... ..+.+...+.. .+
T Consensus 68 i~~nGa~i~~~~~~~~i~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T d1rkqa_ 68 ITYNGALVQKAADGSTVAQ--TALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEK 145 (271)
T ss_dssp EEGGGTEEEETTTCCEEEE--CCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGG
T ss_pred EEcCceeEeccCCCeEEEe--ecccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhh
Confidence 99999998753 2222111 122333333444444332110 00111110000 00
Q ss_pred -------EEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeE-EEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCC
Q 002314 719 -------VWNYKYADVEFGRIQARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 790 (937)
Q Consensus 719 -------~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~-v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~ 790 (937)
...+-..+++. ..+..+.+ ...+. ..+. +..|+.++||.|.++|||.||+.|+++++ ++.
T Consensus 146 ~~~~~~~~~~~~~~~~~~----~~~~~~~l-~~~~~-~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~------i~~ 213 (271)
T d1rkqa_ 146 MDPNTQFLKVMMIDEPAI----LDQAIARI-PQEVK-EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKP 213 (271)
T ss_dssp SCTTCCBCEEEEECCHHH----HHHHHHHS-CHHHH-HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCG
T ss_pred cCcccceEEEEEecCHHH----HHHHHHHH-HHHhh-cceEEEEecCceEEecCCCCCcccccceehhhcc------cch
Confidence 00000011221 22333333 11111 1233 45678999999999999999999999998 578
Q ss_pred ceEEEEecCCCCcHHHHHhcCc
Q 002314 791 DYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 791 d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
++++|||| +.||++||+.++.
T Consensus 214 ~~ii~~GD-~~ND~~ml~~~~~ 234 (271)
T d1rkqa_ 214 EEIMAIGD-QENDIAMIEYAGV 234 (271)
T ss_dssp GGEEEEEC-SGGGHHHHHHSSE
T ss_pred hcEEEEeC-cHhHHHHHHhCCc
Confidence 89999999 9999999999864
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.82 E-value=3.1e-19 Score=183.30 Aligned_cols=186 Identities=16% Similarity=0.241 Sum_probs=129.1
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc--CceEEee
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAE 667 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~l~liae 667 (937)
|.|+|+||+||||++. ...++++++++|++|.+ .|..|+++|||+...++..+... +.+++++
T Consensus 1 kiK~i~~D~DGTL~~~--------------~~~i~~~~~~~l~~l~~-~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~ 65 (230)
T d1wr8a_ 1 KIKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAE 65 (230)
T ss_dssp CCCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEG
T ss_pred CceEEEEecCCCCcCC--------------CCccCHHHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHhcCCCcccccc
Confidence 5689999999999975 35688999999999987 59999999999999999888766 5679999
Q ss_pred CceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCC
Q 002314 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 747 (937)
Q Consensus 668 nG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~ 747 (937)
||+.+......- .. ......+. ....+...+...........+...+.+.-...+.+ ..+++.+++
T Consensus 66 ~g~~~~~~~~~~--~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------ 131 (230)
T d1wr8a_ 66 DGGAISYKKKRI--FL-ASMDEEWI-LWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVE----TVREIINEL------ 131 (230)
T ss_dssp GGTEEEETTEEE--ES-CCCSHHHH-HHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHH----HHHHHHHHT------
T ss_pred cceeeecccccc--cc-ccccHHHH-HHHHHHHhcccccceeecccceeeEEEecccccHH----HHHHHHHHh------
Confidence 999988643221 11 12232222 22222233222211111233333443321111222 235555555
Q ss_pred CCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 748 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 748 ~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
...+....+...+||+|.+++||.|++.++++++ ++++.+++||| +.||++||+.++
T Consensus 132 ~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~------i~~~~~~~iGD-~~NDi~ml~~ag 188 (230)
T d1wr8a_ 132 NLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDAFKVVG 188 (230)
T ss_dssp TCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred ccceEEeeCCcEEEEeeCCcCcchhhcccccccc------cchhheeeeec-CccHHHHHHHCC
Confidence 1245667788899999999999999999999998 56889999999 999999999874
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.82 E-value=5.6e-19 Score=188.32 Aligned_cols=188 Identities=12% Similarity=0.202 Sum_probs=123.2
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.||||+|+||||++. +..++++++++|++|.+ .|+.|+++|||++..+.+++..++ .++|++|
T Consensus 1 iKli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 65 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 65 (285)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred CeEEEEECCccccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhCCCcEEEecC
Confidence 479999999999975 34589999999999998 599999999999999999999884 5899999
Q ss_pred ceEEEecCC-eeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecc-------------------------------
Q 002314 669 GMFLRCTTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET------------------------------- 716 (937)
Q Consensus 669 G~~ir~~~~-~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~------------------------------- 716 (937)
|+.+...++ .+.. ...+.+.. .++++.+........+.....
T Consensus 66 G~~i~~~~~~~i~~---~~i~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (285)
T d1nrwa_ 66 GAVIHDPEGRLYHH---ETIDKKRA---YDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLK 139 (285)
T ss_dssp GTEEECTTCCEEEE---CCCCHHHH---HHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred ceeEEecCCceeee---ccCCHHHH---HHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhh
Confidence 999986433 2221 12333222 233322222111110100000
Q ss_pred ---------------------------eEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCC
Q 002314 717 ---------------------------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVT 768 (937)
Q Consensus 717 ---------------------------sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvn 768 (937)
...+...... .. ..........+ .....+.++ .|..++||.|+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~----~~~~~~~~~~s~~~~ldi~~~~~~ 213 (285)
T d1nrwa_ 140 QAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFS-FF-KEKLEAGWKRY----EHAEDLTLVSSAEHNFELSSRKAS 213 (285)
T ss_dssp HHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEEC-SC-HHHHHHHHHHH----TTCTTEEEECSSTTEEEEEETTCS
T ss_pred hhhhhhhccccceeechHHHHhhcccchhheeeeccc-ch-HHHHHHHHHHh----hcCCCeEEEEeCCcEEEEecccch
Confidence 0000000000 00 00111111222 122356655 46889999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
||.||++|+++++ ++.+.+++||| +.||.+||+.++.
T Consensus 214 K~~ai~~l~~~~g------i~~~~vi~~GD-~~ND~~Ml~~a~~ 250 (285)
T d1nrwa_ 214 KGQALKRLAKQLN------IPLEETAAVGD-SLNDKSMLEAAGK 250 (285)
T ss_dssp HHHHHHHHHHHTT------CCGGGEEEEES-SGGGHHHHHHSSE
T ss_pred hhhHHHHHHhhcc------cCcccEEEEeC-CHHHHHHHHhCCe
Confidence 9999999999998 67899999999 9999999998743
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.79 E-value=2.7e-19 Score=189.23 Aligned_cols=191 Identities=16% Similarity=0.176 Sum_probs=121.1
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc--c--CceEEee
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE--Y--NLWLAAE 667 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~--~--~l~liae 667 (937)
|+||||+||||++.. ...++++++++|++|.+ .|+.|+++|||++..+..++.. . ..++|++
T Consensus 2 k~if~DlDGTL~~~~-------------~~~i~~~~~~al~~l~~-~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~ 67 (260)
T d2rbka1 2 KALFFDIDGTLVSFE-------------THRIPSSTIEALEAAHA-KGLKIFIATGRPKAIINNLSELQDRNLIDGYITM 67 (260)
T ss_dssp CEEEECSBTTTBCTT-------------TSSCCHHHHHHHHHHHH-TTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEG
T ss_pred eEEEEECCCCCcCCC-------------CCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHhcCCCCceEec
Confidence 799999999999762 35688999999999997 5999999999998877644322 2 3589999
Q ss_pred CceEEEecCCe-eeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEE-------------EeeccC-hhhhH-
Q 002314 668 NGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVW-------------NYKYAD-VEFGR- 731 (937)
Q Consensus 668 nG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~-------------hyr~ad-~e~~~- 731 (937)
||+++..+++. +.. .++.+....+.+.++... .+-.+.+........ |..... ..+..
T Consensus 68 nGa~i~~~~~~i~~~----~l~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (260)
T d2rbka1 68 NGAYCFVGEEVIYKS----AIPQEEVKAMAAFCEKKG--VPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEA 141 (260)
T ss_dssp GGTEEEETTEEEEEC----CCCHHHHHHHHHHHHHHT--CCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHH
T ss_pred CCcccccCccccccc----CCCHHHHHHHHHHHHHcC--CcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHh
Confidence 99999875543 222 234444444444443321 111111111111000 000000 00000
Q ss_pred ----------HHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCC
Q 002314 732 ----------IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (937)
Q Consensus 732 ----------~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 800 (937)
....+....+... + ..+.+.. +..++||.|+++|||.|+++|+++++ ++.+++++||| +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~~------i~~~~~~a~GD-~ 211 (260)
T d2rbka1 142 SNKEVIQMTPFITEEEEKEVLPS-I--PTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFGD-G 211 (260)
T ss_dssp HTSCCSEEEECCCHHHHHHHGGG-S--TTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEEC-S
T ss_pred cCcceEEEeecCCHHHHHHHHHH-h--ccccceeecCcEEEEEeCCCCHHHHHHHHHHhcc------ccHhheeEecC-C
Confidence 0001112222021 1 2355554 56789999999999999999999998 67899999999 9
Q ss_pred CCcHHHHHhcCc
Q 002314 801 GKDEDVYAFFEP 812 (937)
Q Consensus 801 ~nDEdMf~~~~~ 812 (937)
.||++||+.++.
T Consensus 212 ~ND~~Ml~~a~~ 223 (260)
T d2rbka1 212 GNDISMLRHAAI 223 (260)
T ss_dssp GGGHHHHHHSSE
T ss_pred cccHHHHHhCCe
Confidence 999999998853
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.79 E-value=4.5e-19 Score=188.28 Aligned_cols=197 Identities=16% Similarity=0.186 Sum_probs=127.3
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc---
Q 002314 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--- 660 (937)
Q Consensus 584 ~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--- 660 (937)
+++..++.||||+|+||||+... ...++++++++|++|.+ .|+.|+|+|||++..+...+..+
T Consensus 3 ~~~~~~~ikli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~Gi~v~i~TGR~~~~~~~~~~~l~~~ 68 (283)
T d2b30a1 3 EALKGADIKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLK 68 (283)
T ss_dssp HHTTTCCCCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHH
T ss_pred ccCcccCccEEEEECCCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcc
Confidence 56778899999999999998542 35689999999999987 59999999999999998888764
Q ss_pred -----CceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceE-----------------
Q 002314 661 -----NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL----------------- 718 (937)
Q Consensus 661 -----~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl----------------- 718 (937)
....|+.||+.+....+.- ......+......+.+.+...... ...++.......
T Consensus 69 ~~~~~~~~~i~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (283)
T d2b30a1 69 KMNFYGMPGVYINGTIVYDQIGYT--LLDETIETDVYAELISYLVEKNLV-NQTIFHRGESNYVTEDNKYADFLQKMYSE 145 (283)
T ss_dssp HHTCCSCSEEEGGGTEEECTTCCE--EEECCCCHHHHHHHHHHHHHTTCG-GGEEEEETTEEEEETTCTTTTHHHHHHSC
T ss_pred cccccCCceEEEeeeEEEcCCCcE--eeecccCHHHHHHHHHHHHhhccc-ceEEEEecceeEEeccchHHHHHHHHhhc
Confidence 2457899999988533221 110123333333333333222100 011111111000
Q ss_pred -------------------EEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHH
Q 002314 719 -------------------VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAE 779 (937)
Q Consensus 719 -------------------~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~ 779 (937)
.+.+. +++ ...++...+ ...+......+..+..++||.|.++|||.|++.+++.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~ 218 (283)
T d2b30a1 146 NRSIIIRHNEMLKYRTMNKLMIVL--DPS----ESKTVIGNL-KQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKH 218 (283)
T ss_dssp CCCEEECHHHHTTCCCCSEEEECC--CTT----THHHHHHHH-HHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHH
T ss_pred cccccccHHHHhhcccceEEEEec--CHH----HHHHHHHHH-HHHhcccceEEEecceeEeecCCcchhHHHHHHHhhh
Confidence 00000 111 122333333 2212222222455788999999999999999999999
Q ss_pred hcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 780 IVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 780 l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
++ ++.+++++||| +.||++||+.++
T Consensus 219 ~~------i~~~~vi~~GD-~~ND~~Ml~~a~ 243 (283)
T d2b30a1 219 YN------ISNDQVLVVGD-AENDIAMLSNFK 243 (283)
T ss_dssp TT------CCGGGEEEEEC-SGGGHHHHHSCS
T ss_pred cc------cccceEEEecC-ChhhHHHHHhCC
Confidence 98 57899999999 999999998874
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.76 E-value=3.8e-18 Score=176.37 Aligned_cols=182 Identities=16% Similarity=0.147 Sum_probs=123.8
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc--CceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~l~liaen 668 (937)
.|+|+||+||||++. ...+++++.++|++|.+ .|..|+++|||+...+..+...+ ...++++|
T Consensus 3 iKli~~D~DGTL~~~--------------~~~i~~~~~~al~~l~~-~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~ 67 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGEN 67 (225)
T ss_dssp CCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eEEEEEecCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCchhhhHHHHHHcCCCceEEeec
Confidence 589999999999975 35678999999999987 59999999999999887766655 45799999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCcee-eeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCC
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 747 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~i-E~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~ 747 (937)
|+.+...++.-.... .. +.+...++....+..-..+ ..+.....+.+. .+++ ....+...+ .
T Consensus 68 G~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~-~---- 130 (225)
T d1l6ra_ 68 GGIMFDNDGSIKKFF----SN---EGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDPE----DVDYVRKEA-E---- 130 (225)
T ss_dssp GTEEECTTSCEEESS----CS---HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCGG----GHHHHHHHH-H----
T ss_pred ceEEEeCCccEEEec----Ch---HHHHHHHHHHHHhcCcceeecccceeeeeccc-cCHH----HHHHHHHHH-h----
Confidence 998876443322222 11 2233334433322111111 111111111111 1222 122333333 1
Q ss_pred CCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 748 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 748 ~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
...+.+..+...+|+.|.+++||.|+++|+++++ ++++++++||| +.||++||+.++
T Consensus 131 ~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~------i~~~~v~~~GD-s~nD~~m~~~a~ 187 (225)
T d1l6ra_ 131 SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPMFQLPV 187 (225)
T ss_dssp TTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHTSSS
T ss_pred hcCcEEEECCcEEEecCCccchHHHHHHHhhhhc------cchhheeeecC-CcchHHHHHHCC
Confidence 2357788888999999999999999999999998 57899999999 999999998774
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.76 E-value=9.6e-19 Score=182.87 Aligned_cols=187 Identities=12% Similarity=0.140 Sum_probs=123.3
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC----ceEE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLA 665 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l~li 665 (937)
++.|||+|+||||++.. .. ++..+++.++.+ .+..|+|+|||++..+.+++..++ .++|
T Consensus 2 ~~~li~~DlDGTL~~~~--------------~~--~~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i 64 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGDQ--------------QA--LEHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWL 64 (244)
T ss_dssp CSEEEEECTBTTTBSCH--------------HH--HHHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEE
T ss_pred CceEEEEECcccCCCCC--------------CC--HHHHHHHHHHHc-CCCEEEEECCCCHHHHHHHHHHcCCCCCceEE
Confidence 56799999999999752 12 244556666655 589999999999999999888763 3689
Q ss_pred eeCceEEEecCCe---eeeccccccChhHHHHHHHHHHHHHhcCCCce----eeeecceEEEEeeccChhhhHHHHHHHH
Q 002314 666 AENGMFLRCTTGK---WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH----FEQRETSLVWNYKYADVEFGRIQARDML 738 (937)
Q Consensus 666 aenG~~ir~~~~~---w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~----iE~K~~sl~~hyr~ad~e~~~~~a~el~ 738 (937)
++||+.+...... |...+.. .|. ..++..+....++.. .+.....+.+++.....+. ...++.
T Consensus 65 ~~~G~~i~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 134 (244)
T d1s2oa1 65 TAVGSEIYHPEGLDQHWADYLSE----HWQ---RDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACPT---VIDQLT 134 (244)
T ss_dssp ETTTTEEEETTEECHHHHHHHHT----TCC---HHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCTH---HHHHHH
T ss_pred eccceEEEEccCcchHHHHHHHH----HHh---HHHHHHHHhhcccccccChhhhcceEEEEeccccccHH---HHHHHH
Confidence 9999999864321 2211111 111 112223333344433 2333455666655332221 122333
Q ss_pred HHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 739 QHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 739 ~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+ ..... ....+..++.++||.|.+++||.|+++|+++++ ++.+.+++||| +.||++||+.++.
T Consensus 135 ~~~-~~~~~-~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~g------i~~~~~v~~GD-~~ND~~Ml~~~~~ 199 (244)
T d1s2oa1 135 EML-KETGI-PVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGLFETSAR 199 (244)
T ss_dssp HHH-HTSSC-CEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHTSSSE
T ss_pred HHH-Hhhcc-cceeeecCCcEEEEEeCccchhHHHHHHHHhcc------CChhhEEEEcC-CCCCHHHHhhCCc
Confidence 333 33222 122344677899999999999999999999998 57889999999 9999999999976
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=6.8e-18 Score=173.94 Aligned_cols=195 Identities=16% Similarity=0.197 Sum_probs=113.6
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc----CceEE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLA 665 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~----~l~li 665 (937)
..||++||+||||++. ...++++++++|++|.+ ++.++++|||+...+...+... ..+++
T Consensus 2 ~~kl~~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~ 65 (243)
T d2amya1 2 GPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVVEKYDYVF 65 (243)
T ss_dssp CSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CCEEEEEcCcCCeeCC--------------CCcCCHHHHHHHHHHHc--CCCEEEEcCCChHHhHHHHhhhccccceEEe
Confidence 4689999999999976 35689999999999975 5578999999998887776654 34556
Q ss_pred eeCceEEEecCCe-eeeccccccChhHHHHHHHHHHHHHhcCCC-----ceeeeecceEEEEeecc--Chhhh-------
Q 002314 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPR-----SHFEQRETSLVWNYKYA--DVEFG------- 730 (937)
Q Consensus 666 aenG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~~~G-----s~iE~K~~sl~~hyr~a--d~e~~------- 730 (937)
+.+|+.+...++. +...++.................+...... ...+.......+..... +....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (243)
T d2amya1 66 PENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELD 145 (243)
T ss_dssp SGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHH
T ss_pred cCcEEEEecCCccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhh
Confidence 6677766554332 222211111111111111111111111111 11222222222222211 11100
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC----Cc
Q 002314 731 --RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG----KD 803 (937)
Q Consensus 731 --~~~a~el~~~L~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~----nD 803 (937)
.....+....+ ........+.+ ..+..++||.|+++|||+||++|++ ++.+++++||| +. ||
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~~---------~~~~ev~afGD-~~~~g~ND 214 (243)
T d2amya1 146 KKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVEN---------DGYKTIYFFGD-KTMPGGND 214 (243)
T ss_dssp HHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTTT---------SCCSEEEEEEC-SCC---CC
T ss_pred cchhhhHHHHHHH-HHHhcccceEEEecCCccceeeccccCHHHHHHHHhC---------CCcceEEEEcC-CCCCCCCc
Confidence 01112333333 22223334554 4568899999999999999998853 35799999999 76 99
Q ss_pred HHHHHhcC
Q 002314 804 EDVYAFFE 811 (937)
Q Consensus 804 EdMf~~~~ 811 (937)
++||++++
T Consensus 215 i~Ml~~~g 222 (243)
T d2amya1 215 HEIFTDPR 222 (243)
T ss_dssp CHHHHCTT
T ss_pred HHHHHccC
Confidence 99999874
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.73 E-value=1.4e-17 Score=172.38 Aligned_cols=182 Identities=16% Similarity=0.103 Sum_probs=111.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|+||+|+||||++.. .+++++++|++|.+ .|+.|+++|||++..+..++..++ .++|++|
T Consensus 2 iKli~~DlDGTLl~~~----------------~~~~~~~ai~~l~~-~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~n 64 (243)
T d1wzca1 2 IRLIFLDIDKTLIPGY----------------EPDPAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (243)
T ss_dssp EEEEEECCBTTTBSSS----------------CSGGGHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred cEEEEEeCCCCCCCCC----------------CCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhcccccccccC
Confidence 4899999999999642 24678899999987 599999999999999999999884 5799999
Q ss_pred ceEEEecCCeee-eccc--------cccChhHHHHHHHHHH---HHHhcCCCceee-------------------eecce
Q 002314 669 GMFLRCTTGKWM-TTMP--------EHLNMEWVDSLKHVFE---YFTERTPRSHFE-------------------QRETS 717 (937)
Q Consensus 669 G~~ir~~~~~w~-~~~~--------~~~~~~w~~~v~~il~---~~~~~~~Gs~iE-------------------~K~~s 717 (937)
|+.+...++... .... ...... ...+...+. ............ .....
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (243)
T d1wzca1 65 GSAIFIPKGYFPFDVKGKEVGNYIVIELGIR-VEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYS 143 (243)
T ss_dssp TTEEEECTTCCC----------CEEEECSCC-HHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSE
T ss_pred CcEEEcCCCceecccchhHHHHHHHHHHhhh-HHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcc
Confidence 999986433210 0000 000000 111222221 111110000000 00011
Q ss_pred EEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEe
Q 002314 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (937)
Q Consensus 718 l~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iG 797 (937)
......... ...+.... ..+.+..+ ..+++.|.+++||.|+++++++++. ++.++++|||
T Consensus 144 ~~~~~~~~~------~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~~~-----~~~~~~~a~G 203 (243)
T d1wzca1 144 ETIFEWSRD------GWEEVLVE--------GGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYKR-----LGQIESYAVG 203 (243)
T ss_dssp EEECBCSSS------CHHHHHHH--------TTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHHT-----TSCEEEEEEE
T ss_pred hhhhhhhhH------HHHHhhhh--------cCeEEeec-ccccchhhhhccHHHHHHHHHHhcC-----CCcccEEEEc
Confidence 111100000 00111111 13445444 4478999999999999999999852 4678999999
Q ss_pred cCCCCcHHHHHhcC
Q 002314 798 HFLGKDEDVYAFFE 811 (937)
Q Consensus 798 D~d~nDEdMf~~~~ 811 (937)
| +.||.+||++++
T Consensus 204 D-~~ND~~Ml~~a~ 216 (243)
T d1wzca1 204 D-SYNDFPMFEVVD 216 (243)
T ss_dssp C-SGGGHHHHTTSS
T ss_pred C-CHhHHHHHHcCC
Confidence 9 999999998873
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=5.6e-17 Score=166.21 Aligned_cols=189 Identities=15% Similarity=0.146 Sum_probs=116.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC---ceEEee
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAE 667 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~---l~liae 667 (937)
..|||+|+||||++. ...++++++++|++|.+ .|+.++++|||+...+.+.+..++ .++|++
T Consensus 4 ~~li~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~ 68 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAE 68 (232)
T ss_dssp CEEEEEECTTTTSCS--------------SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEG
T ss_pred CEEEEEECCCCccCC--------------cCcCCHHHHHHHHHHHH-CCCEEEEEeCCChhhchhHHHHhccCCceEEcc
Confidence 458999999999975 24578899999999987 599999999999999999988763 579999
Q ss_pred CceEEEecCCe-eeeccc---cccChhHHHHHHHHHHHHHhcCCCceeee----------------------ecceEEEE
Q 002314 668 NGMFLRCTTGK-WMTTMP---EHLNMEWVDSLKHVFEYFTERTPRSHFEQ----------------------RETSLVWN 721 (937)
Q Consensus 668 nG~~ir~~~~~-w~~~~~---~~~~~~w~~~v~~il~~~~~~~~Gs~iE~----------------------K~~sl~~h 721 (937)
||+.+...... .....+ ......+.............. ....... ........
T Consensus 69 nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
T d1xvia_ 69 NGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHF-KFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLI 147 (232)
T ss_dssp GGTEEECCTTCTTSTTTTEEECSSCHHHHHHHHHHHHHHHCC-CEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEE
T ss_pred CCeEEEecCCccccchhhhhhhHHHHHHHHHhhhhhhhhhcc-ccccccchhhhhhhhhhcccchhhhhhhhcceeeeec
Confidence 99999853221 000000 011111111111111111000 0000000 00000000
Q ss_pred eeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHh---cccccCCCCCceEEEEec
Q 002314 722 YKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEI---VHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 722 yr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l---~~~~~~~~~~d~vl~iGD 798 (937)
.. ...+ ......... . .....+..+...+++.|.+++||.|++.|++.+ + ++.+++++|||
T Consensus 148 ~~-~~~~----~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~------i~~~~~iafGD 211 (232)
T d1xvia_ 148 WR-DSDE----RMAQFTARL-N----ELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLS------GKRPTTLGLGD 211 (232)
T ss_dssp EC-SCHH----HHHHHHHHH-H----HTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHH------SSCCEEEEEES
T ss_pred cc-ccHH----HHHHHHHHh-h----hccceeeeccceeeccCCCchHHHHHHHHHHHHHHcC------CChhcEEEEcC
Confidence 00 0100 111222222 1 123456667778999999999999999999864 4 56889999999
Q ss_pred CCCCcHHHHHhcCc
Q 002314 799 FLGKDEDVYAFFEP 812 (937)
Q Consensus 799 ~d~nDEdMf~~~~~ 812 (937)
+.||++||++++.
T Consensus 212 -~~NDl~Ml~~a~~ 224 (232)
T d1xvia_ 212 -GPNDAPLLEVMDY 224 (232)
T ss_dssp -SGGGHHHHHTSSE
T ss_pred -CHhHHHHHHhCCe
Confidence 9999999999976
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.69 E-value=8.2e-17 Score=158.85 Aligned_cols=143 Identities=20% Similarity=0.227 Sum_probs=113.3
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 002314 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (937)
Q Consensus 363 ~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (937)
..++|+|||+++.||++.+++|++++ |+.+ |+++|..+ +.+.++.+.+++.+.. . ..|+
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~~----~-------~~v~ 70 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKIA----P-------DNVK 70 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHHS----C-------TTEE
T ss_pred CCEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhcccc----c-------CcEE
Confidence 35688999999999999999999876 4443 66666443 2344444444443321 1 2477
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHH
Q 002314 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANA 520 (937)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~a 520 (937)
+ .+.++.+++..+|+.||++++||..||+|++++|||+|+ .|+|+|..+|..+.+ +.+|+++++ |+++++++
T Consensus 71 ~-~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g----~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~ 144 (166)
T d2f9fa1 71 F-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDA 144 (166)
T ss_dssp E-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHH
T ss_pred E-eeccccccccccccccccccccccccccccccccccccc----ccceeecCCcceeeecCCcccccCCC-CHHHHHHH
Confidence 6 589999999999999999999999999999999999994 799999999988877 567888876 89999999
Q ss_pred HHHHHcCCHHHH
Q 002314 521 IARALNMSPEER 532 (937)
Q Consensus 521 I~~aL~m~~~er 532 (937)
|.++++++...+
T Consensus 145 i~~l~~~~~~~~ 156 (166)
T d2f9fa1 145 MKKVSKNPDKFK 156 (166)
T ss_dssp HHHHHHCTTTTH
T ss_pred HHHHHhCHHHHH
Confidence 999999875433
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=8.3e-16 Score=157.63 Aligned_cols=194 Identities=21% Similarity=0.225 Sum_probs=107.6
Q ss_pred eEEE-EecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHh-ccc-----CceE
Q 002314 592 RLLI-LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF-QEY-----NLWL 664 (937)
Q Consensus 592 rLI~-lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~-~~~-----~l~l 664 (937)
|+|+ ||+||||++. +..++++++++|++|.+ .| .++++|||....+...+ ..+ ..++
T Consensus 1 k~i~lFDlDGTLl~~--------------~~~is~~~~~~i~~l~~-~g-~~~i~tgrr~~~~~~~~~~~~~~~~~~~~~ 64 (244)
T d2fuea1 1 RVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-RV-QIGVVGGSDYCKIAEQLGDGDEVIEKFDYV 64 (244)
T ss_dssp CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-TS-EEEEECSSCHHHHHHHHSSTTTHHHHCSEE
T ss_pred CEEEEEccccCccCC--------------CCcCCHHHHHHHHHHHh-CC-CEEEEecCChhhhhhhhhhhhcccccccee
Confidence 4555 5999999986 35689999999999976 35 56777777766655443 332 3578
Q ss_pred EeeCceEEEecCCe-eeeccccccChhHHHHHHH-HHHHHHhcCC----CceeeeecceEEEEeeccChh------hhH-
Q 002314 665 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKH-VFEYFTERTP----RSHFEQRETSLVWNYKYADVE------FGR- 731 (937)
Q Consensus 665 iaenG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~-il~~~~~~~~----Gs~iE~K~~sl~~hyr~ad~e------~~~- 731 (937)
++.+|+.+...+.. |...+.............. .......... ..+.........++....... +..
T Consensus 65 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (244)
T d2fuea1 65 FAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 144 (244)
T ss_dssp EEGGGTEEEETTEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred ecccceeeccCCccceeechhHHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhh
Confidence 99999998864332 2211100111111111111 1111111111 111111222222222211100 000
Q ss_pred ----HHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC----C
Q 002314 732 ----IQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG----K 802 (937)
Q Consensus 732 ----~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~----n 802 (937)
....+....+... .....+.+. .+..++||.|+++|||.||++|++. +.+++++||| +. |
T Consensus 145 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~~---------~~~ev~afGD-~~~~G~N 213 (244)
T d2fuea1 145 DKKEKIREKFVEALKTE-FAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQD---------SFDTIHFFGN-ETSPGGN 213 (244)
T ss_dssp HHHHCHHHHHHHHHHHH-TTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTTS---------CCSEEEEEES-CCSTTST
T ss_pred ccchhhHHHHHHHHHHH-hhccceeEeeccCccceecchhccHHHHHHHHhcC---------ChhhEEEEcC-CCCCCCC
Confidence 0011112222111 122234443 5678999999999999999998752 5789999999 86 9
Q ss_pred cHHHHHhcCc
Q 002314 803 DEDVYAFFEP 812 (937)
Q Consensus 803 DEdMf~~~~~ 812 (937)
|++||++++.
T Consensus 214 D~eml~~a~~ 223 (244)
T d2fuea1 214 DFEIFADPRT 223 (244)
T ss_dssp THHHHHSTTS
T ss_pred cHHHHHcCCC
Confidence 9999999974
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.74 E-value=2.7e-10 Score=113.18 Aligned_cols=42 Identities=7% Similarity=0.021 Sum_probs=34.9
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.....|+...+.++++++ ++.++|+|||| +.||.+||++++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~------i~~~eviaiGD-g~NDi~Ml~~Ag~ 166 (206)
T d1rkua_ 125 GYQLRQKDPKRQSVIAFK------SLYYRVIAAGD-SYNDTTMLSEAHA 166 (206)
T ss_dssp EEECCSSSHHHHHHHHHH------HTTCEEEEEEC-SSTTHHHHHHSSE
T ss_pred cccccchhhHHHHHHHhc------ccccceEEecC-CccCHHHHHhCCc
Confidence 345567777888888888 46899999999 9999999999853
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=97.86 E-value=4.9e-06 Score=83.56 Aligned_cols=39 Identities=10% Similarity=0.125 Sum_probs=30.8
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
..+.|.+.+.|+.|.+ .|..++|+||-....++.++..+
T Consensus 74 ~~l~pg~~~~l~~L~~-~g~~~~ivS~~~~~~i~~~l~~l 112 (226)
T d2feaa1 74 AKIREGFREFVAFINE-HEIPFYVISGGMDFFVYPLLEGI 112 (226)
T ss_dssp CCBCTTHHHHHHHHHH-HTCCEEEEEEEEHHHHHHHHTTT
T ss_pred cchhHHHHHHHHHHHh-cccccccCCcchhhhHHHHHHHc
Confidence 4577788888888876 48888888888888888877665
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=97.71 E-value=1e-05 Score=83.40 Aligned_cols=57 Identities=16% Similarity=0.189 Sum_probs=43.1
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhcccCc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL 662 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~l 662 (937)
+.++|+||+||||.+.. ..+ +.+.++|++|.+ .+..++++| +|+...+.+.+...++
T Consensus 6 ~ik~vlFDlDGTL~~~~--------------~~i-~~a~e~l~~l~~-~g~~~~~~TN~~~~~~~~~~~~~~~~g~ 65 (261)
T d1vjra_ 6 KIELFILDMDGTFYLDD--------------SLL-PGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGV 65 (261)
T ss_dssp GCCEEEECCBTTTEETT--------------EEC-TTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTC
T ss_pred hCCEEEEeCCCeeEECC--------------ccC-chHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhhcc
Confidence 56899999999999752 223 577899999987 589999997 5666666666655544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=97.59 E-value=3.4e-05 Score=79.14 Aligned_cols=52 Identities=8% Similarity=0.141 Sum_probs=39.2
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhc
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQ 658 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~~~ 658 (937)
.++++||+||||.+.. ..+ +.+.++|++|.+ .|..++++|+ |+...+.+.+.
T Consensus 2 yk~v~fDlDGTL~~~~--------------~~i-~~a~~~i~~l~~-~g~~~~~~Tn~s~~~~~~~~~~L~ 56 (253)
T d1yv9a1 2 YQGYLIDLDGTIYLGK--------------EPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRLA 56 (253)
T ss_dssp CCEEEECCBTTTEETT--------------EEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHHH
T ss_pred CCEEEEcCCCccEeCC--------------CcC-ccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHHH
Confidence 5789999999998752 224 678999999987 4899999975 55666555443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=97.57 E-value=2.7e-05 Score=79.90 Aligned_cols=56 Identities=14% Similarity=0.236 Sum_probs=43.7
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhcccC
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYN 661 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~ 661 (937)
+.|+|+||+||||.+.. ..+ +.+.++|++|.+ .|..|+++| +|+...+.+.+..++
T Consensus 2 ~ik~VifDlDGTL~~~~--------------~~i-~~a~e~i~~l~~-~g~~~~~~TN~~~~~~~~~~~~l~~~G 60 (250)
T d2c4na1 2 TIKNVICDIDGVLMHDN--------------VAV-PGAAEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFATAG 60 (250)
T ss_dssp CCCEEEEECBTTTEETT--------------EEC-TTHHHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHHHTT
T ss_pred CCCEEEEECCCeeEECC--------------CcC-ccHHHHHHHHHH-CCCcEEEEeCCCCCCHHHHHHHHhhcc
Confidence 57899999999999752 223 467899999987 589999987 788888877776554
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.56 E-value=4.5e-05 Score=71.39 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=44.7
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
.++.+.|+||+||||++..... ..+...-....+-|.++++|+.|.+ .|..|+++|||+
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~--~~~~~~~~~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~ 62 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRG--PYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRE 62 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCC--TTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSC
T ss_pred CCCCcEEEEEcCCCcEeCCCCC--cCCccccccCccCHHHHHHHHHHHh-ccCeEEEEecCc
Confidence 4678999999999999764321 1111122345778999999999987 699999999996
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.55 E-value=0.00011 Score=73.54 Aligned_cols=41 Identities=17% Similarity=0.395 Sum_probs=33.0
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
..+.|.+.++|+.|.+ .|..++||||-....++.++..+++
T Consensus 81 ~~l~pg~~~~i~~lk~-~G~~~~ivS~~~~~~v~~i~~~lgi 121 (217)
T d1nnla_ 81 PHLTPGIRELVSRLQE-RNVQVFLISGGFRSIVEHVASKLNI 121 (217)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHh-CCCEEEEECCCchHHHHHHHHHhCC
Confidence 3467899999999987 5899999999888888887776653
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=96.86 E-value=0.00072 Score=61.66 Aligned_cols=48 Identities=19% Similarity=0.239 Sum_probs=39.3
Q ss_pred eEEEEecCcccCCCCCC-CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 592 RLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~-P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
+-|++|+||||+..... + ..+.|-+.+++.|..|.+ .|+.++|.|+|.
T Consensus 2 K~i~~DiDGTI~~~~~~~y---------~~~~P~~~~Ie~l~~l~~-~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDY---------RNVLPRLDVIEQLREYHQ-LGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCG---------GGCCBCHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCCc---------CccCcCHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 45899999999975321 1 356788999999999987 599999999996
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.84 E-value=0.0006 Score=62.12 Aligned_cols=59 Identities=19% Similarity=0.172 Sum_probs=44.3
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhH---HHHhcccCce
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL---DKNFQEYNLW 663 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L---~~~~~~~~l~ 663 (937)
|++|+||||+... .+ ....|-+.+++.|++|.+ .|+.++|.|+|+-... .+|+...++.
T Consensus 3 i~vDiDGTl~~~~-~~---------~~~kPi~~~Ie~l~~L~~-~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 3 IAVDFDGTIVEHR-YP---------RIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp EEECCBTTTBCSC-TT---------SCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred EEEEcCCCcCCCC-CC---------ccccccHHHHHHHHHHHH-CCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 7999999998753 23 234577889999999987 5999999999986554 3565554443
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=96.74 E-value=0.00028 Score=72.16 Aligned_cols=53 Identities=6% Similarity=0.112 Sum_probs=40.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhcc
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQE 659 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~~~~ 659 (937)
.+.|+||+||||.+.. . +-+.+.++|++|.+ .+..++++|+ |+...+.+.+..
T Consensus 2 yk~vlFDlDGTL~~~~--------------~-~i~~a~e~l~~l~~-~g~~~~~~TN~s~~~~~~~~~~l~~ 57 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKGK--------------D-RIPAGEDFVKRLQE-RQLPYILVTNNTTRTPEMVQEMLAT 57 (253)
T ss_dssp CCEEEEECBTTTEETT--------------E-ECHHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred cCEEEEcCcCceEECC--------------C-cCccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 5789999999998752 1 23778999999887 5899999975 566667666643
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=96.61 E-value=0.0028 Score=61.28 Aligned_cols=44 Identities=14% Similarity=0.041 Sum_probs=38.7
Q ss_pred EEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 762 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 762 V~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+.....+|..+++.++++++ +++++|+|||| |.||.+||+.++.
T Consensus 74 ~~~~~~~K~~~l~~~~~~~~------i~~~~v~~vGD-d~nDl~~l~~~g~ 117 (177)
T d1k1ea_ 74 FFLGKLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPAFAACGT 117 (177)
T ss_dssp EEESCSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred cccccccHHHHHHHHHHHhc------CCcceeEEecC-CccHHHHHhhCCe
Confidence 33456799999999999998 57899999999 9999999999864
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.96 E-value=0.004 Score=58.93 Aligned_cols=61 Identities=15% Similarity=0.162 Sum_probs=40.6
Q ss_pred CeEEEEecCcccCCCCCCCCCC-------Cccc---cccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002314 591 NRLLILGFNATLTEPVDTPGRR-------GDQI---REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~-------~~~~---~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 652 (937)
.|+|+||+||||.+....-... ...+ ......+-|.+.++|+.|.+ .|..++|+|+.+...
T Consensus 5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~-~G~~~~v~S~~~~~~ 75 (164)
T d1u7pa_ 5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS-LGVPVAAASRTSEIQ 75 (164)
T ss_dssp CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHH-TTCCEEEEECCSCHH
T ss_pred CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHH-CCCcEEEEeccccch
Confidence 4899999999998743211000 0000 11234677899999999987 599999999765543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.83 E-value=0.0016 Score=62.76 Aligned_cols=43 Identities=12% Similarity=0.117 Sum_probs=37.3
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
...+..|+.++..+++.++ ++++.+++||| +.||.+||++++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~------~~~~~~i~iGD-s~nDi~m~~~ag~ 179 (210)
T d1j97a_ 137 VLKENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISMFKKAGL 179 (210)
T ss_dssp SCSTTHHHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHHHHHCSE
T ss_pred ccccccccchhhhHHHHhc------ccccceEEecC-CcChHHHHHHCCC
Confidence 3456789999999999988 57899999999 9999999999853
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.77 E-value=0.004 Score=59.19 Aligned_cols=53 Identities=17% Similarity=0.228 Sum_probs=38.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccc-ccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIR-EMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~-~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 648 (937)
+|+||||.||||....... .++. -+...+-|.+.++|++|.+ .|..++|+|..
T Consensus 2 ~K~i~~D~DGtL~~~~~~~----~~~~~~~~~~~~pgv~e~L~~L~~-~g~~l~i~TNq 55 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSD----FQVDRFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQ 55 (161)
T ss_dssp CEEEEECCBTTTBCCC--C----CCCCSGGGCCBCTTHHHHHHHHHH-TTEEEEEEEEC
T ss_pred CcEEEEeCCCCeEeeCCCC----CccCCHHHceECccHHHHHHHHHH-cCCceeeeccc
Confidence 5899999999999753211 0111 0345677899999999987 59999999875
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=94.86 E-value=0.011 Score=56.82 Aligned_cols=52 Identities=10% Similarity=0.099 Sum_probs=40.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
.++||||.||||.....-. .+ .++.++-|.+.++|+.|.+ .|..++|+|..+
T Consensus 2 ~~Av~~DrDGtl~~~~~y~----~~--~~~~~~~~gv~e~l~~L~~-~g~~~~ivTNq~ 53 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYV----HE--IDNFEFIDGVIDAMRELKK-MGFALVVVTNQS 53 (182)
T ss_dssp BCEEEECSBTTTBCCCSSC----CS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECT
T ss_pred CCEEEEeCCCCccCCCCCC----CC--HHHeeECCCHHHHHHHHhh-cCchhhhhhccc
Confidence 4789999999998643211 01 1456778899999999987 599999999976
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=94.55 E-value=0.0053 Score=60.58 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=31.7
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+-|.+.+.|+.|++.++..++|+||.+...+...+..++
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~g 130 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPG 130 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTT
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhc
Confidence 3457889999999875457899999999988888776654
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=94.28 E-value=0.015 Score=56.59 Aligned_cols=39 Identities=18% Similarity=0.342 Sum_probs=32.7
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+-|.+.+.|..|.+ .|..++|+||.+...++..+..++
T Consensus 95 ~l~~~~~~~L~~L~~-~g~~~~i~tn~~~~~~~~~l~~~g 133 (224)
T d2hsza1 95 RLYPNVKETLEALKA-QGYILAVVTNKPTKHVQPILTAFG 133 (224)
T ss_dssp EECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHhc-cCCcccccccccHHHHHHHHHhcC
Confidence 356789999999987 589999999999999888776654
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=94.01 E-value=0.3 Score=50.61 Aligned_cols=101 Identities=11% Similarity=0.048 Sum_probs=62.9
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCc--------cccc--CCceEEECCC-
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVNPW- 512 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~--------~~~l--g~~gllVnP~- 512 (937)
+.+++++.+ ++..||+||..+ |.| +..|+|+|+ .|+|+.-+.+- ++.+ ...|+.+++.
T Consensus 274 i~~~~p~~~---ll~~a~~~v~hg---G~~-t~~Eal~~G----~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~ 342 (391)
T d1pn3a_ 274 VVGEVNLQE---LFGRVAAAIHHD---SAG-TTLLAMRAG----IPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV 342 (391)
T ss_dssp EESSCCHHH---HHTTSSCEEEES---CHH-HHHHHHHHT----CCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSS
T ss_pred EecccCHHH---HHhhccEEEecC---chH-HHHHHHHhC----CcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCC
Confidence 357888655 467899999654 444 678999994 67777655542 2223 1247778775
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHH
Q 002314 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (937)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~ 558 (937)
+.++++++|.++|+.+-.+ +.+++.+.++.....+-++.+.+.
T Consensus 343 ~~~~~l~~~i~~~l~~~~r~---~a~~~a~~~~~~g~~~aa~~i~~~ 386 (391)
T d1pn3a_ 343 PTIDSLSAALDTALAPEIRA---RATTVADTIRADGTTVAAQLLFDA 386 (391)
T ss_dssp CCHHHHHHHHHHHTSTTHHH---HHHHHGGGSCSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCHHHHH---HHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4899999999999754333 333344444444444444433333
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=93.93 E-value=4.5 Score=42.26 Aligned_cols=241 Identities=15% Similarity=0.121 Sum_probs=137.9
Q ss_pred HHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhh--cCCEEEEeCHHHHHHHH
Q 002314 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFV 303 (937)
Q Consensus 226 ~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll--~aDlIgF~t~~~~~~Fl 303 (937)
.+..+| |+|.||.=-.-.++..+.....++||++ +|---.+.++... ..++..|-+. .+|+----+..+.++.+
T Consensus 84 l~~~kP-D~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg~~~~~--~~de~~R~~iskls~~hf~~t~~~~~~L~ 159 (373)
T d1v4va_ 84 LKEMGA-DYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKEP--FPEEANRRLTDVLTDLDFAPTPLAKANLL 159 (373)
T ss_dssp HHHTTC-SEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTSS--TTHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred hhhcCc-ccccccccCccchhHHHHHHHhhhhhee-ecccccccccccC--cchhhhhhhhccccceeeecchhhhhhhh
Confidence 344455 8999987666666666655666899987 3432223333332 2344444322 36666666666666554
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEe-cccChhhhhhhhcCCchHHHHHHHHH-H--h-cCCcEEEEEecccccCCH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFP-IGIDSERFIRALEINPVQVHIKELQE-T--F-AGRKVMLGVDRLDMIKGI 378 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P-~GID~~~f~~~~~~~~~~~~~~~lr~-~--~-~~~~iIL~VdRld~~KGi 378 (937)
+ +|.+ ..+|.++. +++|. +... ..+.+ . . .++.+++..-|....+..
T Consensus 160 ~-----~Ge~-----------~~~I~~vG~p~~D~--i~~~----------~~~~~~~~~~~~~~~~lvt~hr~~n~~~~ 211 (373)
T d1v4va_ 160 K-----EGKR-----------EEGILVTGQTGVDA--VLLA----------AKLGRLPEGLPEGPYVTVTMHRRENWPLL 211 (373)
T ss_dssp T-----TTCC-----------GGGEEECCCHHHHH--HHHH----------HHHCCCCTTCCSSCEEEECCCCGGGGGGH
T ss_pred h-----hccc-----------ccceeecccchhhH--HHhh----------hhhcccccccccccceeEEeccccccchH
Confidence 3 1211 11222221 22332 1110 01100 0 1 245667778888888888
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (937)
...+.++..+.+..++.. ++... +. . +. ....+.+.. . . ...+.+ ...+++.++..+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~----~i~p~-~~--~-~~---~~~~~~~~~---~-~-----~~n~~~-~~~l~~~~~l~ll~ 270 (373)
T d1v4va_ 212 SDLAQALKRVAEAFPHLT----FVYPV-HL--N-PV---VREAVFPVL---K-G-----VRNFVL-LDPLEYGSMAALMR 270 (373)
T ss_dssp HHHHHHHHHHHHHCTTSE----EEEEC-CS--C-HH---HHHHHHHHH---T-T-----CTTEEE-ECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccce----eeeee-cc--c-cc---chhhhhhhh---c-c-----ccccee-eccchHHHHHHHhh
Confidence 999999999888877642 33222 21 1 21 112222221 1 1 124664 57899999999999
Q ss_pred HccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccc-cCCceEEECCCCHHHHHHHHHHHHcCC
Q 002314 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-LGAGAILVNPWNITEVANAIARALNMS 528 (937)
Q Consensus 459 ~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~-lg~~gllVnP~D~~~lA~aI~~aL~m~ 528 (937)
.|++++=.| +-...||.+.+ .|+|.=...|-.+. +..+..++-+.|.+++..+|..+|+.+
T Consensus 271 ~s~~vignS-----ssgi~Ea~~lg----~P~Inir~~~eRqeg~~~g~nvlv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 271 ASLLLVTDS-----GGLQEEGAALG----VPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp TEEEEEESC-----HHHHHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCH
T ss_pred hceeEeccc-----chhhhcchhhc----CcEEEeCCCccCHHHHhcCeeEEcCCCHHHHHHHHHHHHcCH
Confidence 999988776 35567999984 56666555666654 212223334559999999999999854
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.90 E-value=0.016 Score=57.25 Aligned_cols=54 Identities=19% Similarity=0.314 Sum_probs=40.3
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
.+.++||||.||||.....-+. . + .+.++-|.+.++|++|.+ .|..++|+|-.+
T Consensus 21 ~~~~Aif~DrDGtl~~~~~y~~----~-~-~~~~l~pgv~e~L~~L~~-~G~~l~IvTNQ~ 74 (209)
T d2o2xa1 21 PHLPALFLDRDGTINVDTDYPS----D-P-AEIVLRPQMLPAIATANR-AGIPVVVVTNQS 74 (209)
T ss_dssp SSCCCEEECSBTTTBCCCSCTT----C-G-GGCCBCGGGHHHHHHHHH-HTCCEEEEEECH
T ss_pred CCCCEEEEeCCCCeECCCCCCC----C-H-HHeEecccHHHHHHHHHh-hCCeEEEecccc
Confidence 3457899999999986533220 0 1 345678899999999987 599999999753
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=92.75 E-value=0.034 Score=53.58 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=30.7
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+-|.+.++|+.|.+ +..++|+|+.....++..+..++
T Consensus 82 ~~~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l~~~~ 119 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS--ELRLGIVTSQRRNELESGMRSYP 119 (207)
T ss_dssp EECTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHHTTSG
T ss_pred ccccchhhhhhhhcc--ccccccccccccccccccccccc
Confidence 456788999999964 68899999999988888877653
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=92.35 E-value=0.074 Score=51.31 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=33.0
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+-|.+.++|+.|.+ .|..++|+|+.+...++..+...++
T Consensus 88 ~~~pg~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~~~l 127 (218)
T d1te2a_ 88 PLLPGVREAVALCKE-QGLLVGLASASPLHMLEKVLTMFDL 127 (218)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHTTC
T ss_pred cccchHHHHHHHhhh-ccccccccccccccccccccccccc
Confidence 345889999999987 5999999999999988888776543
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.08 E-value=0.037 Score=53.96 Aligned_cols=55 Identities=13% Similarity=0.229 Sum_probs=37.3
Q ss_pred cCCeEEEEecCcccCCCCC-CCCCCCccccccc-cCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 002314 589 SNNRLLILGFNATLTEPVD-TPGRRGDQIREME-LKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~-~P~~~~~~~~~~~-~~~~~~~~~~L~~L~~d~g~~V~IvSGR 648 (937)
.+.|+++||.||||..... .+ ... ...+ ..+.+.+.++|+.|.+ .|..++|+|--
T Consensus 19 ~~~Kia~fDrDGtLik~~~~~~---~~~-~~~d~~~l~~~v~~~i~~L~~-~gy~iiIvTNQ 75 (195)
T d1yj5a1 19 PQGKVAAFDLDGTLITTRSGKV---FPT-SPSDWRILYPEIPKKLQELAA-EGYKLVIFTNQ 75 (195)
T ss_dssp CCSCEEEECSBTTTEECSSSCS---SCS-STTCCEESCTTHHHHHHHHHH-HTCEEEEEEEC
T ss_pred CcCcEEEEECCCceEeeCCCCc---CCC-ChhhceeccCCHHHHHHHHHh-CCcEEEEecCc
Confidence 4568899999999975321 00 000 0012 2257899999999987 48999999874
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=91.09 E-value=0.097 Score=50.01 Aligned_cols=69 Identities=20% Similarity=0.260 Sum_probs=46.4
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+.|+|+||+||+|++-.-- .+.--+.....+..--.+|..|.. .++.++++||+....+......+++
T Consensus 3 ~~ik~~i~DvDGVlTDG~v~----~~~dG~e~k~F~~~Dg~gi~~l~~-~gi~~~iis~~~~~~v~~~~~~l~~ 71 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQLH----YDANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGI 71 (177)
T ss_dssp GGCCEEEEECTTTTSCSEEE----EETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTC
T ss_pred ccCeEEEEccCCcccCCeEE----EeCCCCEEEEEECcchHHHHHHhh-hcEEEEEecCCchhHHHHHHhhhcc
Confidence 46799999999999974100 000000112233444557888876 5999999999999999888877654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=89.66 E-value=0.11 Score=51.65 Aligned_cols=38 Identities=18% Similarity=0.165 Sum_probs=27.4
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
.+-+.+.++|+.|.+ .|..++|+||.+...++..+..+
T Consensus 99 ~~~~g~~~~L~~Lk~-~g~~i~i~Tn~~~~~~~~~l~~~ 136 (257)
T d1swva_ 99 SPINGVKEVIASLRE-RGIKIGSTTGYTREMMDIVAKEA 136 (257)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHh-cccceeecCCCchhhHHHHHHHH
Confidence 456777788888876 37888888888777776666543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=88.82 E-value=0.13 Score=48.93 Aligned_cols=36 Identities=17% Similarity=0.052 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
|...++.++++++ ++++.+++||| ..+|..+-+.++
T Consensus 139 ~~~~~~~~~~~~~------~~p~~~l~VgD-~~~Di~~A~~~G 174 (204)
T d2go7a1 139 SPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEFAQNSG 174 (204)
T ss_dssp SSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhC------CCCceEEEEeC-CHHHHHHHHHcC
Confidence 4556677778887 57899999999 888887766654
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=88.68 E-value=0.38 Score=46.32 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=28.7
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
+-|.+.+.|.+|.+ .|.+++|+|+.+.......+...
T Consensus 128 ~~pg~~e~l~~L~~-~g~~l~i~Tn~~~~~~~~~~~~~ 164 (253)
T d1zs9a1 128 FFADVVPAVRKWRE-AGMKVYIYSSGSVEAQKLLFGHS 164 (253)
T ss_dssp CCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHTB
T ss_pred cCCCHHHHHHHHhh-ccCceeecCCCcHHHHHHHHHHc
Confidence 44778888999876 58999999999888777666543
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.57 E-value=0.37 Score=43.64 Aligned_cols=57 Identities=19% Similarity=0.228 Sum_probs=46.6
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
..+++|.+||++---.+| +.+++.++|+.|.+ .|..++++||........+-..+++
T Consensus 4 ~~~~~d~~~~~~~g~~D~-------------lr~~a~~~I~~L~~-~Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 4 TAVIFDKTGTLTKGKPDT-------------LKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CEEEEECCCCCBCSCCCC-------------BCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEECCceEEEEecCCC-------------CCccHHHHHHHHHH-cCCEEEEEcCcchhhhhHHHhhhhh
Confidence 578999999998543333 66789999999987 5999999999999999887777654
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.42 E-value=0.25 Score=48.39 Aligned_cols=37 Identities=22% Similarity=0.366 Sum_probs=28.3
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
.+.|.+.++|++|.+ +..++|+|+-+...+...+...
T Consensus 109 ~~~~~~~~~L~~L~~--~~~l~i~Tn~~~~~~~~~l~~~ 145 (247)
T d2gfha1 109 ILADDVKAMLTELRK--EVRLLLLTNGDRQTQREKIEAC 145 (247)
T ss_dssp CCCHHHHHHHHHHHT--TSEEEEEECSCHHHHHHHHHHH
T ss_pred ccCccHHHHHHHhhc--ccceEEeecccchhhhhhhhhc
Confidence 566788889999864 7889999988877776666554
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=88.16 E-value=0.25 Score=46.57 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=28.3
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+-+.+.+.|++|.+ .|..++|+|+.+...++ .+..++
T Consensus 79 ~~~~gv~~~l~~l~~-~g~~~~i~Sn~~~~~~~-~l~~~~ 116 (187)
T d2fi1a1 79 ILFEGVSDLLEDISN-QGGRHFLVSHRNDQVLE-ILEKTS 116 (187)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCTHHHH-HHHHTT
T ss_pred cccchhHHHHHHHHh-hhccccccccCccchhh-hhhhhc
Confidence 445788999999987 48999999998765554 455543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.97 E-value=0.083 Score=50.04 Aligned_cols=16 Identities=25% Similarity=0.683 Sum_probs=14.4
Q ss_pred CCeEEEEecCcccCCC
Q 002314 590 NNRLLILGFNATLTEP 605 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (937)
++||++||+||||++.
T Consensus 3 kkKlv~FDlDGTL~d~ 18 (210)
T d1j97a_ 3 KKKLILFDFDSTLVNN 18 (210)
T ss_dssp CCCEEEECCCCCCBSS
T ss_pred CCeEEEEeCCCCcCCc
Confidence 5799999999999975
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=86.95 E-value=25 Score=40.23 Aligned_cols=147 Identities=10% Similarity=0.080 Sum_probs=98.9
Q ss_pred CCcEEEEEecccccCCHHHHHHH----HHHhHHhCcCc-cCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLA----FEKFLEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~A----f~~ll~~~P~~-~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~ 436 (937)
+..+++++=|+..-|--...+.- +.++. +.|+. ...+++|..|....++... +++-+.|.+++.-||.-=...
T Consensus 549 ~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk-~~~~~~~~P~q~IFaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~ 626 (824)
T d2gj4a1 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIK-KEPNKFVVPRTVMIGGKAAPGYHMA-KMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHH-HCTTSCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHTTCTTTG
T ss_pred chhhhhheeechhhhhhhhhHhhHHHHHHHhh-hcccCCCCCeEEEEeCCCCCccHHH-HHHHHHHHHHHHHHhcChhhc
Confidence 45678899999988887664433 34443 34432 2257788777665555433 355566777777677421122
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-----CCceEEE
Q 002314 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILV 509 (937)
Q Consensus 437 ~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-----g~~gllV 509 (937)
+...|+|+ ...+-.--..++.+|||.+.+|+ .|.=|.--+=||.- |++-+|..=|+--++ +++++++
T Consensus 627 ~~lkVvFl-enY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN-----Gal~lstlDGwnvEi~~~vg~~N~~~f 700 (824)
T d2gj4a1 627 DRLRVIFL-ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIF 700 (824)
T ss_dssp GGEEEEEE-TTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred cceeEEEc-CCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHc-----CCeeeccccchHHHHHHhcCcccEEEe
Confidence 23468875 45677777889999999999998 58888888888774 899999988986443 4678887
Q ss_pred CCCCHHHH
Q 002314 510 NPWNITEV 517 (937)
Q Consensus 510 nP~D~~~l 517 (937)
-. +.+++
T Consensus 701 G~-~~~ev 707 (824)
T d2gj4a1 701 GM-RVEDV 707 (824)
T ss_dssp SC-CHHHH
T ss_pred CC-Chhhh
Confidence 43 34443
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=86.16 E-value=0.18 Score=49.22 Aligned_cols=70 Identities=10% Similarity=0.043 Sum_probs=49.2
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCC---------CCCCCCccc------------cccccCCChhHHHHHHHhhc
Q 002314 578 READSIERYLRSNNRLLILGFNATLTEPVD---------TPGRRGDQI------------REMELKLHPDLKQPLNALCH 636 (937)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~---------~P~~~~~~~------------~~~~~~~~~~~~~~L~~L~~ 636 (937)
.+.++.+.+...+...|+||+|-|+++..+ .|+.. +.+ -+..+.+-|.+++.|+.+.+
T Consensus 22 ~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~-~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~ 100 (209)
T d2b82a1 22 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESE-DYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR 100 (209)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSS-GGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH
T ss_pred EHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcc-cccCCCcchHHHhcccccccCcchhHHHHHHHHHH
Confidence 466777777777777999999999998632 11000 000 01234566789999999987
Q ss_pred CCCCeEEEEcCCC
Q 002314 637 DPKTTIVVLSGSD 649 (937)
Q Consensus 637 d~g~~V~IvSGR~ 649 (937)
.|.+|+.||||+
T Consensus 101 -~Gv~IfyVTnR~ 112 (209)
T d2b82a1 101 -RGDAIFFVTGRS 112 (209)
T ss_dssp -HTCEEEEEECSC
T ss_pred -cCCeEEEEeCCc
Confidence 699999999997
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=85.20 E-value=1.3 Score=45.28 Aligned_cols=90 Identities=14% Similarity=0.071 Sum_probs=57.5
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECCC--
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (937)
++ +.+++++.+ +|..+|+|| .-|-..++.|+++++ .|+|+--+.+ -+..+ ...|+.+++.
T Consensus 287 v~-~~~~~p~~~---~l~~~~~~V----~hgG~~t~~Eal~~G----vP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~ 354 (401)
T d1iira_ 287 CF-AIGEVNHQV---LFGRVAAVI----HHGGAGTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (401)
T ss_dssp EE-ECSSCCHHH---HGGGSSEEE----ECCCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EEeccCHHH---HHhhcCEEE----ecCCchHHHHHHHhC----CCEEEccccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 55 477887654 567899998 345666678999994 5666654443 22222 1247778765
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhc
Q 002314 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTT 545 (937)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~ 545 (937)
++++++++|.++|+ ++ -+++.+++.+.++.
T Consensus 355 ~~~~l~~ai~~~l~--~~-~~~~a~~~~~~~~~ 384 (401)
T d1iira_ 355 TFDSLSAALATALT--PE-THARATAVAGTIRT 384 (401)
T ss_dssp CHHHHHHHHHHHTS--HH-HHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHhC--HH-HHHHHHHHHHHHHh
Confidence 68999999999996 22 23344444444444
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=85.02 E-value=11 Score=43.20 Aligned_cols=148 Identities=16% Similarity=0.142 Sum_probs=101.3
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHh---HHhCcCc-cCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLAFEKF---LEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~Af~~l---l~~~P~~-~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
+..++.++=|+..-|--...+.-..++ +...|.. +..+++|..|....++... +++-+.|.+++..||..=-..+
T Consensus 525 ~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~~ 603 (796)
T d1l5wa_ 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHHTCTTTGG
T ss_pred hhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHH-HHHHHHHHHHHHHhcCChhhcc
Confidence 456788999999999877766555443 3344432 2247788777666555433 4566677777777774100111
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-----CCceEEEC
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-----g~~gllVn 510 (937)
...|+|+ ...+-+--..+...|||.+.+|. .|.-|..-+=|+.- |++.+|..-|.--++ +++|+++-
T Consensus 604 ~~kVVFl-enYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN-----G~lnlstlDGw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 604 KLKVVFL-PDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEEC-SSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceeEEEe-CCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHc-----CCeeeecccchHHHHHHhcCccceEEec
Confidence 2357765 56677777889999999999998 58888888888874 899999999986553 57888884
Q ss_pred CCCHHHH
Q 002314 511 PWNITEV 517 (937)
Q Consensus 511 P~D~~~l 517 (937)
. +.+++
T Consensus 678 ~-~~~ev 683 (796)
T d1l5wa_ 678 H-TVEQV 683 (796)
T ss_dssp C-CHHHH
T ss_pred C-chHHH
Confidence 3 44444
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=83.16 E-value=0.8 Score=42.88 Aligned_cols=56 Identities=9% Similarity=0.144 Sum_probs=45.4
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
-++++|.+|||+-..-+| +-+++.++|+.|.+ .|+.|+++||=........-..++
T Consensus 3 ~~~~~d~~~~~~~~~~Dp-------------~R~~~~~~I~~l~~-~GI~v~miTGD~~~tA~~ia~~~G 58 (168)
T d1wpga2 3 SVICSDKTGTLTTNQLDP-------------PRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIG 58 (168)
T ss_dssp CEEEECCTTTTBCCCECC-------------BCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTT
T ss_pred EEEEECCccEEEEEecCC-------------CchhHHHHHHHHHH-CcCEEEEECCCCHHHHHHHHHHcC
Confidence 367889999999664344 56789999999987 599999999999988887776654
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=82.83 E-value=1.1 Score=46.11 Aligned_cols=101 Identities=14% Similarity=0.041 Sum_probs=64.1
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc--CCceEEECCC--
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (937)
|+ +.+++++.++ +..+|+||. .|-..+..||++++ .|+|+.-+.+ .+..+ ...|+.+++.
T Consensus 288 v~-~~~~~p~~~l---l~~~~~~I~----hgG~~t~~Eal~~G----vP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~ 355 (401)
T d1rrva_ 288 CF-AIDEVNFQAL---FRRVAAVIH----HGSAGTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (401)
T ss_dssp EE-EESSCCHHHH---GGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred EE-EEeccCcHHH---hhhccEEEe----cCCchHHHHHHHhC----CCEEEecccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 54 4678887655 567999984 45556679999994 5666665554 22222 1247888875
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHH
Q 002314 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (937)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl 556 (937)
+.+.++++|.++|+ + +.+++.++..+.+.......=++.++
T Consensus 356 ~~~~L~~ai~~vl~--~-~~r~~a~~~~~~~~~~g~~~aa~~ie 396 (401)
T d1rrva_ 356 TFESLSAALTTVLA--P-ETRARAEAVAGMVLTDGAAAAADLVL 396 (401)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 58999999999995 3 33444555555555545444444333
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.14 E-value=0.77 Score=43.53 Aligned_cols=30 Identities=10% Similarity=0.209 Sum_probs=23.6
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCh
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 650 (937)
..|-+.++++|++|.+..+..|.|+|.|+.
T Consensus 73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~ 102 (195)
T d1q92a_ 73 LEPLPGAVEAVKEMASLQNTDVFICTSPIK 102 (195)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCS
T ss_pred CCcccCHHHHHHHHhhccCccceEEccccc
Confidence 356688999999998755567889999863
|