Citrus Sinensis ID: 002325

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930------
Protein Sequence
MSMEVSPTALEGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSVKHGSYSSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGEFIKVA
Secondary Structure (PSIPRED)
ccccccHHHHccccccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccEEcHHHHHccEEEEcccEEEccccEEEEccccccccccHHHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEcccccccccccHHHHccHHHHccccHHHHHcHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccEcccccHHHccccEcccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHccccccccccccccccccccccccEEEEcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHcccEEEEc
Coil and Loop (DISEMBL)
msmevsptalegscgvvngsvcavgdesvmidnnveenenpanlvedfdsywddindrltiSRMVSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLyhvgaeesepfqslvmkhesgsvkhgsysslsdydkigesvggLKNVAKEQLKNLRKEIDRikgcsslrrigsgsemvglggilqdkvsdiRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCdqsaqfydneslnWLGKIKEISSLREELNAISKSLSvseighltshgsiemgeewdtnkwtdhlhrktssnhvgvstspsegngkhdeSIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKErgsslpikkdkeFDILRKKIPEVLSKLDDILVeneklpafsenaeGLCNFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQgalddahiEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSdaahnatplaEENLVKRIGNLqgalddanieaSISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFsdaahnatpgstcafedcdmeSVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGEFIKVA
Flexible Loop (DISEMBL)
msmevsptalegscgvvNGSVCAVGDESVMIDNNVEENENPANLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSVKHGSYSSLSDYDKIGESVGGLKNVAKEQLKNLrkeidrikgcsslrrigsgsemvglggilqdkvsdiRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSaqfydneslnWLGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTssnhvgvstspsegngkhDESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLkergsslpikkdkefdilrKKIPEVLSKLDDILVENEKlpafsenaeGLCNFKDRLESLLLENRQLRslltdkknevkrlslkvsdtaeiMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLlsslveekenLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFrldslssqskrlilkanvitrtglsykqklERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGEFIKVA
Low Complexity Region (SEG)
MSMEVSPTALEGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNaieqeaaekiaekelelVRLRESLHLYHVGAEESEPFQSLVMKHESGSVKHGSYSSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDrleslllenrqlrsllTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATlleekdlskslsqelsHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGEFIKVA
Disordered region (IsUnstruct)
************SCGVVNGSVCAVGDESVMIDNNV*****PANLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVG**************************************************LRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAI*****V*EIGHL***********WD***W***********************************************************MKRIHELKVTEMTEDLFALKREYLK*******IKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLT*******RLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRL****************************************************************************DALEQIEQYKLEVHDLKQKLEL*************KQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGEF****
Disordered Region (DISOPRED)
********************************************VEDFDSYWDDINDRLTISRMVSD***************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************GDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSG******
Disordered Region (DISEMBL)
**********EGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMK***********SSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLH********************HDESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATLLEEKDLSK***************QQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGEFIKVA
Disordered Region (DISPRO)
****VSP*ALEGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSVKHGSYSSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLS****************************************************SIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGEFIKVA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSMEVSPTALEGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIxxxxxxxxxxxxxxxxxxxxxLHLYHVGAEESEPFQSLVMKHESGSVKHGSYSSLSDYDKIGESVGGLxxxxxxxxxxxxxxxxxxxxxSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRxxxxxxxxxxxxxxxxxxxxxxxxxxxxVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAVATxxxxxxxxxxxxxxxxxxxxxTSRQQILISKSSKExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDxxxxxxxxxxxxxxxxxxxxxLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGEFIKVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	936	2.2.26 [Sep-21-2011]
Q5BQN5	834	WPP domain-associated pro	N/A	no	0.830	0.931	0.391	1e-142
O64584	825	WPP domain-associated pro	yes	no	0.829	0.940	0.378	1e-128

>sp|Q5BQN5|WAP_SOLLC WPP domain-associated protein (Fragment) OS=Solanum lycopersicum GN=WAP PE=1 SV=1

 Score =  508 bits (1307), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 365/932 (39%), Positives = 520/932 (55%), Gaps = 155/932 (16%)

Query: 37  ENENPAN-LVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIEQEAAEKIAEKELELVRL 95
           ENEN  + ++EDF++YW+D+NDRL +SRMVSDSVIKG+V+A+EQEAAE++  K++EL  L
Sbjct: 1   ENENLGDEILEDFETYWEDVNDRLMVSRMVSDSVIKGIVSAVEQEAAERLVTKDMELANL 60

Query: 96  RESLHLYHVGAEESE--PFQSLVMKHESGSVKHGSYSSLSD----YDKIGESVGGLKNVA 149
           +E L  +  G  ++E   F SL+ ++E  S+      +LSD    + K+GE + GL+++A
Sbjct: 61  KEYLQFHEGGLSKTELESFGSLMSQNELESMDFRKCMTLSDVFMEHGKMGEFLDGLRSLA 120

Query: 150 KEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALDSLRTTLD 209
           K++ K L+K ID ++G +S+    S SEM  L GILQ+K S I W+ +DK LD++R  +D
Sbjct: 121 KDEFKKLKKSIDELRGSNSVSNKISRSEMAKLEGILQEKESGI-WVQLDKTLDNIRMMVD 179

Query: 210 TIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYD- 268
           T+F   D  + LSK SL  WQ+E   + E+E MV+    R+++EEFE +L DQ AQ    
Sbjct: 180 TVFKRMDVMLQLSKTSLHHWQEEHLIKVELESMVMQCVIRTVQEEFEYKLWDQYAQLCGD 239

Query: 269 -NESLNWLGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRK 327
            NE LN       ISSLR EL+A+ KSLS SE GH+TSHGS +           D   RK
Sbjct: 240 RNEKLN------AISSLRTELDAVLKSLSSSENGHVTSHGSHD----------ADFFTRK 283

Query: 328 TSSNHVGVSTSPSEGNGKHDESIIVMSENLDS-NLKHMSKEELVNHFKAEMTKMKRIHEL 386
            SS +V  + S  +GNGK ++S   + EN D+  LKHMSK+E+V +F   MTKMKR HE 
Sbjct: 284 KSSEYVTSTKSVWDGNGKLEDSKTDIPENFDAVTLKHMSKDEMVTYFNNIMTKMKRHHES 343

Query: 387 KVTEMTEDLFALKREYLKERGSSL-PIKKDK-EFDILRKKIPEVLSKLDDILVENEKLPA 444
            + + T++ F L+ EYL  RG S+ P KKDK E DILRKKIPE++ KLDDI         
Sbjct: 344 ILQKKTDEYFVLRAEYLNLRGGSVVPHKKDKGESDILRKKIPEIIFKLDDI--------- 394

Query: 445 FSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENL 504
                             L+EN +                             + T+E L
Sbjct: 395 ------------------LVENEK---------------------------HPAFTQETL 409

Query: 505 VKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSD 564
               GNL+  LD+              LL E       V +K +    L+ +V +     
Sbjct: 410 --SFGNLKDRLDN--------------LLSENHQLRDLVKEKKNEVKSLLSQVSDATEKR 453

Query: 565 AAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEY 624
             H+   LAE  ++K+IG L  A++++ I  S+ E VY C LR+     ++  E+ +L +
Sbjct: 454 LQHS---LAEAGMLKQIGELNLAMEESLIGGSVREDVYTCFLRDLSGGARNEVEELNLGF 510

Query: 625 ELMQEVYGIIFSDAAHNATPGST--CAFEDCDMESVIMQDLYEVIFREALKEAEVKLNEL 682
            ++ E         +++ + GST     ED +ME +IMQ++  VI  E +KEA+  L EL
Sbjct: 511 NMINE---------SNDTSAGSTRKIEIEDLEMECLIMQEICGVISGEGIKEAKDMLKEL 561

Query: 683 NQKYFMETELR--------------RLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATL 728
             ++  E E+R              + EV EK++L Q    +  LV EKE L ++A A L
Sbjct: 562 YLEHLNEKEIRTSLDTKLIEMENKLKFEVEEKDRLMQ----MEKLVNEKEKLATDASAAL 617

Query: 729 LEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDL- 787
            +E+  S+ + QEL+  ++  S+QQ L S  +KE N +KG L +A+E+IE  K EV  L 
Sbjct: 618 AKERVQSEQVRQELNAAKEFASQQQTLASGCNKEVNVIKGQLAEAVERIEVLKEEVAQLN 677

Query: 788 ---------------KQKLELAMKELRDT------NEET--RKQVQLLVIFIQGLSKTVA 824
                          +  + LA+ E R T      ++E   RKQV+ ++  I   SK +A
Sbjct: 678 ISLEEKTEELKEANHRANMVLAISEERQTLLSSLESKEIALRKQVEKIIGNINESSKMIA 737

Query: 825 DFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVD 884
           DFECR    ++  N R +   SQ   L+ KAN++ RT L Y+Q+LE+RCSDL+ AEAEVD
Sbjct: 738 DFECRVTGRLKTNNARFEHSFSQMDCLVKKANLLRRTTLLYQQRLEKRCSDLKLAEAEVD 797

Query: 885 LLGDEVDTLSGLLEKIYIALDHYSSVLQHYPG 916
           LLGDEVDTL  L+EKIYIALDHYS VLQHYPG
Sbjct: 798 LLGDEVDTLLSLVEKIYIALDHYSPVLQHYPG 829

Solanum lycopersicum (taxid: 4081)

>sp|O64584|WAP_ARATH WPP domain-associated protein OS=Arabidopsis thaliana GN=WAP PE=1 SV=2

 Score =  461 bits (1187), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 350/925 (37%), Positives = 502/925 (54%), Gaps = 149/925 (16%)

Query: 28  SVMIDNNVEENENP-ANLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIEQEAAEKIA 86
           S+ ++  ++ENENP  + +ED DSYW+DINDRLTISR+VSDS+I+GMV AIE +AAEKIA
Sbjct: 23  SLQVNGVLKENENPDVDFLEDLDSYWEDINDRLTISRVVSDSIIRGMVTAIESDAAEKIA 82

Query: 87  EKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSVKHGSYSSLSDYDKIGESVGGLK 146
           +K+LEL ++RE+L LYHVG+EE+E  +S ++  E   +  GS SS             LK
Sbjct: 83  QKDLELSKIRETLLLYHVGSEENESSESRLIHDE---LTQGSSSS-------------LK 126

Query: 147 NVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALDSLRT 206
             A++QL  L +E+  ++    +   GSG+ +    G L     + R   VDK LDSL++
Sbjct: 127 KKARKQLLMLVEELTNLREYIHIN--GSGATVDDSLG-LDSSPHETRSKTVDKMLDSLKS 183

Query: 207 TLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQF 266
            L+T+    ++    S      WQQE +FQ EIE  V+ +  RSLK+E+E+RL DQ A+F
Sbjct: 184 ILETVLKRKNDMELPS-----SWQQEHDFQKEIESAVVTSVLRSLKDEYEQRLLDQKAEF 238

Query: 267 YDNESLNWLGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHR 326
             N SL  LG IKEI+ LR+EL AI KS    E G        E GE  D  K  + LHR
Sbjct: 239 GGNRSL-ILGNIKEITGLRQELEAIRKSFLDHENGD-------EAGEVGD-RKRVEQLHR 289

Query: 327 KTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHEL 386
           K S +   VS+     NGKH+ES   +    +  L+HMS +E++NHFK EM KMKR H+ 
Sbjct: 290 KMSGSLNSVSSVWE--NGKHEESSTGLIPEHNETLRHMSPDEMINHFKIEMNKMKRDHDY 347

Query: 387 KVTEMTEDLFALKREYLK--ERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPA 444
           K+ E+TE  F  KR+YL   ERGS   + KDKE   L+KKIP V+SKLD IL+E+EK  +
Sbjct: 348 KIQELTEQCFTFKRKYLNLTERGSFSFVGKDKELGALKKKIPFVISKLDKILMEDEKFVS 407

Query: 445 FSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENL 504
             +N  GL   K +L+SLLLENRQL+  L              SD AE M Q S  E + 
Sbjct: 408 EGKNDAGL---KRQLDSLLLENRQLKDSL--------------SDAAEKMSQLSQAEADH 450

Query: 505 VKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSD 564
            + I  L+  ++D+  EASI E VY C + E    IK   +++DLE+ +++E YE++  D
Sbjct: 451 QELIRKLETDVEDSRNEASIYEDVYGCFVTEFVGQIKCTKQETDLEHSMLREAYELLLED 510

Query: 565 AAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEY 624
            A      ++E+            +D+            C        +KSV        
Sbjct: 511 LARKEARKSKED-----------FEDS------------C--------VKSV-------- 531

Query: 625 ELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQ 684
            +M+E   +I+ +A   A                  + + E+      KE  ++ +E+  
Sbjct: 532 -MMEECCSVIYKEAVKEA-----------------HKKIVELNLHVTEKEGTLR-SEMVD 572

Query: 685 KYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSH 744
           K  ++ E+ RL                 LV+EKENLV  A   L  E+   + +SQ+++ 
Sbjct: 573 KERLKEEIHRL---------------GCLVKEKENLVQTAENNLATERKKIEVVSQQIND 617

Query: 745 LRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEE 804
           L+ +  RQ+  I    +  + +       LE+++ Y+ ++  L+++LELA + L++  +E
Sbjct: 618 LQSQVERQETEIQDKIEALSVVSAR---ELEKVKGYETKISSLREELELARESLKEMKDE 674

Query: 805 TRKQ------------------VQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSS 846
            RK                   V L ++    L K     E       ++ N RL ++ S
Sbjct: 675 KRKTEEKLSETKAEKETLKKQLVSLDLVVPPQLIKGFDILEGLIAEKTQKTNSRLKNMQS 734

Query: 847 QSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDH 906
           Q   L  + N +     +YKQ+LE++C DL+KAEAEVDLLGDEV+TL  LLEKIYIALDH
Sbjct: 735 QLSDLSHQINEVKGKASTYKQRLEKKCCDLKKAEAEVDLLGDEVETLLDLLEKIYIALDH 794

Query: 907 YSSVLQHYPGIMEILRLVRRELSGE 931
           YS +L+HYPGI+EILRLVRRELSGE
Sbjct: 795 YSPILKHYPGIIEILRLVRRELSGE 819

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	936
225444055	902	PREDICTED: WPP domain-associated protein	0.911	0.945	0.506	0.0
255564381	903	Early endosome antigen, putative [Ricinu	0.904	0.937	0.467	0.0
147794011	1539	hypothetical protein VITISV_036942 [Viti	0.868	0.528	0.473	0.0
224056843	848	predicted protein [Populus trichocarpa]	0.866	0.956	0.441	1e-178
449434230	881	PREDICTED: WPP domain-associated protein	0.863	0.917	0.421	1e-163
356558063	854	PREDICTED: WPP domain-associated protein	0.892	0.977	0.412	1e-158
224122344	660	predicted protein [Populus trichocarpa]	0.678	0.962	0.468	1e-156
449490740	852	PREDICTED: WPP domain-associated protein	0.832	0.914	0.409	1e-156
297740840	807	unnamed protein product [Vitis vinifera]	0.495	0.574	0.584	1e-146
357448517	866	WPP domain-associated protein [Medicago	0.871	0.942	0.392	1e-141

>gi|225444055|ref|XP_002264075.1| PREDICTED: WPP domain-associated protein-like [Vitis vinifera]

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/974 (50%), Positives = 638/974 (65%), Gaps = 121/974 (12%)

Query: 6   SPTALEGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFD-SYWDDINDRLTISRM 64
           SP  LE S  V + SV + GDESV + N+V+ +EN  + + +   SY +DINDRLTISRM
Sbjct: 3   SPEILE-SIRVSDASVSSCGDESVQLSNSVKGSENLGDDLLEDLDSYLEDINDRLTISRM 61

Query: 65  VSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSV 124
           VS+SVIKGMVNA+ QEA EKIA K LE+  L+E+LH  HV A+E++PF+SL+  HE+ + 
Sbjct: 62  VSNSVIKGMVNAVAQEANEKIAMKNLEVAGLKEALHFCHVDADETDPFRSLINFHEAKNK 121

Query: 125 K----HGSYSSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVG 180
           K        ++L+++D++ ES+G LK+ A+EQ K L+KEI  I+G S +RRI S SE VG
Sbjct: 122 KCRSASSLLAALAEHDRLRESLGNLKSSAREQFKKLQKEISGIRGSSPMRRINSSSE-VG 180

Query: 181 LGGILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIE 240
           L GILQ+K S+ +W DVDK +D+L TTLDT++   +N VYLSKAS+ +W Q+ EFQGEIE
Sbjct: 181 LCGILQEKASE-KWTDVDKTIDTLMTTLDTVYEQVNNIVYLSKASVSEWLQDWEFQGEIE 239

Query: 241 DMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEI 300
            MVI +  RSL+EEFEERL +Q+A F  N S+ W  K KEIS LR+EL+AISK LS SE 
Sbjct: 240 AMVIEHSIRSLREEFEERLWNQNAHFCGNGSVYWPEKTKEISRLRQELDAISKMLSTSEF 299

Query: 301 GHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSN 360
           G L SHGS E+GEEW+  K TDH HRK  SNHV  +TS  EGNGKH+ES   M ENL+S+
Sbjct: 300 GQLISHGSCEIGEEWNNTKGTDHFHRKVLSNHVSPATSVWEGNGKHEESKTSMPENLESS 359

Query: 361 --LKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEF 418
             LKHMSKEEL NHFK EMTKM+R HE +V EM E   +LK ++LKERGSSLP++KDKEF
Sbjct: 360 SLLKHMSKEELFNHFKTEMTKMRRNHESQVQEMAEQYISLKGKFLKERGSSLPLRKDKEF 419

Query: 419 DILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKN 478
           D +RKKIPEV+ KLDDILVENEKLPAFS NAE L + KDRL++LL EN QLR  LTD+K 
Sbjct: 420 DAMRKKIPEVILKLDDILVENEKLPAFSNNAESLGSLKDRLDTLLSENHQLRDSLTDRKK 479

Query: 479 EVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAAD 538
           EV+ LS ++S  AE M Q SL E  L+K IGNL+ A++DA IEASI+E V KC+L E  +
Sbjct: 480 EVRYLSTQLSVAAEKMSQHSLAEAKLLKIIGNLKSAIEDAKIEASISEDVNKCILSEVTN 539

Query: 539 FIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASIS 598
            IK  +++S++E  LMQ++YE+I  +AA NA   ++  +                     
Sbjct: 540 QIKCDTEESNMESTLMQQIYEVILREAAQNAETTSKYEI--------------------- 578

Query: 599 EGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESV 658
                              E SD+E+ +MQ +  II+                       
Sbjct: 579 -------------------EDSDMEFIIMQGLSAIIY----------------------- 596

Query: 659 IMQDLYEVIFREALKEAEVKLNELNQKYFMETELR--------------RLEVAEKEKLK 704
                     RE +K+AE KLN +N KY    E R              RLE  EKE+LK
Sbjct: 597 ----------REVMKDAEAKLNIMNVKYDCANEARVSIEIKVVEKEKALRLEFDEKERLK 646

Query: 705 QETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFN 764
           QE  LL + +EEKE    E    L++EK+  +  SQEL++LR+ T++QQ LIS+SS+E +
Sbjct: 647 QEIILLEASLEEKERSALEIADALVKEKEQFELASQELNNLREHTNQQQKLISESSREAD 706

Query: 765 DLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETR------------------ 806
             KGNL +ALEQI+  K+E+ +LKQKLE+  KEL +T+E+ R                  
Sbjct: 707 ITKGNLVEALEQIDLQKVEICELKQKLEITRKELGETDEQRRMLLAVARETQNALSLVEA 766

Query: 807 ------KQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITR 860
                 KQ++ +++F+ GLSK +A+FE R   DI+R +FRL+  +SQ   LI KAN++ R
Sbjct: 767 REREHSKQMESIIVFMNGLSKVMAEFEGRVEKDIKRNSFRLEHANSQLTPLIQKANILRR 826

Query: 861 TGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEI 920
           T L YKQ+LERR SDLQKAE EVDLLGDEVD L  LLEKIYIALDHYS +LQHYPG++EI
Sbjct: 827 TSLRYKQRLERRYSDLQKAETEVDLLGDEVDALLSLLEKIYIALDHYSPILQHYPGVIEI 886

Query: 921 LRLVRRELSGEFIK 934
           L+LVRRELS E  K
Sbjct: 887 LKLVRRELSAESTK 900

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564381|ref|XP_002523187.1| Early endosome antigen, putative [Ricinus communis] gi|223537594|gb|EEF39218.1| Early endosome antigen, putative [Ricinus communis]

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/975 (46%), Positives = 608/975 (62%), Gaps = 128/975 (13%)

Query: 6   SPTALEGSCGVVNGSVCAVGDESVMIDNNVEENEN-PANLVEDFDSYWDDINDRLTISRM 64
           S T+++ S    NG +   GD        VEE+ N   + + D DSYW+DI DRLT+SRM
Sbjct: 9   SSTSMDASVSSCNGGMQQYGD-------YVEESGNLDVDFLNDLDSYWEDIRDRLTVSRM 61

Query: 65  VSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSV 124
           VSDSVIKG+V A+EQEAAEKIA+KELE+ RL+E+LHLYHVG + +EP   L M +E   +
Sbjct: 62  VSDSVIKGIVCAVEQEAAEKIAQKELEIARLKETLHLYHVGIDCNEPMGHLNMFNELKIM 121

Query: 125 KHGSYSSLSDY----DKIGESVGGLKNVAKEQLKNLRKEI----------------DRIK 164
           K+  + + SDY    +++ +S+  L   AKEQ K L+KEI                ++ K
Sbjct: 122 KNVLHYTDSDYFLEHERLQDSLHDLIFAAKEQFKKLKKEIEKHKWSEIDKMKGSEINKFK 181

Query: 165 GCSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKA 224
           G  S+RR GSGS++ GL GIL++ + D +W+DVD+ LD LRT+L++I+   +  V LSK+
Sbjct: 182 GSGSIRRNGSGSQLWGLSGILEEDMPD-KWIDVDRTLDGLRTSLESIYAQTEKGVCLSKS 240

Query: 225 SLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSL 284
            L  WQ+++EFQ EIE  V+ NC RSL+E+FE+RL DQ++Q   NES   L KIKE+SSL
Sbjct: 241 LLSDWQKDREFQAEIEGSVMTNCIRSLQEQFEQRLWDQNSQSCGNESAQCLEKIKELSSL 300

Query: 285 REELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNG 344
            +EL+AISKSLSV E G L SHGS+E              HRK SSNHV  S S  EGNG
Sbjct: 301 CQELDAISKSLSVPENGQLISHGSLE--------------HRKASSNHVS-SASHWEGNG 345

Query: 345 KHDESIIVMSENLD-SNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYL 403
           KHDESIIV+ ENLD + LKH +K+EL N+FKAEMTKMKR +ELK  EMTE+ F LKREYL
Sbjct: 346 KHDESIIVVPENLDHAQLKHFTKDELFNYFKAEMTKMKRQYELKEHEMTEEYFTLKREYL 405

Query: 404 KERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLL 463
           +ERGSSLP++KDKE D L+KKIPEV+ KLD IL ENEKLP+FS N + L N KDRLESL 
Sbjct: 406 RERGSSLPVRKDKELDTLKKKIPEVILKLDGILAENEKLPSFSNNGDCLDNLKDRLESLR 465

Query: 464 LENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEAS 523
           LEN QLR  L DKK E+K LS +VS+ ++ +L+RSL EENL K + NL+  L+ + I+ +
Sbjct: 466 LENHQLRDSLADKKKEIKCLSSQVSNASDKILERSLAEENLSKMLENLKSTLEVSRIQTA 525

Query: 524 ITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGN 583
           I++ ++K LL E    +K  S++ ++E ++MQ +Y+ I  +AA NA P +          
Sbjct: 526 ISDDLFKFLLKEVVGQMKGFSEELEMEMDIMQGIYKNILKEAAENAEPTS---------- 575

Query: 584 LQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNAT 643
                DD+ IE+ I  G+ + +LRE+                         F +A   A 
Sbjct: 576 -TLKFDDSVIESIIMPGLCEIVLRES-------------------------FKEAEEKAV 609

Query: 644 PGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKL 703
             +            I ++   V F  A  E E  L              RL +AEK+KL
Sbjct: 610 TWNL---------RYINENEARVSFEMAALEKEQAL--------------RLNIAEKDKL 646

Query: 704 KQETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEF 763
           +QE  LL +++++K NLV E    L +EK+  +  SQ+L +LR +T  Q+ L+SK   E 
Sbjct: 647 EQEMLLLRAVIDDKTNLVLEVTGALAQEKEKYELASQKLDNLRVQTMHQKELVSKYDGEL 706

Query: 764 NDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEET------------------ 805
             +K +L  ALE+I+  K E+  L+++L++  ++LR+  EE                   
Sbjct: 707 QIVKDDLDKALEKIKMDKGEISKLREQLKIVTQKLREAIEEKNVLLSVSQEHQNTLVLVE 766

Query: 806 ------RKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVIT 859
                 RKQ+   +I +Q LSK V DFECR   D+   + RL+ LSSQ   L+  AN + 
Sbjct: 767 AREIEYRKQINSTIILVQELSKAVTDFECRTTEDLRVNSLRLEHLSSQLSSLVQDANKLR 826

Query: 860 RTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIME 919
           RTGL YKQKLE RCSDL+KAEAEVDLLGDEVDTL  LLEKIYIALDHYS +LQHYPGIME
Sbjct: 827 RTGLMYKQKLEVRCSDLRKAEAEVDLLGDEVDTLLSLLEKIYIALDHYSPILQHYPGIME 886

Query: 920 ILRLVRRELSGEFIK 934
           +L+LVRRELSGE +K
Sbjct: 887 VLKLVRRELSGESVK 901

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147794011|emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/890 (47%), Positives = 562/890 (63%), Gaps = 77/890 (8%)

Query: 6    SPTALEGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFD-SYWDDINDRLTISRM 64
            SP  LE S  V + SV + GDESV + N+V+ +EN  + + +   SY +DINDRLTISRM
Sbjct: 467  SPEILE-SIRVSDASVSSCGDESVQLSNSVKGSENLGDDLLEDLDSYLEDINDRLTISRM 525

Query: 65   VSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSV 124
            VS+SVIKGMVNA+ QEA EKIA K LE+  L+E+LH  HV A+E++PF+SL+  HE+ + 
Sbjct: 526  VSNSVIKGMVNAVAQEANEKIAMKNLEVAGLKEALHFCHVDADETDPFRSLINFHEAKNK 585

Query: 125  K----HGSYSSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVG 180
            K        ++L+++D++ ES+G LK+ A+EQ K L+KEI  I+G S +RRI S SE VG
Sbjct: 586  KCRSASSLLAALAEHDRLRESLGNLKSSAREQFKKLQKEISGIRGSSPMRRINSSSE-VG 644

Query: 181  LGGILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIE 240
            L GILQ+K S+ +W DVDK +D+L TTLDT++   +N VYLSKAS+ +W Q+ EFQGEIE
Sbjct: 645  LCGILQEKASE-KWTDVDKTIDTLMTTLDTVYEQVNNIVYLSKASVSEWLQDWEFQGEIE 703

Query: 241  DMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEI 300
             MVI +  RSL+EEFEER  +Q+A F  N S+ W  K KEIS LR+EL+AISK LS SE 
Sbjct: 704  AMVIEHSIRSLREEFEERSWNQNAHFCGNGSVYWPEKTKEISRLRQELDAISKMLSTSEF 763

Query: 301  GHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSN 360
            G L SHGS E+GEEW+  K TDH HRK  SNHV  +TS  EGNGKH+ES   M ENL+S+
Sbjct: 764  GQLISHGSCEIGEEWNNTKGTDHFHRKVLSNHVSPATSVWEGNGKHEESKTSMPENLESS 823

Query: 361  --LKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEF 418
              LKHMSKEEL NHFK EMTKM+R HE +V EM E   +LK ++LKERGSSLP++KDKEF
Sbjct: 824  SLLKHMSKEELFNHFKTEMTKMRRNHESQVQEMAEQYISLKGKFLKERGSSLPLRKDKEF 883

Query: 419  DILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKN 478
            D +RKKIPEV+ KLDDILVENEKLPAFS NAE L + KDRL++LL EN QLR  LTD+K 
Sbjct: 884  DAMRKKIPEVILKLDDILVENEKLPAFSNNAESLGSLKDRLDTLLSENHQLRDSLTDRKK 943

Query: 479  EVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAAD 538
            EV+ LS ++S  AE M Q SL E  L+K IGNL+ A++DA IEASI+E V KC+L E  +
Sbjct: 944  EVRYLSTQLSVAAEKMSQHSLAEAKLLKIIGNLKSAIEDAKIEASISEDVNKCILSEVTN 1003

Query: 539  FIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASIS 598
             IK  +++S++E  LMQ++YE+I  +AA NA   ++E            + DA  + +I 
Sbjct: 1004 QIKCDTEESNMESTLMQQIYEVILREAAQNAETTSKE-----------VMKDAEAKLNIM 1052

Query: 599  EGVYKCLLREAVD-SIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMES 657
               Y C     V   IK V ++  L  E  ++                     E    E 
Sbjct: 1053 NVKYDCENEARVSIEIKVVEKEKALRLEFDEK---------------------ERLKQEI 1091

Query: 658  VIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEE- 716
            ++++   E   R AL+ A+  + E  Q      EL  L    +E   Q+ +L+S    E 
Sbjct: 1092 ILLEASLEEKERSALEIADALVKEKEQFELASQELNNL----REHTNQQQKLISESSREA 1147

Query: 717  ---KENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDA 773
               K NLV EA    LE+ DL K    EL        +Q++ I +      D +  +  A
Sbjct: 1148 DITKGNLV-EA----LEQIDLQKVEICEL--------KQKLEIKRKELGETDEQRRMLLA 1194

Query: 774  LEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVAD 833
            + +  Q  L + + +++             E  KQ++ +++F+ GLSK +A+FE R   D
Sbjct: 1195 VARETQNALSLVEARER-------------EHSKQMESIIVFMNGLSKVMAEFEGRVEKD 1241

Query: 834  IERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEV 883
            ++R +FRL+  +SQ   LI KAN++ RT L YKQ+LERR SDLQKAEAE 
Sbjct: 1242 VKRNSFRLEHANSQLTPLIQKANILRRTSLRYKQRLERRYSDLQKAEAET 1291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056843|ref|XP_002299051.1| predicted protein [Populus trichocarpa] gi|222846309|gb|EEE83856.1| predicted protein [Populus trichocarpa]

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 411/931 (44%), Positives = 564/931 (60%), Gaps = 120/931 (12%)

Query: 6   SPTALEGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFDSYWDD-INDRLTISRM 64
           S   L  S  +++ ++       V + ++ EENEN    + +    + + I DRLTISR+
Sbjct: 3   SEEVLGSSAVIMDPTISPCNGSMVQLMDDGEENENLGVDLLNDLDLYLEDIKDRLTISRV 62

Query: 65  VSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSV 124
           VSDSVIKG+V+A+EQEAA KIAEKELEL RL++ LHLY VG+++        M+ E   +
Sbjct: 63  VSDSVIKGIVSAVEQEAARKIAEKELELTRLKKGLHLYIVGSDDGSVCSG--MRQEQKHI 120

Query: 125 KHGSYS-SLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGG 183
           K+  YS +  ++D++ ES+  LK     QL NL+KEI ++KG  S+RR  S SE+VGLGG
Sbjct: 121 KNELYSDTFVEHDRLQESLRNLKIDVTGQLTNLKKEIHKVKGSYSMRRRNSSSEIVGLGG 180

Query: 184 ILQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMV 243
           IL +KV D + +DVDK +D L TTLD+    A++ V+  K+   +WQQE+EFQ EIE +V
Sbjct: 181 ILLEKVPD-KLIDVDKMVDGLGTTLDSFCEHAEDMVHFPKSLFFEWQQEREFQAEIEGLV 239

Query: 244 IMNCFRSLKEEFEE-RLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEIGH 302
           I N  R L+EE E+ RLCDQ+ QFY N S +WL K+KE+SSLR+EL+AI+KSLSV E G 
Sbjct: 240 IKNSIRGLQEELEQQRLCDQNTQFYSNGSASWLEKVKELSSLRQELDAIAKSLSVPESGQ 299

Query: 303 LTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSN-- 360
           L SHGS+E              HRK+S +H          NG HDES+I   ENL++   
Sbjct: 300 LISHGSLE--------------HRKSSGHHFS--------NGNHDESVITRPENLEAAEL 337

Query: 361 LKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDI 420
           LK  +KEEL ++ K EMTKMKR HE KV ++TE+LFALK  YLKERGS+LP +KDK+ D 
Sbjct: 338 LKDKNKEELFHYLKTEMTKMKRDHESKVQKITEELFALKAVYLKERGSTLPGRKDKDLDT 397

Query: 421 LRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEV 480
           LRKKIPEV+ KLD+IL+ENEK+PA S++AE L   KDRLESL +EN +L+ LL  KK E+
Sbjct: 398 LRKKIPEVILKLDNILIENEKVPAMSDSAESLDTMKDRLESLRIENCELQDLLAQKKKEI 457

Query: 481 KRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFI 540
           K LS +VSD AE  LQ S TE NL + I NL+ +++DAHIEA+I+E +YK LL E    I
Sbjct: 458 KLLSSQVSDAAEKTLQHSRTEVNLFRMITNLKSSIEDAHIEATISEHLYKLLLKEFMGQI 517

Query: 541 KSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEG 600
           K  SK+SDLEY  M+   E IF +AA N  P +           +  ++D+++E+ I +G
Sbjct: 518 KCFSKESDLEYNSMEGSSENIFREAAQNVKPAS-----------KLEIEDSDMESIIMQG 566

Query: 601 VYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIM 660
           V +  L+EA    K   EK                                  +++ +  
Sbjct: 567 VLEIGLQEA---FKEAEEK------------------------------LSSLNLKYIDE 593

Query: 661 QDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENL 720
            +    + REA+++ E            E  L    + EK+KL+QE+  +  L +EKEN 
Sbjct: 594 NEARLSLEREAMEKLE-----------QEIHLLTATIKEKDKLEQES--VDELEKEKENF 640

Query: 721 VSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQY 780
                          + +SQEL  L+ +T+ QQ L++++ +E  + +  L  A +     
Sbjct: 641 ---------------ELVSQELDSLKAQTN-QQGLLTENLRETAEERSRLLAASQ----- 679

Query: 781 KLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFR 840
                   +KL L     R+  EE    +    + + GLS+ V DFE RA  +IER + R
Sbjct: 680 --------EKLSLVEAREREHREELASTI----VLVNGLSRAVTDFENRATKEIERKSLR 727

Query: 841 LDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKI 900
           L++L+SQ   LI K + + RTG  YK+ LE RCSDLQKAEAEVDLLGD+V+ L  LLEKI
Sbjct: 728 LENLNSQFGSLIQKVSRLKRTGFLYKKNLESRCSDLQKAEAEVDLLGDKVENLQRLLEKI 787

Query: 901 YIALDHYSSVLQHYPGIMEILRLVRRELSGE 931
           YIALDHYS +L+HYPGI EIL+L+RREL+GE
Sbjct: 788 YIALDHYSLILKHYPGITEILKLIRRELNGE 818

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434230|ref|XP_004134899.1| PREDICTED: WPP domain-associated protein-like [Cucumis sativus]

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 392/930 (42%), Positives = 543/930 (58%), Gaps = 122/930 (13%)

Query: 43  NLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLY 102
           + +EDFDS W D+ DRLT+SR+VSDSV+KGMVNAI QEA EKI +KELE+  L++ L  Y
Sbjct: 28  DFLEDFDSCWQDLTDRLTVSRLVSDSVVKGMVNAISQEAHEKITQKELEVSELKKILQSY 87

Query: 103 HVGAEE------SEPFQSLVMKHESGSVKHGSYSSLSDYDKIGESVGGLKNVAKEQLKNL 156
           H+G +       + P +    K       +    +  ++D + ES+  LKN AKE    L
Sbjct: 88  HLGPDSESAKFLASPLRLCKPKCSEFDRNNSIRGAFFEHDGMTESMCSLKNTAKENFNKL 147

Query: 157 RKEIDRIKGCSSLRRIGSGSEMVGLGGIL--QDKVSDIRWMDVDKALDSLRTTLDTIFNC 214
           +KEIDRI+GC+S+R+I SGSE+VGLG     Q+K S  R +DVDK +D L+  LDT +  
Sbjct: 148 KKEIDRIRGCNSIRKINSGSELVGLGLGGILQEKASS-RCIDVDKIVDDLQDNLDTFYKQ 206

Query: 215 ADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNW 274
            +  V LSKASL QWQ E+E+  +IE MVI N   S+++EFEE+L DQ+A+    E    
Sbjct: 207 VEGIVQLSKASLGQWQVEQEYLADIEGMVIRNYIWSMQQEFEEKLWDQNAKILSTERKIS 266

Query: 275 LGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVG 334
             K+KEIS LR+EL+ I KSLS  E+GHL S+ S++          +DH HRK   N   
Sbjct: 267 AEKMKEISCLRQELDIILKSLS-PEVGHLISYSSMD----------SDHSHRKLLGNMT- 314

Query: 335 VSTSPSEGNGKHDESIIVMSENLD-SNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTE 393
             T   EGNGKH+ S   +  N+D S LKHM K+EL+NHF  EMTKM R HE +V E+TE
Sbjct: 315 -PTLHREGNGKHEMSKTNLPGNVDPSRLKHMGKDELINHFNTEMTKMSRNHESQVQEITE 373

Query: 394 DLFALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLC 453
           + F LKRE LKER  S  +KKD+EFD+LR+KIP+++ KLDD+L+ENEKL +   N E L 
Sbjct: 374 ENFTLKREILKEREKSSMLKKDREFDLLRRKIPDIIVKLDDVLMENEKLRSSDANDENLG 433

Query: 454 NFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQG 513
             ++RLESL+ EN  L+ LL +KK E+K LS +VS  AE M Q SL     +  I  ++ 
Sbjct: 434 TMRNRLESLISENHHLKDLLGEKKKEIKCLSSQVSSHAEKMSQHSLALSESLITIEKIKC 493

Query: 514 ALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLA 573
            + DA  EASI E V+KC L E  D  K  +++S + Y++MQ +YE +F  A+       
Sbjct: 494 EMQDAQFEASICEDVFKCFLREMMDQSKCATEESAMRYDIMQGIYETVFEGASF------ 547

Query: 574 EENLVKRIGNLQGALDDANIE------ASISEGVYKCLLREAVDSIKSVSEKSDLEYELM 627
                  +G L    ++ ++E       ++ E V +  LREA + I S+  +       M
Sbjct: 548 -------VGELASTSENEHLEEESIIMQALLEVVLQESLREAEEKIISLHNR------YM 594

Query: 628 QEVYGIIF--SDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQK 685
           QE+   +    +  H         F++  +E+       E+I   AL             
Sbjct: 595 QEMSTRLSLEKEVLHCGQALEIEIFKNKKLEA-------ELISSRAL------------- 634

Query: 686 YFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHL 745
                      + EKE+L QE   +  L +EK+ L   A+A             +E+  L
Sbjct: 635 -----------LKEKEELVQEITFV--LEDEKKKL---ALAC------------EEVGSL 666

Query: 746 RDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNE-- 803
           +D+T+ Q+ILI KS +E N  K  LT+A++++   + E  +LK+KLE AM E R  +E  
Sbjct: 667 KDQTNSQEILIFKSHEESNTTKRKLTEAMQKVGLLEEENCELKRKLEQAMIEFRKVDEDR 726

Query: 804 ----------------------ETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRL 841
                                 E RKQ+++++  +Q LSK V DFE R +  I R N RL
Sbjct: 727 RLLVATVSENQDTKLLFEEKEKEYRKQMEMVIFVVQELSKEVFDFEHRVIDYISRNNERL 786

Query: 842 DSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIY 901
           +SLS ++K LI  A+++ R GL YKQ+LE+RCSDLQKAEAEVDLLGDEVD L  LLEK+Y
Sbjct: 787 ESLSFETKSLIQDASMVKRDGLIYKQRLEKRCSDLQKAEAEVDLLGDEVDALLRLLEKMY 846

Query: 902 IALDHYSSVLQHYPGIMEILRLVRRELSGE 931
           IALDHYS +L+HYPGI+E L+LV+REL G+
Sbjct: 847 IALDHYSPILKHYPGIVETLKLVKRELRGD 876

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558063|ref|XP_003547328.1| PREDICTED: WPP domain-associated protein-like [Glycine max]

 Score =  566 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 387/938 (41%), Positives = 561/938 (59%), Gaps = 103/938 (10%)

Query: 6   SPTALEGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFDSYWDDINDRLTISRMV 65
           S  A+EG   + +      G E   + N++       +++++ DS+ +DI++ L ISRMV
Sbjct: 3   SSAAMEGGDRIYDN-----GKEDASVSNHI-------DILKEMDSFLEDIDEGLIISRMV 50

Query: 66  SDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSVK 125
            DSVIKGMVNA+E++AAE+IA+KELE+V L++ L  + VG++E++   SLV   E   V 
Sbjct: 51  GDSVIKGMVNAVEEQAAERIAQKELEVVGLKKILDEFRVGSDETKTLWSLVHHREPDEVG 110

Query: 126 -HGSYSSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGI 184
            H    S+  +D+   SV   +    EQL  LRKE+++I+G SS+RRI SGS++VGLGGI
Sbjct: 111 MHQFPDSVVGHDRCIMSVDSFQIAVHEQLNQLRKEVNKIRGASSIRRISSGSDLVGLGGI 170

Query: 185 LQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVI 244
           LQ+ + + +W+ V+KA +SL+ TLDT     ++  +LSKASL +WQQE++F  EIE MVI
Sbjct: 171 LQENMPE-KWIYVNKAFESLKDTLDTFCRRMEDMDHLSKASLSEWQQEQDFCSEIERMVI 229

Query: 245 MNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEIGHLT 304
            N    L+++FE++L D     YD+ES N   + KEISSLR+EL+AI K+LSVSE GHL 
Sbjct: 230 SNSIWGLQQQFEQKLLD----LYDSESRNCFNQYKEISSLRQELDAIFKTLSVSETGHLL 285

Query: 305 SHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDS-NLKH 363
           SHGS+E  +EW  NK  DH H K S++   +S S  E NGK +ES I   ENLDS +LKH
Sbjct: 286 SHGSLENTDEWCHNKRVDHFHVKLSTD--PLSPSTMEENGKQEESKINKPENLDSASLKH 343

Query: 364 MSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYL--KERGSSLPIKKDKEFDIL 421
           MSKE+LV +    +TKM+R HE +V E TE+ F L+RE L  KERGSS P+KKDKEF++L
Sbjct: 344 MSKEDLVTY----ITKMRRNHESQVQEKTEENFRLRRELLNLKERGSSFPLKKDKEFELL 399

Query: 422 RKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVK 481
           +KKIP+V+SKL++IL  NEK+  FSEN E L + KDRL+ L LEN QL+  L+D K E K
Sbjct: 400 KKKIPDVISKLNEILDGNEKVHQFSENIESLSSLKDRLDFLQLENHQLKDTLSDMKKEFK 459

Query: 482 RLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIK 541
            LS ++S + E + Q+ LT++NL++ I  L+  + DAH + S+ + VYKC   +     +
Sbjct: 460 SLSSQLSASVEKLSQQQLTQKNLLQTIQKLEDDIGDAHTQVSVIQDVYKCFFEDIVSEFR 519

Query: 542 SVSKKSDLEYELMQEVYEIIFSDAAHNA---TPLAEENLVKRIGNLQGALDDANIEASIS 598
             +++  L+   MQE+YE+IF +A+H+A   + L  E        +QG LD       I+
Sbjct: 520 YSTEELHLKNSFMQEIYEVIFKEASHSAQASSGLGIEEAEMESTIMQGQLD-------IN 572

Query: 599 EGVYKCLLREAVDSIKSVS-EKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMES 657
             ++K  L  A +++K  S EK  L+YE++  +  ++  +       G+  A        
Sbjct: 573 HIIFKETLMNADEALKFESAEKETLKYEMLM-LNSVV--EEKEKLIQGAADAL------- 622

Query: 658 VIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEK 717
                   V+ ++  + A  +LN L           R E+ ++ KL  E      L   K
Sbjct: 623 --------VLEKQKTESASEQLNSL-----------RAEIVQQHKLIAENS--KELNVTK 661

Query: 718 ENLVSEAVATLLEEK----DLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDA 773
            NLV+ A+  + + K    +L ++L Q ++ L++    +++L + + K            
Sbjct: 662 GNLVA-ALKEIEQYKEQVQELHQNLEQRMNKLKETDEEKKVLCTLTQK------------ 708

Query: 774 LEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVAD 833
             Q E  KL               + +   E+RKQ++  +  I  L   V DFE R   D
Sbjct: 709 --QQETLKL---------------IEEKERESRKQMESTINLIYKLLAMVTDFEARVNKD 751

Query: 834 IERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTL 893
           I R    L+++ S+   +  KANV+   GL +KQ+LE + SDL KAEAEVDLLGDEVDTL
Sbjct: 752 ISRNRLSLENMRSEFHWIKNKANVLKTMGLVHKQRLETKSSDLLKAEAEVDLLGDEVDTL 811

Query: 894 SGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGE 931
             LLEKIYIALDHYS +LQHYPGI+EIL LVRREL+G+
Sbjct: 812 LSLLEKIYIALDHYSPILQHYPGIIEILELVRRELTGD 849

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122344|ref|XP_002330600.1| predicted protein [Populus trichocarpa] gi|222872158|gb|EEF09289.1| predicted protein [Populus trichocarpa]

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 346/738 (46%), Positives = 467/738 (63%), Gaps = 103/738 (13%)

Query: 219 VYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKI 278
           V  SK SL +WQQEKEFQ EIE +VI NC R L+EEFE+ L DQ+ QF+ N S +WL K+
Sbjct: 2   VRFSKLSLFEWQQEKEFQAEIEGLVIQNCIRGLQEEFEQSLWDQNTQFFGNVSASWLEKV 61

Query: 279 KEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTS 338
           KE+SSLR+EL+AI+KSL VSE G L SHGS E              HRK+S +HV     
Sbjct: 62  KELSSLRQELDAIAKSLFVSESGLLISHGSFE--------------HRKSSGHHVS---- 103

Query: 339 PSEGNGKHDESIIVMSENLDS-NLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFA 397
               NG HDESII M ENL++  LKHM++EEL ++ K EMTKMKR HE KV EMTE++F+
Sbjct: 104 ----NGNHDESIITMPENLEAAQLKHMNREELFHYLKTEMTKMKRHHESKVQEMTEEIFS 159

Query: 398 LKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKD 457
           LKREYLKERGSSLP++KDK+ DILRKKI EV+ KLDDILVENEK+P+ S NAE L N KD
Sbjct: 160 LKREYLKERGSSLPVRKDKDLDILRKKIAEVILKLDDILVENEKVPSASNNAESLDNMKD 219

Query: 458 RLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDD 517
           RLESL LEN +LR LL  K  E+K LS +VSD  E M Q SLTE NL++ I NL+  ++D
Sbjct: 220 RLESLRLENHELRDLLAQKIREIKLLSSQVSDATEKMSQHSLTEVNLLRIITNLKSLIED 279

Query: 518 AHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENL 577
            H E +I+E ++K LL E    IK  +K+SDLEY+ M+ +YEIIF +AA NA        
Sbjct: 280 THAETTISEDLHKILLKEFMGQIKCFTKESDLEYDFMEGIYEIIFREAAQNA-------- 331

Query: 578 VKRIGNLQGALDDANIEASISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSD 637
            K    L+  ++D+++E+ I++G+ +  L+EA              ++  +E  G +   
Sbjct: 332 -KSASKLE--IEDSDMESIITQGLLEVGLQEA--------------FKEAEEKLGSLNQK 374

Query: 638 AAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEV 697
                    T   E  + E  +         R ++ E E    +L+Q   + T      +
Sbjct: 375 YVDENKVRLTLEMEAMEKEKAL---------RMSIAEKE----KLDQDIHLLTAT----I 417

Query: 698 AEKEKLKQETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILIS 757
            EK+KL +E+    +L +EKENL            +L+   S+EL +LR +TS+Q++LIS
Sbjct: 418 QEKDKLVREST--DALEKEKENL------------ELA---SRELGNLRAQTSQQRLLIS 460

Query: 758 KSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEET------------ 805
           ++S+E   +K +L +AL++ +  + E+  L++K++L  + LR+  EE             
Sbjct: 461 QNSEESEIIKHDLLEALDKNKLCEEEISKLQEKIQLVTENLREATEEKSMLLAVSQEKQS 520

Query: 806 ---------RKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKAN 856
                    R+Q+  +V+ + GLS+ V DFE RA  +I+R + RL++LSSQS  LI KA 
Sbjct: 521 LVEAREREHREQLDSIVVLVNGLSRAVTDFESRATKEIKRSSLRLENLSSQSGSLIQKAG 580

Query: 857 VITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPG 916
           ++TR G  +KQKLE RCSDLQKAEAEVDLLGDEV+ L  LLEKIYIALDHYS +L+HY G
Sbjct: 581 ILTRMGFLHKQKLESRCSDLQKAEAEVDLLGDEVENLLSLLEKIYIALDHYSPILKHYSG 640

Query: 917 IMEILRLVRRELSGEFIK 934
           I EIL+LVRREL+GE +K
Sbjct: 641 ITEILKLVRRELNGESMK 658

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449490740|ref|XP_004158693.1| PREDICTED: WPP domain-associated protein-like [Cucumis sativus]

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 381/930 (40%), Positives = 529/930 (56%), Gaps = 151/930 (16%)

Query: 43  NLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLY 102
           + +EDFDS W D+ DRLT+SR+VSDSV+KGMVNAI QEA EKI +KELE+  L++ L  Y
Sbjct: 28  DFLEDFDSCWQDLTDRLTVSRLVSDSVVKGMVNAISQEAHEKITQKELEVSELKKILQSY 87

Query: 103 HVGAEE------SEPFQSLVMKHESGSVKHGSYSSLSDYDKIGESVGGLKNVAKEQLKNL 156
           H+G +       + P +    K       +    +  ++D + ES+  LKN AKE    L
Sbjct: 88  HLGPDSESAKFLASPLRLCKPKCSEFDRNNSIRGAFFEHDGMTESMCSLKNTAKENFNKL 147

Query: 157 RKEIDRIKGCSSLRRIGSGSEMVGLGGIL--QDKVSDIRWMDVDKALDSLRTTLDTIFNC 214
           +KEIDRI+GC+S+R+I SGSE+VGLG     Q+K S  R +DVDK +D L+  LDT +  
Sbjct: 148 KKEIDRIRGCNSIRKINSGSELVGLGLGGILQEKASS-RCIDVDKIVDDLQDNLDTFYKQ 206

Query: 215 ADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNESLNW 274
            +  V LSKASL QWQ E+E+  +IE MVI N   S+++EFEE+L DQ+A+    E    
Sbjct: 207 VEGIVQLSKASLGQWQVEQEYLADIEGMVIRNYIWSMQQEFEEKLWDQNAKILSTERKIS 266

Query: 275 LGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVG 334
             K+KEIS LR+EL+ I KSLS  E+GHL S+ S++          +DH HRK   N   
Sbjct: 267 AEKMKEISCLRQELDIILKSLS-PEVGHLISYSSMD----------SDHSHRKLLGNMT- 314

Query: 335 VSTSPSEGNGKHDESIIVMSENLD-SNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTE 393
             T   EGNGKH+ S   +  N+D S LKHM K+EL+NHF  EMTKM R HE +V E+TE
Sbjct: 315 -PTLHREGNGKHEMSKTNLPGNVDPSRLKHMGKDELINHFNTEMTKMSRNHESQVQEITE 373

Query: 394 DLFALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLC 453
           + F LKRE LKER  S  +KKD+EFD+LR+KIP+++ KLDD+L+ENEKL +   N E L 
Sbjct: 374 ENFTLKREILKEREKSSMLKKDREFDLLRRKIPDIIVKLDDVLMENEKLRSSDANDENLG 433

Query: 454 NFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQG 513
             ++RLESL+ EN  L+ LL +KK E+K                              + 
Sbjct: 434 TMRNRLESLISENHHLKDLLGEKKKEIK-----------------------------FKC 464

Query: 514 ALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLA 573
            + DA  EASI E V+KC L E  D  K  +++S + Y++MQ +YE +F  A+       
Sbjct: 465 EMQDAQFEASICEDVFKCFLREMMDQSKCATEESAMRYDIMQGIYETVFEGASF------ 518

Query: 574 EENLVKRIGNLQGALDDANIE------ASISEGVYKCLLREAVDSIKSVSEKSDLEYELM 627
                  +G L    ++ ++E       ++ E V +  LREA + I S+  +       M
Sbjct: 519 -------VGELASTSENEHLEEESIIMQALLEVVLQESLREAEEKIISLHNR------YM 565

Query: 628 QEVYGIIF--SDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQK 685
           QE+   +    +  H         F++  +E+       E+I   AL             
Sbjct: 566 QEMSTRLSLEKEVLHCGQALEIEIFKNKKLEA-------ELISSRAL------------- 605

Query: 686 YFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHL 745
                      + EKE+L QE   +  L +EK+ L   A+A             +E+  L
Sbjct: 606 -----------LKEKEELVQEITFV--LEDEKKKL---ALAC------------EEVGSL 637

Query: 746 RDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNE-- 803
           +D+T+ Q+ILI KS +E N  K  LT+A++++   + E  +LK+KLE AM E R  +E  
Sbjct: 638 KDQTNSQEILIFKSHEESNTTKRKLTEAMQKVGLLEEENCELKRKLEQAMIEFRKVDEDR 697

Query: 804 ----------------------ETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRL 841
                                 E RKQ+++++  +Q LSK V DFE R +  I R N RL
Sbjct: 698 RLLVATVSENQDTKLLFEEKEKEYRKQMEMVIFVVQELSKEVFDFEHRVIDYISRNNERL 757

Query: 842 DSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIY 901
           +SLS ++K LI  A+++ R GL YKQ+LE+RCSDLQKAEAEVDLLGDEVD L  LLEK+Y
Sbjct: 758 ESLSFETKSLIQDASMVKRDGLIYKQRLEKRCSDLQKAEAEVDLLGDEVDALLRLLEKMY 817

Query: 902 IALDHYSSVLQHYPGIMEILRLVRRELSGE 931
           IALDHYS +L+HYPGI+E L+LV+REL G+
Sbjct: 818 IALDHYSPILKHYPGIVETLKLVKRELRGD 847

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740840|emb|CBI31022.3| unnamed protein product [Vitis vinifera]

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 283/484 (58%), Positives = 354/484 (73%), Gaps = 20/484 (4%)

Query: 6   SPTALEGSCGVVNGSVCAVGDESVMIDNNVEENENPANLVEDFD-SYWDDINDRLTISRM 64
           SP  LE S  V + SV + GDESV + N+V+ +EN  + + +   SY +DINDRLTISRM
Sbjct: 3   SPEILE-SIRVSDASVSSCGDESVQLSNSVKGSENLGDDLLEDLDSYLEDINDRLTISRM 61

Query: 65  VSDSVIKGMVNAIEQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVMKHESGSV 124
           VS+SVIKGMVNA+ QEA EKIA K LE+  L+E+LH  HV A+E++PF  L         
Sbjct: 62  VSNSVIKGMVNAVAQEANEKIAMKNLEVAGLKEALHFCHVDADETDPFSLL--------- 112

Query: 125 KHGSYSSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGI 184
                ++L+++D++ ES+G LK+ A+EQ K L+KEI  I+G S +RRI S SE VGL GI
Sbjct: 113 -----AALAEHDRLRESLGNLKSSAREQFKKLQKEISGIRGSSPMRRINSSSE-VGLCGI 166

Query: 185 LQDKVSDIRWMDVDKALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVI 244
           LQ+K S+ +W DVDK +D+L TTLDT++   +N VYLSKAS+ +W Q+ EFQGEIE MVI
Sbjct: 167 LQEKASE-KWTDVDKTIDTLMTTLDTVYEQVNNIVYLSKASVSEWLQDWEFQGEIEAMVI 225

Query: 245 MNCFRSLKEEFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEIGHLT 304
            +  RSL+EEFEERL +Q+A F  N S+ W  K KEIS LR+EL+AISK LS SE G L 
Sbjct: 226 EHSIRSLREEFEERLWNQNAHFCGNGSVYWPEKTKEISRLRQELDAISKMLSTSEFGQLI 285

Query: 305 SHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSN--LK 362
           SHGS E+GEEW+  K TDH HRK  SNHV  +TS  EGNGKH+ES   M ENL+S+  LK
Sbjct: 286 SHGSCEIGEEWNNTKGTDHFHRKVLSNHVSPATSVWEGNGKHEESKTSMPENLESSSLLK 345

Query: 363 HMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDILR 422
           HMSKEEL NHFK EMTKM+R HE +V EM E   +LK ++LKERGSSLP++KDKEFD +R
Sbjct: 346 HMSKEELFNHFKTEMTKMRRNHESQVQEMAEQYISLKGKFLKERGSSLPLRKDKEFDAMR 405

Query: 423 KKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVKR 482
           KKIPEV+ KLDDILVENEKLPAFS NAE L + KDRL++LL EN QLR  LTD+K E+  
Sbjct: 406 KKIPEVILKLDDILVENEKLPAFSNNAESLGSLKDRLDTLLSENHQLRDSLTDRKKEIYE 465

Query: 483 LSLK 486
           + L+
Sbjct: 466 VILR 469

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448517|ref|XP_003594534.1| WPP domain-associated protein [Medicago truncatula] gi|355483582|gb|AES64785.1| WPP domain-associated protein [Medicago truncatula]

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 367/936 (39%), Positives = 539/936 (57%), Gaps = 120/936 (12%)

Query: 19  GSVCAVGDESVMIDNNVEENENPA-NLVEDFDSYWDDINDRLTISRMVSDSVIKGMVNAI 77
           G V   G E V  +   +++E+   +++E+ +S++DDI++RL ISRMVSDSVIKGMVNA+
Sbjct: 4   GFVVMNGGEKVFANGVKDDDESLGEHILEEMESFFDDIDERLIISRMVSDSVIKGMVNAV 63

Query: 78  EQEAAEKIAEKELELVRLRESLHLYHVGAEESEPFQSLVM---KHESGSVKHGSYSSLSD 134
           E++AAEKIA+KE E+V L++ L    VG++E++   S V     HE G  K      + +
Sbjct: 64  EEQAAEKIAQKESEVVGLKKKLRSLCVGSDEAKMMWSSVRCNETHEGG--KRHFLDGVME 121

Query: 135 YDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRW 194
            D++ + VG LK    EQL  L+KEI++I+G SS RR  SGS++VGLGGILQ+ V + RW
Sbjct: 122 TDRVVKPVGSLKFEIHEQLSQLKKEINKIRGLSSTRRFSSGSDLVGLGGILQENVPE-RW 180

Query: 195 MDVDKALDSLRTTLDTIFNCADNTVYLSKAS-LCQWQQEKEFQGEIEDMVIMNCFRSLKE 253
           + VDKA +SL+ T+D++    + T  LSKA+ L  WQ+E+EF+ EIE  VI NC RSL++
Sbjct: 181 IYVDKAFESLKDTMDSLSRRIEITDQLSKATTLSDWQEEQEFRLEIERKVIRNCIRSLQQ 240

Query: 254 EFEERLCDQSAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGE 313
           E E +LCD      ++ES     + KEISSLR++L++I ++LSV E G L SHGS+E  +
Sbjct: 241 EIERKLCD----VCESESRISFNQYKEISSLRQDLDSIFRTLSVFETGTLISHGSLEHTD 296

Query: 314 EWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDS-NLKHMSKEELVNH 372
           +W  NK  DH+H K S++ + VST   E NGKH++S I   ++LDS +LK MSK++L+ +
Sbjct: 297 DWCHNKRADHVHLKLSTDLLTVSTL--EENGKHEDSKISKPDSLDSGSLKDMSKDDLITY 354

Query: 373 FKAEMTKMKRIHELKVTEMTEDLFALKREYL--KERGSSLPIKKDKEFDILRKKIPEVLS 430
               +TKM+R HE +V E TE+ F L+RE L  KERGSS  +KKDK+FD+L+KKIP+ +S
Sbjct: 355 ----ITKMRRNHESQVQEKTEENFCLRRELLNLKERGSSFSLKKDKDFDLLKKKIPDAIS 410

Query: 431 KLDDILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDT 490
           KL+++L  NEKL  FSEN E LC+FKDRL+ L  EN QL+ +LTDK  E+K LS ++S  
Sbjct: 411 KLNEVLDGNEKLRQFSENIESLCSFKDRLDFLQSENYQLKDMLTDKNKEIKSLSSQLSAA 470

Query: 491 AEIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLE 550
            E + Q+ LTEENL++ +  L+  + DAH+EAS+ + VYKCL  +     + +++   L+
Sbjct: 471 MEKLSQQQLTEENLLQSVQKLEDDVGDAHVEASVIQDVYKCLFKDMESECRFITEDLHLK 530

Query: 551 YELMQEVYEIIFS---DAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLLR 607
           Y  MQE+YE++     D+A  +  L  E        ++G LD       I++ ++K  L 
Sbjct: 531 YGFMQEIYEVMLKDTVDSAQVSNGLEIEEENIESIMIEGLLD-------INQIIFKGALV 583

Query: 608 EAVDSIKS-VSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYEV 666
           +A +++KS   E + L+ E++     +   D   N   G+T A E               
Sbjct: 584 DADEALKSEAVENNKLKCEILTLKTIVAEKD---NLIQGATDALEQ-------------- 626

Query: 667 IFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVA 726
             +  ++ A  +LN L  K    T+ +   + E  K          L   K NL  +A A
Sbjct: 627 -EKRKMESASEQLNSLRTK----TDHQHNWILENSK---------ELDVTKGNL--DAAA 670

Query: 727 TLLEEK-----DLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYK 781
             +E+       L ++L Q++  LR+        + K  +E   L     D L+ IE  +
Sbjct: 671 KEIEQYKEQMLKLHQNLEQKVHELRE--------VDKERRELCALTKKQQDTLKCIEAKE 722

Query: 782 LEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRL 841
                         +E R   E T   ++ L+  +  +  +V +       DI R   RL
Sbjct: 723 --------------RETRKQMESTINLIRKLLTMVNDVEASVNE-------DISRNRMRL 761

Query: 842 DSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAE------------------- 882
           +S+SS+   L  KA+ +   GL YKQ+ E + SDL KAEAE                   
Sbjct: 762 ESMSSEFCFLKNKASALKTMGLVYKQRFETKSSDLAKAEAERMHKGPRADVARGGCTCIV 821

Query: 883 --VDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPG 916
             VDLLGDEVDTL  LLE+IY+ALDHYS +LQHYPG
Sbjct: 822 FQVDLLGDEVDTLLRLLERIYVALDHYSPILQHYPG 857

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	936
TAIR|locus:2061524	825	AT2G34730 [Arabidopsis thalian	0.662	0.751	0.318	8.3e-82
UNIPROTKB|D4ABD7	1976	Trip11 "Protein Trip11" [Rattu	0.511	0.242	0.196	2.7e-08
UNIPROTKB|F1MU39	1947	F1MU39 "Uncharacterized protei	0.782	0.375	0.219	5.1e-08
UNIPROTKB|F1PUU8	1923	MYH15 "Uncharacterized protein	0.738	0.359	0.210	6.4e-08
TAIR|locus:2152985	1586	CIP1 "COP1-interactive protein	0.587	0.346	0.191	6.5e-08
SGD|S000002216	1790	USO1 "Protein involved in the	0.820	0.429	0.208	1.2e-07
MGI|MGI:2445022	917	A630007B06Rik "RIKEN cDNA A630	0.541	0.552	0.207	1.5e-07
RGD|1307115	1968	Cenpe "centromere protein E" [	0.611	0.290	0.225	2.1e-07
TAIR|locus:2147800	666	AT5G14990 "AT5G14990" [Arabido	0.113	0.159	0.314	2.3e-07
UNIPROTKB|Q9X0R4	1170	smc "Chromosome partition prot	0.506	0.405	0.220	3.3e-07

TAIR|locus:2061524 AT2G34730 [Arabidopsis thaliana (taxid:3702)]

 Score = 616 (221.9 bits), Expect = 8.3e-82, Sum P(2) = 8.3e-82
 Identities = 221/693 (31%), Positives = 328/693 (47%)

Query:   143 GGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRWMDVDKALD 202
             G   ++ K+  K L   ++ +        I      V     L     + R   VDK LD
Sbjct:   120 GSSSSLKKKARKQLLMLVEELTNLREYIHINGSGATVDDSLGLDSSPHETRSKTVDKMLD 179

Query:   203 SLRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQ 262
             SL++ L+T+     N + L  +    WQQE +FQ EIE  V+ +  RSLK+E+E+RL DQ
Sbjct:   180 SLKSILETVLK-RKNDMELPSS----WQQEHDFQKEIESAVVTSVLRSLKDEYEQRLLDQ 234

Query:   263 SAQFYDNESLNWLGKIKEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTD 322
              A+F  N SL  LG IKEI+ LR+EL AI KS     + H   +G  E GE  D  K  +
Sbjct:   235 KAEFGGNRSLI-LGNIKEITGLRQELEAIRKSF----LDH--ENGD-EAGEVGD-RKRVE 285

Query:   323 HLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKR 382
              LHRK S +   VS S  E NGKH+ES   +    +  L+HMS +E++NHFK EM KMKR
Sbjct:   286 QLHRKMSGSLNSVS-SVWE-NGKHEESSTGLIPEHNETLRHMSPDEMINHFKIEMNKMKR 343

Query:   383 IHELKVTEMTEDLFALKREYLK--ERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENE 440
              H+ K+ E+TE  F  KR+YL   ERGS   + KDKE   L+KKIP V+SKLD IL+E+E
Sbjct:   344 DHDYKIQELTEQCFTFKRKYLNLTERGSFSFVGKDKELGALKKKIPFVISKLDKILMEDE 403

Query:   441 KLPAFSENAEGLCNFKDXXXXXXXXXXXXXXXXTDKKNEVKRLSLKVSDTAEIMLQRSLT 500
             K  +  +N  GL    D                     E ++L   +SD AE M Q S  
Sbjct:   404 KFVSEGKNDAGLKRQLDSLLL-----------------ENRQLKDSLSDAAEKMSQLSQA 446

Query:   501 EENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEI 560
             E +  + I  L+  ++D+  EASI E VY C + E    IK   +++DLE+ +++E YE+
Sbjct:   447 EADHQELIRKLETDVEDSRNEASIYEDVYGCFVTEFVGQIKCTKQETDLEHSMLREAYEL 506

Query:   561 IFSDAAHNATPLAEENL----VKRIGNLQGALDDANIEASISEGVYKCL-LREAVDSIKS 615
             +  D A      ++E+     VK +  +         + ++ E   K + L   V   + 
Sbjct:   507 LLEDLARKEARKSKEDFEDSCVKSV--MMEECCSVIYKEAVKEAHKKIVELNLHVTEKEG 564

Query:   616 V--SEKSDLEYELMQEVY--GIIFSDAAHNA-TPGSTCAFEDCDMESVIMQ--DLYEVIF 668
                SE  D E  L +E++  G +  +  +   T  +  A E   +E V  Q  DL   + 
Sbjct:   565 TLRSEMVDKE-RLKEEIHRLGCLVKEKENLVQTAENNLATERKKIEVVSQQINDLQSQVE 623

Query:   669 REALK-----EA--EVKLNELNQKYFMETEL----RRLEVAEK--EKLKQETRL----LS 711
             R+  +     EA   V   EL +    ET++      LE+A +  +++K E R     LS
Sbjct:   624 RQETEIQDKIEALSVVSARELEKVKGYETKISSLREELELARESLKEMKDEKRKTEEKLS 683

Query:   712 SLVEEKENLVSEAVATXXXXXXXXXXXXXXXXHLRDETSRQQILISKSSKEFNDLKGNLT 771
                 EKE L  + V+                  L  E ++      K++    +++  L+
Sbjct:   684 ETKAEKETLKKQLVSLDLVVPPQLIKGFDILEGLIAEKTQ------KTNSRLKNMQSQLS 737

Query:   772 DALEQIEQYKLEVHDLKQKLELAMKELRDTNEE 804
             D   QI + K +    KQ+LE    +L+    E
Sbjct:   738 DLSHQINEVKGKASTYKQRLEKKCCDLKKAEAE 770

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|D4ABD7 Trip11 "Protein Trip11" [Rattus norvegicus (taxid:10116)]

 Score = 129 (50.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
 Identities = 104/529 (19%), Positives = 219/529 (41%)

Query:   217 NTVYLSKASLCQWQQEKEFQ-GEIEDMVI-MNC-FRSLKEEFEERLCDQS--AQFYDNES 271
             + + L +  L Q  QEK+F+  E++  +  M+   +  KE     L +Q   AQ   NE 
Sbjct:   752 SALQLEQERLIQLNQEKDFEIAELKKSIEQMDTDHKQTKETLSSSLEEQKQLAQLI-NEK 810

Query:   272 LNWLGKIKEISS-LREELNAISKSLSVSEIGHLT-SHGSIEMGE-EWDTNKWTDHLHR-- 326
                + K+KE SS L+ EL+  S++L  +E    T       +G  + + N   + L R  
Sbjct:   811 EICIVKLKEKSSELQRELDRCSQALRKNETLRQTIEEKDRSLGSMKEENNHLQEELERLR 870

Query:   327 KTSSNHVGVSTSPSEGNGKHDESII----VMSENLDSNLKHMSKEELVNHFKAEMTKMKR 382
             +  S  V V    +  +    ES +     + ++L+  +KH  K  ++        KM+ 
Sbjct:   871 EQQSRAVPVPEPRTLDSTTELESELSQLHTIKDHLEEEIKHHQK--MIED--QNQNKMQL 926

Query:   383 IHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVEN--E 440
             +  L+  +   D F  + E +    S L ++KD+E   L+K I ++ ++L +   ++  E
Sbjct:   927 LQSLQEQKKAMDEFKYQHEQMSITHSRLFLEKDEEIKNLQKTIEQIKAQLQEERQDSQTE 986

Query:   441 KLPAFSENAEGLCNFKDXXXXXXXXXXXXXXXXTDKKNEVKRLSLKVSDTAEIMLQRSLT 500
                 F E      N +                    K   + L +K+ +   I L + + 
Sbjct:   987 NSDIFQETKVQSLNIEIGSEKHDLSKAETERLVKGIKE--RELEIKLLNEKNISLTKQI- 1043

Query:   501 EENLVK-RIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVS--KKSDLEYELMQEV 557
              + L K  +G L   +    +E    + ++  +   +A + + V   ++    Y + +E 
Sbjct:  1044 -DQLSKDEVGKLTQIIQQKDVEI---QALHARI--SSASYSQDVVYLQQQVQAYAMEREK 1097

Query:   558 YEIIFSDAAHNATPLAEE--NLVKRIGNLQGAL---DDANIEASIS-EGVYKCLLREAVD 611
               ++ S+     + L  E   ++  +   + AL    D N + S   E   + + +E + 
Sbjct:  1098 VMVVLSEKTRENSKLKSEYHKMIDILSAKEAALIKLQDENKKMSTRFESSGQDMFKETIQ 1157

Query:   612 SIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDLYEVIFREA 671
             ++  +  + D+E + + +    + +    + T GS     + +    ++Q+      R+ 
Sbjct:  1158 NLSRIIREKDIEIDALSQKCQTLLTVLQTSGT-GSEVGGVNSNQFEELLQE------RDK 1210

Query:   672 LKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVE-EKEN 719
             LK+   K+ E  Q+    T ++ ++  E  +L++E   L + V  + +N
Sbjct:  1211 LKQQVKKMEEWKQQVM--TTVQNMQ-HESAQLQEELHQLQAQVSVDSDN 1256

GO:0000042 "protein targeting to Golgi" evidence=IEA

UNIPROTKB|F1MU39 F1MU39 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 167 (63.8 bits), Expect = 5.1e-08, P = 5.1e-08
 Identities = 183/832 (21%), Positives = 340/832 (40%)

Query:   123 SVKHGSYSSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLG 182
             SVK  S + + + ++I   +       +++   L+KEID ++   +  +    +  + + 
Sbjct:   931 SVKALS-ARVEEEEEINSKLTARGQKLEDECSELKKEIDDLETLLAKSQKEKHATELKVK 989

Query:   183 GILQDKVSDIRWMDVDK-------ALDSLRTTLDTIFNCADNTVYLSKASLCQWQQEKEF 235
              +L++ V  +   DV K       A ++ + TL+ + N  +    LSKA L   Q+  E 
Sbjct:   990 NLLEE-VESLN-EDVSKLHRAARAAQETHQQTLEDLRNEEEKVHTLSKAKLTLEQRVNEL 1047

Query:   236 QG--EIEDMVIMNCFRS-LKEEFEERLCDQSAQFYDNESLNWLGKIK----EISSLREEL 288
             +G  E E    MNC +   K E E +L  +S    ++  L    K++    E++ +R ++
Sbjct:  1048 EGALEQESKARMNCEKEKCKVEGELKLNQESMDDLESRQLQLAEKLRRKELEMNQMRSKV 1107

Query:   289 NAISKSLSVSEIGHLTSHGSIE---MGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGK 345
                 KSL V+++         +   + EE +  + T     K       +     + N +
Sbjct:  1108 EN-EKSL-VAQLQKTVKEFQTQIQLLKEELEAERTT---RAKVERERANLIRELEDMNER 1162

Query:   346 HDESIIVMSENLDSNLKHMSK--------EELVNHFKAEMTKMKRIHELKVTEMTEDLFA 397
              +E+  V S  L+   K  +K        EE   HF+A    +K+ H   + E+   +  
Sbjct:  1163 LEEAGGVSSAQLEITKKQETKFQKLRRDLEEATLHFEATSASLKKRHADSLAELESQVEN 1222

Query:   398 LKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKD 457
             L++  +K+      ++KDK  D+      E+  +++D+L+  E++     NAE LC+  +
Sbjct:  1223 LQQ--VKQT-----LEKDKS-DL------EL--EVNDLLIHVEQMTRAKANAEKLCSLYE 1266

Query:   458 XXXXXXXXXXXXXXXXTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDD 517
                               K +EV +L+  V  TA+    RS   E L KR+  ++  ++ 
Sbjct:  1267 ERLKEANA----------KLDEVTQLANDV--TAQKTKLRSENGE-LRKRLEEMEALINQ 1313

Query:   518 AHIEASITEGVYKCLLGEAADFIKSVS------KKSDLEYELMQEVYEIIFSDAAHNATP 571
                E SI     + L G+ A+  KS S      K +  + +L++E YE   +  A     
Sbjct:  1314 LSREKSIFTLQIQDLKGQLAEETKSQSALAQAVKSAKRDCDLLREQYEEEQAAKAELLQA 1373

Query:   572 LAEEN--LVKRIGNLQGALDDANIEASISEGVYKCL---LREAVDSIKSVSEKS-DLEYE 625
             L + N  +VK     +   DD    A   E   K L   L+EA +++   + ++  LE  
Sbjct:  1374 LLKGNAEMVKWRTKYE---DDTIQRAEDLEDAKKKLALRLQEAAEAMGVANARNASLERA 1430

Query:   626 LM--QEVYGIIFSDA--AHNATPGSTCAFEDCDMESVIMQDLYE---VIFREALKEAE-- 676
              +  Q   G   SD   A +A        +  D      +  +E    +   A KEA   
Sbjct:  1431 RLRLQLELGDTLSDLGQARSAAAALNQKQQHFDKSLDDWRRKHEESQAMLDAAKKEARAL 1490

Query:   677 -VKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEE-KENLVSEAVATXXXXXXX 734
              ++L EL   Y   T  +     E + LK+E   L++ V E K+NL S+           
Sbjct:  1491 SIQLLELRHSYEEGTMSQEALRRENKHLKEEISNLTNQVREGKKNL-SKMEKVKKQIEQE 1549

Query:   735 XXXXXXXXXHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELA 794
                             R +  + +   E +D K  L   L + ++   E+ + ++K + A
Sbjct:  1550 KNEVQMALEEAEGALERNESKVLRLQLELSDTKAELERKLSEKDE---EIENFRKKQQCA 1606

Query:   795 MKELRDT-NEETRKQVQL--LVIFIQG-LSKTVADFECRAVADIERCNFRLDSLSSQSKR 850
             +  L+ + + E R +++   L   ++G L++      C A          L  L +Q K 
Sbjct:  1607 IDSLQSSLDSEARCRIEATRLKRSMEGDLTEMELQLSC-ASRQASEATKSLGQLQTQVKD 1665

Query:   851 LILKANVITRTGLSYKQKL---ERRCSDLQKAEAEVDLLGDEVDTLSGLLEK 899
             L ++ +  T      K+++   ERR + LQ    E+  L ++ +    L E+
Sbjct:  1666 LQVQVDDSTCMNSELKEQVAVAERRNALLQAEVEELRSLQEQTERSRRLAEE 1717

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|F1PUU8 MYH15 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 166 (63.5 bits), Expect = 6.4e-08, P = 6.4e-08
 Identities = 165/785 (21%), Positives = 313/785 (39%)

Query:   150 KEQLKNLRKEIDRIKGC---SSLRRIGSGSEMVGLGGILQDKVSDIRWMD-VDKAL-DSL 204
             +++   L+KEID ++     S   +  +  ++  L   ++    DI  +    K + ++ 
Sbjct:   937 EDECSELKKEIDDLETILVKSQKEKCATEHKVKNLTEEVESLNEDISKLTRAAKVMQEAH 996

Query:   205 RTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIED--MVIMNCFRSL-KEEFEERLCD 261
             + TLD +    +    LSKA L   QQ  E +G +E      MNC R   K E +  L  
Sbjct:   997 QQTLDDLHIEEEKLSSLSKAKLKLEQQVDELEGALEQERKARMNCERERSKLEGDFELHR 1056

Query:   262 QSAQFYDNESLNWLGKIKEISSLREELNA-ISKSLS-VSEIGHLTSHGSIEM-G--EEWD 316
             +S +  ++  L   GK+ E      ++N+ + K  S V+++ ++     +++ G   E +
Sbjct:  1057 KSMEHLESSQLQLAGKLSEKELEMNQMNSKVEKERSLVAQLQNMVKELQVQIQGLKRELE 1116

Query:   317 TNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSNLKHMSK-----EELVN 371
               + T     K       ++      N + +E+       LD   K  +K      E+ N
Sbjct:  1117 VERTT---RAKVERERANLTQELENLNERLEEAGGTSLAQLDITKKQETKFQKLRREMEN 1173

Query:   372 ---HFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDILRKKIPEV 428
                HF+     +K+ H   + E+   L  L++  +K++     ++KDK          ++
Sbjct:  1174 ATLHFETTSASLKKRHADSLAELQGRLENLQQ--VKQK-----LEKDKN---------DL 1217

Query:   429 LSKLDDILVENEKLPAFSENAEGLCN-FKDXXXXXXXXXXXXXXXXTDKKNEVKRL---- 483
               ++DD+L   E++     N+E LC+ +++                 D K +  +L    
Sbjct:  1218 QLEVDDLLTNVEQMTRAKANSEKLCSLYEERLNEANGKLDEVTQLANDLKAQKTKLWSEN 1277

Query:   484 --SLKVSDTAEIML-QRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFI 540
                L+  +  E ++ Q S    N  ++I  L+G L++        E   +  L +A    
Sbjct:  1278 GELLRRLEEKEALINQLSRERSNFTRQIEELKGQLEE--------ESKSQSALAQALQ-- 1327

Query:   541 KSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEG 600
                S K D  ++L+QE YE      A     L++ N       ++ A DD        E 
Sbjct:  1328 ---SAKHD--HDLLQEQYEEEQEAKAELLRALSKGNSEMVQWRMKYA-DDITQRTEDLED 1381

Query:   601 VYKCL---LREAVDSIKSVSEKS-DLE---YELMQEVYGIIFSDAAHNATPGSTCA---- 649
               K L   L+EA +++   + ++  LE   + L  E+ G    D     +  +       
Sbjct:  1382 AKKKLASRLQEAAEAVGVANARNASLERARHRLQLEL-GDTLCDLGKARSSAAVLGRKQQ 1440

Query:   650 -FEDC-D---MESVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRR-LEVAEKEKL 703
              F+ C D    +    Q + E   REA +    +L EL Q Y   +  R  L+ A K+  
Sbjct:  1441 HFDRCLDDWRQQQEESQAMLEASRREA-RALSAELLELRQAYEESSASRETLQTANKQLQ 1499

Query:   704 KQETRLLSSLVEEKENLVSEAVATXXXXXXXXXXXXXXXXHLRDETSRQQILISKSSKEF 763
             ++ + L + + E K NL SE                           R +  I +   E 
Sbjct:  1500 EEISNLTNQVREGKRNL-SEMEKVKKQIEQEKTQVQVALEEAEGALERNESKILRFQLEL 1558

Query:   764 NDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDT-NEETRKQVQL--LVIFIQG-L 819
              + K  L   L +  +   E+ +L++  + A+  L+ + + ETR ++++  L   ++G L
Sbjct:  1559 LEAKAELERKLSEKNE---EIENLRRNKQCAIDSLQSSLDSETRSRIEVTRLKKNVEGDL 1615

Query:   820 SKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQK--LERRCSDLQ 877
             S+      C A   +      L  L +Q K L ++ +  T      K++  +  R + L 
Sbjct:  1616 SEMELQLSC-ANRQVSEATKSLGQLQTQVKDLQVQLDDSTHLNSELKEQVAMAERHNSLL 1674

Query:   878 KAEAE 882
             ++E E
Sbjct:  1675 QSELE 1679

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

TAIR|locus:2152985 CIP1 "COP1-interactive protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 6.5e-08, P = 6.5e-08
 Identities = 114/594 (19%), Positives = 244/594 (41%)

Query:   231 QEKEFQGEIE--DMVIMNCFRSLKE-EFEERLCDQSAQFYDNESLNWLGKIKEISSLREE 287
             Q KE +  IE  + ++ +  +SL   E E++L  Q      NE       ++E+ S   E
Sbjct:   348 QVKELEAHIESSEKLVADFTQSLNNAEEEKKLLSQKIAELSNEIQEAQNTMQELMS---E 404

Query:   288 LNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPSEGNGKHD 347
                + +S SV E   L S   I    + D++     L  +  S+   VS   +      +
Sbjct:   405 SGQLKESHSVKE-RELFSLRDIHEIHQRDSSTRASELEAQLESSKQQVSDLSASLKAAEE 463

Query:   348 ESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTEDLFALKREYLKERG 407
             E+  + S+N+++  K    +  +    AE+ K+K  H  K +E++  L  +   +  +R 
Sbjct:   464 ENKAISSKNVETMNKLEQTQNTIQELMAELGKLKDSHREKESELSS-LVEVHETH--QRD 520

Query:   408 SSLPIKK-DKEFDILRKKIPEVLSKLDDILVENEKLPAFSENAEGLCNFKDXXXXXXXXX 466
             SS+ +K+ +++ +  +K + E+   L++   E EK    S+    L N +          
Sbjct:   521 SSIHVKELEEQVESSKKLVAELNQTLNN--AEEEK-KVLSQKIAELSN-EIKEAQNTIQE 576

Query:   467 XXXXXXXTDKKNEVKRLSL-KVSDTAEIMLQRSLTE-ENLVKRIGNLQGALDDAHIEASI 524
                      + + VK   L  + D  E   + S T    L  ++ + +  + D  ++   
Sbjct:   577 LVSESGQLKESHSVKDRDLFSLRDIHETHQRESSTRVSELEAQLESSEQRISDLTVDLKD 636

Query:   525 TEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVK----R 580
              E   K +  +  + +  + +  +   ELM E+ E+   D  H        +LVK    +
Sbjct:   637 AEEENKAISSKNLEIMDKLEQAQNTIKELMDELGEL--KDR-HKEKESELSSLVKSADQQ 693

Query:   581 IGNLQGALDDANIEAS-ISEGVYKCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAA 639
             + +++ +LD+A  E   +S+ +   +  E  ++ K++ E    E E ++E +G+   +  
Sbjct:   694 VADMKQSLDNAEEEKKMLSQRILD-ISNEIQEAQKTIQEHMS-ESEQLKESHGVKERELT 751

Query:   640 HNATPGSTCAFEDCDMESVIMQDLYEVIFREALKEAEVKLNELNQ-KYFMETELRRLEVA 698
                    T   E     S +   L   +  + + +    LN   + K  + + +  LE+ 
Sbjct:   752 GLRDIHETHQRESSTRLSELETQLK--LLEQRVVDLSASLNAAEEEKKSLSSMI--LEIT 807

Query:   699 EKEKLKQET--RLLSSLVEEKENLVSEAVATXXXXXXXXXXXXXXXXHLRDETSRQQIL- 755
             ++ K  Q     L++ L E K+ L  +                    H RD +S+ + L 
Sbjct:   808 DELKQAQSKVQELVTELAESKDTLTQKE-------NELSSFVEVHEAHKRDSSSQVKELE 860

Query:   756 --ISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRK 807
               +  + ++  +L  NL  + E+ +    ++ ++  K++ A   +++ + E+ +
Sbjct:   861 ARVESAEEQVKELNQNLNSSEEEKKILSQQISEMSIKIKRAESTIQELSSESER 914

GO:0005634 "nucleus" evidence=ISM

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005856 "cytoskeleton" evidence=IDA

GO:0042306 "regulation of protein import into nucleus" evidence=TAS

SGD|S000002216 USO1 "Protein involved in the ER to Golgi transport step of secretion" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 163 (62.4 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 178/855 (20%), Positives = 339/855 (39%)

Query:    96 RESLHLYHVGAEESEPFQS---LVMK-HESGSVKHGSYSSL-SDYDKIGESVGGLKNVAK 150
             +E  H+     E    FQS   LV K  E       +Y  + ++ + + ++V   KN + 
Sbjct:   934 KEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNESS 993

Query:   151 EQLKNLRKEIDRIKGCSSLRRIGSGSEMVGLGGILQDKVSDIRWM--DV----DKALDSL 204
              QL NL+ +ID +       +I  GS    +   L+  +SD+     ++    D + D  
Sbjct:   994 IQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQ-LKKTISDLEQTKEEIISKSDSSKDEY 1052

Query:   205 RTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERL-CDQS 263
              + +  +    +     +  ++ +  +  + + E+E    +  +++LK E E +L   + 
Sbjct:  1053 ESQISLLKEKLETATTANDENVNKISELTKTREELE--AELAAYKNLKNELETKLETSEK 1110

Query:   264 A--QFYDNESLNWLGKI---KEISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTN 318
             A  +  +NE      KI   KE +  +++LN++  +L   E  H      ++  EE   N
Sbjct:  1111 ALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIAN 1170

Query:   319 KWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSNLKHM--SKEELVNHFKAE 376
             K   +    +  N    ST       + +ESI   ++ L+  +K M  + EE  N  K+E
Sbjct:  1171 KERQYNEEISQLNDEITSTQ------QENESIKKKNDELEGEVKAMKSTSEEQSNLKKSE 1224

Query:   377 MTKMK-RIHELKVTEMTEDLFALKREYLKE-RGSSLPIKK-DKEFDILRKKIPEVLSKLD 433
             +  +  +I ELK    T +   L  E +K     ++ IK+   E +   K++ E+  KL 
Sbjct:  1225 IDALNLQIKELKKKNETNEASLL--ESIKSVESETVKIKELQDECNFKEKEVSELEDKLK 1282

Query:   434 DILVENEKLPAFSENAEGLCNFKDXXXXXXXXXXXXXXXXTD--KKNEVKRLSLKVSDTA 491
                 +N K     + +E +    D                +   +K+E +   LK + + 
Sbjct:  1283 ASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSE 1342

Query:   492 EIMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFI-KSVSKK-SDL 549
             E    R   EE L K    +Q       I+    E   K LL E +  I +  S+K + L
Sbjct:  1343 E----RKNAEEQLEKLKNEIQ-------IKNQAFEKERK-LLNEGSSTITQEYSEKINTL 1390

Query:   550 EYEL--MQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGV--YKCL 605
             E EL  +Q   E+   +  +  + L + +L     N +   +  N   S+ + +  YK  
Sbjct:  1391 EDELIRLQNENELKAKEIDNTRSELEKVSL----SNDELLEEKQNTIKSLQDEILSYKDK 1446

Query:   606 LREAVDSIKSVSE--KSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDMESVIMQDL 663
             +    + + S+    K DLE  L +++     S A      G     E+   E   ++  
Sbjct:  1447 ITRNDEKLLSIERDNKRDLE-SLKEQLRAAQESKA--KVEEGLKKLEEESSKEKAELEKS 1503

Query:   664 YEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSE 723
              E++ +    E+ ++ NE   K  MET  +  E  E+ K   E  +  +L  EK +L+S 
Sbjct:  1504 KEMMKK---LESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDI-KNLQHEKSDLISR 1559

Query:   724 A------VATXXXXXXXXXXXXXXXXHLRDETSRQQILISKSSKEFNDLKGNLTDALEQI 777
                    +                   ++ E +  Q  I  +++E   LK  L D   ++
Sbjct:  1560 INESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIEREL 1619

Query:   778 EQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERC 837
             +  + E+   +++ EL    L++  +E     Q          K     E R  A++ + 
Sbjct:  1620 KDKQAEIKSNQEEKELLTSRLKELEQELDSTQQ----------KAQKSEEERR-AEVRKF 1668

Query:   838 NFRLDSLSSQSKRLILKANVITRTGLSYKQKLE--RRCSDLQKAEAEVDLLGDEVDTLSG 895
                   L  ++  L  K N +     ++K+  +  ++ +D Q+ E  ++ L  E+D L  
Sbjct:  1669 QVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQE--IEKLAKELDNLKA 1726

Query:   896 LLEKIYIALDHYSSV 910
                K+  A +  S +
Sbjct:  1727 ENSKLKEANEDRSEI 1741

GO:0015031 "protein transport" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA;IDA

GO:0048193 "Golgi vesicle transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IDA

GO:0048211 "Golgi vesicle docking" evidence=IDA

GO:0035493 "SNARE complex assembly" evidence=IMP

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

MGI|MGI:2445022 A630007B06Rik "RIKEN cDNA A630007B06 gene" [Mus musculus (taxid:10090)]

 Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 116/558 (20%), Positives = 230/558 (41%)

Query:   373 FKAEMTKMKRIHELKVTEMTEDLFA-LKREYLKER---GSSLP--IKKDKEFDILRKKIP 426
             +  + T+ K I E+K    ++DL   ++ E L      G  +P  + K ++   L +K  
Sbjct:   159 YDTDCTR-KLISEMKTVSASDDLLGEIESELLSAEFAEGHQVPNGLNKGEQALALFEKC- 216

Query:   427 EVLSK-LDDILVENEKLPAFSENAEGLCNFKDXXXXXXXXXXXXXXXXTDKKNEVKRLSL 485
              V S+ L   L   + +     + E + N                       N +K+L L
Sbjct:   217 -VHSRYLQQELTVKQLIKENKNHQELILNICSEKDSLREELRKRTETEKQHMNTIKQLEL 275

Query:   486 KVSDTAEIMLQRSLTEENLVKRIGNLQGALDDAHIEAS--ITEGVYKCLLG---EAADFI 540
             ++    E+  +   +++ LV +    + A+   H E +  + +   KC      + A  +
Sbjct:   276 RIE---ELNKEIKASKDQLVAQDVTAKNAIQQIHKEMAQRMDQANKKCEEARQEKEAMVM 332

Query:   541 KSV-SKKSDLEYELMQEVYEIIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISE 599
             K V  +K  L+    +E  E    DA+         N +K++   +G L     E+   E
Sbjct:   333 KYVRGEKEALDLRKEKETLERKLRDASKELEK--NTNKIKQLSQEKGRLQQL-YESK--E 387

Query:   600 GVYKCLLREAVDSIKSVSEKSDLEYELMQ-EVYGIIFS-----DAAHNATPGSTCAFEDC 653
             G    L+RE ++ +K       ++ +  Q ++   + S     D     T   T A E+ 
Sbjct:   388 GETTRLIRE-IEKLKEEMNSQVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEA 446

Query:   654 DMESVIMQDLYEVIFREALKEAEVKLNELNQKYFM-ETELRRLEVAEKEKLKQETRLLSS 712
             +      QD+ +  ++E+    E+K NEL+ K  + + EL +    + ++L+     +  
Sbjct:   447 EQIRQNCQDMIKT-YQES---EEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKE 502

Query:   713 LVEEKENLVSEAVATXXXXXXXXXXXXXXXXHLRDETSRQQILISKSSKEFNDL--KGNL 770
             L E+ +    E +                     DE S+ + +I++   E  +L  K  +
Sbjct:   503 L-EDLKRTFKEGMDELRTLRTKAKCLEDERLRTEDELSKYREIINRQKSEIQNLLDKVKI 561

Query:   771 TDAL-EQIEQYKLEVHDLKQKLELA---MKELRDTNEETRKQVQLLVIFIQGLSKTVADF 826
             TD L EQ++  K E+  LK+++E     + +L+   E +RK+   L++F + L+   A  
Sbjct:   562 TDQLHEQLQSGKQEIEHLKEEMESLNSLINDLQKDIEGSRKRESELLLFTEKLTSKNAQL 621

Query:   827 ECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKL----ERRCSDLQKAEAE 882
             +  + A       ++D+LS    +L  +   + +   + + KL    E R  ++Q  +AE
Sbjct:   622 QSESSA----LQSQVDNLSCTESQLQSQCQQMGQANRNLESKLLKEEELRKEEVQTLQAE 677

Query:   883 VDLLGDEVDTLSGLLEKI 900
             +     EV  LS  +E++
Sbjct:   678 LSAAQTEVKALSTQVEEL 695

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

RGD|1307115 Cenpe "centromere protein E" [Rattus norvegicus (taxid:10116)]

 Score = 146 (56.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
 Identities = 144/638 (22%), Positives = 253/638 (39%)

Query:   204 LRTTLDTIFNCADNTVYLSKASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQS 263
             L+  L+ + N       + K  L Q   EK+   +++D  I N  R L       L  Q 
Sbjct:   355 LKKQLEEV-NTKTRAQEIEKDQLAQLLDEKDLLQKVQDEKIQNLKRMLVTSSSIAL-QQE 412

Query:   264 AQFYDNESLNW-LGKIKEISSLRE---ELNAISKSLSVSEIGHLTSHGSIEMGEE---WD 316
              +      + W  GK+K+ + ++E     N  +++   S +  L  +  +++GE    W+
Sbjct:   413 LEIKKKRRVTWCFGKMKDSNYVKEFKIPTNITTRTRKTS-VTPLRENSLMKLGESALSWE 471

Query:   317 TNKWTDHLHRKTSSNHVGVSTSPSEGNGKHDESIIVMSENLDSNLKHMSKEELVNHFKAE 376
             +  + + L     +     +   SE N + +    + S N   N   +  E+L    +  
Sbjct:   472 SEVFDNTLEPLAEAEWSSATALLSEENLESE----LTSLNTQYNNLVLDYEQLRRENEDL 527

Query:   377 MTKMKRIHELKVTEMTEDLFALKREY-LKERGSSLP--IKKDKEFDILRKKIPEVLSKLD 433
               K+K  +EL+  E  E      +E  L    S+L   IK  +E++   + +   LS   
Sbjct:   528 KLKLKEKNELEEFEFLEQREEKDQELQLMHEVSNLKNLIKHAEEYN---QDLENELSSKV 584

Query:   434 DILVENEKLPAFSENAEGLCNFKDXXXXXXXXXXXXXXX-XTDKKNEVKRLSLKVSDTAE 492
             ++L E E      +  + L  + D                 T+   +  R +L   DT  
Sbjct:   585 ELLKEKE------DQIKELQRYIDAQKSETTKTDLSYSSEATEDLKQAMR-TLSDLDTVA 637

Query:   493 IMLQRS---LTEENLV--KRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKS 547
             +  +R    L  ENL   +RI  L  +     +E  I   +Y+  L EA    K V  ++
Sbjct:   638 LDAKRESAFLRSENLELKERINELSDSCKQ--MENGIQ--MYQRQL-EAK---KQV--QA 687

Query:   548 DLEYELM---QEVYEI-IFSDAAHNATPLAEENLVKRIGNLQGALD-DANIEASISEGVY 602
             DLE EL    QE+ ++    D   N   L+   L KRI +LQ  L+ +   + ++ + V+
Sbjct:   688 DLEKELQLAFQEISKLSALVDGKVNIGLLSNLELEKRITDLQKELNKEVEEKETLQKEVH 747

Query:   603 -----KCLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDM-E 656
                  K L  E     + + EKS+ E  ++      +FS+ AH  +       E  +  +
Sbjct:   748 LLSELKSLPSEVETLRRELHEKSE-ELCVITTEREKLFSEMAHKDSRIQGLLEEIGNTKD 806

Query:   657 SVIMQDLYEVIFRE---ALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLS-S 712
              +    L +    E   ALK   V+L    ++   E+E  + EV     L +ET  L+ S
Sbjct:   807 DLAASQLSQRSSDEECQALKSLHVELKHRQEEVLEESERVKQEVGT---LSKETESLALS 863

Query:   713 LVEEKENLVSEAVATXXXXXXXXXXXXXXXXHLRDETSRQQILISKSSKEFNDLKGNLTD 772
             L       +S+                     LR++  R+   +  + KE N L   L  
Sbjct:   864 LDTVLSTYLSQKTQELAQKTAEGQEMLNQMEELREKLERRDSSLQSAEKEKNLLTEKLQQ 923

Query:   773 ALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQ 810
              LE++     E +DLKQ L+ +++  RD   + R  +Q
Sbjct:   924 TLEEVRALTQEKNDLKQ-LQESLQTERD---QLRSDIQ 957

GO:0000775 "chromosome, centromeric region" evidence=ISO

GO:0000776 "kinetochore" evidence=ISO

GO:0000778 "condensed nuclear chromosome kinetochore" evidence=ISO

GO:0000779 "condensed chromosome, centromeric region" evidence=ISO

GO:0000940 "condensed chromosome outer kinetochore" evidence=ISO

GO:0003777 "microtubule motor activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005874 "microtubule" evidence=IEA;ISO

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0007088 "regulation of mitosis" evidence=ISO

GO:0007094 "mitotic spindle assembly checkpoint" evidence=ISO

GO:0008608 "attachment of spindle microtubules to kinetochore" evidence=ISO

GO:0015630 "microtubule cytoskeleton" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0043515 "kinetochore binding" evidence=ISO

GO:0045184 "establishment of protein localization" evidence=ISO

GO:0045842 "positive regulation of mitotic metaphase/anaphase transition" evidence=ISO

GO:0045860 "positive regulation of protein kinase activity" evidence=ISO

GO:0050793 "regulation of developmental process" evidence=ISO

GO:0051984 "positive regulation of chromosome segregation" evidence=ISO

GO:0051987 "positive regulation of attachment of spindle microtubules to kinetochore" evidence=ISO

TAIR|locus:2147800 AT5G14990 "AT5G14990" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
 Identities = 34/108 (31%), Positives = 58/108 (53%)

Query:   825 DFECRAVADIERCNFRLDSLSSQ-SKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEV 883
             DF+ +    ++   FRL +L  +    +   A +  R  + Y+     R  +L+KAE EV
Sbjct:   558 DFDFKIQEKLKMVTFRLQNLEIKIDSTMDFIAELRQRESV-YRTAFVLRSENLRKAETEV 616

Query:   884 DLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELSGE 931
             DLLGD+VD+L  LL+K       +  +L +   I+EI +++++EL  E
Sbjct:   617 DLLGDQVDSLVKLLQKTLWTFHQHPLLLCNNSDILEISKMIKKELLSE 664

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q9X0R4 smc "Chromosome partition protein Smc" [Thermotoga maritima MSB8 (taxid:243274)]

 Score = 110 (43.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
 Identities = 118/536 (22%), Positives = 221/536 (41%)

Query:   109 SEPFQSLVMKHESGSVKHGSYSSLSDYDKIGESVGGLKNVAKEQLKNLRKEIDRIKGCSS 168
             SE F  +    E+      +Y  L  +++ GE +     VA+E LK   +    + G S 
Sbjct:    59 SEKFDMIFAGSENLPPAGSAYVELV-FEENGEEI----TVARE-LKRTGENTYYLNG-SP 111

Query:   169 LRRIGSGSEMVGLG-GILQDKVSDIRWMDVDKALDSLRTTLDTIFN-CADNTVYLSKASL 226
             +R         G G G+  D  S +    +D+ +++    L  +    A  ++Y  K   
Sbjct:   112 VRLKDIRDRFAGTGLGV--DFYSIVGQGQIDRIVNASPEELRLLLEEAAGVSIYREKKKE 169

Query:   227 CQWQQE--KEFQGEIEDMVIMN--CFRSL--KEEFEERLCDQSAQFYDNESLNWLGKI-- 278
              +   E  K     ++D++       +SL  K +  ER  + +AQ  + + + + G +  
Sbjct:   170 TELNLERTKANLDRVKDVLFERERQMKSLYLKAKRAERFKEYTAQLEELQKI-YYGNVLK 228

Query:   279 ---KEISSLREELNAISKSLS--VSEIGHLTSHGSI---EMGE-EWDTNKWTDHL--HRK 327
                K++   +EE    ++ +     E+  L +  S    E GE + +  ++T  L  ++K
Sbjct:   229 RERKKLEFYQEEEKKTNEKIKNIQKELVELETKWSTLRSEFGEMDQEIERYTKLLEDYKK 288

Query:   328 TSSNHVGVSTSPSEGNGKHDESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELK 387
               ++ V +    S      +   + +S  LD   K   +EE    +K  + +M+ I +  
Sbjct:   289 RQNDLVEMKGFYSSKLADSENKYVELSTRLDELEKR--REE----YKKRLEEMEYIFKGV 342

Query:   388 VTEMTEDLFALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLD-DIL-VENEKLPAF 445
             + +       L++ + KE+ + L    DKE + LR  + + +SKL+  IL +ENE L   
Sbjct:   343 MGDYERKAKELEK-FEKEKENLLSRFNDKEKEFLR--VRDEISKLEKQILKLENELL-RI 398

Query:   446 SENAEGLCNFKDXXXXXXXXXXXXXXXXTDKKNEVKRLSLKVSDTAEIMLQRSLTEE-NL 504
              E  E L   +                  DKKNE K +S +V +  E   ++ LTEE N 
Sbjct:   399 GETLEDL---EKRRKITENQILTRRRELEDKKNEFKEISRRVEELDEE--EKKLTEELNA 453

Query:   505 VK-RIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFS 563
             V+ R+  ++G +   ++E    E   K L      F K + ++   EY         +F 
Sbjct:   454 VRERLEEIEGEIRRVNLEIDAKE---KRL--REIQFEKEMIERDMREYRGFSRAVRAVFE 508

Query:   564 DAAHNATPLAEENLVKRIGNLQGALDDANIEASIS-EGVYKCLLREAVDSIKSVSE 618
             +      P     LV  + NL    +  ++  S+   G  + ++   VD+ K++ E
Sbjct:   509 EKER--FP----GLVDVVSNLIEVDEKYSLAVSVLLGGTAQNIVVRNVDTAKAIVE 558

GO:0042802 "identical protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O64584	WAP_ARATH	No assigned EC number	0.3783	0.8290	0.9406	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00029749001 SubName- Full=Chromosome chr10 scaffold_50, whole genome shotgun sequence; (943 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	936
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-05
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	4e-05
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-04
pfam04156	186	pfam04156, IncA, IncA protein	2e-04
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.002
TIGR02169	1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.002

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 49.3 bits (118), Expect = 1e-05
 Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 18/254 (7%)

Query: 661 QDLYEVIFREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENL 720
           ++L   +    LKE   +L EL ++     E       E E+ ++E   L S +EE    
Sbjct: 223 RELELALLLAKLKELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREE 282

Query: 721 VSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQY 780
           + E    LLE K+  + L  E+S LR+   R + L ++  +    L+  L + +E +++ 
Sbjct: 283 LEELQEELLELKEEIEELEGEISLLRE---RLEELENELEELEERLE-ELKEKIEALKEE 338

Query: 781 KLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFR 840
             E   L ++LE  + EL +  EE              L + ++          E     
Sbjct: 339 LEERETLLEELEQLLAELEEAKEE--------------LEEKLSALLEELEELFEALREE 384

Query: 841 LDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKI 900
           L  L ++   +  +   + R   S +++LER    L+  + E+  L  E++ L   LE++
Sbjct: 385 LAELEAELAEIRNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELEEL 444

Query: 901 YIALDHYSSVLQHY 914
              L+     L+  
Sbjct: 445 NEELEELEEQLEEL 458

Length = 1163

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 47.4 bits (113), Expect = 4e-05
 Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 16/242 (6%)

Query: 669 REALKEAEVKLNELNQKYFM-ETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVAT 727
            E ++E E K+ EL +       EL  LE  E E+L++E   LS  +      ++   A 
Sbjct: 683 EEKIEELEEKIAELEKALAELRKELEELE-EELEQLRKELEELSRQISALRKDLARLEAE 741

Query: 728 LLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDL 787
           + + ++    LS+EL+ L  E    +  + ++ +E  + +  + +   QIEQ K E+  L
Sbjct: 742 VEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKAL 801

Query: 788 KQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAV----------ADIERC 837
           ++ L+    EL   NEE     + L    + L + +A  E R             DIE  
Sbjct: 802 REALDELRAELTLLNEEAANLRERL----ESLERRIAATERRLEDLEEQIEELSEDIESL 857

Query: 838 NFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLL 897
              ++ L    + L  +   +     S ++ L    S+L++   E+  L  +   L   L
Sbjct: 858 AAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRREL 917

Query: 898 EK 899
           E+
Sbjct: 918 EE 919

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 44.7 bits (106), Expect = 2e-04
 Identities = 44/224 (19%), Positives = 84/224 (37%), Gaps = 23/224 (10%)

Query: 668  FREALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVAT 727
             +E L+E E +L E  ++              +E+L+QE   L   +EE E  + E    
Sbjct: 791  LQEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIEELEEKLDELEEE 850

Query: 728  LLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDL 787
            L E +   + L +EL  L  E    +  + +  +E  +L+  L +   ++ + K E+  L
Sbjct: 851  LEELEKELEELKEELEELEAEKEELEDELKELEEEKEELEEELRELESELAELKEEIEKL 910

Query: 788  KQKLELAMKELRDTNE-------------------ETRKQVQLLVIFIQGLSKTVADFEC 828
            +++LE    +L                        E  ++++ L   I+ L         
Sbjct: 911  RERLEELEAKLERLEVELPELEEELEEEYEDTLETELEREIERLEEEIEALG----PVNL 966

Query: 829  RAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERR 872
            RA+ + E    R + L SQ + L      +        ++   R
Sbjct: 967  RAIEEYEEVEERYEELKSQREDLEEAKEKLLEVIEELDKEKRER 1010

Length = 1163

>gnl|CDD|217933 pfam04156, IncA, IncA protein

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 26/118 (22%), Positives = 57/118 (48%), Gaps = 1/118 (0%)

Query: 710 LSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGN 769
           L  L+ +              + +LS+ L Q+LS L++E    +  I++   E  DLK +
Sbjct: 57  LLCLLLKAPVQSVRPQKLEELQGELSE-LKQQLSELQEELEDLEERIAELESELEDLKED 115

Query: 770 LTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFE 827
           L    E ++  +  +  L++ ++   KELR+  ++ R++V+ L   ++ L + +   +
Sbjct: 116 LQLLRELLKSLEERLESLEESIKELAKELRELRQDLREEVEELREELERLQENLQRLQ 173

Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is non-fusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA, is functionally associated with the homotypic fusion of inclusions. This family probably includes members of the wider Inc family rather than just IncA. Length = 186

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 41.6 bits (98), Expect = 0.002
 Identities = 47/245 (19%), Positives = 99/245 (40%), Gaps = 18/245 (7%)

Query: 669 REALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATL 728
           +E L+E E +L  L +      E       +++ L++E   L   +EE E  +      L
Sbjct: 757 QERLEELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALEREL 816

Query: 729 LEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLK 788
              +   + L QE+  L +E    +  + +  +E  +L+  L +  E++E+ + E    K
Sbjct: 817 ESLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAE----K 872

Query: 789 QKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQS 848
           ++LE  +KEL +  EE  ++++ L   +  L + +     R      +   RL+    + 
Sbjct: 873 EELEDELKELEEEKEELEEELRELESELAELKEEIEKLRERLEELEAKLE-RLEVELPEL 931

Query: 849 KRLILKANVITRTGLSYK--QKLERRCSDL-----------QKAEAEVDLLGDEVDTLSG 895
           +  + +    T      +  ++LE     L           ++ E   + L  + + L  
Sbjct: 932 EEELEEEYEDTLETELEREIERLEEEIEALGPVNLRAIEEYEEVEERYEELKSQREDLEE 991

Query: 896 LLEKI 900
             EK+
Sbjct: 992 AKEKL 996

Length = 1163

>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type

 Score = 41.6 bits (98), Expect = 0.002
 Identities = 47/275 (17%), Positives = 106/275 (38%), Gaps = 19/275 (6%)

Query: 669 REALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATL 728
            +  +E E     L +K  +E +   +E  +   L++E   L+  + E E  + E    L
Sbjct: 217 LKEKREYEGYE-LLKEKEALERQKEAIE-RQLASLEEELEKLTEEISELEKRLEEIEQLL 274

Query: 729 LE-EKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDL 787
            E  K +     +E   ++++    +  I+   +   + +  L DA E++ + + E+  L
Sbjct: 275 EELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKL 334

Query: 788 KQKLELAMKELRDTN----------EETRKQVQLLVIFIQGLSKTVA---DFECRAVADI 834
             ++E   +E+ +             E +++++ L   ++ + K  A   D        +
Sbjct: 335 LAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKL 394

Query: 835 ERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLS 894
           E+    ++ L  +  RL  +   ++         +    + + + E E +    E+    
Sbjct: 395 EKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQE 454

Query: 895 GLLEKIYIALDHYSSVLQHYPGIMEILRLVRRELS 929
             LE++   L  Y    Q    + E    V +ELS
Sbjct: 455 WKLEQLAADLSKYE---QELYDLKEEYDRVEKELS 486

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	936
TIGR00606	1311	rad50 rad50. This family is based on the phylogeno	95.21
KOG0161	1930	consensus Myosin class II heavy chain [Cytoskeleto	94.06
TIGR02169	1164	SMC_prok_A chromosome segregation protein SMC, pri	93.59
PRK04778	569	septation ring formation regulator EzrA; Provision	92.48
TIGR00606	1311	rad50 rad50. This family is based on the phylogeno	90.44
PF12128	1201	DUF3584: Protein of unknown function (DUF3584); In	89.09
PF05483	786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	89.0
PF00261	237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	86.94
TIGR02169	1164	SMC_prok_A chromosome segregation protein SMC, pri	85.57
TIGR02168	1179	SMC_prok_B chromosome segregation protein SMC, com	84.91
COG1196	1163	Smc Chromosome segregation ATPases [Cell division	83.44
KOG4674	1822	consensus Uncharacterized conserved coiled-coil pr	82.85
PF05483	786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	82.71

>TIGR00606 rad50 rad50

Probab=95.21  E-value=15  Score=47.85  Aligned_cols=73  Identities=11%  Similarity=0.141  Sum_probs=56.3

Q ss_pred             HHhhhhhhhhHHhhHHHHHHHHHHhhhhhHHHHHHHHhhhHHHHhHHHHhhccchHHHHHHHHHHHHHHhhcccch
Q 002325          835 ERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSV  910 (936)
Q Consensus       835 e~n~~Rle~L~~Q~~~Lv~qa~~Lkkk~l~YKq~le~RcsnLqKAEaEVDLLGDeVd~LLsLLeKIYiALDHYSPV  910 (936)
                      .....++..+..++.|+...   +.+....|.+...++....+++..+|+-+...|+.|-.+...|---++.-.|-
T Consensus       898 ~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~y~~~~~~~  970 (1311)
T TIGR00606       898 QSLIREIKDAKEQDSPLETF---LEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDD  970 (1311)
T ss_pred             HHHHHHHHHHHHHhhhhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence            44556667777888888777   55556678888888888999999999999999999999999995444443443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]

Probab=94.06  E-value=34  Score=46.75  Aligned_cols=184  Identities=18%  Similarity=0.221  Sum_probs=106.2

Q ss_pred             HHHHHHHHHHHHHHHhhhHHHHHhhHHH---HHHHHHHHhhcCCCCCCccccccHHHhhhHHHHHHhHHHHHhhcCCCCc
Q 002325          368 ELVNHFKAEMTKMKRIHELKVTEMTEDL---FALKREYLKERGSSLPIKKDKEFDILRKKIPEVLSKLDDILVENEKLPA  444 (936)
Q Consensus       368 eli~yfk~em~KMkR~HEs~lqeKTEEl---F~lKrE~lkerGsSl~lrkdkEfe~lRKKIpeVIsKLD~Ii~~n~klp~  444 (936)
                      +=+..+-..+..||+.|.-.+.+.++.+   .+.|....++++            .+..-+-++...+++..+....+.-
T Consensus      1171 ee~~~~e~~~~~lr~~~~~~~~el~~qle~l~~~k~~lekek~------------~lq~e~~~l~~ev~~~~~~k~~~e~ 1238 (1930)
T KOG0161|consen 1171 EETLDHEAQIEELRKKHADSLAELQEQLEQLQKDKAKLEKEKS------------DLQREIADLAAELEQLSSEKKDLEK 1238 (1930)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHhhhhccHHH
Confidence            3445567778899999988877776554   455555545543            2444455666666666666655432


Q ss_pred             cccccccccCchhhhhHHHhhhhhhhh-------hhhhhHHHhhhhhhhhchhHHHHHhhhhhHHHHHHHHHhhhhhhhh
Q 002325          445 FSENAEGLCNFKDRLESLLLENRQLRS-------LLTDKKNEVKRLSLKVSDTAEIMLQRSLTEENLVKRIGNLQGALDD  517 (936)
Q Consensus       445 f~~~~~~~~~l~dR~~sl~~EN~qLrd-------lladk~kevk~LS~qvSdA~~k~sq~~~~Ee~L~~qI~kL~~d~ED  517 (936)
                      ++..      +..++-.+......+.+       -.+-.+++...|+.|+.++..+.++-+-....+..||+.++..+++
T Consensus      1239 ~~k~------~E~~l~elq~k~~~~~~~~~~l~~q~~~l~~E~~~l~~~lee~e~~~~~~~r~~~~~~~qle~~k~qle~ 1312 (1930)
T KOG0161|consen 1239 KDKK------LEAQLSELQLKLDEQERLRNDLTAKRSRLQNENEELSRQLEEAEAKLSALSRDKQALESQLEELKRQLEE 1312 (1930)
T ss_pred             HHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2211      11233333222222222       2455678889999999999999999999999999999999888876


Q ss_pred             hhhHHHHHhHHHHhhhhhhhhhhhhccccchhHHHHHHHHHHHHHhhhhhccCchh
Q 002325          518 AHIEASITEGVYKCLLGEAADFIKSVSKKSDLEYELMQEVYEIIFSDAAHNATPLA  573 (936)
Q Consensus       518 ~~IE~~IrE~VYkc~lre~~~~~~~~~e~~~le~~~~~eiy~ii~~eA~~~~~~~~  573 (936)
                      -.=+.+=...-    ++-+-.+.+..-+..+-+-+-+.+++.-+-.-.+..+....
T Consensus      1313 e~r~k~~l~~~----l~~l~~e~~~l~e~leee~e~~~~l~r~lsk~~~e~~~~~~ 1364 (1930)
T KOG0161|consen 1313 ETREKSALENA----LRQLEHELDLLREQLEEEQEAKNELERKLSKANAELAQWKK 1364 (1930)
T ss_pred             HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            43322211110    11123334444455555555555555554444444333333

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type

Probab=93.59  E-value=25  Score=43.79  Aligned_cols=8  Identities=13%  Similarity=0.418  Sum_probs=4.3

Q ss_pred             hccccccc
Q 002325          160 IDRIKGCS  167 (936)
Q Consensus       160 i~~~~~~~  167 (936)
                      |.++++|.
T Consensus         7 l~nf~s~~   14 (1164)
T TIGR02169         7 LENFKSFG   14 (1164)
T ss_pred             EeCeeeEC
Confidence            45555555

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.

>PRK04778 septation ring formation regulator EzrA; Provisional

Probab=92.48  E-value=29  Score=41.46  Aligned_cols=145  Identities=18%  Similarity=0.274  Sum_probs=88.4

Q ss_pred             hhHHHHhhhhhhhHhHhHhhhhcccccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhHHH---HHHHHHHHH
Q 002325          737 SLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEE---TRKQVQLLV  813 (936)
Q Consensus       737 lv~qel~~Lr~~~~~q~~lise~~~e~~~~~~~l~~aleqi~~~K~el~~L~~~L~~~s~~LkE~~~e---~~kQLesil  813 (936)
                      ....++..+......-..-+.+....|+.+...+.+..+++...+.+..++...+......-.++.++   .++.+..+=
T Consensus       352 ~lekeL~~Le~~~~~~~~~i~~~~~~ysel~e~leel~e~leeie~eq~ei~e~l~~Lrk~E~eAr~kL~~~~~~L~~ik  431 (569)
T PRK04778        352 QLEKQLESLEKQYDEITERIAEQEIAYSELQEELEEILKQLEEIEKEQEKLSEMLQGLRKDELEAREKLERYRNKLHEIK  431 (569)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445555555444444556777777888888888888888777777777777776666665555554   233332221


Q ss_pred             ----H-HHHhHHHHHHHHHHHH---------------------HHhHHHhhhhhhhhHHhhHHHHHHHHHHh---hhhhH
Q 002325          814 ----I-FIQGLSKTVADFECRA---------------------VADIERCNFRLDSLSSQSKRLILKANVIT---RTGLS  864 (936)
Q Consensus       814 ----v-si~~lsk~f~dfE~~v---------------------~~kle~n~~Rle~L~~Q~~~Lv~qa~~Lk---kk~l~  864 (936)
                          . .++++...|.+.-..+                     ...++....|+..|..|...|+..+..+.   ..+-+
T Consensus       432 r~l~k~~lpgip~~y~~~~~~~~~~i~~l~~~L~~g~VNm~ai~~e~~e~~~~~~~L~~q~~dL~~~a~~lE~~Iqy~nR  511 (569)
T PRK04778        432 RYLEKSNLPGLPEDYLEMFFEVSDEIEALAEELEEKPINMEAVNRLLEEATEDVETLEEETEELVENATLTEQLIQYANR  511 (569)
T ss_pred             HHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                1 1233333333333322                     22445577899999999999999887765   23555


Q ss_pred             HHHHHHHhhhHHHHhHH
Q 002325          865 YKQKLERRCSDLQKAEA  881 (936)
Q Consensus       865 YKq~le~RcsnLqKAEa  881 (936)
                      |+..+..=-.++++||.
T Consensus       512 fr~~~~~V~~~f~~Ae~  528 (569)
T PRK04778        512 YRSDNEEVAEALNEAER  528 (569)
T ss_pred             cCCCCHHHHHHHHHHHH
Confidence            66566666666777765

>TIGR00606 rad50 rad50

Probab=90.44  E-value=71  Score=41.97  Aligned_cols=56  Identities=16%  Similarity=0.244  Sum_probs=33.1

Q ss_pred             hHHHHHHHHhhhHHHHhHHHHhhccchHHHHHHHHHHHHHHhhcccchhhcCccHHHHHHHHHHHh
Q 002325          863 LSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVLQHYPGIMEILRLVRREL  928 (936)
Q Consensus       863 l~YKq~le~RcsnLqKAEaEVDLLGDeVd~LLsLLeKIYiALDHYSPVLQhYpGI~Eil~likkeL  928 (936)
                      .-||.+-++...-+-++++        ...-.+=|.|-|.|||.  .+.+.|.-=|+=+|-|=++|
T Consensus      1094 ~~yk~a~~ryrka~i~~~~--------~~~~~~d~~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~ 1149 (1311)
T TIGR00606      1094 PQFRDAEEKYREMMIVMRT--------TELVNKDLDIYYKTLDQ--AIMKFHSMKMEEINKIIRDL 1149 (1311)
T ss_pred             hHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence            4566666666555555554        22334457888888885  56665555555555554444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins

Probab=89.09  E-value=86  Score=40.98  Aligned_cols=68  Identities=10%  Similarity=0.123  Sum_probs=46.4

Q ss_pred             hhhhhHHhhHHHHHHHHHHhhhhhHHHHHHHHhhhHHHHhHHHHhhccchHHHHHHHHHHHHHHhhcc
Q 002325          840 RLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHY  907 (936)
Q Consensus       840 Rle~L~~Q~~~Lv~qa~~Lkkk~l~YKq~le~RcsnLqKAEaEVDLLGDeVd~LLsLLeKIYiALDHY  907 (936)
                      +--.+..++..+-++...+...--..++.+.+++..+.+.-.-++-.-.+.+..+.-|......+.++
T Consensus       817 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~  884 (1201)
T PF12128_consen  817 EKPELEEQLRDLEQELQELEQELNQLQKEVKQRRKELEEELKALEEQLEQLEEQLRRLRDLLEKLAEL  884 (1201)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence            44455666666666666666666666667777777777777777777777777777777777777665

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex

Probab=89.00  E-value=70  Score=39.85  Aligned_cols=143  Identities=18%  Similarity=0.241  Sum_probs=93.2

Q ss_pred             hhhhhhhHHHHhhhhhhhHhHhHhhhhcccccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 002325          732 KDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQL  811 (936)
Q Consensus       732 ~~~~elv~qel~~Lr~~~~~q~~lise~~~e~~~~~~~l~~aleqi~~~K~el~~L~~~L~~~s~~LkE~~~e~~kQLes  811 (936)
                      ..++..+.-.++.||-++..-...|-+--.+-..++-.+..-..+...|...|++|...+..+-.-..|+.+.+.+-+++
T Consensus       586 ~kq~k~lenk~~~LrKqvEnk~K~ieeLqqeNk~LKKk~~aE~kq~~~~eikVn~L~~E~e~~kk~~eE~~~~~~keie~  665 (786)
T PF05483_consen  586 EKQMKILENKCNNLRKQVENKNKNIEELQQENKALKKKITAESKQSNVYEIKVNKLQEELENLKKKHEEETDKYQKEIES  665 (786)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            33455555556666665544444444434444455556666677888888999999988887766666776667777776


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHhHHHhhhhhhhhHHhhHHHHHHHHHHhhhhhHHHHHHHHhhhHHH
Q 002325          812 LVIFIQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQ  877 (936)
Q Consensus       812 ilvsi~~lsk~f~dfE~~v~~kle~n~~Rle~L~~Q~~~Lv~qa~~Lkkk~l~YKq~le~RcsnLq  877 (936)
                      =-++=.+|...+.....++.+-++  ..+=.+++||- -++.-|+..-+--.-|-+|++-|-+.|-
T Consensus       666 K~~~e~~L~~EveK~k~~a~EAvK--~q~EtdlrCQh-KIAeMVALMEKHK~qYDkiVEEkDaEL~  728 (786)
T PF05483_consen  666 KSISEEELLGEVEKAKLTADEAVK--LQEETDLRCQH-KIAEMVALMEKHKHQYDKIVEEKDAELG  728 (786)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            555667777777776666665333  12233455553 2446667778888899999999988874

Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase [].; GO: 0007130 synaptonemal complex assembly, 0000795 synaptonemal complex

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells

Probab=86.94  E-value=47  Score=35.46  Aligned_cols=69  Identities=16%  Similarity=0.268  Sum_probs=28.8

Q ss_pred             hhhhhhhHHHHhhhhhhhHhHhHhhhhcccccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhh
Q 002325          732 KDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRD  800 (936)
Q Consensus       732 ~~~~elv~qel~~Lr~~~~~q~~lise~~~e~~~~~~~l~~aleqi~~~K~el~~L~~~L~~~s~~LkE  800 (936)
                      -+.++.+-.++...+.....-+.-..+-.+-+.++-+.++.+-+........+..|...|..+.+.|+.
T Consensus        91 eeri~~lE~~l~ea~~~~ee~e~k~~E~~rkl~~~E~~Le~aEeR~e~~E~ki~eLE~el~~~~~~lk~  159 (237)
T PF00261_consen   91 EERIEELEQQLKEAKRRAEEAERKYEEVERKLKVLEQELERAEERAEAAESKIKELEEELKSVGNNLKS  159 (237)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Confidence            334444444444444333333332333333334444444444444444444444444444444444443

In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].; PDB: 2EFR_A 2Z5H_C 2Z5I_D 2D3E_B 2EFS_D 3U59_B 1C1G_C 1IHQ_A 3AZD_B 1MV4_B ....

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type

Probab=85.57  E-value=1.1e+02  Score=38.44  Aligned_cols=13  Identities=23%  Similarity=0.230  Sum_probs=4.8

Q ss_pred             HHhHHHHhhccch
Q 002325          877 QKAEAEVDLLGDE  889 (936)
Q Consensus       877 qKAEaEVDLLGDe  889 (936)
                      .+..++..-+.++
T Consensus       472 ~~~~~~l~~l~~~  484 (1164)
T TIGR02169       472 YDLKEEYDRVEKE  484 (1164)
T ss_pred             HHHHHHHHHHHHH
Confidence            3333333333333

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type

Probab=84.91  E-value=1.1e+02  Score=38.07  Aligned_cols=36  Identities=14%  Similarity=0.180  Sum_probs=19.2

Q ss_pred             chhhhhHHHhhhhhhhhhhhhhHHHhhhhhhhhchh
Q 002325          455 FKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDT  490 (936)
Q Consensus       455 l~dR~~sl~~EN~qLrdlladk~kevk~LS~qvSdA  490 (936)
                      +..++......-..+.|.+......++.|..|+..|
T Consensus       170 ~~~~~~~t~~nL~r~~d~l~el~~ql~~L~~q~~~a  205 (1179)
T TIGR02168       170 YKERRKETERKLERTRENLDRLEDILNELERQLKSL  205 (1179)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444444445555566666655555555555544

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]

Probab=83.44  E-value=1.6e+02  Score=38.50  Aligned_cols=59  Identities=25%  Similarity=0.287  Sum_probs=43.8

Q ss_pred             HHHhhhhhhhhHHhhHHHHHHHHHHhhhhhHHHHHHHHhhhHHHHhHHHHhhccchHHH
Q 002325          834 IERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDT  892 (936)
Q Consensus       834 le~n~~Rle~L~~Q~~~Lv~qa~~Lkkk~l~YKq~le~RcsnLqKAEaEVDLLGDeVd~  892 (936)
                      ++.....+..+..++..+.....-+.+.=.+++..+......++.+++..|-|.....+
T Consensus       441 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~  499 (1163)
T COG1196         441 LEELNEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEARLDRLEAEQRA  499 (1163)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            44566667777778888777777777777777888888888888888877776665554

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]

Probab=82.85  E-value=2.1e+02  Score=39.50  Aligned_cols=136  Identities=29%  Similarity=0.306  Sum_probs=90.3

Q ss_pred             ccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh-------H
Q 002325          762 EFNDLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVAD-------I  834 (936)
Q Consensus       762 e~~~~~~~l~~aleqi~~~K~el~~L~~~L~~~s~~LkE~~~e~~kQLesilvsi~~lsk~f~dfE~~v~~k-------l  834 (936)
                      .......++..|+.++..|+.....+-+.|..+-..+-++..+....++..-..+..+-.-.++++..+...       .
T Consensus       913 q~~~l~~~L~~a~s~i~~yqe~~~s~eqsl~~~ks~lde~~~~~ea~ie~~~~k~tslE~~ls~L~~~~~~l~~e~~~~~  992 (1822)
T KOG4674|consen  913 EITDLKEELTDALSQIREYQEEYSSLEQSLESVKSELDETRLELEAKIESLHKKITSLEEELSELEKEIENLREELELST  992 (1822)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            344578899999999999999998888888888888888777766666666555555555555555555432       3


Q ss_pred             HHhhhhhhhhHHhhHHHHHHHHHHhhhhhHHHHHHHHhhhHHH-------Hh----HHHHhhccchHHHHHHHH
Q 002325          835 ERCNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQ-------KA----EAEVDLLGDEVDTLSGLL  897 (936)
Q Consensus       835 e~n~~Rle~L~~Q~~~Lv~qa~~Lkkk~l~YKq~le~RcsnLq-------KA----EaEVDLLGDeVd~LLsLL  897 (936)
                      +..+.++.+++.+.+++-...-.+.....-|-..+.+-..+|.       +|    |-++-.+||-+.+|..|=
T Consensus       993 k~~e~~~~~~~~e~~sl~ne~~~~~~~~s~~~~~~~~~k~dl~~~~~~~~~a~~~Ye~el~~ha~~~q~l~kl~ 1066 (1822)
T KOG4674|consen  993 KGKEDKLLDLSREISSLQNELKSLLKAASQANEQIEDLQNDLKTETEQLRKAQSKYESELVQHADLTQKLIKLR 1066 (1822)
T ss_pred             cchhhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4456667777777777776666666666555555544444443       33    445666777666655543

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex

Probab=82.71  E-value=1.4e+02  Score=37.42  Aligned_cols=144  Identities=24%  Similarity=0.255  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHhhhhhhhHhHhHhhhhcccccccccccHHHHHHHHHH
Q 002325          700 KEKLKQETRLLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQ  779 (936)
Q Consensus       700 ~eKlk~~i~~l~sLv~EKE~lv~~a~~~l~~~~~~~elv~qel~~Lr~~~~~q~~lise~~~e~~~~~~~l~~aleqi~~  779 (936)
                      ..|.++ +..|-.-..+|++-+......|.+       -+..++.|-+.+-.|+.++.++..+-+.+...|+.+=.-...
T Consensus       236 n~kEkq-vs~L~~q~~eKen~~kdl~~~l~e-------s~~~~~qLeE~~~~q~E~Lkes~~~qe~L~~eL~~~K~slq~  307 (786)
T PF05483_consen  236 NDKEKQ-VSLLQTQLKEKENKIKDLLLLLQE-------SQDKCNQLEEKTKEQHENLKESNEEQEHLLQELEDIKQSLQE  307 (786)
T ss_pred             hhHHHH-HHHHHHHHHhhHhHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHH
Confidence            444444 334444557999999999985443       444567788888889998888888888888888766665666


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH---hHHHhhhhhhhhHHhhHHH
Q 002325          780 YKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECRAVA---DIERCNFRLDSLSSQSKRL  851 (936)
Q Consensus       780 ~K~el~~L~~~L~~~s~~LkE~~~e~~kQLesilvsi~~lsk~f~dfE~~v~~---kle~n~~Rle~L~~Q~~~L  851 (936)
                      +...-..|...|.+++..+-.+..+...||+-.=..-..-+-.+++|++++|.   -+..-..|++.+.+|++.+
T Consensus       308 ~~~tq~~le~~lq~~~k~~~qlt~eKe~~~Ee~nk~k~~~s~~v~e~qtti~~L~~lL~~Eqqr~~~~ed~lk~l  382 (786)
T PF05483_consen  308 SESTQKALEEDLQQATKTLIQLTEEKEAQMEELNKAKAQHSFVVTELQTTICNLKELLTTEQQRLKKNEDQLKIL  382 (786)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            65566777777888877776666665555443322223334445555555554   2223334555555555444

Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase [].; GO: 0007130 synaptonemal complex assembly, 0000795 synaptonemal complex

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	936
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-18
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	5e-11
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	6e-08
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	3e-07
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	1e-05
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-07
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-06
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	5e-06
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	4e-05
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 90.3 bits (223), Expect = 2e-18
 Identities = 108/698 (15%), Positives = 218/698 (31%), Gaps = 201/698 (28%)

Query: 184 ILQDKVSD-IRWMDVDKALDSLRTTL-----DTIFNCAD--NTVYLSKASLCQWQQE--K 233
           IL       +   D     D  ++ L     D I    D  +       +L   Q+E  +
Sbjct: 21  ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80

Query: 234 EFQGEIEDM---VIMNCFRS-------LKEEFEE---RLCDQSAQFYDNESLNWLGKIKE 280
           +F  E+  +    +M+  ++       +   + E   RL +   Q +   +++   +++ 
Sbjct: 81  KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN-DNQVFAKYNVS---RLQP 136

Query: 281 ISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKTSSNHVGVSTSPS 340
              LR+ L      L +    ++   G   +     + K    +      ++        
Sbjct: 137 YLKLRQAL------LELRPAKNVLIDG---VL---GSGKTW--VALDVCLSYKVQCKMDF 182

Query: 341 E------GNGKHDESIIVMSENLDSNLKHMSKEELVNHFKAEMTKMKRIHELKVTEMTED 394
           +       N    E+++ M + L   +         +    ++    RIH ++       
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL----RIHSIQ------- 231

Query: 395 LFALKREYLKERG--SSLPIKKD-------KEFD----IL---RKKIPEVLSKLDDILVE 438
             A  R  LK +   + L +  +         F+    IL   R K        D +   
Sbjct: 232 --AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK-----QVTDFLSAA 284

Query: 439 NEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAEIMLQRS 498
                +   ++  L    D ++SLLL                K L  +  D         
Sbjct: 285 TTTHISLDHHSMTLT--PDEVKSLLL----------------KYLDCRPQD--------- 317

Query: 499 LTEENLVKRIGNLQGALDDAHIEASITEGV-----YKCLLGEAADFIKSVSKKS--DLEY 551
           L  E  V      + ++    I  SI +G+     +K +  +    + ++ + S   LE 
Sbjct: 318 LPRE--VLTTNPRRLSI----IAESIRDGLATWDNWKHVNCDK---LTTIIESSLNVLEP 368

Query: 552 ELMQEVYE--IIFSDAAHNATPLAEENLVKRIGNLQGALDDANIEASISEGVYKCLL-RE 608
              +++++   +F  +AH   P         +  +   +  +++   +++     L+ ++
Sbjct: 369 AEYRKMFDRLSVFPPSAH--IPT------ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 609 AVDSIKSV-------SEKSDLEYEL---MQEVYGIIFSDAAHNATPGSTCAFEDCDMESV 658
             +S  S+         K + EY L   + + Y I                F D D    
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNI-------------PKTF-DSDDLIP 466

Query: 659 IMQDLYEVIFREA---LKEAEV--KLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSL 713
              D Y   +      LK  E   ++      +    + R LE    +K++ ++      
Sbjct: 467 PYLDQY--FYSHIGHHLKNIEHPERMTLFRMVFL---DFRFLE----QKIRHDSTAW--- 514

Query: 714 VEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDA 773
                N     + TL     L                     I  +  ++  L   + D 
Sbjct: 515 -----NASGSILNTLQ---QLKFYKPY---------------ICDNDPKYERLVNAILDF 551

Query: 774 LEQIEQYKLEVHDLKQKLELA-MKELRDTNEETRKQVQ 810
           L +IE+  L        L +A M E     EE  KQVQ
Sbjct: 552 LPKIEE-NLICSKYTDLLRIALMAEDEAIFEEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 74.9 bits (183), Expect = 1e-13
 Identities = 88/545 (16%), Positives = 170/545 (31%), Gaps = 165/545 (30%)

Query: 434 DILVENEKLPAFSENAEGLCNFKDRLESLLLENRQLRSLLTDKKNEVKRLSLKVSDTAE- 492
           DIL   E   AF +N +     KD  +         +S+L+ +  E+  + +   D    
Sbjct: 20  DILSVFE--DAFVDNFD----CKDVQDMP-------KSILSKE--EIDHI-IMSKDAVSG 63

Query: 493 ------IMLQRSLTEENLVKRIGNLQGALDDAHIEASITEGVYKCLLGEAADFIKSVSKK 546
                  +L +   +E +V++   ++  L             Y         F+ S  K 
Sbjct: 64  TLRLFWTLLSK---QEEMVQKF--VEEVLRIN----------Y--------KFLMSPIKT 100

Query: 547 SDLEYELMQEVYEIIFSDAAHNATPLAEENLVKR---IGNLQGALDDANIEASISEGVY- 602
              +  +M  +Y I   D  +N   +  +  V R      L+ AL +     ++   +  
Sbjct: 101 EQRQPSMMTRMY-IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV--LIDG 157

Query: 603 -----K-CLLREAVDSIKSVSEKSDLEYELMQEVYGIIFSDAAHNATPGSTCAFEDCDME 656
                K  +  +   S K   +          +++ +              C   +  +E
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDF-------KIFWLNLK----------NCNSPETVLE 200

Query: 657 SVIMQDLYEVIFREALKEAEVKLNELNQKYFMETELRRL--------------EVAEKEK 702
             ++Q L   I       ++   N   + + ++ ELRRL               V   + 
Sbjct: 201 --MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA 258

Query: 703 LK---------------QETRLLSSLVEEKENLVSEAVA-TLLEEKDL-SKSLSQELSHL 745
                            Q T  LS+      +L   ++  T  E K L  K L      L
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 746 RDE---TSRQQI-LISKSSKEFNDLKGNLTDALEQIEQYK-LEVHDLKQKLELAMKELRD 800
             E   T+ +++ +I++S ++               + +K +    L   +E ++  L  
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGLA----------TWDNWKHVNCDKLTTIIESSLNVLEP 368

Query: 801 TNEETRKQVQLLVIF-------IQGLSKTVADFECRAVADIERCNFRLDSLSSQSKRLIL 853
              E RK    L +F          LS    D     V  +      ++ L   S     
Sbjct: 369 --AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV------VNKLHKYS----- 415

Query: 854 KANVITRTGLSYKQKLERRCS--DLQKAEAEVDLLGDEVDTLSGLLEKIYIALDHYSSVL 911
                    L  KQ  E   S   +      ++L   +++    L   I   +DHY ++ 
Sbjct: 416 ---------LVEKQPKESTISIPSIY-----LELKV-KLENEYALHRSI---VDHY-NIP 456

Query: 912 QHYPG 916
           + +  
Sbjct: 457 KTFDS 461

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 67.6 bits (164), Expect = 1e-11
 Identities = 46/276 (16%), Positives = 100/276 (36%), Gaps = 54/276 (19%)

Query: 654 DMESVIMQ----DLYEVIFREAL-KEAEVK-LNELNQKYFMETELRRLEVAEKEKLKQET 707
           D E+   Q    D+  V F +A     + K + ++ +    + E+  + +  K+ +    
Sbjct: 8   DFETGEHQYQYKDILSV-FEDAFVDNFDCKDVQDMPKSILSKEEIDHI-IMSKDAVSGTL 65

Query: 708 RLLSSLVEEKENLVSEAVATLLEEKD---LSKSLSQELSHLRDETSRQQILISKSSKEFN 764
           RL  +L+ ++E +V + V  +L   +   L   +  E    R  +   ++ I +  + +N
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVL-RINYKFLMSPIKTE---QRQPSMMTRMYIEQRDRLYN 121

Query: 765 DLKGNLTDALEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLS---K 821
           D         +   +Y +       KL  A+ ELR              + I G+    K
Sbjct: 122 D--------NQVFAKYNVSRLQPYLKLRQALLELRPAKN----------VLIDGVLGSGK 163

Query: 822 TV-ADFECRAVADIERCNFR---LDSLSSQSKRLILK--ANVITRTGLSYKQKLERRCSD 875
           T  A   C +     + +F+   L+  +  S   +L+    ++ +   ++  + +   + 
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 876 LQKAEAEVDLLGDEVDTLSGLL-EKIY----IALDH 906
             +              L  LL  K Y    + L +
Sbjct: 224 KLRIH-------SIQAELRRLLKSKPYENCLLVLLN 252

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.9 bits (131), Expect = 1e-07
 Identities = 80/552 (14%), Positives = 171/552 (30%), Gaps = 146/552 (26%)

Query: 26  DESVMIDNNVEENENPANLVEDFDSY-------WDDINDRLTISRMVSDSVIKGMVNAIE 78
             S+M    +E+ +   N  + F  Y       +  +   L   R   + +I G++ + +
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163

Query: 79  QE-AAEKIAEKELELVRLRESLHLY--HVGAEES-----EPFQSLVMKHESGSVKHGSYS 130
              A +     +++         ++  ++    S     E  Q L+ + +       +++
Sbjct: 164 TWVALDVCLSYKVQCKM---DFKIFWLNLKNCNSPETVLEMLQKLLYQIDP------NWT 214

Query: 131 SLSDYDKIGESVGGLKNVAKEQLKNLRKE---------IDRIK----------GCSSL-- 169
           S SD+     ++    +  + +L+ L K          +  ++           C  L  
Sbjct: 215 SRSDHS---SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT 271

Query: 170 RRIGSGSEMVGLGGILQDKVSDIRW-MDVDKALDSLRTTLDTIFN------CADNTVYLS 222
            R    ++ +         +      +  D+    L   LD             N   LS
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331

Query: 223 ------KASLCQWQQEKEFQGEIEDMVIMNCFRSLKEEFEERLCDQSAQFYDNE------ 270
                 +  L  W   K    +    +I +    L+     ++ D+ + F  +       
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391

Query: 271 -SLNWLGKIK-EISSLREELNAISKSLSVSEIGHLTSHGSIEMGEEWDTNKWTDHLHRKT 328
            SL W   IK ++  +  +L     SL                  E    + T  +    
Sbjct: 392 LSLIWFDVIKSDVMVVVNKL--HKYSLV-----------------EKQPKESTISIP--- 429

Query: 329 SSNHVGVSTSPSEGNGKHDESII---VMSENLDSNLKHMSKEELVNHFKAEMTKMKRI-H 384
            S ++ +          H  SI+    + +  DS+   +    L  +F         I H
Sbjct: 430 -SIYLELKVKLENEYALHR-SIVDHYNIPKTFDSD--DLIPPYLDQYF------YSHIGH 479

Query: 385 ELKVTEMTEDLFALKREYLKERGSSLPIKKDKEFDILRKKI----------PEVLSKLDD 434
            LK  E  E +   +  +L             +F  L +KI            +L+ L  
Sbjct: 480 HLKNIEHPERMTLFRMVFL-------------DFRFLEQKIRHDSTAWNASGSILNTLQQ 526

Query: 435 I------LVENEKLPAFSENAEGLCNFKDRLESLLLENRQ---LRSLLTDKKNEVKRLSL 485
           +      + +N+  P +      + +F  ++E  L+ ++    LR  L  +         
Sbjct: 527 LKFYKPYICDND--PKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEA------ 578

Query: 486 KVSDTAEIMLQR 497
            + + A   +QR
Sbjct: 579 -IFEEAHKQVQR 589

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 66.0 bits (161), Expect = 5e-11
 Identities = 57/271 (21%), Positives = 109/271 (40%), Gaps = 29/271 (10%)

Query: 651  EDCDMESVIMQDLYEVIFREALKEA--EVKLNELNQKYFMETELRRLEVAEKEKLKQETR 708
            E    E+ +  +  E+  R A K+   E  L+E+  +   E E  +   AEK+K++Q+  
Sbjct: 899  EKLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQML 958

Query: 709  LLSSLVEEKENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKG 768
             L   +EE+E     A   L  EK    +   ++  + D+    +   +K +KE   L+ 
Sbjct: 959  DLEEQLEEEE----AARQKLQLEK---VTADGKIKKMEDDILIMEDQNNKLTKERKLLEE 1011

Query: 769  NLTDALEQIEQYKLEVHDL---KQKLELAMKELRDTNEETRKQVQ--------------L 811
             ++D    + + + +  +L   K K E  + EL    ++  K  Q               
Sbjct: 1012 RVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSD 1071

Query: 812  LVIFIQGLSKTVADFE---CRAVADIERCNFRLDSLSSQSKRLILKANVITRTGLSYKQK 868
            L   I  L   +A+ +    +   +++    RL+  +SQ    + K   +       ++ 
Sbjct: 1072 LHEQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQED 1131

Query: 869  LERRCSDLQKAEAEVDLLGDEVDTLSGLLEK 899
            LE   +   KAE +   L +E++ L   LE 
Sbjct: 1132 LESEKAARNKAEKQKRDLSEELEALKTELED 1162

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 56.0 bits (135), Expect = 6e-08
 Identities = 41/238 (17%), Positives = 86/238 (36%), Gaps = 30/238 (12%)

Query: 669  REALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATL 728
             E   EAE     L  K   + EL  +    + ++++E      L  EK+ +  +     
Sbjct: 905  TELYAEAEEMRVRLAAK---KQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQ----- 956

Query: 729  LEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLK 788
                DL + L +E +  +     +     K           + D +  +E    ++   +
Sbjct: 957  --MLDLEEQLEEEEAARQKLQLEKVTADGKIK--------KMEDDILIMEDQNNKLTKER 1006

Query: 789  QKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVADFECR------AVADIERCNFRLD 842
            + LE  + +L     E  ++ + L          +++ E R      +  ++E+      
Sbjct: 1007 KLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEK---IKR 1063

Query: 843  SLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEKI 900
             L  +S  L  +   +       K +L ++  +LQ A A ++   DE    +  L+KI
Sbjct: 1064 KLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLE---DETSQKNNALKKI 1118

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 53.3 bits (128), Expect = 3e-07
 Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 14/150 (9%)

Query: 669  REALKEAEVKLNELNQKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATL 728
             +   + E  ++EL  +   E + R+     K KL+ E+  L   + E +  ++E     
Sbjct: 1031 TKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAE----- 1085

Query: 729  LEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKL------ 782
            L+ +       +EL         +    + + K+  +L+ +++D  E +E  K       
Sbjct: 1086 LKAQ--LAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAE 1143

Query: 783  -EVHDLKQKLELAMKELRDTNEETRKQVQL 811
             +  DL ++LE    EL DT + T  Q +L
Sbjct: 1144 KQKRDLSEELEALKTELEDTLDTTATQQEL 1173

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 48.3 bits (115), Expect = 1e-05
 Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 16/243 (6%)

Query: 668  FREALKEAEVKLNELNQKYF-METELRRLEVAEKEKLKQETRLLSSLVEEKENL--VSEA 724
              E ++  + +L    ++    E EL+ LE    +  +++  L   L  E E      E 
Sbjct: 855  QEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEM 914

Query: 725  VATLLEEK-DLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLE 783
               L  +K +L + L +  + + +E  R Q L ++  K    +  +L + LE+ E  + +
Sbjct: 915  RVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQML-DLEEQLEEEEAARQK 973

Query: 784  VHDLKQKLELAMKELR-------DTNEETRKQVQLLVIFIQGLSKTVADFECRAVADIER 836
            +   K   +  +K++        D N +  K+ +LL   +  L+  +A+ E     ++ +
Sbjct: 974  LQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEE-EKAKNLTK 1032

Query: 837  CNFRLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGL 896
               + +S+ S+ +  + K     +     K+KLE   SDL +   ++  L  ++  L   
Sbjct: 1033 LKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHE---QIAELQAQIAELKAQ 1089

Query: 897  LEK 899
            L K
Sbjct: 1090 LAK 1092

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 54.3 bits (131), Expect = 2e-07
 Identities = 28/152 (18%), Positives = 62/152 (40%), Gaps = 8/152 (5%)

Query: 668  FREALKEAEVKLNELNQKYFMETELRRLEVAEKEKL----KQETRLLSSLVEEKENLVSE 723
            +++     E K+ +L +K   + +  +  + +   L      ET  L S VE       E
Sbjct: 919  YKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEE 978

Query: 724  AVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLE 783
            A         L + +++    L    + ++ +   + K  ++ +  +++  EQ    K E
Sbjct: 979  AKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTE 1038

Query: 784  VHDLKQKLELAMKELRDTN----EETRKQVQL 811
              +L +++    KE+ +T      E  KQ++L
Sbjct: 1039 KEELNRRIHDQAKEITETMEKKLVEETKQLEL 1070

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 50.9 bits (122), Expect = 2e-06
 Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 9/144 (6%)

Query: 669  REALKEAEVKLNELNQKYF--METELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVA 726
             ++L E    L          + +++ RL ++E+E      R+L SL EE   L  E   
Sbjct: 944  YKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVL-SLQEEIAKLRKELHQ 1002

Query: 727  TLLEEKDLSKSLSQELSHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHD 786
            T  E+K + +   +         S  +   +    E  +L   + D  ++I +       
Sbjct: 1003 TQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITE------T 1056

Query: 787  LKQKLELAMKELRDTNEETRKQVQ 810
            +++KL    K+L     + R + Q
Sbjct: 1057 MEKKLVEETKQLELDLNDERLRYQ 1080

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 49.3 bits (118), Expect = 5e-06
 Identities = 25/172 (14%), Positives = 64/172 (37%), Gaps = 16/172 (9%)

Query: 670  EALKEAEVKLNELNQKYFMETELRRLEVAE--KEKLKQE-----------TRLLSSLVEE 716
                +A V L    ++   + EL++L++     E+ K+             R +    +E
Sbjct: 884  HRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKE 943

Query: 717  KENLVSEAVATLLEEKDLSKSLSQELSHLRDETSRQQILISKSS---KEFNDLKGNLTDA 773
             ++L+ +     +     ++ L  ++  LR      +   ++     +E   L+  L   
Sbjct: 944  YKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQT 1003

Query: 774  LEQIEQYKLEVHDLKQKLELAMKELRDTNEETRKQVQLLVIFIQGLSKTVAD 825
              + +  +      K + E  + EL++ N   + + + L   I   +K + +
Sbjct: 1004 QTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITE 1055

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 43.8 bits (102), Expect = 4e-05
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 6/32 (18%)

Query: 87  EKELELVRLRESLHLYHVGAEESEPFQSLVMK 118
           EK+  L +L+ SL LY   A++S P  +L +K
Sbjct: 18  EKQ-ALKKLQASLKLY---ADDSAP--ALAIK 43

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245

 Score = 46.8 bits (111), Expect = 4e-05
 Identities = 33/241 (13%), Positives = 82/241 (34%), Gaps = 26/241 (10%)

Query: 684  QKYFMETELRRLEVAEKEKLKQETRLLSSLVEEKENLVSEAVATLLEE-----KDLSKSL 738
             ++    +L   +        QE  ++ + +        +AV + L        + +  L
Sbjct: 1823 SEFTRNLDLENPQYIAPPVFIQEAEIMGNNLMAIPPSHRDAVVSSLVYIHQTIGEANIRL 1882

Query: 739  SQEL--------SHLRDETSRQQILISKSSKEFNDLKGNLTDALEQIEQYKLEVHDLKQK 790
             +           H  D  ++  +LI++   +  + + +L   L+++   + +V DL+  
Sbjct: 1883 LKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVS 1942

Query: 791  LELAMKELRDTNEETRKQVQLLVIFIQGLS--KTVADFECRAVADIERC---------NF 839
            L    +EL   NE+  ++++ +V   Q     +  A      +    +            
Sbjct: 1943 LAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYAD 2002

Query: 840  RLDSLSSQSKRLILKANVITRTGLSYKQKLERRCSDLQKAEAEVDLLGDEVDTLSGLLEK 899
               +  +   R  ++   +       K K +   + +   E  +    +E  TL    E+
Sbjct: 2003 LEKAEPTGPLREEVEQ--LENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQ 2060

Query: 900  I 900
            I
Sbjct: 2061 I 2061

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00