Citrus Sinensis ID: 002392
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 928 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LK90 | 1189 | Putative phospholipid-tra | yes | no | 0.985 | 0.769 | 0.779 | 0.0 | |
| Q9SX33 | 1200 | Putative phospholipid-tra | no | no | 0.982 | 0.76 | 0.679 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.988 | 0.762 | 0.672 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.981 | 0.769 | 0.667 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.984 | 0.759 | 0.655 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.979 | 0.747 | 0.587 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.982 | 0.742 | 0.577 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.967 | 0.722 | 0.568 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.973 | 0.728 | 0.571 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.928 | 0.710 | 0.487 | 0.0 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 1518 bits (3929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/933 (77%), Positives = 834/933 (89%), Gaps = 18/933 (1%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M GER++ + FSK+YSF C+KP +DH+QIG RG++RVV+CNDPDNPE +QLNYRGNYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPY+APSVLAPL++VIGATM K
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
EGVED RRRKQD+EANNRKV+V G+ TFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS
Sbjct: 121 EGVEDLRRRKQDVEANNRKVEVLGKTGTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLKLK +LE T+ DEES + F +IKCEDPNE LYSFVGT
Sbjct: 181 SYEDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGT 237
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L +EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIE+KMD
Sbjct: 238 LYFEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMD 297
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDI-DGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
+I+Y+LFS LI+I+ TGSVFFGI T+RD+ D GK+RRWYL+PD TVFYDPRRA AAF
Sbjct: 298 QIIYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFF 357
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HFLT LMLYGYLIPISLY+SIE+VKVLQS+FIN D++MY+E+TD+PARARTSNLNEELGQ
Sbjct: 358 HFLTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQ 417
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFE-VDDSQTDAP 478
VDTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVE L K+KG T E V D+++ +
Sbjct: 418 VDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLS- 476
Query: 479 GLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGE 538
++ K+VKGFNF DERI++GQW+N+P++++IQKFFRVLAICHTAIPDVN +TGE
Sbjct: 477 ------IKEQKAVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGE 530
Query: 539 ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSS 598
I+YEAESPDEAAFVIA+RE+GF+FF SQTSISLHE+D ++G+KV+RVYELLHVLEF+SS
Sbjct: 531 ITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSS 590
Query: 599 RKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAY 658
RKRMSV+VRNPEN+LLLL KGADSVMF+RL+KHG+Q E ET+ HI +YAEAGLRTLVI Y
Sbjct: 591 RKRMSVIVRNPENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITY 650
Query: 659 RELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPEC 718
RE+ EDEY +WE+EFL AKT VT DR+AL+ +AA+KIE+DLILLG+TAVEDKLQKGVP+C
Sbjct: 651 REIDEDEYIVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDC 710
Query: 719 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENI 778
I+KL+QAG+K+WVLTGDK ETAINIGYACSLLR+ MKQI++TLDS D+EALEKQGDKE +
Sbjct: 711 IEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAV 770
Query: 779 TKVSLESVTKQIREGISQV-----NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833
K S +S+ KQ+REG+SQ NSAKE+ FGLVIDGKSL +ALD KLEK FL+LAI
Sbjct: 771 AKASFQSIKKQLREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAI 830
Query: 834 DCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892
C SVICCRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISG EGMQA
Sbjct: 831 RCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQA 890
Query: 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
VM+SD+AIAQFRFLERLLLVHGHWCYRRI++M+
Sbjct: 891 VMASDFAIAQFRFLERLLLVHGHWCYRRITLMI 923
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1324 bits (3426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/917 (67%), Positives = 763/917 (83%), Gaps = 5/917 (0%)
Query: 11 FSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANF 70
SK+Y+ C + F DH+QIG GF+RVVYCN+PD+PE NY NYV TTKYT A F
Sbjct: 15 LSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTKYTLATF 74
Query: 71 IPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRK 130
+PKSLFEQFRRVAN YFLV ++F+PLAPY+A S + PL+ VIGATM KEGVEDWRR+K
Sbjct: 75 LPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRRQK 134
Query: 131 QDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190
QD E NNRKVKV+ D +F +WK L +GD+VKV K+E+FPADL+LLSS YED ICYVE
Sbjct: 135 QDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICYVE 194
Query: 191 TMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 250
TMNLDGETNLK+K+ LE T+ LRDE +F+ F A +KCEDPN LYSFVGT++ +G +YPL
Sbjct: 195 TMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPL 254
Query: 251 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTL 310
SPQQ+LLRDSKL+NTD+++G V+FTGHDTKV+QN+TDPPSKRS IE+KMDKI+YL+F +
Sbjct: 255 SPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMV 314
Query: 311 ILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGY 370
I ++ GSV FG+ T+ D+ G ++RWYL+PD +++F+DP+RAP+AA HFLT +MLY Y
Sbjct: 315 ITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSY 374
Query: 371 LIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 430
IPISLY+SIEIVKVLQS+FIN D MYYE+ DKPARARTSNLNEELGQVDTILSDKTGT
Sbjct: 375 FIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGT 434
Query: 431 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRK-GERTFEVDDSQTDAPGLNGNIVESGK 489
LTCNSMEF+KCSVAG AYGR +TEVE + +RK G F+ D++ D I E
Sbjct: 435 LTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEES- 493
Query: 490 SVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEA 549
+VKGFNFRDERIMNG WV E H+DVIQKFFR+LA+CHT IP+V+E+T +ISYEAESPDEA
Sbjct: 494 TVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEA 553
Query: 550 AFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP 609
AFVIAARE+GF+FF +QT+IS+ ELD VSG++V R+Y++L+VLEF S+RKRMSV+V+
Sbjct: 554 AFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEE 613
Query: 610 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669
+ +LLLLCKGAD+VMFERLSK+G++FE ETR H+N YA+AGLRTL++AYREL E EY+++
Sbjct: 614 DGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVF 673
Query: 670 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 729
+ +AK+SV++DRE+L+ EKIE+DLILLGATAVEDKLQ GVP+CIDKLAQAGIK+
Sbjct: 674 NERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKI 733
Query: 730 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789
WVLTGDKMETAINIG+ACSLLRQ+MKQI+I L++P++++LEK G+K+ I K S E+V Q
Sbjct: 734 WVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQ 793
Query: 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 849
I G +Q+ + + F L+IDGKSL +ALD ++ +FL+LA+ CASVICCRSSPKQKA
Sbjct: 794 IINGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKA 851
Query: 850 LVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 908
LVTRLVK G GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQFR+LER
Sbjct: 852 LVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLER 911
Query: 909 LLLVHGHWCYRRISMMV 925
LLLVHGHWCYRRIS M+
Sbjct: 912 LLLVHGHWCYRRISTMI 928
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1299 bits (3361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/927 (67%), Positives = 755/927 (81%), Gaps = 10/927 (1%)
Query: 2 PGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVS 61
P R+R++ SKIYS+ C K F +DH+ IG GF+RVVYCN+P +P + NY GNYV
Sbjct: 4 PSRRRRRLHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVR 63
Query: 62 TTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKE 121
+TKYT A+F PKSLFEQFRRVAN YFLV +S + L+PY A S L PL +VI ATM KE
Sbjct: 64 STKYTVASFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKE 123
Query: 122 GVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSI 181
G+EDWRR++QDIE NNRKVKV+ + F + +W+NLRVGD+V+V KDE+FPADLLLLSS
Sbjct: 124 GIEDWRRKQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSS 183
Query: 182 YEDGICYVETMNLDGETNLKLKRSLEATNHLRDEES-FQKFTAVIKCEDPNERLYSFVGT 240
YED +CYVETMNLDGETNLK+K+ LEAT+ L +++S F+ F V++CEDPN LY FVGT
Sbjct: 184 YEDSVCYVETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGT 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L E +++PLS QQILLRDSKL+NT+YVYG VVFTGHDTKV+QN+TDPPSKRS+IER MD
Sbjct: 244 LALEEERFPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMD 303
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRD-IDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
KI+YL+F + L+S GS+ FG+ET+ D + G+ RWYL+PDDA +F+DP RAP+AA
Sbjct: 304 KIIYLMFGLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIY 363
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HF T MLY Y IPISLY+SIEIVKVLQS+FIN D MYYE+TDKPA+ARTSNLNEELG
Sbjct: 364 HFFTATMLYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGM 423
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPG 479
VDTILSDKTGTLTCNSMEF+KCS+AG AYGR +TEVER +A R G +D
Sbjct: 424 VDTILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNED------- 476
Query: 480 LNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEI 539
L+ + +SG VKGFNF DER+MNG WV +P + V+QKFFR+LA+CHTAIP+ +EE+G +
Sbjct: 477 LDVVVDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNV 536
Query: 540 SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599
SYEAESPDEAAFV+AARE GF+FF +Q IS ELD VSG+KV RVY LL+VLEF S+R
Sbjct: 537 SYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTR 596
Query: 600 KRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYR 659
KRMSV+VR+ + +LLLL KGAD+VMFERL+K+G+QFEA+T+ H+N+YA+AGLRTLV+AYR
Sbjct: 597 KRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYR 656
Query: 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECI 719
E+ E+EY + K F +AK SV+ DREAL+ +K+ERDLILLGATAVEDKLQ GVPECI
Sbjct: 657 EVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECI 716
Query: 720 DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 779
DKLAQAGIK+WVLTGDKMETAINIG+A SLLRQEMKQI+I L++P +++LEK G K+ I
Sbjct: 717 DKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIE 776
Query: 780 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839
S ESV Q++EG + + ++ S F L+IDGKSL +AL+ +++KMFLDLA CASVI
Sbjct: 777 LASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVI 836
Query: 840 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898
CCRSSPKQKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD
Sbjct: 837 CCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 896
Query: 899 AIAQFRFLERLLLVHGHWCYRRISMMV 925
AIAQFR+LERLLLVHGHWCY RI+ M+
Sbjct: 897 AIAQFRYLERLLLVHGHWCYSRIASMI 923
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1294 bits (3348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/926 (66%), Positives = 760/926 (82%), Gaps = 15/926 (1%)
Query: 5 RKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTK 64
RKRKI SK+++ K F DH++IG+ GF+RVV+CN PD+PE NY NYV TTK
Sbjct: 9 RKRKIQLSKLFTLTGAKACFKPDHSKIGRSGFSRVVFCNQPDSPEAESRNYCDNYVRTTK 68
Query: 65 YTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVE 124
YT A F+PKSLFEQFRRVAN YFLVV +SF+PLAPY+A S + PL VI ATM KEGVE
Sbjct: 69 YTLATFLPKSLFEQFRRVANFYFLVVGILSFTPLAPYTAVSAIVPLTFVILATMFKEGVE 128
Query: 125 DWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184
DWRR++QDIE NNRKV+V+ + F +WK LRVGD++KV K+E+FPADL+LLSS YED
Sbjct: 129 DWRRKQQDIEVNNRKVRVHRGNGNFDLREWKTLRVGDILKVEKNEFFPADLVLLSSSYED 188
Query: 185 GICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYE 244
+CYVETMNLDGETNLKLK+ LE T LR+E +F+ F A IKCEDPN LYSFVGT+ +
Sbjct: 189 AVCYVETMNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVGTMDLK 248
Query: 245 GKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVY 304
G++YPLSPQQ+LLR SKL+NTDY+YGVV+FTG DTKV+QN+TDPPSKRS IERKMDKI+Y
Sbjct: 249 GEKYPLSPQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKMDKIIY 308
Query: 305 LLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTG 364
L+F + ++ GSV FGI T+ D G + RWYL+PDD+++F+DP+RAP+AA HFLT
Sbjct: 309 LMFLMVFSLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIYHFLTA 368
Query: 365 LMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTIL 424
LML Y IPISLY+SIEIVKVLQS+FIN D MYYE+ DKPA ARTSNLNEELGQV TIL
Sbjct: 369 LMLNSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVGTIL 428
Query: 425 SDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNI 484
SDKTGTLTCNSMEF+KCS+AG AYGR +TEVE + KRKG V+ S NGN
Sbjct: 429 SDKTGTLTCNSMEFIKCSIAGTAYGRGVTEVEMAMDKRKGSAL--VNQS-------NGNS 479
Query: 485 VESG----KSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
E +VKGFNFRDERIM+G WV E H+DVIQKFF++LA+CHT IP+V+E+TG+IS
Sbjct: 480 TEDAVAAEPAVKGFNFRDERIMDGNWVTETHADVIQKFFQLLAVCHTVIPEVDEDTGKIS 539
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF +QT+IS+ ELD V+G++V R+Y +L+VLEF+SS+K
Sbjct: 540 YEAESPDEAAFVIAARELGFEFFTRTQTTISVRELDLVTGERVERLYSVLNVLEFSSSKK 599
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+V++ + +LLLLCKGADSVMFERLS+ G+++E ETR H+N YA+AGLRTL++AYRE
Sbjct: 600 RMSVIVQDQDGKLLLLCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRE 659
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY ++ + +AK SV++DREAL+ EKIE++L+LLGATAVEDKLQ GVP+CI+
Sbjct: 660 LDENEYEVFTERISEAKNSVSADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCIN 719
Query: 721 KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780
KLAQAGIK+WVLTGDKMETAINIG+ACSLLR++MKQI+I L++P+++ LEK G+K+ I
Sbjct: 720 KLAQAGIKIWVLTGDKMETAINIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKDAIAA 779
Query: 781 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVIC 840
+ E+V QI G +Q+ ++ + F L+IDGKSL +AL++ ++ +FL+LAI CASVIC
Sbjct: 780 LK-ENVLHQITSGKAQLKASGGNAKAFALIIDGKSLAYALEEDMKGIFLELAIGCASVIC 838
Query: 841 CRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899
CRSSPKQKALVTRLVK G+G+TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD A
Sbjct: 839 CRSSPKQKALVTRLVKTGSGQTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIA 898
Query: 900 IAQFRFLERLLLVHGHWCYRRISMMV 925
IAQFR+LERLLLVHGHWCYRRIS M+
Sbjct: 899 IAQFRYLERLLLVHGHWCYRRISKMI 924
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1259 bits (3257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/927 (65%), Positives = 743/927 (80%), Gaps = 13/927 (1%)
Query: 5 RKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTK 64
R+R++ S IY+F K F +DH+ IG GF+RVVYCN+P++P + NY GNYV +TK
Sbjct: 5 RRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYVRSTK 64
Query: 65 YTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVE 124
YT A+FIPKSLFEQFRRVAN YFLV +S + L+PYS S L PL VI A+M KE +E
Sbjct: 65 YTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVKEAIE 124
Query: 125 DWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184
DW R+KQDIE NNRKVKV+ + F W++L+VG++V+V KDE+FPADLLLLSS YED
Sbjct: 125 DWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSSSYED 184
Query: 185 GICYVETMNLDGETNLKLKRSLEATNH-LRDEESFQKFTAVIKCEDPNERLYSFVGTLQY 243
ICYVETMNLDGETNLK+K+ LEAT+ L ++ F++ AV+KCEDPN LY+FVGTL +
Sbjct: 185 SICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHF 244
Query: 244 EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIV 303
E ++ PLS Q+LLRDSKL+NT+Y+YGVVVFTGHDTKV+QN+TDPPSKRS+IERKMDKI+
Sbjct: 245 EEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKII 304
Query: 304 YLLFSTLILISSTGSVFFGIETKRDI--DGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361
YL+F + L+S GS+ FGIET+ D +GG+ RWYL+PD+A +F+DP RAP+AA HF
Sbjct: 305 YLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHF 364
Query: 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVD 421
T +MLY Y IPISLY+SIEIVKVLQS+FIN+D MYYE+ DKPA ARTSNLNEELG VD
Sbjct: 365 FTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVD 424
Query: 422 TILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLN 481
TILSDKTGTLTCNSMEF+KCS+AG AYGR +TEVER++A R + S L+
Sbjct: 425 TILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRS-------NGSSLVGDDLD 477
Query: 482 GNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISY 541
+ +SG +KGFNF DER+M G WV + + V+QKFFR+LA+CHTAIP+ +E TG +SY
Sbjct: 478 VVVDQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSY 537
Query: 542 EAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKR 601
EAESPDEAAFV+AARE GF+FF +Q IS ELD SG+ V RVY LL+VLEF S+RKR
Sbjct: 538 EAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKR 597
Query: 602 MSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYREL 661
MSV+VR+ + +LLLL KGAD+VMFERL+K+G++FE +TR H+N YA+AGLRTL++AYRE+
Sbjct: 598 MSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREV 657
Query: 662 GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDK 721
E+EY + K F +AK SVT+DRE+L+ E++ERDLILLGATAVEDKLQ GVP+CIDK
Sbjct: 658 DENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDK 717
Query: 722 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKV 781
LAQAGIK+WVLTGDKMETAINIG+ACSLLRQEMKQI+I L++P ++ALEK G+K+ I
Sbjct: 718 LAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHA 777
Query: 782 SLESVTKQIREGISQVNSAKESKV--TFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839
S ESV Q+ EG + + ++ + F L+IDGKSL +AL+ +K FLDLA CASVI
Sbjct: 778 SRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVI 837
Query: 840 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898
CCRSSPKQKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD
Sbjct: 838 CCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 897
Query: 899 AIAQFRFLERLLLVHGHWCYRRISMMV 925
AIAQFR+LERLLLVHGHWCY RIS M+
Sbjct: 898 AIAQFRYLERLLLVHGHWCYSRISSMI 924
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/936 (58%), Positives = 686/936 (73%), Gaps = 27/936 (2%)
Query: 3 GERKRKILFSKIYSFACWKPPFSDDHAQ----IGQRGFARVVYCNDPDNPEVVQLNYRGN 58
G + K+ S IY+F C +P S D Q I GF+R VYCN P + L YR N
Sbjct: 4 GRIRSKLRLSHIYTFGCLRP--SADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRSN 61
Query: 59 YVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATM 118
YVSTT+Y F PK L+EQF R AN YFLV A +S PL+P++ S++APL+ V+G +M
Sbjct: 62 YVSTTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSM 121
Query: 119 AKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLL 178
KE +EDW R QD++ N KV V+ D F KWK + VGD+VKV KD +FPADLLLL
Sbjct: 122 LKEALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLL 181
Query: 179 SSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFV 238
SS YEDGICYVETMNLDGETNLK+KRSLE T L D +SF+ FT +I+CEDPN LY+FV
Sbjct: 182 SSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFV 241
Query: 239 GTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERK 298
G L+YE + +PL P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE+
Sbjct: 242 GNLEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKT 301
Query: 299 MDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAF 358
MD I+Y L LILIS S F ETK + + WYL+P++ +P A F
Sbjct: 302 MDYIIYTLLVLLILISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGF 357
Query: 359 LHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELG 418
+H +T L+LYGYLIPISLY+SIE+VKVLQ+ FIN D MY ++ PA ARTSNLNEELG
Sbjct: 358 VHLITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELG 417
Query: 419 QVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDD--SQTD 476
QVDTILSDKTGTLTCN M+F+KCS+AG +YG +EVE A++ E + S+T
Sbjct: 418 QVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTS 477
Query: 477 APGLNGNIVESGKSV------KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIP 530
P +E S+ KGF F D R+M+G W+ EPH+D I FFR+LAICHTAIP
Sbjct: 478 TPRAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIP 537
Query: 531 DVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELL 590
++NEETG+ +YEAESPDEA+F+ AA E GF FF +Q+S+ +HE SGQ + R Y++L
Sbjct: 538 ELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVL 597
Query: 591 HVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAG 650
++L+FTS RKRMSV+VR+ E Q+LLLCKGADS++FERL+K+G+ + T +H+N Y EAG
Sbjct: 598 NLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAG 657
Query: 651 LRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDK 710
LRTL ++YR+L E+EY W EF KAKTS+ SDR+ L+ ++ IE+DLIL+GATAVEDK
Sbjct: 658 LRTLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDK 717
Query: 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALE 770
LQKGVP+CIDKLAQAG+K+WVLTGDKMETAINIGY+CSLLRQ MKQI IT+ + + + +
Sbjct: 718 LQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGASQD 777
Query: 771 KQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLD 830
+ K+NI QI + + V K+ F L+IDGK+L +AL+ +++ FL
Sbjct: 778 AKAVKDNI--------LNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLA 829
Query: 831 LAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEG 889
LA+DCASVICCR SPKQKALVTRLVK GTGK TLAIGDGANDVGM+QEADIGVGISGVEG
Sbjct: 830 LAVDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEG 889
Query: 890 MQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
MQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ M+
Sbjct: 890 MQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 925
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/945 (57%), Positives = 686/945 (72%), Gaps = 33/945 (3%)
Query: 3 GERKRKILFSKIYSFACWKPPF--SDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
G + K+ S +Y+F C +P D I GF+R V+CN P + L YR NYV
Sbjct: 4 GRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRSNYV 63
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STT+Y F PKSL+EQF R AN+YFLV A +S PL+P++ S++APL+ V+G +M K
Sbjct: 64 STTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E +EDWRR QD++ N RK V+ D F + KWK + VGD+VKV KDE+FPADLLLLSS
Sbjct: 124 EALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLLLSS 183
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLK+KRSLE + L D+ESF+ F A I+CEDPN LY+FVG
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGN 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L++E + +PL P QILLRDSKL+NT YVYGVVVFTG DTKVMQN+T PSKRS+IER MD
Sbjct: 244 LEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMD 303
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
I+Y L LILIS S F ET+ + + WYL+P + F +P A +H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETEFHMP----KMWYLRPGEPIDFTNPINPIYAGVVH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
+T L+LYGYLIPISLY+SIE+VKV Q+ FIN D MY +++ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG---ERTFEVDD---SQ 474
TILSDKTGTLTCN M+F+KCS+AG +YG +EVE AK+ E E+ SQ
Sbjct: 420 HTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQ 479
Query: 475 TDAPGL-------------NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521
T G + N +KGF F D R+MNG W+ E + I +FFR+
Sbjct: 480 TKVYGTWDSSRTQEIEVEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRI 539
Query: 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQ 581
LAICHTAIP++NEETG+ +YEAESPDEA+F+ AARE GF+FF +Q+S+ + E SGQ
Sbjct: 540 LAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQ 599
Query: 582 KVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 641
+ R Y++L++LEFTS RKRM+V+VR+ E Q+LLLCKGADS++FERL+K+G+ + T R
Sbjct: 600 IIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR 659
Query: 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
H+ Y EAGLRTL +AYR+L EDEY W EFLKAKTS+ SDR+ L+ + A+ IE++LIL
Sbjct: 660 HLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELIL 719
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITL 761
+GATAVEDKLQKGVP+CIDKLAQAG+K+WVLTGDKMETAINIG+ACSLLRQ M+QI IT
Sbjct: 720 IGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICIT- 778
Query: 762 DSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821
++ +G ++ +V E++ Q+ + + V K+ F L+IDGK+L +AL+
Sbjct: 779 ------SMNSEGGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALE 832
Query: 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADI 880
++ FL LA+DCASVICCR SPKQKALV RLVK GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 833 DDMKYQFLALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADI 892
Query: 881 GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
GVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ M+
Sbjct: 893 GVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 937
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/948 (56%), Positives = 684/948 (72%), Gaps = 50/948 (5%)
Query: 12 SKIYSFACWKPPFSDDHAQ--IGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAAN 69
S Y+F C +P +D I G+ R+V+CN P L Y NYVSTT+Y
Sbjct: 13 SHFYTFKCLRPKTLEDQGPHIINGPGYTRIVHCNQPHLHLAKVLRYTSNYVSTTRYNLIT 72
Query: 70 FIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRR 129
F+PK L+EQF RVAN YFLV A +S PL+P++ S++APLI V+G +M KE +EDWRR
Sbjct: 73 FLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLIFVVGLSMGKEALEDWRRF 132
Query: 130 KQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYV 189
QD++ N+RK V+ D F KWK LRVGD+VKV KD++FPADLLLLSS YEDGICYV
Sbjct: 133 MQDVKVNSRKATVHRGDGDFGRRKWKKLRVGDVVKVEKDQFFPADLLLLSSSYEDGICYV 192
Query: 190 ETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYP 249
ETMNLDGETNLK+KR L+ T L +++FQ F+ IKCEDPN LY+FVG L+Y+G+ YP
Sbjct: 193 ETMNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQVYP 252
Query: 250 LSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFST 309
L P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE++MD I+Y LF+
Sbjct: 253 LDPSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFAL 312
Query: 310 LILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYG 369
L+L+S S+ F + TK + WYL+PD +PR A +H +T ++LYG
Sbjct: 313 LVLVSFISSLGFAVMTKMHMGDW----WYLRPDKPERLTNPRNPFHAWVVHLITAVLLYG 368
Query: 370 YLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 429
YLIPISLY+SIE+VKVLQ+ FIN D MY ++ PA+ARTSNLNEELGQVDTILSDKTG
Sbjct: 369 YLIPISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTG 428
Query: 430 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ----TDAPGLNGNIV 485
TLTCN M+F+KCS+AG +YG +EVE AK + ++D+ Q T P G +
Sbjct: 429 TLTCNQMDFLKCSIAGTSYGVRASEVELAAAK---QMAIDLDEEQGEEVTHLPRTRGRMH 485
Query: 486 ESGK---------------------------SVKGFNFRDERIMNGQWVNEPHSDVIQKF 518
K +KGF+F D+R+M G W+NEP+SD I F
Sbjct: 486 GYAKMPSKTSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMF 545
Query: 519 FRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPV 578
R+LA+CHTAIP+V+E+TG+ +YEAESPDE AF++AA E GF+F +Q+S+ + E
Sbjct: 546 LRILAVCHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH-- 603
Query: 579 SGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAE 638
SGQ V R Y++L+VL+FTS RKRMSV+VR+ + Q+LLLCKGADS++FERLSK+G+ +
Sbjct: 604 SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEA 663
Query: 639 TRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERD 698
T +H+N Y EAGLRTL ++YR+L E EY IW EF KAKTSV +DR+ ++ ++ +E++
Sbjct: 664 TSKHLNGYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKE 723
Query: 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIV 758
LIL+GATAVEDKLQKGVP+CIDKLAQAG+K+WVLTGDKMETAINIGYACSLLRQ MKQI
Sbjct: 724 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIY 783
Query: 759 ITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDF 818
I L + ++G ++ + E++ QI + K+ F L+IDGK+L +
Sbjct: 784 IALRN-------EEGSSQDPEAAARENILMQIINASQMIKLEKDPHAAFALIIDGKTLTY 836
Query: 819 ALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQE 877
AL+ ++ FL LA+DCASVICCR SPKQKALVTRL K GTGKTTLAIGDGANDVGM+QE
Sbjct: 837 ALEDDIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQE 896
Query: 878 ADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
ADIGVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ M+
Sbjct: 897 ADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 944
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/945 (57%), Positives = 679/945 (71%), Gaps = 42/945 (4%)
Query: 12 SKIYSFACWKPPFSDDHAQ--IGQRGFARVVYCNDPDNPEVVQL-NYRGNYVSTTKYTAA 68
S Y+F C +P DD I G+ R+V+CN P +L YR NYVSTT+Y
Sbjct: 13 SHFYTFRCLRPKTLDDQGPHVINGPGYTRIVHCNQPHLHLATKLIRYRSNYVSTTRYNLL 72
Query: 69 NFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128
F+PK L+EQF RVAN YFLV A +S PL+P++ S++APL+ V+G +M KE +EDWRR
Sbjct: 73 TFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMGKEALEDWRR 132
Query: 129 RKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICY 188
QD+E N+RK V+ F WK +RVGD+V+V KDE+FPADLLLLSS YEDGICY
Sbjct: 133 FMQDVEVNSRKASVHKGSGDFGRRTWKRIRVGDIVRVEKDEFFPADLLLLSSSYEDGICY 192
Query: 189 VETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQY 248
VETMNLDGETNLK+KR L+AT L +ESFQ F+ IKCEDPN LY+FVG L+ +G+ Y
Sbjct: 193 VETMNLDGETNLKVKRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQVY 252
Query: 249 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFS 308
PL P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE++MD I+Y LF+
Sbjct: 253 PLDPNQILLRDSKLRNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFA 312
Query: 309 TLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLY 368
L+ +S S+ F + TK + WYL+PD +P A +H +T L+LY
Sbjct: 313 LLLTVSFISSLGFAVMTKLLM----AEWWYLRPDKPESLTNPTNPLYAWVVHLITALLLY 368
Query: 369 GYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 428
GYLIPISLY+SIE+VKVLQ+ FIN D +Y ++ PA+ARTSNLNEELGQVDTILSDKT
Sbjct: 369 GYLIPISLYVSIEVVKVLQAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKT 428
Query: 429 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKR-------KGERTFEVD---------- 471
GTLTCN M+F+KCS+AG +YG +EVE AK+ KGE +
Sbjct: 429 GTLTCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYA 488
Query: 472 --DSQTDAPGLNGNIVES--------GKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521
S+T + +V + VKGF+F D R+MN W+NEP+SD I FFR+
Sbjct: 489 KLASKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRI 548
Query: 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQ 581
LA+CHTAIP+V+E+TG +YEAESPDE AF++A+RE GF+F +Q+S+ + E SGQ
Sbjct: 549 LAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSSGQ 608
Query: 582 KVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 641
V+R Y++L++L+FTS RKRMS +VR+ E Q+LLLCKGADS++FERLSK G+++ T +
Sbjct: 609 PVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSK 668
Query: 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
H+N Y EAGLRTL + YR+L E EY W EF KAKTSV +DR+ ++ ++ +E++LIL
Sbjct: 669 HLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELIL 728
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITL 761
+GATAVEDKLQKGVP+CID LAQAG+K+WVLTGDKMETAINIGYACSLLRQ MKQI I+L
Sbjct: 729 VGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISISL 788
Query: 762 DSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821
+ + E + E K ES+ QI + K+ F L+IDGK+L +AL
Sbjct: 789 TNVE----ESSQNSEAAAK---ESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYALK 841
Query: 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADI 880
++ FL LA+DCASVICCR SPKQKALVTRL K GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 842 DDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADI 901
Query: 881 GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
GVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ M+
Sbjct: 902 GVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 946
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/894 (48%), Positives = 608/894 (68%), Gaps = 32/894 (3%)
Query: 38 RVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP 97
R VYCND ++ + V+ ++GN +STTKY F+PK LFEQFRR+ANIYFL ++ +S +P
Sbjct: 36 RTVYCNDRESNQPVR--FKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP 93
Query: 98 LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNL 157
++P S + +APL +V+ ++ KE EDW+R + D+ NN V++ QD +V W+ L
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEIL-QDQQWVSIPWRKL 152
Query: 158 RVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEAT-NHLRDEE 216
+VGD+VK+ KD +FPAD+L +SS DGICYVET NLDGETNLK++++LE T ++L E+
Sbjct: 153 QVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEK 212
Query: 217 SFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276
+++ F I+CE PN LY+F G L + + PLSP Q+LLR L+NT+Y+ G VVFTG
Sbjct: 213 AYE-FKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTG 271
Query: 277 HDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRR 336
H+TKVM NA + PSKRS +E+K+DK++ +F L+ + G++ I T R+
Sbjct: 272 HETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDK------ 325
Query: 337 WYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSV-FINHDR 395
YL ++ ++ R + F F T + L+ +IPISLY+SIE++K +QS FIN D
Sbjct: 326 -YLGLHNSD--WEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDL 382
Query: 396 DMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEV 455
+MY+ +T+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCS+ GV+YG +TE+
Sbjct: 383 NMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEI 442
Query: 456 ERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVI 515
E+ +A+R G + E S G I E KGFNF D R+M G W NEP+ D+
Sbjct: 443 EKGIAQRHGLKVQEEQRS-------TGAIRE-----KGFNFDDPRLMRGAWRNEPNPDLC 490
Query: 516 QKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHEL 575
++ FR LAICHT +P+ +E +I Y+A SPDEAA V AA+ GF F+ + T + + E
Sbjct: 491 KELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRES 550
Query: 576 DPVSGQKVNRV-YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQ 634
K+ V YE+L+VLEF S+RKR SV+ R P+ +L+L CKGAD+V+FERL+
Sbjct: 551 HVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDD 610
Query: 635 FEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEK 694
TR H+ + +GLRTL +AY++L + Y W ++F++AK+++ DRE + AE
Sbjct: 611 VRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSAL-RDREKKLDEVAEL 669
Query: 695 IERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754
IE+DLIL+G+TA+EDKLQ+GVP CI+ L++AGIK+WVLTGDKMETAINI YAC+L+ EM
Sbjct: 670 IEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEM 729
Query: 755 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKV--TFGLVID 812
KQ VI+ ++ + E++GD+ I +V E V +++++ + + + + LVID
Sbjct: 730 KQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKLSLVID 789
Query: 813 GKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGAND 871
GK L +ALD L M L L+++C SV+CCR SP QKA VT LV KG K TL+IGDGAND
Sbjct: 790 GKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGAND 849
Query: 872 VGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
V M+Q A +G+GISG+EGMQAVM+SD+AIAQFRFL LLLVHG W Y RI +V
Sbjct: 850 VSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVV 903
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 928 | ||||||
| 356571326 | 1189 | PREDICTED: putative phospholipid-transpo | 0.996 | 0.777 | 0.790 | 0.0 | |
| 356513941 | 1194 | PREDICTED: putative phospholipid-transpo | 0.996 | 0.774 | 0.779 | 0.0 | |
| 255567333 | 1181 | Phospholipid-transporting ATPase, putati | 0.989 | 0.777 | 0.791 | 0.0 | |
| 334185669 | 1189 | phospholipid-translocating ATPase [Arabi | 0.985 | 0.769 | 0.779 | 0.0 | |
| 225452444 | 1180 | PREDICTED: putative phospholipid-transpo | 0.991 | 0.779 | 0.795 | 0.0 | |
| 297815050 | 1173 | hypothetical protein ARALYDRAFT_484577 [ | 0.967 | 0.765 | 0.769 | 0.0 | |
| 147821807 | 1182 | hypothetical protein VITISV_037830 [Viti | 0.985 | 0.774 | 0.779 | 0.0 | |
| 357495971 | 1193 | ATPase [Medicago truncatula] gi|35549328 | 0.996 | 0.775 | 0.743 | 0.0 | |
| 224055525 | 1144 | aminophospholipid ATPase [Populus tricho | 0.971 | 0.788 | 0.740 | 0.0 | |
| 225423806 | 1186 | PREDICTED: putative phospholipid-transpo | 0.991 | 0.775 | 0.690 | 0.0 |
| >gi|356571326|ref|XP_003553829.1| PREDICTED: putative phospholipid-transporting ATPase 8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1557 bits (4032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 734/928 (79%), Positives = 843/928 (90%), Gaps = 3/928 (0%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
MP KR+I FSK+YSF+C K PF D H+QIGQ+G++RVV+CNDPDNPE VQLNY GNYV
Sbjct: 1 MPEGSKRRIRFSKLYSFSCLKYPFRDGHSQIGQKGYSRVVHCNDPDNPEAVQLNYGGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NFIPKSLFEQFRRVANIYFLVVA VSFSPLAP++A S++APL+VVIGATMAK
Sbjct: 61 STTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPFTALSIVAPLLVVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRRKQDIEANNRKV+VYG+++TFVET+WK LRVGD++KV+KDEYFPADLLLLSS
Sbjct: 121 EAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVYKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
Y+DG+CYVETMNLDGETNLKLK +LE + HL+DE+S QKF AV+KCEDPNE LYSF+GT
Sbjct: 181 SYDDGVCYVETMNLDGETNLKLKHALEVSIHLQDEKSLQKFKAVVKCEDPNENLYSFIGT 240
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
LQY+GK+YPLS QQILLRDSKLKNTDY+YGVV+FTGHDTKVMQN+TDPPSKRSKIERKMD
Sbjct: 241 LQYDGKEYPLSLQQILLRDSKLKNTDYIYGVVIFTGHDTKVMQNSTDPPSKRSKIERKMD 300
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
KI+Y+LFSTL+LIS GSVFFG+ETKRDI G+ RRWYL+PD+ TVFYDPRRA LAA LH
Sbjct: 301 KIIYILFSTLVLISFIGSVFFGVETKRDISSGRYRRWYLRPDNTTVFYDPRRATLAAVLH 360
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
FLT LMLYGYLIPISLY+SIE+VKVLQS+FINHD++MYYE+TD+PARARTSNLNEELGQV
Sbjct: 361 FLTALMLYGYLIPISLYVSIELVKVLQSIFINHDQEMYYEETDRPARARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480
DTILSDKTGTLTCNSMEFVKCS+ G+ YGR MTEVE+ LA+R + EVD +D G
Sbjct: 421 DTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKDVESEVDGGSSDLLGQ 480
Query: 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
+ + V+S +KGFNFRDERIMNGQWVNEP++D IQ+FFRVLAICHTAIPDV++E+ EIS
Sbjct: 481 SNDFVDSRHPIKGFNFRDERIMNGQWVNEPYTDFIQRFFRVLAICHTAIPDVDKESREIS 540
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF +QTSISLHEL+ SG+KV+RVY+LLHVLEF+SSRK
Sbjct: 541 YEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSSRK 600
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+VRN ENQLLLLCKGADSVMFERLS+HG+QFEAETR HI RY+EAGLRTLVI YRE
Sbjct: 601 RMSVIVRNEENQLLLLCKGADSVMFERLSQHGRQFEAETRDHIKRYSEAGLRTLVITYRE 660
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY++W+ EF K KT+VT DR+ALV +AA+K+ERDLILLGATAVED+LQKGVPECI+
Sbjct: 661 LDEEEYKLWDNEFSKIKTTVTEDRDALVDAAADKMERDLILLGATAVEDRLQKGVPECIE 720
Query: 721 KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780
KLAQA IK+WVLTGDKMETA+NIGYACSLLRQ+MKQIVITLDSPD+ +LEKQGDKE ++K
Sbjct: 721 KLAQAKIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALSK 780
Query: 781 VSLESVTKQIREGISQVNSAKESKVT--FGLVIDGKSLDFALDKKLEKMFLDLAIDCASV 838
S+ES+ KQIREGISQ+ SAKES T FGL+IDGKSLD++L+K LE+ F +LAI+CASV
Sbjct: 781 ASIESIKKQIREGISQIKSAKESSNTTGFGLIIDGKSLDYSLNKNLERAFFELAINCASV 840
Query: 839 ICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 897
ICCRSSPKQKA VT+LVK GTGKT L+IGDGANDVGMLQEADIGVGISG EGMQAVM+SD
Sbjct: 841 ICCRSSPKQKARVTKLVKLGTGKTILSIGDGANDVGMLQEADIGVGISGAEGMQAVMASD 900
Query: 898 YAIAQFRFLERLLLVHGHWCYRRISMMV 925
+AIAQFRFLERLLLVHGHWCYRRISMM+
Sbjct: 901 FAIAQFRFLERLLLVHGHWCYRRISMMI 928
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513941|ref|XP_003525666.1| PREDICTED: putative phospholipid-transporting ATPase 8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1542 bits (3992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/933 (77%), Positives = 838/933 (89%), Gaps = 8/933 (0%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
MP K +I FSK+YSF+C K PF D H+QIG++G++RVVYCNDPDNPE VQLNY GNYV
Sbjct: 1 MPEGSKSRIRFSKLYSFSCLKSPFRDGHSQIGRKGYSRVVYCNDPDNPEAVQLNYGGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NFIPKSLFEQFRRVANIYFLVVA VSFSPLAP++A S++APL+VVIGATMAK
Sbjct: 61 STTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPFTALSIVAPLLVVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRRKQDIEANNRKV+VYG+++TFVET+WK LRVGD++KV+KDEYFPADLLLLSS
Sbjct: 121 EAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVYKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
Y+DGICYVETMNLDGETNLKLK +LE T HL+DE+S QK+ A++KCEDPNE LYSF+GT
Sbjct: 181 SYDDGICYVETMNLDGETNLKLKHALEVTIHLQDEKSLQKYKAMVKCEDPNENLYSFIGT 240
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
LQY+GK+YPLS QQILLRDSKLKNTDY+YG+V+FTGHDTKVMQN+TDPPSKRSKIERKMD
Sbjct: 241 LQYDGKEYPLSLQQILLRDSKLKNTDYIYGIVIFTGHDTKVMQNSTDPPSKRSKIERKMD 300
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
KI+Y+LFSTL+LIS GSVFFG+ETKRDI G+ RRWYL+PD+ TVFYDPRRA LAA LH
Sbjct: 301 KIIYILFSTLVLISFIGSVFFGVETKRDISSGRYRRWYLRPDNTTVFYDPRRATLAAVLH 360
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
FLT LMLYGYLIPISLY+SIE+VKVLQS+FINHD++MY+E+TD+PARARTSNLNEELGQV
Sbjct: 361 FLTALMLYGYLIPISLYVSIELVKVLQSIFINHDQEMYFEETDRPARARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480
DTILSDKTGTLTCNSMEFVKCS+ G+ YGR MTEVE+ L +R + EVD +D G
Sbjct: 421 DTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALVRRGSDVESEVDGGSSDILGQ 480
Query: 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
+ + V+S S+KGFNF+DERIM GQWVNEP+ D IQ+FFRVLAICHTAIPDV++E+ EIS
Sbjct: 481 SNDAVDSRHSIKGFNFKDERIMMGQWVNEPYPDFIQRFFRVLAICHTAIPDVDKESREIS 540
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF +QTSISLHEL+ SG+KV+RVY LLHV EF+SSRK
Sbjct: 541 YEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYRLLHVFEFSSSRK 600
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+VRN ENQLLLLCKGADSVMFER+S+HG+QFEAETR HI Y+EAGLRTLVIAYRE
Sbjct: 601 RMSVIVRNEENQLLLLCKGADSVMFERISQHGRQFEAETRDHIKSYSEAGLRTLVIAYRE 660
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY++W+ EF K KT+VT DR+ LV +AA+K+ERDLILLGATAVED+LQKGVPECI+
Sbjct: 661 LDEEEYKLWDNEFSKIKTTVTEDRDVLVDAAADKMERDLILLGATAVEDRLQKGVPECIE 720
Query: 721 KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780
KLA+A IK+WVLTGDKMETA+NIGYACSLLRQ+MKQIVITLDSPD+ +LEKQGDKE ++K
Sbjct: 721 KLARAKIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALSK 780
Query: 781 VSLESVTKQIREGISQVNSAKESKVT-------FGLVIDGKSLDFALDKKLEKMFLDLAI 833
SLES+ KQIREGISQ+ SAKES T FGL+IDGKSLD++L+K LE+ F +LAI
Sbjct: 781 ASLESIKKQIREGISQIKSAKESSNTNKGSSSGFGLIIDGKSLDYSLNKNLERSFFELAI 840
Query: 834 DCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892
+CASVICCRSSPKQKA VT+LVK GTGKTTL+IGDGANDVGMLQEADIGVGISG EGMQA
Sbjct: 841 NCASVICCRSSPKQKARVTKLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQA 900
Query: 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
VM+SD+AIAQFRFLERLLLVHGHWCYRRISMM+
Sbjct: 901 VMASDFAIAQFRFLERLLLVHGHWCYRRISMMI 933
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255567333|ref|XP_002524646.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223536007|gb|EEF37665.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1520 bits (3936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/921 (79%), Positives = 816/921 (88%), Gaps = 3/921 (0%)
Query: 6 KRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTKY 65
+R + FSK+YSF+C+K F D HAQIGQ+G++RVVYCNDPDNPE +QL YRGNYVSTTKY
Sbjct: 3 RRSLHFSKLYSFSCFKSAFKDHHAQIGQKGYSRVVYCNDPDNPEALQLKYRGNYVSTTKY 62
Query: 66 TAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVED 125
TA NFIPKSLFEQFRRVANIYFLVVA VSFSPLAPY+A SVLAPL+VVIGATMAKEGVED
Sbjct: 63 TAVNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYTALSVLAPLLVVIGATMAKEGVED 122
Query: 126 WRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185
WRRRKQDIEANNRKV+VYG+D+TF ETKWKNLRVGDLVKV KDEYFPADLLLLSS Y+DG
Sbjct: 123 WRRRKQDIEANNRKVRVYGKDYTFSETKWKNLRVGDLVKVTKDEYFPADLLLLSSSYDDG 182
Query: 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG 245
I YVETMNLDGETNLKLK +LE T+ L DEESF+ F A++KCED NE LYSFVGTL Y G
Sbjct: 183 ISYVETMNLDGETNLKLKHALEVTSSLCDEESFKNFVAMVKCEDSNENLYSFVGTLNYNG 242
Query: 246 KQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYL 305
YPLSPQQILLRDSKLKNT+Y+YGVV+FTGHDTKVMQNA DPPSKRSKIERKMDKI+Y+
Sbjct: 243 NHYPLSPQQILLRDSKLKNTEYIYGVVIFTGHDTKVMQNAVDPPSKRSKIERKMDKIIYI 302
Query: 306 LFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGL 365
LFSTLILIS GS+FFGIETKRDI+GG+ RRWYLQPD TVFYDP+RA LAAF HFLTGL
Sbjct: 303 LFSTLILISFVGSLFFGIETKRDINGGEYRRWYLQPDVTTVFYDPQRASLAAFFHFLTGL 362
Query: 366 MLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILS 425
MLYGYLIPISLY+SIEIVKVLQS+FIN D+DMYYE+TD+PA ARTSNLNEELGQVDTILS
Sbjct: 363 MLYGYLIPISLYVSIEIVKVLQSIFINQDQDMYYEETDRPAHARTSNLNEELGQVDTILS 422
Query: 426 DKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 485
DKTGTLTCNSMEFVKCS+AG AYGR MTEVER LAKR + E D D P NGN
Sbjct: 423 DKTGTLTCNSMEFVKCSIAGSAYGRGMTEVERALAKRINDGLPEAGDDSADQPDDNGNTG 482
Query: 486 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAES 545
GKS+KGFNFRDERIMNGQW+NEP SDVIQKFF+VLAICHTA+P+ +E++GEI YEAES
Sbjct: 483 YPGKSIKGFNFRDERIMNGQWINEPQSDVIQKFFQVLAICHTAVPEKDEKSGEIFYEAES 542
Query: 546 PDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVM 605
PDEAAFVIAAREVGF+ +QTSISL+ELDP +G+KV R+Y+LL VLEF+SSRKRMSV+
Sbjct: 543 PDEAAFVIAAREVGFELCERTQTSISLYELDPAAGKKVKRMYQLLQVLEFSSSRKRMSVV 602
Query: 606 VRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDE 665
VRN EN+L LL KGADSV+FERLSK G+ FE +T+ HI RYAEAGLRTLVIAYREL EDE
Sbjct: 603 VRNVENKLFLLSKGADSVIFERLSKDGRLFERKTKEHIKRYAEAGLRTLVIAYRELDEDE 662
Query: 666 YRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQA 725
Y IWEK+F +AK +VT+DR+ LV A+KIERDL+LLGATAVEDKLQKGVPECI+ LAQA
Sbjct: 663 YGIWEKDFSEAKATVTADRDVLVDEIADKIERDLVLLGATAVEDKLQKGVPECIETLAQA 722
Query: 726 GIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLES 785
GIK+WVLTGDKMETA+NIGYACSLLRQEMKQI+ITLDSPD+EALEKQGDKE I+K S S
Sbjct: 723 GIKIWVLTGDKMETAVNIGYACSLLRQEMKQIIITLDSPDIEALEKQGDKEAISKASFRS 782
Query: 786 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP 845
V +QI G SQ+ +KES +FGLV+DGK+L ALDK LEK FL+LA+ CASVICCRS+P
Sbjct: 783 VMEQISGGKSQL--SKESSTSFGLVVDGKALAIALDKSLEKKFLELALGCASVICCRSTP 840
Query: 846 KQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904
K KALVTRLVK TGKTTLA+GDGANDVGMLQE+DIGVGISG EGMQAVM+SD+AIAQFR
Sbjct: 841 KHKALVTRLVKMETGKTTLAVGDGANDVGMLQESDIGVGISGAEGMQAVMASDFAIAQFR 900
Query: 905 FLERLLLVHGHWCYRRISMMV 925
FLERLLLVHGHWCYRRI++M+
Sbjct: 901 FLERLLLVHGHWCYRRIAIMI 921
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334185669|ref|NP_189425.2| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|12229655|sp|Q9LK90.1|ALA8_ARATH RecName: Full=Putative phospholipid-transporting ATPase 8; Short=AtALA8; AltName: Full=Aminophospholipid flippase 8 gi|11994492|dbj|BAB02533.1| P-type transporting ATPase-like protein [Arabidopsis thaliana] gi|332643853|gb|AEE77374.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1518 bits (3929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/933 (77%), Positives = 834/933 (89%), Gaps = 18/933 (1%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M GER++ + FSK+YSF C+KP +DH+QIG RG++RVV+CNDPDNPE +QLNYRGNYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPY+APSVLAPL++VIGATM K
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
EGVED RRRKQD+EANNRKV+V G+ TFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS
Sbjct: 121 EGVEDLRRRKQDVEANNRKVEVLGKTGTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLKLK +LE T+ DEES + F +IKCEDPNE LYSFVGT
Sbjct: 181 SYEDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGT 237
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L +EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIE+KMD
Sbjct: 238 LYFEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMD 297
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDI-DGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
+I+Y+LFS LI+I+ TGSVFFGI T+RD+ D GK+RRWYL+PD TVFYDPRRA AAF
Sbjct: 298 QIIYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFF 357
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HFLT LMLYGYLIPISLY+SIE+VKVLQS+FIN D++MY+E+TD+PARARTSNLNEELGQ
Sbjct: 358 HFLTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQ 417
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFE-VDDSQTDAP 478
VDTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVE L K+KG T E V D+++ +
Sbjct: 418 VDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLS- 476
Query: 479 GLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGE 538
++ K+VKGFNF DERI++GQW+N+P++++IQKFFRVLAICHTAIPDVN +TGE
Sbjct: 477 ------IKEQKAVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGE 530
Query: 539 ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSS 598
I+YEAESPDEAAFVIA+RE+GF+FF SQTSISLHE+D ++G+KV+RVYELLHVLEF+SS
Sbjct: 531 ITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSS 590
Query: 599 RKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAY 658
RKRMSV+VRNPEN+LLLL KGADSVMF+RL+KHG+Q E ET+ HI +YAEAGLRTLVI Y
Sbjct: 591 RKRMSVIVRNPENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITY 650
Query: 659 RELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPEC 718
RE+ EDEY +WE+EFL AKT VT DR+AL+ +AA+KIE+DLILLG+TAVEDKLQKGVP+C
Sbjct: 651 REIDEDEYIVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDC 710
Query: 719 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENI 778
I+KL+QAG+K+WVLTGDK ETAINIGYACSLLR+ MKQI++TLDS D+EALEKQGDKE +
Sbjct: 711 IEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAV 770
Query: 779 TKVSLESVTKQIREGISQV-----NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833
K S +S+ KQ+REG+SQ NSAKE+ FGLVIDGKSL +ALD KLEK FL+LAI
Sbjct: 771 AKASFQSIKKQLREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAI 830
Query: 834 DCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892
C SVICCRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISG EGMQA
Sbjct: 831 RCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQA 890
Query: 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
VM+SD+AIAQFRFLERLLLVHGHWCYRRI++M+
Sbjct: 891 VMASDFAIAQFRFLERLLLVHGHWCYRRITLMI 923
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452444|ref|XP_002277689.1| PREDICTED: putative phospholipid-transporting ATPase 8-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1500 bits (3884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/926 (79%), Positives = 823/926 (88%), Gaps = 6/926 (0%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M G R R I FSK+Y+F+C + F +D +QIGQ+G+ RVVYCNDPDNPE VQLNYRGNYV
Sbjct: 1 MVGGRGRGIRFSKLYTFSCVRSSFREDRSQIGQKGYTRVVYCNDPDNPEAVQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NF+PKSLFEQFRRVANIYFLVVA VSFSPLAPYSA SVLAPL+VVIGATMAK
Sbjct: 61 STTKYTAVNFLPKSLFEQFRRVANIYFLVVACVSFSPLAPYSALSVLAPLLVVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRRKQDIEANNR+V+VY ++++F + KWK+LRVGD+VKV KDE+FPADL LLSS
Sbjct: 121 EAVEDWRRRKQDIEANNRRVQVY-RNNSFCKAKWKDLRVGDIVKVDKDEFFPADLFLLSS 179
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDG CYVETMNLDGETNLKLK +LE T+ LRDE+SFQ+F AVIKCEDPNE LYSFVGT
Sbjct: 180 SYEDGFCYVETMNLDGETNLKLKHALEETSSLRDEKSFQQFKAVIKCEDPNEDLYSFVGT 239
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L Y G + LS QQILLRDSKL+NTD +YGVV+FTGHDTKVMQNATDPPSKRSKIER+MD
Sbjct: 240 LSYNGTPHELSLQQILLRDSKLRNTDCIYGVVIFTGHDTKVMQNATDPPSKRSKIERRMD 299
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
KIVY+LFSTL+LIS GSVFFG ET++DI GGK RRWYL+PDD TVFYDP+R LAAFLH
Sbjct: 300 KIVYILFSTLVLISFIGSVFFGTETRKDISGGKYRRWYLRPDDTTVFYDPQRPVLAAFLH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
FLTGLMLYGYLIPISLY+SIEIVKVLQS+FIN D+DMYYE+TDKPA ARTSNLNEELGQ+
Sbjct: 360 FLTGLMLYGYLIPISLYVSIEIVKVLQSIFINQDQDMYYEETDKPAHARTSNLNEELGQI 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480
DTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVER LA+R +R EV D+ +D G
Sbjct: 420 DTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVERALARRN-DRPHEVGDASSDLLGD 478
Query: 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
+G I GK +KGFNFRDERIM+G+WVNEPH+DVIQ+FFRVLAICHTAIPD+NE GEIS
Sbjct: 479 SGEI-NLGKPIKGFNFRDERIMHGRWVNEPHADVIQRFFRVLAICHTAIPDINE--GEIS 535
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF QT ISLHELD SG +V+R Y+LLHVLEF SSRK
Sbjct: 536 YEAESPDEAAFVIAARELGFEFFSRKQTCISLHELDHKSGGEVDRTYKLLHVLEFKSSRK 595
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+VRNPENQLLLL KGADSVMF+RLSK G+ FEA+TR HI +YAEAGLRTLV+AYR+
Sbjct: 596 RMSVIVRNPENQLLLLSKGADSVMFDRLSKEGRMFEAQTRDHIRKYAEAGLRTLVLAYRD 655
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY WE+EF +AKTSV +D +ALV +A +KIERDLILLGATAVEDKLQKGVPECID
Sbjct: 656 LDEEEYEAWEEEFSRAKTSVGADHDALVDAACDKIERDLILLGATAVEDKLQKGVPECID 715
Query: 721 KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780
+LAQAGIK+WVLTGDKMETAINIGYACSLLRQ MKQIVITLDS D++ L KQGDKE I K
Sbjct: 716 RLAQAGIKIWVLTGDKMETAINIGYACSLLRQGMKQIVITLDSQDIDVLRKQGDKEAIAK 775
Query: 781 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVIC 840
S ES+ KQIREG SQ+ SAKE+ V+F L+IDG+SL FAL+K LEK FL+LAIDCASVIC
Sbjct: 776 ASCESIRKQIREGKSQLTSAKENSVSFALIIDGESLSFALNKNLEKSFLELAIDCASVIC 835
Query: 841 CRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899
CRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD+A
Sbjct: 836 CRSSPKQKALVTRLVKMGTGETTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDFA 895
Query: 900 IAQFRFLERLLLVHGHWCYRRISMMV 925
IAQFRFLERLLLVHGHWCYRRISMM+
Sbjct: 896 IAQFRFLERLLLVHGHWCYRRISMMI 921
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297815050|ref|XP_002875408.1| hypothetical protein ARALYDRAFT_484577 [Arabidopsis lyrata subsp. lyrata] gi|297321246|gb|EFH51667.1| hypothetical protein ARALYDRAFT_484577 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1479 bits (3829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/934 (76%), Positives = 819/934 (87%), Gaps = 36/934 (3%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M GER++ + FSK+YSF C+KP +DH+QIG RG++RVV+CNDPDNPE +QLNYRGNYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPY+APSVLAPL++VIGATM K
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
EGVED RRRKQD+EANNRKV+V G+ T+VETKWKNLRVGDLVKVHKDEYFPADLLLLSS
Sbjct: 121 EGVEDLRRRKQDVEANNRKVEVLGKTGTYVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLKLK +LE T+ DEES + F AVIKCEDPNE LYSFVGT
Sbjct: 181 SYEDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRAVIKCEDPNEHLYSFVGT 237
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L +EGKQYPLSPQQILLRDSKLKNTDYV+GVVVFTGHDTKVMQNATDPPSKRSKIE+KMD
Sbjct: 238 LYFEGKQYPLSPQQILLRDSKLKNTDYVHGVVVFTGHDTKVMQNATDPPSKRSKIEKKMD 297
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDI-DGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
+I+Y+LFS LI+I+ TGSVFFGI T+RD+ D GK+RRWYL+PD TVFYDPRRA AAF
Sbjct: 298 QIIYILFSILIVIAFTGSVFFGIVTRRDMSDDGKLRRWYLRPDQTTVFYDPRRAVAAAFF 357
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HFLT LMLYGYLIPISLY+SIE+VKVLQS+FIN D++MY+E+TD+PARARTSNLNEELGQ
Sbjct: 358 HFLTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQ 417
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEV--DDSQTDA 477
VDTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVE L K+KG E DDS +
Sbjct: 418 VDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEMALRKKKGMVPQEEVGDDSLS-- 475
Query: 478 PGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537
++ KSVKGFNF DERI++GQW+N+P++++IQKFFRVLAICHTAIPDVN +TG
Sbjct: 476 -------IKEQKSVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNNDTG 528
Query: 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTS 597
EI+YEAESPDEAAFVIA+RE+GF+FF SQTSISLHE+D ++ VYELLHVLEF+S
Sbjct: 529 EITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMT------VYELLHVLEFSS 582
Query: 598 SRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIA 657
SRKRMSV+VRNPEN+LLLL KGADSVMFERL+KHG+Q E ET+ HI +YAEAGLRTLVI
Sbjct: 583 SRKRMSVIVRNPENRLLLLSKGADSVMFERLAKHGRQNERETKEHIKKYAEAGLRTLVIT 642
Query: 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPE 717
YRE+ EDEYR+WE+EFL AKT VT DR+ L+ +AA+KIE+DLILLG+TAVEDKLQKGVP+
Sbjct: 643 YREIDEDEYRVWEEEFLNAKTLVTEDRDTLIDAAADKIEKDLILLGSTAVEDKLQKGVPD 702
Query: 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777
CI+KL+QAG+K+WVLTGDK ETAINIGYACSLLR+ MK+I+ITLDS D+EALEKQGDKE
Sbjct: 703 CIEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKKILITLDSSDIEALEKQGDKEA 762
Query: 778 ITKVSLESVTKQIREGISQV-----NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 832
+ K +REG++Q +S KE+ FGLVIDGKSL FALD KLEK FL+LA
Sbjct: 763 VAK---------LREGMTQTAAVTDDSVKENPEMFGLVIDGKSLTFALDSKLEKEFLELA 813
Query: 833 IDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 891
I C SVICCRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISG EGMQ
Sbjct: 814 IRCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQ 873
Query: 892 AVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
AVM+SD+AIAQFRFLERLLLVHGHWCYRRI++M+
Sbjct: 874 AVMASDFAIAQFRFLERLLLVHGHWCYRRIALMI 907
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147821807|emb|CAN61664.1| hypothetical protein VITISV_037830 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1474 bits (3816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/938 (77%), Positives = 817/938 (87%), Gaps = 23/938 (2%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M G R R I FSK+Y+F+C + F +D +QIGQ+G+ RVVYCNDPDNPE VQLNYRGNYV
Sbjct: 1 MVGGRGRGIRFSKLYTFSCVRSSFREDRSQIGQKGYTRVVYCNDPDNPEAVQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NF+PKSLFEQFRRVANIYFLVVA VSFSPLAPYSA SVLAPL+VVIGATMAK
Sbjct: 61 STTKYTAVNFLPKSLFEQFRRVANIYFLVVACVSFSPLAPYSALSVLAPLLVVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRRKQDIEANNR+V+VY ++++F + KWK+LRVGD+VKV KDE+FPADL LLSS
Sbjct: 121 EAVEDWRRRKQDIEANNRRVQVY-RNNSFCKAKWKDLRVGDIVKVDKDEFFPADLFLLSS 179
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDG CYVETMNLDGETNLKLK +LE T+ LRDE+SFQ+F AVIKCEDPNE LYSFVGT
Sbjct: 180 SYEDGFCYVETMNLDGETNLKLKHALEETSSLRDEKSFQQFKAVIKCEDPNEDLYSFVGT 239
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L Y G + LS QQILLRDSKL+NTD +YGVV+FTGHDTKVMQNATDPPSKRSKIER+MD
Sbjct: 240 LSYNGTPHELSLQQILLRDSKLRNTDCIYGVVIFTGHDTKVMQNATDPPSKRSKIERRMD 299
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
KIVY+LFSTL+LIS GSVFFG ET++DI GGK RRWYL+PDD TVFYDP+R LAAFLH
Sbjct: 300 KIVYILFSTLVLISFIGSVFFGTETRKDISGGKYRRWYLRPDDTTVFYDPQRPVLAAFLH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
FLTGLMLYGYLIPISLY+SIEIVKVLQS+FIN D+DMYYE+TDKPA ARTSNLNEELGQ+
Sbjct: 360 FLTGLMLYGYLIPISLYVSIEIVKVLQSIFINQDQDMYYEETDKPAHARTSNLNEELGQI 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480
DTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVER LA+R +R EV D+ +D G
Sbjct: 420 DTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVERALARRN-DRPHEVGDASSDLLGD 478
Query: 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
+G I GK +KGFNFRDERIM+G+WVNEPH+DVIQ+FFRVLAICHTAIPD+NE GEIS
Sbjct: 479 SGEI-NLGKPIKGFNFRDERIMHGRWVNEPHADVIQRFFRVLAICHTAIPDINE--GEIS 535
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF QT ISLHELD SG +V+R Y+LLHVLEF SSRK
Sbjct: 536 YEAESPDEAAFVIAARELGFEFFSRKQTCISLHELDHKSGGEVDRTYKLLHVLEFKSSRK 595
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+VRNPENQLLLL KGAD RLSK G+ FEA+TR HI +YAEAGLRTLV+AYR+
Sbjct: 596 RMSVIVRNPENQLLLLSKGAD-----RLSKEGRMFEAQTRDHIRKYAEAGLRTLVLAYRD 650
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY WE+EF +AKTSV +D +ALV +A +KIERDLILLGATAVEDKLQKGVPECID
Sbjct: 651 LDEEEYEAWEEEFSRAKTSVXADHDALVDAACDKIERDLILLGATAVEDKLQKGVPECID 710
Query: 721 KLAQAGIKVWVLTGDKMETAINIG------------YACSLLRQEMKQIVITLDSPDMEA 768
+LAQAGIK+WVLTGDKMETAINIG YACSLLRQ MKQ+VITLDS D++
Sbjct: 711 RLAQAGIKIWVLTGDKMETAINIGKLQVVTIVIPNRYACSLLRQGMKQVVITLDSQDIDV 770
Query: 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMF 828
L KQGDKE I K S ES+ KQIREG SQ+ SAKE+ V+ L+IDG+SL FAL+K LEK F
Sbjct: 771 LRKQGDKEAIAKASCESIRKQIREGKSQLXSAKENSVSXALIIDGESLSFALNKNLEKSF 830
Query: 829 LDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGV 887
L+LAIDCASVICCRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISGV
Sbjct: 831 LELAIDCASVICCRSSPKQKALVTRLVKMGTGETTLAIGDGANDVGMLQEADIGVGISGV 890
Query: 888 EGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
EGMQAVMSSD+AIAQFRFLERLLLVHGHWCYRRISMM+
Sbjct: 891 EGMQAVMSSDFAIAQFRFLERLLLVHGHWCYRRISMMI 928
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357495971|ref|XP_003618274.1| ATPase [Medicago truncatula] gi|355493289|gb|AES74492.1| ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1456 bits (3769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/933 (74%), Positives = 820/933 (87%), Gaps = 8/933 (0%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
MP K++I FSK+YSF+C+K + D H+QIG++G++RVV+CND DN E +QL Y GNYV
Sbjct: 1 MPQGGKKRIHFSKLYSFSCFKSSYRDGHSQIGKKGYSRVVHCNDADNFEAIQLKYGGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NFIPKSLFEQFRRVANIYFLVVA VSFSPLAPY+A S+ APL+ VIGATMAK
Sbjct: 61 STTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYTALSIAAPLVAVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRR QDIEANNRKV+VYG++HTFVET+WK LRVGD++KV+KDEYFP+DLLLLSS
Sbjct: 121 EAVEDWRRRTQDIEANNRKVQVYGKNHTFVETRWKKLRVGDVIKVYKDEYFPSDLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDG+CYVETMNLDGETNLKLK++LEAT L DE+S Q+F A++KCEDPNE LYSF+GT
Sbjct: 181 SYEDGVCYVETMNLDGETNLKLKQALEATTRLNDEKSLQRFRAMVKCEDPNENLYSFIGT 240
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
+YEG+++PLS QQILLRDSKL+NT+Y+ GVV+FTGHDTKVMQN+ DPPSKRSKIERKMD
Sbjct: 241 FEYEGEEHPLSLQQILLRDSKLRNTEYICGVVIFTGHDTKVMQNSVDPPSKRSKIERKMD 300
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDG-GKIRRWYLQPDDATVFYDPRRAPLAAFL 359
KI+Y+LFSTL+LIS GS+FFG++T+ DI+ G RRWYL PD+ TV+YDP+RA LA+ L
Sbjct: 301 KIIYILFSTLVLISFIGSMFFGVDTENDINNDGSYRRWYLHPDETTVYYDPKRAGLASIL 360
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HFLT LMLYGYLIPISLY+SIEIVKVLQ++FIN D++MYYE++D+PA ARTSNLNEELGQ
Sbjct: 361 HFLTALMLYGYLIPISLYVSIEIVKVLQTIFINQDQEMYYEESDRPAHARTSNLNEELGQ 420
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPG 479
VDTILSDKTGTLTCNSMEFVKCS+ GV YGR +TEVE+ LA+R E D +D
Sbjct: 421 VDTILSDKTGTLTCNSMEFVKCSIGGVQYGRGITEVEKALARRAKNGESEGDAYSSDFVN 480
Query: 480 LNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEI 539
+ ++V+S K+VKGFNF+DERIMNGQW+NEPH D+I+KFFRVLAICHTAIPDV++ +GEI
Sbjct: 481 ESSDVVDSQKTVKGFNFKDERIMNGQWINEPHPDIIEKFFRVLAICHTAIPDVDKSSGEI 540
Query: 540 SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599
SYEAESPDEAAFVIAARE+GF+FF +QTSISLHEL+ SG+KV+RVY+LLHVLEF+SSR
Sbjct: 541 SYEAESPDEAAFVIAARELGFEFFVRTQTSISLHELNHESGKKVDRVYQLLHVLEFSSSR 600
Query: 600 KRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYR 659
KRMSV+VRN EN++LLLCKGADSVMFERLS++G++FEAET HI RY+EAGLRTLVI YR
Sbjct: 601 KRMSVIVRNEENKILLLCKGADSVMFERLSQYGREFEAETNNHIKRYSEAGLRTLVITYR 660
Query: 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECI 719
ELGE+EY+ WEKEF KAKTS+ +DR+ALV +AA+K+ERDLILLGATAVED+LQKGVPECI
Sbjct: 661 ELGEEEYKQWEKEFSKAKTSLAADRDALVDAAADKMERDLILLGATAVEDRLQKGVPECI 720
Query: 720 DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 779
+KLA+AGIK+WVLTGDKMETA+NIGYACSLLRQ+MKQIVITLDS D+ ++EKQGDKE +
Sbjct: 721 EKLAKAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSSDIISIEKQGDKEALA 780
Query: 780 KVSLESVTKQIREGISQVNSAKESKVT------FGLVIDGKSLDFALDKKLEKMFLDLAI 833
K S ES+ KQI EGI Q+ S KES T L+IDG+SL+++L+ LEK F LA
Sbjct: 781 KASRESIEKQINEGILQIESTKESSDTAKEISSLALIIDGRSLEYSLNNALEKPFFKLAS 840
Query: 834 DCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892
+CASVICCRSSPKQKA VT+LVK TGKTTL+IGDGANDVGMLQEADIGVGISG EGMQA
Sbjct: 841 NCASVICCRSSPKQKARVTKLVKLETGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQA 900
Query: 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
VM+SDY+I QFRFLERLLLVHGHWCYRRISMM+
Sbjct: 901 VMASDYSIGQFRFLERLLLVHGHWCYRRISMMI 933
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224055525|ref|XP_002298522.1| aminophospholipid ATPase [Populus trichocarpa] gi|222845780|gb|EEE83327.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1430 bits (3701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/917 (74%), Positives = 797/917 (86%), Gaps = 15/917 (1%)
Query: 11 FSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANF 70
FSK+ F+C+K S++H IGQ+G++RVVYCNDPDNPE ++LNYRGNYVS TKYTA NF
Sbjct: 9 FSKLLPFSCFKSQPSENHGLIGQKGYSRVVYCNDPDNPEAIKLNYRGNYVSNTKYTALNF 68
Query: 71 IPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRK 130
IPKSLFEQFRRVAN YFLVVA VSFSPLAPY+APSV PL+VVIGATMAKEG+EDWRRRK
Sbjct: 69 IPKSLFEQFRRVANFYFLVVACVSFSPLAPYTAPSVAVPLLVVIGATMAKEGIEDWRRRK 128
Query: 131 QDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190
QDIEANNR+VKVY ++ TF ET+WK LRVGD+VKV KDEYFPADLLLLSS YEDGICYVE
Sbjct: 129 QDIEANNRRVKVYHKNSTFHETRWKKLRVGDIVKVSKDEYFPADLLLLSSSYEDGICYVE 188
Query: 191 TMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 250
TMNLDGET+LKLK +LE T+ LR+EES +KF A+IKCEDPNE+LYSFVGTL Y G YPL
Sbjct: 189 TMNLDGETDLKLKHALEVTSSLREEESLKKFMAMIKCEDPNEKLYSFVGTLYYNGYDYPL 248
Query: 251 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATD-PPSKRSKIERKMDKIVYLLFST 309
P+QILLRDSKL+NT+++YGVV+FTGHDTKVMQNA D PPSKRSKIER+MDKIVYLLFS
Sbjct: 249 LPRQILLRDSKLRNTEFIYGVVIFTGHDTKVMQNAVDPPPSKRSKIERRMDKIVYLLFSM 308
Query: 310 LILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYG 369
L+LIS GS+FFGIET +D GG+ RRWYL+PDD TVF+DP+RAP++AF HFLTGLMLYG
Sbjct: 309 LVLISFIGSIFFGIETTKDFRGGRFRRWYLRPDDTTVFFDPKRAPISAFFHFLTGLMLYG 368
Query: 370 YLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 429
YLIPISLY+SIEIVKVLQS+FIN D+DMYY++T+KPA+ARTSNLNEELGQV+ I+SDKTG
Sbjct: 369 YLIPISLYVSIEIVKVLQSIFINQDQDMYYKETNKPAQARTSNLNEELGQVEYIMSDKTG 428
Query: 430 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGK 489
TLTCNSMEFVKCS+AGVAYG MTEVER +A+ G+ E DD++ SG
Sbjct: 429 TLTCNSMEFVKCSIAGVAYGYGMTEVERAVARIAGDGPLEADDTRN-----------SGN 477
Query: 490 SVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEA 549
S+KGFNFRDERIMNG+WVNEPHSDVIQKFFR+LA+C+TA+P+ N+ETGEISYEAESPDEA
Sbjct: 478 SIKGFNFRDERIMNGKWVNEPHSDVIQKFFRILAVCNTAVPERNKETGEISYEAESPDEA 537
Query: 550 AFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP 609
AFVIAARE+GF+ F Q+SISLHEL V+G+KV RVY++L +LEF+S RKRMS +VR
Sbjct: 538 AFVIAAREIGFELFKRKQSSISLHEL--VNGEKVTRVYQILQILEFSSYRKRMSAIVRTM 595
Query: 610 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669
EN++LLLCKGADSV+FERLS G+ FEA+T+ H+ ++AEAGLRT+++AYRELGE E++ W
Sbjct: 596 ENKILLLCKGADSVIFERLSYEGRLFEAKTKEHVKKFAEAGLRTMLLAYRELGEGEHKEW 655
Query: 670 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 729
EF AK +VT+ R+ L+ A+KIERDLILLGATA+EDKLQKGVPECIDKLA+A IK+
Sbjct: 656 AAEFSNAKANVTAYRDVLMDEIADKIERDLILLGATAIEDKLQKGVPECIDKLAKATIKI 715
Query: 730 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789
WVLTGDKMETAINIGYACSLLR+ MK I+ITLD P+++ALE+QGD E I+K S +SV KQ
Sbjct: 716 WVLTGDKMETAINIGYACSLLREGMKLIIITLDLPEIKALERQGDMEAISKASFQSVQKQ 775
Query: 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 849
+ +G QV+SAKE + FGLV++GKSL FALD KLEK FL+LA+ CASV+CCRS+PKQKA
Sbjct: 776 LEDGKIQVDSAKEGRNEFGLVVEGKSLAFALDNKLEKNFLNLALACASVLCCRSTPKQKA 835
Query: 850 LVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 908
LVTRLVK + KTTLAIGDG NDV MLQEADIGVGISGVEGM+AVMSSD+AIAQF FLER
Sbjct: 836 LVTRLVKMDSSKTTLAIGDGGNDVSMLQEADIGVGISGVEGMEAVMSSDFAIAQFCFLER 895
Query: 909 LLLVHGHWCYRRISMMV 925
LLLVHGHWCYRRI+MMV
Sbjct: 896 LLLVHGHWCYRRIAMMV 912
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225423806|ref|XP_002280418.1| PREDICTED: putative phospholipid-transporting ATPase 9-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1348 bits (3490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/927 (69%), Positives = 777/927 (83%), Gaps = 7/927 (0%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M G R+ K+ SKIY++AC K DH QIGQ GF+RVV+CN+PD+ E NY NYV
Sbjct: 1 MAGGRRAKLHLSKIYTYACGKTSLKGDHEQIGQPGFSRVVFCNEPDHFEAKIRNYANNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
TTKYT A+F+PKSLFEQFRRVAN +FLV +SF+ LAPYSA S + PL++VI ATM K
Sbjct: 61 RTTKYTLASFLPKSLFEQFRRVANFFFLVTGILSFTDLAPYSAVSAVLPLVIVIAATMVK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
EGVEDW+R++QDIE NNRKVKV+ D TF +T+W+NLRVGD+VKV KD++FPAD+LLLSS
Sbjct: 121 EGVEDWQRKQQDIEVNNRKVKVHVGDGTFHDTEWRNLRVGDVVKVEKDQFFPADILLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
Y+D ICYVETM+LDGETNLK+K++LEAT+ L ++ +FQ F AVIKCEDPN LY+FVGT
Sbjct: 181 SYDDAICYVETMSLDGETNLKMKQALEATSSLNEDSNFQNFKAVIKCEDPNANLYTFVGT 240
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
++ E + PL+PQQ+LLRDSKL+NTDY+YG V+FTGHDTKV+QN+TD PSKRS++E+KMD
Sbjct: 241 MELEEQHCPLNPQQLLLRDSKLRNTDYIYGAVIFTGHDTKVIQNSTDAPSKRSRVEKKMD 300
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
K++Y LF L LIS GS+ FGI TK D+ G++ RWYL+PDD T+++DP+RAP+AA LH
Sbjct: 301 KLIYFLFFVLFLISFVGSIIFGIITKDDLKNGRMTRWYLRPDDTTIYFDPKRAPVAAILH 360
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
FLT +MLY Y+IPISLY+SIEIVKVLQS+FIN D MY ++TDKPA ARTSNLNEELGQV
Sbjct: 361 FLTAVMLYAYMIPISLYVSIEIVKVLQSIFINQDVHMYDKETDKPAHARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGE-RTFEVDDSQTDAPG 479
DTILSDKTGTLTCNSMEF+KCSVAG AYGR +TEVER +AKRKG E++ D
Sbjct: 421 DTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMAKRKGSPLAHELNGWDEDEDA 480
Query: 480 LNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEI 539
G + +KG+NF+DERI++G WVNE ++DVIQ F R+LAICHTAIP+VNE TG++
Sbjct: 481 QIGKPL-----IKGYNFKDERIIHGNWVNEHNADVIQGFLRLLAICHTAIPEVNEVTGQV 535
Query: 540 SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599
SYEAESPDEAAFVIAARE+GF+F+ +QTSISLHELDPVSG+KV RVY+LL+VLEF S+R
Sbjct: 536 SYEAESPDEAAFVIAARELGFEFYKRTQTSISLHELDPVSGKKVERVYDLLNVLEFNSTR 595
Query: 600 KRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYR 659
KRMSV+VRN E +LLLLCKGADSVMFERL K+G+QFE +TR H+N YA+AGLRTL++AYR
Sbjct: 596 KRMSVIVRNEEGKLLLLCKGADSVMFERLDKNGRQFEEDTRNHVNEYADAGLRTLILAYR 655
Query: 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECI 719
EL E+EY+ + K+F +AK+SV +DREAL+ EK+E++LILLGATAVEDKLQ GVP+CI
Sbjct: 656 ELDEEEYKEFNKKFNEAKSSVNADREALIDEVTEKMEKNLILLGATAVEDKLQHGVPDCI 715
Query: 720 DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 779
DKLAQAGIK+WVLTGDKMETAINIG+ACSLLRQ MKQI+I+L++PD++ALEK GDK I
Sbjct: 716 DKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISLETPDIKALEKVGDKAVII 775
Query: 780 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839
K S ESV QI G +QV ++ S + L+IDGKSL +AL ++ +FL+LAI CASVI
Sbjct: 776 KASKESVVHQIAAGKAQVTASSGSSEAYALIIDGKSLAYALQDDVKNLFLELAIGCASVI 835
Query: 840 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898
CCRSSPKQKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIG+GISGVEGMQAVMSSD
Sbjct: 836 CCRSSPKQKALVTRLVKLGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDI 895
Query: 899 AIAQFRFLERLLLVHGHWCYRRISMMV 925
AIAQF++LERLLLVHGHWCYRRIS+M+
Sbjct: 896 AIAQFQYLERLLLVHGHWCYRRISLMI 922
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 928 | ||||||
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.989 | 0.765 | 0.671 | 0.0 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.988 | 0.762 | 0.665 | 0.0 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.984 | 0.759 | 0.652 | 0.0 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.981 | 0.749 | 0.580 | 2.3e-284 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.459 | 0.342 | 0.619 | 1.4e-282 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.982 | 0.742 | 0.570 | 3e-282 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.508 | 0.380 | 0.580 | 4.2e-281 | |
| MGI|MGI:1330848 | 1149 | Atp8a1 "ATPase, aminophospholi | 0.423 | 0.342 | 0.431 | 1.2e-177 | |
| UNIPROTKB|Q29449 | 1149 | ATP8A1 "Probable phospholipid- | 0.423 | 0.342 | 0.429 | 2.2e-175 | |
| WB|WBGene00019166 | 1314 | tat-2 [Caenorhabditis elegans | 0.536 | 0.378 | 0.363 | 1.3e-174 |
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3286 (1161.8 bits), Expect = 0., P = 0.
Identities = 620/923 (67%), Positives = 759/923 (82%)
Query: 5 RKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTK 64
R+R++ SK+Y+ C + F DH+QIG GF+RVVYCN+PD+PE NY NYV TTK
Sbjct: 9 RRRRLQLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTK 68
Query: 65 YTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVE 124
YT A F+PKSLFEQFRRVAN YFLV ++F+PLAPY+A S + PL+ VIGATM KEGVE
Sbjct: 69 YTLATFLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVE 128
Query: 125 DWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184
DWRR+KQD E NNRKVKV+ D +F +WK L +GD+VKV K+E+FPADL+LLSS YED
Sbjct: 129 DWRRQKQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYED 188
Query: 185 GICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYE 244
ICYVETMNLDGETNLK+K+ LE T+ LRDE +F+ F A +KCEDPN LYSFVGT++ +
Sbjct: 189 AICYVETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELK 248
Query: 245 GKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVY 304
G +YPLSPQQ+LLRDSKL+NTD+++G V+FTGHDTKV+QN+TDPPSKRS IE+KMDKI+Y
Sbjct: 249 GAKYPLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIY 308
Query: 305 XXXXXXXXXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTG 364
V FG+ T+ D+ G ++RWYL+PD +++F+DP+RAP+AA HFLT
Sbjct: 309 LMFFMVITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTA 368
Query: 365 LMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTIL 424
+MLY Y IPISLY+SIEIVKVLQS+FIN D MYYE+ DKPARARTSNLNEELGQVDTIL
Sbjct: 369 VMLYSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTIL 428
Query: 425 SDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG-ERTFEVDDSQTDAPGLNGN 483
SDKTGTLTCNSMEF+KCSVAG AYGR +TEVE + +RKG F+ D++ D
Sbjct: 429 SDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEA 488
Query: 484 IVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEA 543
I E +VKGFNFRDERIMNG WV E H+DVIQKFFR+LA+CHT IP+V+E+T +ISYEA
Sbjct: 489 ITEES-TVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEA 547
Query: 544 ESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMS 603
ESPDEAAFVIAARE+GF+FF +QT+IS+ ELD VSG++V R+Y++L+VLEF S+RKRMS
Sbjct: 548 ESPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMS 607
Query: 604 VMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 663
V+V+ + +LLLLCKGAD+VMFERLSK+G++FE ETR H+N YA+AGLRTL++AYREL E
Sbjct: 608 VIVQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDE 667
Query: 664 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLA 723
EY+++ + +AK+SV++DRE+L+ EKIE+DLILLGATAVEDKLQ GVP+CIDKLA
Sbjct: 668 KEYKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLA 727
Query: 724 QAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSL 783
QAGIK+WVLTGDKMETAINIG+ACSLLRQ+MKQI+I L++P++++LEK G+K+ I K S
Sbjct: 728 QAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASK 787
Query: 784 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS 843
E+V QI G +Q+ + + F L+IDGKSL +ALD ++ +FL+LA+ CASVICCRS
Sbjct: 788 ENVLSQIINGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRS 845
Query: 844 SPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902
SPKQKALVTRLVK G GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQ
Sbjct: 846 SPKQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 905
Query: 903 FRFLERLLLVHGHWCYRRISMMV 925
FR+LERLLLVHGHWCYRRIS M+
Sbjct: 906 FRYLERLLLVHGHWCYRRISTMI 928
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3225 (1140.3 bits), Expect = 0., P = 0.
Identities = 617/927 (66%), Positives = 746/927 (80%)
Query: 2 PGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVS 61
P R+R++ SKIYS+ C K F +DH+ IG GF+RVVYCN+P +P + NY GNYV
Sbjct: 4 PSRRRRRLHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVR 63
Query: 62 TTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKE 121
+TKYT A+F PKSLFEQFRRVAN YFLV +S + L+PY A S L PL +VI ATM KE
Sbjct: 64 STKYTVASFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKE 123
Query: 122 GVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSI 181
G+EDWRR++QDIE NNRKVKV+ + F + +W+NLRVGD+V+V KDE+FPADLLLLSS
Sbjct: 124 GIEDWRRKQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSS 183
Query: 182 YEDGICYVETMNLDGETNLKLKRSLEATNHLRDEES-FQKFTAVIKCEDPNERLYSFVGT 240
YED +CYVETMNLDGETNLK+K+ LEAT+ L +++S F+ F V++CEDPN LY FVGT
Sbjct: 184 YEDSVCYVETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGT 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L E +++PLS QQILLRDSKL+NT+YVYG VVFTGHDTKV+QN+TDPPSKRS+IER MD
Sbjct: 244 LALEEERFPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMD 303
Query: 301 KIVYXXXXXXXXXXXXXXVFFGIETKRD-IDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
KI+Y + FG+ET+ D + G+ RWYL+PDDA +F+DP RAP+AA
Sbjct: 304 KIIYLMFGLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIY 363
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HF T MLY Y IPISLY+SIEIVKVLQS+FIN D MYYE+TDKPA+ARTSNLNEELG
Sbjct: 364 HFFTATMLYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGM 423
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPG 479
VDTILSDKTGTLTCNSMEF+KCS+AG AYGR +TEVER +A R G +D
Sbjct: 424 VDTILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNED------- 476
Query: 480 LNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEI 539
L+ + +SG VKGFNF DER+MNG WV +P + V+QKFFR+LA+CHTAIP+ +EE+G +
Sbjct: 477 LDVVVDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNV 536
Query: 540 SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599
SYEAESPDEAAFV+AARE GF+FF +Q IS ELD VSG+KV RVY LL+VLEF S+R
Sbjct: 537 SYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTR 596
Query: 600 KRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYR 659
KRMSV+VR+ + +LLLL KGAD+VMFERL+K+G+QFEA+T+ H+N+YA+AGLRTLV+AYR
Sbjct: 597 KRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYR 656
Query: 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECI 719
E+ E+EY + K F +AK SV+ DREAL+ +K+ERDLILLGATAVEDKLQ GVPECI
Sbjct: 657 EVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECI 716
Query: 720 DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 779
DKLAQAGIK+WVLTGDKMETAINIG+A SLLRQEMKQI+I L++P +++LEK G K+ I
Sbjct: 717 DKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIE 776
Query: 780 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839
S ESV Q++EG + + ++ S F L+IDGKSL +AL+ +++KMFLDLA CASVI
Sbjct: 777 LASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVI 836
Query: 840 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898
CCRSSPKQKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD
Sbjct: 837 CCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 896
Query: 899 AIAQFRFLERLLLVHGHWCYRRISMMV 925
AIAQFR+LERLLLVHGHWCY RI+ M+
Sbjct: 897 AIAQFRYLERLLLVHGHWCYSRIASMI 923
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3118 (1102.6 bits), Expect = 0., P = 0.
Identities = 605/927 (65%), Positives = 735/927 (79%)
Query: 5 RKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTK 64
R+R++ S IY+F K F +DH+ IG GF+RVVYCN+P++P + NY GNYV +TK
Sbjct: 5 RRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYVRSTK 64
Query: 65 YTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVE 124
YT A+FIPKSLFEQFRRVAN YFLV +S + L+PYS S L PL VI A+M KE +E
Sbjct: 65 YTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVKEAIE 124
Query: 125 DWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184
DW R+KQDIE NNRKVKV+ + F W++L+VG++V+V KDE+FPADLLLLSS YED
Sbjct: 125 DWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSSSYED 184
Query: 185 GICYVETMNLDGETNLKLKRSLEATNH-LRDEESFQKFTAVIKCEDPNERLYSFVGTLQY 243
ICYVETMNLDGETNLK+K+ LEAT+ L ++ F++ AV+KCEDPN LY+FVGTL +
Sbjct: 185 SICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHF 244
Query: 244 EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIV 303
E ++ PLS Q+LLRDSKL+NT+Y+YGVVVFTGHDTKV+QN+TDPPSKRS+IERKMDKI+
Sbjct: 245 EEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKII 304
Query: 304 YXXXXXXXXXXXXXXVFFGIETKRDI--DGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361
Y + FGIET+ D +GG+ RWYL+PD+A +F+DP RAP+AA HF
Sbjct: 305 YLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHF 364
Query: 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVD 421
T +MLY Y IPISLY+SIEIVKVLQS+FIN+D MYYE+ DKPA ARTSNLNEELG VD
Sbjct: 365 FTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVD 424
Query: 422 TILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLN 481
TILSDKTGTLTCNSMEF+KCS+AG AYGR +TEVER++A R + DD L+
Sbjct: 425 TILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDD-------LD 477
Query: 482 GNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISY 541
+ +SG +KGFNF DER+M G WV + + V+QKFFR+LA+CHTAIP+ +E TG +SY
Sbjct: 478 VVVDQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSY 537
Query: 542 EAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKR 601
EAESPDEAAFV+AARE GF+FF +Q IS ELD SG+ V RVY LL+VLEF S+RKR
Sbjct: 538 EAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKR 597
Query: 602 MSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYREL 661
MSV+VR+ + +LLLL KGAD+VMFERL+K+G++FE +TR H+N YA+AGLRTL++AYRE+
Sbjct: 598 MSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREV 657
Query: 662 GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDK 721
E+EY + K F +AK SVT+DRE+L+ E++ERDLILLGATAVEDKLQ GVP+CIDK
Sbjct: 658 DENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDK 717
Query: 722 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKV 781
LAQAGIK+WVLTGDKMETAINIG+ACSLLRQEMKQI+I L++P ++ALEK G+K+ I
Sbjct: 718 LAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHA 777
Query: 782 SLESVTKQIREG--ISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839
S ESV Q+ EG + +S+ S F L+IDGKSL +AL+ +K FLDLA CASVI
Sbjct: 778 SRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVI 837
Query: 840 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898
CCRSSPKQKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD
Sbjct: 838 CCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 897
Query: 899 AIAQFRFLERLLLVHGHWCYRRISMMV 925
AIAQFR+LERLLLVHGHWCY RIS M+
Sbjct: 898 AIAQFRYLERLLLVHGHWCYSRISSMI 924
|
|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2732 (966.8 bits), Expect = 2.3e-284, P = 2.3e-284
Identities = 542/934 (58%), Positives = 680/934 (72%)
Query: 3 GERKRKILFSKIYSFACWKPPFSD--DHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
G + K+ S IY+F C +P + D I GF+R VYCN P + L YR NYV
Sbjct: 4 GRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRSNYV 63
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STT+Y F PK L+EQF R AN YFLV A +S PL+P++ S++APL+ V+G +M K
Sbjct: 64 STTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E +EDW R QD++ N KV V+ D F KWK + VGD+VKV KD +FPADLLLLSS
Sbjct: 124 EALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLLSS 183
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLK+KRSLE T L D +SF+ FT +I+CEDPN LY+FVG
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGN 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L+YE + +PL P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE+ MD
Sbjct: 244 LEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMD 303
Query: 301 KIVYXXXXXXXXXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
I+Y F ETK + + WYL+P++ +P A F+H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
+T L+LYGYLIPISLY+SIE+VKVLQ+ FIN D MY ++ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDD--SQTDAP 478
DTILSDKTGTLTCN M+F+KCS+AG +YG +EVE A++ E + S+T P
Sbjct: 420 DTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTP 479
Query: 479 GLNGNIVESGKSV------KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDV 532
+E S+ KGF F D R+M+G W+ EPH+D I FFR+LAICHTAIP++
Sbjct: 480 RAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPEL 539
Query: 533 NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 592
NEETG+ +YEAESPDEA+F+ AA E GF FF +Q+S+ +HE SGQ + R Y++L++
Sbjct: 540 NEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNL 599
Query: 593 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLR 652
L+FTS RKRMSV+VR+ E Q+LLLCKGADS++FERL+K+G+ + T +H+N Y EAGLR
Sbjct: 600 LDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLR 659
Query: 653 TLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQ 712
TL ++YR+L E+EY W EF KAKTS+ SDR+ L+ ++ IE+DLIL+GATAVEDKLQ
Sbjct: 660 TLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQ 719
Query: 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQ 772
KGVP+CIDKLAQAG+K+WVLTGDKMETAINIGY+CSLLRQ MKQI IT+ + + + + +
Sbjct: 720 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGASQDAK 779
Query: 773 GDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 832
K+NI L +TK ++ V K+ F L+IDGK+L +AL+ +++ FL LA
Sbjct: 780 AVKDNI----LNQITKAVQ----MVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALA 831
Query: 833 IDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 891
+DCASVICCR SPKQKALVTRLVK GTGK TLAIGDGANDVGM+QEADIGVGISGVEGMQ
Sbjct: 832 VDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQ 891
Query: 892 AVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
AVM+SD++IAQFRFLERLL+VHGHWCY+RI+ M+
Sbjct: 892 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 925
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1411 (501.8 bits), Expect = 1.4e-282, Sum P(2) = 1.4e-282
Identities = 270/436 (61%), Positives = 346/436 (79%)
Query: 491 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAA 550
+KGF+F D+R+M G W+NEP+SD I F R+LA+CHTAIP+V+E+TG+ +YEAESPDE A
Sbjct: 518 IKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEAESPDEVA 577
Query: 551 FVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE 610
F++AA E GF+F +Q+S+ + E SGQ V R Y++L+VL+FTS RKRMSV+VR+ +
Sbjct: 578 FLVAAGEFGFEFTKRTQSSVFISERH--SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEK 635
Query: 611 NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 670
Q+LLLCKGADS++FERLSK+G+ + T +H+N Y EAGLRTL ++YR+L E EY IW
Sbjct: 636 GQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDETEYSIWN 695
Query: 671 KEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVW 730
EF KAKTSV +DR+ ++ ++ +E++LIL+GATAVEDKLQKGVP+CIDKLAQAG+K+W
Sbjct: 696 SEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 755
Query: 731 VLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 790
VLTGDKMETAINIGYACSLLRQ MKQI I L + ++G ++ + E++ QI
Sbjct: 756 VLTGDKMETAINIGYACSLLRQGMKQIYIALRN-------EEGSSQDPEAAARENILMQI 808
Query: 791 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKAL 850
+ K+ F L+IDGK+L +AL+ ++ FL LA+DCASVICCR SPKQKAL
Sbjct: 809 INASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRVSPKQKAL 868
Query: 851 VTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909
VTRL K GTGKTTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD++IAQFRFLERL
Sbjct: 869 VTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERL 928
Query: 910 LLVHGHWCYRRISMMV 925
L+VHGHWCY+RI+ M+
Sbjct: 929 LVVHGHWCYKRIAQMI 944
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2712 (959.7 bits), Expect = 3.0e-282, P = 3.0e-282
Identities = 539/945 (57%), Positives = 684/945 (72%)
Query: 3 GERKRKILFSKIYSFACWKPPFSD--DHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
G + K+ S +Y+F C +P + D I GF+R V+CN P + L YR NYV
Sbjct: 4 GRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRSNYV 63
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STT+Y F PKSL+EQF R AN+YFLV A +S PL+P++ S++APL+ V+G +M K
Sbjct: 64 STTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E +EDWRR QD++ N RK V+ D F + KWK + VGD+VKV KDE+FPADLLLLSS
Sbjct: 124 EALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLLLSS 183
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLK+KRSLE + L D+ESF+ F A I+CEDPN LY+FVG
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGN 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L++E + +PL P QILLRDSKL+NT YVYGVVVFTG DTKVMQN+T PSKRS+IER MD
Sbjct: 244 LEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMD 303
Query: 301 KIVYXXXXXXXXXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
I+Y F ET+ + + WYL+P + F +P A +H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETEFHMP----KMWYLRPGEPIDFTNPINPIYAGVVH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
+T L+LYGYLIPISLY+SIE+VKV Q+ FIN D MY +++ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG---ERTFEV------- 470
TILSDKTGTLTCN M+F+KCS+AG +YG +EVE AK+ E E+
Sbjct: 420 HTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQ 479
Query: 471 -------DDSQTDAPGLNG-NIVESGKS-VKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521
D S+T + G N + ++ +KGF F D R+MNG W+ E + I +FFR+
Sbjct: 480 TKVYGTWDSSRTQEIEVEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRI 539
Query: 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQ 581
LAICHTAIP++NEETG+ +YEAESPDEA+F+ AARE GF+FF +Q+S+ + E SGQ
Sbjct: 540 LAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQ 599
Query: 582 KVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 641
+ R Y++L++LEFTS RKRM+V+VR+ E Q+LLLCKGADS++FERL+K+G+ + T R
Sbjct: 600 IIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR 659
Query: 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
H+ Y EAGLRTL +AYR+L EDEY W EFLKAKTS+ SDR+ L+ + A+ IE++LIL
Sbjct: 660 HLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELIL 719
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITL 761
+GATAVEDKLQKGVP+CIDKLAQAG+K+WVLTGDKMETAINIG+ACSLLRQ M+QI IT
Sbjct: 720 IGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICIT- 778
Query: 762 DSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821
++ +G ++ +V E++ Q+ + + V K+ F L+IDGK+L +AL+
Sbjct: 779 ------SMNSEGGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALE 832
Query: 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADI 880
++ FL LA+DCASVICCR SPKQKALV RLVK GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 833 DDMKYQFLALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADI 892
Query: 881 GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
GVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ M+
Sbjct: 893 GVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 937
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1409 (501.1 bits), Expect = 4.2e-281, Sum P(2) = 4.2e-281
Identities = 281/484 (58%), Positives = 360/484 (74%)
Query: 443 VAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502
VA ++ + T+ LA K FE++ T + + + VKGF+F D R+M
Sbjct: 474 VANLSMNKGRTQRYAKLAS-KTSSDFELETVVTASDEKDQ---KQNTGVKGFSFEDNRLM 529
Query: 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQF 562
N W+NEP+SD I FFR+LA+CHTAIP+V+E+TG +YEAESPDE AF++A+RE GF+F
Sbjct: 530 NENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEF 589
Query: 563 FGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADS 622
+Q+S+ + E SGQ V+R Y++L++L+FTS RKRMS +VR+ E Q+LLLCKGADS
Sbjct: 590 TKRTQSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADS 649
Query: 623 VMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTS 682
++FERLSK G+++ T +H+N Y EAGLRTL + YR+L E EY W EF KAKTSV +
Sbjct: 650 IIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGA 709
Query: 683 DREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742
DR+ ++ ++ +E++LIL+GATAVEDKLQKGVP+CID LAQAG+K+WVLTGDKMETAIN
Sbjct: 710 DRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAIN 769
Query: 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKE 802
IGYACSLLRQ MKQI I+L + + E + E K ES+ QI + K+
Sbjct: 770 IGYACSLLRQGMKQISISLTNVE----ESSQNSEAAAK---ESILMQITNASQMIKIEKD 822
Query: 803 SKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKT 861
F L+IDGK+L +AL ++ FL LA+DCASVICCR SPKQKALVTRL K GTGKT
Sbjct: 823 PHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKT 882
Query: 862 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRI 921
TLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI
Sbjct: 883 TLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRI 942
Query: 922 SMMV 925
+ M+
Sbjct: 943 AQMI 946
|
|
| MGI|MGI:1330848 Atp8a1 "ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 827 (296.2 bits), Expect = 1.2e-177, Sum P(3) = 1.2e-177
Identities = 180/417 (43%), Positives = 253/417 (60%)
Query: 38 RVVYCNDPDNPEVVQLN-YRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFS 96
R ++ N P QL + N+VST KY F+P+ L+ QFRR AN +FL +A +
Sbjct: 37 RTIFINQP------QLTKFCNNHVSTAKYNVITFLPRFLYSQFRRAANSFFLFIALLQQI 90
Query: 97 P-LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWK 155
P ++P + L PL+ ++ KE +ED +R K D N ++ +V ++ + W+
Sbjct: 91 PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVL-RNGAWEIVHWE 149
Query: 156 NLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDE 215
+ VGD+V + EY PAD +LLSS +CY+ET NLDGETNLK+++ L AT+ ++D
Sbjct: 150 KVNVGDIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDI 209
Query: 216 ESFQKFTAVIKCEDPNERLYSFVGTLQYEGK-QYPLSPQQILLRDSKLKNTDYVYGVVVF 274
+S + + I+CE PN LY FVG ++ +G PL QILLR ++L+NT +V+G+VV+
Sbjct: 210 DSLMRISGRIECESPNRHLYDFVGNIRLDGHGTVPLGADQILLRGAQLRNTQWVHGIVVY 269
Query: 275 TGHDTKVMQNATDPPSKRSKIERKMDKIVYXXXXXXXXXXXXXXVFFGIETKRDIDGGKI 334
TGHDTK+MQN+T PP K S +ER + + V I +R GK
Sbjct: 270 TGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRH--SGK- 326
Query: 335 RRWYLQPDDATVFYDPRRAPLAAF-LHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINH 393
WYL + Y + F L+FLT ++L+ LIPISL +++E+VK Q+ FIN
Sbjct: 327 -DWYLH-----LHY----GGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINW 376
Query: 394 DRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGR 450
D DM+YE TD A ARTSNLNEELGQV I SDKTGTLTCN M+F KC++AGVAYG+
Sbjct: 377 DLDMHYEPTDTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQ 433
|
|
| UNIPROTKB|Q29449 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 819 (293.4 bits), Expect = 2.2e-175, Sum P(3) = 2.2e-175
Identities = 179/417 (42%), Positives = 252/417 (60%)
Query: 38 RVVYCNDPDNPEVVQLN-YRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFS 96
R ++ N P QL + N+VST KY F+P+ L+ QFRR AN +FL +A +
Sbjct: 37 RTIFINQP------QLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI 90
Query: 97 P-LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWK 155
P ++P + L PL+ ++ KE +ED +R K D N ++ +V ++ + W+
Sbjct: 91 PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVL-RNGAWEIVHWE 149
Query: 156 NLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDE 215
+ VGD+V + EY PAD +LLSS +CY+ET NLDGETNLK+++ L AT+ ++D
Sbjct: 150 KVNVGDIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDI 209
Query: 216 ESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQ-YPLSPQQILLRDSKLKNTDYVYGVVVF 274
+S + + I+CE PN LY FVG ++ +G+ PL QILLR ++L+NT +V+G+VV+
Sbjct: 210 DSLMRLSGRIECESPNRHLYDFVGNIRLDGRSTVPLGADQILLRGAQLRNTQWVHGIVVY 269
Query: 275 TGHDTKVMQNATDPPSKRSKIERKMDKIVYXXXXXXXXXXXXXXVFFGIETKRDIDGGKI 334
TGHDTK+MQN+T PP K S +ER + + V I +R G
Sbjct: 270 TGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRH--SG-- 325
Query: 335 RRWYLQPDDATVFYDPRRAPLAAF-LHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINH 393
R WYL + Y F L+FLT ++L+ LIPISL +++E+VK Q+ FIN
Sbjct: 326 RDWYLNLN-----YGGANN----FGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINW 376
Query: 394 DRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGR 450
D DM+YE TD A ARTSNLN ELGQV I SDKTGTLTCN M+F KC++AGVAYG+
Sbjct: 377 DLDMHYEPTDTAAMARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQ 433
|
|
| WB|WBGene00019166 tat-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 846 (302.9 bits), Expect = 1.3e-174, Sum P(3) = 1.3e-174
Identities = 192/528 (36%), Positives = 299/528 (56%)
Query: 52 QLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPL 110
Q Y N + T+KY FIP++LFEQF+R+AN YFLV+ + F P ++ S S PL
Sbjct: 33 QFKYADNVIKTSKYNIITFIPQNLFEQFQRIANFYFLVLMILQFIPQISSISWYSTAVPL 92
Query: 111 IVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEY 170
++V+ + K+G +D +R D N RK V ++ + E W N++VGD++++ +++
Sbjct: 93 VIVLAFSAIKDGYDDAQRHISDRNVNGRKSYVV-RNGSLCEEDWSNVKVGDVIRMMSNQF 151
Query: 171 FPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDE-ESFQKFTAVIKCED 229
ADLLLLS+ G+C++ETM LDGETNLK + ++ T + D+ + +F I CE
Sbjct: 152 VAADLLLLSTSEPYGVCFIETMELDGETNLKNRAAIACTQEMGDDLDGITRFDGEIICEP 211
Query: 230 PNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPP 289
PN +L F G L + +Y ++ ILLR LKNT + YGVVVF G DTK+M N+
Sbjct: 212 PNNKLDKFNGKLIWNNHEYGVNNDNILLRGCILKNTRWCYGVVVFAGKDTKLMMNSGKTK 271
Query: 290 SKRSKIERKMDKIVYXXXXXXXXXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYD 349
KR+ ++R ++ ++ + + + G+ YL DD +
Sbjct: 272 FKRTSLDRFLNILIVGIVLFLIAMCLICTILCAVW---EYQTGRYFTIYLPWDDVVPSPE 328
Query: 350 PR---RAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDK-- 404
R + L AFL F + ++L ++PISLY+S+EI++ + S++IN+D MYYE+ +K
Sbjct: 329 QRGGRQIALIAFLQFFSYIILLNTVVPISLYVSVEIIRFIHSLWINYDTQMYYENGEKSV 388
Query: 405 PARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG 464
PA+A T+ LNEELGQV + SDKTGTLT N M F KC++ G++YG + KG
Sbjct: 389 PAKAHTTTLNEELGQVQYVFSDKTGTLTRNIMTFNKCTINGISYGDIYDH--------KG 440
Query: 465 ERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAI 524
E E +D +T + + N S F F D+ +++ P D +F+R+LA+
Sbjct: 441 E-VIETND-KTKSLDFSWN----SASEPTFKFFDKNLVDATKRQVPEID---QFWRLLAL 491
Query: 525 CHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISL 572
CHT +P+ + G++ Y+A+SPDE A AAR G+ F + SI++
Sbjct: 492 CHTVMPE--RDKGQLVYQAQSPDEHALTSAARNFGYVFRARTPQSITI 537
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LK90 | ALA8_ARATH | 3, ., 6, ., 3, ., 1 | 0.7792 | 0.9859 | 0.7695 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| AT3G27870 | haloacid dehalogenase-like hydrolase family protein; haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN- ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN- metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN- integral to membrane, membrane; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Haloacid dehalogenase-like hydrolase (InterPro-IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro-IPR006539), ATPase, P-type, ATPase-ass [...] (1174 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| AT3G14460 | disease resistance protein (NBS-LRR class), putative; disease resistance protein (NBS-LRR class [...] (1424 aa) | • | 0.408 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 928 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-128 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 6e-48 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 5e-28 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 7e-26 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-21 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-18 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 9e-14 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-12 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 2e-11 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 4e-08 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 7e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-07 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 9e-07 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-06 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-06 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 4e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 9e-04 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 0.001 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.002 | |
| PRK00192 | 273 | PRK00192, PRK00192, mannosyl-3-phosphoglycerate ph | 0.002 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1208 bits (3128), Expect = 0.0
Identities = 463/875 (52%), Positives = 590/875 (67%), Gaps = 45/875 (5%)
Query: 55 YRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVV 113
+ N +STTKYT F+PK+LFEQF+R AN+YFLVVA + P L+P + + PL V
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPA 173
+ T KE +ED RRR++D E NNR +V FVE WK+LRVGD+VKV KDE PA
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 174 DLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNER 233
DLLLLSS DG+CYVET NLDGETNLKL+++LE T + DE+ + F+ I+CE PN
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 234 LYSFVGTLQYEG-KQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKR 292
LYSF G + G +QYPLSP ILLR L+NTD+V GVVV+TGHDTK+M+NAT PSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 293 SKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352
S++E++++ ++ +LF L ++ SV GI WY++ D R
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLD-----VSERN 291
Query: 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSN 412
A F FLT L+L+ LIPISLY+S+E+VK +Q+ FIN D MY+E TD PA RTSN
Sbjct: 292 AAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSN 351
Query: 413 LNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDD 472
LNEELGQV+ I SDKTGTLT N MEF KCS+AGV+YG TE++ + +R G +
Sbjct: 352 LNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENS 411
Query: 473 SQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDV 532
+ KGF F D R+++ N+P++ I +FF LA+CHT +P+
Sbjct: 412 MLVE--------------SKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEF 457
Query: 533 NEE-TGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591
N++ EI+Y+A SPDEAA V AAR+VGF FF + SISL + G+ YE+L+
Sbjct: 458 NDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLI--EMHGETKE--YEILN 513
Query: 592 VLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGL 651
VLEF S RKRMSV+VRNP+ ++ LLCKGAD+V+F+RLS G Q ET+ H+ YA GL
Sbjct: 514 VLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGL 573
Query: 652 RTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 711
RTL IAYREL E+EY W +E+ +A T++T DRE + AE IE+DLILLGATA+EDKL
Sbjct: 574 RTLCIAYRELSEEEYEEWNEEYNEASTALT-DREEKLDVVAESIEKDLILLGATAIEDKL 632
Query: 712 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEK 771
Q+GVPE I+ L QAGIK+WVLTGDK+ETAINIGY+C LL + M+QIVIT DS D +
Sbjct: 633 QEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVE 692
Query: 772 QGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDL 831
++ + + N+ +S LVIDGKSL +ALD++LEK FL L
Sbjct: 693 ------------AAIKFGLEGTSEEFNNLGDSG-NVALVIDGKSLGYALDEELEKEFLQL 739
Query: 832 AIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGM 890
A+ C +VICCR SP QKA V RLVK TGKTTLAIGDGANDV M+QEAD+GVGISG EGM
Sbjct: 740 ALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGM 799
Query: 891 QAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMV 925
QAVM+SD+AI QFRFL +LLLVHG W Y+RIS M+
Sbjct: 800 QAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMI 834
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 648 bits (1672), Expect = 0.0
Identities = 357/909 (39%), Positives = 518/909 (56%), Gaps = 61/909 (6%)
Query: 37 ARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFS 96
AR+VY NDP+ + + GN + T KY+ +F+P++LFEQF RVA IYFLV+A ++
Sbjct: 70 ARLVYLNDPEKSNE-RFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQL 128
Query: 97 P-LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWK 155
P LA + + + PL V+ T K+ EDWRR + D NNR V D F E KWK
Sbjct: 129 PQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLV-DDQFQEKKWK 187
Query: 156 NLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEAT-NHLRD 214
++RVG+++K+ ++ P D++LLS+ G+ YV+T+NLDGE+NLK + + + T + + +
Sbjct: 188 DIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPE 247
Query: 215 EESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVF 274
+E K +IKCE PN +Y F ++ +GK+ L P I+LR +LKNT + GV V+
Sbjct: 248 KE---KINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVY 304
Query: 275 TGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKI 334
G +TK M N + PSKRS++E +M+ + +L LI + + SV + +R D
Sbjct: 305 CGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDT 364
Query: 335 RRWYLQPDDATVFYDPRRAP-------LAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQ 387
+Y + D F + F FL ++++ +IPISLYIS+E+V+V Q
Sbjct: 365 IPFYRRKD----FSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQ 420
Query: 388 SVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVA 447
+ F+ D MY E ++ + R N+NE+LGQ+ + SDKTGTLT N MEF S+ GV
Sbjct: 421 AYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVD 480
Query: 448 YGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWV 507
Y RT +D + ++G I+ VK E +G+
Sbjct: 481 Y--------------SDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDT 526
Query: 508 NEPHSDVIQKFFRVLAICHTAIPDVNEETGE-----ISYEAESPDEAAFVIAAREVGFQF 562
E + FF LA C+T +P V ++T + + Y+ ESPDE A V AA GF
Sbjct: 527 EEAKH--VHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFML 584
Query: 563 FGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADS 622
+ S H + + G++ + + +L + EF S RKRMSV++ P+ + + KGAD+
Sbjct: 585 IERT----SGHIVIDIHGER--QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADT 638
Query: 623 VMFERLSKH-GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVT 681
MF + + T H++ Y+ GLRTLV+ REL + E+ W F A T++
Sbjct: 639 SMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALI 698
Query: 682 SDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741
R AL+ A +E +L +LGA+A+EDKLQ+GVPE I+ L AGIKVWVLTGDK ETAI
Sbjct: 699 G-RAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAI 757
Query: 742 NIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ----V 797
+IGY+ LL +M QI+I +S K+ ++++ + S GISQ
Sbjct: 758 SIGYSSKLLTNKMTQIIINSNS-------KESCRKSLEDALVMSKKLTTVSGISQNTGGS 810
Query: 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857
++A V L+IDG SL + LD +LE+ LA C+ V+CCR +P QKA + LVK
Sbjct: 811 SAAASDPV--ALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKN 868
Query: 858 -TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHW 916
T TLAIGDGANDV M+Q AD+GVGISG EG QAVM+SD+A+ QFRFL LLLVHGHW
Sbjct: 869 RTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHW 928
Query: 917 CYRRISMMV 925
Y+R+ M+
Sbjct: 929 NYQRMGYMI 937
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 408 bits (1050), Expect = e-128
Identities = 195/891 (21%), Positives = 312/891 (35%), Gaps = 240/891 (26%)
Query: 46 DNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVA--FVSFSPLAPYSA 103
EV + + + + + K L + + + +
Sbjct: 46 SEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVD 105
Query: 104 PSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLV 163
V+ ++V+ + + + + ++ K KV +D FVE L GD+V
Sbjct: 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIV 164
Query: 164 KVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTA 223
+ + PADL LL S V+ L GE+ K++L T A
Sbjct: 165 LLEAGDVVPADLRLLESSDL----EVDESALTGESLPVEKQALPLTK----------SDA 210
Query: 224 VIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283
+ + N +L + + + G+VV TG +T+ +
Sbjct: 211 PLGLDRDN-----------------------MLFSGTTVVSGR-AKGIVVATGFETEFGK 246
Query: 284 NATDPPSKR---SKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQ 340
A P+K+ + ++RK++K+ L L L+ G+ +
Sbjct: 247 IARLLPTKKEVKTPLQRKLNKLGKFLL-VLALVLGALVFVVGLFRGGN-------GLLES 298
Query: 341 PDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYE 400
FLT L L +P L + I L + + D +
Sbjct: 299 --------------------FLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV-- 336
Query: 401 DTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLA 460
R+ N E LG VD I SDKTGTLT N M K + G
Sbjct: 337 --------RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG-------------- 374
Query: 461 KRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520
G + D+ + + S + +F
Sbjct: 375 --------------------------------GKDIDDKDLKD--------SPALLRFLL 394
Query: 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSG 580
A+C++ P+ N Y+A P E A V A ++GF
Sbjct: 395 AAALCNSVTPEKNGW-----YQAGDPTEGALVEFAEKLGFSL----------------DL 433
Query: 581 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETR 640
+ Y +L + F S RKRMSV+V+ E + +L KGA V+ ER +
Sbjct: 434 SGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCK---------SI 484
Query: 641 RHINRYAEAGLRTLVIAYRELGEDEYRIWE---KEFLKAKTSVTSDREALVASAAEKIER 697
+ E GLRTL A +EL + R+ K+ +A+ D +IE
Sbjct: 485 GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVD----------EIES 534
Query: 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQI 757
DL+ LG T +ED ++ V E I++L +AGIKVW++TGD +ETAI I C
Sbjct: 535 DLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC---------- 584
Query: 758 VITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 817
GI E++ LVIDG LD
Sbjct: 585 -----------------------------------GI-------EAEAESALVIDGAELD 602
Query: 818 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQE 877
D++L ++ +L+ + R SP+QKA + ++ +G GDG ND L+
Sbjct: 603 ALSDEELAELVEELS------VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKA 656
Query: 878 ADIGVGISGVEGMQAVMSSD--YAIAQFRFLERLLLVHGHWCYRRISMMVK 926
AD+G+ + G EG A + + L +V G Y I +
Sbjct: 657 ADVGIAMGG-EGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFIL 706
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 6e-48
Identities = 82/345 (23%), Positives = 125/345 (36%), Gaps = 79/345 (22%)
Query: 106 VLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKV 165
+ L+ V+ K ED R D N R V + + E K+L GD+V V
Sbjct: 3 LFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVL--RNGWKEIPAKDLVPGDVVLV 60
Query: 166 HKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225
E PAD +LLS G C+V+ NL GE+N LK +L+ T + I
Sbjct: 61 KSGETVPADGVLLS-----GSCFVDESNLTGESNPVLKTALKETQ-----------SGTI 104
Query: 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNA 285
+ Y F GTL + + + T VVV TG +T
Sbjct: 105 TGDLVFAGTYVFGGTLIVV------------VTPTGILTTVGRIAVVVKTGFET------ 146
Query: 286 TDPPSKRSKIERKMDKIVYLLFS-TLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDA 344
R+ ++ K D++ +F L+L++ ++ I K
Sbjct: 147 ------RTPLQSKRDRLENFIFILFLLLLALAVFLYLFIRGWDPNSIFKA---------- 190
Query: 345 TVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDK 404
L L++ ++P +L ++ + + D + K
Sbjct: 191 ----------------LLRALIVLVIVVPPALPAAVTVALAVG------DARLA----KK 224
Query: 405 PARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYG 449
R N EELG+VD + SDKTGTLT N M + G
Sbjct: 225 GILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKED 269
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 5e-28
Identities = 58/216 (26%), Positives = 81/216 (37%), Gaps = 61/216 (28%)
Query: 534 EETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593
+ +Y + P E A + +A VG G N+ Y++L V
Sbjct: 274 LVACDNNYLSGDPMEKALLKSAELVGKADKG-------------------NKEYKILDVF 314
Query: 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRT 653
F+S KRMSV+V P+ LL KGA + ER + + + A GLR
Sbjct: 315 PFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNNYEE--------KYLELARQGLRV 366
Query: 654 LVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK 713
L A +EL E DL LG ED L+
Sbjct: 367 LAFASKEL----------------------------------EDDLEFLGLITFEDPLRP 392
Query: 714 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749
E I++L AGIKV ++TGD + TA I +
Sbjct: 393 DAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 7e-26
Identities = 100/484 (20%), Positives = 171/484 (35%), Gaps = 110/484 (22%)
Query: 418 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDA 477
G++D DKTGTLT + ++ + GV
Sbjct: 446 GKIDVCCFDKTGTLTEDGLD-----LRGVQ------------------------------ 470
Query: 478 PGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537
G S + V E S + LA CH+ + G
Sbjct: 471 ----------GLSGNQEFLKI--------VTEDSSLKPSITHKALATCHSLTKLEGKLVG 512
Query: 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQT---SISLHE--LDPVSGQKVNRVYELLHV 592
+ P + F+ G + + L V + ++
Sbjct: 513 D-------PLDKKM--------FEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRR 557
Query: 593 LEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGL 651
+F+S+ +RMSV+V E KGA + S + ++ + + Y G
Sbjct: 558 FQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP--ETVPSDYQEVLKSYTREGY 615
Query: 652 RTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 711
R L +AY+EL + +K R+A+ E +L LG E+ L
Sbjct: 616 RVLALAYKELPKLT---LQK-AQDLS------RDAV--------ESNLTFLGFIVFENPL 657
Query: 712 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEK 771
+ E I +L +A I+ ++TGD TA+++ C ++ I+ EA
Sbjct: 658 KPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILA-------EAEPP 710
Query: 772 QGDKENITK-VSLESVTK---QIREGISQVNSAKESKV--TFGLVIDGKSLDFALDKKLE 825
+ K N K ++S+ Q+ + E + + L + GK+ L
Sbjct: 711 ESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFA-VLQAHSP 769
Query: 826 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS 885
++ L L + R +P QK + L++ T GDGAND G L++AD+G+ +S
Sbjct: 770 ELLLRLLSHTT--VFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS 827
Query: 886 GVEG 889
E
Sbjct: 828 EAEA 831
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-21
Identities = 115/486 (23%), Positives = 176/486 (36%), Gaps = 121/486 (24%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG I SDKTGTLT N M SV V + +L F V +
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQM-----SVCKVV---ALDPSSSSL------NEFCVTGTT 329
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ I + V +++ + A+C+ + D NE
Sbjct: 330 -------------------YAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNE 370
Query: 535 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594
G E EAA + ++G + +S L N ++ L LE
Sbjct: 371 RKGVYEKVGE-ATEAALKVLVEKMGLPATKNGVSSKRRPALG--CNSVWNDKFKKLATLE 427
Query: 595 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFER----LSKHGQ------QFEAETRRHIN 644
F+ RK MSV+ + P L KGA + ER L+ G+ + + I
Sbjct: 428 FSRDRKSMSVLCK-PSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIK 486
Query: 645 RYAEA-GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLG 703
LR L +A++++ + + SD + E IE DL +G
Sbjct: 487 EMGTTKALRCLALAFKDIP-----------DPREEDLLSD-----PANFEAIESDLTFIG 530
Query: 704 ATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDS 763
+ D + V + I+K AGI+V ++TGD ETA I C R+ I + S
Sbjct: 531 VVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C---RR------IGIFS 578
Query: 764 PDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKK 823
PD E++T S RE ++ AK+ V+ F+
Sbjct: 579 PD----------EDVTFKSFTG-----RE-FDEMGPAKQRAACRSAVL------FS---- 612
Query: 824 LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVG 883
R P K+ + L++ G+ GDG ND L++ADIG+
Sbjct: 613 ------------------RVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIA 654
Query: 884 I-SGVE 888
+ SG E
Sbjct: 655 MGSGTE 660
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 1e-18
Identities = 76/349 (21%), Positives = 124/349 (35%), Gaps = 112/349 (32%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E +G I SDKTGTLT N VM+ V+ + GE+ F V D
Sbjct: 373 ETMGSATAICSDKTGTLTQN----------------VMSVVQGYI----GEQRFNVRDVL 412
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ P K V+
Sbjct: 413 RNVP----------KHVRN----------------------------------------- 421
Query: 535 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVY---ELLH 591
I E S + ++ + R F GS +T +L + + + V +++
Sbjct: 422 ----ILVEGISLNSSSEEVVDRGGKRAFIGS-KTECALLDFGLLLLRDYQEVRAEEKVVK 476
Query: 592 VLEFTSSRKRMSVMVRNPENQLLLLCKGADSVM----FERLSKHGQQFE------AETRR 641
+ F S RK MSV+V++ + KGA ++ +RL +G+
Sbjct: 477 IYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCAD 536
Query: 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
I A LRT+ +AYR+ +E+ + + L L
Sbjct: 537 VIEPLASDALRTICLAYRDFAPEEFPRKDYP-----------------------NKGLTL 573
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750
+G ++D L+ GV E + + +AGI V ++TGD ++TA I C +L
Sbjct: 574 IGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL 622
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 9e-14
Identities = 88/482 (18%), Positives = 151/482 (31%), Gaps = 170/482 (35%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG V+ I SDKTGTLT N M K + D
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKI--------------------------WTSDGLH 352
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
T + N E I++G ++ ++ + + +C+ A
Sbjct: 353 TMLNAV------------SLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAK--FRN 398
Query: 535 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594
E + +P + A + + G D + RV E+
Sbjct: 399 EADTL---LGNPTDVALIELLMKFGLD--------------DL--RETYIRVAEV----P 435
Query: 595 FTSSRKRMSVMVRNPENQ-LLLLCKGADSVMFER----LSKHGQQ--FEAETRRHINR-- 645
F+S RK M+V + +++ + KGA + + K G+ + R I
Sbjct: 436 FSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEA 495
Query: 646 --YAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERD-LILL 702
A AGLR + A E+ L L
Sbjct: 496 AEMASAGLRVIAFAS-----------------------------------GPEKGQLTFL 520
Query: 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLD 762
G + D + GV E + L G+++ ++TGD ETA++I +++ +
Sbjct: 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA----------RRLGMPSK 570
Query: 763 SPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822
+ G+K + Q+ + + +V
Sbjct: 571 TSQ----SVSGEKLDAMDDQ------QLSQIVPKVA------------------------ 596
Query: 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 882
+ R+SP+ K + + ++ G GDG ND L+ ADIGV
Sbjct: 597 ----------------VFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGV 640
Query: 883 GI 884
+
Sbjct: 641 AM 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 3e-12
Identities = 96/500 (19%), Positives = 165/500 (33%), Gaps = 107/500 (21%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER---TLAKRKGERTFEVD 471
E LG V+ I SDKTGT+T M + + + + G F
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPY 413
Query: 472 DSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPD 531
+ + + F+D + + D+ K A+ + A
Sbjct: 414 EYSHNEAADQDILK---------EFKD-ELKEIDLPEDIDMDLFIKLLETAALANIATVF 463
Query: 532 VNEETGEISYEAESPDEAAFVIAAR-----------EVGFQFFGSSQTSISLHELDPVSG 580
++ T + + A V A + E + + Q+S+S H P S
Sbjct: 464 KDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSA 523
Query: 581 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLL-LLCKGADSVMFERLSK-HGQQFEAE 638
Q +E + F S KRM+ + + + + KGA + E S +G+
Sbjct: 524 Q-----FEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKI 578
Query: 639 T----------RRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688
+ ++ A GLR L A + + + + + + T +R
Sbjct: 579 SPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKAD--NNDDQL----KNETLNRAT-- 630
Query: 689 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS 748
E DL LG + D + ++K QAGI V +LTGD ETA I
Sbjct: 631 ------AESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVG 684
Query: 749 LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFG 808
++ I M+++ G SQ ++ + +V
Sbjct: 685 IIPPNF----IHDRDEIMDSMVMTG---------------------SQFDALSDEEVD-- 717
Query: 809 LVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868
DL C ++ R +P+ K + + GDG
Sbjct: 718 ---------------------DLKALC--LVIARCAPQTKVKMIEALHRRKAFCAMTGDG 754
Query: 869 ANDVGMLQEADIGV--GISG 886
ND L+ A++G+ GI+G
Sbjct: 755 VNDSPSLKMANVGIAMGING 774
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 2e-11
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 20/109 (18%)
Query: 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582
A+C+ A NEE + P E+A ++ A ++G I + EL
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGD-PTESALLVFAEKLG----------IDVEELR------ 43
Query: 583 VNRVYELLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSK 630
Y + + F S RKRMS + + ++ L KGA + ER S
Sbjct: 44 --ARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCST 90
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 4e-08
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 32/153 (20%)
Query: 593 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQ------FEAETRRHINRY 646
L F R+R+SV+V + + Q LL+CKGA M ++ H + + R +
Sbjct: 445 LPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLA-VATHVRDGDTVRPLDEARRERLLAL 503
Query: 647 AEA----GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILL 702
AEA G R L++A RE+ E +A+ S T+D ERDL++
Sbjct: 504 AEAYNADGFRVLLVATREIPGGE--------SRAQYS-TAD------------ERDLVIR 542
Query: 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD 735
G D ++ I L + G+ V VLTGD
Sbjct: 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 7e-08
Identities = 40/221 (18%), Positives = 73/221 (33%), Gaps = 64/221 (28%)
Query: 110 LIVVIGATMAKEGVEDWRRRKQDIE----ANNRKVKVYGQDHTFVETKWKNLRVGDLVKV 165
L+V+I A + E +++R RK V D E L VGD+V +
Sbjct: 4 LLVLINALL--EAYQEYRARKALKALKKLLPPTAATVIR-DGKEEEIPADELVVGDIVLL 60
Query: 166 HKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225
+ PAD ++ G V+ L GE+ V
Sbjct: 61 KPGDRVPADGRIIE-----GSLEVDESALTGES-----------------------LPVE 92
Query: 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVM 282
K + +++ GT+ G + +V TG DT K+
Sbjct: 93 K--SRGDTVFA--GTVVLSG---------------------ELKVIVTATGEDTELGKIA 127
Query: 283 QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGI 323
+ + S ++ ++R +DK+ + ++L +
Sbjct: 128 RLVEEAKSAKTPLQRLLDKLA-KILVPIVLALAILVFLIWF 167
|
Length = 222 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 1e-07
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 42/155 (27%)
Query: 595 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLS-----KHG-------QQFEAETRRH 642
F R+RMSV+V L+CKGA + E L+ +H +R
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGA---LEEILNVCSQVRHNGEIVPLDDIMLRRIKRV 505
Query: 643 INRYAEAGLRTLVIAYREL--GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 700
+ GLR + +A + L E +Y+ + E DLI
Sbjct: 506 TDTLNRQGLRVVAVATKYLPAREGDYQRAD-------------------------ESDLI 540
Query: 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD 735
L G A D ++ + L +G+ V +LTGD
Sbjct: 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGD 575
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 9e-07
Identities = 66/305 (21%), Positives = 103/305 (33%), Gaps = 98/305 (32%)
Query: 593 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMF---------ERLSKHGQQFEAETRRHI 643
+ F R+R+SV+V N L+CKGA M + + ++E +
Sbjct: 412 IPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMT 471
Query: 644 NRYAEAGLRTLVIAYREL--GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
G+R + +A + L GE ++ + E LI+
Sbjct: 472 AEMNRQGIRVIAVATKTLKVGEADFTKTD-------------------------EEQLII 506
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITL 761
G D ++ E I L + GI V VLT
Sbjct: 507 EGFLGFLDPPKESTKEAIAALFKNGINVKVLT---------------------------- 538
Query: 762 DSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821
GD E +T + V GI + G I+ S D L
Sbjct: 539 -----------GDNEIVTARICQEV------GIDA------NDFLLGADIEELS-DEELA 574
Query: 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 881
++L K I R +P QK+ + L+K G T +GDG ND L++AD+G
Sbjct: 575 RELRK----------YHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVG 624
Query: 882 VGISG 886
+ +
Sbjct: 625 ISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 1e-06
Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 57/303 (18%)
Query: 595 FTSSRK-RMSV--MVRNPENQLLLLCKGADSVMFERLSK---HGQQ--FEAETRRHI-NR 645
F S+ K ++S+ + + LL+ KGA + ER S HG++ + E + N
Sbjct: 456 FNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNA 515
Query: 646 YAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGAT 705
Y E G + R LG + +++F + T D +L +G
Sbjct: 516 YLELG----GLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD--------NLCFVGLI 563
Query: 706 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD 765
++ D + VP+ + K AGIKV ++TGD TA I ++ S
Sbjct: 564 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII------------SEG 611
Query: 766 MEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE 825
E +E + NI +SQVN +++K V+ G L ++L+
Sbjct: 612 NETVEDIAARLNIP--------------VSQVNP-RDAKAC---VVHGSDLKDMTSEQLD 653
Query: 826 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV--G 883
++ ++ R+SP+QK ++ + G GDG ND L++ADIGV G
Sbjct: 654 EILKYHT----EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 709
Query: 884 ISG 886
I+G
Sbjct: 710 IAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 3e-06
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 832 AIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 891
A + + R SP+QK + ++ G GDG ND L++AD+G+ +
Sbjct: 423 AKELGIDVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------ 476
Query: 892 AVMSSDYAIAQFRFLERLLLVH 913
A ++D + + V
Sbjct: 477 AKAAADIVLLDDDLSAIVKAVK 498
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 3e-04
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 842 RSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG--VGISGVEGMQAVMSSD 897
RSSP K L+ ++K G+ GDG ND L+ AD+G +GISG E A +SD
Sbjct: 654 RSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTE--VAKEASD 709
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 4e-04
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 843 SSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGM--QAVMSSDYAI 900
+ P+ KA + R +K + + +G+GAND+ L+EAD+G+ EG+ + ++++D +
Sbjct: 77 ADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136
|
Length = 152 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 9e-04
Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 26/168 (15%)
Query: 715 VPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGD 774
V E I+ L + + + + T D ++ + +K V+ +D ++ +
Sbjct: 84 VKEIIEYLKENNLSILLYTDDGAYILNDVSEKIVREERYVKSFVLVIDDFELL------E 137
Query: 775 KENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID 834
E+I K+ + + + + E ++ S +T S L+ + +
Sbjct: 138 DEDINKILIVTDPEDLDELEKELKELFGSLITIT-----SSGPGYLE------IMPKGVS 186
Query: 835 CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 882
+ + KAL L + +A GDG ND+ ML+ A +GV
Sbjct: 187 KGTAL--------KALAKHL-GIDLEEVIAFGDGENDIEMLELAGLGV 225
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 662 GEDEYRIWEKEFLKAKTSVTSDREALVASAAEK------IERDLILLGATAVEDKLQKGV 715
G +E RI FL+ S L+ + + D LLG A+ D+L+
Sbjct: 330 GGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEA 389
Query: 716 PECIDKLAQAG-IKVWVLTGDKMETA 740
E I L +AG IK+ +LTGD A
Sbjct: 390 KEAIAALKRAGGIKLVMLTGDNRSAA 415
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.002
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA 740
L+G A+ D+L+ E I L GIKV +LTGD TA
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTA 567
|
Length = 713 |
| >gnl|CDD|234684 PRK00192, PRK00192, mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 848 KALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEG 889
+ L + G T+A+GD ND+ ML+ ADI V + G +G
Sbjct: 196 RWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDG 237
|
Length = 273 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 928 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.85 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.49 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.48 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.25 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.23 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.15 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.11 | |
| PLN02887 | 580 | hydrolase family protein | 99.07 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.07 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.06 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.03 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.98 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.97 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.94 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.87 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.87 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.82 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.79 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.77 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.65 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.58 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.55 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.53 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.52 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.52 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.5 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.48 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.45 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.41 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.37 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.35 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.34 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.28 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.26 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.23 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.22 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.21 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.12 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.07 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.01 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.94 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.9 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.83 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.79 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.75 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.74 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.68 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.66 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.65 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.59 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.59 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.5 | |
| PLN02423 | 245 | phosphomannomutase | 97.48 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.43 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.43 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.37 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.33 | |
| PLN03017 | 366 | trehalose-phosphatase | 97.29 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.22 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.22 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.21 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.21 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.17 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.04 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.03 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.01 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 96.85 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.83 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.81 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.79 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.78 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.78 | |
| PLN02151 | 354 | trehalose-phosphatase | 96.71 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.68 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 96.61 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.52 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.5 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.47 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.45 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.42 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.37 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.36 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.3 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.29 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.29 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.93 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.9 | |
| PLN02940 | 382 | riboflavin kinase | 95.88 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.84 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.58 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.52 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.46 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.23 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.21 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.17 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.17 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.07 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.03 | |
| PLN02811 | 220 | hydrolase | 94.97 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.96 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.56 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.5 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.44 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.28 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 94.22 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.17 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.95 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.87 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.63 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.54 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 93.5 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.0 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.43 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.91 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 91.45 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.42 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 90.83 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.58 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 90.37 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.9 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 89.81 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 88.69 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 88.68 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 88.23 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 87.42 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 87.37 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 86.95 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 86.58 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 86.29 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 84.88 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 84.71 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 83.98 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 83.92 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 83.42 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 82.59 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 82.08 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 81.68 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 80.86 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 80.83 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-157 Score=1394.84 Aligned_cols=852 Identities=60% Similarity=0.994 Sum_probs=764.7
Q ss_pred CCceeEEEeCCCCCccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHH
Q 002392 34 RGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVV 113 (928)
Q Consensus 34 ~~~~r~v~~n~~~~~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v 113 (928)
+..+|+|+.|++...+.+..+|++|+|+|+|||+++|||++||+||+|++|+|||++++++++|+++++++++++||+++
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 35579999999965555667899999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEecc
Q 002392 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMN 193 (928)
Q Consensus 114 l~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~ 193 (928)
+.++++||++||++|+++|+++|+.++.|+++++.++...|++|+|||+|++.++|.+|||++||+||+++|.|||+|++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999995455999999999999999999999999999999999999999999999
Q ss_pred CCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEE
Q 002392 194 LDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVV 273 (928)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv 273 (928)
|||||++|.|++...+......+.+..++|.|+||+||.++|.|.|++..++...|++++|+++|||+++||.|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999988887755667788999999999999999999999998887669999999999999999999999999
Q ss_pred EecCccceeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCc
Q 002392 274 FTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (928)
Q Consensus 274 ~tG~~Tki~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 353 (928)
+||++||+|+|...++.|++.+++.+|..+..++++++++|+++++...+|......+.. ..||+..+. .
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~---------~ 320 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE---------A 320 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch---------H
Confidence 999999999999999999999999999999999999999999999999998875432211 356665431 3
Q ss_pred hhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcccc
Q 002392 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (928)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (928)
....+..|+++++++..++|+||++++++++.+|+.++.+|.+||+++.+.++.+|+++++|+||+|+||++|||||||+
T Consensus 321 ~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~ 400 (1151)
T KOG0206|consen 321 AYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQ 400 (1151)
T ss_pred HHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCcccc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchh
Q 002392 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (928)
Q Consensus 434 n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (928)
|.|.|++|+++|..|+...++.+....++.+ . . ... ...+++.|.|+++.++.+...++..
T Consensus 401 N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~--------------~---~-~~~-~~~~~~~f~~~~~~~~~~~~~~~~~ 461 (1151)
T KOG0206|consen 401 NSMEFKKCSINGTSYGRNVTEVEAALAKRSG--------------G---D-VNE-HKIKGFTFEDSRLVDGLWSSEPQAE 461 (1151)
T ss_pred ceeeeecccccCcccccCCChhhcccCcccc--------------c---c-ccc-cccccceeccchhhccccccccCcc
Confidence 9999999999999999865543222111100 0 0 011 4466788999999999888888899
Q ss_pred HHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEee
Q 002392 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (928)
Q Consensus 514 ~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~ 593 (928)
...+|++++|+||++.++.+++.+...|+++||||.||+++|+.+|+.+..|+++.+.+...+ .+.+|++|+++
T Consensus 462 ~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g------~~~~y~lL~iL 535 (1151)
T KOG0206|consen 462 DILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG------VEETYELLNVL 535 (1151)
T ss_pred hHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc------cceeEEEEEEe
Confidence 999999999999999999876666899999999999999999999999999999999999555 25899999999
Q ss_pred cccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHH
Q 002392 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEF 673 (928)
Q Consensus 594 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~ 673 (928)
||+|.|||||||||.|+|++.+||||||++|++++........+...+|+++||.+||||||+|||+++++||.+|+++|
T Consensus 536 eF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~ 615 (1151)
T KOG0206|consen 536 EFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERY 615 (1151)
T ss_pred ccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987778889999999999999999999999999999999999999
Q ss_pred HHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccC
Q 002392 674 LKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE 753 (928)
Q Consensus 674 ~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~ 753 (928)
.+|++++ .||+++++++++.+|+||+++|.++|||+||+||+++|..|++||||+||+|||+.+||++||.+|+++.++
T Consensus 616 ~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~ 694 (1151)
T KOG0206|consen 616 NEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQD 694 (1151)
T ss_pred HHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCC
Confidence 9999999 699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhc
Q 002392 754 MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833 (928)
Q Consensus 754 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~ 833 (928)
+.++.++..+.+.. ...+... ...+.+................. ...+++|+|+++.++++++....|..++.
T Consensus 695 m~~i~i~~~~~~~~-----~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~ 767 (1151)
T KOG0206|consen 695 MKLIIINTETSEEL-----SSLDATA-ALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAK 767 (1151)
T ss_pred ceEEEEecCChhhh-----cchhhHH-HHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHH
Confidence 99999987764311 1111111 12222322222211111111111 36899999999999999988899999999
Q ss_pred cCCceEEEeeCcccHHHHHHHH-hcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhhhhh
Q 002392 834 DCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLV 912 (928)
Q Consensus 834 ~~~~~i~~r~~p~qK~~iv~~l-~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~lll~ 912 (928)
.|++++|||++|.||+.+|+.+ +..+.+++|||||+||++|||+||||||++|.|+.||.++|||.|.+|++|.+|||+
T Consensus 768 ~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV 847 (1151)
T KOG0206|consen 768 RCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV 847 (1151)
T ss_pred hcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee
Confidence 9999999999999999999999 578899999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhhcccccccC
Q 002392 913 HGHWCYRRISMMVKLP 928 (928)
Q Consensus 913 ~Gr~~~~~i~~~i~y~ 928 (928)
||||+|.|++++++|.
T Consensus 848 HGhW~Y~R~a~~ilyf 863 (1151)
T KOG0206|consen 848 HGHWSYIRLAKMILYF 863 (1151)
T ss_pred ecceeHHHHHHHHHHH
Confidence 9999999999999884
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-148 Score=1365.23 Aligned_cols=853 Identities=40% Similarity=0.640 Sum_probs=714.8
Q ss_pred CCceeEEEeCCCCCccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCCchhhHHHHH
Q 002392 34 RGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIV 112 (928)
Q Consensus 34 ~~~~r~v~~n~~~~~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~ 112 (928)
..+.|.|++|++... +...+|++|.|+|+|||+|+|||++||+||++++|+|||+++++|++| +++.+++++++||++
T Consensus 67 ~~~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~ 145 (1178)
T PLN03190 67 DEDARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAF 145 (1178)
T ss_pred cCCceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHH
Confidence 345799999987422 234479999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEec
Q 002392 113 VIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETM 192 (928)
Q Consensus 113 vl~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s 192 (928)
+++++++++++||++|+++|+.+|+++++|++ +|.+++++|++|+|||||+|++||.||||++||+|++++|.|+|||+
T Consensus 146 vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~-~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts 224 (1178)
T PLN03190 146 VLLVTAVKDAYEDWRRHRSDRIENNRLAWVLV-DDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTI 224 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEE-CCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEcc
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEE
Q 002392 193 NLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVV 272 (928)
Q Consensus 193 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvV 272 (928)
+|||||+||.|.+++.+... ......++|.|+||.||++++.|.|++.++|...+++.+|+++|||.|+||+|++|+|
T Consensus 225 ~LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvV 302 (1178)
T PLN03190 225 NLDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVA 302 (1178)
T ss_pred ccCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEE
Confidence 99999999999988766421 1223567899999999999999999999999999999999999999999999999999
Q ss_pred EEecCccceeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCC-------
Q 002392 273 VFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDAT------- 345 (928)
Q Consensus 273 v~tG~~Tki~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~------- 345 (928)
+|||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++..+|.....++ .||+.+....
T Consensus 303 VYTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~----~~yl~~~~~~~~~~~~~ 378 (1178)
T PLN03190 303 VYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDE----LDTIPFYRRKDFSEGGP 378 (1178)
T ss_pred EEechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccc----ccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999998887776432222 3444321100
Q ss_pred cccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEe
Q 002392 346 VFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILS 425 (928)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~ 425 (928)
..++...+....+..|+.+++++..+||++|++++++++++|+++|.+|.+||+++.+.++.+|+++++|+||+|+|||+
T Consensus 379 ~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfS 458 (1178)
T PLN03190 379 KNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFS 458 (1178)
T ss_pred cccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEE
Confidence 00000111123456788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhccc
Q 002392 426 DKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQ 505 (928)
Q Consensus 426 DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 505 (928)
|||||||+|+|.|++|+++|..|+......+... .......+ .... ......+.++.+....
T Consensus 459 DKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~-~~~~~~~~--------~~~~---------~~~~~~~~~~~~~~~~ 520 (1178)
T PLN03190 459 DKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDH-AGYSVEVD--------GKIL---------RPKMKVKVDPQLLELS 520 (1178)
T ss_pred cCCCccccceEEEEEEEECCEEcccccccchhhh-hccccccc--------cccc---------cccccccCCHHHHhhh
Confidence 9999999999999999999999975321110000 00000000 0000 0000011222222211
Q ss_pred C--CCCCchhHHHHHHHHHhhhcccccCCCCC--C---CceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCC
Q 002392 506 W--VNEPHSDVIQKFFRVLAICHTAIPDVNEE--T---GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPV 578 (928)
Q Consensus 506 ~--~~~~~~~~~~~~~~~l~lc~~~~~~~~~~--~---~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~ 578 (928)
. ...+..+.+.+|+.++++||++.+...++ . ..+.|+++||||.||+++|+.+|+.+..|+++.+.+...+.
T Consensus 521 ~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~- 599 (1178)
T PLN03190 521 KSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGE- 599 (1178)
T ss_pred hccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccc-
Confidence 1 11122345788999999999998853211 1 24679999999999999999999999999999998887654
Q ss_pred cccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc-chhhHHHHHHHHHHHHhcCCeeeEEE
Q 002392 579 SGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH-GQQFEAETRRHINRYAEAGLRTLVIA 657 (928)
Q Consensus 579 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~~~~Glr~l~~A 657 (928)
..+|++++++||+|+|||||||++++++++++|+||||+.|+++|+.. +...++.+.+++++|+.+|+|||++|
T Consensus 600 -----~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA 674 (1178)
T PLN03190 600 -----RQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVG 674 (1178)
T ss_pred -----eecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEE
Confidence 478999999999999999999999988999999999999999999754 33567788999999999999999999
Q ss_pred EEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 658 ~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
||.++++++.+|..+|.+|..++ .+|++.++++.+.+|+||+++|+++++|+||++++++|+.|+++||++||+|||+.
T Consensus 675 ~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~ 753 (1178)
T PLN03190 675 MRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQ 753 (1178)
T ss_pred EEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHh---h-hhhccccccccceEEEEEcc
Q 002392 738 ETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIRE---G-ISQVNSAKESKVTFGLVIDG 813 (928)
Q Consensus 738 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~vi~g 813 (928)
+||++||++|||+.+++..+.++.+..+... ..+....... ..... . ...............++++|
T Consensus 754 ~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~-------~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG 824 (1178)
T PLN03190 754 ETAISIGYSSKLLTNKMTQIIINSNSKESCR-------KSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDG 824 (1178)
T ss_pred HHHHHHHHHhCCCCCCCeeEEecCCchhhHH-------HHHHHHhhhh--hhccccccccccccccccccCCceEEEEEc
Confidence 9999999999999998888877665432110 0000000000 00000 0 00000011123456899999
Q ss_pred chhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcC-CCEEEEEcCChhcHHHHHhCCeeEEecCCcchhh
Q 002392 814 KSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892 (928)
Q Consensus 814 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~-g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~a 892 (928)
.++..+++.++.+.|.+++..|+++||||++|.||+++|+.+++. +++|+|||||+||++||++||||||++|+|+.||
T Consensus 825 ~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA 904 (1178)
T PLN03190 825 TSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQA 904 (1178)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHH
Confidence 999999888888899999999999999999999999999999665 6899999999999999999999999999999999
Q ss_pred hhcCcEeecccccchhhhhhhchhhhhhcccccccC
Q 002392 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 893 k~aAD~vi~~f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
+.+|||+|.+|++|.+||++||||+|+|++++++|+
T Consensus 905 ~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 905 VMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999884
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-139 Score=1304.36 Aligned_cols=829 Identities=55% Similarity=0.878 Sum_probs=709.0
Q ss_pred CCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCCchhhHHHHHHHHHHHhHHHHHHHHHhhhhH
Q 002392 55 YRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDI 133 (928)
Q Consensus 55 ~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~ 133 (928)
|++|.|+|+||++|+|||++||+||++++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHhcceeEEEccC-CeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccC
Q 002392 134 EANNRKVKVYGQD-HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHL 212 (928)
Q Consensus 134 ~~n~~~~~v~r~~-g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~ 212 (928)
++|+++++|+| + |++++++|++|+|||||+|++||.||||++||+|++++|.|+||||+|||||+|+.|.+...+...
T Consensus 81 ~~n~~~~~v~~-~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVLE-GHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEEC-CCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 99999999999 6 899999999999999999999999999999999999999999999999999999999998777655
Q ss_pred CChhhhccceEEEEeecCCCCceeEEEEEEECC-eEeecCcccccccCceeecCCeEEEEEEEecCccceeecCCCCCCc
Q 002392 213 RDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG-KQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSK 291 (928)
Q Consensus 213 ~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g-~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~~~~~~~~k 291 (928)
.....+..++|.|+||.||++++.|.|++.+++ ...|++.+|+++|||.++||+|++|+|+|||++||+++|...++.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 556667788999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhcc
Q 002392 292 RSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 371 (928)
Q Consensus 292 ~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 371 (928)
+|++++.+|+++.+++.+++++|++++++..+|...... ..||+..+.. ...+....+..|++++++++.+
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----cccchhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999998887777643222 2688754321 1222334566889999999999
Q ss_pred ccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCc
Q 002392 372 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRV 451 (928)
Q Consensus 372 iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~ 451 (928)
||++|++++++++.++++++++|.+|++++..+++.+|+++++|+||+|+|||+|||||||+|+|+|++|+++|..|+..
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999999999999999987777899999999999999999999999999999999999999999999854
Q ss_pred chHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccC
Q 002392 452 MTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPD 531 (928)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~ 531 (928)
..+......+..+...+.. .. .....+..+|.++.+.+....+.+..+.+.+|+.++++||++.+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~ 456 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENE-------------NS-MLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPE 456 (1057)
T ss_pred cchHHHHhhhccccccccc-------------cc-ccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCccccc
Confidence 3322111111100000000 00 000011234556555544332334456688999999999999987
Q ss_pred C-CCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeE--EEecCCCcccccceEEEEeEeecccCCcceeEEEEEc
Q 002392 532 V-NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSIS--LHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRN 608 (928)
Q Consensus 532 ~-~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 608 (928)
. ++..+.+.|+++||+|.||+++|+.+|+.+.+|+.+.+. +...+. ...|++++++||+|+|||||||+++
T Consensus 457 ~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~ 530 (1057)
T TIGR01652 457 FNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRN 530 (1057)
T ss_pred ccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEe
Confidence 5 222234789999999999999999999999999887443 433333 4789999999999999999999999
Q ss_pred CCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHH
Q 002392 609 PENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688 (928)
Q Consensus 609 ~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~ 688 (928)
+++++++|+||||+.|+++|+..++..++.+.+++++|+.+|+|||++|||.++++|+.+|.++|++|+.++ .+|++.+
T Consensus 531 ~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~ 609 (1057)
T TIGR01652 531 PDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKL 609 (1057)
T ss_pred CCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHH
Confidence 888999999999999999998654556788899999999999999999999999999999999999999988 7999999
Q ss_pred HHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhH
Q 002392 689 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA 768 (928)
Q Consensus 689 ~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~ 768 (928)
++..+.+|+||+|+|++++||+||++++++|+.|++|||++||+|||+.+||++||++|||++++...+.++++..+...
T Consensus 610 ~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~ 689 (1057)
T TIGR01652 610 DVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR 689 (1057)
T ss_pred HHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999988888777776432111
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccH
Q 002392 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK 848 (928)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK 848 (928)
.. ...+ ............ .........++++|++++.+++++..++|.+++..|+++||||++|+||
T Consensus 690 ~~----~~~i--------~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK 756 (1057)
T TIGR01652 690 SV----EAAI--------KFGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQK 756 (1057)
T ss_pred HH----HHHH--------HHHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHH
Confidence 00 0000 000000000000 0112345689999999999888777888999999999999999999999
Q ss_pred HHHHHHHhcC-CCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhhhhhhchhhhhhccccccc
Q 002392 849 ALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 849 ~~iv~~l~~~-g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+++|+.+|+. |++|+|||||+||++||++||||||+.|+|+.||+.+|||+|.+|++|.+||++|||++|+|+++++.|
T Consensus 757 ~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~ 836 (1057)
T TIGR01652 757 ADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILY 836 (1057)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 9999999776 999999999999999999999999999999999999999999999999999889999999999999987
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-134 Score=1085.20 Aligned_cols=781 Identities=37% Similarity=0.577 Sum_probs=685.2
Q ss_pred ceeEEEeCCCCCccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCCchhhHHHHHHH
Q 002392 36 FARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVVI 114 (928)
Q Consensus 36 ~~r~v~~n~~~~~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl 114 (928)
..|.+.+.... ..++.+|++|.+++.||++++|+|..|++||+.+.|+|||++++.|++| +......+++.||.|++
T Consensus 62 ~~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl 139 (1051)
T KOG0210|consen 62 HGRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVL 139 (1051)
T ss_pred cCceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHH
Confidence 34666655532 2356789999999999999999999999999999999999999999999 55556788999999999
Q ss_pred HHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccC
Q 002392 115 GATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNL 194 (928)
Q Consensus 115 ~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~L 194 (928)
++++++|+++|++|++.|+..|++.++++.++|.... ++++|+|||+|.+.+|++||||+++|.+|+.+|.|+|.|..|
T Consensus 140 ~itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQL 218 (1051)
T KOG0210|consen 140 TITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQL 218 (1051)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEecccc
Confidence 9999999999999999999999999999975665444 999999999999999999999999999999999999999999
Q ss_pred CCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECC--eEeecCcccccccCceeecCCeEEEEE
Q 002392 195 DGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG--KQYPLSPQQILLRDSKLKNTDYVYGVV 272 (928)
Q Consensus 195 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g--~~~~l~~~n~~~rgs~l~~t~~~~gvV 272 (928)
||||+||.|-|.+.++++.++..+..++ |..|.|++++|.|-||+.+.. +..+|+.+|.+|.++.+.. +.++|+|
T Consensus 219 DGETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvV 295 (1051)
T KOG0210|consen 219 DGETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVV 295 (1051)
T ss_pred CCcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEE
Confidence 9999999999999999998888877776 899999999999999999953 3579999999999999995 4599999
Q ss_pred EEecCccceeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCC
Q 002392 273 VFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352 (928)
Q Consensus 273 v~tG~~Tki~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 352 (928)
+|||.||+-+||...++.|.+.++..+|-+..+++.++++++++.....++- ..||.
T Consensus 296 vYTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~----------~~wyi------------- 352 (1051)
T KOG0210|consen 296 VYTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG----------SDWYI------------- 352 (1051)
T ss_pred EEecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC----------CchHH-------------
Confidence 9999999999999999999999999999999999999888887776544332 16886
Q ss_pred chhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccc
Q 002392 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (928)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT 432 (928)
.+++++.+++.+||++|.+.++++++..++.+..|.++ .+..+|++++.|+||+|+|+++|||||||
T Consensus 353 -------~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLT 419 (1051)
T KOG0210|consen 353 -------YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLT 419 (1051)
T ss_pred -------HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccc
Confidence 89999999999999999999999999999999988866 46899999999999999999999999999
Q ss_pred cceeEEEEEEEcCeeccCcc-hHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCc
Q 002392 433 CNSMEFVKCSVAGVAYGRVM-TEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPH 511 (928)
Q Consensus 433 ~n~m~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 511 (928)
+|+|.+++++.+...|+.+. .++++....-...... + .+.. ......+.
T Consensus 420 qNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~--~-------------------~~~~---------~~~~k~~~ 469 (1051)
T KOG0210|consen 420 QNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRN--K-------------------GKGA---------LSRVKKDM 469 (1051)
T ss_pred cchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcc--c-------------------cccc---------chhhcCcc
Confidence 99999999999999988654 3333333222111000 0 0000 00112344
Q ss_pred hhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeE
Q 002392 512 SDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591 (928)
Q Consensus 512 ~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 591 (928)
+..+.++..++|+||+++|..++ .+...|++.||||.||+++.+..|..+..|+...+.++..... ...|++|.
T Consensus 470 s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~-----~~~yqIL~ 543 (1051)
T KOG0210|consen 470 SARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDD-----ELNYQILQ 543 (1051)
T ss_pred cHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCc-----ceeEEEEE
Confidence 56788999999999999998765 3689999999999999999999999999999999999877554 68999999
Q ss_pred eecccCCcceeEEEEEcC-CCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHH
Q 002392 592 VLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 670 (928)
Q Consensus 592 ~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~ 670 (928)
+|||+|++|||++||+++ .+++.+|.||||.+|......+ +++++....+|++|+|||++|+|.++++||+.|.
T Consensus 544 vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe 618 (1051)
T KOG0210|consen 544 VFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFE 618 (1051)
T ss_pred EeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHH
Confidence 999999999999999997 7899999999999998776653 5788888999999999999999999999999999
Q ss_pred HHHHHHhhhccccHHHHHHHHHH-HhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 671 KEFLKAKTSVTSDREALVASAAE-KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 671 ~~~~~a~~~~~~~r~~~~~~~~~-~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
..|++|+-++ .||++++..+.+ .+|+||+++|++|+||+||++++-+++.||+||||+||+|||+.+||+.||++.++
T Consensus 619 ~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L 697 (1051)
T KOG0210|consen 619 EAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRL 697 (1051)
T ss_pred HHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccc
Confidence 9999999999 899999999888 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHH
Q 002392 750 LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFL 829 (928)
Q Consensus 750 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~ 829 (928)
+..++.+..+..-....... .++.. .......+++|+|+++...++ +.+++|.
T Consensus 698 ~sR~q~ihv~~~v~sr~dah------------------~eL~~--------lR~k~~~aLvi~G~Sl~~cl~-yye~Ef~ 750 (1051)
T KOG0210|consen 698 FSRGQYIHVIRSVTSRGDAH------------------NELNN--------LRRKTDCALVIDGESLEFCLK-YYEDEFI 750 (1051)
T ss_pred eecCceEEEEEecCCchHHH------------------HHHHH--------hhcCCCcEEEEcCchHHHHHH-HHHHHHH
Confidence 99999888886554211100 00000 012345789999999998875 6788899
Q ss_pred HhhccCCceEEEeeCcccHHHHHHHH-hcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchh
Q 002392 830 DLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 908 (928)
Q Consensus 830 ~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~ 908 (928)
++...+.++||||++|.||+++++.+ +..|+.|+|||||.||++|||+||+|||+-|+|+.||.-||||.|.+|+++.+
T Consensus 751 el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~r 830 (1051)
T KOG0210|consen 751 ELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSR 830 (1051)
T ss_pred HHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHH
Confidence 99999999999999999999999999 77899999999999999999999999999999999999999999999999999
Q ss_pred hhhhhchhhhhhccccccc
Q 002392 909 LLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 909 lll~~Gr~~~~~i~~~i~y 927 (928)
||++|||.+|+|.+++.+|
T Consensus 831 LLl~HGR~SYkrsa~laqf 849 (1051)
T KOG0210|consen 831 LLLWHGRNSYKRSAKLAQF 849 (1051)
T ss_pred HhhccccchHHHHHHHHHH
Confidence 9999999999999887543
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-100 Score=932.25 Aligned_cols=641 Identities=30% Similarity=0.419 Sum_probs=521.8
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCCCCCchhhHHHHHHHHHHHhHHHHHHH
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~~~~~~~~~~~l~~vl~i~~~~~~~~~~ 126 (928)
.+|+..||.|.+...+...+. +.++.||.+++++.++++++++++. +.+.. .....++++++++.+..+++++
T Consensus 51 ~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 51 KRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHHH
Confidence 467788999999977654433 7888999999999999999999875 22211 3344455566666666778888
Q ss_pred HHhhh---hHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceee
Q 002392 127 RRRKQ---DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (928)
Q Consensus 127 ~r~~~---~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K 203 (928)
+..++ ++.+.+.+++|+| ||++++|+|++|+|||||+|++||.||||++||++++ .+||||+|||||.|+.|
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R-~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLR-DGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHhhccCceEEEe-CCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 88655 6666789999999 9999999999999999999999999999999999775 59999999999999999
Q ss_pred ccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceee
Q 002392 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~ 283 (928)
.+..... .+.|. .++..|++++||.++++. +.|+|++||.+|++++
T Consensus 201 ~~~~~~~----------------~~~~~-----------------~~d~~n~l~sGt~V~~G~-~~giVvaTG~~T~~G~ 246 (917)
T COG0474 201 QALPLTK----------------SDAPL-----------------GLDRDNMLFSGTTVVSGR-AKGIVVATGFETEFGK 246 (917)
T ss_pred ccccccc----------------ccccc-----------------cCCccceEEeCCEEEcce-EEEEEEEEcCccHHHH
Confidence 9765431 11111 045566777777776433 9999999999998877
Q ss_pred cCCC---CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHH
Q 002392 284 NATD---PPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (928)
Q Consensus 284 ~~~~---~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
+... .....+|+++.++++..+++.+.++++++.++...+... . .| ...
T Consensus 247 ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-~-------~~--------------------~~~ 298 (917)
T COG0474 247 IARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-N-------GL--------------------LES 298 (917)
T ss_pred HHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c-------cH--------------------HHH
Confidence 6644 225789999999999999999998888888776632211 1 13 337
Q ss_pred HHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEE
Q 002392 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
|.+++++++.+||++||+++++++.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|++
T Consensus 299 ~~~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~ 368 (917)
T COG0474 299 FLTALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK 368 (917)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEE
Confidence 9999999999999999999999999999999 888999999999999999999999999999999999999
Q ss_pred EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHH
Q 002392 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (928)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (928)
+++.+. +.... + ......+...+++.
T Consensus 369 ~~~~~~--~~~~~--------------------------------------------~--------~~~~~~~~~~~~l~ 394 (917)
T COG0474 369 IYINGG--GKDID--------------------------------------------D--------KDLKDSPALLRFLL 394 (917)
T ss_pred EEeCCC--ccccc--------------------------------------------c--------cccccchHHHHHHH
Confidence 998851 00000 0 00012233447899
Q ss_pred HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcc
Q 002392 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (928)
Q Consensus 521 ~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (928)
++++||++.+..+ . .+..+||+|.||++++.+.|+.+ .. ......|++++.+||+|+||
T Consensus 395 ~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~---------------~~~~~~~~~~~~~PFdS~rK 453 (917)
T COG0474 395 AAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL---------------SGLEVEYPILAEIPFDSERK 453 (917)
T ss_pred HHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH---------------HHHhhhcceeEEecCCCCce
Confidence 9999999988654 2 56678999999999999998744 10 11235678899999999999
Q ss_pred eeEEEEEcCCCcEEEEEecCchhhHHHhcc------cchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHH
Q 002392 601 RMSVMVRNPENQLLLLCKGADSVMFERLSK------HGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFL 674 (928)
Q Consensus 601 rmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~ 674 (928)
|||+|++..++++++++||||++|+++|+. ..++.++.+.+..++|+.+|||+|++|||.++..+..
T Consensus 454 rMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~------- 526 (917)
T COG0474 454 RMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD------- 526 (917)
T ss_pred EEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccc-------
Confidence 999999987788999999999999999985 2345678889999999999999999999977664311
Q ss_pred HHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCc
Q 002392 675 KAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (928)
Q Consensus 675 ~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~ 754 (928)
. .. +.+|+||+|+|+++|+||+|+++++||+.|++|||++||+|||+..||.+||++||+..+..
T Consensus 527 ---------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~ 591 (917)
T COG0474 527 ---------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE 591 (917)
T ss_pred ---------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC
Confidence 0 11 67899999999999999999999999999999999999999999999999999999854321
Q ss_pred eEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhcc
Q 002392 755 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID 834 (928)
Q Consensus 755 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~ 834 (928)
. .++++|.+++.+.++++.+.+.+
T Consensus 592 ---------------------------------------------------~-~~vi~G~el~~l~~~el~~~~~~---- 615 (917)
T COG0474 592 ---------------------------------------------------S-ALVIDGAELDALSDEELAELVEE---- 615 (917)
T ss_pred ---------------------------------------------------c-eeEeehHHhhhcCHHHHHHHhhh----
Confidence 0 46899999998887765555544
Q ss_pred CCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccccc--chhhhhh
Q 002392 835 CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF--LERLLLV 912 (928)
Q Consensus 835 ~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~--l~~lll~ 912 (928)
+. ||||++|+||.++|+.+|+.|++|+|+|||.||+||||+|||||||+++-.+.|+++||+++.+.++ +..+ +.
T Consensus 616 ~~--VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~a-v~ 692 (917)
T COG0474 616 LS--VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLA-VV 692 (917)
T ss_pred Cc--EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHH-HH
Confidence 33 9999999999999999999999999999999999999999999999753223389999999997555 5555 99
Q ss_pred hchhhhhhccccccc
Q 002392 913 HGHWCYRRISMMVKL 927 (928)
Q Consensus 913 ~Gr~~~~~i~~~i~y 927 (928)
|||++|.|+++++.|
T Consensus 693 eGR~~~~ni~k~i~~ 707 (917)
T COG0474 693 EGRRVYVNIKKFILY 707 (917)
T ss_pred HhHHHHHHHHHHHHH
Confidence 999999999999987
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-97 Score=827.26 Aligned_cols=691 Identities=23% Similarity=0.312 Sum_probs=540.1
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
...|++.||.|++....-..++ +.+++||.++...++|+++++|++. .+|...+.+.++++++++..++++|+
T Consensus 29 v~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy~ 101 (972)
T KOG0202|consen 29 VTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEYN 101 (972)
T ss_pred HHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeehh
Confidence 3567889999999987765555 9999999999999999999999986 55666666777777888888999999
Q ss_pred HhhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeec
Q 002392 128 RRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (928)
Q Consensus 128 r~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~ 204 (928)
..|+..+++ +..++|+| +|+.+.+++++|||||||.|+-||+||||++|++..+ ..||||+|||||.|+.|.
T Consensus 102 aEkalEaLk~l~p~~~~V~R-~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~ 176 (972)
T KOG0202|consen 102 AEKALEALKELVPPMAHVLR-SGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKD 176 (972)
T ss_pred hHHHHHHHHhcCCccceEEe-cCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCccccccc
Confidence 999866664 88999999 9999999999999999999999999999999999887 899999999999999997
Q ss_pred cchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceee-
Q 002392 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ- 283 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~- 283 (928)
......+ . .++..++....|+||.+..|+ +.|+|+.||.+|.++.
T Consensus 177 t~~v~~~--~-----------~~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~I 222 (972)
T KOG0202|consen 177 TDAVPKD--E-----------NADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGKI 222 (972)
T ss_pred CccccCC--C-----------CCccccceeeEeecceeecCc---------------------eeEEEEeccccchHHHH
Confidence 6442210 0 011123444678888888888 9999999999997632
Q ss_pred --cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHH
Q 002392 284 --NATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVF-FGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (928)
Q Consensus 284 --~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
.....+..++|+|++++.+...+..++.++|+..+++ .+.+...- ++ ..|+ ...+..
T Consensus 223 ~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~--~~--g~~f----------------k~~~~~ 282 (972)
T KOG0202|consen 223 FKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPV--HG--GSWF----------------KGALYY 282 (972)
T ss_pred HHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhcccc--cc--ccch----------------hchhhh
Confidence 2344567789999999999999986666666666655 22222000 00 0232 234558
Q ss_pred HHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEE
Q 002392 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
|..++++.+.+||.+||+.+++..+++..+| ++++++||.+..+|+||.+++||+|||||||+|+|.+.+
T Consensus 283 f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~ 352 (972)
T KOG0202|consen 283 FKIAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSK 352 (972)
T ss_pred hhHHHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEE
Confidence 8899999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHH
Q 002392 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (928)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (928)
+++.+..+.... + .. ..+... ...+-.+.+.. .........+.+.++..
T Consensus 353 i~~~~~~~~~~~-~--f~---~tg~ty----------------------~~~g~v~~~~~---~~~~~~~~~~~l~~l~~ 401 (972)
T KOG0202|consen 353 IFIPDGGTATVD-E--FN---PTGTTY----------------------SPEGEVFKDGL---YEKDKAGDNDLLQELAE 401 (972)
T ss_pred EEeccccccccc-c--cc---cCCcee----------------------CCCCceEecCc---cccccccccHHHHHHHH
Confidence 998876544310 0 00 000000 00000010000 00011234567889999
Q ss_pred HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcc
Q 002392 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (928)
Q Consensus 521 ~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (928)
+.++||.+...+++. +.++-. +.|.|.||..+|++.|+.-.... ... -.+ +..+.+.....++...++||+|+||
T Consensus 402 i~~lCNda~v~~~~~-~~~~~~-G~pTE~AL~vlaeKm~l~~~~~~-~~s-~~~-~~~c~~~~~~~~~~~~elpFssdrK 476 (972)
T KOG0202|consen 402 ICALCNDATVEYNDA-DCYEKV-GEPTEGALIVLAEKMGLPGTRST-NLS-NEE-ASACNRVYSRLFKKIAELPFSSDRK 476 (972)
T ss_pred HHHhhhhhhhhcCch-hhHHhc-CCchHHHHHHHHHHcCCCcchhh-ccc-ccc-cccchhHHHHhhhheeEeecccccc
Confidence 999999998877664 334333 68999999999999998643310 110 011 2233344456778889999999999
Q ss_pred eeEEEEEcCCCc--EEEEEecCchhhHHHhccc-----------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCH---H
Q 002392 601 RMSVMVRNPENQ--LLLLCKGADSVMFERLSKH-----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGE---D 664 (928)
Q Consensus 601 rmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~---~ 664 (928)
+|||.+.++.++ ..+|+|||+|.|+++|+.. .+..++.+.+...+|+.+|||+|++|+++.+. +
T Consensus 477 ~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~ 556 (972)
T KOG0202|consen 477 SMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPD 556 (972)
T ss_pred eEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChh
Confidence 999999987654 8999999999999999542 23467889999999999999999999997774 1
Q ss_pred HHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHH
Q 002392 665 EYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG 744 (928)
Q Consensus 665 ~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia 744 (928)
+...|. -.-+...|+||+|+|++|+.||+|++++++|+.|+++||+|.|+|||+.+||.+||
T Consensus 557 ~~~l~~------------------~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~ 618 (972)
T KOG0202|consen 557 DQDLND------------------TSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA 618 (972)
T ss_pred hhhhcc------------------cccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 111110 01236789999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHH
Q 002392 745 YACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL 824 (928)
Q Consensus 745 ~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~ 824 (928)
+++|+...+.. -...+++|++++.+..+++
T Consensus 619 r~iGi~~~~ed--------------------------------------------------~~~~~~TG~efD~ls~~~~ 648 (972)
T KOG0202|consen 619 REIGIFSEDED--------------------------------------------------VSSMALTGSEFDDLSDEEL 648 (972)
T ss_pred HHhCCCcCCcc--------------------------------------------------ccccccchhhhhcCCHHHH
Confidence 99998754321 0123677888877766555
Q ss_pred HHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhcCcEeecc
Q 002392 825 EKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 825 ~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi~~ 902 (928)
..... +..+|+|++|++|.+||+.||+.|.+|+|.|||.||.|+|+.|||||||+ |+++ ||+|||.|+.|
T Consensus 649 ~~~~~------~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~D 720 (972)
T KOG0202|consen 649 DDAVR------RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLAD 720 (972)
T ss_pred HHHhh------cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEec
Confidence 54333 34599999999999999999999999999999999999999999999995 7788 99999999997
Q ss_pred ccc--chhhhhhhchhhhhhccccccc
Q 002392 903 FRF--LERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 903 f~~--l~~lll~~Gr~~~~~i~~~i~y 927 (928)
++| +..+ +.+||.+|.|++++|.|
T Consensus 721 DnFstIvaA-VEEGr~IynNik~Fir~ 746 (972)
T KOG0202|consen 721 DNFSTIVAA-VEEGRAIYNNIKNFIRY 746 (972)
T ss_pred CcHHHHHHH-HHHhHHHHHHHHHHHHH
Confidence 554 8888 89999999999999987
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-95 Score=893.19 Aligned_cols=707 Identities=19% Similarity=0.218 Sum_probs=520.1
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
.++|+.+||.|.+..++...++ +.+++||.++++++++++++++++. +.|...+.++++++++++..++++++
T Consensus 32 a~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~----~~~~~~~iIl~vv~in~~i~~~QE~~ 104 (1053)
T TIGR01523 32 AQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM----HDWIEGGVISAIIALNILIGFIQEYK 104 (1053)
T ss_pred HHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH----hhHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4678899999999998765443 8999999999999999999999985 56667777888899999999999999
Q ss_pred HhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeec
Q 002392 128 RRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (928)
Q Consensus 128 r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~ 204 (928)
.+++...+ .+.+++|+| ||++++|++++|||||||.|++||+||||++|+++++ +.||||+|||||.|+.|.
T Consensus 105 aekal~aL~~l~~~~~~ViR-dg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~ 179 (1053)
T TIGR01523 105 AEKTMDSLKNLASPMAHVIR-NGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKD 179 (1053)
T ss_pred HHHHHHHHhccCCCceEEEe-CCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceecc
Confidence 99986555 467899999 9999999999999999999999999999999999665 999999999999999998
Q ss_pred cchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceeec
Q 002392 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQN 284 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~~ 284 (928)
+...... .. . ..........|+||.+++|+ +.|+|+.||.+|.+++.
T Consensus 180 ~~~~~~~-~~--~---------~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~GkI 226 (1053)
T TIGR01523 180 AHATFGK-EE--D---------TPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIGAI 226 (1053)
T ss_pred ccccccc-cc--c---------CCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHHHH
Confidence 6421100 00 0 00011223457777777766 99999999999965332
Q ss_pred CC---CC-----C------------------------------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 002392 285 AT---DP-----P------------------------------SKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETK 326 (928)
Q Consensus 285 ~~---~~-----~------------------------------~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 326 (928)
.. .. + ..+||+|+++++++.+++.+.++++++.+++..+
T Consensus 227 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--- 303 (1053)
T TIGR01523 227 AAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--- 303 (1053)
T ss_pred HHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 21 11 0 0149999999999999888877777766543211
Q ss_pred cccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCc
Q 002392 327 RDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPA 406 (928)
Q Consensus 327 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i 406 (928)
. | ....+..++++++.++|++||++++++..+++.+| +++++
T Consensus 304 -~--------~-------------------~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~ 345 (1053)
T TIGR01523 304 -D--------V-------------------DKEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNV 345 (1053)
T ss_pred -h--------h-------------------hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCC
Confidence 0 0 01245677899999999999999999999999999 89999
Q ss_pred eeecccchhhccceeEEEecCCCccccceeEEEEEEEcCe-eccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCccc
Q 002392 407 RARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGV-AYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 485 (928)
Q Consensus 407 ~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (928)
+||+++++|+||.+++||+|||||||+|+|+++++++.+. .|....... .+. +. ..+ ............
T Consensus 346 lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~------~~~-~~-~g~--~~~~~~~~~~~~ 415 (1053)
T TIGR01523 346 IVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDD------AFN-PN-EGN--VSGIPRFSPYEY 415 (1053)
T ss_pred EeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCC------CCC-Cc-ccc--cccccccccccc
Confidence 9999999999999999999999999999999999998652 221100000 000 00 000 000000000000
Q ss_pred ccCCccCCccccchhhhcc-----c--C-CCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHH
Q 002392 486 ESGKSVKGFNFRDERIMNG-----Q--W-VNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAARE 557 (928)
Q Consensus 486 ~~~~~~~~~~~~~~~l~~~-----~--~-~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~ 557 (928)
+ .....++.+... . . .....++...+++.++++||++....++..+.+. ..++|+|.||+.+|.+
T Consensus 416 -~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~ 488 (1053)
T TIGR01523 416 -S-----HNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAKK 488 (1053)
T ss_pred -c-----ccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHHH
Confidence 0 000000000000 0 0 0000123466789999999988764332222222 2479999999999999
Q ss_pred cCcEEEee-cCC--------e-eEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCC-cEEEEEecCchhhHH
Q 002392 558 VGFQFFGS-SQT--------S-ISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN-QLLLLCKGADSVMFE 626 (928)
Q Consensus 558 ~g~~~~~~-~~~--------~-~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~~ 626 (928)
.|+..... ... . ..+.... ..+....|++++.+||+|+|||||++++.+++ ++++|+||||+.|++
T Consensus 489 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~ 565 (1053)
T TIGR01523 489 FDLPHNALTGEEDLLKSNENDQSSLSQHN---EKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIE 565 (1053)
T ss_pred cCCCcccccchhhhhhhcccccccccccc---ccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHH
Confidence 99743100 000 0 0000000 00113568999999999999999999997644 588999999999999
Q ss_pred Hhccc-----------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHh
Q 002392 627 RLSKH-----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKI 695 (928)
Q Consensus 627 ~~~~~-----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~i 695 (928)
+|+.. +++.++.+.+.+++|+.+|+|||++|||.++.+++..+ .+.. .. .+ .+.+
T Consensus 566 ~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~--------~~~~ 631 (1053)
T TIGR01523 566 CCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LN--------RATA 631 (1053)
T ss_pred hhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cc--------hhhh
Confidence 99742 22346778888999999999999999999987654221 1100 00 01 1457
Q ss_pred hcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcch
Q 002392 696 ERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDK 775 (928)
Q Consensus 696 E~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~ 775 (928)
|+||+|+|+++++|++|++++++|+.|+++||+|||+|||+..||.++|++|||+.++.. . ...
T Consensus 632 e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~--~-~~~------------- 695 (1053)
T TIGR01523 632 ESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI--H-DRD------------- 695 (1053)
T ss_pred ccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc--c-ccc-------------
Confidence 899999999999999999999999999999999999999999999999999999854310 0 000
Q ss_pred hHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH
Q 002392 776 ENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV 855 (928)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l 855 (928)
......+++|..++.+.++++.+... ...||||++|+||..+|+.+
T Consensus 696 ----------------------------~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~l 741 (1053)
T TIGR01523 696 ----------------------------EIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEAL 741 (1053)
T ss_pred ----------------------------ccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHH
Confidence 00013589999988776555444322 23599999999999999999
Q ss_pred hcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhcCcEeecc--cccchhhhhhhchhhhhhccccccc
Q 002392 856 KGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 856 ~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
++.|++|+|+|||.||++||++|||||||+ |++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|
T Consensus 742 q~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y 814 (1053)
T TIGR01523 742 HRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLH 814 (1053)
T ss_pred HhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999995 5565 99999999997 7779999 89999999999999987
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-94 Score=885.99 Aligned_cols=677 Identities=20% Similarity=0.247 Sum_probs=522.2
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CC-------CCCCchhhHHHHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LA-------PYSAPSVLAPLIVVIGATM 118 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~-------~~~~~~~~~~l~~vl~i~~ 118 (928)
.++|+.+||.|.+..++.+.++ +.|++||.++++++++++++++++. +. ..+.+...+++++++++++
T Consensus 42 ~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 118 (997)
T TIGR01106 42 AAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITG 118 (997)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHH
Confidence 4678899999999887766444 8899999999999999999997763 11 1134556677888999999
Q ss_pred hHHHHHHHHHhhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCC
Q 002392 119 AKEGVEDWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLD 195 (928)
Q Consensus 119 ~~~~~~~~~r~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~Lt 195 (928)
++.++++++++++++.++ +.+++|+| ||++++|++++|+|||+|.|++||+|||||+|+++++ +.||||+||
T Consensus 119 ~i~~~qe~ka~~~l~~l~~~~~~~~~ViR-dg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LT 193 (997)
T TIGR01106 119 CFSYYQEAKSSKIMESFKNMVPQQALVIR-DGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLT 193 (997)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccC
Confidence 999999999999988776 56899999 9999999999999999999999999999999999543 899999999
Q ss_pred CCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEe
Q 002392 196 GETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFT 275 (928)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~t 275 (928)
|||.|+.|.+++.. ..+++.+|++++||.+. .|++.|+|++|
T Consensus 194 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~-~G~~~~~V~~t 235 (997)
T TIGR01106 194 GESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCV-EGTARGIVVNT 235 (997)
T ss_pred CCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEee-eeeEEEEEEEc
Confidence 99999999875311 01223334444444433 23499999999
Q ss_pred cCccceeecCC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCC
Q 002392 276 GHDTKVMQNAT---DPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352 (928)
Q Consensus 276 G~~Tki~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 352 (928)
|.+|++++... ..+.+++|+++.++++...+..+.++++++.++++.+... .|
T Consensus 236 G~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--------------- 291 (997)
T TIGR01106 236 GDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------TW--------------- 291 (997)
T ss_pred cccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CH---------------
Confidence 99998765554 5566789999999999999888877777666555432210 12
Q ss_pred chhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccc
Q 002392 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (928)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT 432 (928)
...+..++.+++.+||++|+++++++...++.+| +++++++|+++.+|+||++++||||||||||
T Consensus 292 -----~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT 356 (997)
T TIGR01106 292 -----LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356 (997)
T ss_pred -----HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCcee
Confidence 2255667788888999999999999999999988 8889999999999999999999999999999
Q ss_pred cceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCch
Q 002392 433 CNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHS 512 (928)
Q Consensus 433 ~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 512 (928)
+|+|+|.++++++..|..+... ...+..+ ....
T Consensus 357 ~n~m~v~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~------------~~~~ 389 (997)
T TIGR01106 357 QNRMTVAHMWFDNQIHEADTTE-----------------------------------DQSGVSF------------DKSS 389 (997)
T ss_pred cCceEEEEEEECCeEEecCCcc-----------------------------------CCCCccC------------Cccc
Confidence 9999999999888766431100 0000000 0112
Q ss_pred hHHHHHHHHHhhhcccccCCCCCC--CceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEe
Q 002392 513 DVIQKFFRVLAICHTAIPDVNEET--GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELL 590 (928)
Q Consensus 513 ~~~~~~~~~l~lc~~~~~~~~~~~--~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 590 (928)
...+.++.++++||++....+... -...+..++|+|.||++++...+.... ..+..|+.+
T Consensus 390 ~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~------------------~~~~~~~~v 451 (997)
T TIGR01106 390 ATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM------------------EMRERNPKV 451 (997)
T ss_pred HHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHH------------------HHHhhCcee
Confidence 344578889999998876432211 011244579999999999986543211 013567889
Q ss_pred EeecccCCcceeEEEEEcC---CCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEE
Q 002392 591 HVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAY 658 (928)
Q Consensus 591 ~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~ 658 (928)
+.+||+|+||||++++... ++++++|+||||+.|+++|+.. +++.++.+.+.+++|+++|+|||++||
T Consensus 452 ~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~ 531 (997)
T TIGR01106 452 VEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCH 531 (997)
T ss_pred EEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 9999999999999998643 3568999999999999999741 234567788889999999999999999
Q ss_pred EccCHHHHHH-HHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 659 RELGEDEYRI-WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 659 k~l~~~~~~~-~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
|.++.+++.. |.. +++ ..+.+|+||+|+|+++++||+|++++++|++|+++||+++|+|||+.
T Consensus 532 k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~ 595 (997)
T TIGR01106 532 LYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 595 (997)
T ss_pred eecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCH
Confidence 9998765432 210 111 01345899999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhh
Q 002392 738 ETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 817 (928)
Q Consensus 738 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~ 817 (928)
.||.++|+++|++.++... . ..+. .++....... +.......+++|.+++
T Consensus 596 ~ta~~ia~~~gi~~~~~~~------~---~~i~-----------------~~~~~~~~~~----~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 596 ITAKAIAKGVGIISEGNET------V---EDIA-----------------ARLNIPVSQV----NPRDAKACVVHGSDLK 645 (997)
T ss_pred HHHHHHHHHcCCCCCCccc------h---hhhh-----------------hhcccccccc----ccccccceEEEhHHhh
Confidence 9999999999998654321 0 0000 0000000000 0011224799999998
Q ss_pred HHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhc
Q 002392 818 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMS 895 (928)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~a 895 (928)
.+.++++.+ +...+..+||||++|+||..+|+.+|+.|++|+|+|||.||++||++|||||||+ |+++ |+++
T Consensus 646 ~l~~~el~~----~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~a 719 (997)
T TIGR01106 646 DMTSEQLDE----ILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQA 719 (997)
T ss_pred hCCHHHHHH----HHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHH--HHHh
Confidence 876655444 3334455799999999999999999999999999999999999999999999995 5676 8999
Q ss_pred CcEeecc--cccchhhhhhhchhhhhhccccccc
Q 002392 896 SDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 896 AD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
||++|++ |+.+.++ +.|||++|.|+++++.|
T Consensus 720 ADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~ 752 (997)
T TIGR01106 720 ADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAY 752 (997)
T ss_pred hceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999998 7779999 99999999999999987
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-94 Score=800.77 Aligned_cols=654 Identities=23% Similarity=0.300 Sum_probs=521.0
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-C----CCCCCchhhHHHH---HHHHHHHh
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-L----APYSAPSVLAPLI---VVIGATMA 119 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~----~~~~~~~~~~~l~---~vl~i~~~ 119 (928)
.+.|++-||.|.++..+...++ .++||.|++..-+++.+++++++.. + .+.+|+.....++ .+++++++
T Consensus 125 l~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~ 201 (1034)
T KOG0204|consen 125 LERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAV 201 (1034)
T ss_pred HHHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeec
Confidence 4577888999999999876555 8899999999999999999999865 2 2335766654443 33445555
Q ss_pred HHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCcc
Q 002392 120 KEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETN 199 (928)
Q Consensus 120 ~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~ 199 (928)
.++-++.|-++.++...+.++.|+| ||+.++|+..||+||||+.|+-||.+||||+++++.+ +.||||+|||||+
T Consensus 202 nDy~qe~QF~~L~~~k~~~k~~ViR-~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd 276 (1034)
T KOG0204|consen 202 NDYRQELQFRKLQKEKRNIKFQVIR-GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESD 276 (1034)
T ss_pred chhHHhhhhhhhhhhhhceEEEEEE-CCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCc
Confidence 5555555555556566688999999 9999999999999999999999999999999999665 9999999999999
Q ss_pred ceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcc
Q 002392 200 LKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT 279 (928)
Q Consensus 200 ~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~T 279 (928)
+++|.+ ..+.++++||.+++|. +.++|+.+|.+|
T Consensus 277 ~v~k~~-------------------------~~dPfLlSGTkv~eGs---------------------gkMlVTaVGmnt 310 (1034)
T KOG0204|consen 277 HVQKSL-------------------------DKDPFLLSGTKVMEGS---------------------GKMLVTAVGMNT 310 (1034)
T ss_pred ceeccC-------------------------CCCCeEeecceeecCc---------------------ceEEEEEeeecc
Confidence 999975 3455889999999998 999999999999
Q ss_pred c---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--cccCCCcccccccCCCCCCcccCCCCch
Q 002392 280 K---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETK--RDIDGGKIRRWYLQPDDATVFYDPRRAP 354 (928)
Q Consensus 280 k---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~--~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 354 (928)
. +|.........++|+|-++++++..+..+.++++.+.+++..+... ....+++ ..|- ......
T Consensus 311 ~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~-~~~~----------~~~~~~ 379 (1034)
T KOG0204|consen 311 QWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGG-TGTT----------WSDEYI 379 (1034)
T ss_pred hHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCC-CCcc----------ccHHHH
Confidence 6 4555555666889999999999999888877777766655433221 1111100 0010 011123
Q ss_pred hHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccc
Q 002392 355 LAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCN 434 (928)
Q Consensus 355 ~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n 434 (928)
..++..|..++.++++++|.+||+++++..++++.+|. +.+.++|.++++|++|..+.||+|||||||.|
T Consensus 380 ~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMm----------kD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N 449 (1034)
T KOG0204|consen 380 QEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMM----------KDNNLVRHLDACETMGSATAICSDKTGTLTTN 449 (1034)
T ss_pred HHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHh----------cchhHHHHhHHHhhcCCceEEEecCcCceEee
Confidence 45666777888889999999999999999999999884 44567999999999999999999999999999
Q ss_pred eeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhH
Q 002392 435 SMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDV 514 (928)
Q Consensus 435 ~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 514 (928)
.|++.+.++++..|...... . ..-.+..
T Consensus 450 ~MtVV~~~~~~~~~k~~~~~-~---------------------------------------------------~~l~~~~ 477 (1034)
T KOG0204|consen 450 RMTVVQSYIGSEHYKVNSPK-S---------------------------------------------------SNLPPSL 477 (1034)
T ss_pred eEEEEeeeeccccccccCcc-c---------------------------------------------------ccCCHHH
Confidence 99999999998877632110 0 0001122
Q ss_pred HHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeec
Q 002392 515 IQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594 (928)
Q Consensus 515 ~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 594 (928)
...++.+++...+.....++..+....+.+||.|.||+.++..+|..+.. .+...++++++|
T Consensus 478 ~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~v~kv~~ 539 (1034)
T KOG0204|consen 478 LDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRPEEKVVKVYP 539 (1034)
T ss_pred HHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcchhheeEEec
Confidence 33455666655444333333333333446799999999999999987654 235677899999
Q ss_pred ccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc----------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHH
Q 002392 595 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGED 664 (928)
Q Consensus 595 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~ 664 (928)
|+|+||||+++++.+++..++|+|||.|.++..|+.. +++.+..++..++.||.+||||+|+|||+....
T Consensus 540 FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 540 FNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred cCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 9999999999999987773499999999999999864 334456888999999999999999999995432
Q ss_pred --HHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHH
Q 002392 665 --EYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (928)
Q Consensus 665 --~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ 742 (928)
+-.+|.. .+..+.+|+++|++||+||.|||++++|+.|+.|||+|.|+|||+..||.+
T Consensus 620 ~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkA 679 (1034)
T KOG0204|consen 620 PDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKA 679 (1034)
T ss_pred CCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHH
Confidence 1111210 135678999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH
Q 002392 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (928)
Q Consensus 743 ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~ 822 (928)
||.+|||+.++.. .++++|.++..+.++
T Consensus 680 IA~eCGILt~~~d----------------------------------------------------~~~lEG~eFr~~s~e 707 (1034)
T KOG0204|consen 680 IARECGILTPGGD----------------------------------------------------FLALEGKEFRELSQE 707 (1034)
T ss_pred HHHHcccccCCCc----------------------------------------------------cceecchhhhhcCHH
Confidence 9999999987643 236777777776666
Q ss_pred HHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEe--cCCcchhhhhcCcEee
Q 002392 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDYAI 900 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam--~g~e~~~ak~aAD~vi 900 (928)
+..+...++ .|.+|.+|.+|..+|+.++..|++|++.|||.||.|+|++||||.|| +|+|. ||++||+||
T Consensus 708 e~~~i~pkl------~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi 779 (1034)
T KOG0204|consen 708 ERDKIWPKL------RVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIII 779 (1034)
T ss_pred HHHhhhhhh------eeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEE
Confidence 666666665 49999999999999999999999999999999999999999999988 68888 999999999
Q ss_pred cccc--cchhhhhhhchhhhhhccccccc
Q 002392 901 AQFR--FLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 901 ~~f~--~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+|++ .+++. +.|||+.|.+|+|+++|
T Consensus 780 ~DDNFssIVk~-v~WGR~VY~nIqKFiQF 807 (1034)
T KOG0204|consen 780 LDDNFSSIVKA-VKWGRNVYDNIQKFLQF 807 (1034)
T ss_pred EcCchHHHHHH-HHhhhHHHHHHHHhhee
Confidence 9755 49999 99999999999999987
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-93 Score=875.91 Aligned_cols=643 Identities=21% Similarity=0.279 Sum_probs=494.4
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCC-------C-CCchhh---HHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAP-------Y-SAPSVL---APLIVVI 114 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~~-------~-~~~~~~---~~l~~vl 114 (928)
.++|+.+||+|.+..++.+.++ +.+++||+++++++|+++++++++. ..+ . +|+..+ +++++++
T Consensus 66 v~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~ 142 (941)
T TIGR01517 66 LERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVV 142 (941)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHh
Confidence 4678889999999999876544 8899999999999999999999873 101 1 233222 2223333
Q ss_pred HHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccC
Q 002392 115 GATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNL 194 (928)
Q Consensus 115 ~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~L 194 (928)
+++++.++.+++..++.++..++.+++|+| ||++++|++++|+|||||.|++||.|||||+|++++ .+.||||+|
T Consensus 143 ~i~~~~e~~~~~~~~~l~~~~~~~~~~ViR-dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~L 217 (941)
T TIGR01517 143 LVTAVNDYKKELQFRQLNREKSAQKIAVIR-GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESSI 217 (941)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEEE-CCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEeccc
Confidence 444444544444444444334577999999 999999999999999999999999999999999932 599999999
Q ss_pred CCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEE
Q 002392 195 DGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVF 274 (928)
Q Consensus 195 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~ 274 (928)
||||.|+.|.+++. ...|+||.+.+|. +.++|++
T Consensus 218 TGES~pv~K~~~~~-------------------------n~v~~GT~v~~G~---------------------~~~iV~~ 251 (941)
T TIGR01517 218 TGESDPIKKGAPKD-------------------------SFLLSGTVVNEGS---------------------GRMLVTA 251 (941)
T ss_pred CCCCCcccccCCCC-------------------------ceEEeCCeEEeeE---------------------EEEEEEE
Confidence 99999999986432 1568888888887 9999999
Q ss_pred ecCccc---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCC
Q 002392 275 TGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPR 351 (928)
Q Consensus 275 tG~~Tk---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 351 (928)
||.+|. +..+....+ +++|+++.++++..++..+.++++++.++++.+...... .|.. . ....
T Consensus 252 tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~------~~~~---~----~~~~ 317 (941)
T TIGR01517 252 VGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI------IRGD---G----RDTE 317 (941)
T ss_pred eCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------cccc---c----cccc
Confidence 999995 444444444 457999999999999888777777666655432110000 0000 0 0000
Q ss_pred CchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcc
Q 002392 352 RAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 431 (928)
Q Consensus 352 ~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTL 431 (928)
.....+...+..++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||++++|||||||||
T Consensus 318 ~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTL 387 (941)
T TIGR01517 318 EDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTL 387 (941)
T ss_pred hhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCce
Confidence 0112344578889999999999999999999999999888 899999999999999999999999999999
Q ss_pred ccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCc
Q 002392 432 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPH 511 (928)
Q Consensus 432 T~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 511 (928)
|+|+|++.+++..+..+.... +.. ..
T Consensus 388 T~n~m~v~~~~~~~~~~~~~~------------------------------------------------~~~------~~ 413 (941)
T TIGR01517 388 TQNVMSVVQGYIGEQRFNVRD------------------------------------------------VLR------NV 413 (941)
T ss_pred eeceEEEEEEEEecceEecCc------------------------------------------------ccc------cC
Confidence 999999999987654432110 000 00
Q ss_pred hhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeE
Q 002392 512 SDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591 (928)
Q Consensus 512 ~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 591 (928)
++...+++...++||+..+...+.. ...+..++|+|.||++++++.|..... .+..|++++
T Consensus 414 ~~~~~~~l~~~~~~~s~~~~~~~~~-~~~~~~g~p~e~All~~~~~~~~~~~~------------------~~~~~~~~~ 474 (941)
T TIGR01517 414 PKHVRNILVEGISLNSSSEEVVDRG-GKRAFIGSKTECALLGFLLLLGRDYQE------------------VRAEEKVVK 474 (941)
T ss_pred CHHHHHHHHHHHHhCCCCccccCCC-CccccCCCccHHHHHHHHHHcCCCHHH------------------HHhhchhcc
Confidence 1123345555556655544321111 112446899999999999887743211 123567888
Q ss_pred eecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc----ch-----hhHHHHHHHHHHHHhcCCeeeEEEEEccC
Q 002392 592 VLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH----GQ-----QFEAETRRHINRYAEAGLRTLVIAYRELG 662 (928)
Q Consensus 592 ~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~l~~~~~~Glr~l~~A~k~l~ 662 (928)
.+||+|+||||+++++.+++++++|+||||+.|+++|+.. +. +.++.+.+.+++|+.+|+|++++|||.++
T Consensus 475 ~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~ 554 (941)
T TIGR01517 475 IYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFA 554 (941)
T ss_pred ccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecC
Confidence 9999999999999999877889999999999999999752 10 13567788899999999999999999987
Q ss_pred HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHH
Q 002392 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (928)
Q Consensus 663 ~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ 742 (928)
.+++..| +..|+||+|+|+++++|++|++++++|+.|+++||++||+|||+..||.+
T Consensus 555 ~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ 611 (941)
T TIGR01517 555 PEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKA 611 (941)
T ss_pred ccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHH
Confidence 6543222 23478999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH
Q 002392 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (928)
Q Consensus 743 ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~ 822 (928)
+|++|||.+++. .+++|+++..+.++
T Consensus 612 iA~~~GI~~~~~------------------------------------------------------~vi~G~~~~~l~~~ 637 (941)
T TIGR01517 612 IARNCGILTFGG------------------------------------------------------LAMEGKEFRRLVYE 637 (941)
T ss_pred HHHHcCCCCCCc------------------------------------------------------eEeeHHHhhhCCHH
Confidence 999999975432 15666666555444
Q ss_pred HHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhcCcEee
Q 002392 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAI 900 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi 900 (928)
++.+.+. +..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||+ |++. |+++||+++
T Consensus 638 el~~~i~------~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL 709 (941)
T TIGR01517 638 EMDPILP------KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIIL 709 (941)
T ss_pred HHHHHhc------cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEE
Confidence 4444332 23599999999999999999999999999999999999999999999995 5666 999999999
Q ss_pred c--ccccchhhhhhhchhhhhhccccccc
Q 002392 901 A--QFRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 901 ~--~f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+ +|+.|.++ +.|||++|+|+++++.|
T Consensus 710 ~dd~f~~I~~~-i~~gR~~~~ni~k~i~~ 737 (941)
T TIGR01517 710 LDDNFASIVRA-VKWGRNVYDNIRKFLQF 737 (941)
T ss_pred ecCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9 47779999 79999999999999987
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-92 Score=874.45 Aligned_cols=701 Identities=19% Similarity=0.234 Sum_probs=510.4
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHH
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r 128 (928)
++++..||.|.+..++.+++ +.|++||..|++++++++++++++. ++|.+.+.++++++++.+...++.++.
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~----~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD----EYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788899999999887666 8999999999998888887777763 556666777777888888888888888
Q ss_pred hhhhHHHh--cceeEEEccCCeEEEEeccccccCcEEEec--CCcccCceEEEEeeeCCCceEEEEeccCCCCccceeec
Q 002392 129 RKQDIEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVH--KDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (928)
Q Consensus 129 ~~~~~~~n--~~~~~v~r~~g~~~~i~~~~L~vGDII~l~--~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~ 204 (928)
.++.+++. ++.++|+| ||+|++|++++|+|||||.|+ +|+.|||||+||+ |.|.||||+|||||.|+.|.
T Consensus 218 ~~~L~~~~~~~~~v~V~R-dg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVIR-NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHhhcCCeeEEEEE-CCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceecc
Confidence 88877765 56899999 999999999999999999999 9999999999999 77999999999999999998
Q ss_pred cchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce---
Q 002392 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV--- 281 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki--- 281 (928)
+.+.... . ++. +.....++...+|+||.+++.... ..++.+.|+|++||.+|..
T Consensus 292 ~~~~~~~-~-~~~-------~~~~~~~~~~~lf~GT~v~~~~~~--------------~g~g~~~~vV~~TG~~T~~G~i 348 (1054)
T TIGR01657 292 PIPDNGD-D-DED-------LFLYETSKKHVLFGGTKILQIRPY--------------PGDTGCLAIVVRTGFSTSKGQL 348 (1054)
T ss_pred cCCcccc-c-ccc-------ccccccccceEEEcCCEEEEEecC--------------CCCCcEEEEEEeCCccccchHH
Confidence 8643100 0 000 001111233355666666531100 0135699999999999954
Q ss_pred eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHH
Q 002392 282 MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361 (928)
Q Consensus 282 ~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 361 (928)
.+....++.+.+++++.+.+++.+++.+.++.+++.++ .++... . + +...+
T Consensus 349 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~---~-----~--------------------~~~~~ 399 (1054)
T TIGR01657 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDG---R-----P--------------------LGKII 399 (1054)
T ss_pred HHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcC---C-----c--------------------HHHHH
Confidence 44445556667889999888877665444333322221 111110 0 1 23378
Q ss_pred HHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEE
Q 002392 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKC 441 (928)
Q Consensus 362 ~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i 441 (928)
++++.+++.++|++||++++++..++..+| ++++++|+++..+|.||+++++|||||||||+|+|.|.++
T Consensus 400 l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v 469 (1054)
T TIGR01657 400 LRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGV 469 (1054)
T ss_pred HHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeE
Confidence 889999999999999999999999999998 8899999999999999999999999999999999999998
Q ss_pred EEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHH
Q 002392 442 SVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521 (928)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 521 (928)
+..+....... ... .........+..+
T Consensus 470 ~~~~~~~~~~~-----------------------------------------------~~~------~~~~~~~~~~~~~ 496 (1054)
T TIGR01657 470 QGLSGNQEFLK-----------------------------------------------IVT------EDSSLKPSITHKA 496 (1054)
T ss_pred ecccCcccccc-----------------------------------------------ccc------cccccCchHHHHH
Confidence 75432100000 000 0000112256788
Q ss_pred HhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEe-ecCC---e--eEEEecCCCcccccceEEEEeEeecc
Q 002392 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFG-SSQT---S--ISLHELDPVSGQKVNRVYELLHVLEF 595 (928)
Q Consensus 522 l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~-~~~~---~--~~~~~~~~~~~~~~~~~~~il~~~~F 595 (928)
+++||++....+ ...++|.|.|+++++ |+.+.. .... . ..+.... ....+++++.+||
T Consensus 497 ~a~C~~~~~~~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~il~~~pF 560 (1054)
T TIGR01657 497 LATCHSLTKLEG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDD------PPQELSIIRRFQF 560 (1054)
T ss_pred HHhCCeeEEECC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccC------CCceEEEEEEEee
Confidence 999999865321 134799999999975 454432 1100 0 0011000 1257999999999
Q ss_pred cCCcceeEEEEEcCC-CcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHH
Q 002392 596 TSSRKRMSVMVRNPE-NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFL 674 (928)
Q Consensus 596 ~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~ 674 (928)
+|++|||||+++.++ +++++|+|||||.|+++|++. ..++++.+.++.|+.+|+|||++|||.+++.++.++..
T Consensus 561 ~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~--- 635 (1054)
T TIGR01657 561 SSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD--- 635 (1054)
T ss_pred cCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh---
Confidence 999999999999754 568899999999999999864 35678888999999999999999999998543322211
Q ss_pred HHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCc
Q 002392 675 KAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (928)
Q Consensus 675 ~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~ 754 (928)
.+| +.+|+||+|+|+++|+|++|++++++|+.|+++||+++|+|||++.||.++|++|||+.++.
T Consensus 636 -------~~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~ 700 (1054)
T TIGR01657 636 -------LSR--------DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSN 700 (1054)
T ss_pred -------ccH--------HHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc
Confidence 123 56899999999999999999999999999999999999999999999999999999998765
Q ss_pred eEEEEcCCCch-----hhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHH
Q 002392 755 KQIVITLDSPD-----MEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFL 829 (928)
Q Consensus 755 ~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~ 829 (928)
.++..+..... ...+.......... ............ .........+.++++|+.+..+... ..+.+.
T Consensus 701 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~ 773 (1054)
T TIGR01657 701 TLILAEAEPPESGKPNQIKFEVIDSIPFAS----TQVEIPYPLGQD--SVEDLLASRYHLAMSGKAFAVLQAH-SPELLL 773 (1054)
T ss_pred eEEEeecccccCCCCceEEEEecCcccccc----ccccccCccccc--chhhhcccceEEEEEcHHHHHHHHh-hHHHHH
Confidence 55443321100 00000000000000 000000000000 0000112345789999999876432 223444
Q ss_pred HhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccch
Q 002392 830 DLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLE 907 (928)
Q Consensus 830 ~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~ 907 (928)
++...+ .||||++|+||..+|+.+|+.|++|+|+|||+||++||++|||||||+++| |..+|||++.+ |+.+.
T Consensus 774 ~~~~~~--~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~ 848 (1054)
T TIGR01657 774 RLLSHT--TVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVP 848 (1054)
T ss_pred HHHhcC--eEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHH
Confidence 554444 499999999999999999999999999999999999999999999998775 56899999985 77799
Q ss_pred hhhhhhchhhhhhccccccc
Q 002392 908 RLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 908 ~lll~~Gr~~~~~i~~~i~y 927 (928)
++ +.+||.+|.++.+++.|
T Consensus 849 ~~-I~eGR~~l~~~~~~~~~ 867 (1054)
T TIGR01657 849 NV-IREGRCALVTSFQMFKY 867 (1054)
T ss_pred HH-HHHHHHHHHHHHHHHHH
Confidence 99 88999999998877665
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-90 Score=853.78 Aligned_cols=670 Identities=24% Similarity=0.273 Sum_probs=503.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc-CCC-----CCCchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHHh---cceeEEEcc
Q 002392 75 LFEQFRRVANIYFLVVAFVSFSP-LAP-----YSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEAN---NRKVKVYGQ 145 (928)
Q Consensus 75 l~~qf~~~~n~~~l~~~il~~~~-~~~-----~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~n---~~~~~v~r~ 145 (928)
+++||+++++++++++++++++. +.+ .+.|...+.++++++++++...+++++.+++.+.+. +.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViR- 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLR- 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE-
Confidence 46899999999999999999985 221 123445566677788888889999999998866664 67899999
Q ss_pred CCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEE
Q 002392 146 DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 225 (928)
||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.++.....
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~~-------------- 141 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPDE-------------- 141 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCcc--------------
Confidence 9999999999999999999999999999999999554 9999999999999999987532100
Q ss_pred EeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceee---cCCCCCCcccHHHHHHHHH
Q 002392 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ---NATDPPSKRSKIERKMDKI 302 (928)
Q Consensus 226 ~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~~~~~~~~~ 302 (928)
...+.+.+|++++||.+.+ |++.|+|++||.+|++++ +...++.+++|++++++++
T Consensus 142 --------------------~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~ 200 (917)
T TIGR01116 142 --------------------RAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEF 200 (917)
T ss_pred --------------------ccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 0012233455555555553 459999999999997754 5666778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHH
Q 002392 303 VYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEI 382 (928)
Q Consensus 303 ~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~ 382 (928)
+..++.+.++++++.++++..+.... .. ...| ...++..+..++++++.+||++|++++++
T Consensus 201 ~~~l~~~~~~~~~i~~~~~~~~~~~~-~~--~~~~----------------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti 261 (917)
T TIGR01116 201 GELLSKVIGLICILVWVINIGHFNDP-AL--GGGW----------------IQGAIYYFKIAVALAVAAIPEGLPAVITT 261 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc-cc--cchh----------------HHHHHHHHHHHHhhhhhccccccHHHHHH
Confidence 99988877777776655432211000 00 0012 12234456677889999999999999999
Q ss_pred HHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHh
Q 002392 383 VKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKR 462 (928)
Q Consensus 383 ~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~ 462 (928)
+..+++.+| +++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+.... .
T Consensus 262 ~l~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~---------~ 322 (917)
T TIGR01116 262 CLALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN---------E 322 (917)
T ss_pred HHHHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc---------e
Confidence 999999999 788999999999999999999999999999999999999987654321000 0
Q ss_pred hCCcccccCCCCCCCCCCCCcccccCCccCCccccc--hhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceE
Q 002392 463 KGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRD--ERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540 (928)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~ 540 (928)
.. . .+..+.. ..+.+.........+....++.++++||++....++..+.++
T Consensus 323 ~~--~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~ 376 (917)
T TIGR01116 323 FC--V------------------------TGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYE 376 (917)
T ss_pred EE--e------------------------cCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCcee
Confidence 00 0 0000000 000000000011234566789999999998765433222222
Q ss_pred eecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecC
Q 002392 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGA 620 (928)
Q Consensus 541 ~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa 620 (928)
. .++|+|.||++++.+.|+....+....+.....+.. ......|++++.+||+|+||||||+++. ++++++|+|||
T Consensus 377 ~-~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGA 452 (917)
T TIGR01116 377 K-VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGA 452 (917)
T ss_pred e-ccChhHHHHHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCC
Confidence 2 379999999999999998766544333322211100 0113568899999999999999999997 46789999999
Q ss_pred chhhHHHhccc----------chhhHHHHHHHHHHHHh-cCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHH
Q 002392 621 DSVMFERLSKH----------GQQFEAETRRHINRYAE-AGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVA 689 (928)
Q Consensus 621 ~~~i~~~~~~~----------~~~~~~~~~~~l~~~~~-~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~ 689 (928)
|+.|+++|+.. +++.++.+.+++++|+. +|+|||++|||.++.++.. +. . .+.
T Consensus 453 pe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~~----- 516 (917)
T TIGR01116 453 PEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------L-SDP----- 516 (917)
T ss_pred hHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------c-ccc-----
Confidence 99999999741 23456678888999999 9999999999998764321 00 0 010
Q ss_pred HHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHh
Q 002392 690 SAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEAL 769 (928)
Q Consensus 690 ~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~ 769 (928)
...+.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+..||.++|+++|+..++..+.
T Consensus 517 ~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~------------ 584 (917)
T TIGR01116 517 ANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT------------ 584 (917)
T ss_pred hhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc------------
Confidence 12356899999999999999999999999999999999999999999999999999999976442211
Q ss_pred hhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHH
Q 002392 770 EKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 849 (928)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~ 849 (928)
...++|..+..+.++++... .++..||||++|+||.
T Consensus 585 --------------------------------------~~~~~g~~l~~~~~~~~~~~------~~~~~v~ar~~P~~K~ 620 (917)
T TIGR01116 585 --------------------------------------FKSFTGREFDEMGPAKQRAA------CRSAVLFSRVEPSHKS 620 (917)
T ss_pred --------------------------------------ceeeeHHHHhhCCHHHHHHh------hhcCeEEEecCHHHHH
Confidence 12345555444333222221 2345699999999999
Q ss_pred HHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchhhhhhcccccc
Q 002392 850 LVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVK 926 (928)
Q Consensus 850 ~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~ 926 (928)
++|+.++..|++|+|+|||.||++||++|||||||+ |++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.
T Consensus 621 ~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~ 697 (917)
T TIGR01116 621 ELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIR 697 (917)
T ss_pred HHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999889999999999999999999999999994 4455 89999999998 8889999 8999999999999998
Q ss_pred c
Q 002392 927 L 927 (928)
Q Consensus 927 y 927 (928)
|
T Consensus 698 ~ 698 (917)
T TIGR01116 698 Y 698 (917)
T ss_pred H
Confidence 7
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-89 Score=827.65 Aligned_cols=609 Identities=20% Similarity=0.277 Sum_probs=488.0
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
.++|+.+||.|.++.++.+.++ +.|++||.+|++++++++++++++. +.+...+.++++++++.+.+++++++
T Consensus 73 a~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~----~~~~~a~~I~~iv~i~~~i~~~qe~r 145 (902)
T PRK10517 73 VESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT----EDLFAAGVIALMVAISTLLNFIQEAR 145 (902)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH----ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999887554 8999999999999999999999885 56667777888888999999999999
Q ss_pred HhhhhHHH---hcceeEEEccC------CeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCc
Q 002392 128 RRKQDIEA---NNRKVKVYGQD------HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGET 198 (928)
Q Consensus 128 r~~~~~~~---n~~~~~v~r~~------g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs 198 (928)
..++.+.+ .+.+++|+| | |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||
T Consensus 146 a~~~~~~L~~l~~~~a~ViR-~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES 220 (902)
T PRK10517 146 STKAADALKAMVSNTATVLR-VINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGES 220 (902)
T ss_pred HHHHHHHHHhhCCCeEEEEE-CCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCC
Confidence 98775444 578899999 7 789999999999999999999999999999999433 899999999999
Q ss_pred cceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCc
Q 002392 199 NLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHD 278 (928)
Q Consensus 199 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~ 278 (928)
.|+.|.+++.... . .+.-+.+...|+||.+++|. +.++|+.||.+
T Consensus 221 ~PV~K~~~~~~~~---~-----------~~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~~ 265 (902)
T PRK10517 221 LPVEKFATTRQPE---H-----------SNPLECDTLCFMGTNVVSGT---------------------AQAVVIATGAN 265 (902)
T ss_pred Cceeccccccccc---c-----------cCccccccceeeCceEeeee---------------------EEEEEEEeccc
Confidence 9999998653210 0 00011223557777777777 99999999999
Q ss_pred cce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchh
Q 002392 279 TKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPL 355 (928)
Q Consensus 279 Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 355 (928)
|.+ ......+..+++|+++.+++++.++..+.++++.+.++++.+... +|
T Consensus 266 T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~~------------------ 318 (902)
T PRK10517 266 TWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------DW------------------ 318 (902)
T ss_pred cHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------CH------------------
Confidence 965 444455667789999999999998887777777666554432110 12
Q ss_pred HHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccce
Q 002392 356 AAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (928)
Q Consensus 356 ~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 435 (928)
...+..++++++.+||++||++++++...++.+| +++++++|+++.+|+||++++||||||||||+|+
T Consensus 319 --~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~ 386 (902)
T PRK10517 319 --WEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDK 386 (902)
T ss_pred --HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccce
Confidence 2367788999999999999999999999999888 8999999999999999999999999999999999
Q ss_pred eEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHH
Q 002392 436 MEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVI 515 (928)
Q Consensus 436 m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 515 (928)
|++.++... .+. . .
T Consensus 387 m~V~~~~~~---~~~------------------------------------------------------------~---~ 400 (902)
T PRK10517 387 IVLENHTDI---SGK------------------------------------------------------------T---S 400 (902)
T ss_pred EEEEEEecC---CCC------------------------------------------------------------C---H
Confidence 999875310 000 0 0
Q ss_pred HHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecc
Q 002392 516 QKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEF 595 (928)
Q Consensus 516 ~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F 595 (928)
.+++...++|.... . ..+||.|.|++.++...+.. .....|+.+..+||
T Consensus 401 ~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~~~~~~~~~pF 449 (902)
T PRK10517 401 ERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLASRWQKIDEIPF 449 (902)
T ss_pred HHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhhcCceEEEeee
Confidence 13444444443221 0 13699999999998653210 01245777889999
Q ss_pred cCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHH
Q 002392 596 TSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEY 666 (928)
Q Consensus 596 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~ 666 (928)
+|+||||+++++.+++...+++|||++.|+++|+.. +++.++.+.+..+.++.+|+|++++|||.++.++.
T Consensus 450 ds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~ 529 (902)
T PRK10517 450 DFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG 529 (902)
T ss_pred CCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc
Confidence 999999999998877788999999999999999752 22345667777889999999999999998865321
Q ss_pred HHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHH
Q 002392 667 RIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (928)
Q Consensus 667 ~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~ 746 (928)
.+ + ...|+|++|+|+++|+||+|++++++|++|+++||+|+|+|||+..||.++|++
T Consensus 530 -~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~ 586 (902)
T PRK10517 530 -DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE 586 (902)
T ss_pred -cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 00 0 113689999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHH
Q 002392 747 CSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 826 (928)
Q Consensus 747 ~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~ 826 (928)
+||..+. +++|..++.+.++++.+
T Consensus 587 lGI~~~~--------------------------------------------------------v~~G~el~~l~~~el~~ 610 (902)
T PRK10517 587 VGLDAGE--------------------------------------------------------VLIGSDIETLSDDELAN 610 (902)
T ss_pred cCCCccC--------------------------------------------------------ceeHHHHHhCCHHHHHH
Confidence 9994210 44555555444444443
Q ss_pred HHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--c
Q 002392 827 MFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--F 903 (928)
Q Consensus 827 ~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f 903 (928)
...+ ..+|+|++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||+ |++. |+++||+|+++ |
T Consensus 611 ~~~~------~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~~ 682 (902)
T PRK10517 611 LAER------TTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLEKSL 682 (902)
T ss_pred HHhh------CcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecCCh
Confidence 3332 2499999999999999999999999999999999999999999999995 4455 99999999997 5
Q ss_pred ccchhhhhhhchhhhhhccccccc
Q 002392 904 RFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 904 ~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
..+..+ +.+||..|+|+++++.|
T Consensus 683 ~~I~~a-i~~gR~i~~nI~k~i~~ 705 (902)
T PRK10517 683 MVLEEG-VIEGRRTFANMLKYIKM 705 (902)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHH
Confidence 559988 99999999999999876
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-87 Score=823.43 Aligned_cols=635 Identities=21% Similarity=0.252 Sum_probs=496.5
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHH-HHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQF-RRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf-~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~ 126 (928)
.++|+++||.|.+..++.+.++ +.+++|| .+|++++++++++++++. +.|...+.+++++++..+..+++++
T Consensus 30 v~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~----g~~~~~~~i~~~i~~~~~i~~~qe~ 102 (884)
T TIGR01522 30 ASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM----GNIDDAVSITLAILIVVTVGFVQEY 102 (884)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH----cchhhHHHHHhHHHHHHHHHHHHHH
Confidence 4578899999999988755443 8899999 899999999999999875 4455555566666677778899999
Q ss_pred HHhhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceee
Q 002392 127 RRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (928)
Q Consensus 127 ~r~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K 203 (928)
+.+++.+.+. +.+++|+| ||++++|+++||+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|
T Consensus 103 ~a~~~l~~L~~l~~~~~~ViR-dg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K 177 (884)
T TIGR01522 103 RSEKSLEALNKLVPPECHLIR-EGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSK 177 (884)
T ss_pred HHHHHHHHHhccCCCeeEEEE-CCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceec
Confidence 9988876664 77899999 9999999999999999999999999999999999443 89999999999999999
Q ss_pred ccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcccee-
Q 002392 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM- 282 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~- 282 (928)
.+++..... ..+........|+||.+.+|. +.++|++||.+|.++
T Consensus 178 ~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~gk 223 (884)
T TIGR01522 178 VTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFGA 223 (884)
T ss_pred ccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHHH
Confidence 986532100 011123334678888888887 999999999999654
Q ss_pred --ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHH
Q 002392 283 --QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (928)
Q Consensus 283 --~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
.........++|+++.+++++.++.++.++++++.+++..+ .. . +| ...
T Consensus 224 i~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~-~-------~~--------------------~~~ 274 (884)
T TIGR01522 224 VFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QG-K-------DW--------------------LEM 274 (884)
T ss_pred HHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-C-------CH--------------------HHH
Confidence 34455566689999999999998877665554444333211 10 0 12 236
Q ss_pred HHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEE
Q 002392 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
+..++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|++.+
T Consensus 275 ~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~ 344 (884)
T TIGR01522 275 FTISVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTK 344 (884)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEE
Confidence 7778899999999999999999999999988 899999999999999999999999999999999999999
Q ss_pred EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHH
Q 002392 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (928)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (928)
++..+..+..... ...+ ....+..++. ......++.+.+++.
T Consensus 345 i~~~~~~~~~~~~-----------~~~~---------------------~~~~~~~~~~------~~~~~~~~~~~~~l~ 386 (884)
T TIGR01522 345 IWTSDGLHTMLNA-----------VSLN---------------------QFGEVIVDGD------VLHGFYTVAVSRILE 386 (884)
T ss_pred EEecCceEeeccC-----------CccC---------------------CCCccccccc------ccccccCHHHHHHHH
Confidence 9876543210000 0000 0000000000 000112235667888
Q ss_pred HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcc
Q 002392 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (928)
Q Consensus 521 ~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (928)
+.++||++.....+ + ...++|.|.||+++++..|+... ...|+.++.+||+|+||
T Consensus 387 ~~~l~~~~~~~~~~--~---~~~g~p~e~All~~~~~~~~~~~--------------------~~~~~~~~~~pF~s~~k 441 (884)
T TIGR01522 387 AGNLCNNAKFRNEA--D---TLLGNPTDVALIELLMKFGLDDL--------------------RETYIRVAEVPFSSERK 441 (884)
T ss_pred HHhhhCCCeecCCC--C---CcCCChHHHHHHHHHHHcCcHhH--------------------HhhCcEEeEeCCCCCCC
Confidence 99999988654321 1 11368999999999998775311 23577889999999999
Q ss_pred eeEEEEEcC-CCcEEEEEecCchhhHHHhccc----------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHH
Q 002392 601 RMSVMVRNP-ENQLLLLCKGADSVMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669 (928)
Q Consensus 601 rmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~ 669 (928)
||+++++.+ ++++++|+|||||.|+.+|+.. +++.++.+.+.++.++.+|+|++++|||.++
T Consensus 442 ~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~------- 514 (884)
T TIGR01522 442 WMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK------- 514 (884)
T ss_pred eEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC-------
Confidence 999999874 5678999999999999999742 1234566778889999999999999998652
Q ss_pred HHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 670 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 670 ~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
.+|+|+|+++++|++|++++++|+.|+++||+++|+|||+..||.++|+++||
T Consensus 515 ---------------------------~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi 567 (884)
T TIGR01522 515 ---------------------------GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGM 567 (884)
T ss_pred ---------------------------CCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHH
Q 002392 750 LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFL 829 (928)
Q Consensus 750 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~ 829 (928)
...... +++|+.++.+.++++.+.+.
T Consensus 568 ~~~~~~------------------------------------------------------~v~g~~l~~~~~~~l~~~~~ 593 (884)
T TIGR01522 568 PSKTSQ------------------------------------------------------SVSGEKLDAMDDQQLSQIVP 593 (884)
T ss_pred CCCCCc------------------------------------------------------eeEhHHhHhCCHHHHHHHhh
Confidence 754321 34455554443333333322
Q ss_pred HhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec--CCcchhhhhcCcEeecc--ccc
Q 002392 830 DLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--FRF 905 (928)
Q Consensus 830 ~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi~~--f~~ 905 (928)
+..||||++|+||..+|+.+++.|+.|+|+|||.||++||++|||||+|+ |++. |+++||+++++ |..
T Consensus 594 ------~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~dd~~~~ 665 (884)
T TIGR01522 594 ------KVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTDDDFAT 665 (884)
T ss_pred ------cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcCCCHHH
Confidence 33599999999999999999999999999999999999999999999995 3444 88999999986 777
Q ss_pred chhhhhhhchhhhhhccccccc
Q 002392 906 LERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 906 l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+.++ +.+||.+|+|+++++.|
T Consensus 666 i~~~-i~~gR~~~~ni~k~i~~ 686 (884)
T TIGR01522 666 ILSA-IEEGKGIFNNIKNFITF 686 (884)
T ss_pred HHHH-HHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999887
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-87 Score=820.08 Aligned_cols=624 Identities=21% Similarity=0.256 Sum_probs=482.9
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCC-----CCCchhhHHHHHHHHHHHhH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAP-----YSAPSVLAPLIVVIGATMAK 120 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~~-----~~~~~~~~~l~~vl~i~~~~ 120 (928)
.++|+.+||+|.+..++.+.++ +.+++||++|++++++++++++++. +.+ .+.|...+.++++++++.+.
T Consensus 51 a~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i 127 (903)
T PRK15122 51 AAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLL 127 (903)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHH
Confidence 4578999999999988865443 7899999999999999999999875 111 12345666677888888899
Q ss_pred HHHHHHHHhhhhHHH---hcceeEEEccC------CeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEe
Q 002392 121 EGVEDWRRRKQDIEA---NNRKVKVYGQD------HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVET 191 (928)
Q Consensus 121 ~~~~~~~r~~~~~~~---n~~~~~v~r~~------g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~ 191 (928)
+++++++..++.+.+ .+.+++|+| | |+++.|++++|+|||||.|++||.|||||+|+++++ +.|||
T Consensus 128 ~~~qe~~a~~a~~~L~~l~~~~~~V~R-dg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDE 202 (903)
T PRK15122 128 RFWQEFRSNKAAEALKAMVRTTATVLR-RGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQ 202 (903)
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEEE-CCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEc
Confidence 999999998875555 478899999 7 589999999999999999999999999999999443 79999
Q ss_pred ccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEE
Q 002392 192 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGV 271 (928)
Q Consensus 192 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gv 271 (928)
|+|||||.|+.|.+............ ..+. ..+..+.....|+||.+++|. +.++
T Consensus 203 S~LTGES~PV~K~~~~~~~~~~~~~~---~~~~-~~~~~~~~n~vfaGT~V~~G~---------------------~~~~ 257 (903)
T PRK15122 203 AVLTGEALPVEKYDTLGAVAGKSADA---LADD-EGSLLDLPNICFMGTNVVSGT---------------------ATAV 257 (903)
T ss_pred cccCCCCcceeeeccccccccccccc---cccc-cCCcccccceEEeCCEEEeee---------------------EEEE
Confidence 99999999999986211000000000 0000 000011223567888887777 9999
Q ss_pred EEEecCccceeec---CCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCccc
Q 002392 272 VVFTGHDTKVMQN---ATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFY 348 (928)
Q Consensus 272 Vv~tG~~Tki~~~---~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 348 (928)
|++||.+|.+.+. ... +...+++++.++++..++..+.++++.+.+++..+... +|
T Consensus 258 V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~---------~~----------- 316 (903)
T PRK15122 258 VVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKG---------DW----------- 316 (903)
T ss_pred EEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC---------CH-----------
Confidence 9999999975333 333 44568999999999888776666655544433322110 12
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCC
Q 002392 349 DPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 428 (928)
Q Consensus 349 ~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKT 428 (928)
...+..++.+++.+||++||++++++...++.+| +++++++|++..+|+||++++||||||
T Consensus 317 ---------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKT 377 (903)
T PRK15122 317 ---------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKT 377 (903)
T ss_pred ---------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCC
Confidence 2367778999999999999999999999999888 889999999999999999999999999
Q ss_pred CccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCC
Q 002392 429 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVN 508 (928)
Q Consensus 429 GTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 508 (928)
||||+|+|++.+++.....
T Consensus 378 GTLT~~~m~V~~~~~~~~~------------------------------------------------------------- 396 (903)
T PRK15122 378 GTLTQDRIILEHHLDVSGR------------------------------------------------------------- 396 (903)
T ss_pred cccccCeEEEEEEEcCCCC-------------------------------------------------------------
Confidence 9999999999986521100
Q ss_pred CCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEE
Q 002392 509 EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 588 (928)
Q Consensus 509 ~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (928)
.. .+++...++|. ... . ..+||.|.|+++++.+.|.... ...|+
T Consensus 397 --~~---~~~l~~a~l~s-~~~--~--------~~~~p~e~All~~a~~~~~~~~--------------------~~~~~ 440 (903)
T PRK15122 397 --KD---ERVLQLAWLNS-FHQ--S--------GMKNLMDQAVVAFAEGNPEIVK--------------------PAGYR 440 (903)
T ss_pred --Ch---HHHHHHHHHhC-CCC--C--------CCCChHHHHHHHHHHHcCchhh--------------------hhcCc
Confidence 00 02333333331 110 0 1369999999999988664210 13567
Q ss_pred EeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEE
Q 002392 589 LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYR 659 (928)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k 659 (928)
.+..+||++.||+|+++++..+|++++++||||+.|+++|+.. +++.++.+.+.++.++.+|+|++++|||
T Consensus 441 ~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k 520 (903)
T PRK15122 441 KVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATR 520 (903)
T ss_pred eEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEe
Confidence 7888999999999999999877889999999999999999742 2233556777889999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 660 ~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
.++.++...+ ..+..|+|++|+|+++++||+|++++++|+.|+++||+|+|+|||+..|
T Consensus 521 ~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t 579 (903)
T PRK15122 521 EIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIV 579 (903)
T ss_pred ccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 9876432110 0123578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHH
Q 002392 740 AINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA 819 (928)
Q Consensus 740 a~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~ 819 (928)
|.++|+++||.... +++|..++.+
T Consensus 580 A~aIA~~lGI~~~~--------------------------------------------------------vi~G~el~~~ 603 (903)
T PRK15122 580 TAKICREVGLEPGE--------------------------------------------------------PLLGTEIEAM 603 (903)
T ss_pred HHHHHHHcCCCCCC--------------------------------------------------------ccchHhhhhC
Confidence 99999999994210 4556555555
Q ss_pred hHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcE
Q 002392 820 LDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDY 898 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~ 898 (928)
.++++.+...+ ..+|||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||+ |++. |+++||+
T Consensus 604 ~~~el~~~v~~------~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--AkeaADi 675 (903)
T PRK15122 604 DDAALAREVEE------RTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADI--AKESADI 675 (903)
T ss_pred CHHHHHHHhhh------CCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--HHHhcCE
Confidence 44444443332 2499999999999999999999999999999999999999999999995 5666 9999999
Q ss_pred eecc--cccchhhhhhhchhhhhhccccccc
Q 002392 899 AIAQ--FRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 899 vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
|+++ |..+..+ +.+||..|+|+++++.|
T Consensus 676 VLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~ 705 (903)
T PRK15122 676 ILLEKSLMVLEEG-VIKGRETFGNIIKYLNM 705 (903)
T ss_pred EEecCChHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9996 5569999 99999999999998876
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-87 Score=817.04 Aligned_cols=609 Identities=20% Similarity=0.256 Sum_probs=484.2
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
.++|+++||.|.+..++.+.++ +.+++||..|++++++++++++++. +.+...+.++++++++.+...+++++
T Consensus 39 v~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~----~~~~~~~iI~~iv~~~~~i~~~~e~~ 111 (867)
T TIGR01524 39 VTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT----DDLEATVIIALMVLASGLLGFIQESR 111 (867)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH----hhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4678899999999998865443 8999999999999999999999885 56667777788888888999999998
Q ss_pred HhhhhHHH---hcceeEEEcc-----CCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCcc
Q 002392 128 RRKQDIEA---NNRKVKVYGQ-----DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETN 199 (928)
Q Consensus 128 r~~~~~~~---n~~~~~v~r~-----~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~ 199 (928)
.+++...+ .+.+++|+|. ||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+|||||.
T Consensus 112 a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES~ 187 (867)
T TIGR01524 112 AERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGESL 187 (867)
T ss_pred HHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCCC
Confidence 87775444 5788999983 7999999999999999999999999999999999443 7999999999999
Q ss_pred ceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcc
Q 002392 200 LKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT 279 (928)
Q Consensus 200 ~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~T 279 (928)
|+.|.+++.... .. +..+.....|+||.+.+|. +.++|++||.+|
T Consensus 188 PV~K~~~~~~~~---~~-----------~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~~T 232 (867)
T TIGR01524 188 PVEKFVEDKRAR---DP-----------EILERENLCFMGTNVLSGH---------------------AQAVVLATGSST 232 (867)
T ss_pred cccccCCccccc---cc-----------cccccccceecCCeEEEeE---------------------EEEEEEEEcCcc
Confidence 999998653200 00 0011223567888888777 999999999999
Q ss_pred ce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhH
Q 002392 280 KV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLA 356 (928)
Q Consensus 280 ki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 356 (928)
.+ ...... +..++|+++.++++..++..+.++++++.++++.+... +|
T Consensus 233 ~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~~------------------- 283 (867)
T TIGR01524 233 WFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------DW------------------- 283 (867)
T ss_pred HHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------CH-------------------
Confidence 75 333444 45578999999999999888887777666554432110 12
Q ss_pred HHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcccccee
Q 002392 357 AFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSM 436 (928)
Q Consensus 357 ~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m 436 (928)
...+..++.+++.+||++||++++++...++.+| +++++++|+++.+|+||++++||||||||||+|+|
T Consensus 284 -~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m 352 (867)
T TIGR01524 284 -LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKI 352 (867)
T ss_pred -HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeE
Confidence 2367788899999999999999999999999988 89999999999999999999999999999999999
Q ss_pred EEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHH
Q 002392 437 EFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQ 516 (928)
Q Consensus 437 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 516 (928)
++.+++.... . ...
T Consensus 353 ~v~~~~~~~~---~---------------------------------------------------------------~~~ 366 (867)
T TIGR01524 353 ELEKHIDSSG---E---------------------------------------------------------------TSE 366 (867)
T ss_pred EEEEEecCCC---C---------------------------------------------------------------CHH
Confidence 9988641100 0 001
Q ss_pred HHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeeccc
Q 002392 517 KFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFT 596 (928)
Q Consensus 517 ~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~ 596 (928)
+++...++|.... ...+||.|.|+++++....... ....|+.+..+||+
T Consensus 367 ~~l~~a~l~~~~~-----------~~~~~p~~~Al~~~~~~~~~~~--------------------~~~~~~~~~~~pF~ 415 (867)
T TIGR01524 367 RVLKMAWLNSYFQ-----------TGWKNVLDHAVLAKLDESAARQ--------------------TASRWKKVDEIPFD 415 (867)
T ss_pred HHHHHHHHhCCCC-----------CCCCChHHHHHHHHHHhhchhh--------------------HhhcCceEEEeccC
Confidence 3344444443221 0135999999999987532110 12456778889999
Q ss_pred CCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHH
Q 002392 597 SSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (928)
Q Consensus 597 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~ 667 (928)
|+||||+++++++++..++++|||++.|+++|+.. +++.++.+.+.++.++.+|+|++++|||+++.++..
T Consensus 416 s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~ 495 (867)
T TIGR01524 416 FDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD 495 (867)
T ss_pred CCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc
Confidence 99999999999876678899999999999999742 223456777888999999999999999998764310
Q ss_pred HHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 668 ~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
+ .+..|.+|+|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++
T Consensus 496 -~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l 552 (867)
T TIGR01524 496 -F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV 552 (867)
T ss_pred -c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 0 01236899999999999999999999999999999999999999999999999999
Q ss_pred CCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHH
Q 002392 748 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 827 (928)
Q Consensus 748 gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~ 827 (928)
||..+. +++|..++.+.++++.+.
T Consensus 553 GI~~~~--------------------------------------------------------v~~g~~l~~~~~~el~~~ 576 (867)
T TIGR01524 553 GIDAND--------------------------------------------------------FLLGADIEELSDEELARE 576 (867)
T ss_pred CCCCCC--------------------------------------------------------eeecHhhhhCCHHHHHHH
Confidence 995321 334444443333333332
Q ss_pred HHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cc
Q 002392 828 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FR 904 (928)
Q Consensus 828 ~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~ 904 (928)
.. +..+|+|++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||+ |++. |+++||+|+++ |.
T Consensus 577 ~~------~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~ 648 (867)
T TIGR01524 577 LR------KYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLM 648 (867)
T ss_pred hh------hCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChH
Confidence 22 23499999999999999999999999999999999999999999999996 4555 99999999996 55
Q ss_pred cchhhhhhhchhhhhhccccccc
Q 002392 905 FLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 905 ~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
.+..+ +.+||..|+|+++++.|
T Consensus 649 ~I~~a-i~~gR~i~~ni~k~i~~ 670 (867)
T TIGR01524 649 VLEEG-VIEGRNTFGNILKYLKM 670 (867)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHH
Confidence 69998 99999999999999876
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-87 Score=802.29 Aligned_cols=585 Identities=19% Similarity=0.246 Sum_probs=479.7
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~ 127 (928)
.++|+++||.|.++..+.++| +.|++||.+|+++.++++++++++. +.|...+.++++++++.+.+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~----~~~~~~~~i~~~~~i~~~i~~~qe~~ 78 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL----ENWVDFVIILGLLLLNATIGFIEENK 78 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh----cchhhhhhhhhhhHHHHHHHHHHHHH
Confidence 356889999999998666654 7889999999999999999999985 55666667778888888899999999
Q ss_pred HhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCce-EEEEeccCCCCccceee
Q 002392 128 RRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGI-CYVETMNLDGETNLKLK 203 (928)
Q Consensus 128 r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~-~~Vd~s~LtGEs~~~~K 203 (928)
..++.+.+ .+.+++|+| ||++++|++++|+|||||.|++||+|||||+|++ |. +.||||+|||||.|+.|
T Consensus 79 a~~~~~~L~~~~~~~~~V~R-dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~-----g~~~~VDeS~LTGES~PV~K 152 (755)
T TIGR01647 79 AGNAVEALKQSLAPKARVLR-DGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE-----GDYIQVDQAALTGESLPVTK 152 (755)
T ss_pred HHHHHHHHHhhCCCeEEEEE-CCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe-----cCceEEEcccccCCccceEe
Confidence 98876555 478999999 9999999999999999999999999999999999 54 89999999999999999
Q ss_pred ccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcccee-
Q 002392 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM- 282 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~- 282 (928)
.+++. .|+||.+.+|. +.++|+.||.+|.+.
T Consensus 153 ~~~~~---------------------------v~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~ 184 (755)
T TIGR01647 153 KTGDI---------------------------AYSGSTVKQGE---------------------AEAVVTATGMNTFFGK 184 (755)
T ss_pred ccCCe---------------------------eeccCEEEccE---------------------EEEEEEEcCCccHHHH
Confidence 87653 39999999998 999999999999753
Q ss_pred --ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHH
Q 002392 283 --QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (928)
Q Consensus 283 --~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
.....++..++++|+.+++++.+++++.++++++.++++.++... +| ...
T Consensus 185 i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~--------~~--------------------~~~ 236 (755)
T TIGR01647 185 AAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE--------SF--------------------REG 236 (755)
T ss_pred HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------CH--------------------HHH
Confidence 345556667799999999999999888888777766655431110 12 236
Q ss_pred HHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEE
Q 002392 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
+..++.+++.+|||+|+++++++...++.++ +++++++|+++.+|.||.+++||||||||||+|+|++.+
T Consensus 237 ~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~ 306 (755)
T TIGR01647 237 LQFALVLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDE 306 (755)
T ss_pred HHHHHHHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEE
Confidence 7788999999999999999999999999988 899999999999999999999999999999999999999
Q ss_pred EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHH
Q 002392 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (928)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (928)
++..+..+. ..+++.
T Consensus 307 ~~~~~~~~~-----------------------------------------------------------------~~~~l~ 321 (755)
T TIGR01647 307 ILPFFNGFD-----------------------------------------------------------------KDDVLL 321 (755)
T ss_pred EEecCCCCC-----------------------------------------------------------------HHHHHH
Confidence 875421010 013455
Q ss_pred HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcc
Q 002392 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (928)
Q Consensus 521 ~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (928)
..++|+.. .++||.|.|+++++++.+. ....|+++..+||++.+|
T Consensus 322 ~a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~~pf~~~~k 366 (755)
T TIGR01647 322 YAALASRE-------------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEFVPFDPVDK 366 (755)
T ss_pred HHHHhCCC-------------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEEeccCCCCC
Confidence 55556421 1369999999998876431 023567788999999999
Q ss_pred eeEEEEEcCC-CcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhh
Q 002392 601 RMSVMVRNPE-NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTS 679 (928)
Q Consensus 601 rmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~ 679 (928)
+|+++++.++ |+.++++|||++.|+++|+.. .+.++.+.+.+++++.+|+|++++|+|..
T Consensus 367 ~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~~~~~G~rvl~vA~~~~------------------ 427 (755)
T TIGR01647 367 RTEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDELASRGYRALGVARTDE------------------ 427 (755)
T ss_pred eEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHHHHhCCCEEEEEEEEcC------------------
Confidence 9999998764 778899999999999999753 24566778888999999999999999721
Q ss_pred ccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEE
Q 002392 680 VTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVI 759 (928)
Q Consensus 680 ~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i 759 (928)
|.+|+|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||..+. .
T Consensus 428 ----------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~ 486 (755)
T TIGR01647 428 ----------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----Y 486 (755)
T ss_pred ----------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----c
Confidence 3689999999999999999999999999999999999999999999999999996421 0
Q ss_pred cCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE
Q 002392 760 TLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839 (928)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i 839 (928)
.++ . +.+|..++.+.++++.+.+.+ + .+
T Consensus 487 ~~~-----~-----------------------------------------l~~~~~~~~~~~~~~~~~~~~----~--~v 514 (755)
T TIGR01647 487 TAD-----V-----------------------------------------LLKGDNRDDLPSGELGEMVED----A--DG 514 (755)
T ss_pred CHH-----H-----------------------------------------hcCCcchhhCCHHHHHHHHHh----C--CE
Confidence 000 0 011111111111222222222 2 39
Q ss_pred EEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchh
Q 002392 840 CCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHW 916 (928)
Q Consensus 840 ~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~ 916 (928)
|+|++|+||..+|+.+|+.|++|+|+|||.||+|+|++|||||||+ |++. |+++||+++++ |..+..+ +.+||.
T Consensus 515 fAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~a-i~~gR~ 591 (755)
T TIGR01647 515 FAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDA-ILESRK 591 (755)
T ss_pred EEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHH-HHHHHH
Confidence 9999999999999999999999999999999999999999999995 4455 99999999997 5559998 999999
Q ss_pred hhhhccccccc
Q 002392 917 CYRRISMMVKL 927 (928)
Q Consensus 917 ~~~~i~~~i~y 927 (928)
.|+|+++++.|
T Consensus 592 ~~~ni~k~i~~ 602 (755)
T TIGR01647 592 IFQRMKSYVIY 602 (755)
T ss_pred HHHHHHHHHHH
Confidence 99999999876
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-84 Score=727.71 Aligned_cols=724 Identities=19% Similarity=0.270 Sum_probs=523.9
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHH
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r 128 (928)
..|+.-||.|.|..+..+.+ .+|+++..+|++++..+..++|... +++.++..++++...+++...||..+.
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~d----~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLAD----SYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhcc----cchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 35677899999999999888 7899999999988888877777764 677788888888889999999998888
Q ss_pred hhhhHHHh--cceeEEEccCCeEEEEeccccccCcEEEecC-CcccCceEEEEeeeCCCceEEEEeccCCCCccceeecc
Q 002392 129 RKQDIEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVHK-DEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRS 205 (928)
Q Consensus 129 ~~~~~~~n--~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~-ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~ 205 (928)
.+..+.+- ...|+|+| +|.|+.|.++||+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|
T Consensus 239 s~rlr~mv~~~~~V~V~R-~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVIR-DGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHhcCCceEEEEE-CCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccC
Confidence 88888886 45799999 9999999999999999999999 899999999999 889999999999999999999
Q ss_pred chhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccc---ee
Q 002392 206 LEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTK---VM 282 (928)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tk---i~ 282 (928)
.+.-.+ .+...+.+..-+..+..|.||.+++-+.. -.+-+.++|++||..|. +.
T Consensus 313 l~~~~~--------~~~~~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KGqLV 369 (1140)
T KOG0208|consen 313 LPMGTD--------SLDSITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKGQLV 369 (1140)
T ss_pred Cccccc--------cCcCeeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEeccccccccHHH
Confidence 862111 01111223334556678999998864310 12349999999999994 45
Q ss_pred ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHH
Q 002392 283 QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFL 362 (928)
Q Consensus 283 ~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (928)
++...++.....+.+..-+++..+. +++++.+++..+.....+ ..+-..++
T Consensus 370 RsilyPkP~~fkfyrds~~fi~~l~----~ia~~gfiy~~i~l~~~g-------------------------~~~~~iii 420 (1140)
T KOG0208|consen 370 RSILYPKPVNFKFYRDSFKFILFLV----IIALIGFIYTAIVLNLLG-------------------------VPLKTIII 420 (1140)
T ss_pred HhhcCCCCcccHHHHHHHHHHHHHH----HHHHHHHHHHhHhHHHcC-------------------------CCHHHHhh
Confidence 5555555444555555544443333 333333333332221110 01223688
Q ss_pred HHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEE
Q 002392 363 TGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCS 442 (928)
Q Consensus 363 ~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~ 442 (928)
+++.++...+|++||.++++.....-.++ ++++|.|-+++.+...|+++.+|||||||||++.+.+-.+.
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 99999999999999999999998888888 89999999999999999999999999999999999998876
Q ss_pred EcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHH
Q 002392 443 VAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVL 522 (928)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 522 (928)
.-...-... ++. ....+.. . ..+ .++. . +........+..++
T Consensus 491 ~~~~~~~~~-~~~--~~~~~~~----------------------~------~~~--~~l~----~-~~~~~~~~~~~~a~ 532 (1140)
T KOG0208|consen 491 PVERNVDDG-PEL--KVVTEDS----------------------L------QLF--YKLS----L-RSSSLPMGNLVAAM 532 (1140)
T ss_pred ecccccccc-chh--hhhhhhh----------------------c------cce--eecc----c-cccCCchHHHHHHH
Confidence 532211000 000 0000000 0 000 0000 0 00111234788999
Q ss_pred hhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeec--------CCee---EEEecC---CCcccccceEEE
Q 002392 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSS--------QTSI---SLHELD---PVSGQKVNRVYE 588 (928)
Q Consensus 523 ~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~--------~~~~---~~~~~~---~~~~~~~~~~~~ 588 (928)
|.||++...... ..++|.|.-+.+ ..|+.+.+.+ .+++ .++... +.+.+...+.+-
T Consensus 533 atCHSL~~v~g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~s 602 (1140)
T KOG0208|consen 533 ATCHSLTLVDGT-------LVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEIS 602 (1140)
T ss_pred hhhceeEEeCCe-------eccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceE
Confidence 999988764432 135787776665 3556664421 0111 111111 111122234799
Q ss_pred EeEeecccCCcceeEEEEEcC-CCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHH
Q 002392 589 LLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (928)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~ 667 (928)
+++.+||+|..+||||||..+ +.+.++|+|||||.|.+.|+++ .++.++.+.++.|+.+|+|++++|+|.++..
T Consensus 603 i~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~--- 677 (1140)
T KOG0208|consen 603 IVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--TVPADYQEVLKEYTHQGFRVIALASKELETS--- 677 (1140)
T ss_pred EEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc---
Confidence 999999999999999999986 4678999999999999999976 6788999999999999999999999999876
Q ss_pred HHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 668 ~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
.|.+..+ . .++.+|+||+|+|++.+|++||+.++.+|++|.+|+|+++|+|||+..||+.+|++|
T Consensus 678 ~~~~~~~-------~--------~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeC 742 (1140)
T KOG0208|consen 678 TLQKAQK-------L--------SRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKEC 742 (1140)
T ss_pred hHHHHhh-------c--------cHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcc
Confidence 3433221 2 337889999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCceEEEEcCCCchhhH-----hhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH
Q 002392 748 SLLRQEMKQIVITLDSPDMEA-----LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (928)
Q Consensus 748 gi~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~ 822 (928)
|++.+...++...-...+... +...+...... ......... ..............+.+.++|+.++.+. .
T Consensus 743 gmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~--~~~~~~~~~--~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~ 817 (1140)
T KOG0208|consen 743 GMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFL--DPKEPDPDL--ASVKLSLDVLSEKDYHLAMSGKTFQVIL-E 817 (1140)
T ss_pred cccCCCCeEEEEeccCCccCCCceeEEEEccCccccC--CCCccCccc--cCCccChhhhccceeEEEecCchhHHHH-h
Confidence 999998877766444211110 00000000000 000000000 0000000111345689999999999988 5
Q ss_pred HHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeec-
Q 002392 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA- 901 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~- 901 (928)
+..+.+.++...+. |||||+|.||.++|+.+|+.|+.|+|||||+||++||++|||||+++.+| |.-||.|.-.
T Consensus 818 ~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~ 892 (1140)
T KOG0208|consen 818 HFPELVPKILLKGT--VFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKT 892 (1140)
T ss_pred hcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCC
Confidence 66667777777666 99999999999999999999999999999999999999999999998887 7889999887
Q ss_pred -ccccchhhhhhhchhh----hhhccccccc
Q 002392 902 -QFRFLERLLLVHGHWC----YRRISMMVKL 927 (928)
Q Consensus 902 -~f~~l~~lll~~Gr~~----~~~i~~~i~y 927 (928)
+-+.+..+ +.+||.. |...+.+.+|
T Consensus 893 ~~I~cVp~v-IrEGRaALVTSf~~FkYMalY 922 (1140)
T KOG0208|consen 893 PSISCVPDV-IREGRAALVTSFACFKYMALY 922 (1140)
T ss_pred CchhhHhHH-HhhhhhhhhhhHHHHHHHHHH
Confidence 66778888 9999975 4444444444
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-78 Score=673.01 Aligned_cols=677 Identities=20% Similarity=0.239 Sum_probs=525.3
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--C--CC-----CCCchhhHHHHHHHHHHHh
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--L--AP-----YSAPSVLAPLIVVIGATMA 119 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~--~~-----~~~~~~~~~l~~vl~i~~~ 119 (928)
.+++.+-|+|..+.+|.+.-+ ..+..|+...+.+.+++.++++++. + +. -......+.|+.+++++.+
T Consensus 65 ~~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 65 AEKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGL 141 (1019)
T ss_pred HhhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEec
Confidence 366889999999999987643 5677899999999999999999875 1 11 1122333445666666777
Q ss_pred HHHHHHHHHhhh---hHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCC
Q 002392 120 KEGVEDWRRRKQ---DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDG 196 (928)
Q Consensus 120 ~~~~~~~~r~~~---~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtG 196 (928)
...+++.+..+- .+.+-++.++|+| ||....+..++|+|||+|.++-|++||||++++++.+ |+||+|+|||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~ViR-dg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTG 216 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVIR-DGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTG 216 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheeee-cceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccc
Confidence 677666555443 3444589999999 9999999999999999999999999999999999887 9999999999
Q ss_pred CccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEec
Q 002392 197 ETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276 (928)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG 276 (928)
||.|..+.|.....+.. |. ....|.+|..++|. ++|+|++||
T Consensus 217 esEP~~~~~~~t~~~~~--------------Et---~Ni~f~st~~veG~---------------------~~givi~tG 258 (1019)
T KOG0203|consen 217 ESEPQTRSPEFTHENPL--------------ET---RNIAFFSTNCVEGT---------------------GRGIVIATG 258 (1019)
T ss_pred ccCCccCCccccccCch--------------hh---eeeeeeeeEEecce---------------------EEEEEEecC
Confidence 99999998754321111 11 11448899999998 999999999
Q ss_pred CccceeecC---CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCc
Q 002392 277 HDTKVMQNA---TDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (928)
Q Consensus 277 ~~Tki~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 353 (928)
.+|.+++.. ......++|+++.+++++.++..+.+++.+..+++..+..+ .|
T Consensus 259 d~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy---------~~---------------- 313 (1019)
T KOG0203|consen 259 DRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY---------EW---------------- 313 (1019)
T ss_pred CceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc---------hh----------------
Confidence 999875554 34567789999999999999988887777766655544321 22
Q ss_pred hhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcccc
Q 002392 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (928)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (928)
+..+...+.+++..+|.+|+++++....+-+.+| +++++++|++.+.|.||..++||+|||||||+
T Consensus 314 ----l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTq 379 (1019)
T KOG0203|consen 314 ----LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 379 (1019)
T ss_pred ----HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEe
Confidence 3345558889999999999999999999999998 99999999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchh
Q 002392 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (928)
Q Consensus 434 n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (928)
|.|+|.++|.++........+.. ++ ......+.
T Consensus 380 nrMtVahlw~d~~i~~~d~~~~~-----------------------------------~~------------~~~~~~~~ 412 (1019)
T KOG0203|consen 380 NRMTVAHLWFDNQIHEADTTEDQ-----------------------------------SG------------QSFDKSSA 412 (1019)
T ss_pred cceEEEeeccCCceeeeechhhh-----------------------------------hc------------ccccccCc
Confidence 99999999988765432211100 00 00011244
Q ss_pred HHHHHHHHHhhhcccccCCCCCCC--ceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeE
Q 002392 514 VIQKFFRVLAICHTAIPDVNEETG--EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591 (928)
Q Consensus 514 ~~~~~~~~l~lc~~~~~~~~~~~~--~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 591 (928)
....+.++..+||.+.....+..- .-.-..+++.|.||++++.-.-... ...++.++.+.
T Consensus 413 ~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~~R~~~~kv~ 474 (1019)
T KOG0203|consen 413 TFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------MELRERNPKVA 474 (1019)
T ss_pred hHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HHHHHhhHHhh
Confidence 566899999999999776433211 1223458999999999987532211 12356788899
Q ss_pred eecccCCcceeEEEEEcCC---CcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEE
Q 002392 592 VLEFTSSRKRMSVMVRNPE---NQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYR 659 (928)
Q Consensus 592 ~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k 659 (928)
.+||+|.+|++-.+.+..+ .+..+.+|||||.++++|+.. ++...+.+.+....+...|-||+.||++
T Consensus 475 eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~ 554 (1019)
T KOG0203|consen 475 EIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDL 554 (1019)
T ss_pred cCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHH
Confidence 9999999999999998754 578899999999999999863 4456777888888999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 660 ~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
.++++++.+...-.- .. .+.--.++.|+|++++-||+|..+|+|+.+||.|||||+|+|||++.|
T Consensus 555 ~l~~~~~p~~~~f~~---d~------------~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiT 619 (1019)
T KOG0203|consen 555 ELPDEKFPRGFQFDT---DD------------VNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 619 (1019)
T ss_pred hcchhcCCCceEeec---CC------------CCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccch
Confidence 999887654321100 00 011225899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHH
Q 002392 740 AINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA 819 (928)
Q Consensus 740 a~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~ 819 (928)
|.++|++.||+..+..... .+..++....... +.....+.|++|.+|..+
T Consensus 620 AkAiA~~vgIi~~~~et~e--------------------------~~a~r~~~~v~~v----n~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 620 AKAIAKSVGIISEGSETVE--------------------------DIAKRLNIPVEQV----NSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred hhhhhhheeeecCCchhhh--------------------------hhHHhcCCccccc----CccccceEEEeccccccc
Confidence 9999999999865432110 0111111111111 123356889999999877
Q ss_pred hHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEe--cCCcchhhhhcCc
Q 002392 820 LDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSD 897 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam--~g~e~~~ak~aAD 897 (928)
-.+++. ++..+....||||.+|+||..||+..|+.|.+|..+|||.||.|||+.||||||| +|++. +|.|||
T Consensus 670 ~~~qld----~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAAD 743 (1019)
T KOG0203|consen 670 SSEQLD----ELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAAD 743 (1019)
T ss_pred CHHHHH----HHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcc
Confidence 655444 4445566789999999999999999999999999999999999999999999998 67888 899999
Q ss_pred Eeeccccc--chhhhhhhchhhhhhccccccc
Q 002392 898 YAIAQFRF--LERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 898 ~vi~~f~~--l~~lll~~Gr~~~~~i~~~i~y 927 (928)
.|++|++| ++.- +.+||.+|.|++|.|.|
T Consensus 744 mILLDDNFASIVtG-VEEGRLiFDNLKKsIAY 774 (1019)
T KOG0203|consen 744 MILLDDNFASIVTG-VEEGRLIFDNLKKSIAY 774 (1019)
T ss_pred eEEecCcchhheee-cccceehhhhHHHHHHH
Confidence 99998555 7777 89999999999999988
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=671.64 Aligned_cols=516 Identities=21% Similarity=0.213 Sum_probs=413.5
Q ss_pred HHHHHHHHHHHHHHHHHhccc-CCC------CCCchhh---HHHHHHHHHHHhHHHHHHHHHhhhhHHHh---cc-eeEE
Q 002392 77 EQFRRVANIYFLVVAFVSFSP-LAP------YSAPSVL---APLIVVIGATMAKEGVEDWRRRKQDIEAN---NR-KVKV 142 (928)
Q Consensus 77 ~qf~~~~n~~~l~~~il~~~~-~~~------~~~~~~~---~~l~~vl~i~~~~~~~~~~~r~~~~~~~n---~~-~~~v 142 (928)
.||++|..+.+++.++++++. +.+ ..+...+ +.+++.++++.+.+.+.++|.+++.+.+. +. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 488999999999999999875 211 1111222 33344455556667778877777655554 43 6999
Q ss_pred EccCCe-EEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccc
Q 002392 143 YGQDHT-FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKF 221 (928)
Q Consensus 143 ~r~~g~-~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~ 221 (928)
+| +|+ +++|++++|++||+|.|++||.|||||+|++ |.+.||||.|||||.|+.|.+++..
T Consensus 109 ir-~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~------------ 170 (679)
T PRK01122 109 LR-EPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF------------ 170 (679)
T ss_pred EE-CCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc------------
Confidence 99 877 9999999999999999999999999999999 7789999999999999999986431
Q ss_pred eEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce---eecCCCCCCcccHHHHH
Q 002392 222 TAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERK 298 (928)
Q Consensus 222 ~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~~ 298 (928)
...|+||.+++|. +.++|+.+|.+|.+ ......++.+++|+|+.
T Consensus 171 ------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~a 217 (679)
T PRK01122 171 ------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEIA 217 (679)
T ss_pred ------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHHH
Confidence 1359999999988 99999999999965 44556677778999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeeh
Q 002392 299 MDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYI 378 (928)
Q Consensus 299 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v 378 (928)
++.+...++.+.++++++.+.+. ||... -..+...+.+++.+|||+|+.
T Consensus 218 l~~l~~~l~~i~l~~~~~~~~~~---------------~~~g~----------------~~~l~~~iallV~aiP~alg~ 266 (679)
T PRK01122 218 LTILLAGLTIIFLLVVATLPPFA---------------AYSGG----------------ALSITVLVALLVCLIPTTIGG 266 (679)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH---------------HHhCc----------------hHHHHHHHHHHHHcccchhhh
Confidence 88877666544443333222211 11100 015667788899999999999
Q ss_pred hHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHH
Q 002392 379 SIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERT 458 (928)
Q Consensus 379 ~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~ 458 (928)
.++++...++.++ .++++++|+...+|.||++++||||||||||+|+|.+..++..+..
T Consensus 267 l~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~----------- 325 (679)
T PRK01122 267 LLSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV----------- 325 (679)
T ss_pred HHHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-----------
Confidence 9998888888888 8999999999999999999999999999999999999887532110
Q ss_pred HHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCc
Q 002392 459 LAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGE 538 (928)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~ 538 (928)
..++++.+.++|+..
T Consensus 326 -------------------------------------------------------~~~~ll~~a~~~s~~---------- 340 (679)
T PRK01122 326 -------------------------------------------------------TEEELADAAQLSSLA---------- 340 (679)
T ss_pred -------------------------------------------------------CHHHHHHHHHHhcCC----------
Confidence 012456666666443
Q ss_pred eEeecCCccHHHHHHHHHH-cCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEE
Q 002392 539 ISYEAESPDEAAFVIAARE-VGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLC 617 (928)
Q Consensus 539 ~~~~~~sp~e~al~~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 617 (928)
..||...|+++++++ .++... ...++....+||++.+++|++.+. | ..|+
T Consensus 341 ----s~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~ 391 (679)
T PRK01122 341 ----DETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIR 391 (679)
T ss_pred ----CCCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC---C--EEEE
Confidence 248999999999986 343210 112455678899999988888653 3 5789
Q ss_pred ecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhc
Q 002392 618 KGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIER 697 (928)
Q Consensus 618 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~ 697 (928)
||+++.|++.|...+...++++.+..++++++|+|++++| .
T Consensus 392 kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va---------------------------------------~ 432 (679)
T PRK01122 392 KGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA---------------------------------------E 432 (679)
T ss_pred ECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE---------------------------------------E
Confidence 9999999999976544556777888899999999999999 3
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
|++++|+++++|++|++++++|++||++||+++|+|||++.||.++|+++||.
T Consensus 433 ~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--------------------------- 485 (679)
T PRK01122 433 DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--------------------------- 485 (679)
T ss_pred CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------------
Confidence 67899999999999999999999999999999999999999999999999993
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~ 857 (928)
.+++|++|++|..+|+.+|+
T Consensus 486 ------------------------------------------------------------~v~A~~~PedK~~iV~~lQ~ 505 (679)
T PRK01122 486 ------------------------------------------------------------DFLAEATPEDKLALIRQEQA 505 (679)
T ss_pred ------------------------------------------------------------EEEccCCHHHHHHHHHHHHH
Confidence 17899999999999999999
Q ss_pred CCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchhhh
Q 002392 858 TGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCY 918 (928)
Q Consensus 858 ~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~ 918 (928)
.|+.|+|+|||.||.|+|++|||||||+ |++. |+++||+|+++ |..|..+ +.+||...
T Consensus 506 ~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~ 566 (679)
T PRK01122 506 EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLL 566 (679)
T ss_pred cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHH
Confidence 9999999999999999999999999994 5555 99999999996 5558888 89999865
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-74 Score=672.59 Aligned_cols=523 Identities=18% Similarity=0.207 Sum_probs=404.3
Q ss_pred HHHHHHHHHHHHHHHHHhccc--CCC----CCC-chhhHHHHHHHH----HHHhHHHHHHHHHhhhhHHHh---cc-eeE
Q 002392 77 EQFRRVANIYFLVVAFVSFSP--LAP----YSA-PSVLAPLIVVIG----ATMAKEGVEDWRRRKQDIEAN---NR-KVK 141 (928)
Q Consensus 77 ~qf~~~~n~~~l~~~il~~~~--~~~----~~~-~~~~~~l~~vl~----i~~~~~~~~~~~r~~~~~~~n---~~-~~~ 141 (928)
.+|++|..+.++++++++++. +.. .+| ..+.+.++++++ ++.+.|.+.++|.+++.+.+. +. +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 367889999999999998865 211 011 112222233333 333344444666666655444 43 576
Q ss_pred -EEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhcc
Q 002392 142 -VYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQK 220 (928)
Q Consensus 142 -v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (928)
|.| ||++++|++++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.++.+.
T Consensus 108 ~v~r-dg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~----------- 170 (673)
T PRK14010 108 RIKQ-DGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDF----------- 170 (673)
T ss_pred EEEe-CCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCcc-----------
Confidence 567 9999999999999999999999999999999999 7789999999999999999986211
Q ss_pred ceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce---eecCCCCCCcccHHHH
Q 002392 221 FTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIER 297 (928)
Q Consensus 221 ~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~ 297 (928)
...|+||.+.+|. +.++|+.||.+|.+ ......++.+++|+|.
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 171 -------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred -------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 0259999999998 99999999999964 4556677778899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceee
Q 002392 298 KMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLY 377 (928)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~ 377 (928)
.+..+...++++.+ +++.++.. ++. |. .+...+...+.+++.+||++|+
T Consensus 217 ~l~~l~~~l~ii~l--~~~~~~~~-~~~------------~~----------------~~~~~~~~~val~V~~IP~aL~ 265 (673)
T PRK14010 217 ALFTLLMTLTIIFL--VVILTMYP-LAK------------FL----------------NFNLSIAMLIALAVCLIPTTIG 265 (673)
T ss_pred HHHHHHHHHhHHHH--HHHHHHHH-HHh------------hc----------------cHHHHHHHHHHHHHHhhhhhHH
Confidence 77665444332211 11111110 000 00 0112445566666778999999
Q ss_pred hhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHH
Q 002392 378 ISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER 457 (928)
Q Consensus 378 v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~ 457 (928)
..++++...++.++ +++++++|++..+|.||.++++|||||||||+|++.+..+.....
T Consensus 266 ~~~~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~----------- 324 (673)
T PRK14010 266 GLLSAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS----------- 324 (673)
T ss_pred HHHHHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-----------
Confidence 99999999999888 999999999999999999999999999999998877765431100
Q ss_pred HHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCC
Q 002392 458 TLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537 (928)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~ 537 (928)
....+++...++|+..
T Consensus 325 -------------------------------------------------------~~~~~ll~~a~~~~~~--------- 340 (673)
T PRK14010 325 -------------------------------------------------------SSFERLVKAAYESSIA--------- 340 (673)
T ss_pred -------------------------------------------------------ccHHHHHHHHHHhcCC---------
Confidence 0112455666677532
Q ss_pred ceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEE
Q 002392 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLC 617 (928)
Q Consensus 538 ~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 617 (928)
+.||.+.|+++++++.|+.... .....+||++++|+|++.++ ++ .+.
T Consensus 341 -----s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~ 387 (673)
T PRK14010 341 -----DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVY 387 (673)
T ss_pred -----CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC---CE--EEE
Confidence 2499999999999987653210 01123799999999999753 33 455
Q ss_pred ecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhc
Q 002392 618 KGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIER 697 (928)
Q Consensus 618 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~ 697 (928)
|||++.++++|...+...+..+.+..++++++|+|+++++ .
T Consensus 388 kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------------------------------~ 428 (673)
T PRK14010 388 KGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------------------------------E 428 (673)
T ss_pred ECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE---------------------------------------E
Confidence 9999999999986433344456677788999999999987 4
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
|++++|+++++|++|++++++|++||++||+++|+|||+..||.++|+++||.
T Consensus 429 ~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--------------------------- 481 (673)
T PRK14010 429 DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--------------------------- 481 (673)
T ss_pred CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------------
Confidence 78999999999999999999999999999999999999999999999999993
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~ 857 (928)
.+++|++|+||.++|+.+|+
T Consensus 482 ------------------------------------------------------------~v~A~~~PedK~~iV~~lQ~ 501 (673)
T PRK14010 482 ------------------------------------------------------------RFVAECKPEDKINVIREEQA 501 (673)
T ss_pred ------------------------------------------------------------eEEcCCCHHHHHHHHHHHHh
Confidence 17899999999999999999
Q ss_pred CCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 858 TGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 858 ~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
.|+.|+|+|||.||.|+|++|||||||+ |++. |+++||+|+++ |..|..+ +.+||..|.++++++.|+
T Consensus 502 ~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~ 572 (673)
T PRK14010 502 KGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFS 572 (673)
T ss_pred CCCEEEEECCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999994 5555 99999999996 5559998 999999999999999885
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-71 Score=643.66 Aligned_cols=528 Identities=19% Similarity=0.232 Sum_probs=415.2
Q ss_pred HHHHHHHHHHHHHHHHHhccc-CCC-------C--CCchhh--HHHHHHHHHHHhHHHHHHHHHhhhhHHHh---cc-ee
Q 002392 77 EQFRRVANIYFLVVAFVSFSP-LAP-------Y--SAPSVL--APLIVVIGATMAKEGVEDWRRRKQDIEAN---NR-KV 140 (928)
Q Consensus 77 ~qf~~~~n~~~l~~~il~~~~-~~~-------~--~~~~~~--~~l~~vl~i~~~~~~~~~~~r~~~~~~~n---~~-~~ 140 (928)
.||++|..+.+++.++++++. +.+ . .|+... +.+++.+++..+.+.+.++|.+++.+.+. +. .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 488999999999999998874 211 1 233222 22333455666667888888888766665 33 47
Q ss_pred EEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhcc
Q 002392 141 KVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQK 220 (928)
Q Consensus 141 ~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (928)
+|+|+||++++|++++|+|||+|.|++||.|||||+|++ |.+.||||.|||||.|+.|.+++..
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~----------- 171 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDF----------- 171 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCc-----------
Confidence 887548999999999999999999999999999999999 7799999999999999999986532
Q ss_pred ceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce---eecCCCCCCcccHHHH
Q 002392 221 FTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIER 297 (928)
Q Consensus 221 ~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~ 297 (928)
...|+||.+.+|. +.++|+.+|.+|.+ ....+.++.+++|+|.
T Consensus 172 -------------~~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~ 217 (675)
T TIGR01497 172 -------------ASVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNEI 217 (675)
T ss_pred -------------ceeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHHH
Confidence 0258999999888 99999999999954 4555667777899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceee
Q 002392 298 KMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLY 377 (928)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~ 377 (928)
.++.+..++.++.++++++ ++.+.. | .. ....+...+.+++.+||++|+
T Consensus 218 ~l~~l~~~l~~v~li~~~~---~~~~~~-----------~-~~----------------~~~~~~~lvallV~aiP~aLg 266 (675)
T TIGR01497 218 ALTILLIALTLVFLLVTAT---LWPFAA-----------Y-GG----------------NAISVTVLVALLVCLIPTTIG 266 (675)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHH-----------h-cC----------------hhHHHHHHHHHHHHhCchhhh
Confidence 8888776654433332221 221110 0 00 001345557889999999887
Q ss_pred hhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHH
Q 002392 378 ISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER 457 (928)
Q Consensus 378 v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~ 457 (928)
...+.+...++.++ .++++++|+...+|.||++++||||||||||+|+|++..++..+..
T Consensus 267 ~l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------- 326 (675)
T TIGR01497 267 GLLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---------- 326 (675)
T ss_pred hHHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC----------
Confidence 77777767778877 8999999999999999999999999999999999999987632100
Q ss_pred HHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCC
Q 002392 458 TLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537 (928)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~ 537 (928)
..++++...++|+..
T Consensus 327 --------------------------------------------------------~~~~ll~~aa~~~~~--------- 341 (675)
T TIGR01497 327 --------------------------------------------------------DEKTLADAAQLASLA--------- 341 (675)
T ss_pred --------------------------------------------------------cHHHHHHHHHHhcCC---------
Confidence 012456666666433
Q ss_pred ceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEE
Q 002392 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLC 617 (928)
Q Consensus 538 ~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 617 (928)
+.||.+.|++++|++.|..... ..++.....||++.+++|++.+. +| ..+.
T Consensus 342 -----s~hP~a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~ 392 (675)
T TIGR01497 342 -----DDTPEGKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIR 392 (675)
T ss_pred -----CCCcHHHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEE
Confidence 2589999999999987653211 12334567899999877776554 34 4789
Q ss_pred ecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhc
Q 002392 618 KGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIER 697 (928)
Q Consensus 618 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~ 697 (928)
||+++.+++.|...+...+..+.+.++.++++|+|++++|+
T Consensus 393 kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~--------------------------------------- 433 (675)
T TIGR01497 393 KGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE--------------------------------------- 433 (675)
T ss_pred ECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE---------------------------------------
Confidence 99999999988755444556778888999999999999993
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
+.+++|+++++|++||+++++|++|+++||+++|+|||+..+|..+|+++|+.
T Consensus 434 ~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--------------------------- 486 (675)
T TIGR01497 434 DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--------------------------- 486 (675)
T ss_pred CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------
Confidence 56899999999999999999999999999999999999999999999999993
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~ 857 (928)
.+++|++|++|..+++.+++
T Consensus 487 ------------------------------------------------------------~v~a~~~PedK~~~v~~lq~ 506 (675)
T TIGR01497 487 ------------------------------------------------------------DFIAEATPEDKIALIRQEQA 506 (675)
T ss_pred ------------------------------------------------------------EEEcCCCHHHHHHHHHHHHH
Confidence 17889999999999999988
Q ss_pred CCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcCcEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 858 TGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 858 ~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
.|+.|+|+|||.||++||++|||||+|+ |++. |+++||+++++ |..|..+ +.+||..+-.-..+..||
T Consensus 507 ~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~ 577 (675)
T TIGR01497 507 EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFS 577 (675)
T ss_pred cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheee
Confidence 8999999999999999999999999995 3444 99999999997 5558888 899999987666555554
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-70 Score=601.75 Aligned_cols=641 Identities=21% Similarity=0.263 Sum_probs=452.3
Q ss_pred ccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHHhhh
Q 002392 52 QLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQ 131 (928)
Q Consensus 52 ~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~ 131 (928)
..+||+|+.....+++- .++.|.-..|+..|..+...+|+.- ..||..+..|++++.+- +---++|.+.
T Consensus 173 ~~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~fE----~tlV~Qrm~~ 241 (1160)
T KOG0209|consen 173 KHKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAFE----ATLVKQRMRT 241 (1160)
T ss_pred HHHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 34599999999999877 6788888889888888888888874 34666666666655543 3333455555
Q ss_pred h---HHHh--cceeEEEccCCeEEEEeccccccCcEEEecC---CcccCceEEEEeeeCCCceEEEEeccCCCCccceee
Q 002392 132 D---IEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVHK---DEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (928)
Q Consensus 132 ~---~~~n--~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~---ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K 203 (928)
. +.+. +..+.|+| +++|+.+...||.|||+|.|.. ...||||++||. |.|.|||++|||||.|..|
T Consensus 242 lse~R~Mg~kpy~I~v~R-~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~K 315 (1160)
T KOG0209|consen 242 LSEFRTMGNKPYTINVYR-NKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMK 315 (1160)
T ss_pred HHHHHhcCCCceEEEEEe-cCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccc
Confidence 4 4443 56788999 9999999999999999999998 678999999999 9999999999999999999
Q ss_pred ccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceee-cCCeEEEEEEEecCccc--
Q 002392 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLK-NTDYVYGVVVFTGHDTK-- 280 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~-~t~~~~gvVv~tG~~Tk-- 280 (928)
.++.... .+. .+..+..++.+..|.||.+++-..- .-+.++ -.+-++|.|++||.+|.
T Consensus 316 E~Ie~~~----~d~------~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQG 376 (1160)
T KOG0209|consen 316 ESIELRD----SDD------ILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQG 376 (1160)
T ss_pred cccccCC----hhh------hcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCC
Confidence 9987552 111 2233444567788999998853200 001111 13448999999999994
Q ss_pred -eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHH
Q 002392 281 -VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (928)
Q Consensus 281 -i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 359 (928)
+++-......+-+.- |+-..++++++++++++.+ +++|.....+ +..+.. .
T Consensus 377 kLvRtilf~aervTaN----n~Etf~FILFLlVFAiaAa--~Yvwv~Gskd-------------------~~RsrY---K 428 (1160)
T KOG0209|consen 377 KLVRTILFSAERVTAN----NRETFIFILFLLVFAIAAA--GYVWVEGSKD-------------------PTRSRY---K 428 (1160)
T ss_pred ceeeeEEecceeeeec----cHHHHHHHHHHHHHHHHhh--heEEEecccC-------------------cchhhh---h
Confidence 333222222332322 2223333444444444443 3333322111 111111 1
Q ss_pred HHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEE
Q 002392 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (928)
Q Consensus 360 ~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (928)
.|+-+..++...+|.-||+-++++-.-+...+ ++.++.|..+=.+.-.|+||.+|||||||||+..|.|.
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~ 498 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVE 498 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEE
Confidence 56778888999999999998888766665555 78899999999999999999999999999999999999
Q ss_pred EEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHH
Q 002392 440 KCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFF 519 (928)
Q Consensus 440 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 519 (928)
++.-....-+. -.+-++.-.+-.
T Consensus 499 Gvag~~~~~~~---------------------------------------------------------~~~~s~~p~~t~ 521 (1160)
T KOG0209|consen 499 GVAGLSADEGA---------------------------------------------------------LTPASKAPNETV 521 (1160)
T ss_pred ecccccCCccc---------------------------------------------------------ccchhhCCchHH
Confidence 87421110000 000001112457
Q ss_pred HHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCc
Q 002392 520 RVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599 (928)
Q Consensus 520 ~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~r 599 (928)
.++|.||+.....++ ..++|.|+|.+++ .|+.+...+ .+..+ ++.....+|.+.+.|+|..
T Consensus 522 ~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~--~v~p~-------~~~~~~lkI~~ryhFsSaL 582 (1160)
T KOG0209|consen 522 LVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKN--SVCPR-------EGNGKKLKIIQRYHFSSAL 582 (1160)
T ss_pred HHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCc--ccCCC-------cCCCcccchhhhhhHHHHH
Confidence 899999999775543 3479999999986 555554322 11111 1112367889999999999
Q ss_pred ceeEEEEEcCC----CcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHH
Q 002392 600 KRMSVMVRNPE----NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675 (928)
Q Consensus 600 krmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~ 675 (928)
|||||+++..+ -++++.+|||||+|.+++.. .+.++.+...+|+++|.|||+++||.+.+---+
T Consensus 583 KRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~-------- 650 (1160)
T KOG0209|consen 583 KRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS-------- 650 (1160)
T ss_pred HHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccchh--------
Confidence 99999988743 36889999999999999875 567788888999999999999999999842111
Q ss_pred HhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCce
Q 002392 676 AKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK 755 (928)
Q Consensus 676 a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~ 755 (928)
+.-+..++.+|+||+|.|++.|..|+|++++++|+.|.+++++++|+|||++.||.++|+++||......
T Consensus 651 ----------q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~ 720 (1160)
T KOG0209|consen 651 ----------QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTL 720 (1160)
T ss_pred ----------hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCce
Confidence 1112234789999999999999999999999999999999999999999999999999999999877655
Q ss_pred EEEEcCCCchh-hHhh-hhc-chhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHH-HHHHHHh
Q 002392 756 QIVITLDSPDM-EALE-KQG-DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL-EKMFLDL 831 (928)
Q Consensus 756 ~~~i~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~-~~~~~~~ 831 (928)
++......... ..+. .++ ....+.... ....-...+.+.++|..++.+...+. ...+.
T Consensus 721 vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~----------------~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~-- 782 (1160)
T KOG0209|consen 721 VLDLPEEGDGNQLEWVSVDGTIVLPLKPGK----------------KKTLLAETHDLCITGSALDHLQATDQLRRLIP-- 782 (1160)
T ss_pred eeccCccCCCceeeEecCCCceeecCCCCc----------------cchhhhhhhhhhcchhHHHHHhhhHHHHHhhh--
Confidence 55543332110 0000 000 000000000 00001234567999999998876542 22222
Q ss_pred hccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecC
Q 002392 832 AIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG 886 (928)
Q Consensus 832 ~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g 886 (928)
+.-||||+.|.||..++..++..|+.++|||||.||++||++||||||+-+
T Consensus 783 ----hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 783 ----HVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred ----heeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 235999999999999999999999999999999999999999999999843
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-66 Score=601.88 Aligned_cols=461 Identities=33% Similarity=0.471 Sum_probs=384.6
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHhhhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCce
Q 002392 107 LAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGI 186 (928)
Q Consensus 107 ~~~l~~vl~i~~~~~~~~~~~r~~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~ 186 (928)
++++++.++....+...++..+...++.+++++++|+| +| ++.|++++|+|||+|.|++||.|||||+|++ |.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r-~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g~ 76 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLR-NG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----GS 76 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-CC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----cc
Confidence 44555555555555556666655555557889999999 88 9999999999999999999999999999999 77
Q ss_pred EEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCC
Q 002392 187 CYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTD 266 (928)
Q Consensus 187 ~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~ 266 (928)
|.||||+|||||.|+.|.+++.. |+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE--------------------
Confidence 99999999999999999987654 8899999998
Q ss_pred eEEEEEEEecCccce---eecCCCCCCcccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCC
Q 002392 267 YVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIV-YLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (928)
Q Consensus 267 ~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~ 342 (928)
+...|..+|.+|.. ..........+++++++.+++. .++++++++++++.+++|..+.... .
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~------~------- 175 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP------N------- 175 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc------c-------
Confidence 88899999999853 3333444555788999999998 6777777777776666554321100 0
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeE
Q 002392 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (928)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~ 422 (928)
.+...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++++
T Consensus 176 -------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~ 232 (499)
T TIGR01494 176 -------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDY 232 (499)
T ss_pred -------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcE
Confidence 123478899999999999999999999999998887 788999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhh
Q 002392 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (928)
Q Consensus 423 i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (928)
+|||||||||+|+|+|.++++.+.
T Consensus 233 i~fDKTGTLT~~~~~v~~~~~~~~-------------------------------------------------------- 256 (499)
T TIGR01494 233 ICSDKTGTLTKNEMSFKKVSVLGG-------------------------------------------------------- 256 (499)
T ss_pred EEeeCCCccccCceEEEEEEecCC--------------------------------------------------------
Confidence 999999999999999998864321
Q ss_pred cccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccc
Q 002392 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (928)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 582 (928)
++.++||+|.|++++++..+
T Consensus 257 -------------------------------------~~~s~hp~~~ai~~~~~~~~----------------------- 276 (499)
T TIGR01494 257 -------------------------------------EYLSGHPDERALVKSAKWKI----------------------- 276 (499)
T ss_pred -------------------------------------CcCCCChHHHHHHHHhhhcC-----------------------
Confidence 01246999999999886411
Q ss_pred cceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccC
Q 002392 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELG 662 (928)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~ 662 (928)
+...||++.+++|+++++.+++ .|+||+++.|.+.|.. +.+.++.++.+|+|++++|++
T Consensus 277 -------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~~~~a~~--- 335 (499)
T TIGR01494 277 -------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRVLAVASK--- 335 (499)
T ss_pred -------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEEEEEEEC---
Confidence 2357999999999999987443 4789999999988752 233455678899999999952
Q ss_pred HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHH
Q 002392 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (928)
Q Consensus 663 ~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ 742 (928)
-+++|+++++|++|++++++|+.|+++|+++||+|||+..+|..
T Consensus 336 ------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ 379 (499)
T TIGR01494 336 ------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKA 379 (499)
T ss_pred ------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 36999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH
Q 002392 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (928)
Q Consensus 743 ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~ 822 (928)
+|+++|+
T Consensus 380 ia~~lgi------------------------------------------------------------------------- 386 (499)
T TIGR01494 380 IAKELGI------------------------------------------------------------------------- 386 (499)
T ss_pred HHHHcCc-------------------------------------------------------------------------
Confidence 9999885
Q ss_pred HHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 823 ~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+++++|++|..+++.++..|+.|+|+|||.||++||+.|||||+|+ |+++||+++++
T Consensus 387 -----------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~ 443 (499)
T TIGR01494 387 -----------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLD 443 (499)
T ss_pred -----------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEec
Confidence 3478899999999999888999999999999999999999999995 68899999997
Q ss_pred ccc--chhhhhhhchhhhhhcccccccC
Q 002392 903 FRF--LERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 903 f~~--l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
++. +..+ +.+||..++++++++.|+
T Consensus 444 ~~l~~i~~~-~~~~r~~~~~i~~~~~~~ 470 (499)
T TIGR01494 444 DNLSTIVDA-LKEGRKTFSTIKSNIFWA 470 (499)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 443 6666 999999999999998763
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-66 Score=600.02 Aligned_cols=480 Identities=22% Similarity=0.285 Sum_probs=388.6
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHhhh---hHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEee
Q 002392 107 LAPLIVVIGATMAKEGVEDWRRRKQ---DIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180 (928)
Q Consensus 107 ~~~l~~vl~i~~~~~~~~~~~r~~~---~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~s 180 (928)
...+++++.+. +++|++-+.++ .+.+ .++++++++.||++++|+.++|+|||+|.|++||+||+||+|++
T Consensus 177 aa~ii~l~~~G---~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~- 252 (713)
T COG2217 177 AAMLIFLFLLG---RYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS- 252 (713)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe-
Confidence 33344444444 55555555554 3333 48899888756669999999999999999999999999999999
Q ss_pred eCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCc
Q 002392 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDS 260 (928)
Q Consensus 181 s~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs 260 (928)
|...||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 253 ----G~s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~-------------- 287 (713)
T COG2217 253 ----GSSSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS-------------- 287 (713)
T ss_pred ----CcEEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc--------------
Confidence 8899999999999999999999877 9999999998
Q ss_pred eeecCCeEEEEEEEecCccc---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCccccc
Q 002392 261 KLKNTDYVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRW 337 (928)
Q Consensus 261 ~l~~t~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w 337 (928)
+...|..+|.||. +...+++++..++|+|+..|++..++.+++++++++.+++|.++... +|
T Consensus 288 -------l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~ 352 (713)
T COG2217 288 -------LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DW 352 (713)
T ss_pred -------EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cH
Confidence 9999999999995 46667889999999999999999999999999988888766544320 12
Q ss_pred ccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhc
Q 002392 338 YLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEEL 417 (928)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~L 417 (928)
...+.+++.+|+.+|||+|.++.+++...+..+. +++|+++|+...+|.|
T Consensus 353 --------------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l 402 (713)
T COG2217 353 --------------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERL 402 (713)
T ss_pred --------------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhh
Confidence 2268899999999999999999999999999888 9999999999999999
Q ss_pred cceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCcccc
Q 002392 418 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFR 497 (928)
Q Consensus 418 g~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (928)
+++|+|+||||||||+|+|++..+...+. + .
T Consensus 403 ~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--e--------------------------------------------- 433 (713)
T COG2217 403 AKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--E--------------------------------------------- 433 (713)
T ss_pred ccCCEEEEeCCCCCcCCceEEEEEecCCC--C--H---------------------------------------------
Confidence 99999999999999999999998864332 0 0
Q ss_pred chhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCC
Q 002392 498 DERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDP 577 (928)
Q Consensus 498 ~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~ 577 (928)
.+++...+ ..+..++||..+|++++|+..|..-.. . ...
T Consensus 434 ------------------~~~L~laA--------------alE~~S~HPiA~AIv~~a~~~~~~~~~----~-----~~~ 472 (713)
T COG2217 434 ------------------DELLALAA--------------ALEQHSEHPLAKAIVKAAAERGLPDVE----D-----FEE 472 (713)
T ss_pred ------------------HHHHHHHH--------------HHHhcCCChHHHHHHHHHHhcCCCCcc----c-----eee
Confidence 02222222 123346899999999999987621111 0 111
Q ss_pred CcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEE
Q 002392 578 VSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIA 657 (928)
Q Consensus 578 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A 657 (928)
.+|+|.+.. - +|+ .+.-|++..+.+.-. .... .....+.+..+|..++.++
T Consensus 473 i~G~Gv~~~---------------------v-~g~--~v~vG~~~~~~~~~~----~~~~-~~~~~~~~~~~G~t~v~va 523 (713)
T COG2217 473 IPGRGVEAE---------------------V-DGE--RVLVGNARLLGEEGI----DLPL-LSERIEALESEGKTVVFVA 523 (713)
T ss_pred eccCcEEEE---------------------E-CCE--EEEEcCHHHHhhcCC----Cccc-hhhhHHHHHhcCCeEEEEE
Confidence 122222221 1 332 233388866643211 1111 4556778888999988888
Q ss_pred EEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 658 ~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
.|.+++|+++++|++|++++++|++|++.||++.|+|||+.
T Consensus 524 ---------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~ 564 (713)
T COG2217 524 ---------------------------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNR 564 (713)
T ss_pred ---------------------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCH
Confidence 57799999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhh
Q 002392 738 ETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 817 (928)
Q Consensus 738 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~ 817 (928)
.+|..+|+++||.
T Consensus 565 ~~A~~iA~~lGId------------------------------------------------------------------- 577 (713)
T COG2217 565 RTAEAIAKELGID------------------------------------------------------------------- 577 (713)
T ss_pred HHHHHHHHHcChH-------------------------------------------------------------------
Confidence 9999999999993
Q ss_pred HHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcC
Q 002392 818 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSS 896 (928)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aA 896 (928)
.+.+.+.|++|.++|+.++..|+.|+|+|||.||.|+|..|||||||+ |++. |+++|
T Consensus 578 --------------------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaA 635 (713)
T COG2217 578 --------------------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAA 635 (713)
T ss_pred --------------------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhC
Confidence 178899999999999999989999999999999999999999999995 5777 99999
Q ss_pred cEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 897 DYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 897 D~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
|+++++ .+.+..+ +..+|..+++|++++.|+
T Consensus 636 DvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 636 DVVLMRDDLSAVPEA-IDLSRATRRIIKQNLFWA 668 (713)
T ss_pred CEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999996 5668888 899999999999998874
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-65 Score=550.09 Aligned_cols=595 Identities=19% Similarity=0.223 Sum_probs=459.3
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCC--CCchhhHHHHHHHHHHHhHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPY--SAPSVLAPLIVVIGATMAKEGVE 124 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~~~~--~~~~~~~~l~~vl~i~~~~~~~~ 124 (928)
.++|++.||.|+....|-+.+ +.|+..|..|..|..-.++++.... -... -.|..+.-++.+++++....+++
T Consensus 42 ~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~Fve 117 (942)
T KOG0205|consen 42 VEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIE 117 (942)
T ss_pred HHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeee
Confidence 468899999999999888777 5677788899999999999988764 1111 13344455666777888888999
Q ss_pred HHHHhhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccce
Q 002392 125 DWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLK 201 (928)
Q Consensus 125 ~~~r~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~ 201 (928)
+++.-..-.++- ..++.|+| ||+|.+++++.|||||||.++.|++||||++||... .+.||+|.|||||-|+
T Consensus 118 E~nAGn~aa~L~a~LA~KakVlR-DGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLpv 192 (942)
T KOG0205|consen 118 ENNAGNAAAALMAGLAPKAKVLR-DGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLPV 192 (942)
T ss_pred ccccchHHHHHHhccCcccEEee-cCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCcccc
Confidence 998877644443 67899999 999999999999999999999999999999999955 3899999999999999
Q ss_pred eeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce
Q 002392 202 LKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV 281 (928)
Q Consensus 202 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki 281 (928)
.|.+++.+ |+|+.+..|+ +.+||+.||..|..
T Consensus 193 tKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF~ 224 (942)
T KOG0205|consen 193 TKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFF 224 (942)
T ss_pred ccCCCCce---------------------------ecccccccce---------------------EEEEEEEeccceee
Confidence 99999887 9999999998 99999999999965
Q ss_pred eecC--CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHH
Q 002392 282 MQNA--TDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (928)
Q Consensus 282 ~~~~--~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 359 (928)
++-. -.+....+++++.++-+..++++.+. +.+++-+...++.... -| . .
T Consensus 225 GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~R--------~~-----------------r--~ 276 (942)
T KOG0205|consen 225 GKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQHR--------LY-----------------R--D 276 (942)
T ss_pred hhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhhh--------hh-----------------h--h
Confidence 4332 12256779999999999888755432 3333322222222111 00 0 0
Q ss_pred HHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEE
Q 002392 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (928)
Q Consensus 360 ~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (928)
.+-+.+.+++.-||+++|..+++..++++.++ ++++++++...++|+|+.+|++|+|||||||.|++++.
T Consensus 277 ~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvd 346 (942)
T KOG0205|consen 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD 346 (942)
T ss_pred hhhheheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecC
Confidence 22233445556699999999999999999999 89999999999999999999999999999999999986
Q ss_pred E----EEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHH
Q 002392 440 K----CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVI 515 (928)
Q Consensus 440 ~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 515 (928)
+ ++..|.. ++
T Consensus 347 knl~ev~v~gv~----------------------------------------------------------------~D-- 360 (942)
T KOG0205|consen 347 KNLIEVFVKGVD----------------------------------------------------------------KD-- 360 (942)
T ss_pred cCcceeeecCCC----------------------------------------------------------------hH--
Confidence 5 2222211 00
Q ss_pred HHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecc
Q 002392 516 QKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEF 595 (928)
Q Consensus 516 ~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F 595 (928)
+++...+... .. .+.+..+.|++...+.- +..+..|+.++.+||
T Consensus 361 -~~~L~A~rAs--r~-----------en~DAID~A~v~~L~dP----------------------Keara~ikevhF~PF 404 (942)
T KOG0205|consen 361 -DVLLTAARAS--RK-----------ENQDAIDAAIVGMLADP----------------------KEARAGIKEVHFLPF 404 (942)
T ss_pred -HHHHHHHHHh--hh-----------cChhhHHHHHHHhhcCH----------------------HHHhhCceEEeeccC
Confidence 1222222221 11 13578889998765431 112467899999999
Q ss_pred cCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHH
Q 002392 596 TSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675 (928)
Q Consensus 596 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~ 675 (928)
++..||-...+.+++|+....+||||+.|++.|... .+.++.....+++|+.+|+|.|++|++..++..-
T Consensus 405 nPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~-~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~--------- 474 (942)
T KOG0205|consen 405 NPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNED-HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK--------- 474 (942)
T ss_pred CccccceEEEEECCCCCEEEecCCChHHHHHHhhcc-CcchHHHHHHHHHHHHhcchhhhhhhhccccccc---------
Confidence 999999999999999999999999999999999874 4678899999999999999999999998876420
Q ss_pred HhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCce
Q 002392 676 AKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK 755 (928)
Q Consensus 676 a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~ 755 (928)
+.-..-.+|+|+.-+-||+|.++.++|......|..|-|+|||...-+...++.+|+-.+-.+
T Consensus 475 -----------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp 537 (942)
T KOG0205|consen 475 -----------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 537 (942)
T ss_pred -----------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC
Confidence 111245889999999999999999999999999999999999999999999999998543211
Q ss_pred ---EEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhh
Q 002392 756 ---QIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 832 (928)
Q Consensus 756 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~ 832 (928)
....+.++ .+.|...+...+
T Consensus 538 ss~llG~~~~~----------------------------------------------~~~~~~v~elie----------- 560 (942)
T KOG0205|consen 538 SSALLGLGKDG----------------------------------------------SMPGSPVDELIE----------- 560 (942)
T ss_pred chhhccCCCCC----------------------------------------------CCCCCcHHHHhh-----------
Confidence 00000000 001111111110
Q ss_pred ccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhhh
Q 002392 833 IDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLL 910 (928)
Q Consensus 833 ~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~ll 910 (928)
+..=|+.+.|+||..+|+.++..++.|.|.|||.||.|+|+.||+||++.++... |..+||+|+.. .+-+...
T Consensus 561 ---~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~a- 635 (942)
T KOG0205|consen 561 ---KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA- 635 (942)
T ss_pred ---hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH-
Confidence 1235888999999999999999999999999999999999999999999765443 88899999997 4456666
Q ss_pred hhhchhhhhhcccccccC
Q 002392 911 LVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 911 l~~Gr~~~~~i~~~i~y~ 928 (928)
+..+|.+|+|++.+..|.
T Consensus 636 vltSraIfqrmknytiya 653 (942)
T KOG0205|consen 636 VLTSRAIFQRMKNYTIYA 653 (942)
T ss_pred HHHHHHHHHHHhhheeee
Confidence 789999999999988774
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-62 Score=589.54 Aligned_cols=478 Identities=21% Similarity=0.221 Sum_probs=377.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhhhHH---HhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCC
Q 002392 108 APLIVVIGATMAKEGVEDWRRRKQDIE---ANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184 (928)
Q Consensus 108 ~~l~~vl~i~~~~~~~~~~~r~~~~~~---~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~ 184 (928)
..+++++.+....+.+...|.++..+. +.+.+++|+| ||++++|++++|+|||+|+|++||+|||||+|++
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir-~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~----- 283 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLR-DGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS----- 283 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----
Confidence 334444444444444444444444333 3478999999 9999999999999999999999999999999999
Q ss_pred ceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeec
Q 002392 185 GICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKN 264 (928)
Q Consensus 185 G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~ 264 (928)
|.+.||||.|||||.|+.|.+++.. |+||++++|.
T Consensus 284 g~~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~------------------ 318 (741)
T PRK11033 284 PFASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL------------------ 318 (741)
T ss_pred CcEEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce------------------
Confidence 7799999999999999999988755 9999999998
Q ss_pred CCeEEEEEEEecCccce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCC
Q 002392 265 TDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQP 341 (928)
Q Consensus 265 t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~ 341 (928)
+.+.|+.+|.+|.+ .....+++.+++|+|+.+++++.++.+++++++++.+++|.++... +|
T Consensus 319 ---~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~---- 383 (741)
T PRK11033 319 ---VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PW---- 383 (741)
T ss_pred ---EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CH----
Confidence 99999999999954 5555677788999999999999999999999999888776432210 12
Q ss_pred CCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhcccee
Q 002392 342 DDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVD 421 (928)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~ 421 (928)
...+.+++.+++.+|||+|.++.+++...+.... +++|+++|+.+.+|.|++++
T Consensus 384 ----------------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~ 437 (741)
T PRK11033 384 ----------------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVT 437 (741)
T ss_pred ----------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCC
Confidence 1146678899999999999999988888887776 88999999999999999999
Q ss_pred EEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhh
Q 002392 422 TILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERI 501 (928)
Q Consensus 422 ~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (928)
+||||||||||+|+|++.++...+.. .
T Consensus 438 ~v~fDKTGTLT~g~~~v~~~~~~~~~-~---------------------------------------------------- 464 (741)
T PRK11033 438 TVAFDKTGTLTEGKPQVTDIHPATGI-S---------------------------------------------------- 464 (741)
T ss_pred EEEEeCCCCCcCCceEEEEEEecCCC-C----------------------------------------------------
Confidence 99999999999999999987643210 0
Q ss_pred hcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCccc
Q 002392 502 MNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQ 581 (928)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 581 (928)
. .+++...+.. +..+.||.+.|+++++++.|+.
T Consensus 465 ----------~---~~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~-------------------- 497 (741)
T PRK11033 465 ----------E---SELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA-------------------- 497 (741)
T ss_pred ----------H---HHHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC--------------------
Confidence 0 0222222211 1124799999999999876542
Q ss_pred ccceEEEEeEeecccCCcceeEE-EEE-cCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEE
Q 002392 582 KVNRVYELLHVLEFTSSRKRMSV-MVR-NPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYR 659 (928)
Q Consensus 582 ~~~~~~~il~~~~F~s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k 659 (928)
+||.++++.+.- -++ .-+|..+. -|+++.+.+ . .+.....++.+..+|+|++++|
T Consensus 498 -----------~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~-~-------~~~~~~~~~~~~~~g~~~v~va-- 554 (741)
T PRK11033 498 -----------IPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP-L-------ADAFAGQINELESAGKTVVLVL-- 554 (741)
T ss_pred -----------CCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh-c-------cHHHHHHHHHHHhCCCEEEEEE--
Confidence 234444444321 121 11344333 388877654 1 1234455678899999999999
Q ss_pred ccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 660 ~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
.|.+++|+++++|++|++++++|+.|++.|++++|+|||+..+
T Consensus 555 -------------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~ 597 (741)
T PRK11033 555 -------------------------------------RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRA 597 (741)
T ss_pred -------------------------------------ECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 3678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHH
Q 002392 740 AINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA 819 (928)
Q Consensus 740 a~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~ 819 (928)
|..+|+++||.
T Consensus 598 a~~ia~~lgi~--------------------------------------------------------------------- 608 (741)
T PRK11033 598 AAAIAGELGID--------------------------------------------------------------------- 608 (741)
T ss_pred HHHHHHHcCCC---------------------------------------------------------------------
Confidence 99999999993
Q ss_pred hHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEe
Q 002392 820 LDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~v 899 (928)
.+++..|++|..+++.+++. ..|+|+|||.||.+||+.|||||+|++. ...++++||++
T Consensus 609 -------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~-~~~a~~~adiv 667 (741)
T PRK11033 609 -------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSG-TDVALETADAA 667 (741)
T ss_pred -------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCC-CHHHHHhCCEE
Confidence 34467899999999999754 5899999999999999999999999633 23388999999
Q ss_pred ecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 900 IAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 900 i~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
+.+ +..|..+ +..||..+++|++++.|+
T Consensus 668 l~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a 697 (741)
T PRK11033 668 LTHNRLRGLAQM-IELSRATHANIRQNITIA 697 (741)
T ss_pred EecCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 985 5557777 899999999999998763
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-62 Score=551.59 Aligned_cols=502 Identities=21% Similarity=0.234 Sum_probs=394.7
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHhhh------hHHHhcceeEEEccCCe-EEEEeccccccCcEEEecCCcccCceE
Q 002392 103 APSVLAPLIVVIGATMAKEGVEDWRRRKQ------DIEANNRKVKVYGQDHT-FVETKWKNLRVGDLVKVHKDEYFPADL 175 (928)
Q Consensus 103 ~~~~~~~l~~vl~i~~~~~~~~~~~r~~~------~~~~n~~~~~v~r~~g~-~~~i~~~~L~vGDII~l~~ge~vPaD~ 175 (928)
+|.+...|+.++.+.- +.|..-++|+ +..+.+.++.++. +|+ .++|+.+.|++||+|+|.+|++||+||
T Consensus 340 fFdt~~MLi~fi~lgr---~LE~~Ak~kts~alskLmsl~p~~a~ii~-~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG 415 (951)
T KOG0207|consen 340 FFDTSPMLITFITLGR---WLESLAKGKTSEALSKLMSLAPSKATIIE-DGSEEKEIPVDLVQVGDIVKVKPGEKIPVDG 415 (951)
T ss_pred hccccHHHHHHHHHHH---HHHHHhhccchHHHHHHhhcCcccceEee-cCCcceEeeeeeeccCCEEEECCCCcccccc
Confidence 4444444444554444 4444444544 2333588999998 886 899999999999999999999999999
Q ss_pred EEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccc
Q 002392 176 LLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQI 255 (928)
Q Consensus 176 ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~ 255 (928)
++++ |.++||||.+|||+.|+.|++++.. .+|+++.+|.
T Consensus 416 ~Vv~-----Gss~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~--------- 454 (951)
T KOG0207|consen 416 VVVD-----GSSEVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT--------- 454 (951)
T ss_pred EEEe-----CceeechhhccCCceecccCCCCee---------------------------eeeeecCCce---------
Confidence 9999 8899999999999999999998866 8999999998
Q ss_pred cccCceeecCCeEEEEEEEecCccc---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCC
Q 002392 256 LLRDSKLKNTDYVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGG 332 (928)
Q Consensus 256 ~~rgs~l~~t~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 332 (928)
++.-++.+|.||. |.+..++++..++|+|+.+|+++.++.++++++++..+++|.+.....
T Consensus 455 ------------l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---- 518 (951)
T KOG0207|consen 455 ------------LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV---- 518 (951)
T ss_pred ------------EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc----
Confidence 9999999999995 567778899999999999999999999999999999999988766533
Q ss_pred cccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeeccc
Q 002392 333 KIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSN 412 (928)
Q Consensus 333 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~ 412 (928)
.||.. .++..+...|..++.+++.+|||+|.++.+++.+.+...- +.+|+++|..+
T Consensus 519 ---~~~~~-----------~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge 574 (951)
T KOG0207|consen 519 ---FKYPR-----------SFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGE 574 (951)
T ss_pred ---ccCcc-----------hhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcH
Confidence 23211 1112345578899999999999999999998877766655 88999999999
Q ss_pred chhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccC
Q 002392 413 LNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVK 492 (928)
Q Consensus 413 ~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (928)
.+|.+.+|++|.||||||||+|++.+.++.+.....
T Consensus 575 ~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~-------------------------------------------- 610 (951)
T KOG0207|consen 575 ALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI-------------------------------------------- 610 (951)
T ss_pred HHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc--------------------------------------------
Confidence 999999999999999999999999999887554320
Q ss_pred CccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEE
Q 002392 493 GFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISL 572 (928)
Q Consensus 493 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~ 572 (928)
..++++...+ ..+..++||...|+++||++.+- .++...+
T Consensus 611 ---------------------~~~e~l~~v~--------------a~Es~SeHPig~AIv~yak~~~~-----~~~~~~~ 650 (951)
T KOG0207|consen 611 ---------------------SLKEALALVA--------------AMESGSEHPIGKAIVDYAKEKLV-----EPNPEGV 650 (951)
T ss_pred ---------------------cHHHHHHHHH--------------HHhcCCcCchHHHHHHHHHhccc-----ccCcccc
Confidence 0112222222 12223579999999999998761 1111111
Q ss_pred EecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCe
Q 002392 573 HELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLR 652 (928)
Q Consensus 573 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr 652 (928)
......+|++ ....+.+. +.+ .+-|.-+-|.. ......+++...+++....|..
T Consensus 651 ~~~~~~pg~g-----------------~~~~~~~~--~~~---i~iGN~~~~~r----~~~~~~~~i~~~~~~~e~~g~t 704 (951)
T KOG0207|consen 651 LSFEYFPGEG-----------------IYVTVTVD--GNE---VLIGNKEWMSR----NGCSIPDDILDALTESERKGQT 704 (951)
T ss_pred ceeecccCCC-----------------cccceEEe--eeE---EeechHHHHHh----cCCCCchhHHHhhhhHhhcCce
Confidence 1111111221 11111111 122 22266544433 2223345677788888899999
Q ss_pred eeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEE
Q 002392 653 TLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVL 732 (928)
Q Consensus 653 ~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~il 732 (928)
+.++| -|.++.|+++++|++|+++..+|+.||+.||++.|+
T Consensus 705 vv~v~---------------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mL 745 (951)
T KOG0207|consen 705 VVYVA---------------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVML 745 (951)
T ss_pred EEEEE---------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEE
Confidence 99998 588999999999999999999999999999999999
Q ss_pred cCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEc
Q 002392 733 TGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVID 812 (928)
Q Consensus 733 TGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 812 (928)
|||+..+|.++|+++|+-
T Consensus 746 TGDn~~aA~svA~~VGi~-------------------------------------------------------------- 763 (951)
T KOG0207|consen 746 TGDNDAAARSVAQQVGID-------------------------------------------------------------- 763 (951)
T ss_pred cCCCHHHHHHHHHhhCcc--------------------------------------------------------------
Confidence 999999999999999962
Q ss_pred cchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchh
Q 002392 813 GKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQ 891 (928)
Q Consensus 813 g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ 891 (928)
.|+|...|+||.+.|+.+++.++.|+|+|||.||.|+|.+|||||+|+ |++.
T Consensus 764 -------------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v-- 816 (951)
T KOG0207|consen 764 -------------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDV-- 816 (951)
T ss_pred -------------------------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHH--
Confidence 389999999999999999999999999999999999999999999995 5566
Q ss_pred hhhcCcEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 892 AVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 892 ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
|.++||++++. .+.+... +..+|...+|++.++.|+
T Consensus 817 AieaADIVLmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A 854 (951)
T KOG0207|consen 817 AIEAADIVLMRNDLRDVPFA-IDLSRKTVKRIKLNFVWA 854 (951)
T ss_pred HHhhCCEEEEccchhhhHHH-HHHHHHHHhhHHHHHHHH
Confidence 99999999996 4556666 889999999999988764
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-61 Score=562.14 Aligned_cols=491 Identities=21% Similarity=0.232 Sum_probs=383.9
Q ss_pred CCchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHH---hcceeEEEccCC-eEEEEeccccccCcEEEecCCcccCceEEE
Q 002392 102 SAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEA---NNRKVKVYGQDH-TFVETKWKNLRVGDLVKVHKDEYFPADLLL 177 (928)
Q Consensus 102 ~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~---n~~~~~v~r~~g-~~~~i~~~~L~vGDII~l~~ge~vPaD~il 177 (928)
+.|.....++++++++...+.+.+++..+..+.+ ++.+++|+| +| +++++++++|+|||+|.|++||.|||||+|
T Consensus 16 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r-~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 94 (556)
T TIGR01525 16 GLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQ-GDGSEEEVPVEELQVGDIVIVRPGERIPVDGVV 94 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-CCCeEEEEEHHHCCCCCEEEECCCCEeccceEE
Confidence 3445566666666666666666666655554444 467899999 74 999999999999999999999999999999
Q ss_pred EeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccc
Q 002392 178 LSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILL 257 (928)
Q Consensus 178 L~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~ 257 (928)
++ |.+.||||.|||||.|+.|.+++.. |+||.+.+|.
T Consensus 95 i~-----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~----------- 131 (556)
T TIGR01525 95 IS-----GESEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS----------- 131 (556)
T ss_pred Ee-----cceEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce-----------
Confidence 99 7799999999999999999887544 9999999998
Q ss_pred cCceeecCCeEEEEEEEecCccceee---cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcc
Q 002392 258 RDSKLKNTDYVYGVVVFTGHDTKVMQ---NATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKI 334 (928)
Q Consensus 258 rgs~l~~t~~~~gvVv~tG~~Tki~~---~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 334 (928)
+.++|+.||.+|++.+ ....++.+++++++.+++++.++.+++++++++.+++|.+...
T Consensus 132 ----------~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-------- 193 (556)
T TIGR01525 132 ----------LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-------- 193 (556)
T ss_pred ----------EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence 9999999999997543 3445567789999999999999999888888888776543211
Q ss_pred cccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccch
Q 002392 335 RRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLN 414 (928)
Q Consensus 335 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~ 414 (928)
| ..+.+++.+++..|||+|+++++++...+..++ .++++++|+++.+
T Consensus 194 --~---------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~l 240 (556)
T TIGR01525 194 --L---------------------GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDAL 240 (556)
T ss_pred --c---------------------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHH
Confidence 0 267889999999999999999999999999988 8999999999999
Q ss_pred hhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCc
Q 002392 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGF 494 (928)
Q Consensus 415 e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (928)
|.||+++++|||||||||+|+|++.++...+....
T Consensus 241 e~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~--------------------------------------------- 275 (556)
T TIGR01525 241 EKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASI--------------------------------------------- 275 (556)
T ss_pred HHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCc---------------------------------------------
Confidence 99999999999999999999999998864322100
Q ss_pred cccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEe
Q 002392 495 NFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHE 574 (928)
Q Consensus 495 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~ 574 (928)
...+++.. |..+. ..+.||.+.|+++++++.|..... +.
T Consensus 276 -------------------~~~~~l~~---a~~~e-----------~~~~hp~~~Ai~~~~~~~~~~~~~--~~------ 314 (556)
T TIGR01525 276 -------------------SEEELLAL---AAALE-----------QSSSHPLARAIVRYAKKRGLELPK--QE------ 314 (556)
T ss_pred -------------------cHHHHHHH---HHHHh-----------ccCCChHHHHHHHHHHhcCCCccc--cc------
Confidence 00122222 22221 124699999999999987653211 00
Q ss_pred cCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeee
Q 002392 575 LDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTL 654 (928)
Q Consensus 575 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l 654 (928)
.+ ..+ ..+.+...+ +|. .-+..|+++.+ + .. . .........++.++.+|+|++
T Consensus 315 -----------~~---~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~-~~--~-~~~~~~~~~~~~~~~~g~~~~ 367 (556)
T TIGR01525 315 -----------DV---EEV----PGKGVEATV---DGQ-EEVRIGNPRLL-E-LA--A-EPISASPDLLNEGESQGKTVV 367 (556)
T ss_pred -----------Ce---eEe----cCCeEEEEE---CCe-eEEEEecHHHH-h-hc--C-CCchhhHHHHHHHhhCCcEEE
Confidence 00 000 011222222 221 12333776554 1 11 1 111223456677889999999
Q ss_pred EEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcC-CeEEEEc
Q 002392 655 VIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAG-IKVWVLT 733 (928)
Q Consensus 655 ~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aG-Ikv~ilT 733 (928)
.+| .|.+++|.+.++|+++|+++++|+.|+++| ++++|+|
T Consensus 368 ~v~---------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivT 408 (556)
T TIGR01525 368 FVA---------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLT 408 (556)
T ss_pred EEE---------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEe
Confidence 998 467999999999999999999999999999 9999999
Q ss_pred CCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEcc
Q 002392 734 GDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDG 813 (928)
Q Consensus 734 GD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g 813 (928)
||+..++..+++++|+.
T Consensus 409 gd~~~~a~~i~~~lgi~--------------------------------------------------------------- 425 (556)
T TIGR01525 409 GDNRSAAEAVAAELGID--------------------------------------------------------------- 425 (556)
T ss_pred CCCHHHHHHHHHHhCCC---------------------------------------------------------------
Confidence 99999999999999992
Q ss_pred chhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhh
Q 002392 814 KSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAV 893 (928)
Q Consensus 814 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak 893 (928)
.+++++.|++|..+++.++..+..|+|+|||.||++|++.||+||++++ ....++
T Consensus 426 ------------------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~-~~~~~~ 480 (556)
T TIGR01525 426 ------------------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGA-GSDVAI 480 (556)
T ss_pred ------------------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCC-CCHHHH
Confidence 1667888999999999998788899999999999999999999999964 233478
Q ss_pred hcCcEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 894 MSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 894 ~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
..||+++.+ +..+..+ +..||..++++++++.|+
T Consensus 481 ~~Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a 516 (556)
T TIGR01525 481 EAADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWA 516 (556)
T ss_pred HhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 899999994 6668888 899999999999998763
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-59 Score=549.87 Aligned_cols=475 Identities=22% Similarity=0.252 Sum_probs=373.5
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEe
Q 002392 103 APSVLAPLIVVIGATMAKEGVEDWRRRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLS 179 (928)
Q Consensus 103 ~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ 179 (928)
++.....+++++.++...|.+...+.++..+.+ .+.+++++|.+|.+++|+.++|+|||+|.|++||.|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 445555556666665555554444444443333 47889999845778999999999999999999999999999999
Q ss_pred eeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccC
Q 002392 180 SIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRD 259 (928)
Q Consensus 180 ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rg 259 (928)
|.+.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 133 -----g~~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------- 167 (562)
T TIGR01511 133 -----GESEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------- 167 (562)
T ss_pred -----CceEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce-------------
Confidence 8899999999999999999988755 9999999998
Q ss_pred ceeecCCeEEEEEEEecCccce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccc
Q 002392 260 SKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRR 336 (928)
Q Consensus 260 s~l~~t~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 336 (928)
+.+.|+.||.+|.+ ......++.+++++++.+++++.++++++++++++.+++|.
T Consensus 168 --------~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------- 225 (562)
T TIGR01511 168 --------LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------- 225 (562)
T ss_pred --------EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 99999999999965 44455667788999999999999999888888877765542
Q ss_pred cccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhh
Q 002392 337 WYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEE 416 (928)
Q Consensus 337 w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~ 416 (928)
..+.+++.+++.+|||+|+++++++...+..++ +++|+++|+++.+|.
T Consensus 226 ----------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~ 273 (562)
T TIGR01511 226 ----------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALER 273 (562)
T ss_pred ----------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHH
Confidence 157788999999999999999999999999888 899999999999999
Q ss_pred ccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccc
Q 002392 417 LGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNF 496 (928)
Q Consensus 417 Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (928)
|+++++||||||||||+|+|++..+...+...
T Consensus 274 l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~------------------------------------------------ 305 (562)
T TIGR01511 274 AANIDTVVFDKTGTLTQGKPTVTDVHVFGDRD------------------------------------------------ 305 (562)
T ss_pred hhCCCEEEECCCCCCcCCCEEEEEEecCCCCC------------------------------------------------
Confidence 99999999999999999999999875432100
Q ss_pred cchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecC
Q 002392 497 RDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELD 576 (928)
Q Consensus 497 ~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~ 576 (928)
. .+++..++ .+ +..+.||.+.|+++++++.|.....-
T Consensus 306 ---------------~---~~~l~~aa---~~-----------e~~s~HPia~Ai~~~~~~~~~~~~~~----------- 342 (562)
T TIGR01511 306 ---------------R---TELLALAA---AL-----------EAGSEHPLAKAIVSYAKEKGITLVEV----------- 342 (562)
T ss_pred ---------------H---HHHHHHHH---HH-----------hccCCChHHHHHHHHHHhcCCCcCCC-----------
Confidence 0 12222222 11 11246999999999998876532110
Q ss_pred CCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEE
Q 002392 577 PVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVI 656 (928)
Q Consensus 577 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~ 656 (928)
..++ .+ ..+.+...+ +|. -+..|+++.+.+. +.. +..+..+|.+++.+
T Consensus 343 --------~~~~---~~----~g~Gi~~~~---~g~--~~~iG~~~~~~~~----~~~--------~~~~~~~g~~~~~~ 390 (562)
T TIGR01511 343 --------SDFK---AI----PGIGVEGTV---EGT--KIQLGNEKLLGEN----AIK--------IDGKAEQGSTSVLV 390 (562)
T ss_pred --------CCeE---EE----CCceEEEEE---CCE--EEEEECHHHHHhC----CCC--------CChhhhCCCEEEEE
Confidence 0000 00 012222222 232 2345888765331 111 11245789998888
Q ss_pred EEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCc
Q 002392 657 AYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDK 736 (928)
Q Consensus 657 A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~ 736 (928)
+ .|.+++|+++++|++||+++++|+.|++.|++++|+|||+
T Consensus 391 ~---------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~ 431 (562)
T TIGR01511 391 A---------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDN 431 (562)
T ss_pred E---------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 7 5789999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchh
Q 002392 737 METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSL 816 (928)
Q Consensus 737 ~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l 816 (928)
..++..+++++|+.
T Consensus 432 ~~~a~~ia~~lgi~------------------------------------------------------------------ 445 (562)
T TIGR01511 432 RKTAKAVAKELGIN------------------------------------------------------------------ 445 (562)
T ss_pred HHHHHHHHHHcCCc------------------------------------------------------------------
Confidence 99999999999981
Q ss_pred hHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcC
Q 002392 817 DFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 896 (928)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aA 896 (928)
++++..|++|..+++.++..++.|+|+|||.||++|++.||+||+|+.. ...++.+|
T Consensus 446 ----------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g-~~~a~~~A 502 (562)
T TIGR01511 446 ----------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAG-TDVAIEAA 502 (562)
T ss_pred ----------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCc-CHHHHhhC
Confidence 3456679999999999987889999999999999999999999999643 23378999
Q ss_pred cEeec--ccccchhhhhhhchhhhhhcccccccC
Q 002392 897 DYAIA--QFRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 897 D~vi~--~f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
|+++. +++.|..+ +..||..++++++++.|+
T Consensus 503 dvvl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 503 DVVLMRNDLNDVATA-IDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99998 56778888 999999999999988763
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-59 Score=545.38 Aligned_cols=481 Identities=22% Similarity=0.252 Sum_probs=376.3
Q ss_pred HHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHHhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEE
Q 002392 87 FLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLV 163 (928)
Q Consensus 87 ~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII 163 (928)
++++++++++. +.|.....++++++++...+.+.+++..+..+.+ ++.+++|+| +|+++.+++++|+|||+|
T Consensus 5 ~~~a~~~~~~~----~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r-~g~~~~i~~~~l~~GDiv 79 (536)
T TIGR01512 5 MALAALGAVAI----GEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLR-GGSLEEVAVEELKVGDVV 79 (536)
T ss_pred HHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-CCEEEEEEHHHCCCCCEE
Confidence 34444444442 3344445566666666666666666655554433 578999999 999999999999999999
Q ss_pred EecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEE
Q 002392 164 KVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQY 243 (928)
Q Consensus 164 ~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~ 243 (928)
.|++||.|||||+|++ |.+.||||+|||||.|+.|.+++.. |+||.+.
T Consensus 80 ~v~~G~~iP~Dg~ii~-----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~ 127 (536)
T TIGR01512 80 VVKPGERVPVDGVVLS-----GTSTVDESALTGESVPVEKAPGDEV---------------------------FAGAINL 127 (536)
T ss_pred EEcCCCEeecceEEEe-----CcEEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEEC
Confidence 9999999999999999 7899999999999999999987644 9999999
Q ss_pred CCeEeecCcccccccCceeecCCeEEEEEEEecCcccee---ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002392 244 EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVF 320 (928)
Q Consensus 244 ~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~ 320 (928)
+|. +.++|+.||.+|.+. .....++.+++++++.+++++.++.+++++++++.+++
T Consensus 128 ~G~---------------------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (536)
T TIGR01512 128 DGV---------------------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLV 186 (536)
T ss_pred Cce---------------------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 999999999999754 33445567789999999999999999888888777665
Q ss_pred HhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccc
Q 002392 321 FGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYE 400 (928)
Q Consensus 321 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~ 400 (928)
+.+.. .| ...+.+++.+++.+|||+|+++++++...+..++
T Consensus 187 ~~~~~----------~~--------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~--------- 227 (536)
T TIGR01512 187 PGLLK----------RW--------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA--------- 227 (536)
T ss_pred HHHhc----------cc--------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH---------
Confidence 54221 01 1157778899999999999999999999999888
Q ss_pred cCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCC
Q 002392 401 DTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480 (928)
Q Consensus 401 ~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (928)
.++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 228 -~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------ 270 (536)
T TIGR01512 228 -ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------ 270 (536)
T ss_pred -HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------------
Confidence 8999999999999999999999999999999999999876410
Q ss_pred CCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCc
Q 002392 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGF 560 (928)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~ 560 (928)
+++...+.+. ..+.||.+.|+++++++.+
T Consensus 271 ------------------------------------~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~- 299 (536)
T TIGR01512 271 ------------------------------------EVLRLAAAAE--------------QASSHPLARAIVDYARKRE- 299 (536)
T ss_pred ------------------------------------HHHHHHHHHh--------------ccCCCcHHHHHHHHHHhcC-
Confidence 1222222111 1246999999999998754
Q ss_pred EEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHH
Q 002392 561 QFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETR 640 (928)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~ 640 (928)
.+ .. .+ .+| .+.+...+ +|..+ ..|+++.+.+. +
T Consensus 300 ~~-----~~-----------------~~---~~~----g~gi~~~~---~g~~~--~ig~~~~~~~~----~-------- 333 (536)
T TIGR01512 300 NV-----ES-----------------VE---EVP----GEGVRAVV---DGGEV--RIGNPRSLEAA----V-------- 333 (536)
T ss_pred CC-----cc-----------------eE---Eec----CCeEEEEE---CCeEE--EEcCHHHHhhc----C--------
Confidence 00 00 00 011 11122111 23322 23776544221 0
Q ss_pred HHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHH
Q 002392 641 RHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720 (928)
Q Consensus 641 ~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~ 720 (928)
+..+..+|.+++.++ .|..++|.+.++|+++++++++|+
T Consensus 334 --~~~~~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~ 372 (536)
T TIGR01512 334 --GARPESAGKTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIA 372 (536)
T ss_pred --CcchhhCCCeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHH
Confidence 114566788887776 578999999999999999999999
Q ss_pred HHHHcCC-eEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccc
Q 002392 721 KLAQAGI-KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNS 799 (928)
Q Consensus 721 ~l~~aGI-kv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (928)
.|+++|+ +++|+|||+..++..+++++|+..
T Consensus 373 ~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------------------------ 404 (536)
T TIGR01512 373 ELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------------------------------------ 404 (536)
T ss_pred HHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh------------------------------------------------
Confidence 9999999 999999999999999999999931
Q ss_pred cccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCC
Q 002392 800 AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEAD 879 (928)
Q Consensus 800 ~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~ 879 (928)
++++..|++|..+++.++..+..|+|+|||.||++|++.||
T Consensus 405 ---------------------------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~ 445 (536)
T TIGR01512 405 ---------------------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAAD 445 (536)
T ss_pred ---------------------------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCC
Confidence 45677899999999999888899999999999999999999
Q ss_pred eeEEecCCcchhhhhcCcEeec--ccccchhhhhhhchhhhhhccccccc
Q 002392 880 IGVGISGVEGMQAVMSSDYAIA--QFRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 880 vGIam~g~e~~~ak~aAD~vi~--~f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+||+++......++.+||+++. ++..|..+ +..||..++++++++.|
T Consensus 446 vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~ 494 (536)
T TIGR01512 446 VGIAMGASGSDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVI 494 (536)
T ss_pred EEEEeCCCccHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999962223338899999995 57778888 99999999999998876
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-57 Score=554.87 Aligned_cols=472 Identities=18% Similarity=0.214 Sum_probs=373.2
Q ss_pred hHHHHHHHHHhhhhH---HH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEec
Q 002392 119 AKEGVEDWRRRKQDI---EA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETM 192 (928)
Q Consensus 119 ~~~~~~~~~r~~~~~---~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s 192 (928)
+-+++|.+-+.++.+ .+ .+.+++|+| +|.+++|+.++|+|||+|+|++||+|||||+|++ |.+.||||
T Consensus 298 ~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~-~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~-----g~~~vdeS 371 (834)
T PRK10671 298 LGHMLEARARQRSSKALEKLLDLTPPTARVVT-DEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ-----GEAWLDEA 371 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe-CCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----ceEEEeeh
Confidence 335555555554433 33 478899999 9999999999999999999999999999999999 88999999
Q ss_pred cCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEE
Q 002392 193 NLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVV 272 (928)
Q Consensus 193 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvV 272 (928)
.|||||.|+.|.+++.. |+||++.+|. +.+.|
T Consensus 372 ~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~---------------------~~~~v 403 (834)
T PRK10671 372 MLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS---------------------VLFRA 403 (834)
T ss_pred hhcCCCCCEecCCCCEE---------------------------Eecceeccee---------------------EEEEE
Confidence 99999999999998755 9999999998 99999
Q ss_pred EEecCccce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccC
Q 002392 273 VFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYD 349 (928)
Q Consensus 273 v~tG~~Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 349 (928)
+.||.+|.+ ....++++..++++++.+++++.++++++++++++.+++|.+... |
T Consensus 404 ~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~----------~------------ 461 (834)
T PRK10671 404 SAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP----------A------------ 461 (834)
T ss_pred EEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------c------------
Confidence 999999964 444556667789999999999999999998888888776643211 0
Q ss_pred CCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCC
Q 002392 350 PRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 429 (928)
Q Consensus 350 ~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTG 429 (928)
..+...+.+++.+++.+|||+|+++++++...+..++ +++|+++|+++.+|.||+++++||||||
T Consensus 462 -----~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~fDKTG 526 (834)
T PRK10671 462 -----PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVFDKTG 526 (834)
T ss_pred -----hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEEcCCC
Confidence 0122367788999999999999999999999999988 8999999999999999999999999999
Q ss_pred ccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCC
Q 002392 430 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNE 509 (928)
Q Consensus 430 TLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 509 (928)
|||+|+|++..+...+.. .
T Consensus 527 TLT~g~~~v~~~~~~~~~-~------------------------------------------------------------ 545 (834)
T PRK10671 527 TLTEGKPQVVAVKTFNGV-D------------------------------------------------------------ 545 (834)
T ss_pred ccccCceEEEEEEccCCC-C------------------------------------------------------------
Confidence 999999999877532210 0
Q ss_pred CchhHHHHHHH-HHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEE
Q 002392 510 PHSDVIQKFFR-VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 588 (928)
Q Consensus 510 ~~~~~~~~~~~-~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (928)
. .+++. +.+++. .+.||.+.|++++++..... . + ..++
T Consensus 546 --~---~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~-------~------------~~~~ 584 (834)
T PRK10671 546 --E---AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q-------V------------NGFR 584 (834)
T ss_pred --H---HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C-------c------------ccce
Confidence 0 01222 222221 23699999999988643210 0 0 1111
Q ss_pred EeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHH
Q 002392 589 LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI 668 (928)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~ 668 (928)
.+. .+.+...+ +|. .+..|+++.+.+... ..+.+...++.+..+|.+++++|
T Consensus 585 ~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~v~va----------- 636 (834)
T PRK10671 585 TLR-------GLGVSGEA---EGH--ALLLGNQALLNEQQV-----DTKALEAEITAQASQGATPVLLA----------- 636 (834)
T ss_pred Eec-------ceEEEEEE---CCE--EEEEeCHHHHHHcCC-----ChHHHHHHHHHHHhCCCeEEEEE-----------
Confidence 000 01111111 343 234599886643211 12345566778889999999998
Q ss_pred HHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcC
Q 002392 669 WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS 748 (928)
Q Consensus 669 ~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~g 748 (928)
.|..++|+++++|++|++++++|+.|++.|++++|+|||+..++..+++++|
T Consensus 637 ----------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lg 688 (834)
T PRK10671 637 ----------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG 688 (834)
T ss_pred ----------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 3567999999999999999999999999999999999999999999999999
Q ss_pred CcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHH
Q 002392 749 LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMF 828 (928)
Q Consensus 749 i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~ 828 (928)
|.
T Consensus 689 i~------------------------------------------------------------------------------ 690 (834)
T PRK10671 689 ID------------------------------------------------------------------------------ 690 (834)
T ss_pred CC------------------------------------------------------------------------------
Confidence 83
Q ss_pred HHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccc
Q 002392 829 LDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFL 906 (928)
Q Consensus 829 ~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l 906 (928)
.++++..|++|..+++.++..+..|+|+|||.||++|++.||+||+|++. ...++++||+++.+ +..|
T Consensus 691 ---------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g-~~~a~~~ad~vl~~~~~~~i 760 (834)
T PRK10671 691 ---------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGG-SDVAIETAAITLMRHSLMGV 760 (834)
T ss_pred ---------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCC-CHHHHHhCCEEEecCCHHHH
Confidence 16678889999999999988889999999999999999999999999643 23389999999995 5558
Q ss_pred hhhhhhhchhhhhhcccccccC
Q 002392 907 ERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 907 ~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
..+ +..||..++++++++.|+
T Consensus 761 ~~~-i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 761 ADA-LAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHH-HHHHHHHHHHHHHHHHHH
Confidence 888 899999999999998764
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-50 Score=423.53 Aligned_cols=445 Identities=20% Similarity=0.249 Sum_probs=346.2
Q ss_pred cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChh
Q 002392 137 NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEE 216 (928)
Q Consensus 137 ~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~ 216 (928)
...+++++.+|.++.+++.+|+.||+|+|+.||.||+||.+++ |.++||||.+||||.|+.|.++....
T Consensus 103 ~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe-----G~asVdESAITGESaPViresGgD~s------ 171 (681)
T COG2216 103 ETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE-----GVASVDESAITGESAPVIRESGGDFS------ 171 (681)
T ss_pred HHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe-----eeeecchhhccCCCcceeeccCCCcc------
Confidence 3457777756999999999999999999999999999999999 99999999999999999999874331
Q ss_pred hhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccc---eeecCCCCCCccc
Q 002392 217 SFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTK---VMQNATDPPSKRS 293 (928)
Q Consensus 217 ~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s 293 (928)
-+-.||.+ . ++|+...+...--+|. +...++.+..+++
T Consensus 172 ------------------sVtGgT~v--------------------~-SD~l~irita~pG~sFlDrMI~LVEgA~R~KT 212 (681)
T COG2216 172 ------------------SVTGGTRV--------------------L-SDWLKIRITANPGETFLDRMIALVEGAERQKT 212 (681)
T ss_pred ------------------cccCCcEE--------------------e-eeeEEEEEEcCCCccHHHHHHHHhhchhccCC
Confidence 01123333 3 6779888888888884 4566788888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhcccc
Q 002392 294 KIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIP 373 (928)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP 373 (928)
|-|-.++.+...+.++.++ ++++..-+..|.. .. -..+...+.+++.+||
T Consensus 213 PNEIAL~iLL~~LTliFL~-~~~Tl~p~a~y~~-------------g~----------------~~~i~~LiALlV~LIP 262 (681)
T COG2216 213 PNEIALTILLSGLTLIFLL-AVATLYPFAIYSG-------------GG----------------AASVTVLVALLVCLIP 262 (681)
T ss_pred hhHHHHHHHHHHHHHHHHH-HHHhhhhHHHHcC-------------CC----------------CcCHHHHHHHHHHHhc
Confidence 9998887776655433222 2221111111110 00 0135556777888999
Q ss_pred ceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcch
Q 002392 374 ISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMT 453 (928)
Q Consensus 374 ~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~ 453 (928)
-.+.-.++.+-..++-++ .+.+++.++..++|..|.||+++.|||||+|-|+-.-...+..+.
T Consensus 263 TTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g------- 325 (681)
T COG2216 263 TTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG------- 325 (681)
T ss_pred ccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC-------
Confidence 988887777777777776 788999999999999999999999999999988755443332111
Q ss_pred HHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCC
Q 002392 454 EVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVN 533 (928)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~ 533 (928)
...+++..+..+++-.
T Consensus 326 -----------------------------------------------------------v~~~~la~aa~lsSl~----- 341 (681)
T COG2216 326 -----------------------------------------------------------VSEEELADAAQLASLA----- 341 (681)
T ss_pred -----------------------------------------------------------CCHHHHHHHHHHhhhc-----
Confidence 1122455555544322
Q ss_pred CCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcE
Q 002392 534 EETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQL 613 (928)
Q Consensus 534 ~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~ 613 (928)
-+.|..+.+++.|++.|+....+. .-......||+.+.|..++-.. ++
T Consensus 342 ---------DeTpEGrSIV~LA~~~~~~~~~~~-------------------~~~~~~fvpFtA~TRmSGvd~~--~~-- 389 (681)
T COG2216 342 ---------DETPEGRSIVELAKKLGIELREDD-------------------LQSHAEFVPFTAQTRMSGVDLP--GG-- 389 (681)
T ss_pred ---------cCCCCcccHHHHHHHhccCCCccc-------------------ccccceeeecceecccccccCC--CC--
Confidence 247888999999999986543311 0002346799988776666543 33
Q ss_pred EEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 002392 614 LLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAE 693 (928)
Q Consensus 614 ~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~ 693 (928)
.-+-|||.+.|.......+...++.+....++-++.|-.+|+++
T Consensus 390 ~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~------------------------------------ 433 (681)
T COG2216 390 REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV------------------------------------ 433 (681)
T ss_pred ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE------------------------------------
Confidence 56779999999999887666688899999999999999999999
Q ss_pred HhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhc
Q 002392 694 KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG 773 (928)
Q Consensus 694 ~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~ 773 (928)
.|-.++|++.++|-+|+|.+|-+.+||+.|||.+|+|||++.||..||++.|+..
T Consensus 434 ---~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd---------------------- 488 (681)
T COG2216 434 ---ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------------- 488 (681)
T ss_pred ---ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh----------------------
Confidence 5788999999999999999999999999999999999999999999999999831
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHH
Q 002392 774 DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTR 853 (928)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~ 853 (928)
..+.++|++|..+++
T Consensus 489 -----------------------------------------------------------------fiAeatPEdK~~~I~ 503 (681)
T COG2216 489 -----------------------------------------------------------------FIAEATPEDKLALIR 503 (681)
T ss_pred -----------------------------------------------------------------hhhcCChHHHHHHHH
Confidence 567899999999999
Q ss_pred HHhcCCCEEEEEcCChhcHHHHHhCCeeEEe-cCCcchhhhhcCcEeecc
Q 002392 854 LVKGTGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 854 ~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam-~g~e~~~ak~aAD~vi~~ 902 (928)
.-|..|+.|+|+|||.||.|+|.+||||+|| +|+.. ||++++.|=+|
T Consensus 504 ~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMVDLD 551 (681)
T COG2216 504 QEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLD 551 (681)
T ss_pred HHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhhcccccC
Confidence 9999999999999999999999999999999 34444 99999998775
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=275.90 Aligned_cols=222 Identities=26% Similarity=0.375 Sum_probs=185.6
Q ss_pred HHHHHHHHHhHHHHHHHHHhhhhHHHh---cce-eEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCc
Q 002392 110 LIVVIGATMAKEGVEDWRRRKQDIEAN---NRK-VKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185 (928)
Q Consensus 110 l~~vl~i~~~~~~~~~~~r~~~~~~~n---~~~-~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G 185 (928)
++++++++.+.+.++++++++..+.++ +.+ ++|+| ||+++.++|++|+|||||+|++||.+||||+||+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r-~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIR-DGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEE-TTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SS
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEe-ccccccchHhhccceeeeecccccccccCcccee----cc
Confidence 677888888889999999999988875 344 89999 9999999999999999999999999999999998 37
Q ss_pred eEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecC
Q 002392 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (928)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t 265 (928)
.++||||+||||+.|+.|.|. +++..|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 799999999999999999862 466778899999999 8
Q ss_pred CeEEEEEEEecCcccee---ecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCC
Q 002392 266 DYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (928)
Q Consensus 266 ~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~ 342 (928)
||++++|++||.+|++. +....++.+++++++.++++..+++++.+++++++++++.++... ..|+
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---- 182 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSG-------ISFF---- 182 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTT-------CHCC----
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecccc-------cccc----
Confidence 89999999999999754 334456667899999999999999988888888877665543110 1232
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhh
Q 002392 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEE 416 (928)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~ 416 (928)
..+..++.+++.++|++|+++++++...++.++ .++++++|+++.+|.
T Consensus 183 ----------------~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 183 ----------------KSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ----------------HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ----------------cccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 278888999999999999999999999999998 889999999999984
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-21 Score=199.19 Aligned_cols=97 Identities=33% Similarity=0.514 Sum_probs=90.3
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..++..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999931
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEee--CcccH--HHHHH
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS--SPKQK--ALVTR 853 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~--~p~qK--~~iv~ 853 (928)
..+++++ +|++| ..+++
T Consensus 169 -----------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 169 -----------------------------------------------------------SIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp -----------------------------------------------------------EEEEESHETTTHHHHHHHHHH
T ss_pred -----------------------------------------------------------ccccccccccccchhHHHHHH
Confidence 2488999 99999 99999
Q ss_pred HHhcCCCEEEEEcCChhcHHHHHhCC
Q 002392 854 LVKGTGKTTLAIGDGANDVGMLQEAD 879 (928)
Q Consensus 854 ~l~~~g~~vlaiGDG~ND~~ml~~A~ 879 (928)
.++..+..|+|||||.||++|+++||
T Consensus 190 ~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99766669999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.4e-14 Score=124.20 Aligned_cols=90 Identities=29% Similarity=0.498 Sum_probs=70.6
Q ss_pred hhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCccee
Q 002392 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRM 602 (928)
Q Consensus 523 ~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 602 (928)
+|||++....++.....+ ..++|+|.||+.++...|..+.. ...+..|++++.+||+|+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999876554333322 45789999999999999654321 1235789999999999999999
Q ss_pred EEEEEcCCCcEEEEEecCchhhHHHhcc
Q 002392 603 SVMVRNPENQLLLLCKGADSVMFERLSK 630 (928)
Q Consensus 603 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 630 (928)
+||++ .++.+++|+||||+.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3446788999999999999974
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-13 Score=121.48 Aligned_cols=126 Identities=23% Similarity=0.356 Sum_probs=108.8
Q ss_pred ceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHH
Q 002392 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENI 778 (928)
Q Consensus 699 l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 778 (928)
+.+.+.++---+|=++++++|++|.+. ++++++|||...+....|+-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567889999999999999999999999 99999999999999999999997321
Q ss_pred HHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcC
Q 002392 779 TKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT 858 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~ 858 (928)
.+++...|+.|..+++.|++.
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk~ 92 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKKR 92 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcCC
Confidence 278888899999999999889
Q ss_pred CCEEEEEcCChhcHHHHHhCCeeEEecCCc--chhhhhcCcEeecccccchhhh
Q 002392 859 GKTTLAIGDGANDVGMLQEADIGVGISGVE--GMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 859 g~~vlaiGDG~ND~~ml~~A~vGIam~g~e--~~~ak~aAD~vi~~f~~l~~ll 910 (928)
++.|.|+|||+||+.||++||+||..-+.+ .+.+..+||+++-+-..+..++
T Consensus 93 ~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 93 YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 999999999999999999999999543322 2336689999999877766664
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.1e-11 Score=130.13 Aligned_cols=61 Identities=21% Similarity=0.325 Sum_probs=51.0
Q ss_pred EeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
...+|. .|+..++.+ +..| ..|++||||.||++||+.|++||||+|+... +|.+||+|..+
T Consensus 188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~vt~~ 254 (270)
T PRK10513 188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS-VKEVAQFVTKS 254 (270)
T ss_pred EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH-HHHhcCeeccC
Confidence 345554 799999998 6666 4699999999999999999999999876544 89999999874
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.2e-11 Score=127.87 Aligned_cols=193 Identities=20% Similarity=0.234 Sum_probs=107.1
Q ss_pred EEeeeccc-CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHH
Q 002392 703 GATAVEDK-LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKV 781 (928)
Q Consensus 703 G~~~ieD~-lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 781 (928)
|.+.-.+. +.+.++++|+++++.|++++++|||+...+..+.+++++.. .++..||...... .+......+...
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~--~~~i~~~~l~~~ 86 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNG--GELLFQKPLSRE 86 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecC--CcEEeeecCCHH
Confidence 44444555 89999999999999999999999999999999999999864 3444444432111 111122222222
Q ss_pred HHHHHHHHHHhhhh----hcccc----------cc-----------------ccce---EEEEEccchhhHHhHHHHHHH
Q 002392 782 SLESVTKQIREGIS----QVNSA----------KE-----------------SKVT---FGLVIDGKSLDFALDKKLEKM 827 (928)
Q Consensus 782 ~~~~~~~~~~~~~~----~~~~~----------~~-----------------~~~~---~~~vi~g~~l~~~~~~~~~~~ 827 (928)
....+......... ..... .. .... ..+......+..+ ...+.+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 165 (264)
T COG0561 87 DVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEEL-VEALRKR 165 (264)
T ss_pred HHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHH-HHHHhhh
Confidence 22222222211000 00000 00 0000 0000001111111 1111111
Q ss_pred HHHhh--ccCCceEEEeeCcc--cHHHHHHHH-hcCCC---EEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEe
Q 002392 828 FLDLA--IDCASVICCRSSPK--QKALVTRLV-KGTGK---TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899 (928)
Q Consensus 828 ~~~~~--~~~~~~i~~r~~p~--qK~~iv~~l-~~~g~---~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~v 899 (928)
+.... .......+....|. .|+..++.+ +..|. .|+||||+.||++||+.|+.||||+|+ .+.+|+.||++
T Consensus 166 ~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~v 244 (264)
T COG0561 166 FPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYV 244 (264)
T ss_pred ccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcc
Confidence 11000 00000011334443 799999999 66664 499999999999999999999999887 44499999977
Q ss_pred ecc
Q 002392 900 IAQ 902 (928)
Q Consensus 900 i~~ 902 (928)
...
T Consensus 245 t~~ 247 (264)
T COG0561 245 TTS 247 (264)
T ss_pred cCC
Confidence 553
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.3e-10 Score=123.44 Aligned_cols=61 Identities=21% Similarity=0.263 Sum_probs=50.1
Q ss_pred EEeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcE--eec
Q 002392 840 CCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY--AIA 901 (928)
Q Consensus 840 ~~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~--vi~ 901 (928)
+...+|. .|+..++.+ +..| ..|++||||.||++||+.|+.||||+|+... +|.+||+ ++.
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~-vK~~A~~~~v~~ 247 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQ-LRAELPHLPVIG 247 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHH-HHHhCCCCeecC
Confidence 3455555 699999999 6666 4699999999999999999999999776544 8999997 554
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.6e-10 Score=120.69 Aligned_cols=62 Identities=27% Similarity=0.288 Sum_probs=50.4
Q ss_pred EEeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCc--Eeecc
Q 002392 840 CCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--YAIAQ 902 (928)
Q Consensus 840 ~~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD--~vi~~ 902 (928)
+....|. .|+..++.+ +..| ..|+|||||.||++||+.|++||||+|+... +|+.|| +|+..
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~~~v~~~ 250 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR-LKDLLPELEVIGS 250 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH-HHHhCCCCeeccc
Confidence 3455554 699999998 6666 4599999999999999999999999877554 899988 66653
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-10 Score=132.75 Aligned_cols=61 Identities=30% Similarity=0.393 Sum_probs=50.8
Q ss_pred EeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..+.|. .|+..++.+ +..| ..|+|||||.||++||+.|++||||+|+... +|++||+|..+
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee-VK~~Ad~VT~s 565 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK-TKAVADVIGVS 565 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH-HHHhCCEEeCC
Confidence 344444 799999999 6666 4699999999999999999999999777544 89999999864
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.07 E-value=9.8e-10 Score=115.01 Aligned_cols=187 Identities=15% Similarity=0.129 Sum_probs=98.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+.+.++|++|+++||+++++|||+...+..+++.+|+.. ..+..+|.......-........+...........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 477899999999999999999999999999999999998532 23333333110000000000000000000000000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCc--ccHHHHHHHH-hcCC---CEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP--KQKALVTRLV-KGTG---KTTL 863 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~l-~~~g---~~vl 863 (928)
....................+......... . .+.+.+......+....+....| ..|...++.+ +..| ..++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i 169 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTV-R-EIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETL 169 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHH-H-HHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 000000000000000111111111111111 1 11111110000001112334444 3799999888 5555 4699
Q ss_pred EEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 864 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 864 aiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+|||+.||++|++.|++||+|+|+... +|..||+|...
T Consensus 170 ~~GD~~NDi~m~~~ag~~vam~Na~~~-~k~~A~~vt~~ 207 (225)
T TIGR01482 170 VCGDSENDIDLFEVPGFGVAVANAQPE-LKEWADYVTES 207 (225)
T ss_pred EECCCHhhHHHHHhcCceEEcCChhHH-HHHhcCeecCC
Confidence 999999999999999999999876543 89999999864
|
catalyze the same reaction as SPP. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1e-09 Score=115.34 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=100.2
Q ss_pred ccc-CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHH
Q 002392 708 EDK-LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 786 (928)
Q Consensus 708 eD~-lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (928)
.|+ +.+.+.++|++|+++|++++++|||+...+..+++.+|+.. .++..+|.........+......+.. ...+
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~--~~~~ 91 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIEE--CEKA 91 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchHH--HHHH
Confidence 444 78899999999999999999999999999999999998742 23333333110000000000001100 0011
Q ss_pred HHHHHhhhh----hccccccccceEEEEE-ccchhhHHhHHHHHHHHHHhh---ccCCceEEEeeCcc--cHHHHHHHH-
Q 002392 787 TKQIREGIS----QVNSAKESKVTFGLVI-DGKSLDFALDKKLEKMFLDLA---IDCASVICCRSSPK--QKALVTRLV- 855 (928)
Q Consensus 787 ~~~~~~~~~----~~~~~~~~~~~~~~vi-~g~~l~~~~~~~~~~~~~~~~---~~~~~~i~~r~~p~--qK~~iv~~l- 855 (928)
...+..... .+...........+.+ ..... +.....+.... .......+....|. .|+..++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~ 166 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLA 166 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHH
Confidence 111100000 0000000000011111 11111 11112121111 00011123455554 499999888
Q ss_pred hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 856 KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 856 ~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+..| ..+++|||+.||++|++.|++||+|+|+... +|++||++..+
T Consensus 167 ~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~-vk~~a~~v~~~ 215 (230)
T PRK01158 167 ELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE-LKEAADYVTEK 215 (230)
T ss_pred HHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHH-HHHhcceEecC
Confidence 5555 4599999999999999999999999776543 89999999874
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.6e-09 Score=113.68 Aligned_cols=188 Identities=19% Similarity=0.176 Sum_probs=104.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
..+.+.+.++|++|+++|++++++|||.+..+..+..++++. ...+..+|...+ ..-.+......+.......+..
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~-~~~~~~l~~~~i~~~~~~~i~~ 89 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALID-DPKGKILYEKPIDSDDVKKILK 89 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEE-ETTTEEEEEESB-HHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceee-ecccccchhhheeccchhheee
Confidence 447789999999999999999999999999999999999875 223333333210 0000000011111111111111
Q ss_pred HHHhhhhhcc---------c---------------------------cccccceEEEEEccchhhHHhHHHHHHHHHHhh
Q 002392 789 QIREGISQVN---------S---------------------------AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 832 (928)
Q Consensus 789 ~~~~~~~~~~---------~---------------------------~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~ 832 (928)
.+......+. . ......+.. +.....-...+.+.+.+.+....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~-~~~~~~~~~~l~~~l~~~~~~~~ 168 (254)
T PF08282_consen 90 YLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKIL-FFPDPEDLEQLREELKKKFPNLI 168 (254)
T ss_dssp HHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEE-EESCHHHHHHHHHHHHHHHTTTE
T ss_pred hhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeee-ccccchhhhhhhhhhccccCcce
Confidence 1111000000 0 000011112 11111111122334444443221
Q ss_pred -ccCCceEEEeeCc--ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 833 -IDCASVICCRSSP--KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 833 -~~~~~~i~~r~~p--~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
......-+..++| -.|+..++.+ +..| ..+++|||+.||++||+.|+.||+|+++... ++..||+++..
T Consensus 169 ~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~ 244 (254)
T PF08282_consen 169 DVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPS 244 (254)
T ss_dssp EEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESS
T ss_pred eEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecC
Confidence 0000111333444 4799999998 5555 5799999999999999999999999877544 89999999885
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.1e-09 Score=110.32 Aligned_cols=178 Identities=15% Similarity=0.168 Sum_probs=98.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchh----hHhhhhcchhHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM----EALEKQGDKENITKVSLES 785 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~ 785 (928)
++.+.+.++|++|+++|++++++|||+...+..+++.+++.. ..+..||.-... ..+.... ...+..... .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~-~~~~~~~~~-~ 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANME-EEWFLDEEK-K 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEeccc-chhhHHHhh-h
Confidence 488999999999999999999999999999999999988642 233333321110 0000000 000000000 0
Q ss_pred HHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCc--ccHHHHHHHH-hcCC---
Q 002392 786 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP--KQKALVTRLV-KGTG--- 859 (928)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~l-~~~g--- 859 (928)
. .. ......... ......+..+......+ ...+... .+.... ...+..++| ..|+..++.+ +..|
T Consensus 93 ~--~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~l~~~--~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~ 163 (215)
T TIGR01487 93 K--RF--PRDRLSNEY-PRASLVIMREGKDVDEV-REIIKER--GLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKP 163 (215)
T ss_pred h--hh--hhhhccccc-ceeEEEEecCCccHHHH-HHHHHhC--CeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCH
Confidence 0 00 000000000 01112222233222211 1111110 010000 011233333 4899999988 5555
Q ss_pred CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..+++|||+.||++|++.|++||+|+++... ++..||++...
T Consensus 164 ~~~i~iGDs~ND~~ml~~ag~~vam~na~~~-~k~~A~~v~~~ 205 (215)
T TIGR01487 164 EEVAAIGDSENDIDLFRVVGFKVAVANADDQ-LKEIADYVTSN 205 (215)
T ss_pred HHEEEECCCHHHHHHHHhCCCeEEcCCccHH-HHHhCCEEcCC
Confidence 3599999999999999999999999776543 89999999863
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.3e-09 Score=112.91 Aligned_cols=56 Identities=27% Similarity=0.424 Sum_probs=47.0
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++. ..++..||+++.+
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~-~~lk~~Ad~v~~~ 257 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNAD-DAVKARADLVIGD 257 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCch-HHHHHhCCEEEec
Confidence 3699888877 6655 45999999999999999999999997664 4478999999874
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.94 E-value=8.1e-09 Score=111.10 Aligned_cols=39 Identities=10% Similarity=0.130 Sum_probs=36.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
+-+.++++|++|+++||+++++|||+...+..+++++|+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 457799999999999999999999999999999999997
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.9e-08 Score=100.59 Aligned_cols=121 Identities=24% Similarity=0.240 Sum_probs=89.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.++.|++.+.++.++++|.+||++||-...-+..+|+.+|+...-...+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999996443332222110
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCCC---EEEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGK---TTLA 864 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g~---~vla 864 (928)
.++|. ++.-.+..+.|...++.+ ...|. .+.|
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 12221 122334456798888777 55554 5999
Q ss_pred EcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeec
Q 002392 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA 901 (928)
Q Consensus 865 iGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~ 901 (928)
+|||.||+|||+.||.+|++..... ....|+..+.
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~~~~ 200 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK--LRALADVRIW 200 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHHhcC
Confidence 9999999999999999999966544 3444444333
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.9e-08 Score=107.36 Aligned_cols=40 Identities=18% Similarity=0.111 Sum_probs=36.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.-+.+.++|++|+++|++++++|||+...+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4457999999999999999999999999999999999863
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.6e-08 Score=108.47 Aligned_cols=132 Identities=24% Similarity=0.235 Sum_probs=92.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.+.|+.|++.|++++++||.....+..+.+++|+..--...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 48899999999999999999999999988888888888884211101111000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlai 865 (928)
.++|.... .+ +....|..+++.+ ++.| ..|+||
T Consensus 234 --------------------~ltg~v~g--------------------~i---v~~k~K~~~L~~la~~lgi~~~qtIaV 270 (322)
T PRK11133 234 --------------------KLTGNVLG--------------------DI---VDAQYKADTLTRLAQEYEIPLAQTVAI 270 (322)
T ss_pred --------------------EEEeEecC--------------------cc---CCcccHHHHHHHHHHHcCCChhhEEEE
Confidence 00110000 01 2235788888888 5555 579999
Q ss_pred cCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhhhhhhc
Q 002392 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHG 914 (928)
Q Consensus 866 GDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~lll~~G 914 (928)
|||.||++|++.||+|||+...+. .++.||+++. ...|..+|...|
T Consensus 271 GDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l~~~~ 316 (322)
T PRK11133 271 GDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVLCILS 316 (322)
T ss_pred ECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHHHHhc
Confidence 999999999999999999943433 8899999996 455555544444
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.5e-08 Score=108.18 Aligned_cols=61 Identities=26% Similarity=0.456 Sum_probs=49.9
Q ss_pred EeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
....|. .|+..++.+ +..| ..+++|||+.||++|++.|++|++|+++.. .++..||+++..
T Consensus 180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~-~~k~~a~~~~~~ 246 (256)
T TIGR00099 180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADE-ELKALADYVTDS 246 (256)
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchH-HHHHhCCEEecC
Confidence 345554 699999998 5554 469999999999999999999999976643 389999999874
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.5e-08 Score=99.71 Aligned_cols=113 Identities=20% Similarity=0.142 Sum_probs=83.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.+.|+.+++.| ++.|+||-....+..+++.+|+..--.....+....
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 47999999999999975 999999999999999999999842111000000000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
.++|. .. ..+..|..+++.++..+..++++|||.
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~~~~~~v~vGDs~ 154 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKSLYYRVIAAGDSY 154 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHhhCCCEEEEeCCH
Confidence 01110 11 346689999999977777899999999
Q ss_pred hcHHHHHhCCeeEEecCCcchhhhhcCc
Q 002392 870 NDVGMLQEADIGVGISGVEGMQAVMSSD 897 (928)
Q Consensus 870 ND~~ml~~A~vGIam~g~e~~~ak~aAD 897 (928)
||++|++.||+||++..++. .+++||
T Consensus 155 nDl~ml~~Ag~~ia~~ak~~--~~~~~~ 180 (203)
T TIGR02137 155 NDTTMLSEAHAGILFHAPEN--VIREFP 180 (203)
T ss_pred HHHHHHHhCCCCEEecCCHH--HHHhCC
Confidence 99999999999999987776 444443
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.1e-07 Score=98.96 Aligned_cols=42 Identities=14% Similarity=0.058 Sum_probs=38.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
..+.+++.++|++|+++|++++++|||+...+..+++++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 456778999999999999999999999999999999999975
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.5e-07 Score=97.19 Aligned_cols=183 Identities=13% Similarity=0.132 Sum_probs=96.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhH--hhhhcchhHHHHHH-HH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA--LEKQGDKENITKVS-LE 784 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~-~~ 784 (928)
..++.+.+.++|++++++|++++++|||....+..+.+++++..+. ..+.-+|....... .........+.... ..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3557799999999999999999999999999999999989876543 22333333111000 00000000000000 01
Q ss_pred HHHHHHHhhhhhcccc---ccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE----EEeeCc--ccHHHHHHHH
Q 002392 785 SVTKQIREGISQVNSA---KESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI----CCRSSP--KQKALVTRLV 855 (928)
Q Consensus 785 ~~~~~~~~~~~~~~~~---~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i----~~r~~p--~qK~~iv~~l 855 (928)
.+.. +......+... .....+..+.......... ...+.+.+......+..++ +....| ..|...++.+
T Consensus 98 ~~~~-~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l 175 (249)
T TIGR01485 98 IVVA-ITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYL 175 (249)
T ss_pred HHHH-HHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHH
Confidence 1111 11111111110 1112233333332221111 1222333322111111111 223444 3799999988
Q ss_pred -hcCC---CEEEEEcCChhcHHHHHh-CCeeEEecCCcchhhhh
Q 002392 856 -KGTG---KTTLAIGDGANDVGMLQE-ADIGVGISGVEGMQAVM 894 (928)
Q Consensus 856 -~~~g---~~vlaiGDG~ND~~ml~~-A~vGIam~g~e~~~ak~ 894 (928)
+..| ..|+++||+.||++|++. ++.||+|+|+... ++.
T Consensus 176 ~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~-~k~ 218 (249)
T TIGR01485 176 LQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEE-LLQ 218 (249)
T ss_pred HHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHH-HHH
Confidence 5554 569999999999999998 6799999876543 454
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.9e-07 Score=96.01 Aligned_cols=180 Identities=16% Similarity=0.166 Sum_probs=92.8
Q ss_pred HHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchh-hHhhhhcc-hhHHHHH-HHHHHHHHHHh
Q 002392 716 PECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM-EALEKQGD-KENITKV-SLESVTKQIRE 792 (928)
Q Consensus 716 ~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~-~~~~~~~~-~~~~~~~-~~~~~~~~~~~ 792 (928)
.++++ ++++||+++++|||+...+..+...+++..+. .++..+|..... ........ ...+... ....+...+..
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALAD 98 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhc
Confidence 36666 69999999999999999999999999874322 333434432100 00000000 0000000 00111111110
Q ss_pred hhhhcccccc---ccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE----EEeeCcc--cHHHHHHHH-hcCC---
Q 002392 793 GISQVNSAKE---SKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI----CCRSSPK--QKALVTRLV-KGTG--- 859 (928)
Q Consensus 793 ~~~~~~~~~~---~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i----~~r~~p~--qK~~iv~~l-~~~g--- 859 (928)
...+..... ...+..+....+.... + .+....+......+..+. +....|. .|...++.+ ++.|
T Consensus 99 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~ 175 (236)
T TIGR02471 99 -IPGLTLQDDQEQGPFKISYLLDPEGEPI-L-PQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPL 175 (236)
T ss_pred -CCCcEeCChhcCCCeeEEEEECcccchH-H-HHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 000100011 1122333333321111 1 112222222111111111 1134443 799999998 6555
Q ss_pred CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCc----Eeec
Q 002392 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD----YAIA 901 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD----~vi~ 901 (928)
..+++|||+.||++|++.|++||+|+++... ++..|| ++..
T Consensus 176 ~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~~~~~~v~~ 220 (236)
T TIGR02471 176 EQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRHQQRIYFAN 220 (236)
T ss_pred HHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhcCCcEEEcC
Confidence 3589999999999999999999999876554 888999 6544
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.9e-07 Score=90.34 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=74.0
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhh
Q 002392 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (928)
Q Consensus 717 ~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.+|+.|+++|+++.|+|+.+...+..+.+.+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999841
Q ss_pred ccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcH
Q 002392 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (928)
Q Consensus 797 ~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~ 872 (928)
++.... .|...+..+ +..+ ..+++|||+.||+
T Consensus 76 ------------------------------------------~f~~~k--pkp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 76 ------------------------------------------FHEGIK--KKTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred ------------------------------------------EEecCC--CCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 111111 222333333 3333 4699999999999
Q ss_pred HHHHhCCeeEEecCCcchhhhhcCcEeec
Q 002392 873 GMLQEADIGVGISGVEGMQAVMSSDYAIA 901 (928)
Q Consensus 873 ~ml~~A~vGIam~g~e~~~ak~aAD~vi~ 901 (928)
+|++.|+++++|+++... ++..|++|..
T Consensus 112 ~~~~~ag~~~am~nA~~~-lk~~A~~I~~ 139 (169)
T TIGR02726 112 SMMKRVGLAVAVGDAVAD-VKEAAAYVTT 139 (169)
T ss_pred HHHHHCCCeEECcCchHH-HHHhCCEEcC
Confidence 999999999999877643 8999999886
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.7e-07 Score=94.95 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=38.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+..-+++.++|++|+++|++++++|||+...+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999973
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.2e-07 Score=93.90 Aligned_cols=122 Identities=22% Similarity=0.313 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++++.|+.|++.|+++.|+||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999999984311000000000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEe-eCcccHHHHHHHH-hcCC---CEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 864 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~l-~~~g---~~vla 864 (928)
.++| .+... ..+..|..+++.+ ++.+ ..+++
T Consensus 138 --------------------~~~~------------------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTG------------------------LVEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEE------------------------EecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 0000 00001 1123366666655 4443 35899
Q ss_pred EcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc
Q 002392 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (928)
Q Consensus 865 iGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~ 904 (928)
|||+.+|+.|.+.||++|++.+.+. ++.+||++|.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999977654 7789999998643
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-06 Score=91.35 Aligned_cols=48 Identities=19% Similarity=0.123 Sum_probs=39.6
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCC
Q 002392 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLD 762 (928)
Q Consensus 713 ~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~ 762 (928)
+.++++|++|+++||+++++|||+...+..+.+.+|+.. ...+..||.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--~~~I~~NGa 66 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--DPYIAENGA 66 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CcEEEeCCc
Confidence 348999999999999999999999999999999999741 234555544
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.5e-07 Score=86.81 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=73.3
Q ss_pred HHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhc
Q 002392 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (928)
Q Consensus 718 aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
+|+.|++.|+++.|+||++...+..+.+.+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 9999999999999999999999999999999831
Q ss_pred cccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcHH
Q 002392 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVG 873 (928)
Q Consensus 798 ~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ 873 (928)
.+.. ...|...+..+ ++.| ..+++|||+.||++
T Consensus 70 -----------------------------------------~~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 70 -----------------------------------------LYQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred -----------------------------------------EEec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 0000 01344444444 3333 56999999999999
Q ss_pred HHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 874 ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
|++.|+++++|.+.... .+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~~~-~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHPL-LIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCHH-HHHhCCEEecC
Confidence 99999999999766433 78889999973
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=2e-06 Score=91.89 Aligned_cols=184 Identities=9% Similarity=0.075 Sum_probs=94.8
Q ss_pred cCCCChHHHHHHHHH-cCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~-aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.+-+++.++|++|++ .|++++++|||+...+..+...+++. ++..+|.... ..........+.......+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~-----~i~~nGa~i~--~~~~~~~~~~l~~~~~~~i~~ 108 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFP-----LAGVHGAERR--DINGKTHIVHLPDAIARDISV 108 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccce-----EEEeCCCeee--cCCCCeeeccCChhHHHHHHH
Confidence 456889999999998 79999999999999998887766531 2222222100 000000001111111111222
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhH--HhHHHHHHHHHHhhc---cCCceEEEeeCc--ccHHHHHHHH-hcCC-
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDF--ALDKKLEKMFLDLAI---DCASVICCRSSP--KQKALVTRLV-KGTG- 859 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~--~~~~~~~~~~~~~~~---~~~~~i~~r~~p--~qK~~iv~~l-~~~g- 859 (928)
.+...........-......++........ .....+.+.+..... .....-+..+.| ..|+..++.+ +..|
T Consensus 109 ~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~ 188 (266)
T PRK10187 109 QLHTALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPF 188 (266)
T ss_pred HHHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCC
Confidence 221111000011001111222222221111 000112222211110 001112334444 3899999888 5554
Q ss_pred --CEEEEEcCChhcHHHHHhC----CeeEEecCCcchhhhhcCcEeeccccc
Q 002392 860 --KTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQFRF 905 (928)
Q Consensus 860 --~~vlaiGDG~ND~~ml~~A----~vGIam~g~e~~~ak~aAD~vi~~f~~ 905 (928)
..++++||+.||.+||+.+ ++||+|+++. ..|++.+.+-..
T Consensus 189 ~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~~~~~ 235 (266)
T PRK10187 189 AGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLAGVPD 235 (266)
T ss_pred CCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCCCHHH
Confidence 5799999999999999999 9999996554 358888887443
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.7e-07 Score=89.05 Aligned_cols=112 Identities=19% Similarity=0.215 Sum_probs=81.9
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhh
Q 002392 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (928)
Q Consensus 717 ~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.+|+.|+++|+++.++||++...+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999999731
Q ss_pred ccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcH
Q 002392 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (928)
Q Consensus 797 ~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~ 872 (928)
++. ....|...++.+ +..| ..|++|||+.||+
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 010 112344444444 4444 4699999999999
Q ss_pred HHHHhCCeeEEecCCcchhhhhcCcEeec------ccccchhhh-hhhchhhh
Q 002392 873 GMLQEADIGVGISGVEGMQAVMSSDYAIA------QFRFLERLL-LVHGHWCY 918 (928)
Q Consensus 873 ~ml~~A~vGIam~g~e~~~ak~aAD~vi~------~f~~l~~ll-l~~Gr~~~ 918 (928)
+|++.|++++++++.+. .++..||+++. ..+.+..+| ..-|+|-+
T Consensus 126 ~~a~~aG~~~~v~~~~~-~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~~ 177 (183)
T PRK09484 126 PVMEKVGLSVAVADAHP-LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLDE 177 (183)
T ss_pred HHHHHCCCeEecCChhH-HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChhh
Confidence 99999999999864433 36788999996 345566553 34555533
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.9e-06 Score=95.04 Aligned_cols=181 Identities=18% Similarity=0.159 Sum_probs=94.3
Q ss_pred CCCChHHHH-HHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchh-hHhhh-hcchhHHHHHH-HHHH
Q 002392 711 LQKGVPECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM-EALEK-QGDKENITKVS-LESV 786 (928)
Q Consensus 711 lr~~~~~aI-~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~-~~~~~-~~~~~~~~~~~-~~~~ 786 (928)
+.+....++ +++++.|+.++++|||.+..+..+.++.++..+.. ++..+|..... ..... ..-...+.... ...+
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~-~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDI-TIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCE-EEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 333345556 88999999999999999999999999999877652 22223321100 00000 00000000000 0101
Q ss_pred HHHHHhhhhhcc--c-cccccceEEEEEccchhhHHhHHHHHHHHHHhhccCC----ceEEEeeCcc--cHHHHHHHH-h
Q 002392 787 TKQIREGISQVN--S-AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCA----SVICCRSSPK--QKALVTRLV-K 856 (928)
Q Consensus 787 ~~~~~~~~~~~~--~-~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~----~~i~~r~~p~--qK~~iv~~l-~ 856 (928)
...+.. ...+. . ......+..+..+......+ ...+.+.+......+. ..-+..+.|. .|+..++.+ +
T Consensus 108 ~~~~~~-~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~ 185 (413)
T PLN02382 108 VEETSK-FPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLK 185 (413)
T ss_pred HHHHhc-CCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHH
Confidence 111110 00010 0 11122233444433222221 2233333322111111 0123455554 699999999 5
Q ss_pred cC---C---CEEEEEcCChhcHHHHHhCC-eeEEecCCcchhhhhc
Q 002392 857 GT---G---KTTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVMS 895 (928)
Q Consensus 857 ~~---g---~~vlaiGDG~ND~~ml~~A~-vGIam~g~e~~~ak~a 895 (928)
.. | ..|++|||+.||++||+.|+ .||+|+|+... +++.
T Consensus 186 ~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 186 KLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred HhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 54 3 47999999999999999999 69999876543 5553
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.8e-06 Score=96.72 Aligned_cols=39 Identities=5% Similarity=-0.019 Sum_probs=35.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
.-+.+.++|++|+++||+++++|||....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 445789999999999999999999999999999999986
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.3e-06 Score=92.61 Aligned_cols=54 Identities=24% Similarity=0.332 Sum_probs=40.3
Q ss_pred eeCcc--cHHHHHHHHhcCCCEEEEEcC----ChhcHHHHHhC-CeeEEecCCcchhhhhcC
Q 002392 842 RSSPK--QKALVTRLVKGTGKTTLAIGD----GANDVGMLQEA-DIGVGISGVEGMQAVMSS 896 (928)
Q Consensus 842 r~~p~--qK~~iv~~l~~~g~~vlaiGD----G~ND~~ml~~A-~vGIam~g~e~~~ak~aA 896 (928)
.+.|. .|+..++.+.+....|+|||| |.||++||+.| -.|++++|++.. +|..+
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~-~~~~~ 241 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDT-IKILK 241 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHH-HHHHH
Confidence 44443 799999999333678999999 99999999976 567777676553 45444
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.28 E-value=5e-06 Score=85.47 Aligned_cols=48 Identities=23% Similarity=0.351 Sum_probs=38.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcC--CcccCceEE
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS--LLRQEMKQI 757 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~g--i~~~~~~~~ 757 (928)
++.+.+.++|++|++.|++++++|||....+..+.+.++ ++..++..+
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 477899999999999999999999999999999888743 344444433
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=6e-06 Score=84.96 Aligned_cols=125 Identities=22% Similarity=0.221 Sum_probs=87.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++++.++.|+++ +++.++||.....+..+.+.+|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3579999999999999 9999999999999999999999842111111110000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEe-eCcccHHHHHHHHhcCCCEEEEEcCC
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLVKGTGKTTLAIGDG 868 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~l~~~g~~vlaiGDG 868 (928)
.+ +... ..|..|..+++.++..+..++|||||
T Consensus 121 --------------------~i---------------------------~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs 153 (205)
T PRK13582 121 --------------------MI---------------------------TGYDLRQPDGKRQAVKALKSLGYRVIAAGDS 153 (205)
T ss_pred --------------------eE---------------------------ECccccccchHHHHHHHHHHhCCeEEEEeCC
Confidence 00 0001 13567878888776667889999999
Q ss_pred hhcHHHHHhCCeeEEecCCcchhhhhcCcE-eecccccchhh
Q 002392 869 ANDVGMLQEADIGVGISGVEGMQAVMSSDY-AIAQFRFLERL 909 (928)
Q Consensus 869 ~ND~~ml~~A~vGIam~g~e~~~ak~aAD~-vi~~f~~l~~l 909 (928)
.||+.|.+.|++|+.....+.. ....+++ ++.+++.|..+
T Consensus 154 ~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 154 YNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 9999999999999987554432 2334565 77777766555
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.2e-05 Score=84.31 Aligned_cols=42 Identities=7% Similarity=-0.030 Sum_probs=38.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
+..-+.+.++|++|+++||.++++||+....+..+.+++++-
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 346677999999999999999999999999999999999974
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.22 E-value=9.1e-06 Score=83.25 Aligned_cols=117 Identities=20% Similarity=0.235 Sum_probs=79.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.+.|+.|++.|+++.++||.....+..+++.+|+..--...+......
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999999732111111110000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlai 865 (928)
... ...+..+.|..|..+++.+ +..| ..+++|
T Consensus 134 --------------------~~~------------------------p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQ------------------------PDGIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEe------------------------cceeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 000 0012234456787777766 4433 459999
Q ss_pred cCChhcHHHHHhCCeeEEecCCcchhhhhcCc
Q 002392 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 897 (928)
Q Consensus 866 GDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD 897 (928)
||+.||++|++.||+++++.+... ..+.++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999944322 2444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.4e-06 Score=83.36 Aligned_cols=129 Identities=23% Similarity=0.343 Sum_probs=87.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCce--EEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK--QIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
.+-+++++.++.|++.|++|.++||--...+..+|.++||...+.. .+.++..
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~------------------------- 142 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKD------------------------- 142 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccC-------------------------
Confidence 3679999999999999999999999999999999999999643211 1111100
Q ss_pred HHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc--CCCEEEEE
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG--TGKTTLAI 865 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~--~g~~vlai 865 (928)
|+-+.. . .--.-+...-|++++..+++ .-+.++||
T Consensus 143 -------------------------Gk~~gf----------d--------~~~ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 143 -------------------------GKYLGF----------D--------TNEPTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred -------------------------Cccccc----------c--------cCCccccCCccHHHHHHHHhCCChheeEEe
Confidence 100000 0 00001122369999999943 23679999
Q ss_pred cCChhcHHHHHhCCeeEEecCCcc-hhhhhcCcEeecccccc
Q 002392 866 GDGANDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFL 906 (928)
Q Consensus 866 GDG~ND~~ml~~A~vGIam~g~e~-~~ak~aAD~vi~~f~~l 906 (928)
|||+||++|+..|+.=||..|.-. .+.+..|++-+.+|..|
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHHHH
Confidence 999999999999888777765432 22567777777766544
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.7e-05 Score=80.55 Aligned_cols=39 Identities=26% Similarity=0.259 Sum_probs=36.2
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 713 ~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
+++++.|+.++++|++++|+||.....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 666699999999999999999999999999999999964
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.9e-06 Score=76.65 Aligned_cols=108 Identities=18% Similarity=0.278 Sum_probs=82.6
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhh
Q 002392 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (928)
Q Consensus 717 ~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
-.|+.+.++||++.|+|||+-.-+..=|+++||-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 58999999999999999999999999999999831
Q ss_pred ccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcH
Q 002392 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (928)
Q Consensus 797 ~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~ 872 (928)
+..| -.+|....+.+ ++.+ ..|+++||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0111 12455555555 4443 4599999999999
Q ss_pred HHHHhCCeeEEecCCcchhhhhcCcEeecc------cccchhhhhhhch
Q 002392 873 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGH 915 (928)
Q Consensus 873 ~ml~~A~vGIam~g~e~~~ak~aAD~vi~~------f~~l~~lll~~Gr 915 (928)
|+|+..+.+++..++... .+..||||... ++.+..+ +..++
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~~GG~GAvREv~dl-il~aq 159 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSKKGGEGAVREVCDL-ILQAQ 159 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhccCcchHHHHHHHH-HHHcc
Confidence 999999999999777654 78899999883 6666666 44443
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.1e-05 Score=79.91 Aligned_cols=41 Identities=22% Similarity=0.444 Sum_probs=38.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++++.|++.|+++.|+||.....+..+++.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999984
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.4e-05 Score=77.32 Aligned_cols=140 Identities=12% Similarity=0.118 Sum_probs=86.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-+++|++.+.++.|++.|+++.|+||.....+..+.+.++... .++...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~n~---------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYCNE---------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEece----------------------------
Confidence 4689999999999999999999999999888888887764321 111000
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE-EE-eeCcccHHHHHHHHhcCCCEEEEEc
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-CC-RSSPKQKALVTRLVKGTGKTTLAIG 866 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i-~~-r~~p~qK~~iv~~l~~~g~~vlaiG 866 (928)
+.++|..+... ....... +. .+ ...|..+++.++.....++|||
T Consensus 118 --------------------~~~~~~~~~~~-------------~p~~~~~~~~~~c-g~~K~~~l~~~~~~~~~~i~iG 163 (214)
T TIGR03333 118 --------------------ADFSNEYIHID-------------WPHPCDGTCQNQC-GCCKPSLIRKLSEPNDYHIVIG 163 (214)
T ss_pred --------------------eEeeCCeeEEe-------------CCCCCccccccCC-CCCHHHHHHHHhhcCCcEEEEe
Confidence 01111110000 0000000 00 11 3469999998865667789999
Q ss_pred CChhcHHHHHhCCeeEEecCC-cchhhhhcCcEeecccccchhhhhhh
Q 002392 867 DGANDVGMLQEADIGVGISGV-EGMQAVMSSDYAIAQFRFLERLLLVH 913 (928)
Q Consensus 867 DG~ND~~ml~~A~vGIam~g~-e~~~ak~aAD~vi~~f~~l~~lll~~ 913 (928)
||.||+.|.+.||++++-... +-.+-...+.+.+.+|..+...|-.|
T Consensus 164 Dg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~ 211 (214)
T TIGR03333 164 DSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELENV 211 (214)
T ss_pred CCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHH
Confidence 999999999999998775321 11112233455555677766664433
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00018 Score=88.31 Aligned_cols=186 Identities=15% Similarity=0.115 Sum_probs=95.3
Q ss_pred CCCChHHHHHHHHH-cCCeEEEEcCCcHhhHHHHHHHcC--CcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 711 LQKGVPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACS--LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 711 lr~~~~~aI~~l~~-aGIkv~ilTGD~~~ta~~ia~~~g--i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
+.+++.++|++|.+ .|+.|+++|||............+ ++..++..+...+.. +................+.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~-----w~~~~~~~~~w~~~v~~il 589 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGE-----WQLLEPVATEWKDAVRPIL 589 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCc-----eEECCCcchhHHHHHHHHH
Confidence 56789999999999 699999999999998877765444 333333333221111 0000000000011111111
Q ss_pred HHHHhhhhhccccccccceEEEEEccch----hhHHhHHHHHHHHHHhhccCCceE-----EEeeCc--ccHHHHHHHH-
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKS----LDFALDKKLEKMFLDLAIDCASVI-----CCRSSP--KQKALVTRLV- 855 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~----l~~~~~~~~~~~~~~~~~~~~~~i-----~~r~~p--~qK~~iv~~l- 855 (928)
..... .............+...-.. +......++...+..........+ +..+.| -+|+..++.+
T Consensus 590 ~~~~~---~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll 666 (726)
T PRK14501 590 EEFVD---RTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666 (726)
T ss_pred HHHHh---cCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHH
Confidence 11111 01111111111223332111 111111223333333221111111 223334 4899999998
Q ss_pred hcC-CCEEEEEcCChhcHHHHHhC---CeeEEecCCcchhhhhcCcEeecccccchhh
Q 002392 856 KGT-GKTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 856 ~~~-g~~vlaiGDG~ND~~ml~~A---~vGIam~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
+.. ...++++||+.||.+||+.+ +.+|+|++. +.+|+|.+.+-..+..+
T Consensus 667 ~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~-----~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 667 EAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG-----ESRARYRLPSQREVREL 719 (726)
T ss_pred hcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC-----CCcceEeCCCHHHHHHH
Confidence 422 25799999999999999997 578888553 45799999875544433
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.83 E-value=5.7e-05 Score=77.45 Aligned_cols=110 Identities=12% Similarity=0.050 Sum_probs=76.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45689999999999999999999999999999999999999842100000000000
Q ss_pred HHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEE
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTL 863 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vl 863 (928)
.++|... --.+.++.|...++.+ +..+ ..++
T Consensus 141 ----------------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 1111100 0012345677777666 4444 3689
Q ss_pred EEcCChhcHHHHHhCCeeEEecC
Q 002392 864 AIGDGANDVGMLQEADIGVGISG 886 (928)
Q Consensus 864 aiGDG~ND~~ml~~A~vGIam~g 886 (928)
++||+.+|++|++.|+.++++..
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCC
Confidence 99999999999999999999854
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.79 E-value=6.8e-05 Score=70.99 Aligned_cols=44 Identities=25% Similarity=0.279 Sum_probs=40.2
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-..++.+++.+.|+.|++.|++++++||+....+...++.+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999999874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00012 Score=73.23 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=37.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
+++++.+.++.+++.|++++++||.....+..++..+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00023 Score=73.95 Aligned_cols=135 Identities=13% Similarity=0.123 Sum_probs=82.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
+++||+.+.++.|++.|+++.|+||-....+..+.+.+ +.. ..++....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~---------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGS---------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEE----------------------------
Confidence 68999999999999999999999999998888888887 532 11111100
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEE--eeCcccHHHHHHHHhcCCCEEEEEcC
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC--RSSPKQKALVTRLVKGTGKTTLAIGD 867 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~--r~~p~qK~~iv~~l~~~g~~vlaiGD 867 (928)
.++|+.+... ........+ ++ ...|..+++.++.....+++|||
T Consensus 123 --------------------~~~~~~~~~~-------------kp~p~~~~~~~~~-~~~K~~~l~~~~~~~~~~i~iGD 168 (219)
T PRK09552 123 --------------------DFSGEYITIT-------------WPHPCDEHCQNHC-GCCKPSLIRKLSDTNDFHIVIGD 168 (219)
T ss_pred --------------------EecCCeeEEe-------------ccCCccccccccC-CCchHHHHHHhccCCCCEEEEeC
Confidence 0111100000 000000000 01 12478888888555668999999
Q ss_pred ChhcHHHHHhCCeeEEecCC-cchhhhhcCcEeecccccchhh
Q 002392 868 GANDVGMLQEADIGVGISGV-EGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 868 G~ND~~ml~~A~vGIam~g~-e~~~ak~aAD~vi~~f~~l~~l 909 (928)
|.||+.|.+.||+.++-... +..+....+.+.+.+|..+...
T Consensus 169 s~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 169 SITDLEAAKQADKVFARDFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred CHHHHHHHHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHH
Confidence 99999999999997773210 1100122355555666665554
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00099 Score=73.63 Aligned_cols=232 Identities=15% Similarity=0.185 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHh---------hcCceEEEEeeeccc----CCCChHHHHHHHHHcCCeE
Q 002392 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKI---------ERDLILLGATAVEDK----LQKGVPECIDKLAQAGIKV 729 (928)
Q Consensus 663 ~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~i---------E~~l~llG~~~ieD~----lr~~~~~aI~~l~~aGIkv 729 (928)
+++|..|..++..|...+ +.+...- .-|.+|.-++ .|| +-+++.++++.|.+. ..|
T Consensus 91 ~~~~~~~~~~~p~al~~~--------~~~~~~~~~k~~~LfLDyDGTLaPIv--~~Pd~A~~s~~~~~aL~~La~~-~~V 159 (384)
T PLN02580 91 DFAYRTWMLKYPSALTSF--------EQIANFAKGKKIALFLDYDGTLSPIV--DDPDRALMSDAMRSAVKNVAKY-FPT 159 (384)
T ss_pred hHHHHHHHHhCcHHHHHH--------HHHHHHhhcCCeEEEEecCCccCCCC--CCcccccCCHHHHHHHHHHhhC-CCE
Confidence 567889999888777655 1111111 1233333322 233 457889999999887 489
Q ss_pred EEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCC--chhhHhh-------hhcch----hH-HH-HHHHHHHHHHHHhhh
Q 002392 730 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDS--PDMEALE-------KQGDK----EN-IT-KVSLESVTKQIREGI 794 (928)
Q Consensus 730 ~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~--~~~~~~~-------~~~~~----~~-~~-~~~~~~~~~~~~~~~ 794 (928)
+|+|||..........-.++.--+.+...+.+.. .....+. .+... +. .. ......+...+....
T Consensus 160 AIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~ 239 (384)
T PLN02580 160 AIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVEST 239 (384)
T ss_pred EEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHh
Confidence 9999999999877764444321111111111100 0000000 00000 00 00 000112222222212
Q ss_pred hhccccccccceEEEEEccchhhHHhH----HHHHHHHHHhh----ccCCceEEEeeCc---ccHHHHHHHH-hcCC---
Q 002392 795 SQVNSAKESKVTFGLVIDGKSLDFALD----KKLEKMFLDLA----IDCASVICCRSSP---KQKALVTRLV-KGTG--- 859 (928)
Q Consensus 795 ~~~~~~~~~~~~~~~vi~g~~l~~~~~----~~~~~~~~~~~----~~~~~~i~~r~~p---~qK~~iv~~l-~~~g--- 859 (928)
.......-....+++.+.-........ ..+........ ...+. +..+.| .+|+..++.+ +..|
T Consensus 240 ~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~--vlEVrP~~g~~KG~Av~~Ll~~~g~~~ 317 (384)
T PLN02580 240 KDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRK--VLEVRPVIDWNKGKAVEFLLESLGLSN 317 (384)
T ss_pred ccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCe--EEEEecCCCCCHHHHHHHHHHhcCCCc
Confidence 222222223344555555433322211 12222221111 11122 234455 4999999988 5554
Q ss_pred --C-EEEEEcCChhcHHHHHh-----CCeeEEecCCcchhhhhcCcEeecccccchhhh
Q 002392 860 --K-TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 860 --~-~vlaiGDG~ND~~ml~~-----A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
. .+++|||+.||..||+. +++||+|++... .-.|+|.|.+-..+..+|
T Consensus 318 ~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV~~~L 373 (384)
T PLN02580 318 CDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEVMEFL 373 (384)
T ss_pred ccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHHHHHH
Confidence 1 25999999999999996 589999975432 236889998866655553
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00024 Score=71.81 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=38.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999998888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00024 Score=74.27 Aligned_cols=123 Identities=25% Similarity=0.276 Sum_probs=81.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.++++.|++.|++++++||.....+..+.+..|+...-..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 138 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--------------------------------- 138 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE---------------------------------
Confidence 46889999999999999999999999999999899988887422110
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcc--cHHHHHHHHhcCCCEEEEEc
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPK--QKALVTRLVKGTGKTTLAIG 866 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~--qK~~iv~~l~~~g~~vlaiG 866 (928)
++.++. + ....|. --..+.+.+......+++||
T Consensus 139 ---------------------~~~~~~-----------------------~-~~~kp~~~~~~~~~~~~~~~~~~~i~ig 173 (226)
T PRK13222 139 ---------------------VIGGDS-----------------------L-PNKKPDPAPLLLACEKLGLDPEEMLFVG 173 (226)
T ss_pred ---------------------EEcCCC-----------------------C-CCCCcChHHHHHHHHHcCCChhheEEEC
Confidence 000000 0 011121 11122222322335799999
Q ss_pred CChhcHHHHHhCCe-eEEec-CC--cchhhhhcCcEeecccccchhh
Q 002392 867 DGANDVGMLQEADI-GVGIS-GV--EGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 867 DG~ND~~ml~~A~v-GIam~-g~--e~~~ak~aAD~vi~~f~~l~~l 909 (928)
|+.+|+.|.+.||+ +|++. |. ........+++++.++..|...
T Consensus 174 D~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 174 DSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred CCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 99999999999999 66663 21 1111345689999888887766
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00032 Score=72.88 Aligned_cols=126 Identities=23% Similarity=0.165 Sum_probs=85.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
+..+-+++++++..|+++|++..++|+++...+..+.+..|+...-..++. +.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g--~~------------------------- 139 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG--GD------------------------- 139 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc--CC-------------------------
Confidence 567889999999999999999999999999999999999998543211111 00
Q ss_pred HHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcC
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 867 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGD 867 (928)
. .......|.....+.+.+......++||||
T Consensus 140 ---------------------------~----------------------~~~~KP~P~~l~~~~~~~~~~~~~~l~VGD 170 (220)
T COG0546 140 ---------------------------D----------------------VPPPKPDPEPLLLLLEKLGLDPEEALMVGD 170 (220)
T ss_pred ---------------------------C----------------------CCCCCcCHHHHHHHHHHhCCChhheEEECC
Confidence 0 000112233333344444222247999999
Q ss_pred ChhcHHHHHhCC---eeEEecCC-cchhhhhcCcEeecccccchhh
Q 002392 868 GANDVGMLQEAD---IGVGISGV-EGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 868 G~ND~~ml~~A~---vGIam~g~-e~~~ak~aAD~vi~~f~~l~~l 909 (928)
..+|+.|=+.|| |||..+.. ........+|+++.++..|...
T Consensus 171 s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 171 SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 999999999999 44544322 2222456699999998877665
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00026 Score=72.72 Aligned_cols=41 Identities=29% Similarity=0.362 Sum_probs=37.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++|+.|+++|+++.++||.....+..+.+..|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 68899999999999999999999999988888888888874
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00038 Score=73.56 Aligned_cols=167 Identities=16% Similarity=0.160 Sum_probs=81.5
Q ss_pred HHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhh-Hh-hhhcchhHHHH-HHHHHHHHHHHhhhhhcc
Q 002392 722 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDME-AL-EKQGDKENITK-VSLESVTKQIREGISQVN 798 (928)
Q Consensus 722 l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 798 (928)
..+.++.++++|||+...+..+.++.++..++ .++.-.|...... .. ....-...+.. ...+.+..-+........
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd-~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~ 109 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPD-YIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGLRP 109 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S-EEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCC-EEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCccc
Confidence 44778999999999999999999999986543 2222222211110 00 00000011111 011111111111111011
Q ss_pred ccc--cccceEEEEEccchhhHHhHHHHHHHHHHhhccCCce----EEEeeCc--ccHHHHHHHH-hcCC---CEEEEEc
Q 002392 799 SAK--ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV----ICCRSSP--KQKALVTRLV-KGTG---KTTLAIG 866 (928)
Q Consensus 799 ~~~--~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~----i~~r~~p--~qK~~iv~~l-~~~g---~~vlaiG 866 (928)
... ....+.+..++.......+ +++...+......++.+ -+..+-| ..|...++.+ ++.+ ..|+++|
T Consensus 110 q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aG 188 (247)
T PF05116_consen 110 QPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAG 188 (247)
T ss_dssp GGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEE
T ss_pred CCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEe
Confidence 111 1123444555554443322 23333333322222211 1233334 4899999999 5444 4689999
Q ss_pred CChhcHHHHHhCCeeEEecCCcch
Q 002392 867 DGANDVGMLQEADIGVGISGVEGM 890 (928)
Q Consensus 867 DG~ND~~ml~~A~vGIam~g~e~~ 890 (928)
|+.||.+||..++-||.++|+...
T Consensus 189 DSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 189 DSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp SSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCCCcHHHHcCcCCEEEEcCCCHH
Confidence 999999999999999999887653
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00046 Score=72.84 Aligned_cols=49 Identities=18% Similarity=0.335 Sum_probs=39.2
Q ss_pred EEeeCcc--cHHHHHHHHhcCCCEEEEEcC----ChhcHHHHHh-CCeeEEecCCcc
Q 002392 840 CCRSSPK--QKALVTRLVKGTGKTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 889 (928)
Q Consensus 840 ~~r~~p~--qK~~iv~~l~~~g~~vlaiGD----G~ND~~ml~~-A~vGIam~g~e~ 889 (928)
+..+.|. +|+..++.+. ....|+|||| |.||++||+. -=.|+.+++.+.
T Consensus 180 ~iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 3444443 7999999998 6678999999 8999999997 455889877644
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00061 Score=73.22 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=36.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
.++.+++.++|+.|+++|++++|+||.+...+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46889999999999999999999999988888888777776
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0018 Score=68.41 Aligned_cols=67 Identities=9% Similarity=0.043 Sum_probs=50.2
Q ss_pred EEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhC--------CeeEEecCCcchhhhhcCcEeecccccch
Q 002392 840 CCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 840 ~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A--------~vGIam~g~e~~~ak~aAD~vi~~f~~l~ 907 (928)
-.+..+.+|...++.+ +..+ ..++++||+.||..|++.+ +.||.|...+ .+..|++++.+...+.
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~---~~~~A~~~~~~~~~v~ 236 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS---KKTVAKFHLTGPQQVL 236 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC---cCCCceEeCCCHHHHH
Confidence 3345556899999888 5544 4799999999999999999 4777774112 4667999999877665
Q ss_pred hh
Q 002392 908 RL 909 (928)
Q Consensus 908 ~l 909 (928)
.+
T Consensus 237 ~~ 238 (244)
T TIGR00685 237 EF 238 (244)
T ss_pred HH
Confidence 55
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0007 Score=69.97 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 58899999999999999999999999988899998888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0069 Score=74.72 Aligned_cols=201 Identities=13% Similarity=0.109 Sum_probs=99.6
Q ss_pred CceEEEEeeecccCCCChHHHHHHH-HHcCCeEEEEcCCcHhhHHHHHHH---cCCcccCceEEEEcCCCchhhHhhhhc
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKL-AQAGIKVWVLTGDKMETAINIGYA---CSLLRQEMKQIVITLDSPDMEALEKQG 773 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l-~~aGIkv~ilTGD~~~ta~~ia~~---~gi~~~~~~~~~i~~~~~~~~~~~~~~ 773 (928)
|.||+-.....-.+-+++.+++++| ++.|+.|+++|||...+....... ++++.+++..+...+...... .. .
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~-~~--~ 680 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWET-CV--P 680 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeee-cc--h
Confidence 4445433222234567899999997 788999999999999998877644 345555554443332211100 00 0
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHh----HHHHHHHHHHhhccC-------CceEEEe
Q 002392 774 DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL----DKKLEKMFLDLAIDC-------ASVICCR 842 (928)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~----~~~~~~~~~~~~~~~-------~~~i~~r 842 (928)
..+.........+.... ....+...-......++.+-...+.-. ..++..++....... +.++=.+
T Consensus 681 ~~~~~w~~~v~~i~~~y---~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~ 757 (854)
T PLN02205 681 VADCSWKQIAEPVMQLY---TETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVK 757 (854)
T ss_pred hhhHHHHHHHHHHHHHH---hcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEE
Confidence 00000010111111110 000111111222344444432221110 112222222221111 1112222
Q ss_pred eCcccHHHHHHHH-hc---CC---CEEEEEcCChhcHHHHHhCC--------------eeEEecCCcchhhhhcCcEeec
Q 002392 843 SSPKQKALVTRLV-KG---TG---KTTLAIGDGANDVGMLQEAD--------------IGVGISGVEGMQAVMSSDYAIA 901 (928)
Q Consensus 843 ~~p~qK~~iv~~l-~~---~g---~~vlaiGDG~ND~~ml~~A~--------------vGIam~g~e~~~ak~aAD~vi~ 901 (928)
..--.|+..++.+ +. .| ..+++|||+.||..||+.++ ++|.++.. .-.|.|-+.
T Consensus 758 p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~-----~S~A~y~L~ 832 (854)
T PLN02205 758 PQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK-----PSKAKYYLD 832 (854)
T ss_pred eCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC-----CccCeEecC
Confidence 3334799999888 22 23 37999999999999999986 44555332 235678777
Q ss_pred ccccchhh
Q 002392 902 QFRFLERL 909 (928)
Q Consensus 902 ~f~~l~~l 909 (928)
+-..+..+
T Consensus 833 d~~eV~~l 840 (854)
T PLN02205 833 DTAEIVRL 840 (854)
T ss_pred CHHHHHHH
Confidence 76655555
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0057 Score=67.09 Aligned_cols=230 Identities=14% Similarity=0.099 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHh---------hcCceEEEEeeecc--cCCCChHHHHHHHHHcCCeEEE
Q 002392 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKI---------ERDLILLGATAVED--KLQKGVPECIDKLAQAGIKVWV 731 (928)
Q Consensus 663 ~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~i---------E~~l~llG~~~ieD--~lr~~~~~aI~~l~~aGIkv~i 731 (928)
.+++..|..++..|...+ +.+.... .-|.+|+-++.-.| .+-+++.++|++|. .|+++++
T Consensus 83 ~~~~~~w~~~~psal~~~--------~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaI 153 (366)
T PLN03017 83 QQQLNSWIMQHPSALEMF--------EQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAI 153 (366)
T ss_pred hhhhhHHHhhCChHHHHH--------HHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEE
Confidence 456777877776555443 2222211 12444443333333 37789999999999 7899999
Q ss_pred EcCCcHhhHHHHHHHcCCcccCceEEEEcCCCch-----hhHhhhhc--c-hhHH--HHHHHHHHHHHHHhhhhhccccc
Q 002392 732 LTGDKMETAINIGYACSLLRQEMKQIVITLDSPD-----MEALEKQG--D-KENI--TKVSLESVTKQIREGISQVNSAK 801 (928)
Q Consensus 732 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~-----~~~~~~~~--~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 801 (928)
+|||....+..+. ++ .+..++..+|.... ........ . .+.. .......+...+...........
T Consensus 154 vSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~ 228 (366)
T PLN03017 154 VTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAK 228 (366)
T ss_pred EeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCE
Confidence 9999999988773 22 11222232332100 00000000 0 0000 00111222222222222222222
Q ss_pred cccceEEEEEccchhhHHhHHHHHHHHHHhhc--------cCCceEEEeeC-cccHHHHHHHH-hcCC------CEEEEE
Q 002392 802 ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI--------DCASVICCRSS-PKQKALVTRLV-KGTG------KTTLAI 865 (928)
Q Consensus 802 ~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~--------~~~~~i~~r~~-p~qK~~iv~~l-~~~g------~~vlai 865 (928)
-....+++.+.-.......-.++...+..... ..+.++=.|.. ..+|+..++.+ +..+ ..++++
T Consensus 229 VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyi 308 (366)
T PLN03017 229 VENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYI 308 (366)
T ss_pred EEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEe
Confidence 23344555555443332211122222222211 12223323332 34999999988 5443 368999
Q ss_pred cCChhcHHHHHhC-----CeeEEecCCcchhhhhcCcEeecccccchhh
Q 002392 866 GDGANDVGMLQEA-----DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 866 GDG~ND~~ml~~A-----~vGIam~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
||...|-.|++.. ++||.++.... .-.|+|.|.+-..+..+
T Consensus 309 GDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~eV~~f 354 (366)
T PLN03017 309 GDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPSEVMDF 354 (366)
T ss_pred CCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHHHHHHH
Confidence 9999999999876 35555542222 24689999876555444
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0014 Score=75.48 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=38.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
++++++.+.|++++++|++++++|+-+...+..+++.+|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999997
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0013 Score=68.81 Aligned_cols=41 Identities=22% Similarity=0.077 Sum_probs=36.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888777777777773
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0012 Score=68.38 Aligned_cols=41 Identities=20% Similarity=0.052 Sum_probs=37.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37899999999999999999999999998888888888884
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0022 Score=68.72 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=38.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++++.|+++|+++.|+|+.....+..+.+.+|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999999984
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0018 Score=68.86 Aligned_cols=121 Identities=12% Similarity=0.180 Sum_probs=81.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.++|+.|+++|+++.|+|+.....+..+.+.+|+...-..+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~i--------------------------------- 155 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVV--------------------------------- 155 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEE---------------------------------
Confidence 56899999999999999999999999999998888888874321111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCC---CEEEEEc
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTG---KTTLAIG 866 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g---~~vlaiG 866 (928)
+.+... .+..|. -..+...+++.| ..+++||
T Consensus 156 ---------------------i~~~d~------------------------~~~KP~-Pe~~~~a~~~l~~~p~~~l~Ig 189 (260)
T PLN03243 156 ---------------------LAAEDV------------------------YRGKPD-PEMFMYAAERLGFIPERCIVFG 189 (260)
T ss_pred ---------------------EecccC------------------------CCCCCC-HHHHHHHHHHhCCChHHeEEEc
Confidence 111100 001121 112222233333 4699999
Q ss_pred CChhcHHHHHhCCeeE-EecCCcchhhhhcCcEeecccccchhh
Q 002392 867 DGANDVGMLQEADIGV-GISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 867 DG~ND~~ml~~A~vGI-am~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
|..+|+.+=+.||+-+ ++.|.........+|+++.+++.|...
T Consensus 190 Ds~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 190 NSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred CCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 9999999999999954 665443222334589999988776555
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0034 Score=64.51 Aligned_cols=108 Identities=15% Similarity=0.135 Sum_probs=73.6
Q ss_pred cCCCChHHHHH-HHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 710 KLQKGVPECID-KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 710 ~lr~~~~~aI~-~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.+.|++.++|+ .+++.|++++|+|+-....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57899999996 788899999999999999999999986664321 12211100
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCCCEEEEEcC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 867 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g~~vlaiGD 867 (928)
+.+|.. +.-..|-.+.|..-++.. ........|-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 011124455777766544 322345679999
Q ss_pred ChhcHHHHHhCCeeEEecCC
Q 002392 868 GANDVGMLQEADIGVGISGV 887 (928)
Q Consensus 868 G~ND~~ml~~A~vGIam~g~ 887 (928)
+.||.|||+.||.+++++..
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred CcccHHHHHhCCCcEEECcc
Confidence 99999999999999999544
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.002 Score=67.13 Aligned_cols=42 Identities=17% Similarity=0.180 Sum_probs=38.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++-|++.++|+.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 467899999999999999999999999988888888888874
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0032 Score=64.93 Aligned_cols=109 Identities=14% Similarity=0.101 Sum_probs=75.2
Q ss_pred cCCCChHHHH-HHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 710 KLQKGVPECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 710 ~lr~~~~~aI-~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.+.|++.+.| +.+++.|++++++|+-...-+..++..+|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999988632 1122221100
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCCCEEEEEcC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 867 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g~~vlaiGD 867 (928)
...+|.. ....|..+.|..-++.. ........|-||
T Consensus 148 --------------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 0111111 11124456777766644 333346689999
Q ss_pred ChhcHHHHHhCCeeEEecCCc
Q 002392 868 GANDVGMLQEADIGVGISGVE 888 (928)
Q Consensus 868 G~ND~~ml~~A~vGIam~g~e 888 (928)
+.||+|||+.|+.+++++...
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred CcccHHHHHhCCCCEEECccH
Confidence 999999999999999996543
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.00084 Score=54.50 Aligned_cols=46 Identities=17% Similarity=0.104 Sum_probs=39.1
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFS 96 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~ 96 (928)
.++|+.+||.|.+..++.+.++ +.+++||.+|+.++++++++++++
T Consensus 16 v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 16 AARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4577889999999988744443 889999999999999999999886
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0049 Score=65.12 Aligned_cols=46 Identities=20% Similarity=0.292 Sum_probs=41.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCce
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK 755 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~ 755 (928)
+++||+.+.++.|++.|+++.++||-....+..+.+++|+..++..
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~ 166 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK 166 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce
Confidence 4799999999999999999999999999999999999998655433
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0066 Score=62.98 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
++.||+.++|+.|+++|+++.++|+.....+...-+..|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555555665
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0043 Score=64.44 Aligned_cols=42 Identities=26% Similarity=0.200 Sum_probs=38.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.++.+|+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999988888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0068 Score=67.22 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=38.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+.+|+.+.++.|+++|+++.++|+.....+..+-+..||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47799999999999999999999999999999999988884
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0072 Score=58.89 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=31.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~ 741 (928)
+|.+.+++++++++++++|++++++|||+...+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999998874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.037 Score=60.63 Aligned_cols=234 Identities=16% Similarity=0.135 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHHHHHHHHhh---------cCceEEEEeeeccc--CCCChHHHHHHHHHcCCeEEEE
Q 002392 664 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIE---------RDLILLGATAVEDK--LQKGVPECIDKLAQAGIKVWVL 732 (928)
Q Consensus 664 ~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE---------~~l~llG~~~ieD~--lr~~~~~aI~~l~~aGIkv~il 732 (928)
++|..|..++..|...+ +....... -|.+|+-+.---|. +-+++.++|+.|. ++..++++
T Consensus 71 ~~~~~w~~~~p~a~~~~--------~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIv 141 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF--------EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIV 141 (354)
T ss_pred hhHHHHHHhCChHHHHH--------HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEE
Confidence 57888998887776544 22222222 13333322222233 5678899999999 56899999
Q ss_pred cCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhc---chhH-H-HHHHHHHHHHHHHhhhhhccccccccceE
Q 002392 733 TGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG---DKEN-I-TKVSLESVTKQIREGISQVNSAKESKVTF 807 (928)
Q Consensus 733 TGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~---~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (928)
|||.......+..-.++.--+.+-..+.+.... ..+.... .... . .......+...+.......+...-....+
T Consensus 142 SGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g-~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~ 220 (354)
T PLN02151 142 SGRCREKVSSFVKLTELYYAGSHGMDIKGPEQG-SKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKF 220 (354)
T ss_pred ECCCHHHHHHHcCCccceEEEeCCceeecCCCC-ccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCc
Confidence 999999887776433321111111111111000 0000000 0000 0 00111122222221111222222233345
Q ss_pred EEEEccchhhHHhHHHHHHHHHHhhc--------cCCceEEEeeC-cccHHHHHHHH-hcCC------CEEEEEcCChhc
Q 002392 808 GLVIDGKSLDFALDKKLEKMFLDLAI--------DCASVICCRSS-PKQKALVTRLV-KGTG------KTTLAIGDGAND 871 (928)
Q Consensus 808 ~~vi~g~~l~~~~~~~~~~~~~~~~~--------~~~~~i~~r~~-p~qK~~iv~~l-~~~g------~~vlaiGDG~ND 871 (928)
++.+.-.........++...+..+.. ..+.++=.|.. ..+|+..++.+ +..+ ..++++||-..|
T Consensus 221 slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TD 300 (354)
T PLN02151 221 CASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTD 300 (354)
T ss_pred EEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcH
Confidence 55555433322110112222222211 12233333432 34999999988 5433 258999999999
Q ss_pred HHHHHhC-----CeeEEecCCcchhhhhcCcEeecccccchhhh
Q 002392 872 VGMLQEA-----DIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 872 ~~ml~~A-----~vGIam~g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
-.|++.. |+||-++.... .-.|+|.|.+-..+..+|
T Consensus 301 EDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~dp~eV~~~L 341 (354)
T PLN02151 301 EDAFKILRDKKQGLGILVSKYAK---ETNASYSLQEPDEVMEFL 341 (354)
T ss_pred HHHHHHHhhcCCCccEEeccCCC---CCcceEeCCCHHHHHHHH
Confidence 9999864 56665542111 236899999866655553
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0074 Score=64.21 Aligned_cols=41 Identities=29% Similarity=0.218 Sum_probs=37.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.||+.+.|+.|+++|+++.++||.....+..+.+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999999888888888875
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.00079 Score=55.56 Aligned_cols=44 Identities=23% Similarity=0.279 Sum_probs=37.0
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVS 94 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~ 94 (928)
.++|+.+||.|.+...+...++ +.+++||.+|+++++++++++|
T Consensus 26 v~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 26 VEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 3577889999999766655544 8999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.013 Score=58.33 Aligned_cols=41 Identities=24% Similarity=0.256 Sum_probs=31.9
Q ss_pred cCceEEEEeeecc----cCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 697 RDLILLGATAVED----KLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 697 ~~l~llG~~~ieD----~lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
.|.++.|-..+.+ ++.|+++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4556655544443 2689999999999999999999998753
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.012 Score=58.32 Aligned_cols=55 Identities=27% Similarity=0.357 Sum_probs=42.5
Q ss_pred ccHHHHHHHH-hcC--CCEEEEEcCChhcHHHHHhC----CeeEEecCCcchhhhhcCcEeecc
Q 002392 846 KQKALVTRLV-KGT--GKTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 846 ~qK~~iv~~l-~~~--g~~vlaiGDG~ND~~ml~~A----~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..|+++++.+ ... ..-.+++||+..|+.||+++ ++.|+.+|++- |..-||..+..
T Consensus 190 g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 190 GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 4677777777 222 23479999999999999998 35567788887 88899998885
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.014 Score=61.85 Aligned_cols=41 Identities=20% Similarity=0.074 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++++.|++.|+++.|+|+-....+..+.+.+|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999999998888884
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0078 Score=62.64 Aligned_cols=40 Identities=13% Similarity=0.163 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCC----cHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGD----KMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD----~~~ta~~ia~~~gi~ 750 (928)
+.+++++.++.++++|+++.++|++ ...++..+.+.+|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 4455999999999999999999999 667888998889984
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.014 Score=63.27 Aligned_cols=38 Identities=29% Similarity=0.296 Sum_probs=32.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
++.|++.+.++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877776655444
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.017 Score=60.09 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=34.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc----HhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDK----METAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~----~~ta~~ia~~~gi 749 (928)
.+.+++++.|+.+++.|+++.++|||. ..++..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 467889999999999999999999985 4578888887888
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.015 Score=62.32 Aligned_cols=41 Identities=27% Similarity=0.152 Sum_probs=35.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++-||+.++|+.|++.|+++.++||.....+..+.+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999988877777766653
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.017 Score=58.84 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=38.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+++.++++++++.|++.|+++.|+||.+...+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4556778899999999999999999999999999999999984
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.021 Score=66.42 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=38.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.||+.+.|+.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999998888884
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.019 Score=59.54 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=36.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++|+.|+++|++++++|+-....+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888777777777773
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.016 Score=63.45 Aligned_cols=44 Identities=20% Similarity=0.097 Sum_probs=40.6
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
..+++.+++.++|+.|++.|++++++||++...+..+.+.+|+.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999998888874
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.036 Score=52.33 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=35.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCc--------HhhHHHHHHHcCC
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDK--------METAINIGYACSL 749 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~--------~~ta~~ia~~~gi 749 (928)
-++.+++.++++.|+++|++++++|+.. ...+..+.+.+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3578999999999999999999999998 6667777777776
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.028 Score=63.38 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHH-HcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY-ACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~-~~gi 749 (928)
++.+++.+.++.|++.|+++.|+|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998877766554 4565
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.052 Score=54.41 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=35.4
Q ss_pred CEEEEEcCChhcHHHHHhCCeeE-Ee-cCCcch-hhhhcC--cEeecccccchhh
Q 002392 860 KTTLAIGDGANDVGMLQEADIGV-GI-SGVEGM-QAVMSS--DYAIAQFRFLERL 909 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGI-am-~g~e~~-~ak~aA--D~vi~~f~~l~~l 909 (928)
..+++|||+.+|+.+-+.||+.+ ++ .|.... .....+ |+++.++..+..+
T Consensus 121 ~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 121 AGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred hhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 56999999999999999999854 44 222111 122335 8999888777766
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.06 Score=56.01 Aligned_cols=41 Identities=15% Similarity=0.069 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.+.++.|+++|+++.++|+-+...+.......|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998888777777777764
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.05 Score=55.41 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=36.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++|+.|+++|++++++|+-+...+..+.+.+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999998888888888888873
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.067 Score=55.62 Aligned_cols=40 Identities=18% Similarity=0.073 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+ +|+++.++|......+...-+..|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 46899999999999 68999999998877777777777763
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.19 Score=53.47 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=37.6
Q ss_pred EEeeeccc----CCCChHHHHHHHHHcCCeEEEEcCCcHhh---HHHHHHHcCCc
Q 002392 703 GATAVEDK----LQKGVPECIDKLAQAGIKVWVLTGDKMET---AINIGYACSLL 750 (928)
Q Consensus 703 G~~~ieD~----lr~~~~~aI~~l~~aGIkv~ilTGD~~~t---a~~ia~~~gi~ 750 (928)
|++.-.+. +-|++.++|++|+++|++++++||++..+ ......++|+-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 88899999999999999999999988776 44445566763
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.035 Score=54.80 Aligned_cols=44 Identities=18% Similarity=0.188 Sum_probs=40.0
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-..++.+++.+.++.|++.|++++++|+.....+....+.+|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 34578999999999999999999999999999999999999985
|
... |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.044 Score=55.00 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=30.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
++.|++.++|+.|+++|+++.++|+... +..+.+.+|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997542 3455666666
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.077 Score=55.09 Aligned_cols=40 Identities=23% Similarity=0.318 Sum_probs=35.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++|+.|++. ++++++|+-....+..+.+.+|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.048 Score=54.75 Aligned_cols=40 Identities=20% Similarity=0.244 Sum_probs=33.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++.|++.++|+.|+++|+++.++|+. ..+..+.+.+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 368999999999999999999999987 5566667777763
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.14 Score=50.70 Aligned_cols=53 Identities=21% Similarity=0.184 Sum_probs=43.9
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCC-cHhhHHHHHHHcCCc
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACSLL 750 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD-~~~ta~~ia~~~gi~ 750 (928)
+.......+-+-++.+++.++++.|+++|+++.++|+- ....+..+...+|+.
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 34455566666778999999999999999999999976 888888888888874
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.081 Score=54.91 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=34.0
Q ss_pred CEEEEEcCChhcHHHHHhCCeeE-Eec-CCcchhhhhcCcEeecccccch
Q 002392 860 KTTLAIGDGANDVGMLQEADIGV-GIS-GVEGMQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGI-am~-g~e~~~ak~aAD~vi~~f~~l~ 907 (928)
..+++|||+..|+.+-+.||+-. ++. +.........+|+++.++..+.
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 56999999999999999999965 552 2222112346888888776543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.093 Score=52.41 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|++.|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 578999999999999999999999988776 5554457763
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.2 Score=53.06 Aligned_cols=43 Identities=9% Similarity=0.169 Sum_probs=32.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhH---HHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA---INIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta---~~ia~~~gi~ 750 (928)
..++-|++.+.++.|++.|+++.++|++..... ....+..|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 345779999999999999999999999985443 3444556663
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.2 Score=49.84 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=33.7
Q ss_pred CEEEEEcCChhcHHHHHhCCeeE--Ee-cCCcc-hhhhhcCcEeecccccch
Q 002392 860 KTTLAIGDGANDVGMLQEADIGV--GI-SGVEG-MQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGI--am-~g~e~-~~ak~aAD~vi~~f~~l~ 907 (928)
..++||||...|+.+=+.||+.. ++ .|... ......+|+++.++..|.
T Consensus 124 ~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 124 AQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred hhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 56899999999999999999953 44 34321 112235899998776553
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.68 Score=46.20 Aligned_cols=37 Identities=11% Similarity=0.160 Sum_probs=33.4
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 714 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 714 ~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+...+.+|+++|+.|+.+|.-........-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999998889999999865
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.15 Score=49.51 Aligned_cols=40 Identities=18% Similarity=0.348 Sum_probs=33.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
+....+++.+.++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3445689999999999999999999999988877766554
|
HAD subfamilies caused by an overly broad single model. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.23 Score=52.03 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=33.4
Q ss_pred CceEEEeeCcccHHHHHHHH-hcCC------CEEEEEcCChhcHHHHHhC------CeeEEecCCcchhhhhcCcEeecc
Q 002392 836 ASVICCRSSPKQKALVTRLV-KGTG------KTTLAIGDGANDVGMLQEA------DIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 836 ~~~i~~r~~p~qK~~iv~~l-~~~g------~~vlaiGDG~ND~~ml~~A------~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+.++-.|..-..|+.+++.+ +..+ ..++++||...|-.|++.. +++|-++..+.....-+|+|-+.+
T Consensus 154 ~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 154 KKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 44555666555799999988 5554 3799999999999999985 445555443322234566665543
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.24 Score=51.05 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=27.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
+.-+++.++++.|++.|++|+++|||....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 567899999999999999999999999755
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.24 Score=49.03 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=33.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc-HhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDK-METAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~-~~ta~~ia~~~gi 749 (928)
.+-+++.++++.|++.|++++++|+.+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 5556666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.26 Score=47.50 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=24.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDK 736 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~ 736 (928)
++.+++.++++.|++.|+++.|+|...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.098 Score=50.49 Aligned_cols=43 Identities=19% Similarity=0.023 Sum_probs=37.3
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
..-+++|++.+.++.|+ .++++.|+|.-....+..+.+.+++.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34468999999999999 57999999999999999988888763
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.22 Score=50.85 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=31.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
++-|++.++++.|+++|+++.|+|+-... +....+.+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57899999999999999999999986543 4555666666
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.27 Score=47.54 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=32.9
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEe
Q 002392 846 KQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI 884 (928)
Q Consensus 846 ~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam 884 (928)
.+|..+++.+.+....+.++|||.-|+++-+.+|+=.|-
T Consensus 146 ~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 146 HDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 379999999977778899999999999988877776553
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.32 Score=45.57 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=33.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC-cHhhHHHHHHHcC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACS 748 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD-~~~ta~~ia~~~g 748 (928)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6766666655554
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.43 E-value=0.37 Score=47.16 Aligned_cols=26 Identities=35% Similarity=0.517 Sum_probs=23.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGD 735 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD 735 (928)
++-+++.++|+.|+++|+++.++|--
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 36699999999999999999999974
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.22 Score=51.62 Aligned_cols=39 Identities=8% Similarity=0.092 Sum_probs=31.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++.+++.++|+.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 34668999999998 4999999998887777777777764
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.96 Score=57.96 Aligned_cols=41 Identities=22% Similarity=0.041 Sum_probs=36.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+.+|+.+.++.|+++|++++|+|+-....+..+.+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999988888888888874
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.75 Score=50.93 Aligned_cols=27 Identities=30% Similarity=0.388 Sum_probs=24.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCC
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGD 735 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD 735 (928)
-++.|++.++|+.|+++|+++.|+|.-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 357899999999999999999999983
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=90.83 E-value=0.68 Score=51.01 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~ 746 (928)
++-+++.++|+.|++.|+++.++|.-+...+..+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568999999999999999999999999989888776
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.58 E-value=1.1 Score=44.17 Aligned_cols=27 Identities=22% Similarity=0.413 Sum_probs=23.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
+-+++.++|+.|+++|+++.++|..+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999996543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=90.37 E-value=0.49 Score=48.60 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=25.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
++.|++.++++.|+++|++++++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.90 E-value=1.8 Score=44.77 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=33.2
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
++-++.+++.++|+.|+++|+++.|+|..+......+.+..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 34578999999999999999999999998776655554443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.81 E-value=1 Score=51.78 Aligned_cols=58 Identities=12% Similarity=0.072 Sum_probs=53.2
Q ss_pred HhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 694 KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 694 ~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
+.-.+..|.|++...-+.+.+....|+.|-++.|+.+..|-++.....-+|.++||-.
T Consensus 810 Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEa 867 (1354)
T KOG4383|consen 810 QAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEA 867 (1354)
T ss_pred HHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhcccc
Confidence 3446788999999999999999999999999999999999999999999999999854
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.69 E-value=7.9 Score=41.02 Aligned_cols=197 Identities=12% Similarity=0.051 Sum_probs=101.5
Q ss_pred eecccCCCChHHHHHHHHHc-CCeEEEEcCCcHhhHHHHHHHcC--CcccCceEE-EEcCCCchhhHhhhhcchhHHHHH
Q 002392 706 AVEDKLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACS--LLRQEMKQI-VITLDSPDMEALEKQGDKENITKV 781 (928)
Q Consensus 706 ~ieD~lr~~~~~aI~~l~~a-GIkv~ilTGD~~~ta~~ia~~~g--i~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~ 781 (928)
-....+-++..+++++|... ..-+||+|||+.........-.| ++..++.-+ .++|...... .....+ .
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~-----~~~~~~--~ 108 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINL-----AEEADL--R 108 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEec-----CHHHHh--h
Confidence 34455778899999999877 56799999999999888776333 333333222 3344321110 000111 1
Q ss_pred HHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHH--HHHHHH-----H-HhhccCCceEEEeeCcccHHHHHH
Q 002392 782 SLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK--KLEKMF-----L-DLAIDCASVICCRSSPKQKALVTR 853 (928)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~--~~~~~~-----~-~~~~~~~~~i~~r~~p~qK~~iv~ 853 (928)
....+...+.......++..-....+++.+.-.....-... ...... . --....+.+|-+|.+-..|+.+++
T Consensus 109 ~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~ 188 (266)
T COG1877 109 WLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIK 188 (266)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHH
Confidence 11222333332233333222223333333332211111000 000000 0 011234556788887778999999
Q ss_pred HH-hcCC---CEEEEEcCChhcHHHHHhCCe--e--EEecCCcchhhhhcCcEeecccccchhhh
Q 002392 854 LV-KGTG---KTTLAIGDGANDVGMLQEADI--G--VGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 854 ~l-~~~g---~~vlaiGDG~ND~~ml~~A~v--G--Iam~g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
.+ +..+ ..+++.||...|-.|+++.+- | |-++-. ..+|+..++.+-.....+.+++
T Consensus 189 ~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~-~t~a~~~~~~~~~~~~~l~~~~ 252 (266)
T COG1877 189 YIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG-STQAKFRLAGVYGFLRSLYKLL 252 (266)
T ss_pred HHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC-cccccccccccHHHHHHHHHHH
Confidence 87 5443 359999999999999999983 3 322111 1225544444444444555553
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=88.68 E-value=1.1 Score=46.55 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=36.8
Q ss_pred cCCCChHHHHHHH--HHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 710 KLQKGVPECIDKL--AQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 710 ~lr~~~~~aI~~l--~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
|+.++.+++++.+ ...|+.+.|+|--+..-...+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 5779999999999 56899999999999988888988888853
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=88.23 E-value=1.3 Score=46.18 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=26.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
++.-|++.+.++.+++.|++|+++|||+..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 355688999999999999999999999865
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=87.42 E-value=3 Score=42.17 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=26.8
Q ss_pred HHHHHHHH-hcCC-CEEEEEcCChhcHHHHHhC--CeeE-Ee
Q 002392 848 KALVTRLV-KGTG-KTTLAIGDGANDVGMLQEA--DIGV-GI 884 (928)
Q Consensus 848 K~~iv~~l-~~~g-~~vlaiGDG~ND~~ml~~A--~vGI-am 884 (928)
|..++... ++.| ..+++|||..+|+.+-++| |+-. ++
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 34444443 4444 4588999999999999999 9965 44
|
2 hypothetical protein; Provisional |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=87.37 E-value=2.1 Score=47.03 Aligned_cols=47 Identities=32% Similarity=0.451 Sum_probs=39.6
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHH---HHcCC
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG---YACSL 749 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia---~~~gi 749 (928)
|++--.+.+-+++.++|+.|++.|++++++|++...+...++ +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 666666778899999999999999999999999987777766 44565
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=86.95 E-value=2.1 Score=45.04 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=37.8
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHH--HHHHHcCCc
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI--NIGYACSLL 750 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~--~ia~~~gi~ 750 (928)
|.+.-...+-|++.++|+.|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 566667788999999999999999999999996544333 455777774
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=86.58 E-value=2.8 Score=40.45 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=31.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 743 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~i 743 (928)
|..++++.+..+.+++.|.+++-+|+|+...+...
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~T 60 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRT 60 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHH
Confidence 79999999999999999999999999997766443
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.29 E-value=2.5 Score=40.63 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=35.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.-|++++=+..++++||++.++|--+..-+..++..+|+.
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 5678888899999999999999999999899999999883
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=84.88 E-value=1.5 Score=50.59 Aligned_cols=76 Identities=17% Similarity=0.163 Sum_probs=57.5
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHhhhhHH---------Hh----cce---------------------eEEEccCCe
Q 002392 103 APSVLAPLIVVIGATMAKEGVEDWRRRKQDIE---------AN----NRK---------------------VKVYGQDHT 148 (928)
Q Consensus 103 ~~~~~~~l~~vl~i~~~~~~~~~~~r~~~~~~---------~n----~~~---------------------~~v~r~~g~ 148 (928)
.+..+..++.+++++++.+.++|+.++++.++ +. .++ -+.+| ||+
T Consensus 87 gl~nAsal~LLLLlnilL~grQdRikrr~~eqklRg~~DaI~da~kdgreiq~~nam~~dL~~pfa~s~s~h~afR-DGh 165 (1354)
T KOG4383|consen 87 GLSNASALALLLLLNILLEGRQDRIKRRAFEQKLRGAFDAILDAEKDGREIQKFNAMPKDLEAPFADSASCHSAFR-DGH 165 (1354)
T ss_pred eechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCccccCccCcHHHHHHHhc-cCe
Confidence 35566777888888999999998887766211 10 001 11245 999
Q ss_pred EEEEeccccccCcEEEecCCcccCceEEEEe
Q 002392 149 FVETKWKNLRVGDLVKVHKDEYFPADLLLLS 179 (928)
Q Consensus 149 ~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ 179 (928)
.+++|..-||.||||-+++|+..||.+.=..
T Consensus 166 lm~lP~~LLVeGDiIa~RPGQeafan~~g~~ 196 (1354)
T KOG4383|consen 166 LMELPRILLVEGDIIAFRPGQEAFANCEGFD 196 (1354)
T ss_pred eeecceeEEEeccEEEecCCccccccccccC
Confidence 9999999999999999999999999886555
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=84.71 E-value=0.92 Score=40.48 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=36.1
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHH---HHcCCc
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG---YACSLL 750 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia---~~~gi~ 750 (928)
|++...+++=|++.++|+.|+++|++++++|-....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 566667889999999999999999999999988766644444 556663
|
... |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.98 E-value=6.3 Score=39.70 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=34.2
Q ss_pred cCCCChHHHHHHHHHcCC-eEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGI-KVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGI-kv~ilTGD~~~ta~~ia~~~gi 749 (928)
|+-|+..++|+.++..|. .++|+|--+......+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 567999999999999997 9999999888777777777776
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.92 E-value=2.2 Score=43.26 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=26.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETA 740 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta 740 (928)
++.+++.++++.|+++|+++.++|.-+....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~ 114 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhH
Confidence 4789999999999999999999999765543
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.42 E-value=6.7 Score=38.84 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCC---CEEEEEcCChhcHHHHHhCCee
Q 002392 848 KALVTRLVKGTG---KTTLAIGDGANDVGMLQEADIG 881 (928)
Q Consensus 848 K~~iv~~l~~~g---~~vlaiGDG~ND~~ml~~A~vG 881 (928)
...+.+.+++.+ ....+|||-..|+.+-..|+++
T Consensus 108 ~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 108 PGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred hHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 455666666555 5689999999999999999886
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=82.59 E-value=7.3 Score=45.43 Aligned_cols=66 Identities=15% Similarity=0.220 Sum_probs=43.5
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhhhhhhchhhhh
Q 002392 846 KQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYR 919 (928)
Q Consensus 846 ~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~lll~~Gr~~~~ 919 (928)
++|..-++..........+.||+.+|.+||+.|+-+..+..+... .+...+..+.+++.-||..++
T Consensus 175 e~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~--------~~~~~~~~~~~~fhdgrl~~~ 240 (497)
T PLN02177 175 DHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKCE--------PLPRNKLLSPVIFHEGRLVQR 240 (497)
T ss_pred HHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCCC--------cCCcccCCCceeeeCCcccCC
Confidence 356666654321112237999999999999999999998543211 144456677776777876554
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=82.08 E-value=2.7 Score=44.46 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=41.1
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcC---CcHhhHHHHHHHcCCccc
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLRQ 752 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTG---D~~~ta~~ia~~~gi~~~ 752 (928)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+.+|+-..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44555667778999999999999999999996 888888888888887543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.68 E-value=1.7 Score=45.82 Aligned_cols=45 Identities=16% Similarity=0.282 Sum_probs=40.2
Q ss_pred EEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 703 G~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
|++.-.+.+-|++.++|+.|+++|++++++||+...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888877775
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=80.86 E-value=3.3 Score=44.12 Aligned_cols=41 Identities=10% Similarity=0.148 Sum_probs=37.9
Q ss_pred CC-CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 711 LQ-KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 711 lr-~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
+| |++.+++++|+++|+++.++|+.....+....+.+||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999964
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=80.83 E-value=8 Score=40.81 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=26.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
.|.-|++.+..+.+++.|++|+++|||...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 355679999999999999999999999854
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 928 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-09 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-08 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-08 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 4e-06 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-05 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 5e-05 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 5e-05 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-04 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 928 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-32 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-28 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 3e-27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 7e-22 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 2e-04 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-18 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 8e-04 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 9e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 3e-07 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 3e-07 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 3e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 6e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 1e-04 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 4e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-32
Identities = 94/487 (19%), Positives = 153/487 (31%), Gaps = 127/487 (26%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG I SDKTGTLT N M SV + ++ F + S
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM-----SVCKMFII------DKVDGDFCSLNEFSITGS- 388
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ E + N + + D + + + A+C+ + D NE
Sbjct: 389 ------------------TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNE 430
Query: 535 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594
G E E A ++ F + ++S E + ++ + LE
Sbjct: 431 TKGVYEKVGE-ATETALTTLVEKMN--VFNTEVRNLSKVERANACNSVIRQLMKKEFTLE 487
Query: 595 FTSSRKRMSVMVRNPENQL-----LLLCKGA-DSVM----FERLSKHGQQFEAETRRHIN 644
F+ RK MSV ++ + KGA + V+ + R+ + I
Sbjct: 488 FSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKIL 547
Query: 645 R------YAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERD 698
LR L +A R+ + +S + E D
Sbjct: 548 SVIKEWGTGRDTLRCLALATRDTPPKR----------------EEMVLDDSSRFMEYETD 591
Query: 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIV 758
L +G + D +K V I AGI+V ++TGD TAI I ++I
Sbjct: 592 LTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRI- 640
Query: 759 ITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDF 818
GI E++ G+ D
Sbjct: 641 ----------------------------------GI-----FGENEEVADRAYTGREFDD 661
Query: 819 ALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK---GTGKTTLAIGDGANDVGML 875
+ + A A R P K +++V+ + T GDG ND L
Sbjct: 662 LPLAEQRE-----ACRRACCF-ARVEPSHK---SKIVEYLQSYDEITAMTGDGVNDAPAL 712
Query: 876 QEADIGV 882
++A+IG+
Sbjct: 713 KKAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-28
Identities = 92/491 (18%), Positives = 149/491 (30%), Gaps = 136/491 (27%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG I SDKTGTLT N M +V+ + + D ++
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRM-----TVSHLWFD---------------NHIHSADTTE 414
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ + S+ + RVL +C+ A +
Sbjct: 415 DQSGQ---------------------------TFDQSSETWRALCRVLTLCNRAAFKSGQ 447
Query: 535 ETGEISYEAES--PDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 592
+ + E A + + + + +
Sbjct: 448 DAVPVPKRIVIGDASETALLKFSELTLG------------------NAMGYRERFPKVCE 489
Query: 593 LEFTSSRKRMSVMVRNPE---NQLLLLCKGADSVMFERLSK---HGQQ--FEAETRRHI- 643
+ F S+ K + + + +L+ KGA + ER S GQ+ + + R
Sbjct: 490 IPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQ 549
Query: 644 ---NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 700
G R L L E +Y A A L
Sbjct: 550 TAYLSLGGLGERVLGFCQLYLSEKDY---------------PPGYAFDVEAMNFPTSGLS 594
Query: 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVIT 760
G ++ D + VP+ + K AGI+V ++TGD TA I + I
Sbjct: 595 FAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA----------ASVGII 644
Query: 761 LDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 820
S E +E + + K VI+G L +
Sbjct: 645 --SEGSETVEDIAARLRVP------------------VDQVNRKDARACVINGMQLK-DM 683
Query: 821 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG---TGKTTLAIGDGANDVGMLQE 877
D ++ ++ R+SP+QK +V+ G GDG ND L++
Sbjct: 684 D---PSELVEALRTHPEMVFARTSPQQK---LVIVESCQRLGAIVAVTGDGVNDSPALKK 737
Query: 878 ADIGV--GISG 886
ADIGV GI+G
Sbjct: 738 ADIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-27
Identities = 101/491 (20%), Positives = 162/491 (32%), Gaps = 136/491 (27%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG TI SDKTGTLT N M +VA + + + E D ++
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRM-----TVAHMWFD---------------NQIHEADTTE 409
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ + S R+ A+C+ A+ +
Sbjct: 410 NQSGA---------------------------AFDKTSATWSALSRIAALCNRAVFQAGQ 442
Query: 535 ETGEISYEAES--PDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 592
+ I + + E+A + S Q + +
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCG------------------SVQGMRDRNPKIVE 484
Query: 593 LEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSK---HGQQ--FEAETRRHI- 643
+ F S+ K + N E++ LL+ KGA + +R S +G + + + +
Sbjct: 485 IPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQ 544
Query: 644 ---NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 700
G R L + L ED+Y ++ A DL
Sbjct: 545 NAYLELGGLGERVLGFCHFALPEDKY---------------NEGYPFDADEPNFPTTDLC 589
Query: 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVIT 760
+G A+ D + VP+ + K AGIKV ++TGD TA I K + I
Sbjct: 590 FVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA----------KGVGII 639
Query: 761 LDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 820
+ + I +V+ V+ G L L
Sbjct: 640 SEGNETIEDIAARLNIPIGQVNPRDAK--------------------ACVVHGSDLK-DL 678
Query: 821 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG---TGKTTLAIGDGANDVGMLQE 877
++ D+ ++ R+SP+QK +V+G G GDG ND L++
Sbjct: 679 S---TEVLDDILHYHTEIVFARTSPQQK---LIIVEGCQRQGAIVAVTGDGVNDSPALKK 732
Query: 878 ADIGV--GISG 886
ADIGV GISG
Sbjct: 733 ADIGVAMGISG 743
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 7e-22
Identities = 52/300 (17%), Positives = 94/300 (31%), Gaps = 84/300 (28%)
Query: 587 YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRY 646
+H L F KR ++ + + KGA + E L+K + I++Y
Sbjct: 392 IREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVLSIIDKY 450
Query: 647 AEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATA 706
AE GLR+L +A + + E E +G
Sbjct: 451 AERGLRSLAVARQVVPEKT--------------------------KESPGAPWEFVGLLP 484
Query: 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM 766
+ D + E I + G+ V ++TGD++ G +++ + +
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG----------RRLGMGTNMYPS 534
Query: 767 EALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 826
AL ++ V + I + DG FA
Sbjct: 535 SAL---LGTHKDANLASIPVEELIEK------------------ADG----FA------- 562
Query: 827 MFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG 886
P+ K + + ++ GDG ND L++ADIG+ ++
Sbjct: 563 ---------------GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD 607
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYG 449
EE+ +D + SDKTGTLT N + K V G
Sbjct: 318 EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKG 352
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-18
Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 97/304 (31%)
Query: 587 YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHI--- 643
Y++L F K++ +V +P+ + + KGA + + + E +
Sbjct: 443 YKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK-TVEEDHPIPEEVDQAYKNK 501
Query: 644 -NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILL 702
+A G R+L +A + E +L
Sbjct: 502 VAEFATRGFRSLGVARKR----------------------------------GEGSWEIL 527
Query: 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLD 762
G D + + + + G+ + +LTGD + A +Q+ + +
Sbjct: 528 GIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS----------RQLGLGTN 577
Query: 763 SPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822
+ E L G + V + DG FA
Sbjct: 578 IYNAERLGLGG----GGDMPGSEVYDFVEA------------------ADG----FA--- 608
Query: 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 882
P+ K V +++ G GDG ND L++AD G+
Sbjct: 609 -------------------EVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGI 649
Query: 883 GISG 886
+ G
Sbjct: 650 AVEG 653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 8e-04
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKC-SVAGVAYGRVM 452
E L V+ + SDKTGTLT N + +VAGV +M
Sbjct: 367 ESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLM 405
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 9e-15
Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 32/132 (24%)
Query: 581 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSK---HGQQ--F 635
+ + ++ + + F R+RMSV+V L+CKGA + S+ +G+
Sbjct: 50 RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPL 109
Query: 636 EAETRRHI----NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASA 691
+ R I + GLR + +A + L E
Sbjct: 110 DDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY----------------------- 146
Query: 692 AEKIERDLILLG 703
E DLIL G
Sbjct: 147 QRADESDLILEG 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.2 bits (150), Expect = 6e-10
Identities = 69/436 (15%), Positives = 135/436 (30%), Gaps = 117/436 (26%)
Query: 4 ERKRKILFSKIYSFA-----------CWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQ 52
R++L SK Y W F + +I ++ + +
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNA-F-NLSCKI-------LLTTRFKQVTDFLS 282
Query: 53 LNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIV 112
+ + + P + + + L P + P +
Sbjct: 283 AATTTHISL--DHHSMTLTPDEVKSLLLKYLDC--------RPQDL-PREVLTT-NPRRL 330
Query: 113 -VIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKD-EY 170
+I ++ ++G+ W K N K+ T +E+ L + K+
Sbjct: 331 SIIAESI-RDGLATWDNWKH---VNCDKLT------TIIESSLNVLEPAEYRKMFDRLSV 380
Query: 171 FPADLL----LLSSIYEDGICYVETMNLDGETNLKL--KRSLEATNHLRDEESFQKFTAV 224
FP LLS I+ D I + ++ L K+ E+T +
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS------IYLE 434
Query: 225 IKCEDPNE-----RL---YSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276
+K + NE + Y+ T + L P + D Y Y G
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDD----LIPPYL---D------QYFYS---HIG 478
Query: 277 HDTKVMQNATDPPSKRSKIERKMDKIVYLLFS--------TLILISSTGSVFFGIETKRD 328
H K +++ +R + R V+L F +++GS+ + T +
Sbjct: 479 HHLKNIEHP-----ERMTLFRM----VFLDFRFLEQKIRHDSTAWNASGSI---LNTLQQ 526
Query: 329 IDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQS 388
+ K + Y+ +D Y+ + A L FL I +L S + +L+
Sbjct: 527 L---KFYKPYICDNDPK--YERL---VNAILDFLPK-------IEENLICS-KYTDLLRI 570
Query: 389 VFINHDRDMYYEDTDK 404
+ + +E+ K
Sbjct: 571 AL-MAEDEAIFEEAHK 585
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 1e-09
Identities = 84/602 (13%), Positives = 172/602 (28%), Gaps = 172/602 (28%)
Query: 147 HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICY-VETMNLDGETNLKLKRS 205
H ET + D++ V +D F + D C V+ M + ++
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDA-FVDNF--------D--CKDVQDMPKSILSKEEIDHI 54
Query: 206 LEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYP--LSPQQILLRDSKLK 263
+ + + + + F E + FV + Y +SP + R +
Sbjct: 55 IMSKD--AVSGTLRLFW--TLLSKQEEMVQKFVEEV--LRINYKFLMSPIKTEQRQPSMM 108
Query: 264 NTDYVYGVVVFTGHDTKVMQNATDPPSKRS-KIERKMDKIVYLLFSTLILISSTGSVFFG 322
Y+ D + N +K + + K+ L L + + G
Sbjct: 109 TRMYIE------QRD--RLYNDNQVFAKYNVSRLQPYLKLRQALLE---LRPAKNVLIDG 157
Query: 323 IETKRDIDG-GKIRRWYLQPDDATVFYDPRRAPLAAFL---HFLTGLMLYG-YLIPISLY 377
+ G GK T +A + + + M + + + +
Sbjct: 158 VL------GSGK-----------TW--------VALDVCLSYKVQCKMDFKIFWLNLKNC 192
Query: 378 ISIE-IVKVLQSVFINHDRDMY-YEDTDKPARARTSNLNEELGQVDT---------ILSD 426
S E ++++LQ + D + D + R ++ EL ++ +L +
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252
Query: 427 KTGTLTCNSMEFVKC-------------SVAGVAYGRV-MTEVERTLAKRKGERTFE--V 470
N+ C ++ + + TL + + +
Sbjct: 253 VQNAKAWNAFNL-SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311
Query: 471 DDSQTDAP--GLNGN------IVESGKSVKGFNFRDERIMNGQW--VN-EPHSDVIQKF- 518
D D P L N I ES RD W VN + + +I+
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAES--------IRDGLATWDNWKHVNCDKLTTIIESSL 363
Query: 519 -----------FRVLAICHTAIP-DVN--EETGEISYEAESPDEAAFVIAAREVGFQFFG 564
F L++ P + + + + V+ +
Sbjct: 364 NVLEPAEYRKMFDRLSV----FPPSAHIPTILLSLIWFDVIKSDVMVVVN------KLHK 413
Query: 565 SS-------QTSISLHELDPVSGQKVNRVYELLH--VLEFTSSRKRMSVMVRNPENQLLL 615
S +++IS+ + K+ Y LH +++ + K + L+
Sbjct: 414 YSLVEKQPKESTISIPSIYLELKVKLENEYA-LHRSIVDHYNIPKTF------DSDDLIP 466
Query: 616 LCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675
D + + H + E H R R + + +R FL+
Sbjct: 467 PY--LDQYFYSHIGHHLKNIE-----HPERMTL--FRMVFLDFR-------------FLE 504
Query: 676 AK 677
K
Sbjct: 505 QK 506
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 9e-09
Identities = 78/513 (15%), Positives = 151/513 (29%), Gaps = 177/513 (34%)
Query: 359 LHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYY-EDTDKPARARTSNLNEEL 417
+ F TG Y Y +I+ V + F++ + D +D K + EE
Sbjct: 7 MDFETGEHQYQYK---------DILSVFEDAFVD-NFDCKDVQDMPKSILS-----KEE- 50
Query: 418 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERT-----LAKRKGERTFE--V 470
+D I+ K V T K E + V
Sbjct: 51 --IDHIIMSKD-------------------------AVSGTLRLFWTLLSKQEEMVQKFV 83
Query: 471 DDS-QTDAPGLNGNIVESGKS----VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAIC 525
++ + + L I + + + + +R+ N V ++ + + L
Sbjct: 84 EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL--- 140
Query: 526 HTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHEL--DPVSGQKV 583
A+ ++ + G GS +T ++L V +
Sbjct: 141 RQALLELRPAKNVLID-----------------GV--LGSGKTWVALDVCLSYKVQCKMD 181
Query: 584 NRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQ-------QFE 636
+++ L + +V+ L L D + S H +
Sbjct: 182 FKIF----WLNLKNCNSPETVL-----EMLQKLLYQIDP-NWTSRSDHSSNIKLRIHSIQ 231
Query: 637 AETRRHI--NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKA-----KTSVTSDREALVA 689
AE RR + Y L++ L + + A K +T+ R V
Sbjct: 232 AELRRLLKSKPYENC----LLV----L--LN--VQNAKAWNAFNLSCKILLTT-RFKQVT 278
Query: 690 SAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET--AINIGYAC 747
L AT L LT D++++ +
Sbjct: 279 DF---------LSAATTTHISLDH--------------HSMTLTPDEVKSLLLKYLDCRP 315
Query: 748 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGIS------QVNSAK 801
L +E+ +P ++S+ + + IR+G++ VN K
Sbjct: 316 QDLPREVLTT-----NP--------------RRLSI--IAESIRDGLATWDNWKHVNCDK 354
Query: 802 ESKVTFGLVIDGKSLDFALD-KKLEKMFLDLAI 833
+ + I+ SL+ L+ + KMF L++
Sbjct: 355 LTTI-----IE-SSLN-VLEPAEYRKMFDRLSV 380
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 9e-05
Identities = 40/237 (16%), Positives = 73/237 (30%), Gaps = 76/237 (32%)
Query: 660 ELGEDEYR------IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK 713
E GE +Y+ ++E F+ D + + S K E D I++ AV
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFD--CKDVQDMPKSILSKEEIDHIIMSKDAVS----- 62
Query: 714 GVPECIDKLAQAGIK-VWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQ 772
G L + V + + N + S ++ E +Q S +Q
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRI--NYKFLMSPIKTEQRQ-----PSMMTRMYIEQ 115
Query: 773 -----GDKENITK--VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE 825
D + K VS ++R+ + ++ AK ++IDG
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK------NVLIDG------------ 157
Query: 826 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 882
+ G+GKT +A+ D + + D +
Sbjct: 158 -V----------------------------LGSGKTWVAL-DVCLSYKVQCKMDFKI 184
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 7e-04
Identities = 90/702 (12%), Positives = 189/702 (26%), Gaps = 215/702 (30%)
Query: 27 DHAQIGQRGFARVVYCND-PDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANI 85
D + + F C D D P+ + +S + + V+
Sbjct: 20 DILSVFEDAFVDNFDCKDVQDMPKSI--------LSKEEI-------DHIIMSKDAVSGT 64
Query: 86 YFL-----------VVAFVSFSPLAP-YSAPSVLAPL-IVVIGATMAKEGVEDWRRRKQD 132
L V FV L Y +++P+ +M + R R +
Sbjct: 65 LRLFWTLLSKQEEMVQKFVE-EVLRINY--KFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121
Query: 133 IEANNRKVKVY-GQDHTFVETKWKNLRVGDLVKVH------KDEYFPADLLLLSSI---Y 182
K V Q + + LR V + K + D+ L +
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK-TWVALDVCLSYKVQCKM 180
Query: 183 EDGICYVETMNLDGETNLKLKRSLEATNHLRD----EESFQKFTAVIKCEDPNERLYSFV 238
+ I ++ + L+ L+ + D S ++ L +
Sbjct: 181 DFKIFWL-NLKNCNSPETVLEM-LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 239 GTLQYEGKQYP--LSPQQILLRDSKLKNTDYVYGV---VVFTGHDTKVMQNATD--PPSK 291
+ K Y L ++L + + + + ++ T +V TD +
Sbjct: 239 -----KSKPYENCL----LVLLNVQNAKAWNAFNLSCKILLTTRFKQV----TDFLSAAT 285
Query: 292 RSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPR 351
+ I + L+ + P D PR
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLK----YLDCR----------------PQD-----LPR 320
Query: 352 RA----PL-----AAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINH-----DRDM 397
P A + GL + +++ + + + +N R M
Sbjct: 321 EVLTTNPRRLSIIAESIR--DGLATWDNW----KHVNCDKLTTIIESSLNVLEPAEYRKM 374
Query: 398 YY------EDTDKPARART---SNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAY 448
+ P + ++ + V +++ + K S+
Sbjct: 375 FDRLSVFPPSAHIPTILLSLIWFDVIKS--DVMVVVN-----------KLHKYSL----- 416
Query: 449 GRVMTEVERTLAKRKGERTFEVDDSQTDA-------PGLNGNIVESGKSVKGFNFRDERI 501
+ K+ E T + + L+ +IV+ K F+ D
Sbjct: 417 ----------VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP 466
Query: 502 MNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISY---EAESPDEAA-------- 550
P+ D Q F+ H I + E P+
Sbjct: 467 --------PYLD--QYFY-----SH------------IGHHLKNIEHPERMTLFRMVFLD 499
Query: 551 --FVIAA-REVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRM--SVM 605
F+ R + S +L +L + Y+ ++ + +R+ +++
Sbjct: 500 FRFLEQKIRHDSTAWNASGSILNTLQQL---------KFYK-PYICDNDPKYERLVNAIL 549
Query: 606 --VRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINR 645
+ E L+ K D + +++ FE E + + R
Sbjct: 550 DFLPKIEEN-LICSKYTDLLRIALMAEDEAIFE-EAHKQVQR 589
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 40/185 (21%)
Query: 717 ECIDKLAQ--AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGD 774
+ I + + A + L + ++I ++ + ++ L
Sbjct: 21 DNIINIMKTFAPPEWMALKDGVLSKTLSI-------KEGVGRMF---------GLLPSSL 64
Query: 775 KENITKVSLESVTKQIREGISQ-VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833
KE IT LE IREG + V E ++ F ++ G +DF + LE + I
Sbjct: 65 KEEITSFVLEDAK--IREGFREFVAFINEHEIPFYVISGG--MDFFVYPLLEGIVEKDRI 120
Query: 834 -----------------DCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQ 876
C K V + + + IGD DV +
Sbjct: 121 YCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAK 180
Query: 877 EADIG 881
+D+
Sbjct: 181 LSDLC 185
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 39/181 (21%)
Query: 715 VPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG 773
VPE A+ GI T + Y L++Q ++ L++ G
Sbjct: 14 VPEIWIAFAEKTGIDALKAT---TRDIPD--YD-VLMKQRLR------------ILDEHG 55
Query: 774 DKENITKVSLESVTKQIR--EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLD- 830
K ++ V ++ EG + + ++ D + ++
Sbjct: 56 LKLGD----IQEVIATLKPLEGAVEFVDWLRERFQVVILSDT--FYEFSQPLMRQLGFPT 109
Query: 831 -----LAID----CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 881
L ID + PK++++ K +A GD ND ML EA G
Sbjct: 110 LLCHKLEIDDSDRVVGYQLRQKDPKRQSV--IAFKSLYYRVIAAGDSYNDTTMLSEAHAG 167
Query: 882 V 882
+
Sbjct: 168 I 168
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-SDYAIAQFRFLERLL 910
K + IGDGA D+ AD +G G Q V + + I F L L
Sbjct: 172 KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 862 TLAIGDGANDVGMLQEADIGVG 883
T+A+GDGAND+ M ++A + +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 862 TLAIGDGANDVGMLQEADIGVG 883
TL +GDGAND+ M + A I +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 862 TLAIGDGANDVGMLQEADIGVG 883
+A GDGAND+ ML+ A G+
Sbjct: 265 IIACGDGANDLPMLEHAGTGIA 286
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 862 TLAIGDGANDVGMLQEADIGVG 883
T+A+GDGAND+ M+ A +GV
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 6e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 862 TLAIGDGANDVGMLQEADIGVG 883
T+A+GDGAND+ ML A +G+
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 25/225 (11%), Positives = 60/225 (26%), Gaps = 39/225 (17%)
Query: 717 ECIDKLAQAGIKVWVLTGDKMETAIN--------IGYACSLLRQEMKQIVITLDSPDMEA 768
E +++L G+ V +T K + I L V
Sbjct: 23 EALERLRALGVPVVPVTA-KTRKEVEALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYR 81
Query: 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMF 828
+ + L I V + ++ A ++ ++
Sbjct: 82 VVSLAWPYRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETL 141
Query: 829 LDLAIDCASVICCRSS--------------PKQ-------KALVTRLVKGTGK-TTLAIG 866
+ + +V+ + K L + +G
Sbjct: 142 VLCPEEVEAVLEALEAVGLEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLG 201
Query: 867 DGANDVGMLQEADIGVGISGVEGMQAVMSSD--------YAIAQF 903
D ND+ + + D+ V + + + V+++ YA+ ++
Sbjct: 202 DSLNDLPLFRAVDLAVYVGRGDPPEGVLATPAPGPEGFRYAVERY 246
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 4e-04
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 848 KALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG 886
K L+ + + A+GD ND M + D +
Sbjct: 185 KILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGS 223
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 928 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.86 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.89 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.86 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.84 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.78 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.73 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.65 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.19 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.15 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.15 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.07 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.01 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.99 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.94 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.93 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.92 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.89 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.89 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.87 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.85 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.85 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.85 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.84 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.83 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.82 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.76 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.76 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.75 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.73 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.71 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.69 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.64 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.62 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.6 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.59 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.57 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.57 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.54 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.51 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.5 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.47 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.47 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.47 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.44 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.44 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.43 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.42 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.4 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.39 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.37 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.37 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.3 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.25 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.23 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.22 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.21 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.2 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.19 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.17 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.17 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.16 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.15 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.14 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.12 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.12 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.07 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.06 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.05 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.05 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.05 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.02 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.01 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.0 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.0 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.99 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.97 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.94 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.94 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.94 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.89 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.89 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.88 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.88 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.87 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.85 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.84 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.82 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.82 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.82 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.79 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.76 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.73 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.73 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.67 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.66 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.66 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.64 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.6 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.58 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.57 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.56 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.53 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.5 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.49 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.45 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.42 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.37 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.36 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.28 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.24 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.12 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.1 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.01 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.99 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.95 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.79 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.76 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.72 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.65 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.64 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.61 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.58 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.51 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.37 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.31 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.29 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.22 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.15 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.14 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.06 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.01 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.69 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.37 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.28 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.28 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.18 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.18 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.45 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 93.98 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.94 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 92.8 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 92.62 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 92.56 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 92.14 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 83.98 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 81.96 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 81.84 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 81.62 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-93 Score=888.76 Aligned_cols=679 Identities=20% Similarity=0.216 Sum_probs=532.8
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CC-------CCCCchhhHHHHHHHHHHHh
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LA-------PYSAPSVLAPLIVVIGATMA 119 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~-------~~~~~~~~~~l~~vl~i~~~ 119 (928)
++|+.+||+|.+..++...++ +.|++||.++++++++++++++++. +. ..+.+...++++++++++++
T Consensus 79 ~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 79 AELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHH
Confidence 578899999999988875544 8899999999999999999988763 11 12245567788888999999
Q ss_pred HHHHHHHHHhhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCC
Q 002392 120 KEGVEDWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDG 196 (928)
Q Consensus 120 ~~~~~~~~r~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtG 196 (928)
..+++++|++++.+.++ +.+++|+| ||++++|+|++|+|||||.|++||+||||++||++++ +.||||+|||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~ViR-dG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTG 230 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVIR-DGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTG 230 (1034)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEE-CCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCC
Confidence 99999999999876654 67899999 9999999999999999999999999999999999665 7899999999
Q ss_pred CccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEec
Q 002392 197 ETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276 (928)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG 276 (928)
||.|+.|.+..... .+.......|+||.+.+|. +.|+|++||
T Consensus 231 ES~pv~K~~~~~~~-----------------~~~~~~n~~f~GT~v~~G~---------------------~~~vVv~tG 272 (1034)
T 3ixz_A 231 ESEPQTRSPECTHE-----------------SPLETRNIAFFSTMCLEGT---------------------AQGLVVNTG 272 (1034)
T ss_pred CCCCeeccCCCccc-----------------cccccccceecceeEEeec---------------------ceEEEEeeh
Confidence 99999998754220 0001122456777777666 999999999
Q ss_pred Cccc---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCc
Q 002392 277 HDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (928)
Q Consensus 277 ~~Tk---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 353 (928)
.+|. +..+....+.+++|+++.+++++.+++.++++++++.++++.++.. +
T Consensus 273 ~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~----------------- 326 (1034)
T 3ixz_A 273 DRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY---------T----------------- 326 (1034)
T ss_pred hhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------h-----------------
Confidence 9995 4555667778899999999999999988888887777665543211 1
Q ss_pred hhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcccc
Q 002392 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (928)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (928)
+...+..++.+++.+||++|+++++++..+++.+| +++++++|+++++|+||++++||||||||||+
T Consensus 327 ---~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~ 393 (1034)
T 3ixz_A 327 ---FLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQ 393 (1034)
T ss_pred ---HHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCccc
Confidence 23477888999999999999999999999999998 89999999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchh
Q 002392 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (928)
Q Consensus 434 n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (928)
|+|+|.++++++..|....... ..+. ...+..+
T Consensus 394 n~m~v~~~~~~~~~~~~~~~~~-----------------------------------~~~~------------~~~~~~~ 426 (1034)
T 3ixz_A 394 NRMTVSHLWFDNHIHSADTTED-----------------------------------QSGQ------------TFDQSSE 426 (1034)
T ss_pred CeEEEEEEEECCccccccCccc-----------------------------------cccc------------ccCcCCH
Confidence 9999999998877654321000 0000 0011234
Q ss_pred HHHHHHHHHhhhcccccCCCCCCC--ceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeE
Q 002392 514 VIQKFFRVLAICHTAIPDVNEETG--EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591 (928)
Q Consensus 514 ~~~~~~~~l~lc~~~~~~~~~~~~--~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 591 (928)
....++.++++||++......... ......++|.|.|+++++...+..... .+..|+++.
T Consensus 427 ~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~------------------~~~~~~~~~ 488 (1034)
T 3ixz_A 427 TWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG------------------YRERFPKVC 488 (1034)
T ss_pred HHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH------------------HHHhCcceE
Confidence 566889999999998764332211 112345799999999999887643211 246788999
Q ss_pred eecccCCcceeEEEEEcC---CCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEE
Q 002392 592 VLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYR 659 (928)
Q Consensus 592 ~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k 659 (928)
.+||+|+||||++++..+ ++++++|+||||+.|+++|+.. +++.++.+.+.++.++.+|+|||++|+|
T Consensus 489 ~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~ 568 (1034)
T 3ixz_A 489 EIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQL 568 (1034)
T ss_pred EeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEE
Confidence 999999999999988764 3679999999999999999742 3445677888999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 660 ~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
.++++++..|... +. +..+.+|+||+|+|+++++||+|++++++|++|+++||+|||+|||+..|
T Consensus 569 ~l~~~~~~~~~~~----------~~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~t 633 (1034)
T 3ixz_A 569 YLSEKDYPPGYAF----------DV-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPIT 633 (1034)
T ss_pred ecChhhccccccc----------ch-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHH
Confidence 9998766544211 11 11245689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHH
Q 002392 740 AINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA 819 (928)
Q Consensus 740 a~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~ 819 (928)
|.++|++|||..++... .... ......... ..........+++|..+..+
T Consensus 634 A~~ia~~lgi~~~~~~~---------i~~~-----------------~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~ 683 (1034)
T 3ixz_A 634 AKAIAASVGIISEGSET---------VEDI-----------------AARLRVPVD----QVNRKDARACVINGMQLKDM 683 (1034)
T ss_pred HHHHHHHcCCCCCCchH---------HHHH-----------------HHhhCccch----hccccccceeEEecHhhhhC
Confidence 99999999997543210 0000 000000000 00112234567888888766
Q ss_pred hHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEe
Q 002392 820 LDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899 (928)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~v 899 (928)
..+++.+ ....+...+|+|++|+||..+++.+++.|..|+|+|||.||++||++||+||||+++..+.||++||+|
T Consensus 684 ~~~~l~~----~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~V 759 (1034)
T 3ixz_A 684 DPSELVE----ALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMI 759 (1034)
T ss_pred CHHHHHH----HHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEE
Confidence 5444433 333455679999999999999999988999999999999999999999999999745455599999999
Q ss_pred eccccc--chhhhhhhchhhhhhccccccc
Q 002392 900 IAQFRF--LERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 900 i~~f~~--l~~lll~~Gr~~~~~i~~~i~y 927 (928)
+.++++ +..+ +.|||++|+|+++++.|
T Consensus 760 l~~~~~~gI~~a-i~~GR~i~~ni~k~i~~ 788 (1034)
T 3ixz_A 760 LLDDNFASIVTG-VEQGRLIFDNLKKSIAY 788 (1034)
T ss_pred eccCCchHHHHH-HHHHHHHHHHHHHHHHH
Confidence 997555 7777 88999999999999987
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-93 Score=893.53 Aligned_cols=678 Identities=20% Similarity=0.229 Sum_probs=526.7
Q ss_pred cccccCCCCceeecccc-chhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CC---C----CCCchhhHHHHHHHHHHH
Q 002392 49 EVVQLNYRGNYVSTTKY-TAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LA---P----YSAPSVLAPLIVVIGATM 118 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky-~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~--~~---~----~~~~~~~~~l~~vl~i~~ 118 (928)
++|+.+||.|.+..++. ++| +.|++||.++++++++++++++++. +. . .+.+...+++++++++++
T Consensus 74 ~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 149 (1028)
T 2zxe_A 74 KEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTG 149 (1028)
T ss_dssp HHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence 46788999999998864 555 7899999999999999999998764 11 0 113445677888899999
Q ss_pred hHHHHHHHHHhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCC
Q 002392 119 AKEGVEDWRRRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLD 195 (928)
Q Consensus 119 ~~~~~~~~~r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~Lt 195 (928)
+.+++++++++++.+.+ .+.+++|+| ||++++|++++|+|||||.|++||+|||||+|+++++ |+||||+||
T Consensus 150 ~~~~~qe~ka~~~~~~L~~l~~~~a~V~R-dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LT 224 (1028)
T 2zxe_A 150 CFSYYQEAKSSRIMDSFKNMVPQQALVIR-DGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLT 224 (1028)
T ss_dssp HHHHHHTCCCCCHHHHHHTTSCSEEEEEE-TTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeeEEEE-CCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccC
Confidence 99999999888876655 478999999 9999999999999999999999999999999999543 899999999
Q ss_pred CCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEe
Q 002392 196 GETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFT 275 (928)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~t 275 (928)
|||.|+.|.+++.. + .+++.+|++++||.+.+ |++.|+|++|
T Consensus 225 GES~pv~K~~~~~~--------------------~-----------------~~~~~~n~v~~GT~v~~-G~~~~~V~~t 266 (1028)
T 2zxe_A 225 GESEPQTRSPEFSS--------------------E-----------------NPLETRNIAFFSTNCVE-GTARGVVVYT 266 (1028)
T ss_dssp SCCSCEECCSSCCC--------------------S-----------------STTTCSSEECTTCEEEE-EEEEEEEEEC
T ss_pred CCCcceecccCCCC--------------------C-----------------CcccccceEEeCceEEc-ceEEEEEEEe
Confidence 99999999875421 0 14566777888887774 6799999999
Q ss_pred cCccce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCC
Q 002392 276 GHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352 (928)
Q Consensus 276 G~~Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 352 (928)
|.+|.+ .++...++.+++|+++.+++++.+++.++++++++.++++.+ ... +|+
T Consensus 267 G~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~--------~~~-------------- 323 (1028)
T 2zxe_A 267 GDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGY--------SWL-------------- 323 (1028)
T ss_dssp GGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC--------CHH--------------
T ss_pred ccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccC--------cHH--------------
Confidence 999965 555667788899999999999999999888888877766432 210 232
Q ss_pred chhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccc
Q 002392 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (928)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT 432 (928)
..+..++.+++.+||++|+++++++..+++.+| +++++++|+++++|+||++++||||||||||
T Consensus 324 ------~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT 387 (1028)
T 2zxe_A 324 ------EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLT 387 (1028)
T ss_dssp ------HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCB
T ss_pred ------HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCC
Confidence 256667778889999999999999999999988 8899999999999999999999999999999
Q ss_pred cceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCch
Q 002392 433 CNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHS 512 (928)
Q Consensus 433 ~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 512 (928)
+|+|+|.++++.+..|.....+ + ..+.. ....+
T Consensus 388 ~n~m~v~~~~~~~~~~~~~~~~-------------~----------------------~~~~~------------~~~~~ 420 (1028)
T 2zxe_A 388 QNRMTVAHMWFDNQIHEADTTE-------------N----------------------QSGAA------------FDKTS 420 (1028)
T ss_dssp CSSCEEEEEEETTEEEECCCCT-------------T----------------------CCSCC------------CCSSC
T ss_pred CCeEEEEEEEECCeeeeccCCC-------------C----------------------ccccc------------cccCC
Confidence 9999999999887765421100 0 00000 00123
Q ss_pred hHHHHHHHHHhhhcccccCCCCCCCc--eEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEe
Q 002392 513 DVIQKFFRVLAICHTAIPDVNEETGE--ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELL 590 (928)
Q Consensus 513 ~~~~~~~~~l~lc~~~~~~~~~~~~~--~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 590 (928)
+....++.++++||++..+...+... ..+..++|+|.||+++|+..|.... ..+..|+++
T Consensus 421 ~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~------------------~~~~~~~~~ 482 (1028)
T 2zxe_A 421 ATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ------------------GMRDRNPKI 482 (1028)
T ss_dssp HHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH------------------HHHHHSCEE
T ss_pred HHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH------------------HHHHhCceE
Confidence 45567899999999987653321111 1123579999999999988642110 013457889
Q ss_pred EeecccCCcceeEEEEEcC---CCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEE
Q 002392 591 HVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAY 658 (928)
Q Consensus 591 ~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~ 658 (928)
..+||+|+||||+++++.+ ++++++|+||||+.|+++|+.. +++.++.+.++++.|+.+|+|||++|+
T Consensus 483 ~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~ 562 (1028)
T 2zxe_A 483 VEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCH 562 (1028)
T ss_dssp EEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 9999999999999999974 5788999999999999999752 234567788899999999999999999
Q ss_pred EccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 659 RELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 659 k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
|.++++++.++. . .+++ ..+.+|+|++|+|+++++|++|++++++|++|+++||++||+|||+..
T Consensus 563 ~~l~~~~~~~~~--------~--~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~ 627 (1028)
T 2zxe_A 563 FALPEDKYNEGY--------P--FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 627 (1028)
T ss_dssp EECCSTTSCTTC--------C--CCTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred EecCcccccccc--------c--cchh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHH
Confidence 999765432210 0 0110 012357899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhH
Q 002392 739 TAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDF 818 (928)
Q Consensus 739 ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~ 818 (928)
||.++|++|||..++... ..+.. .......... ........+++|..+..
T Consensus 628 tA~~ia~~lgi~~~~~~~---------i~~~~-----------------~~~~~~~~~~----~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 628 TAKAIAKGVGIISEGNET---------IEDIA-----------------ARLNIPIGQV----NPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp HHHHHHHHHTSSCTTCCC---------HHHHH-----------------HHTTCCGGGS----CGGGCCEEEEEHHHHTT
T ss_pred HHHHHHHHcCCCCCCchh---------HHHHH-----------------hhcCcchhhc----cccccceEEEEcHHhhh
Confidence 999999999997543211 00000 0000000000 01122356888988876
Q ss_pred HhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcE
Q 002392 819 ALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898 (928)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~ 898 (928)
+.++++.+ +...+...+|||++|+||..+|+.+++.|+.|+|+|||.||++||++|||||||+.+..+.|+++||+
T Consensus 678 ~~~~~l~~----~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~ 753 (1028)
T 2zxe_A 678 LSTEVLDD----ILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADM 753 (1028)
T ss_dssp CCHHHHHH----HHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSE
T ss_pred CCHHHHHH----HHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCE
Confidence 55444433 33345567999999999999999998889999999999999999999999999962222338999999
Q ss_pred eecc--cccchhhhhhhchhhhhhccccccc
Q 002392 899 AIAQ--FRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 899 vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
++.+ |..+.++ +.|||++|+|+++++.|
T Consensus 754 Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~ 783 (1028)
T 2zxe_A 754 ILLDDNFASIVTG-VEEGRLIFDNLKKSIAY 783 (1028)
T ss_dssp EETTCCTHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred EecCCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9996 6669998 89999999999999887
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-92 Score=880.01 Aligned_cols=702 Identities=21% Similarity=0.242 Sum_probs=520.1
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCC-----CCchhhHHHHHHHHHHHhHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPY-----SAPSVLAPLIVVIGATMAKE 121 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~-~~~~-----~~~~~~~~l~~vl~i~~~~~ 121 (928)
.++|+.+||.|.+..+++..++ +.|++||+++++++|++++++++++ +.+. ..|...+.++++++++.+..
T Consensus 30 ~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 106 (995)
T 3ar4_A 30 VKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVG 106 (995)
T ss_dssp HHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHH
Confidence 3577889999999998764433 8999999999999999999999886 3221 13334455566677788888
Q ss_pred HHHHHHHhhhhHH---HhcceeEEEccCCe--EEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCC
Q 002392 122 GVEDWRRRKQDIE---ANNRKVKVYGQDHT--FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDG 196 (928)
Q Consensus 122 ~~~~~~r~~~~~~---~n~~~~~v~r~~g~--~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtG 196 (928)
.+++++.+++.+. +.+.+++|+| ||+ +++|++++|+|||||.|++||+|||||+|++.+. +.|+||||+|||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~R-~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTG 183 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVYR-ADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTG 183 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEEB-TTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHC
T ss_pred HHHHHHHHHHHHHHHccCCCeEEEEe-CCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEcccccC
Confidence 8888887776544 4578999999 876 6999999999999999999999999999987654 669999999999
Q ss_pred CccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEec
Q 002392 197 ETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276 (928)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG 276 (928)
||.|+.|.+++... + ...+.+.+|++++||.+.+ |+++|+|++||
T Consensus 184 ES~pv~K~~~~~~~-------------------~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG 228 (995)
T 3ar4_A 184 ESVSVIKHTEPVPD-------------------P---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTG 228 (995)
T ss_dssp CCSCEEECCSCCCC-------------------T---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECG
T ss_pred CCcceeccccccCC-------------------c---------------ccCcccccceEecCCEEEc-ceEEEEEEEcC
Confidence 99999998764210 0 0123456678888888875 67999999999
Q ss_pred Cccce---eecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCc
Q 002392 277 HDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (928)
Q Consensus 277 ~~Tki---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 353 (928)
.+|++ .+....++.+++|+++.+++++.+++.+++++|++.++++..+.. ....+ .+|+
T Consensus 229 ~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~--------------- 290 (995)
T 3ar4_A 229 VSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-DPVHG--GSWI--------------- 290 (995)
T ss_dssp GGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-SCSSS--SCHH---------------
T ss_pred cchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccc--chHH---------------
Confidence 99976 444566778899999999999999998888888776655432110 00000 0121
Q ss_pred hhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCcccc
Q 002392 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (928)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (928)
......|..++.+++.+|||+|+++++++..+++.+| +++++++|+++++|+||++++||||||||||+
T Consensus 291 -~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~ 359 (995)
T 3ar4_A 291 -RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTT 359 (995)
T ss_dssp -HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBC
T ss_pred -HHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCccc
Confidence 1233456788899999999999999999999999988 78899999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchh
Q 002392 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (928)
Q Consensus 434 n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (928)
|+|+|.++++.+..++...... .. ... .. ..++.+.. ...+........+
T Consensus 360 n~m~v~~~~~~~~~~~~~~~~~------~~--~~~--~~---~~~p~~~~-----------------~~~~~~~~~~~~~ 409 (995)
T 3ar4_A 360 NQMSVCKMFIIDKVDGDFCSLN------EF--SIT--GS---TYAPEGEV-----------------LKNDKPIRSGQFD 409 (995)
T ss_dssp CCCEEEEEEEEEEEETTEEEEE------EE--EEC--CS---SSSSCCCE-----------------EETTEECCGGGCH
T ss_pred CceEEEEEEecCcccCcccccc------ee--ecc--CC---CcCCcccc-----------------ccccccccccccH
Confidence 9999999988654433100000 00 000 00 00000000 0000001112335
Q ss_pred HHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEee
Q 002392 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (928)
Q Consensus 514 ~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~ 593 (928)
.+..++.++++||++.+..++..+.+. ..++|+|.||+.++++.|+ +.. ....+.............+..|++++.+
T Consensus 410 ~~~~l~~~~alc~~~~~~~~~~~~~~~-~~g~p~E~Al~~~a~~~g~-~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 486 (995)
T 3ar4_A 410 GLVELATICALCNDSSLDFNETKGVYE-KVGEATETALTTLVEKMNV-FNT-EVRNLSKVERANACNSVIRQLMKKEFTL 486 (995)
T ss_dssp HHHHHHHHHHHSCCCEEEEETTTTEEE-EESCHHHHHHHHHHHHHCT-TCC-CCTTSCTTTSTTHHHHHHHHHEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcccccCCCCcee-ecCCccHHHHHHHHHHcCC-ccc-cccccccccccccchhhhhhhCceEEEe
Confidence 677899999999998765433222222 3479999999999999887 211 1000000000000000123579999999
Q ss_pred cccCCcceeEEEEEcCCC-----cEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHH--HhcCCeeeEEE
Q 002392 594 EFTSSRKRMSVMVRNPEN-----QLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRY--AEAGLRTLVIA 657 (928)
Q Consensus 594 ~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--~~~Glr~l~~A 657 (928)
||+|+||||||+++.++| ++.+|+||||+.|+++|+.. +++.++.+.+++++| +.+|+|||++|
T Consensus 487 pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A 566 (995)
T 3ar4_A 487 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALA 566 (995)
T ss_dssp EEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred ecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEE
Confidence 999999999999998666 67999999999999999753 234566788889999 99999999999
Q ss_pred EEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002392 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (928)
Q Consensus 658 ~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~ 737 (928)
||+++..+. ...+ .+ ....+.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+.
T Consensus 567 ~k~~~~~~~----------~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~ 630 (995)
T 3ar4_A 567 TRDTPPKRE----------EMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNK 630 (995)
T ss_dssp EESSCCCGG----------GCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCH
T ss_pred EEecCcccc----------cccc-cc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCH
Confidence 999864210 0000 01 0134678999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhh
Q 002392 738 ETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 817 (928)
Q Consensus 738 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~ 817 (928)
.+|.++|++|||...+..+ . ..+++|+.+.
T Consensus 631 ~ta~~ia~~lgi~~~~~~i---~-----------------------------------------------~~~~~g~~~~ 660 (995)
T 3ar4_A 631 GTAIAICRRIGIFGENEEV---A-----------------------------------------------DRAYTGREFD 660 (995)
T ss_dssp HHHHHHHHHHTSSCTTCCC---T-----------------------------------------------TTEEEHHHHH
T ss_pred HHHHHHHHHcCcCCCCCcc---c-----------------------------------------------ceEEEchhhh
Confidence 9999999999997543110 0 0144555444
Q ss_pred HHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEec-CCcchhhhhcC
Q 002392 818 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSS 896 (928)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~-g~e~~~ak~aA 896 (928)
.+..+++.+.+. +..+|||++|+||..+|+.+++.|+.|+|+|||.||++||++||+||||+ |++. |+++|
T Consensus 661 ~l~~~~~~~~~~------~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~aA 732 (995)
T 3ar4_A 661 DLPLAEQREACR------RACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTAS 732 (995)
T ss_dssp TSCHHHHHHHHH------HCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHTC
T ss_pred hCCHHHHHHHHh------hCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--HHHhC
Confidence 333333333222 23599999999999999999888999999999999999999999999995 3343 89999
Q ss_pred cEeecc--cccchhhhhhhchhhhhhccccccc
Q 002392 897 DYAIAQ--FRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 897 D~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
|+++.+ |..+.++ +.|||++|+|+++++.|
T Consensus 733 d~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~ 764 (995)
T 3ar4_A 733 EMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRY 764 (995)
T ss_dssp SEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999986 6669998 89999999999999887
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-88 Score=826.80 Aligned_cols=588 Identities=17% Similarity=0.182 Sum_probs=475.9
Q ss_pred cccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCchhhHHHHHHHHHHHhHHHHHHHHH
Q 002392 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~~~~r 128 (928)
++|+.+||.|.++.+++++| +.|++||..+++++++++++++++. +.|...+.++++++++.+.++++++++
T Consensus 94 ~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~----g~~~~~~~i~~vv~i~~~i~~~qe~~a 165 (920)
T 1mhs_A 94 VQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGL----EDWVDFGVICGLLLLNAVVGFVQEFQA 165 (920)
T ss_dssp HHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTC----SCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788999999999998877 6788999999999999999999884 455556667778888999999999999
Q ss_pred hhhhHHHh---cceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeecc
Q 002392 129 RKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRS 205 (928)
Q Consensus 129 ~~~~~~~n---~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~ 205 (928)
+++.+.+. +.+++|+| ||++++|++++|+|||||.|++||+|||||+|++++ +.+.||||+|||||.|+.|.+
T Consensus 166 ~~a~~~L~~l~~~~a~V~R-dG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K~~ 241 (920)
T 1mhs_A 166 GSIVDELKKTLALKAVVLR-DGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDKHK 241 (920)
T ss_dssp HHHHHTTTTCCCSSCEEEC-SSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEECCS
T ss_pred HHHHHHhhccCCCEEEEEE-CCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC---ceeeeeccccCCCCcceEecC
Confidence 98877665 57899999 999999999999999999999999999999999943 126999999999999999987
Q ss_pred chhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccceee--
Q 002392 206 LEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ-- 283 (928)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~~-- 283 (928)
++. .|+||.+.+|. +.++|++||.+|.+++
T Consensus 242 gd~---------------------------v~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I~ 273 (920)
T 1mhs_A 242 GDQ---------------------------VFASSAVKRGE---------------------AFVVITATGDNTFVGRAA 273 (920)
T ss_dssp SCE---------------------------ECSCBCCSCCC---------------------EEEEEEECSTTCSTTTTT
T ss_pred CCe---------------------------eecCceEecce---------------------EEEEEEEeCCcCHHHHHH
Confidence 543 37788777776 9999999999997654
Q ss_pred -cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHHHHHHH
Q 002392 284 -NATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFL 362 (928)
Q Consensus 284 -~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (928)
....++.+++++++.++++..++++++++++++.++.+.+ . . . + +...+.
T Consensus 274 ~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~-~--~-~-----~--------------------~~~~l~ 324 (920)
T 1mhs_A 274 ALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY-R--S-N-----P--------------------IVQILE 324 (920)
T ss_dssp SSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-T--T-C-----C--------------------HHHHHH
T ss_pred HHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c--C-C-----c--------------------HHHHHH
Confidence 4456677889999999999998887776666554432211 0 0 0 1 233677
Q ss_pred HHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeEEEEEE
Q 002392 363 TGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCS 442 (928)
Q Consensus 363 ~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~ 442 (928)
.++.+++.+|||+|+++++++..+++.++ +++++++|+++.+|+||++++||||||||||+|+|+|.+++
T Consensus 325 ~av~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~ 394 (920)
T 1mhs_A 325 FTLAITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPY 394 (920)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCB
T ss_pred HHHHHHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEe
Confidence 78899999999999999999999999988 78899999999999999999999999999999999998764
Q ss_pred EcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHH
Q 002392 443 VAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVL 522 (928)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 522 (928)
..+. +. + .+++.+.
T Consensus 395 ~~~g-~~------------------------------------------------------------~-----~~ll~~a 408 (920)
T 1mhs_A 395 TVAG-VD------------------------------------------------------------P-----EDLMLTA 408 (920)
T ss_dssp CCSC-CC------------------------------------------------------------C-----THHHHHH
T ss_pred ecCC-CC------------------------------------------------------------H-----HHHHHHH
Confidence 3210 00 0 0345667
Q ss_pred hhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCccee
Q 002392 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRM 602 (928)
Q Consensus 523 ~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 602 (928)
++|+.... .+.||+|.|+++++++.+... .....|++++.+||+|.||||
T Consensus 409 ~l~~~~~~-----------~~~~P~e~Al~~~~~~~~~~~-------------------~~~~~~~~~~~~pF~s~~k~m 458 (920)
T 1mhs_A 409 CLAASRKK-----------KGIDAIDKAFLKSLKYYPRAK-------------------SVLSKYKVLQFHPFDPVSKKV 458 (920)
T ss_dssp HHSCCCSS-----------CSCCSHHHHHHHHHHHSSSCC-------------------GGGSCCCEEEEEEEETTTTEE
T ss_pred HHhcCCcc-----------cCCChHHHHHHHHHHhcccch-------------------hhccccceeEEeeccCCCCeE
Confidence 77765421 124999999999998765310 012457889999999999999
Q ss_pred EEEEEcCCCcEEEEEecCchhhHHHhccc---chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhh
Q 002392 603 SVMVRNPENQLLLLCKGADSVMFERLSKH---GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTS 679 (928)
Q Consensus 603 sviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~ 679 (928)
+++++.++|+.++|+||||+.|+++|+.. +++.++.+.+.+++|+.+|+|||++|+|..
T Consensus 459 s~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~------------------ 520 (920)
T 1mhs_A 459 VAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG------------------ 520 (920)
T ss_dssp EEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS------------------
T ss_pred EEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc------------------
Confidence 99999878888999999999999999752 334566788889999999999999998731
Q ss_pred ccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCc--eEE
Q 002392 680 VTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM--KQI 757 (928)
Q Consensus 680 ~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~--~~~ 757 (928)
|.+++|+|+++++|++|++++++|+.|+++||++||+|||+..||.+||+++||..... ...
T Consensus 521 ----------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~ 584 (920)
T 1mhs_A 521 ----------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERL 584 (920)
T ss_dssp ----------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSS
T ss_pred ----------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccce
Confidence 36899999999999999999999999999999999999999999999999999963210 000
Q ss_pred EEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCc
Q 002392 758 VITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCAS 837 (928)
Q Consensus 758 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~ 837 (928)
.+.|.. .++++.+.. .. .+.
T Consensus 585 ~~~g~~----------------------------------------------~~~~~el~~------------~~--~~~ 604 (920)
T 1mhs_A 585 GLGGGG----------------------------------------------DMPGSEVYD------------FV--EAA 604 (920)
T ss_dssp SSCBCC----------------------------------------------CGGGGGGGT------------TT--TTT
T ss_pred eecCcc----------------------------------------------cCCHHHHHH------------HH--hhC
Confidence 000000 001111110 11 123
Q ss_pred eEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhhhhhhch
Q 002392 838 VICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGH 915 (928)
Q Consensus 838 ~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr 915 (928)
.+|+|++|+||..+|+.+++.|+.|+|+|||.||++||++|||||||++. .+.|+++||+++.+ |..+.++ +.+||
T Consensus 605 ~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~g-td~ak~aADiVl~~~~~~~I~~a-i~~gR 682 (920)
T 1mhs_A 605 DGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGS-SDAARSAADIVFLAPGLGAIIDA-LKTSR 682 (920)
T ss_dssp SCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTS-CHHHHHSSSEEESSCCSHHHHHH-HHHHH
T ss_pred eEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccc-cHHHHHhcCeEEcCCCHHHHHHH-HHHHH
Confidence 48999999999999999988899999999999999999999999999642 23389999999986 6669998 99999
Q ss_pred hhhhhccccccc
Q 002392 916 WCYRRISMMVKL 927 (928)
Q Consensus 916 ~~~~~i~~~i~y 927 (928)
++|+|+++++.|
T Consensus 683 ~~~~ni~k~i~~ 694 (920)
T 1mhs_A 683 QIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999876
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-88 Score=824.22 Aligned_cols=598 Identities=19% Similarity=0.201 Sum_probs=465.1
Q ss_pred ccccccCCCCceeeccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcccC---CCCCCchhhHHHHHHHHHHHhHHHHH
Q 002392 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPL---APYSAPSVLAPLIVVIGATMAKEGVE 124 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~fl~~~l~~qf~~~~n~~~l~~~il~~~~~---~~~~~~~~~~~l~~vl~i~~~~~~~~ 124 (928)
.++|+.+||.|.+..+++++| +.|++||.+|++++++++++++++.. .....|...+.++++++++.+.++++
T Consensus 38 ~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~q 113 (885)
T 3b8c_A 38 GEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIE 113 (885)
T ss_dssp HHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTT
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999999988777 56778999999999999999998751 11113444556677777888889999
Q ss_pred HHHHhhhhHHH---hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccce
Q 002392 125 DWRRRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLK 201 (928)
Q Consensus 125 ~~~r~~~~~~~---n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~ 201 (928)
+++..++.+.+ .+.+++|+| ||++++|++++|+|||||.|++||+|||||+|+++++ ++||||+|||||.|+
T Consensus 114 e~ka~~al~~L~~~~~~~a~V~R-dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv 188 (885)
T 3b8c_A 114 ENNAGNAAAALMAGLAPKTKVLR-DGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPV 188 (885)
T ss_dssp TTTTTTHHHHTTTSCSCCCCCCC-SSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCC
T ss_pred HHHHHHHHHHHhccCCCeEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcce
Confidence 98888876655 477899999 9999999999999999999999999999999999432 689999999999999
Q ss_pred eeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCccce
Q 002392 202 LKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV 281 (928)
Q Consensus 202 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki 281 (928)
.|.+++.. |+||.+.+|. +.++|++||.+|.+
T Consensus 189 ~K~~g~~v---------------------------~~GT~v~~G~---------------------~~~~V~~tG~~T~~ 220 (885)
T 3b8c_A 189 TKHPGQEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFF 220 (885)
T ss_dssp CBSSCCCC---------------------------CSCCCCCSCC---------------------CCCBCCSCTTTTTS
T ss_pred EecCCCcc---------------------------ccCeEEeeeE---------------------EEEEEEEcCcccHH
Confidence 99875433 7777777766 99999999999976
Q ss_pred eec---CCCCCCcccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcccCCCCchhHH
Q 002392 282 MQN---ATDPPSKRSKIERKMDKIVYLLFS-TLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAA 357 (928)
Q Consensus 282 ~~~---~~~~~~k~s~~~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 357 (928)
++. ... ..+++++++.++++..+++. ++++++++.++++.+ . . .+|.
T Consensus 221 g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~--~------~~~~------------------- 271 (885)
T 3b8c_A 221 GKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-Q--R------RKYR------------------- 271 (885)
T ss_dssp TTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT-T--C------SCST-------------------
T ss_pred HHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c--c------CcHH-------------------
Confidence 443 333 56789999999999877433 222233222221111 0 0 0121
Q ss_pred HHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCCCccccceeE
Q 002392 358 FLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSME 437 (928)
Q Consensus 358 ~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 437 (928)
..+.+++.+++.+|||+|+++++++..+++.++ +++++++|+++.+|+||++++||||||||||+|+|+
T Consensus 272 -~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~ 340 (885)
T 3b8c_A 272 -DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 340 (885)
T ss_dssp -THHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCC
T ss_pred -HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceE
Confidence 157788999999999999999999999999988 899999999999999999999999999999999999
Q ss_pred EEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCCCCCchhHHHH
Q 002392 438 FVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQK 517 (928)
Q Consensus 438 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 517 (928)
|.++.+. .+... ....+
T Consensus 341 v~~~~~~--~~~~~-------------------------------------------------------------~~~~~ 357 (885)
T 3b8c_A 341 VDKNLVE--VFCKG-------------------------------------------------------------VEKDQ 357 (885)
T ss_dssp CCSCCCC--SSCSS-------------------------------------------------------------TTHHH
T ss_pred EEEEEEe--ccCCC-------------------------------------------------------------CCHHH
Confidence 8632210 01000 00125
Q ss_pred HHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccC
Q 002392 518 FFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTS 597 (928)
Q Consensus 518 ~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s 597 (928)
++...++|+... ++||.|.|+++++.+.. . ....|++++.+||+|
T Consensus 358 ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~-----------------~-----~~~~~~~~~~~pF~s 402 (885)
T 3b8c_A 358 VLLFAAMASRVE-------------NQDAIDAAMVGMLADPK-----------------E-----ARAGIREVHFLPFNP 402 (885)
T ss_dssp HHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT-----------------C-----CCCSSCCBCCCCCCT
T ss_pred HHHHHHHHhCCC-------------CCCchHHHHHHHhhchh-----------------h-----HhhcCceeecccCCc
Confidence 677778887641 36999999998764210 0 023466788999999
Q ss_pred CcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHh
Q 002392 598 SRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAK 677 (928)
Q Consensus 598 ~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~ 677 (928)
.||||+++++..+|+.++|+||||+.|+++|+.. ...++.+.+.+++++.+|+|++++|+|.+++++.
T Consensus 403 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~----------- 470 (885)
T 3b8c_A 403 VDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK----------- 470 (885)
T ss_dssp TTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS-----------
T ss_pred ccceEEEEEEecCCcEEEEEeCCHHHHHHhccCc-hhhHHHHHHHHHHHHhCCCeEEEEEEeccccccc-----------
Confidence 9999999998777888899999999999999742 2345567788899999999999999998875310
Q ss_pred hhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEE
Q 002392 678 TSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQI 757 (928)
Q Consensus 678 ~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~ 757 (928)
+..|++++|+|+++++|++|++++++|+.|+++||+++|+|||+..||.++|+++||..+..
T Consensus 471 ---------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~--- 532 (885)
T 3b8c_A 471 ---------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--- 532 (885)
T ss_dssp ---------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS---
T ss_pred ---------------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC---
Confidence 23578999999999999999999999999999999999999999999999999999964210
Q ss_pred EEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHh-HHHHHHHHHHhhccCC
Q 002392 758 VITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL-DKKLEKMFLDLAIDCA 836 (928)
Q Consensus 758 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~-~~~~~~~~~~~~~~~~ 836 (928)
... ++.|..++..+ +.++.+.+ . +
T Consensus 533 --~~~-----------------------------------------------~l~g~~~~~~~~~~~l~~~~----~--~ 557 (885)
T 3b8c_A 533 --PSS-----------------------------------------------ALLGTHKDANLASIPVEELI----E--K 557 (885)
T ss_dssp --TTS-----------------------------------------------SCCBGGGGTTSCCSCHHHHH----H--T
T ss_pred --Ccc-----------------------------------------------eeeccccccccchhHHHHHH----h--h
Confidence 000 00111111000 00011111 1 1
Q ss_pred ceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhhhhhhc
Q 002392 837 SVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHG 914 (928)
Q Consensus 837 ~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~lll~~G 914 (928)
..+++|++|+||..+|+.+++.|+.|+|+|||.||++||++||+||||++. .+.|+++||+++.+ |..+..+ +.+|
T Consensus 558 ~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~g-td~ak~aADivl~~~~~~~I~~a-i~~g 635 (885)
T 3b8c_A 558 ADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADA-TDAARGASDIVLTEPGLSVIISA-VLTS 635 (885)
T ss_dssp SCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSS-HHHHGGGCSSCCSSCSHHHHTHH-HHTH
T ss_pred CcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCc-cHHHHHhcceeeccCchhHHHHH-HHHH
Confidence 248999999999999999988899999999999999999999999999642 23389999999997 5558888 9999
Q ss_pred hhhhhhccccccc
Q 002392 915 HWCYRRISMMVKL 927 (928)
Q Consensus 915 r~~~~~i~~~i~y 927 (928)
|++|+|+++++.|
T Consensus 636 R~~~~ni~~~i~~ 648 (885)
T 3b8c_A 636 RAIFQRMKNYTIY 648 (885)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999887
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-71 Score=658.92 Aligned_cols=481 Identities=20% Similarity=0.242 Sum_probs=393.4
Q ss_pred HHHHHHhHHHHHHHHHhhhhHHH------hcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCce
Q 002392 113 VIGATMAKEGVEDWRRRKQDIEA------NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGI 186 (928)
Q Consensus 113 vl~i~~~~~~~~~~~r~~~~~~~------n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~ 186 (928)
++++..+..++|.+.++++.+.+ .+.+++|+|+||++++|++++|+|||+|+|++||+|||||+|++ |.
T Consensus 194 ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~-----G~ 268 (736)
T 3rfu_A 194 ITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE-----GR 268 (736)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS-----SC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE-----Cc
Confidence 33344455566666666654333 37888888769999999999999999999999999999999999 88
Q ss_pred EEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCC
Q 002392 187 CYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTD 266 (928)
Q Consensus 187 ~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~ 266 (928)
++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 269 ~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~-------------------- 301 (736)
T 3rfu_A 269 SFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS-------------------- 301 (736)
T ss_dssp EEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC--------------------
T ss_pred eEeeecccCCccccEEeccCCcC---------------------------CCceEeccce--------------------
Confidence 99999999999999999987654 8899988887
Q ss_pred eEEEEEEEecCccc---eeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCC
Q 002392 267 YVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDD 343 (928)
Q Consensus 267 ~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~ 343 (928)
+.++|++||.+|. +.+....++.+++|+|+.+++++.++++++++++++++++|.++.... .|
T Consensus 302 -~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------~~------ 367 (736)
T 3rfu_A 302 -FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------AL------ 367 (736)
T ss_dssp -CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS-------ST------
T ss_pred -EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-------hH------
Confidence 9999999999994 556666777888999999999999999999999999988876654211 12
Q ss_pred CCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEE
Q 002392 344 ATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTI 423 (928)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i 423 (928)
...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++++|
T Consensus 368 --------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 368 --------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp --------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCCEE
T ss_pred --------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHHHhcCCCEE
Confidence 1268889999999999999999999999999988 8899999999999999999999
Q ss_pred EecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhc
Q 002392 424 LSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMN 503 (928)
Q Consensus 424 ~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (928)
|||||||||+|+|+|.++...+.. .
T Consensus 424 ~fDKTGTLT~g~~~v~~i~~~~~~----~--------------------------------------------------- 448 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIVTDDFV----E--------------------------------------------------- 448 (736)
T ss_dssp EECCBTTTBCSSCEEEEEEESSSC----H---------------------------------------------------
T ss_pred EEeCCCCCcCCceEEEEEEecCCC----H---------------------------------------------------
Confidence 999999999999999998732210 0
Q ss_pred ccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCccccc
Q 002392 504 GQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKV 583 (928)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 583 (928)
.+++...+.+ ++.++||++.|+++++++.|+.+.
T Consensus 449 ------------~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~-------------------- 482 (736)
T 3rfu_A 449 ------------DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG-------------------- 482 (736)
T ss_dssp ------------HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC--------------------
T ss_pred ------------HHHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCcc--------------------
Confidence 0122222211 123579999999999998775432
Q ss_pred ceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCH
Q 002392 584 NRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 663 (928)
Q Consensus 584 ~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~ 663 (928)
...+|++.+++. +.... +|+. +.+|+++.+.+.... .....+.++.++.+|+|++++|
T Consensus 483 -------~~~~f~~~~g~g-v~~~~-~g~~--~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~vl~va------ 540 (736)
T 3rfu_A 483 -------SVEAFEAPTGKG-VVGQV-DGHH--VAIGNARLMQEHGGD-----NAPLFEKADELRGKGASVMFMA------ 540 (736)
T ss_dssp -------CCSCCCCCTTTE-EEECS-SSSC--EEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTCEEEEEE------
T ss_pred -------CcccccccCCce-EEEEE-CCEE--EEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcCCeEEEEE------
Confidence 123566665543 22222 3332 345999877654322 2345667889999999999999
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHH
Q 002392 664 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 743 (928)
Q Consensus 664 ~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~i 743 (928)
.|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|..+
T Consensus 541 ---------------------------------~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~i 587 (736)
T 3rfu_A 541 ---------------------------------VDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAV 587 (736)
T ss_dssp ---------------------------------ETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHH
T ss_pred ---------------------------------ECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 46789999999999999999999999999999999999999999999
Q ss_pred HHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHH
Q 002392 744 GYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKK 823 (928)
Q Consensus 744 a~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~ 823 (928)
|+++||.
T Consensus 588 a~~lgi~------------------------------------------------------------------------- 594 (736)
T 3rfu_A 588 AGTLGIK------------------------------------------------------------------------- 594 (736)
T ss_dssp HHHHTCC-------------------------------------------------------------------------
T ss_pred HHHcCCC-------------------------------------------------------------------------
Confidence 9999983
Q ss_pred HHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc-
Q 002392 824 LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ- 902 (928)
Q Consensus 824 ~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~- 902 (928)
.++++++|++|..+++.++..|+.|+|+|||.||++||++||+||||++. .+.++++||+++.+
T Consensus 595 --------------~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g-~d~a~~~AD~vl~~~ 659 (736)
T 3rfu_A 595 --------------KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTG-TDVAIESAGVTLLHG 659 (736)
T ss_dssp --------------CEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSS-CSHHHHHCSEEECSC
T ss_pred --------------EEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCc-cHHHHHhCCEEEccC
Confidence 17889999999999999988899999999999999999999999999643 23399999999985
Q ss_pred -cccchhhhhhhchhhhhhcccccccC
Q 002392 903 -FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 903 -f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
++.+.++ +.+||..|+++++++.|+
T Consensus 660 ~~~~i~~a-i~~sr~t~~~i~qnl~~a 685 (736)
T 3rfu_A 660 DLRGIAKA-RRLSESTMSNIRQNLFFA 685 (736)
T ss_dssp CSTTHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 6668888 999999999999998773
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-69 Score=640.94 Aligned_cols=482 Identities=20% Similarity=0.250 Sum_probs=388.6
Q ss_pred CchhhHHHHHHHHHHHhHHHHHHHHHhhh------hHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEE
Q 002392 103 APSVLAPLIVVIGATMAKEGVEDWRRRKQ------DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLL 176 (928)
Q Consensus 103 ~~~~~~~l~~vl~i~~~~~~~~~~~r~~~------~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~i 176 (928)
++.....+++++ .+.+++|++.++++ ...+.+.+++|+| ||++++|++++|+|||+|.|++||+|||||+
T Consensus 95 ~~~~~~~i~~~~---~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r-~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~ 170 (645)
T 3j08_A 95 FYETSVLLLAFL---LLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIR-DGKEIAVPVEEVAVGDIVIVRPGEKIPVDGV 170 (645)
T ss_dssp CCCSHHHHHHHH---HHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEE-TTEEEEEEGGGCCTTCEEEECTTCBCCSEEE
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEeeEEE
Confidence 334444444444 45566777777654 3344578999999 9999999999999999999999999999999
Q ss_pred EEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCccccc
Q 002392 177 LLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQIL 256 (928)
Q Consensus 177 lL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~ 256 (928)
|++ |.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 171 vl~-----G~~~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~---------- 208 (645)
T 3j08_A 171 VVE-----GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV---------- 208 (645)
T ss_dssp EEE-----CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC----------
T ss_pred EEE-----CcEEEEcccccCCCCceecCCCCEe---------------------------eccEEEecCc----------
Confidence 999 8899999999999999999876543 7788777776
Q ss_pred ccCceeecCCeEEEEEEEecCcc---ceeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCc
Q 002392 257 LRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGK 333 (928)
Q Consensus 257 ~rgs~l~~t~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 333 (928)
+.++|++||.+| ++.+....++.+++++++.+++++.++++++++++++++++|.++...
T Consensus 209 -----------~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~------ 271 (645)
T 3j08_A 209 -----------LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA------ 271 (645)
T ss_dssp -----------EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC------
T ss_pred -----------EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------
Confidence 999999999999 566777888889999999999999999999988888887765433210
Q ss_pred ccccccCCCCCCcccCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccc
Q 002392 334 IRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNL 413 (928)
Q Consensus 334 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~ 413 (928)
+|.. .+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.
T Consensus 272 --~~~~--------------------~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~ 319 (645)
T 3j08_A 272 --PLLF--------------------AFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADA 319 (645)
T ss_dssp --SCCC--------------------TTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTH
T ss_pred --cHHH--------------------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchH
Confidence 1211 45667888899999999999999999999988 889999999999
Q ss_pred hhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCC
Q 002392 414 NEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKG 493 (928)
Q Consensus 414 ~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (928)
+|+||++++||||||||||+|+|+|.+++..+..
T Consensus 320 lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~---------------------------------------------- 353 (645)
T 3j08_A 320 LEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---------------------------------------------- 353 (645)
T ss_dssp HHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC----------------------------------------------
T ss_pred HHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC----------------------------------------------
Confidence 9999999999999999999999999999765310
Q ss_pred ccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEE
Q 002392 494 FNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLH 573 (928)
Q Consensus 494 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~ 573 (928)
..+++...+.|+. .++||++.|+++++++.|+.+....
T Consensus 354 ---------------------~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~~------- 391 (645)
T 3j08_A 354 ---------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE------- 391 (645)
T ss_dssp ---------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC-------
T ss_pred ---------------------HHHHHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCcc-------
Confidence 0134444554432 2469999999999999887542211
Q ss_pred ecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCee
Q 002392 574 ELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRT 653 (928)
Q Consensus 574 ~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~ 653 (928)
.++ +...+ ++.. . .+.+|+++.+.+.. ....+.+.+.++.++.+|+|+
T Consensus 392 ------------~~~--------~~~g~-g~~~----~---~v~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~ 439 (645)
T 3j08_A 392 ------------KVE--------VIAGE-GVVA----D---GILVGNKRLMEDFG----VAVSNEVELALEKLEREAKTA 439 (645)
T ss_dssp ------------CCE--------EETTT-EEEE----T---TEEEECHHHHHHTT----CCCCHHHHHHHHHHHTTTCCC
T ss_pred ------------ceE--------EecCC-ceEE----E---EEEECCHHHHHhcC----CCccHHHHHHHHHHHhcCCeE
Confidence 000 00000 0000 1 23458876654422 123456677888999999999
Q ss_pred eEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEc
Q 002392 654 LVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLT 733 (928)
Q Consensus 654 l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilT 733 (928)
+++| .|++++|+++++|++|++++++|+.|+++||+++|+|
T Consensus 440 l~va---------------------------------------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~T 480 (645)
T 3j08_A 440 VIVA---------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 480 (645)
T ss_dssp EEEE---------------------------------------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEE---------------------------------------ECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEe
Confidence 9999 4789999999999999999999999999999999999
Q ss_pred CCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEcc
Q 002392 734 GDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDG 813 (928)
Q Consensus 734 GD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g 813 (928)
||+..+|..+|+++|+.
T Consensus 481 Gd~~~~a~~ia~~lgi~--------------------------------------------------------------- 497 (645)
T 3j08_A 481 GDNWRSAEAISRELNLD--------------------------------------------------------------- 497 (645)
T ss_dssp SSCHHHHHHHHHHHTCS---------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHcCCC---------------------------------------------------------------
Confidence 99999999999999983
Q ss_pred chhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhh
Q 002392 814 KSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAV 893 (928)
Q Consensus 814 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak 893 (928)
.++++++|++|..+++.++.. +.|+|+|||.||++||+.||+||+|++. .+.++
T Consensus 498 ------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g-~~~a~ 551 (645)
T 3j08_A 498 ------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSG-SDVAV 551 (645)
T ss_dssp ------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCC-SCCSS
T ss_pred ------------------------EEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCC-cHHHH
Confidence 288999999999999999665 8999999999999999999999999633 23389
Q ss_pred hcCcEeecc--cccchhhhhhhchhhhhhcccccccC
Q 002392 894 MSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 894 ~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
++||+++.+ ++.+..+ +.+||+.|+++++++.|+
T Consensus 552 ~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a 587 (645)
T 3j08_A 552 ESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWA 587 (645)
T ss_dssp CCSSSEESSCCTTHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999964 6668888 889999999999998773
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-69 Score=646.74 Aligned_cols=470 Identities=20% Similarity=0.263 Sum_probs=384.3
Q ss_pred HHhHHHHHHHHHhhhh------HHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEE
Q 002392 117 TMAKEGVEDWRRRKQD------IEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190 (928)
Q Consensus 117 ~~~~~~~~~~~r~~~~------~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd 190 (928)
..+.+++|++.++++. ..+.+.+++|+| ||++++|++++|+|||+|.|++||+|||||+|++ |.++||
T Consensus 184 ~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r-~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~-----G~~~Vd 257 (723)
T 3j09_A 184 LLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIR-DGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----GESYVD 257 (723)
T ss_dssp HHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEE-TTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE-----CCeEEe
Confidence 3455667777766552 333578999999 9999999999999999999999999999999999 889999
Q ss_pred eccCCCCccceeeccchhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEE
Q 002392 191 TMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYG 270 (928)
Q Consensus 191 ~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~g 270 (928)
||+|||||.|+.|.+++.. |+||++.+|. +.+
T Consensus 258 eS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~---------------------~~~ 289 (723)
T 3j09_A 258 ESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV---------------------LKI 289 (723)
T ss_dssp CHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC---------------------EEE
T ss_pred cccccCCCcceeecCCCee---------------------------ccceEEecCc---------------------EEE
Confidence 9999999999999876543 7788777766 999
Q ss_pred EEEEecCcc---ceeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccCCCCCCcc
Q 002392 271 VVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVF 347 (928)
Q Consensus 271 vVv~tG~~T---ki~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 347 (928)
+|++||.+| ++.+....++.+++++++.+++++.++++++++++++++++|.++... +|.
T Consensus 290 ~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~--------- 352 (723)
T 3j09_A 290 RATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLL--------- 352 (723)
T ss_dssp EEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC--------TTC---------
T ss_pred EEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHH---------
Confidence 999999999 566777888889999999999999999999988888877665432210 121
Q ss_pred cCCCCchhHHHHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecC
Q 002392 348 YDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDK 427 (928)
Q Consensus 348 ~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DK 427 (928)
..+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++++|||||
T Consensus 353 -----------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 353 -----------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp -----------CSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred -----------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHhhcCCEEEEcC
Confidence 157788999999999999999999999999988 88999999999999999999999999
Q ss_pred CCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCcccccCCccCCccccchhhhcccCC
Q 002392 428 TGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWV 507 (928)
Q Consensus 428 TGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 507 (928)
|||||+|+|+|.+++..+..
T Consensus 412 TGTLT~g~~~v~~~~~~~~~------------------------------------------------------------ 431 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVPLNGD------------------------------------------------------------ 431 (723)
T ss_dssp HHHTSCSCCEEEEEEESSSC------------------------------------------------------------
T ss_pred CCccccCceEEEEEEeCCCC------------------------------------------------------------
Confidence 99999999999999765310
Q ss_pred CCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEE
Q 002392 508 NEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVY 587 (928)
Q Consensus 508 ~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (928)
..+++...+.|.. .++||++.|+++++++.|+.+.... .+
T Consensus 432 -------~~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~~-------------------~~ 471 (723)
T 3j09_A 432 -------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE-------------------KV 471 (723)
T ss_dssp -------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC-------------------CC
T ss_pred -------HHHHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCcc-------------------ce
Confidence 0134444444422 2469999999999999887542211 01
Q ss_pred EEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHH
Q 002392 588 ELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (928)
Q Consensus 588 ~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~ 667 (928)
+ +...+ ++.. . .+.+|+++.+.+... ...+.+.+.++.++.+|+|++++|
T Consensus 472 ~--------~~~g~-g~~~----~---~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~va---------- 521 (723)
T 3j09_A 472 E--------VIAGE-GVVA----D---GILVGNKRLMEDFGV----AVSNEVELALEKLEREAKTAVIVA---------- 521 (723)
T ss_dssp E--------EETTT-EEEE----T---TEEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTCEEEEEE----------
T ss_pred E--------EecCC-ceEE----E---EEEECCHHHHHhcCC----CccHHHHHHHHHHHhcCCeEEEEE----------
Confidence 0 00000 0000 1 234588766544321 233567778889999999999999
Q ss_pred HHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 668 ~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
.|++++|+++++|++|++++++|+.|+++||+++|+|||+..+|..+|+++
T Consensus 522 -----------------------------~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~l 572 (723)
T 3j09_A 522 -----------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 572 (723)
T ss_dssp -----------------------------ETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred -----------------------------ECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc
Confidence 478999999999999999999999999999999999999999999999999
Q ss_pred CCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHH
Q 002392 748 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 827 (928)
Q Consensus 748 gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~ 827 (928)
|+.
T Consensus 573 gi~----------------------------------------------------------------------------- 575 (723)
T 3j09_A 573 NLD----------------------------------------------------------------------------- 575 (723)
T ss_dssp TCS-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 983
Q ss_pred HHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecC-CcchhhhhcCcEeecc--cc
Q 002392 828 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG-VEGMQAVMSSDYAIAQ--FR 904 (928)
Q Consensus 828 ~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g-~e~~~ak~aAD~vi~~--f~ 904 (928)
.++++++|++|..+++.++.. +.|+|+|||.||++||+.||+||||++ ++. ++++||+++.+ ++
T Consensus 576 ----------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~ 642 (723)
T 3j09_A 576 ----------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLR 642 (723)
T ss_dssp ----------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCC--SSCCSSEECSSCCTT
T ss_pred ----------EEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHH--HHHhCCEEEeCCCHH
Confidence 288999999999999999665 899999999999999999999999953 343 89999999964 66
Q ss_pred cchhhhhhhchhhhhhcccccccC
Q 002392 905 FLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 905 ~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
.+.++ +.+||+.|+++++++.|+
T Consensus 643 ~i~~~-i~~~r~~~~~i~~nl~~a 665 (723)
T 3j09_A 643 DVVAA-IQLSRKTMSKIKQNIFWA 665 (723)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHH
Confidence 68888 889999999999998873
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=8.4e-27 Score=248.38 Aligned_cols=138 Identities=21% Similarity=0.297 Sum_probs=119.2
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
+-.+.|.+.+.|+++|++.++|+.|++.|++++|+||++..++..+++.+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 456889999999999999999999999999999999999999999999988731
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~ 857 (928)
+|..+.|+.|..+++.++.
T Consensus 178 -------------------------------------------------------------~f~~~~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 178 -------------------------------------------------------------YYSNLSPEDKVRIIEKLKQ 196 (263)
Confidence 3444458899999999876
Q ss_pred CCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEee--cccccchhhhhhhchhhhhhcccc
Q 002392 858 TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRISMM 924 (928)
Q Consensus 858 ~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi--~~f~~l~~lll~~Gr~~~~~i~~~ 924 (928)
.+..|+|||||.||++|++.||+||++++. ...+...||+++ .++..|..+ +..+|..+++++++
T Consensus 197 ~~~~~~~VGD~~~D~~aa~~Agv~va~g~~-~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 197 NGNKVLMIGDGVNDAAALALADVSVAMGNG-VDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPSN 263 (263)
Confidence 677899999999999999999999999543 223678899999 678889888 89999999998864
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=216.19 Aligned_cols=272 Identities=22% Similarity=0.266 Sum_probs=194.4
Q ss_pred CCCCceeecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCC
Q 002392 402 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLN 481 (928)
Q Consensus 402 ~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (928)
+++|+++|+++.+|.|++++.|+||||||||.+.+.+..+...+. . +
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----~--~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----D--E--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----C--H---------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----C--H---------------------------
Confidence 889999999999999999999999999999999999988765431 0 0
Q ss_pred CcccccCCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcE
Q 002392 482 GNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQ 561 (928)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~ 561 (928)
.+++. +|..+. ..+.||.+.|+.++++..|+.
T Consensus 61 ----------------------------------~~~l~---~~~~~e-----------~~s~hp~~~a~~~~~~~~g~~ 92 (287)
T 3a1c_A 61 ----------------------------------RELLR---LAAIAE-----------RRSEHPIAEAIVKKALEHGIE 92 (287)
T ss_dssp ----------------------------------HHHHH---HHHHHT-----------TTCCSHHHHHHHHHHHHTTCC
T ss_pred ----------------------------------HHHHH---HHHHHh-----------hcCCCHHHHHHHHHHHhcCCC
Confidence 02222 222221 124799999999999998875
Q ss_pred EEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHH
Q 002392 562 FFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 641 (928)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~ 641 (928)
.... ..+. ...+ +++.. .. +.+|.++.+.+... ..++.+..
T Consensus 93 ~~~~--~~~~-~~~G-------------------------~~~~~----~~---~~~g~~~~~~~~~~----~~~~~~~~ 133 (287)
T 3a1c_A 93 LGEP--EKVE-VIAG-------------------------EGVVA----DG---ILVGNKRLMEDFGV----AVSNEVEL 133 (287)
T ss_dssp CCCC--SCEE-EETT-------------------------TEEEE----TT---EEEECHHHHHHTTC----CCCHHHHH
T ss_pred cccc--ccce-eecC-------------------------CCeEE----EE---EEECCHHHHHhcCC----CccHHHHH
Confidence 3210 0000 0000 00000 11 23465443322111 11123445
Q ss_pred HHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHH
Q 002392 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDK 721 (928)
Q Consensus 642 ~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~ 721 (928)
.++.+..+|.+++++++ +..++|.+..+++++|++.++|+.
T Consensus 134 ~~~~~~~~g~~~i~~~~---------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~ 174 (287)
T 3a1c_A 134 ALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQE 174 (287)
T ss_dssp HHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCTTHHHHHHH
T ss_pred HHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHH
Confidence 56778889999999883 567899999999999999999999
Q ss_pred HHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccc
Q 002392 722 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAK 801 (928)
Q Consensus 722 l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (928)
|+++|++++|+||++...+..+++.+|+..
T Consensus 175 L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------------------------- 204 (287)
T 3a1c_A 175 LKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------------------------------------- 204 (287)
T ss_dssp HHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------------------------
T ss_pred HHHCCCeEEEEeCCCHHHHHHHHHHhCCce--------------------------------------------------
Confidence 999999999999999999999999988731
Q ss_pred cccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCee
Q 002392 802 ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 881 (928)
Q Consensus 802 ~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vG 881 (928)
+|..+.|..|...++.+... ..+++|||+.||+.|.+.||+|
T Consensus 205 -------------------------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~ 246 (287)
T 3a1c_A 205 -------------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG 246 (287)
T ss_dssp -------------------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE
T ss_pred -------------------------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee
Confidence 34445588999999998545 8899999999999999999999
Q ss_pred EEecCCcchhhhhcCcEee--cccccchhhhhhhchhhhhhcc
Q 002392 882 VGISGVEGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRIS 922 (928)
Q Consensus 882 Iam~g~e~~~ak~aAD~vi--~~f~~l~~lll~~Gr~~~~~i~ 922 (928)
|++++... .++..||+++ .++..+..+ +..+|..+++|+
T Consensus 247 v~~~~~~~-~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 247 IAVGSGSD-VAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp EEECCCSC-CSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred EEeCCCCH-HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 99964322 2567899999 778888887 889999998875
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-20 Score=201.35 Aligned_cols=272 Identities=22% Similarity=0.262 Sum_probs=186.9
Q ss_pred eecccchhhccceeEEEecCCCccccceeEEEEEEEcCeeccCcchHHHHHHHHhhCCcccccCCCCCCCCCCCCccccc
Q 002392 408 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVES 487 (928)
Q Consensus 408 v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (928)
+|++..+|.|++++.|+||++||||.|+|.+..+...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----~------------------------------------ 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----S------------------------------------ 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS----C------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC----C------------------------------------
Confidence 478899999999999999999999999999998865432 0
Q ss_pred CCccCCccccchhhhcccCCCCCchhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecC
Q 002392 488 GKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQ 567 (928)
Q Consensus 488 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~ 567 (928)
..+++..++.+.. .+.+|...++.++++..|+.....
T Consensus 41 ---------------------------~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~~-- 77 (280)
T 3skx_A 41 ---------------------------EDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTEV-- 77 (280)
T ss_dssp ---------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCCC--
T ss_pred ---------------------------HHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCCc--
Confidence 0123333333221 135888999999999988653210
Q ss_pred CeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHH
Q 002392 568 TSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYA 647 (928)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~ 647 (928)
..+. .++ .+.+...+ ++.. +..|.++.+........ ..+..+.
T Consensus 78 -----------------~~~~---~~~----g~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~ 120 (280)
T 3skx_A 78 -----------------EEFR---AIP----GKGVEGIV---NGRR--YMVVSPGYIRELGIKTD--------ESVEKLK 120 (280)
T ss_dssp -----------------EEEE---EET----TTEEEEEE---TTEE--EEEECHHHHHHTTCCCC--------TTHHHHH
T ss_pred -----------------ccee---ecC----CCEEEEEE---CCEE--EEEecHHHHHHcCCCch--------HHHHHHH
Confidence 1111 000 01111111 1221 22366555543322111 2344567
Q ss_pred hcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCChHHHHHHHHHcCC
Q 002392 648 EAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGI 727 (928)
Q Consensus 648 ~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~~~~aI~~l~~aGI 727 (928)
..+.+.+.++ .+..++|.+.+.+++++++.++++.|++.|+
T Consensus 121 ~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 161 (280)
T 3skx_A 121 QQGKTVVFIL---------------------------------------KNGEVSGVIALADRIRPESREAISKLKAIGI 161 (280)
T ss_dssp TTTCEEEEEE---------------------------------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTC
T ss_pred hCCCeEEEEE---------------------------------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCC
Confidence 7888888877 3567899999999999999999999999999
Q ss_pred eEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceE
Q 002392 728 KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTF 807 (928)
Q Consensus 728 kv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (928)
++.|+||++...+..+++.+|+..
T Consensus 162 ~~~i~T~~~~~~~~~~~~~~gl~~-------------------------------------------------------- 185 (280)
T 3skx_A 162 KCMMLTGDNRFVAKWVAEELGLDD-------------------------------------------------------- 185 (280)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCSE--------------------------------------------------------
T ss_pred EEEEEeCCCHHHHHHHHHHcCChh--------------------------------------------------------
Confidence 999999999999999999998831
Q ss_pred EEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCC
Q 002392 808 GLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGV 887 (928)
Q Consensus 808 ~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~ 887 (928)
.+..+.|.+|...++.+.... .++||||+.||++|++.||+||+|++.
T Consensus 186 -------------------------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~ 233 (280)
T 3skx_A 186 -------------------------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAG 233 (280)
T ss_dssp -------------------------------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCC
T ss_pred -------------------------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCC
Confidence 445566778998888884433 579999999999999999999999654
Q ss_pred cchhhhhcCcEee--cccccchhhhhhhchhhhhhcccccccC
Q 002392 888 EGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 888 e~~~ak~aAD~vi--~~f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
.. .++..||+++ .++..+..+ +..+|..++++++++.|+
T Consensus 234 ~~-~~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~ 274 (280)
T 3skx_A 234 TD-VAVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWS 274 (280)
T ss_dssp SS-SCCCSSSEECSSCCTHHHHHH-HHHHHTCCC---------
T ss_pred cH-HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 33 2788999999 567778888 789999999999998875
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-21 Score=177.37 Aligned_cols=99 Identities=23% Similarity=0.289 Sum_probs=90.5
Q ss_pred hhhHHHhcceeEEEccCCeEEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhh
Q 002392 130 KQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEAT 209 (928)
Q Consensus 130 ~~~~~~n~~~~~v~r~~g~~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~ 209 (928)
+++..+.+.+++|+| +|+++.|++++|+|||+|.|++||+|||||+|++ |.++||||+|||||.|+.|.+++.
T Consensus 4 ~~L~~l~p~~a~v~r-~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~-----g~~~vdeS~LTGEs~pv~k~~g~~- 76 (113)
T 2hc8_A 4 KKLVGLQAKTAVVIR-DGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----GESYVDESMISGEPVPVLKSKGDE- 76 (113)
T ss_dssp HHHHHHSCSEEEEEE-TTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----CCEEEECHHHHCCSSCEEECTTCE-
T ss_pred HHHhcCCCCEEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ceEEEEccccCCCCccEEECCCCE-
Confidence 345677899999999 9999999999999999999999999999999999 789999999999999999998753
Q ss_pred ccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcccee
Q 002392 210 NHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM 282 (928)
Q Consensus 210 ~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~ 282 (928)
.|+||++.+|. +.++|++||.+|.+.
T Consensus 77 --------------------------v~aGt~~~~G~---------------------~~~~V~~~g~~T~~~ 102 (113)
T 2hc8_A 77 --------------------------VFGATINNTGV---------------------LKIRATRVGGETLLA 102 (113)
T ss_dssp --------------------------ECTTCEECSSC---------------------EEEEEEECGGGSHHH
T ss_pred --------------------------EEeCCEEeece---------------------EEEEEEEecCcCHHH
Confidence 38999999988 999999999999653
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.7e-20 Score=168.70 Aligned_cols=97 Identities=19% Similarity=0.252 Sum_probs=86.5
Q ss_pred hHHHhcceeEEEccCCe------EEEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeecc
Q 002392 132 DIEANNRKVKVYGQDHT------FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRS 205 (928)
Q Consensus 132 ~~~~n~~~~~v~r~~g~------~~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~ 205 (928)
+..+.+.+++|+| +|. ++.|++++|+|||+|.|++||+|||||+|++ |.+.||||+|||||.|+.|.+
T Consensus 12 L~~l~p~~a~v~r-~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~-----g~~~vdeS~LTGEs~pv~k~~ 85 (124)
T 2kij_A 12 LISLQATEATIVT-LDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIE-----GHSMVDESLITGEAMPVAKKP 85 (124)
T ss_dssp HHHTCCSEEEEEE-CSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECS-----CCCEEECTTTTCCSSCEECCT
T ss_pred HhccCCCEEEEEE-CCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEE-----ccEEEEeccccCCCccEEeCC
Confidence 4555689999998 653 7899999999999999999999999999999 778999999999999999998
Q ss_pred chhhccCCChhhhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcccee
Q 002392 206 LEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM 282 (928)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~ 282 (928)
++.. |+||++.+|. +.++|+.||.+|.+.
T Consensus 86 g~~v---------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~~ 114 (124)
T 2kij_A 86 GSTV---------------------------IAGSINQNGS---------------------LLICATHVGADTTLS 114 (124)
T ss_dssp TEEE---------------------------CTTCEEESSC---------------------CEEEECSCTTTCHHH
T ss_pred CCEE---------------------------EcCCEEeeeE---------------------EEEEEEEecccCHHH
Confidence 6543 8999999988 999999999999653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.73 E-value=8.1e-19 Score=171.71 Aligned_cols=140 Identities=21% Similarity=0.261 Sum_probs=108.9
Q ss_pred HHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeeccc
Q 002392 517 KFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFT 596 (928)
Q Consensus 517 ~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~ 596 (928)
+.+...++|+..... ..+|.|.|+++++...++. .....|+++..+||+
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~--------------------~~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESAR--------------------SLASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHH--------------------HHHHHSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChh--------------------hhhhcCeEEeeEecC
Confidence 566777777644321 2599999999987543210 013568999999999
Q ss_pred CCcceeEEEEEcCCCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHH
Q 002392 597 SSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (928)
Q Consensus 597 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~ 667 (928)
|+|||||++++.++|+.++|+||||+.|+++|+.. +++.++.+.+.++.|+.+|+|||++|||.++..+..
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~ 145 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD 145 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC
T ss_pred cccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc
Confidence 99999999999888889999999999999999852 345577889999999999999999999998754210
Q ss_pred HHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeeccc
Q 002392 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDK 710 (928)
Q Consensus 668 ~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~ 710 (928)
. ....|+||+|+|++||-|.
T Consensus 146 ------------~-----------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 ------------Y-----------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp ------------C-----------CGGGSCSEEEEEEEEEEC-
T ss_pred ------------c-----------CccccCCcEEEehhccccc
Confidence 0 0235899999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.65 E-value=4.7e-17 Score=176.53 Aligned_cols=143 Identities=13% Similarity=0.102 Sum_probs=102.2
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHH
Q 002392 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 786 (928)
Q Consensus 707 ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (928)
..+++||+++++++.|+++|+++.|+||+...++.++++++|+..++..++.......
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~---------------------- 195 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFD---------------------- 195 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEEC----------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEc----------------------
Confidence 3579999999999999999999999999999999999999999766544332211000
Q ss_pred HHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEc
Q 002392 787 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIG 866 (928)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiG 866 (928)
.......+.+... ..+++..|.+|...+..++..+..|+|+|
T Consensus 196 -----------------~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~~~~~v~~vG 237 (297)
T 4fe3_A 196 -----------------ENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLKDNSNIILLG 237 (297)
T ss_dssp -----------------TTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTTTCCEEEEEE
T ss_pred -----------------ccceeEecccccc---------------------chhhcccHHHHHHHHHHhhccCCEEEEEe
Confidence 0000011111110 13445567778778888877788999999
Q ss_pred CChhcHHHH---HhCCeeEEec--CCc----chhhhhcCcEeeccccc--chhh
Q 002392 867 DGANDVGML---QEADIGVGIS--GVE----GMQAVMSSDYAIAQFRF--LERL 909 (928)
Q Consensus 867 DG~ND~~ml---~~A~vGIam~--g~e----~~~ak~aAD~vi~~f~~--l~~l 909 (928)
||.||++|+ ..||+||+|+ +.+ ...++++||+||+++++ +.+.
T Consensus 238 DGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 238 DSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp SSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred CcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 999999995 4999999985 222 22369999999998655 5554
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.19 E-value=5.2e-11 Score=127.53 Aligned_cols=75 Identities=31% Similarity=0.505 Sum_probs=54.0
Q ss_pred eeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccccc------chhh
Q 002392 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF------LERL 909 (928)
Q Consensus 842 r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~------l~~l 909 (928)
...|. .|...++.+ +..| ..|+||||+.||++|++.|++||+|+++... ++++||+|+.+... |.++
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~e~Gv~~~i~~~ 268 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEP-VKKAADYITLTNDEDGVAEAIERI 268 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCSEECCCGGGTHHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHH-HHHhCCEEcCCCCCcHHHHHHHHH
Confidence 44454 799998888 5555 4599999999999999999999999776543 89999999986332 6666
Q ss_pred hhhhchhh
Q 002392 910 LLVHGHWC 917 (928)
Q Consensus 910 ll~~Gr~~ 917 (928)
+..+|+..
T Consensus 269 ~~~~~~~~ 276 (279)
T 4dw8_A 269 FNVEGHHH 276 (279)
T ss_dssp C-------
T ss_pred Hhcccccc
Confidence 67777643
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=7.4e-11 Score=126.29 Aligned_cols=204 Identities=13% Similarity=0.129 Sum_probs=97.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+.+.++|++++++|++++++|||+...+..+.+.+|+..+....+..+|. .....-.+......+.......+...
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQTISGKVLTNHSLTYEDYIDLEAW 100 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEEETTSCEEEECCCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEECCCCCEEEecCCCHHHHHHHHHH
Confidence 46788999999999999999999999999999999999976443344444443 11000000000000000000111111
Q ss_pred HHhh----------------------------hhhccc-------cccccceEEEEEccch--hhHHhHHHHHHHHHH-h
Q 002392 790 IREG----------------------------ISQVNS-------AKESKVTFGLVIDGKS--LDFALDKKLEKMFLD-L 831 (928)
Q Consensus 790 ~~~~----------------------------~~~~~~-------~~~~~~~~~~vi~g~~--l~~~~~~~~~~~~~~-~ 831 (928)
+... ...... -........+.+.+.. +.. ..+.+...+.. +
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~-~~~~l~~~~~~~~ 179 (279)
T 3mpo_A 101 ARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQ-VKANMPQDFKDRF 179 (279)
T ss_dssp HHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHH-HHHHCCHHHHHHE
T ss_pred HHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHH-HHHHHHHHhCCCE
Confidence 1000 000000 0000011112222221 111 11111111211 1
Q ss_pred hccCCceEEEeeCc--ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc-
Q 002392 832 AIDCASVICCRSSP--KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR- 904 (928)
Q Consensus 832 ~~~~~~~i~~r~~p--~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~- 904 (928)
........+....| ..|...++.+ +..| ..|+||||+.||++|++.|++||+|+++... +|.+||+|+.+..
T Consensus 180 ~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 180 SVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE-VKEAAQAVTLTNAE 258 (279)
T ss_dssp EEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH-HHHHCSCBC-----
T ss_pred EEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH-HHHhcceeccCCCc
Confidence 11111112334444 3699999888 6665 4699999999999999999999999776544 8999999987532
Q ss_pred -----cchhhhhhhchh
Q 002392 905 -----FLERLLLVHGHW 916 (928)
Q Consensus 905 -----~l~~lll~~Gr~ 916 (928)
.|.++++-+|+.
T Consensus 259 ~Gv~~~i~~~~~~~~~~ 275 (279)
T 3mpo_A 259 NGVAAAIRKYALNEGHH 275 (279)
T ss_dssp -CHHHHHC---------
T ss_pred cHHHHHHHHHhcccCcc
Confidence 266666666664
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.15 E-value=6.9e-11 Score=118.53 Aligned_cols=132 Identities=11% Similarity=0.097 Sum_probs=103.3
Q ss_pred eEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHH
Q 002392 700 ILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 779 (928)
Q Consensus 700 ~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 779 (928)
..++.+.++|.+ +|+.|+++|+++.|+||++...+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 445555555554 9999999999999999999999999999999831
Q ss_pred HHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcC
Q 002392 780 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT 858 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~ 858 (928)
++.. +..|...++.+ +..
T Consensus 88 -----------------------------------------------------------~f~~--~~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 88 -----------------------------------------------------------LFQG--REDKLVVLDKLLAEL 106 (189)
T ss_dssp -----------------------------------------------------------EECS--CSCHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------HhcC--cCChHHHHHHHHHHc
Confidence 1111 14666666666 443
Q ss_pred C---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc------cccchhhhhhhchhhhhhcccccccC
Q 002392 859 G---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWCYRRISMMVKLP 928 (928)
Q Consensus 859 g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~------f~~l~~lll~~Gr~~~~~i~~~i~y~ 928 (928)
| ..+++|||+.||++|++.||+|+++++... .++..||+++.+ ++.+.++ +...|..++++++.+.|+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~ 183 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAAS-FVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEG 183 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTT
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcc
Confidence 3 579999999999999999999999965433 378899999997 4557777 566788999999998875
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.07 E-value=3.8e-10 Score=121.49 Aligned_cols=78 Identities=18% Similarity=0.198 Sum_probs=57.0
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccccc------chhhhhhhch
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF------LERLLLVHGH 915 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~------l~~lll~~Gr 915 (928)
..|+..++.+ +..| ..|+||||+.||++|++.||+||+|+++... ++..||+++.+... |.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPE-IKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHH-HHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 4799999888 6665 4699999999999999999999999776544 89999999986333 6666666777
Q ss_pred hhhhhcccc
Q 002392 916 WCYRRISMM 924 (928)
Q Consensus 916 ~~~~~i~~~ 924 (928)
+-|.+-..+
T Consensus 280 ~~~~~~~~~ 288 (290)
T 3dnp_A 280 KGFLDKFHM 288 (290)
T ss_dssp C--------
T ss_pred ccHHhHhcc
Confidence 766655444
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.01 E-value=6e-10 Score=119.52 Aligned_cols=57 Identities=21% Similarity=0.279 Sum_probs=48.8
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccc
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f 903 (928)
..|+..++.+ +..| ..|+||||+.||++|++.|++||||+++... +|.+||+|..+-
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~-~k~~A~~v~~s~ 270 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQE-VIAAAKHTCAPY 270 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHH-HHHHSSEEECCG
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHH-HHHhcCeECCCC
Confidence 3699999888 6666 4599999999999999999999999776544 899999999853
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.99 E-value=9.6e-10 Score=113.64 Aligned_cols=181 Identities=13% Similarity=0.048 Sum_probs=98.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhc-chhHHHHHHHHHH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG-DKENITKVSLESV 786 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 786 (928)
..++.+++.++|++|+++|++++++|||+...+..+++++|+.. ..+..+|...... -.+.. ....+ .....+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~-~~~~i~~~~~l--~~~~~i 93 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDN-DGSIKKFFSNE--GTNKFL 93 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECT-TSCEEESSCSH--HHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCcEEEeC-CCCEEEEeccH--HHHHHH
Confidence 34578899999999999999999999999999999999998743 1333333211100 00000 00011 001111
Q ss_pred HHHHHhhhh---hccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCC---ceEEEeeCc--ccHHHHHHHH-hc
Q 002392 787 TKQIREGIS---QVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCA---SVICCRSSP--KQKALVTRLV-KG 857 (928)
Q Consensus 787 ~~~~~~~~~---~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~---~~i~~r~~p--~qK~~iv~~l-~~ 857 (928)
..+..... .+.... ....... + +. ....+..+.+.... ... ...+....| ..|...++.+ +.
T Consensus 94 -~~~~~~~~~~~~~~~~~-~~~~~~~-~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~ 164 (227)
T 1l6r_A 94 -EEMSKRTSMRSILTNRW-REASTGF-D----ID-PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLKEM 164 (227)
T ss_dssp -HHHTTTSSCBCCGGGGG-CSSSEEE-B----CC-GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHHHH
T ss_pred -HHHHHHhcCCccccccc-eecccce-E----Ee-cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHHHH
Confidence 11110000 000000 0000000 0 00 00111111111110 000 001223445 5899999888 55
Q ss_pred CC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc
Q 002392 858 TG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (928)
Q Consensus 858 ~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~ 904 (928)
.| ..+++|||+.||++|++.|++||+|++... .++..||+++.+..
T Consensus 165 ~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~-~~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 165 YSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYSY 213 (227)
T ss_dssp TTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCCT
T ss_pred hCcCHHHEEEECCcHHhHHHHHHcCceEEecCchH-HHHHhCCEEecCCC
Confidence 44 469999999999999999999999976543 37889999997643
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.2e-09 Score=108.55 Aligned_cols=126 Identities=13% Similarity=0.069 Sum_probs=91.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHH
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 790 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (928)
+.+++.++|+.|+++|++++++||++...+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999999831
Q ss_pred HhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEc
Q 002392 791 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIG 866 (928)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiG 866 (928)
++.. ...|...++.+ +..| ..+++||
T Consensus 77 ------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 77 ------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp ------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 13466666555 4434 5799999
Q ss_pred CChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc------cchhhhhhhchhhhhhccccccc
Q 002392 867 DGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR------FLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 867 DG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~------~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
|+.||++|++.|++++++.+... .++..||+++.+.. .+.+. +...|..|++++..+.|
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~ 171 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADAPI-YVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGF 171 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTSCH-HHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHH
T ss_pred CCHHHHHHHHHcCCeEEeCCccH-HHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccch
Confidence 99999999999999999965433 37889999998742 22333 33345556666655443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.93 E-value=9.1e-10 Score=110.62 Aligned_cols=96 Identities=18% Similarity=0.168 Sum_probs=76.6
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhh
Q 002392 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (928)
Q Consensus 717 ~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.+|+.|+++|++++|+||++...+..+++.+|+..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 34999999999999999999999999999999841
Q ss_pred ccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcH
Q 002392 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (928)
Q Consensus 797 ~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~ 872 (928)
++... ..|...++.+ +..| ..+++|||+.||+
T Consensus 94 ------------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi 129 (195)
T 3n07_A 94 ------------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDW 129 (195)
T ss_dssp ------------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGH
T ss_pred ------------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence 11111 3566666555 4333 5699999999999
Q ss_pred HHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 873 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 873 ~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+|++.|+++++|++... .++..||+++..
T Consensus 130 ~~~~~ag~~va~~na~~-~~~~~ad~v~~~ 158 (195)
T 3n07_A 130 PVMEKVALRVCVADGHP-LLAQRANYVTHI 158 (195)
T ss_dssp HHHTTSSEEEECTTSCH-HHHHHCSEECSS
T ss_pred HHHHHCCCEEEECChHH-HHHHhCCEEEcC
Confidence 99999999999976543 388999999985
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.92 E-value=2e-09 Score=105.03 Aligned_cols=106 Identities=17% Similarity=0.117 Sum_probs=82.0
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHH--HcCCcccCceEEEEcCCCchhhHhhhhcch
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY--ACSLLRQEMKQIVITLDSPDMEALEKQGDK 775 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~--~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~ 775 (928)
+...++.+.++|.+ +|+.|+++|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 44567777777773 899999999999999999 67777887 44541
Q ss_pred hHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH
Q 002392 776 ENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV 855 (928)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l 855 (928)
++ ..+..|...++.+
T Consensus 77 ---------------------------------------------------------------~~--~g~~~K~~~l~~~ 91 (168)
T 3ewi_A 77 ---------------------------------------------------------------TE--VSVSDKLATVDEW 91 (168)
T ss_dssp ---------------------------------------------------------------EE--CSCSCHHHHHHHH
T ss_pred ---------------------------------------------------------------EE--ECCCChHHHHHHH
Confidence 01 1134677777766
Q ss_pred -hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 856 -KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 856 -~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+..| ..+++|||+.||++|++.|+++++|.+... .+++.||+++..
T Consensus 92 ~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~-~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 92 RKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACS-GAQKAVGYICKC 141 (168)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCH-HHHTTCSEECSS
T ss_pred HHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhH-HHHHhCCEEeCC
Confidence 5544 569999999999999999999999966543 389999999985
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.1e-09 Score=116.46 Aligned_cols=59 Identities=20% Similarity=0.279 Sum_probs=49.6
Q ss_pred cccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc
Q 002392 845 PKQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (928)
Q Consensus 845 p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~ 904 (928)
+..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++... +|.+||+++.+..
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKN-VKAAANYQAKSND 288 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHH-HHHHCSEECCCGG
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHH-HHHhccEEcCCCC
Confidence 35799999888 6666 4599999999999999999999999776544 8999999998633
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.89 E-value=5.3e-09 Score=110.36 Aligned_cols=56 Identities=29% Similarity=0.427 Sum_probs=46.9
Q ss_pred cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccc
Q 002392 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (928)
Q Consensus 847 qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f 903 (928)
.|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++. ..+|..||+|+.+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~-~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAH-EEVKRVADFVTKPV 242 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCC-HHHHHTCSEEECCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCc-HHHHHhCCEEeCCC
Confidence 799988888 5544 46999999999999999999999997644 34899999998753
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.3e-09 Score=111.62 Aligned_cols=56 Identities=27% Similarity=0.249 Sum_probs=46.5
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcE--eecc
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY--AIAQ 902 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~--vi~~ 902 (928)
..|+..++.+ +..| ..|+||||+.||++|++.|++||||+|+... +|++||+ ++.+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~-vk~~A~~~~v~~s 269 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR-LKDLHPELEVIGS 269 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCTTSEECCC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH-HHHhCCCCEeccc
Confidence 4799999888 6666 4699999999999999999999999776544 8999985 5443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.85 E-value=6.7e-09 Score=102.64 Aligned_cols=104 Identities=13% Similarity=0.184 Sum_probs=82.1
Q ss_pred HHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhc
Q 002392 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (928)
Q Consensus 718 aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
+|+.|+++|+++.|+||+....+..+++.+|+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999982
Q ss_pred cccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcHH
Q 002392 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVG 873 (928)
Q Consensus 798 ~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ 873 (928)
++.. ...|...++.+ +..| ..+++|||+.||++
T Consensus 80 -----------------------------------------~~~~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~ 116 (176)
T 3mmz_A 80 -----------------------------------------VLHG--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLP 116 (176)
T ss_dssp -----------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred -----------------------------------------eEeC--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHH
Confidence 0111 14566666655 4433 56999999999999
Q ss_pred HHHhCCeeEEecCCcchhhhhcCcEeecc------cccchhhhhh
Q 002392 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLV 912 (928)
Q Consensus 874 ml~~A~vGIam~g~e~~~ak~aAD~vi~~------f~~l~~lll~ 912 (928)
|++.|++|+++.+... .++..||+++.+ .+.+.++|+.
T Consensus 117 ~~~~ag~~v~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~l~~ 160 (176)
T 3mmz_A 117 CFALVGWPVAVASAHD-VVRGAARAVTTVPGGDGAIREIASWILG 160 (176)
T ss_dssp HHHHSSEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred HHHHCCCeEECCChhH-HHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 9999999999965433 378899999997 5567776443
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=7.2e-09 Score=110.26 Aligned_cols=63 Identities=19% Similarity=0.252 Sum_probs=50.5
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccccc--chhh
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF--LERL 909 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~--l~~l 909 (928)
..|...++.+ +..| ..+++|||+.||++|++.||+||+|+++... ++.+||+++.+... +.+.
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~edGv~~~ 267 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQ-LKDIATSICEDIFDNGIYKE 267 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHH-HHHHCSEEECCGGGTHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHH-HHHhhhheeCCCchhHHHHH
Confidence 4698888887 5544 4699999999999999999999999776543 89999999986433 4444
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.85 E-value=5.6e-09 Score=106.20 Aligned_cols=107 Identities=16% Similarity=0.162 Sum_probs=83.4
Q ss_pred EEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHH
Q 002392 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780 (928)
Q Consensus 701 llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 780 (928)
.+....+.|.+ +|+.|+++|+++.|+||++...+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 44555555554 9999999999999999999999999999999831
Q ss_pred HHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcC-
Q 002392 781 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT- 858 (928)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~- 858 (928)
++... ..|..+++.+ +..
T Consensus 118 ----------------------------------------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 118 ----------------------------------------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp ----------------------------------------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------hhccc--CChHHHHHHHHHHcC
Confidence 11111 4566666666 443
Q ss_pred --CCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccc
Q 002392 859 --GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (928)
Q Consensus 859 --g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f 903 (928)
...|++|||+.||++|++.|++++++.+... .++..||+++...
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~-~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHP-LLLPKAHYVTRIK 183 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECTTSCT-TTGGGSSEECSSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeCCccH-HHHhhCCEEEeCC
Confidence 3579999999999999999999999966433 3788999999864
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.84 E-value=6.6e-09 Score=114.24 Aligned_cols=144 Identities=22% Similarity=0.209 Sum_probs=93.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.++++.|+++|+++.|+||+....+..+++.+|+..--...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984311111111000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEE-eeCcccHHHHHHHH-hcCC---CEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-RSSPKQKALVTRLV-KGTG---KTTLA 864 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~-r~~p~qK~~iv~~l-~~~g---~~vla 864 (928)
.++|. +.. -..+..|..++..+ +..| ..|+|
T Consensus 231 --------------------~~tg~------------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~ 266 (335)
T 3n28_A 231 --------------------KLTGQ------------------------VLGEVVSAQTKADILLTLAQQYDVEIHNTVA 266 (335)
T ss_dssp --------------------EEEEE------------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------ecccccChhhhHHHHHHHHHHcCCChhhEEE
Confidence 00000 000 01123455555555 4333 57999
Q ss_pred EcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhhhhhhchhhhhhccccccc
Q 002392 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMVKL 927 (928)
Q Consensus 865 iGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~~~i~~~i~y 927 (928)
||||.||++|++.||+||+|.+.+. +++.||+++.. +..+..+ +........|++.++.+
T Consensus 267 vGDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~ 328 (335)
T 3n28_A 267 VGDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKE 328 (335)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC---
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhcccccc
Confidence 9999999999999999999944433 78899999853 3334444 33333445566666654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.1e-08 Score=106.63 Aligned_cols=55 Identities=15% Similarity=0.203 Sum_probs=46.8
Q ss_pred EeeCcc--cHHHHHHHH-hcCCCEEEEEcCChhcHHHHHhC--CeeEEecCCcchhhhhcCcEeecc
Q 002392 841 CRSSPK--QKALVTRLV-KGTGKTTLAIGDGANDVGMLQEA--DIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g~~vlaiGDG~ND~~ml~~A--~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..+.|. .|+..++.+ +..| |++|||+.||++||+.| ++||+|+|+ +..||+++.+
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EEEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 344454 899999999 6677 99999999999999999 999999775 5679998876
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.82 E-value=8.8e-09 Score=110.28 Aligned_cols=61 Identities=21% Similarity=0.319 Sum_probs=49.0
Q ss_pred eeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccc
Q 002392 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (928)
Q Consensus 842 r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f 903 (928)
...|. .|...++.+ +..| ..+++|||+.||++|++.|++||+|+++.. .++..||+++.+.
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~~ 257 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKSN 257 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCCT
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecCC
Confidence 44444 899999888 5444 469999999999999999999999976543 3788999998763
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.76 E-value=4.2e-09 Score=105.58 Aligned_cols=118 Identities=16% Similarity=0.139 Sum_probs=84.2
Q ss_pred HHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhcc
Q 002392 719 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVN 798 (928)
Q Consensus 719 I~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (928)
|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999999842
Q ss_pred ccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEee--CcccHHHHHHHHhcCCCEEEEEcCChhcHHHHH
Q 002392 799 SAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS--SPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQ 876 (928)
Q Consensus 799 ~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~--~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~ 876 (928)
++... .|+-...+.+.+.-....+++|||+.||++|++
T Consensus 88 ----------------------------------------~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~ 127 (191)
T 3n1u_A 88 ----------------------------------------YYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQ 127 (191)
T ss_dssp ----------------------------------------EECSCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred ----------------------------------------ceeCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHH
Confidence 11111 111222223333223356999999999999999
Q ss_pred hCCeeEEecCCcchhhhhcCcEeecc------cccchhhhhhhchhhhhhccccc
Q 002392 877 EADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWCYRRISMMV 925 (928)
Q Consensus 877 ~A~vGIam~g~e~~~ak~aAD~vi~~------f~~l~~lll~~Gr~~~~~i~~~i 925 (928)
.||+++++.+... .++..||+++.+ .+.+.++ +...|..|..+....
T Consensus 128 ~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~~~~ 180 (191)
T 3n1u_A 128 QVGLGVAVSNAVP-QVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAITGY 180 (191)
T ss_dssp HSSEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHHH
T ss_pred HCCCEEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHHHHH
Confidence 9999999966543 378899999987 4446666 445565665554443
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.76 E-value=2e-08 Score=106.46 Aligned_cols=63 Identities=27% Similarity=0.337 Sum_probs=51.2
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccccc--chhh
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF--LERL 909 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~--l~~l 909 (928)
..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++... +|++||+++.+... +.+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~edGv~~~ 261 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEK-VQSVADFVTDTVDNSGLYKA 261 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHTCSEECCCTTTTHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHH-HHHhcCEeeCCCCcCHHHHH
Confidence 4799999888 6665 4599999999999999999999999776544 89999999986333 4444
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.75 E-value=2.2e-08 Score=104.97 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=46.6
Q ss_pred ccHHHHHHHH-hc----CCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 846 KQKALVTRLV-KG----TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 846 ~qK~~iv~~l-~~----~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..|+..++.+ +. ....|+||||+.||++||+.|++||+|+++.....+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4699999888 44 235799999999999999999999999876533367789988764
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.8e-08 Score=108.78 Aligned_cols=56 Identities=18% Similarity=0.281 Sum_probs=47.3
Q ss_pred cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeec-cc
Q 002392 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA-QF 903 (928)
Q Consensus 847 qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~-~f 903 (928)
.|...++.+ +..| ..|++|||+.||++|++.|++||+|+++.. .++..||+++. +.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~~ 284 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPVSH 284 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSSCT
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEccCC
Confidence 799999888 5555 469999999999999999999999976643 37889999997 53
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=2.1e-08 Score=97.82 Aligned_cols=109 Identities=20% Similarity=0.105 Sum_probs=82.6
Q ss_pred HHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhc
Q 002392 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (928)
Q Consensus 718 aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
+|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999842
Q ss_pred cccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcHH
Q 002392 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVG 873 (928)
Q Consensus 798 ~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ 873 (928)
++.. ...|...++.+ +..+ ..+++|||+.||++
T Consensus 73 -----------------------------------------~~~~--~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 73 -----------------------------------------LFQG--VVDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp -----------------------------------------EECS--CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred -----------------------------------------eecc--cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 1111 13455555544 3333 57999999999999
Q ss_pred HHHhCCeeEEecCCcchhhhhcCcEeecc------cccchhhhhhhchhh
Q 002392 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWC 917 (928)
Q Consensus 874 ml~~A~vGIam~g~e~~~ak~aAD~vi~~------f~~l~~lll~~Gr~~ 917 (928)
|++.||+++++.+... .++..||+++.+ ++.+.+.++ +|+|.
T Consensus 110 ~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 110 LLKRVGIAGVPASAPF-YIRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp HHTTSSEEECCTTSCH-HHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred HHHHCCCeEEcCChHH-HHHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 9999999999955433 378899999997 445555545 66643
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=5.2e-08 Score=98.66 Aligned_cols=127 Identities=21% Similarity=0.285 Sum_probs=85.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.++++++++.|++.|+++.++||+....+..+.+.+|+...-.........
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC---------------------------
Confidence 56789999999999999999999999988888888877763110000000000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEe-eCcccHHHHHHHH-hcCC---CEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 864 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~l-~~~g---~~vla 864 (928)
.+++. +... +.+..|...+..+ +..| ..+++
T Consensus 129 --------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~ 164 (211)
T 1l7m_A 129 --------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVA 164 (211)
T ss_dssp --------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEE
Confidence 00000 0001 1134576666655 5444 45999
Q ss_pred EcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhh
Q 002392 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERL 909 (928)
Q Consensus 865 iGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~l 909 (928)
|||+.||++|++.||++++|...+ ..+..||+++.+ +..|..+
T Consensus 165 iGD~~~Di~~~~~ag~~~~~~~~~--~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 165 VGDGANDISMFKKAGLKIAFCAKP--ILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp EECSGGGHHHHHHCSEEEEESCCH--HHHTTCSEEECSSCGGGGGGG
T ss_pred EecChhHHHHHHHCCCEEEECCCH--HHHhhcceeecchhHHHHHHh
Confidence 999999999999999999997433 267789999987 6665544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.64 E-value=4.4e-08 Score=104.15 Aligned_cols=58 Identities=24% Similarity=0.247 Sum_probs=48.0
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~ 904 (928)
..|...++.+ +..| ..+++|||+.||++|++.|++||+|+++.. .++..||+++.+..
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDNN 251 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccH-HHHHhCCeeCcCCC
Confidence 4899999888 5544 469999999999999999999999976643 37889999997643
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.62 E-value=3.7e-08 Score=98.93 Aligned_cols=117 Identities=18% Similarity=0.242 Sum_probs=88.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.+.++.|++.|++++++|+.....+..+ +.+|+..- ...+..
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~------------------------------ 126 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIF------------------------------ 126 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEE------------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEe------------------------------
Confidence 7899999999999999999999999988877777 77776321 111100
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
.... .......|..|...++.+ ....+++|||+.
T Consensus 127 ----------------------~~~~----------------------~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~ 160 (201)
T 4ap9_A 127 ----------------------EDGK----------------------FQGIRLRFRDKGEFLKRF--RDGFILAMGDGY 160 (201)
T ss_dssp ----------------------ETTE----------------------EEEEECCSSCHHHHHGGG--TTSCEEEEECTT
T ss_pred ----------------------eCCc----------------------eECCcCCccCHHHHHHhc--CcCcEEEEeCCH
Confidence 0000 011345567898888888 456799999999
Q ss_pred hcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhh
Q 002392 870 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 870 ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
||+.|++.||+||+|.+... .||+++.++..|..+
T Consensus 161 ~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 161 ADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp CCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 99999999999999966543 899999988877666
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=9.3e-08 Score=95.49 Aligned_cols=109 Identities=16% Similarity=0.203 Sum_probs=79.9
Q ss_pred HHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhc
Q 002392 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (928)
Q Consensus 718 aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (928)
+|+.|+++|++++++||++...+..+++.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999888731
Q ss_pred cccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcHH
Q 002392 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVG 873 (928)
Q Consensus 798 ~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ 873 (928)
++.. ...|...++.+ +..| ..+++|||+.||+.
T Consensus 95 -----------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~ 131 (188)
T 2r8e_A 95 -----------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP 131 (188)
T ss_dssp -----------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 1111 12344444444 4433 56999999999999
Q ss_pred HHHhCCeeEEecCCcchhhhhcCcEeeccc-------ccchhhhhhhchh
Q 002392 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQF-------RFLERLLLVHGHW 916 (928)
Q Consensus 874 ml~~A~vGIam~g~e~~~ak~aAD~vi~~f-------~~l~~lll~~Gr~ 916 (928)
|++.||+++++.+... .++..||+++.+. ..+..++-.+|+|
T Consensus 132 ~a~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~~ 180 (188)
T 2r8e_A 132 VMEKVGLSVAVADAHP-LLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL 180 (188)
T ss_dssp HHTTSSEEEECTTSCT-TTGGGSSEECSSCTTTTHHHHHHHHHHHHTTCC
T ss_pred HHHHCCCEEEecCcCH-HHHhcCCEEEeCCCCCcHHHHHHHHHHHhcCcH
Confidence 9999999999864432 3677899999985 2244444445554
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.4e-07 Score=100.03 Aligned_cols=61 Identities=23% Similarity=0.320 Sum_probs=48.6
Q ss_pred eeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccc
Q 002392 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (928)
Q Consensus 842 r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f 903 (928)
...|. .|...++.+ +..| ..+++|||+.||++|++.|++||+|+++.. ..+..||+++.+.
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLTN 249 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCCT
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCH-HHHhhCCEEEccC
Confidence 34444 799988888 5444 469999999999999999999999976543 3788899998753
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=3e-07 Score=87.59 Aligned_cols=107 Identities=19% Similarity=0.368 Sum_probs=77.2
Q ss_pred cCCccHHHHHHHHHHc-CcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCc
Q 002392 543 AESPDEAAFVIAAREV-GFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGAD 621 (928)
Q Consensus 543 ~~sp~e~al~~~a~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 621 (928)
++||...|++++|++. |+.+..- ... .....+|++..++.+|.+ +| .-+.+|++
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~~------------------~~~--~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~ 103 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERDV------------------QSL--HATFVPFTAQSRMSGINI---DN--RMIRKGSV 103 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCCH------------------HHH--TCEEEEEETTTTEEEEEE---TT--EEEEEEEH
T ss_pred CCCHHHHHHHHHHHHhcCCCcccc------------------ccc--ccceeeccccCCCCeEEE---CC--EEEEEeCc
Confidence 4799999999999986 6543110 000 012357888887777754 45 34668999
Q ss_pred hhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceE
Q 002392 622 SVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701 (928)
Q Consensus 622 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~l 701 (928)
+.|..++...+-.....+.+.++.++.+|.+++++| .|..+
T Consensus 104 ~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~l 144 (156)
T 1svj_A 104 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRV 144 (156)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCEE
Confidence 888777765433334457778889999999999999 46789
Q ss_pred EEEeeecccCCC
Q 002392 702 LGATAVEDKLQK 713 (928)
Q Consensus 702 lG~~~ieD~lr~ 713 (928)
+|++++.|++|+
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-07 Score=95.90 Aligned_cols=129 Identities=19% Similarity=0.261 Sum_probs=88.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..++.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 458999999999999999999999999999999999998884321111111000
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEe-eCcccHHHHHHHH-hcCC---CEEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTL 863 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~~p~qK~~iv~~l-~~~g---~~vl 863 (928)
.++| .+... .....|..+++.+ +..| ..++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 00111 1234566666665 4433 5699
Q ss_pred EEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhhh
Q 002392 864 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLL 910 (928)
Q Consensus 864 aiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~ll 910 (928)
+|||+.||+.|++.||++++|...+. .+..||+++.+ +..+..++
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGTTC-
T ss_pred EEeCCHHHHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHHHHh
Confidence 99999999999999999999933333 78899999984 55566663
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=3.7e-07 Score=96.18 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=45.2
Q ss_pred ccHHHHHHHH-hcCC-----CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 846 KQKALVTRLV-KGTG-----KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g-----~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..|...++.+ +..| ..+++|||+.||++|++.|++||+|+|+.. + +|+++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 6899999888 6655 579999999999999999999999987765 3 67888764
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.51 E-value=3.7e-07 Score=92.70 Aligned_cols=131 Identities=17% Similarity=0.220 Sum_probs=86.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHH
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 790 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (928)
+.+++.+.++.|++.|++++++|+.....+..+.+.+|+........
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 129 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAV--------------------------------- 129 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEE---------------------------------
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEe---------------------------------
Confidence 78999999999999999999999999999999999999842110000
Q ss_pred HhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCCCEEEEEcCCh
Q 002392 791 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGA 869 (928)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g~~vlaiGDG~ 869 (928)
.+++...... ..+......|..+...+... .-....++||||+.
T Consensus 130 -----------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~ 174 (219)
T 3kd3_A 130 -----------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGY 174 (219)
T ss_dssp -----------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSH
T ss_pred -----------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCH
Confidence 0011000000 00011123445666655544 44557899999999
Q ss_pred hcHHHHHh----CCeeEEecCCcchhhhhcCcEeecccccchhhh
Q 002392 870 NDVGMLQE----ADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 870 ND~~ml~~----A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
||++|+++ +.+|+++.+ .....+..||+++.++..|..+|
T Consensus 175 ~Di~~~~~G~~~~~v~~~~~~-~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 175 TDYQLYEKGYATKFIAYMEHI-EREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHHHHHTSCSEEEEECSSC-CCHHHHHHCSEEESSHHHHHHHH
T ss_pred hHHHHHhCCCCcEEEeccCcc-ccHHHHhhcceeeCCHHHHHHhh
Confidence 99999975 233444433 33336788999999988887764
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.50 E-value=5.5e-07 Score=96.51 Aligned_cols=57 Identities=25% Similarity=0.282 Sum_probs=47.1
Q ss_pred cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc
Q 002392 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (928)
Q Consensus 847 qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~ 904 (928)
.|+..++.+ +..| ..+++|||+.||++|++.|++||+|+++.. ..+..||+++.+..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 799988888 5555 469999999999999999999999976543 37888999987643
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.47 E-value=2.7e-07 Score=101.14 Aligned_cols=75 Identities=16% Similarity=0.221 Sum_probs=57.2
Q ss_pred cccHHHHHHHHhcC--CCEEEEEcCChhcHHHHHhC----CeeEEecCCcchhhhhcCcEeecccc------cchhhhhh
Q 002392 845 PKQKALVTRLVKGT--GKTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQFR------FLERLLLV 912 (928)
Q Consensus 845 p~qK~~iv~~l~~~--g~~vlaiGDG~ND~~ml~~A----~vGIam~g~e~~~ak~aAD~vi~~f~------~l~~lll~ 912 (928)
+.+|+..++.+... .+.|+|||||.||++|++.| |+||+| ++.. .++..||+++.+-. .|.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~-~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNE-YALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCH-HHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCH-HHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 45798888877322 24599999999999999999 999999 6543 38899999998622 25555 77
Q ss_pred hchhhhhhccc
Q 002392 913 HGHWCYRRISM 923 (928)
Q Consensus 913 ~Gr~~~~~i~~ 923 (928)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 899877 4443
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=2.8e-07 Score=96.22 Aligned_cols=185 Identities=14% Similarity=0.177 Sum_probs=93.9
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhh-HhhhhcchhHHHHHH-HHHHHHHH
Q 002392 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDME-ALEKQGDKENITKVS-LESVTKQI 790 (928)
Q Consensus 713 ~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~ 790 (928)
+.+.++|++++ +|++++++|||+...+..+.+++++..+ ...+..||...... .+... ....+.... ...+. ..
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~-~~~I~~NGa~i~~~~~~~~~-~~~~~~~~~~~~~~~-~~ 97 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEP-DYWLTAVGSEIYHPEGLDQH-WADYLSEHWQRDILQ-AI 97 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCC-SEEEETTTTEEEETTEECHH-HHHHHHTTCCHHHHH-HH
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCC-CEEEECCCcEEEeCCCcChH-HHHHHhccccHHHHH-HH
Confidence 45667777755 6899999999999999999999876422 22333344321100 00000 000000000 01111 11
Q ss_pred Hhhhhhccc---cccccceEEEEEccchhhHHhHHHHHHHHHHhhccCC----ceEEEeeCcc--cHHHHHHHH-hcCC-
Q 002392 791 REGISQVNS---AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCA----SVICCRSSPK--QKALVTRLV-KGTG- 859 (928)
Q Consensus 791 ~~~~~~~~~---~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~----~~i~~r~~p~--qK~~iv~~l-~~~g- 859 (928)
......... ......+..+.......... .+.+.+.+........ ...+....|. .|...++.+ +..|
T Consensus 98 ~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~ 176 (244)
T 1s2o_A 98 ADGFEALKPQSPLEQNPWKISYHLDPQACPTV-IDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAM 176 (244)
T ss_dssp HHTCTTEEECCGGGCBTTBEEEEECTTSCTHH-HHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTC
T ss_pred HHhccCccccCcccCCCeEEEEEeChhhHHHH-HHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCC
Confidence 000000000 01112233333332222111 1122233321100000 0012334443 799999888 5555
Q ss_pred --CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhc-------CcEeeccc
Q 002392 860 --KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-------SDYAIAQF 903 (928)
Q Consensus 860 --~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~a-------AD~vi~~f 903 (928)
..+++|||+.||++|++.|++||+|+++.. .++.. ||+++.+.
T Consensus 177 ~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~-~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 177 EPSQTLVCGDSGNDIGLFETSARGVIVRNAQP-ELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp CGGGEEEEECSGGGHHHHTSSSEEEECTTCCH-HHHHHHHHHCCTTEEECSSC
T ss_pred CHHHEEEECCchhhHHHHhccCcEEEEcCCcH-HHHHHHhcccccceeecCCc
Confidence 469999999999999999999999976543 36664 88988753
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=3e-07 Score=92.92 Aligned_cols=127 Identities=19% Similarity=0.106 Sum_probs=88.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccC--ceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE--MKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...- ..+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i------------------------------- 118 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADV------------------------------- 118 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGE-------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceE-------------------------------
Confidence 56799999999999999999999999998888888888874211 000
Q ss_pred HHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEE
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTL 863 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vl 863 (928)
+.++ . .. ..-|..+++.+ +..| ..++
T Consensus 119 -----------------------~~~~------------------------~-~~--~kp~~~~~~~~~~~~g~~~~~~i 148 (205)
T 3m9l_A 119 -----------------------LGRD------------------------E-AP--PKPHPGGLLKLAEAWDVSPSRMV 148 (205)
T ss_dssp -----------------------ECTT------------------------T-SC--CTTSSHHHHHHHHHTTCCGGGEE
T ss_pred -----------------------EeCC------------------------C-CC--CCCCHHHHHHHHHHcCCCHHHEE
Confidence 0000 0 00 01122233333 4433 5699
Q ss_pred EEcCChhcHHHHHhCCe-eEEecCCcchhhhhcCcEeecccccchhhhhhhchhhh
Q 002392 864 AIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCY 918 (928)
Q Consensus 864 aiGDG~ND~~ml~~A~v-GIam~g~e~~~ak~aAD~vi~~f~~l~~lll~~Gr~~~ 918 (928)
+|||+.||+.|.+.||+ +|+|.+.... .+..||+++.++..|..++=.+++..|
T Consensus 149 ~iGD~~~Di~~a~~aG~~~i~v~~~~~~-~~~~ad~v~~~~~el~~~~~~~~~~~~ 203 (205)
T 3m9l_A 149 MVGDYRFDLDCGRAAGTRTVLVNLPDNP-WPELTDWHARDCAQLRDLLSAEGHHHH 203 (205)
T ss_dssp EEESSHHHHHHHHHHTCEEEECSSSSCS-CGGGCSEECSSHHHHHHHHHHTTCC--
T ss_pred EECCCHHHHHHHHHcCCEEEEEeCCCCc-ccccCCEEeCCHHHHHHHHHhcccccc
Confidence 99999999999999999 9999654432 677899999999998888555555443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.44 E-value=5.7e-07 Score=101.77 Aligned_cols=131 Identities=23% Similarity=0.279 Sum_probs=92.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+..--...+.+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~------------------------------ 305 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEI------------------------------ 305 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEE------------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEE------------------------------
Confidence 79999999999999999999999999999999999999984211100000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEe-----eCcccHHHHHHHH-hcCC---C
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-----SSPKQKALVTRLV-KGTG---K 860 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-----~~p~qK~~iv~~l-~~~g---~ 860 (928)
.+| .+..+ ..+.-|..+++.+ +..| .
T Consensus 306 ---------------------~dg------------------------~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~ 340 (415)
T 3p96_A 306 ---------------------VDG------------------------TLTGRVVGPIIDRAGKATALREFAQRAGVPMA 340 (415)
T ss_dssp ---------------------ETT------------------------EEEEEECSSCCCHHHHHHHHHHHHHHHTCCGG
T ss_pred ---------------------eCC------------------------EEEeeEccCCCCCcchHHHHHHHHHHcCcChh
Confidence 000 01111 1134566666666 4444 4
Q ss_pred EEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhhhhhhchhhh
Q 002392 861 TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCY 918 (928)
Q Consensus 861 ~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~lll~~Gr~~~ 918 (928)
.+++|||+.||++|++.||+|+++.+.+. ++..||+++.. +..+..+ +-.+|.-+
T Consensus 341 ~~i~vGD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l~~ll~~-l~~~~~~~ 397 (415)
T 3p96_A 341 QTVAVGDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYLDTVLFL-LGVTRGEI 397 (415)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCTTHHHHH-TTCCHHHH
T ss_pred hEEEEECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCHHHHHHH-hCCCHHHH
Confidence 69999999999999999999999944333 78899999874 4445555 44555443
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.44 E-value=9.4e-07 Score=91.32 Aligned_cols=182 Identities=12% Similarity=0.147 Sum_probs=96.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+.. ..+..+|..... -.+......+ .....+..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~--~~~~~~~~~l--~~~~~i~~ 91 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISY--KKKRIFLASM--DEEWILWN 91 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEE--TTEEEESCCC--SHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEe--CCEEEEeccH--HHHHHHHH
Confidence 3477889999999999999999999999999999999888632 123323211000 0000000000 00011111
Q ss_pred HHH-hh-hhhccc-cccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE----EEeeCc--ccHHHHHHHH-hcC
Q 002392 789 QIR-EG-ISQVNS-AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI----CCRSSP--KQKALVTRLV-KGT 858 (928)
Q Consensus 789 ~~~-~~-~~~~~~-~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i----~~r~~p--~qK~~iv~~l-~~~ 858 (928)
.+. .. ...... ........ .+.+ .... .+........+..... ++ +....| ..|...++.+ +..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~ei~~~~~~K~~~~~~~~~~~ 165 (231)
T 1wr8_A 92 EIRKRFPNARTSYTMPDRRAGL-VIMR-ETIN---VETVREIINELNLNLV-AVDSGFAIHVKKPWINKGSGIEKASEFL 165 (231)
T ss_dssp HHHHHCTTCCBCTTGGGCSSCE-EECT-TTSC---HHHHHHHHHHTTCSCE-EEECSSCEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHhCCCceEEecCCCceeeE-EEEC-CCCC---HHHHHHHHHhcCCcEE-EEecCcEEEEecCCCChHHHHHHHHHHc
Confidence 111 00 000000 00000011 1222 1000 0111111111111111 11 123333 4788888887 544
Q ss_pred C---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc
Q 002392 859 G---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (928)
Q Consensus 859 g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~ 904 (928)
| ..+++|||+.||++|++.|++||+|+++.. ..+..||+++.+..
T Consensus 166 ~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 166 GIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKKEY 213 (231)
T ss_dssp TSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSSCH
T ss_pred CCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCH-HHHhhCCEEecCCC
Confidence 4 469999999999999999999999976543 36788999998643
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.43 E-value=2.2e-08 Score=105.81 Aligned_cols=63 Identities=27% Similarity=0.465 Sum_probs=50.9
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccccc--chhh
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF--LERL 909 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~--l~~l 909 (928)
..|...++.+ +..| ..+++|||+.||++|++.|++||+|+++.. ..+..||+++.+... +.++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGGGTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCchhhHHHH
Confidence 3788888777 5544 469999999999999999999999976543 378899999987666 6655
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.42 E-value=1.5e-06 Score=92.35 Aligned_cols=42 Identities=10% Similarity=0.094 Sum_probs=37.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
+.+-+.+.++|++|+++|++++++|||+...+..+...+++.
T Consensus 25 ~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 25 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 345578999999999999999999999999999999998863
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.40 E-value=7.7e-07 Score=96.42 Aligned_cols=127 Identities=20% Similarity=0.194 Sum_probs=85.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.++++.|+++|+++.++||.....+..+++.+|+..--...+...+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984211111111000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEE-eeCcccHHHHHHHH-hcCC---CEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-RSSPKQKALVTRLV-KGTG---KTTLA 864 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~-r~~p~qK~~iv~~l-~~~g---~~vla 864 (928)
.++|. +.. -..+.-|..++..+ +..| ..+++
T Consensus 232 --------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~ 267 (317)
T 4eze_A 232 --------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIA 267 (317)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 00000 000 01123455555554 4333 56999
Q ss_pred EcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeec--ccccchhh
Q 002392 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--QFRFLERL 909 (928)
Q Consensus 865 iGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~--~f~~l~~l 909 (928)
|||+.||+.|.+.||+|+++.+.+. .+..||+++. ++..+..+
T Consensus 268 VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~~~~L~~ll~~ 312 (317)
T 4eze_A 268 CGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQINYHGFELLLFL 312 (317)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEESSSCGGGGGGG
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeCCCCHHHHHHH
Confidence 9999999999999999999944333 6788998875 34445444
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.39 E-value=3.4e-07 Score=94.64 Aligned_cols=129 Identities=22% Similarity=0.236 Sum_probs=86.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
..+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 35789999999999999999999999999888888888887422111
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG 868 (928)
++.++.. -.....|+--..+.+.+.-....+++|||+
T Consensus 150 ---------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~ 186 (237)
T 4ex6_A 150 ---------------------IAGDDSV----------------------ERGKPHPDMALHVARGLGIPPERCVVIGDG 186 (237)
T ss_dssp ---------------------EECTTTS----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------EEeCCCC----------------------CCCCCCHHHHHHHHHHcCCCHHHeEEEcCC
Confidence 1111000 000001111122233332233569999999
Q ss_pred hhcHHHHHhCCe---eEEecCCcchhhhh-cCcEeecccccchhhhhhhc
Q 002392 869 ANDVGMLQEADI---GVGISGVEGMQAVM-SSDYAIAQFRFLERLLLVHG 914 (928)
Q Consensus 869 ~ND~~ml~~A~v---GIam~g~e~~~ak~-aAD~vi~~f~~l~~lll~~G 914 (928)
.||+.|.+.||+ +|++++......+. .||+++.++..|..+ +..|
T Consensus 187 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~-l~~~ 235 (237)
T 4ex6_A 187 VPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA-VLDG 235 (237)
T ss_dssp HHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH-HHHC
T ss_pred HHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH-HHcc
Confidence 999999999999 77776443332444 799999999888887 4443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.37 E-value=1.8e-06 Score=87.98 Aligned_cols=117 Identities=14% Similarity=0.073 Sum_probs=80.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+++.+.++.+++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--------------------------------- 140 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE---------------------------------
Confidence 45789999999999999999999999888777777777764211111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccH--HHHHHHH-hcC---CCEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK--ALVTRLV-KGT---GKTTL 863 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK--~~iv~~l-~~~---g~~vl 863 (928)
+++...+..| ...++.+ +.. ...++
T Consensus 141 -------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i 171 (226)
T 1te2_A 141 -------------------------------------------------ASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 171 (226)
T ss_dssp -------------------------------------------------EECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred -------------------------------------------------EeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 1111011111 2233332 332 35699
Q ss_pred EEcCChhcHHHHHhCCeeEEe----cCCcchhhhhcCcEeecccccchhh
Q 002392 864 AIGDGANDVGMLQEADIGVGI----SGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 864 aiGDG~ND~~ml~~A~vGIam----~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
+|||+.||++|++.||+++++ .+... ..+..||+++.++..|..-
T Consensus 172 ~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~-~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 172 ALEDSVNGMIASKAARMRSIVVPAPEAQND-PRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp EEESSHHHHHHHHHTTCEEEECCCTTTTTC-GGGGGSSEECSCGGGCCHH
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcCCCCccc-ccccccCeEECCHHHHhHH
Confidence 999999999999999999988 33322 2578899999988876655
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=7.7e-07 Score=91.09 Aligned_cols=123 Identities=17% Similarity=0.122 Sum_probs=88.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 132 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAI-------------------------------- 132 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeee--------------------------------
Confidence 357899999999999999999999999988888888888874221111
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeC--cccHHHHHHHH-hcCC---CEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVTRLV-KGTG---KTT 862 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~--p~qK~~iv~~l-~~~g---~~v 862 (928)
+.+... ..-|..+++.+ +..| ..+
T Consensus 133 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 133 --------------------------------------------------VGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp --------------------------------------------------EEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred --------------------------------------------------eccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 111111 12355555444 4433 479
Q ss_pred EEEcCChhcHHHHHhCCe---eEEecCCcchhh-hhcCcEeecccccchhhhhhh
Q 002392 863 LAIGDGANDVGMLQEADI---GVGISGVEGMQA-VMSSDYAIAQFRFLERLLLVH 913 (928)
Q Consensus 863 laiGDG~ND~~ml~~A~v---GIam~g~e~~~a-k~aAD~vi~~f~~l~~lll~~ 913 (928)
++|||+.||+.|.+.||+ +|++++...... +..||+++.++..|..++.-+
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL 217 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred EEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence 999999999999999999 666544333222 578999999999988885433
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.7e-06 Score=83.81 Aligned_cols=105 Identities=14% Similarity=0.099 Sum_probs=77.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHH
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 790 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (928)
+.+++.++|+.|+++|++++++||++...+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45667899999999999999999999999999999988731
Q ss_pred HhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcC---CCEEEEEc
Q 002392 791 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT---GKTTLAIG 866 (928)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~---g~~vlaiG 866 (928)
++.. +..|...++.+ +.. ...+++||
T Consensus 78 ------------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 78 ------------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp ------------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ------------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 11223333322 333 34699999
Q ss_pred CChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccccc
Q 002392 867 DGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF 905 (928)
Q Consensus 867 DG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~ 905 (928)
|+.||+.|.+.||+++++.+... ..+..||+++.+...
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~~~-~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNAVE-EVRKVAVYITQRNGG 145 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECSSCSS
T ss_pred CCHHHHHHHHHCCCeEEecCccH-HHHhhCCEEecCCCC
Confidence 99999999999999998854432 367789999997554
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.25 E-value=3.2e-06 Score=86.61 Aligned_cols=126 Identities=19% Similarity=0.283 Sum_probs=87.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCc--eEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM--KQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
++.|++.++|+.|+++|++++++|+.....+..+.+.+|+..... ..+.+...
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~------------------------- 140 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFN------------------------- 140 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTT-------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCC-------------------------
Confidence 689999999999999999999999999999999999999853110 00000000
Q ss_pred HHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEe-e-----CcccHHHHHHHH-hcCC-
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-S-----SPKQKALVTRLV-KGTG- 859 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r-~-----~p~qK~~iv~~l-~~~g- 859 (928)
..+.+. . .+..|..++..+ +..|
T Consensus 141 -------------------------------------------------~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~ 171 (225)
T 1nnl_A 141 -------------------------------------------------GEYAGFDETQPTAESGGKGKVIKLLKEKFHF 171 (225)
T ss_dssp -------------------------------------------------SCEEEECTTSGGGSTTHHHHHHHHHHHHHCC
T ss_pred -------------------------------------------------CcEecCCCCCcccCCCchHHHHHHHHHHcCC
Confidence 001111 1 122466666555 4434
Q ss_pred CEEEEEcCChhcHHHHHhCCeeEEecCCc-chhhhhcCcEeecccccchhh
Q 002392 860 KTTLAIGDGANDVGMLQEADIGVGISGVE-GMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGIam~g~e-~~~ak~aAD~vi~~f~~l~~l 909 (928)
..+++|||+.||+.|.+.||++|++++.. .......+|+++.++..|..+
T Consensus 172 ~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 172 KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp SCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred CcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 57999999999999999999988885432 222455799999998887665
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.2e-06 Score=89.95 Aligned_cols=129 Identities=16% Similarity=0.054 Sum_probs=85.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 136 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--------------------------------- 136 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe---------------------------------
Confidence 34679999999999999999999999999888888888887432111
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLA 864 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vla 864 (928)
++.+... .. ..-|..+++.+ +..| ..+++
T Consensus 137 ---------------------~~~~~~~------------------------~~--~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 137 ---------------------IVTRDDV------------------------SY--GKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp ---------------------EECGGGS------------------------SC--CTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred ---------------------eeccccC------------------------CC--CCCChHHHHHHHHHhCCCHHHEEE
Confidence 0110000 00 11123333333 4444 56999
Q ss_pred EcCChhcHHHHHhCCe---eEEecCCcchhhhhc-CcEeecccccchhhhhhhchhh
Q 002392 865 IGDGANDVGMLQEADI---GVGISGVEGMQAVMS-SDYAIAQFRFLERLLLVHGHWC 917 (928)
Q Consensus 865 iGDG~ND~~ml~~A~v---GIam~g~e~~~ak~a-AD~vi~~f~~l~~lll~~Gr~~ 917 (928)
|||+.||+.|.+.||+ +|+++.......+.. ||+++.++..|..+|-.+++..
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~~ 226 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIASRE 226 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGTCC--
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHHhhhc
Confidence 9999999999999999 444433333334454 9999999999988854444443
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=7.6e-07 Score=93.95 Aligned_cols=55 Identities=13% Similarity=0.222 Sum_probs=44.4
Q ss_pred cHHHHHHHH-hcCCCEEEEEcC----ChhcHHHHHhCC-eeEEecCCcchhhhhcCcEeecc
Q 002392 847 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 847 qK~~iv~~l-~~~g~~vlaiGD----G~ND~~ml~~A~-vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
.|+..++.+ .-....|+|||| +.||++||+.|+ +|++|+|+. ..++..||+++..
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~-~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQ-DTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHH-HHHHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCC-HHHHHhhheeCCC
Confidence 799999988 112257999999 999999999999 699996553 3488999998764
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.21 E-value=3.4e-06 Score=85.84 Aligned_cols=119 Identities=15% Similarity=0.087 Sum_probs=77.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHH
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 790 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (928)
+.+++.+.++.+++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 135 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDII---------------------------------- 135 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEE----------------------------------
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeee----------------------------------
Confidence 4689999999999999999999999988888887777764211100
Q ss_pred HhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEc
Q 002392 791 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIG 866 (928)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiG 866 (928)
+.+.. + ....| |...+..+ +..| ..+++||
T Consensus 136 --------------------~~~~~-----------------------~-~~~k~--~~~~~~~~~~~~~~~~~~~i~iG 169 (225)
T 3d6j_A 136 --------------------IGGED-----------------------V-THHKP--DPEGLLLAIDRLKACPEEVLYIG 169 (225)
T ss_dssp --------------------ECGGG-----------------------C-SSCTT--STHHHHHHHHHTTCCGGGEEEEE
T ss_pred --------------------eehhh-----------------------c-CCCCC--ChHHHHHHHHHhCCChHHeEEEc
Confidence 00000 0 00001 11222222 3333 4699999
Q ss_pred CChhcHHHHHhCCeeEEe----cCCcchhhhhc-CcEeecccccchhhh
Q 002392 867 DGANDVGMLQEADIGVGI----SGVEGMQAVMS-SDYAIAQFRFLERLL 910 (928)
Q Consensus 867 DG~ND~~ml~~A~vGIam----~g~e~~~ak~a-AD~vi~~f~~l~~ll 910 (928)
|+.||++|++.||+++++ .+.. .+.+.. ||+++.++..|..+|
T Consensus 170 D~~nDi~~~~~aG~~~~~~~~~~~~~-~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 170 DSTVDAGTAAAAGVSFTGVTSGMTTA-QEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp SSHHHHHHHHHHTCEEEEETTSSCCT-TGGGGSCCSEEESSGGGGC---
T ss_pred CCHHHHHHHHHCCCeEEEECCCCCCh-HHHhhcCCCEEECCHHHHHHhh
Confidence 999999999999999876 2222 223444 999999888877764
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.20 E-value=6.3e-06 Score=83.10 Aligned_cols=124 Identities=19% Similarity=0.186 Sum_probs=88.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+...-...+.....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~--------------------------- 120 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS--------------------------- 120 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT---------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCC---------------------------
Confidence 5789999999999999 999999999999999999999984211000110000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE-E-EeeCcccHHHHHHHHhcCCCEEEEEcC
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-C-CRSSPKQKALVTRLVKGTGKTTLAIGD 867 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i-~-~r~~p~qK~~iv~~l~~~g~~vlaiGD 867 (928)
... . -...|..|..+++.+......+++|||
T Consensus 121 -----------------------------------------------~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD 153 (206)
T 1rku_A 121 -----------------------------------------------DRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGD 153 (206)
T ss_dssp -----------------------------------------------SCEEEEECCSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred -----------------------------------------------ceEEeeecCCCchHHHHHHHHHhcCCEEEEEeC
Confidence 001 1 125677899999888556678999999
Q ss_pred ChhcHHHHHhCCeeEEecCCcchhhhh-cCcEe-ecccccchhhh
Q 002392 868 GANDVGMLQEADIGVGISGVEGMQAVM-SSDYA-IAQFRFLERLL 910 (928)
Q Consensus 868 G~ND~~ml~~A~vGIam~g~e~~~ak~-aAD~v-i~~f~~l~~ll 910 (928)
+.||+.|.+.||+++++.+.+. .+. +++++ +.++..+..+|
T Consensus 154 ~~~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 154 SYNDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp SSTTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHHH
T ss_pred ChhhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHHH
Confidence 9999999999999999844332 444 44554 66666666553
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.1e-06 Score=88.92 Aligned_cols=120 Identities=17% Similarity=0.104 Sum_probs=84.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 156 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI-------------------------------- 156 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE--------------------------------
Confidence 357899999999999999999999999988888888888874321111
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeC--cccHHHHHHHH-hc---C-CCE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVTRLV-KG---T-GKT 861 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~--p~qK~~iv~~l-~~---~-g~~ 861 (928)
+.+... ..-|..+++.+ +. . ...
T Consensus 157 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 157 --------------------------------------------------AGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp --------------------------------------------------EEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred --------------------------------------------------EeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 111111 12244444443 33 2 446
Q ss_pred EEEEcCChhcHHHHHhCCe---eEEecCCcchh-hhhcCcEeecccccchhhh
Q 002392 862 TLAIGDGANDVGMLQEADI---GVGISGVEGMQ-AVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 862 vlaiGDG~ND~~ml~~A~v---GIam~g~e~~~-ak~aAD~vi~~f~~l~~ll 910 (928)
+++|||+.||+.|.+.||+ +|++++..... .+..||+++.++..|..+|
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9999999999999999999 44443332221 2478999999999988774
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.17 E-value=4.4e-06 Score=84.18 Aligned_cols=124 Identities=10% Similarity=0.031 Sum_probs=83.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..++
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 136 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVL-------------------------------- 136 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEe--------------------------------
Confidence 478999999999999999999999999988888888888743211111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 137 ----------------------~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 172 (214)
T 3e58_A 137 ----------------------SGEEF----------------------KESKPNPEIYLTALKQLNVQASRALIIEDSE 172 (214)
T ss_dssp ----------------------EGGGC----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred ----------------------ecccc----------------------cCCCCChHHHHHHHHHcCCChHHeEEEeccH
Confidence 00000 0000011111223333322235699999999
Q ss_pred hcHHHHHhCCeeEEecCCc-chhhhhcCcEeecccccchhh
Q 002392 870 NDVGMLQEADIGVGISGVE-GMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 870 ND~~ml~~A~vGIam~g~e-~~~ak~aAD~vi~~f~~l~~l 909 (928)
||+.|.+.||+++.+.+.. ....+..||+++.++..|..+
T Consensus 173 ~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 173 KGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred hhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 9999999999988764321 111347899999998887765
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.16 E-value=6.9e-06 Score=84.47 Aligned_cols=41 Identities=15% Similarity=0.053 Sum_probs=38.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+.+++.+.|+.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999984
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.15 E-value=3.1e-06 Score=84.78 Aligned_cols=118 Identities=17% Similarity=0.183 Sum_probs=77.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+++.+.++.|++.|++++++|+....... ..+.+|+...-.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46899999999999999999999999877766 666666632100
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
.++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 129 -------------------~~~~~~~~----------------------~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~ 167 (207)
T 2go7_A 129 -------------------EILTSQSG----------------------FVRKPSPEAATYLLDKYQLNSDNTYYIGDRT 167 (207)
T ss_dssp -------------------EEECGGGC----------------------CCCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred -------------------eEEecCcC----------------------CCCCCCcHHHHHHHHHhCCCcccEEEECCCH
Confidence 01110000 0000001111223333322335699999999
Q ss_pred hcHHHHHhCCee-EEecCCcchhhhhcCcEeecccccchhh
Q 002392 870 NDVGMLQEADIG-VGISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 870 ND~~ml~~A~vG-Iam~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
||++|++.||++ |+|.+.. . .||+++.++..|..+
T Consensus 168 nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 168 LDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 999999999998 6775543 2 689999988887766
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.14 E-value=5.6e-06 Score=86.10 Aligned_cols=123 Identities=20% Similarity=0.193 Sum_probs=82.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 159 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--------------------------------- 159 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEE---------------------------------
Confidence 35789999999999999999999999999888899999887432111
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCc--ccHHHHHHHHhcCCCEEEEEc
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP--KQKALVTRLVKGTGKTTLAIG 866 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~l~~~g~~vlaiG 866 (928)
++.+... ....| +--..+.+.+.-....+++||
T Consensus 160 ---------------------~~~~~~~------------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~vG 194 (243)
T 2hsz_A 160 ---------------------MLGGQSL------------------------PEIKPHPAPFYYLCGKFGLYPKQILFVG 194 (243)
T ss_dssp ---------------------EECTTTS------------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred ---------------------EEecccC------------------------CCCCcCHHHHHHHHHHhCcChhhEEEEc
Confidence 1111000 00111 112223333322335699999
Q ss_pred CChhcHHHHHhCCeeE-EecC-C--cchhhhhcCcEeecccccchhh
Q 002392 867 DGANDVGMLQEADIGV-GISG-V--EGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 867 DG~ND~~ml~~A~vGI-am~g-~--e~~~ak~aAD~vi~~f~~l~~l 909 (928)
|+.||+.|.+.||+++ ++.. . .....+..||+++.++..|..+
T Consensus 195 D~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 195 DSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred CCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 9999999999999985 4432 1 1222466799999988877665
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.12 E-value=2.8e-06 Score=88.58 Aligned_cols=52 Identities=23% Similarity=0.289 Sum_probs=40.9
Q ss_pred cHHHHHHHH-hcCCCEEEEEcC----ChhcHHHHHhCCe-eEEecCCcchhhhhcCcEe
Q 002392 847 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEADI-GVGISGVEGMQAVMSSDYA 899 (928)
Q Consensus 847 qK~~iv~~l-~~~g~~vlaiGD----G~ND~~ml~~A~v-GIam~g~e~~~ak~aAD~v 899 (928)
.|+..++.+ .-....|+|||| |.||++||+.|+. |++|+|+... +|+.||||
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~-vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHH-HHHHHhhc
Confidence 798888888 112357999999 9999999999988 9999776443 89999986
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=3.4e-06 Score=87.86 Aligned_cols=43 Identities=21% Similarity=0.357 Sum_probs=36.6
Q ss_pred cHHHHHHHHhcCCCEEEEEcC----ChhcHHHHHhCC-eeEEecCCcc
Q 002392 847 QKALVTRLVKGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEG 889 (928)
Q Consensus 847 qK~~iv~~l~~~g~~vlaiGD----G~ND~~ml~~A~-vGIam~g~e~ 889 (928)
.|+..++.+.+....|+|||| |.||++||+.|+ +|++|++.+.
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~ 234 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKD 234 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHH
Confidence 799999998335678999999 799999999996 8999977543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.07 E-value=1e-05 Score=83.01 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=74.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.+.++.|++.|+++.++|+... +..+.+.+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999754 6667777777422111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
++.++. +-.....|+--..+.+.+.-....+++|||+.
T Consensus 136 --------------------i~~~~~----------------------~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~ 173 (233)
T 3nas_A 136 --------------------IVDPTT----------------------LAKGKPDPDIFLTAAAMLDVSPADCAAIEDAE 173 (233)
T ss_dssp --------------------ECCC-------------------------------CCHHHHHHHHHTSCGGGEEEEECSH
T ss_pred --------------------EeeHhh----------------------CCCCCCChHHHHHHHHHcCCCHHHEEEEeCCH
Confidence 011100 00011112212233333322335699999999
Q ss_pred hcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccch
Q 002392 870 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 870 ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~ 907 (928)
||+.|.+.||++++|.+.... .+ .||+++.++..+.
T Consensus 174 ~Di~~a~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 174 AGISAIKSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHHHHHHHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 999999999999998665432 34 8999999877755
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.06 E-value=5.7e-06 Score=84.68 Aligned_cols=120 Identities=15% Similarity=0.050 Sum_probs=83.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 143 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLI------------------------------- 143 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEE-------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeE-------------------------------
Confidence 3578999999999999999999999999888888888888743211110
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCc--ccHHHHHHHH-hcCC---CEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP--KQKALVTRLV-KGTG---KTT 862 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p--~qK~~iv~~l-~~~g---~~v 862 (928)
. +...+ .-|..+++.+ +..| ..+
T Consensus 144 -----------------------~----------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 144 -----------------------S----------------------------VDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp -----------------------E----------------------------GGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred -----------------------e----------------------------hhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 0 00001 1122233322 3333 569
Q ss_pred EEEcCChhcHHHHHhCCeeEEecC---CcchhhhhcCcEeecccccchhhh
Q 002392 863 LAIGDGANDVGMLQEADIGVGISG---VEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 863 laiGDG~ND~~ml~~A~vGIam~g---~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
++|||+.||+.|.+.||+++++-+ ......+..+|+++.++..|..+|
T Consensus 173 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 173 LFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 999999999999999999998822 222224568999999988887764
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.05 E-value=4.3e-06 Score=84.99 Aligned_cols=46 Identities=4% Similarity=0.008 Sum_probs=38.4
Q ss_pred CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccch
Q 002392 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~ 907 (928)
..+++|||+.||+.|++.||++++|.++.. ..+ .||+++.++..+.
T Consensus 163 ~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 163 SESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGCC
T ss_pred hHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhCC
Confidence 569999999999999999999999976543 255 8999998877643
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.05 E-value=4.5e-06 Score=85.77 Aligned_cols=126 Identities=10% Similarity=-0.011 Sum_probs=84.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..++.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------ 147 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLS------------------------------ 147 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEE------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEE------------------------------
Confidence 35789999999999999999999999999888888888887532111111
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG 868 (928)
+.... .....|.--..+.+.+.-....+++|||+
T Consensus 148 ------------------------~~~~~----------------------~~kp~~~~~~~~~~~~~~~~~~~~~vGD~ 181 (233)
T 3umb_A 148 ------------------------VDAVR----------------------LYKTAPAAYALAPRAFGVPAAQILFVSSN 181 (233)
T ss_dssp ------------------------GGGTT----------------------CCTTSHHHHTHHHHHHTSCGGGEEEEESC
T ss_pred ------------------------ecccC----------------------CCCcCHHHHHHHHHHhCCCcccEEEEeCC
Confidence 00000 00000111111222222223569999999
Q ss_pred hhcHHHHHhCCeeEEec---CCcchhhhhcCcEeecccccchhhh
Q 002392 869 ANDVGMLQEADIGVGIS---GVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 869 ~ND~~ml~~A~vGIam~---g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
.||+.|.+.||+++++- +......+..+|+++.++..|..+|
T Consensus 182 ~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 182 GWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 99999999999999882 2222224667999999999988874
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.05 E-value=4.8e-05 Score=81.23 Aligned_cols=58 Identities=21% Similarity=0.231 Sum_probs=46.9
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccc
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~ 904 (928)
..|...+..+ +..| ..+++|||+.||++|++.|++||+|++... ..+..||+++.+..
T Consensus 210 ~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~-~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 210 TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQ-EAKNLHNLITDSEY 271 (289)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCH-HHHHHCCCBCSSCH
T ss_pred CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccH-HHHHhCCEEcCCCC
Confidence 3688888777 5544 469999999999999999999999976543 37888999988643
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.02 E-value=8.6e-06 Score=83.31 Aligned_cols=125 Identities=16% Similarity=0.140 Sum_probs=83.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i-------------------------------- 129 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLI-------------------------------- 129 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEE--------------------------------
Confidence 357899999999999999999999999988888888888874221111
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG 868 (928)
+.+... ......|+--..+.+.+.-....+++|||+
T Consensus 130 ----------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~ 165 (222)
T 2nyv_A 130 ----------------------VGGDTF----------------------GEKKPSPTPVLKTLEILGEEPEKALIVGDT 165 (222)
T ss_dssp ----------------------ECTTSS----------------------CTTCCTTHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ----------------------EecCcC----------------------CCCCCChHHHHHHHHHhCCCchhEEEECCC
Confidence 110000 000111222222333332233569999999
Q ss_pred hhcHHHHHhCCee-EEecC-CcchhhhhcCcEeecccccchhhh
Q 002392 869 ANDVGMLQEADIG-VGISG-VEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 869 ~ND~~ml~~A~vG-Iam~g-~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
.||+.|.+.||++ |++.. ....+. ..+|+++.++..|..+|
T Consensus 166 ~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 166 DADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 9999999999998 66642 211112 67899999988887774
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.01 E-value=5.3e-06 Score=87.38 Aligned_cols=40 Identities=30% Similarity=0.302 Sum_probs=34.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988777777766665
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=8.7e-06 Score=86.64 Aligned_cols=124 Identities=15% Similarity=0.056 Sum_probs=83.7
Q ss_pred cCCCChHHHHHHHHHcCC--eEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGI--KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGI--kv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
++.+++.++++.|++.|+ +++++|+.....+..+.+.+|+...-..++.
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~----------------------------- 192 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTY----------------------------- 192 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEEC-----------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEE-----------------------------
Confidence 467899999999999999 9999999998888888888887532111110
Q ss_pred HHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hc---CC-CEE
Q 002392 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG---TG-KTT 862 (928)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~---~g-~~v 862 (928)
+.... . .. ..+.-|..+++.+ +. .. ..|
T Consensus 193 -------------------------~~~~~------------------~--~~--~~~Kp~~~~~~~~~~~lgi~~~~~~ 225 (282)
T 3nuq_A 193 -------------------------CDYSR------------------T--DT--LVCKPHVKAFEKAMKESGLARYENA 225 (282)
T ss_dssp -------------------------CCCSS------------------C--SS--CCCTTSHHHHHHHHHHHTCCCGGGE
T ss_pred -------------------------eccCC------------------C--cc--cCCCcCHHHHHHHHHHcCCCCcccE
Confidence 00000 0 00 0112233344333 32 33 579
Q ss_pred EEEcCChhcHHHHHhCCeeEEecCCcch-----hhhhcCcEeecccccchhh
Q 002392 863 LAIGDGANDVGMLQEADIGVGISGVEGM-----QAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 863 laiGDG~ND~~ml~~A~vGIam~g~e~~-----~ak~aAD~vi~~f~~l~~l 909 (928)
++|||+.||+.|.+.||+|++|...... .....||+++.++..|..+
T Consensus 226 i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp EEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred EEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 9999999999999999998877433221 1134789999999888877
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.1e-05 Score=89.32 Aligned_cols=42 Identities=7% Similarity=0.131 Sum_probs=39.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++.|++++.|+.|+++|++|+|+||.....+..+|.++|+.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcc
Confidence 347899999999999999999999999999999999999873
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.99 E-value=1.3e-05 Score=82.16 Aligned_cols=41 Identities=22% Similarity=0.201 Sum_probs=36.6
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~a-GIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999988888888888874
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.97 E-value=2.4e-05 Score=80.26 Aligned_cols=115 Identities=15% Similarity=0.105 Sum_probs=78.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i--------------------------------- 149 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSI--------------------------------- 149 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeE---------------------------------
Confidence 47899999999999999999999999988888888888874321111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccH------HHHHHHHhcCCC-EE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK------ALVTRLVKGTGK-TT 862 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK------~~iv~~l~~~g~-~v 862 (928)
+.+...+..| ..+.+.+.-... .+
T Consensus 150 -------------------------------------------------~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~ 180 (231)
T 3kzx_A 150 -------------------------------------------------IGSGDTGTIKPSPEPVLAALTNINIEPSKEV 180 (231)
T ss_dssp -------------------------------------------------EEETSSSCCTTSSHHHHHHHHHHTCCCSTTE
T ss_pred -------------------------------------------------EcccccCCCCCChHHHHHHHHHcCCCcccCE
Confidence 1111111111 223333322234 79
Q ss_pred EEEcCChhcHHHHHhCCe-eEEecCCcchhhhhcCcEeecccccchhhh
Q 002392 863 LAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 863 laiGDG~ND~~ml~~A~v-GIam~g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
++|||+.||+.|.+.||+ +|.+.+... ..+|+++.++..|..+|
T Consensus 181 v~vGD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 181 FFIGDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 999999999999999997 556644332 46889999988887763
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.8e-05 Score=80.81 Aligned_cols=115 Identities=17% Similarity=0.008 Sum_probs=80.4
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAG-IKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aG-Ikv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
++.+++.+.++.|++.| +++.++|+.....+..+.+.+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 56899999999999999 9999999988877777777777632110
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLA 864 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vla 864 (928)
.+++...| |..+++.+ +..| ..+++
T Consensus 151 -------------------------------------------------~~~~~~kp--k~~~~~~~~~~lgi~~~~~i~ 179 (234)
T 3ddh_A 151 -------------------------------------------------HIEVMSDK--TEKEYLRLLSILQIAPSELLM 179 (234)
T ss_dssp -------------------------------------------------EEEEESCC--SHHHHHHHHHHHTCCGGGEEE
T ss_pred -------------------------------------------------eeeecCCC--CHHHHHHHHHHhCCCcceEEE
Confidence 12222222 44455444 4434 56999
Q ss_pred EcCCh-hcHHHHHhCCeeEEec--C----Ccchhhhh-cCcEeecccccchhh
Q 002392 865 IGDGA-NDVGMLQEADIGVGIS--G----VEGMQAVM-SSDYAIAQFRFLERL 909 (928)
Q Consensus 865 iGDG~-ND~~ml~~A~vGIam~--g----~e~~~ak~-aAD~vi~~f~~l~~l 909 (928)
|||+. ||+.|.+.||+++++- | ........ .+|+++.++..|..+
T Consensus 180 iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 180 VGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred ECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 99996 9999999999998762 1 11111233 349999998887765
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.94 E-value=1.3e-05 Score=84.66 Aligned_cols=41 Identities=32% Similarity=0.167 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57899999999999999999999999988888887777764
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.2e-05 Score=82.52 Aligned_cols=121 Identities=13% Similarity=0.111 Sum_probs=80.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc---HhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDK---METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 786 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~---~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (928)
.+.+++.+.++.|++.|++++++|+.. ...+..+.+.+|+...-..+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~------------------------------ 148 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKT------------------------------ 148 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEE------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhh------------------------------
Confidence 358999999999999999999999998 77777777777764211111
Q ss_pred HHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEE
Q 002392 787 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTT 862 (928)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~v 862 (928)
+.+... ....| +..+...+ +..| ..+
T Consensus 149 ------------------------~~~~~~------------------------~~~kp--~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 149 ------------------------FFADEV------------------------LSYKP--RKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp ------------------------EEHHHH------------------------TCCTT--CHHHHHHHHHHTTCCGGGE
T ss_pred ------------------------eecccc------------------------CCCCC--CHHHHHHHHHHcCCCccce
Confidence 000000 00011 12222222 4444 569
Q ss_pred EEEcCCh-hcHHHHHhCCeeEEec--CCcchhhhhcCcEeecccccchhhh
Q 002392 863 LAIGDGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 863 laiGDG~-ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
++|||+. ||+.|.+.||+++++- +......+..+|+++.++..|..+|
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVI 229 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHH
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHH
Confidence 9999999 9999999999999882 2222224556899999888877663
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.89 E-value=1.1e-05 Score=81.31 Aligned_cols=116 Identities=16% Similarity=0.217 Sum_probs=78.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+...-.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 126 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 126 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc-----------------------------------
Confidence 4689999999999999 9999999999888888887777632100
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccH--HHHHHHH-hcC---CCEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK--ALVTRLV-KGT---GKTTL 863 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK--~~iv~~l-~~~---g~~vl 863 (928)
.++.+. .....| ...+..+ +.. ...++
T Consensus 127 -------------------~~~~~~----------------------------~~~~~KP~~~~~~~~~~~~~~~~~~~i 159 (209)
T 2hdo_A 127 -------------------VTISAD----------------------------DTPKRKPDPLPLLTALEKVNVAPQNAL 159 (209)
T ss_dssp -------------------EEECGG----------------------------GSSCCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred -------------------EEEecC----------------------------cCCCCCCCcHHHHHHHHHcCCCcccEE
Confidence 011110 001122 2222222 333 35699
Q ss_pred EEcCChhcHHHHHhCCeeEEecC--C-cchhhhhcCcEeecccccchhh
Q 002392 864 AIGDGANDVGMLQEADIGVGISG--V-EGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 864 aiGDG~ND~~ml~~A~vGIam~g--~-e~~~ak~aAD~vi~~f~~l~~l 909 (928)
+|||+.||+.|.+.||+++++.+ . .....+. ||+++.++..|..+
T Consensus 160 ~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 160 FIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILEL 207 (209)
T ss_dssp EEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGG
T ss_pred EECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHh
Confidence 99999999999999999998732 2 1222344 99999988877665
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=2.1e-05 Score=81.27 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=37.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999988888888888874
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.2e-05 Score=83.68 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=40.3
Q ss_pred CEEEEEcCChhcHHHHHhCCeeE---EecCCcchhhhhcCcEeecccccchhhhh
Q 002392 860 KTTLAIGDGANDVGMLQEADIGV---GISGVEGMQAVMSSDYAIAQFRFLERLLL 911 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGI---am~g~e~~~ak~aAD~vi~~f~~l~~lll 911 (928)
..+++|||+.||+.|.+.||+.+ ++++.. ...+..||+++.++..|..+|+
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~-~~~~~~ad~v~~sl~el~~~l~ 244 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLS-RDLTTKATLVLNSLQDFQPELF 244 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSC-GGGSTTSSEECSCGGGCCGGGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCc-hhhcccccEeecCHHHhhHHHh
Confidence 67999999999999999999654 443332 2367899999999988877644
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.88 E-value=1.6e-05 Score=81.53 Aligned_cols=124 Identities=11% Similarity=0.081 Sum_probs=81.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 143 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLS------------------------------- 143 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEE-------------------------------
Confidence 5789999999999999999999999998888888888887432111110
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
+.... .....|.--..+.+.+.-....+++|||+.
T Consensus 144 -----------------------~~~~~----------------------~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 178 (232)
T 1zrn_A 144 -----------------------VDPVQ----------------------VYKPDNRVYELAEQALGLDRSAILFVASNA 178 (232)
T ss_dssp -----------------------SGGGT----------------------CCTTSHHHHHHHHHHHTSCGGGEEEEESCH
T ss_pred -----------------------ecccC----------------------CCCCCHHHHHHHHHHcCCCcccEEEEeCCH
Confidence 00000 000011111122233322234699999999
Q ss_pred hcHHHHHhCCeeEEecCC---cchhhhhcCcEeecccccchhh
Q 002392 870 NDVGMLQEADIGVGISGV---EGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 870 ND~~ml~~A~vGIam~g~---e~~~ak~aAD~vi~~f~~l~~l 909 (928)
||+.|.+.||+++.+-.. .....+..+|+++.++..|..+
T Consensus 179 ~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 179 WDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp HHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 999999999999877221 1122345789999988777665
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.4e-05 Score=78.58 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=38.2
Q ss_pred CCEEEEEcCChhcHHHHHhCCee-EEec-CCcchhhh----hcCcEeecccccchhhhh
Q 002392 859 GKTTLAIGDGANDVGMLQEADIG-VGIS-GVEGMQAV----MSSDYAIAQFRFLERLLL 911 (928)
Q Consensus 859 g~~vlaiGDG~ND~~ml~~A~vG-Iam~-g~e~~~ak----~aAD~vi~~f~~l~~lll 911 (928)
...+++|||+.||+.|.+.||+. |++. |....... ..+|+++.++..|..+|+
T Consensus 118 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 118 LAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred HHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 35699999999999999999973 3332 32221122 458999999998888754
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.85 E-value=4.1e-05 Score=77.42 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=81.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+...-..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 128 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG---------------------------------- 128 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee----------------------------------
Confidence 467999999999999 999999999888888888888887432111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlai 865 (928)
++++...+.-|..+...+ ++.| ..+++|
T Consensus 129 ------------------------------------------------i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 129 ------------------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp ------------------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred ------------------------------------------------eecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 122221122345555444 5554 469999
Q ss_pred cCChhcHHHHHhCCe---eEEecCCcchhhh-hcCcEeecccccchhh
Q 002392 866 GDGANDVGMLQEADI---GVGISGVEGMQAV-MSSDYAIAQFRFLERL 909 (928)
Q Consensus 866 GDG~ND~~ml~~A~v---GIam~g~e~~~ak-~aAD~vi~~f~~l~~l 909 (928)
||+.||+.|.+.||+ +|+++.......+ ..+|+++.++..|..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999999999 4444333222233 3589999988776654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.84 E-value=2.3e-05 Score=80.36 Aligned_cols=119 Identities=17% Similarity=0.197 Sum_probs=80.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+++.+.++.|++. +++.++|+.....+..+.+.+|+...-..+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~--------------------------------- 145 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSI--------------------------------- 145 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHccee---------------------------------
Confidence 4679999999999999 999999999988888888888874321111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcC---CCEEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT---GKTTLAI 865 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~---g~~vlai 865 (928)
+.+... ....| |..+++.+ +.. ...+++|
T Consensus 146 ---------------------~~~~~~------------------------~~~kp--~~~~~~~~~~~~~~~~~~~~~v 178 (234)
T 3u26_A 146 ---------------------TTSEEA------------------------GFFKP--HPRIFELALKKAGVKGEEAVYV 178 (234)
T ss_dssp ---------------------EEHHHH------------------------TBCTT--SHHHHHHHHHHHTCCGGGEEEE
T ss_pred ---------------------Eecccc------------------------CCCCc--CHHHHHHHHHHcCCCchhEEEE
Confidence 000000 00011 12222222 333 3569999
Q ss_pred cCCh-hcHHHHHhCCe---eEEecCCcchhhhhcCcEeecccccchhhh
Q 002392 866 GDGA-NDVGMLQEADI---GVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 866 GDG~-ND~~ml~~A~v---GIam~g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
||+. ||+.|.+.||+ +|++++.. ...+..||+++.++..|..+|
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~~-~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 179 GDNPVKDCGGSKNLGMTSILLDRKGEK-REFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECSSSTT-GGGGGGCSEEESSTHHHHHHH
T ss_pred cCCcHHHHHHHHHcCCEEEEECCCCCc-cccccCCCEeeCCHHHHHHHH
Confidence 9997 99999999995 55554433 225668999999988887774
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.82 E-value=2e-05 Score=82.55 Aligned_cols=42 Identities=14% Similarity=0.060 Sum_probs=37.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-.+.+++.++++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 456799999999999999999999999988888888888873
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.82 E-value=7.5e-05 Score=76.59 Aligned_cols=121 Identities=18% Similarity=0.159 Sum_probs=83.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-.+.+++.++++.|++. +++.++|+.....+....+.+|+...-..++
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 149 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIF------------------------------- 149 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEE-------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEE-------------------------------
Confidence 35789999999999999 9999999999888888888888743211110
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC----CEEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG----KTTL 863 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g----~~vl 863 (928)
.+... -...-|..+++.+ +..| ..++
T Consensus 150 -----------------------~~~~~--------------------------~~~kp~~~~~~~~~~~~g~~~~~~~i 180 (238)
T 3ed5_A 150 -----------------------VSEDT--------------------------GFQKPMKEYFNYVFERIPQFSAEHTL 180 (238)
T ss_dssp -----------------------EGGGT--------------------------TSCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred -----------------------Eeccc--------------------------CCCCCChHHHHHHHHHcCCCChhHeE
Confidence 00000 0011123344333 5555 4699
Q ss_pred EEcCCh-hcHHHHHhCCeeE-Eec-CCcchhhhhcCcEeecccccchhhh
Q 002392 864 AIGDGA-NDVGMLQEADIGV-GIS-GVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 864 aiGDG~-ND~~ml~~A~vGI-am~-g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
+|||+. ||+.|.+.||++. .+. +......+..||+++.++..|..+|
T Consensus 181 ~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 181 IIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred EECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 999998 9999999999965 443 2222225678999999999988884
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.82 E-value=2.3e-05 Score=81.01 Aligned_cols=137 Identities=13% Similarity=0.175 Sum_probs=87.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.++|+.|+++|++++++|+.....+..+.+ |+... ..++......
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~-------------------------- 127 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF-------------------------- 127 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC--------------------------
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE--------------------------
Confidence 588999999999999999999999999888877776 66432 2222111000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
.+..+.... ..... ..+.+.....|..+++.+......+++|||+.
T Consensus 128 ----------------------~~~~~~~~~-----------~kp~p-~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~ 173 (236)
T 2fea_A 128 ----------------------DNDYIHIDW-----------PHSCK-GTCSNQCGCCKPSVIHELSEPNQYIIMIGDSV 173 (236)
T ss_dssp ----------------------SSSBCEEEC-----------TTCCC-TTCCSCCSSCHHHHHHHHCCTTCEEEEEECCG
T ss_pred ----------------------cCCceEEec-----------CCCCc-cccccccCCcHHHHHHHHhccCCeEEEEeCCh
Confidence 000000000 00000 00111124568888888865567899999999
Q ss_pred hcHHHHHhCCeeEEecCCcchhhhhc--CcEeecccccchhhh
Q 002392 870 NDVGMLQEADIGVGISGVEGMQAVMS--SDYAIAQFRFLERLL 910 (928)
Q Consensus 870 ND~~ml~~A~vGIam~g~e~~~ak~a--AD~vi~~f~~l~~ll 910 (928)
+|+.|.+.||+.++..+.. ..+... +|+++.++..|..+|
T Consensus 174 ~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 174 TDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp GGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHHH
T ss_pred HHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHHH
Confidence 9999999999988753321 113333 889999888877763
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.79 E-value=8.9e-05 Score=76.57 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=36.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46799999999999999999999999888888888888874
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.76 E-value=2.9e-05 Score=80.32 Aligned_cols=41 Identities=17% Similarity=0.245 Sum_probs=31.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
-++.+++.+.++.|++.|++++++|+.....+...... |+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 147 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP 147 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH
Confidence 46789999999999999999999999887666666555 653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.73 E-value=2.9e-05 Score=80.42 Aligned_cols=40 Identities=18% Similarity=0.190 Sum_probs=33.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
-++.+++.+.++.|++.|+++.++|+.....+...... |+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 147 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NF 147 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hH
Confidence 35789999999999999999999999887666555555 55
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.73 E-value=4.4e-05 Score=78.38 Aligned_cols=119 Identities=18% Similarity=0.180 Sum_probs=83.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+++.++++.|+ .|++++++|+.....+..+.+.+|+...-..++
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 153 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKII-------------------------------- 153 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEE--------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEE--------------------------------
Confidence 56899999999999 999999999998888888888888743211111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlai 865 (928)
.+... ....-|..+++.+ +..| ..+++|
T Consensus 154 ----------------------~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 154 ----------------------LSEDL--------------------------GVLKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp ----------------------EGGGT--------------------------TCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred ----------------------EeccC--------------------------CCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 00000 0011123333333 4444 569999
Q ss_pred cCCh-hcHHHHHhCCeeEEecCCcc-hhhhhcCcEeecccccchhh
Q 002392 866 GDGA-NDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 866 GDG~-ND~~ml~~A~vGIam~g~e~-~~ak~aAD~vi~~f~~l~~l 909 (928)
||+. ||+.|.+.||+++++.+... ......+|+++.++..+..+
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 9995 99999999999998854432 12566899999999888877
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.67 E-value=6.2e-05 Score=77.83 Aligned_cols=41 Identities=17% Similarity=0.111 Sum_probs=35.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+++|+++.++|+.....+..+.+.+|+.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 150 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG 150 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 36699999999999999999999998888777777777763
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=7.7e-05 Score=75.58 Aligned_cols=51 Identities=20% Similarity=0.330 Sum_probs=37.6
Q ss_pred CEEEEEcCChhcHHHHHhCCee--EEec-CCc-chhhhhcCcEeecccccchhhh
Q 002392 860 KTTLAIGDGANDVGMLQEADIG--VGIS-GVE-GMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vG--Iam~-g~e-~~~ak~aAD~vi~~f~~l~~ll 910 (928)
..+++|||+.||+.|.+.||+. |++. |.. .......+|+++.++..|..+|
T Consensus 149 ~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 149 AASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp GGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred HHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 5689999999999999999975 4552 221 1112345999999988887763
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.66 E-value=5.3e-05 Score=78.53 Aligned_cols=122 Identities=7% Similarity=-0.011 Sum_probs=83.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.++++.|++. +++.++|+.....+..+.+.+|+.-. .-
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~--------~~--------------------------- 159 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD--------VI--------------------------- 159 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS--------CC---------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee--------EE---------------------------
Confidence 5679999999999997 99999999998888888888887300 00
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlai 865 (928)
+.+.. + ....| |..+++.+ +..| ..+++|
T Consensus 160 ---------------------~~~~~-----------------------~-~~~kp--~~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 160 ---------------------IGSDI-----------------------N-RKYKP--DPQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp ---------------------CCHHH-----------------------H-TCCTT--SHHHHHHHHHHTTCCGGGEEEE
T ss_pred ---------------------EEcCc-----------------------C-CCCCC--CHHHHHHHHHHcCCChHHEEEE
Confidence 00000 0 00111 23333333 4444 569999
Q ss_pred cCChhcHHHHHhCCeeEEecCCcc-------hh--hhhcCcEeecccccchhhhhhhc
Q 002392 866 GDGANDVGMLQEADIGVGISGVEG-------MQ--AVMSSDYAIAQFRFLERLLLVHG 914 (928)
Q Consensus 866 GDG~ND~~ml~~A~vGIam~g~e~-------~~--ak~aAD~vi~~f~~l~~lll~~G 914 (928)
||+.||+.|.+.||++++|.+... .. .+..+|+++.++..|..+|..++
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~~ 250 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAGS 250 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHCC
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCCC
Confidence 999999999999999998854211 00 25679999999999988854443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.64 E-value=8e-05 Score=77.64 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=35.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+ |+++.++|+.....+..+.+.+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999998888888888874
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0001 Score=73.63 Aligned_cols=118 Identities=14% Similarity=0.109 Sum_probs=78.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.+ ++.|++. +++.++|+.....+..+.+.+|+...-..+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 118 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGI--------------------------------- 118 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEE---------------------------------
Confidence 56799999 9999999 999999999988888888888874321111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcC-CCEEEEEcC
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT-GKTTLAIGD 867 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~-g~~vlaiGD 867 (928)
+.+.... ...| +..+...+ +.. ...+++|||
T Consensus 119 ---------------------~~~~~~~------------------------~~Kp--~~~~~~~~~~~~~~~~~~~vGD 151 (201)
T 2w43_A 119 ---------------------FSAESVK------------------------EYKP--SPKVYKYFLDSIGAKEAFLVSS 151 (201)
T ss_dssp ---------------------EEGGGGT------------------------CCTT--CHHHHHHHHHHHTCSCCEEEES
T ss_pred ---------------------EehhhcC------------------------CCCC--CHHHHHHHHHhcCCCcEEEEeC
Confidence 1110000 0111 12222222 222 467999999
Q ss_pred ChhcHHHHHhCCeeEEecC---CcchhhhhcCcEeecccccchhh
Q 002392 868 GANDVGMLQEADIGVGISG---VEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 868 G~ND~~ml~~A~vGIam~g---~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
+.||+.|.+.||+++.+-. .........+|+++.++..|..+
T Consensus 152 ~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 152 NAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp CHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred CHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 9999999999999976621 11111345699999988877666
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00011 Score=74.97 Aligned_cols=51 Identities=12% Similarity=0.272 Sum_probs=39.8
Q ss_pred CEEEEEcCChhcHHHHHhCCee-EEecCCcc------hhhhhc-CcEeecccccchhhh
Q 002392 860 KTTLAIGDGANDVGMLQEADIG-VGISGVEG------MQAVMS-SDYAIAQFRFLERLL 910 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vG-Iam~g~e~------~~ak~a-AD~vi~~f~~l~~ll 910 (928)
..+++|||+.||+.|++.||++ |++.+... ...++. ||+++.++..|..+|
T Consensus 161 ~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 161 DRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred hHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 5699999999999999999998 66654322 125566 999999888877663
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00012 Score=77.37 Aligned_cols=40 Identities=15% Similarity=-0.069 Sum_probs=35.2
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~a-GIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
.+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 3579999999999999 999999999998888777777776
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.56 E-value=7.7e-05 Score=77.48 Aligned_cols=118 Identities=8% Similarity=0.008 Sum_probs=80.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.++++.|++. ++++++|+.....+..+.+.+|+.- ..
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f--~~---------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW--DM---------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC--SE----------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc--ce----------------------------------
Confidence 4678999999999985 9999999998888888888888730 00
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlai 865 (928)
++.++. + ....-|..+++.+ +..| ..|++|
T Consensus 163 --------------------~~~~~~-----------------------~---~~~kp~~~~~~~~~~~lgi~~~~~~~i 196 (254)
T 3umc_A 163 --------------------LLCADL-----------------------F---GHYKPDPQVYLGACRLLDLPPQEVMLC 196 (254)
T ss_dssp --------------------ECCHHH-----------------------H---TCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEeecc-----------------------c---ccCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 000000 0 0011233333333 3333 569999
Q ss_pred cCChhcHHHHHhCCeeEEecCC-------cchhh--hhcCcEeecccccchhhh
Q 002392 866 GDGANDVGMLQEADIGVGISGV-------EGMQA--VMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 866 GDG~ND~~ml~~A~vGIam~g~-------e~~~a--k~aAD~vi~~f~~l~~ll 910 (928)
||+.||+.|.+.||++++|.+. ..... +..||+++.++..|..+|
T Consensus 197 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 197 AAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred cCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 9999999999999999988551 11112 567999999998888773
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00011 Score=77.28 Aligned_cols=44 Identities=9% Similarity=0.074 Sum_probs=36.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcC---CcHhhHHHHHHHcCCccc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLRQ 752 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTG---D~~~ta~~ia~~~gi~~~ 752 (928)
+.+-++++++|++|+++|++++++|| +..........++|+...
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44557899999999999999999988 677777777888888533
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00025 Score=70.24 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=37.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc-HhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDK-METAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~-~~ta~~ia~~~gi~ 750 (928)
++.+++.++|+.|+++|++++++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 68888888888884
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.49 E-value=9.3e-05 Score=77.74 Aligned_cols=124 Identities=10% Similarity=0.039 Sum_probs=79.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+++.++++.|++.|+++.++|+... .+..+.+.+|+...-..+
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~--------------------------------- 151 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFV--------------------------------- 151 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCE---------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEE---------------------------------
Confidence 4679999999999999999999999665 457777778874321111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
+.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 152 ---------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~ 188 (263)
T 3k1z_A 152 ---------------------LTSEAA----------------------GWPKPDPRIFQEALRLAHMEPVVAAHVGDNY 188 (263)
T ss_dssp ---------------------EEHHHH----------------------SSCTTSHHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred ---------------------Eeeccc----------------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCc
Confidence 000000 0000111111222333322235699999997
Q ss_pred -hcHHHHHhCCeeEEecCCcch--h---hhhcCcEeecccccchhhh
Q 002392 870 -NDVGMLQEADIGVGISGVEGM--Q---AVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 870 -ND~~ml~~A~vGIam~g~e~~--~---ak~aAD~vi~~f~~l~~ll 910 (928)
||+.|.+.||+++.+.+.... . ....+|+++.++..|..+|
T Consensus 189 ~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 189 LCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 999999999999987443221 0 1226999999999988875
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00019 Score=70.72 Aligned_cols=39 Identities=15% Similarity=0.308 Sum_probs=32.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
+.+++.+.++.|++.|++++++|+... .+..+...+|+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~ 121 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIA 121 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCH
Confidence 679999999999999999999999764 456666666663
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00025 Score=74.60 Aligned_cols=45 Identities=13% Similarity=0.023 Sum_probs=37.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcC---CcHhhHHHHHHHcCCccc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLRQ 752 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTG---D~~~ta~~ia~~~gi~~~ 752 (928)
.+.+-++++++|++|+++|++++++|| +.........+.+|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 555667899999999999999999999 677777777788888543
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00092 Score=69.89 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=36.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEc---CCcHhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilT---GD~~~ta~~ia~~~gi~ 750 (928)
+-+++.++++.+++.|++++++| |+...........+|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99998888888888874
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00011 Score=75.29 Aligned_cols=51 Identities=10% Similarity=-0.004 Sum_probs=40.4
Q ss_pred CEEEEEcCCh-hcHHHHHhCCeeEEecCCc----------chhhhhcCcEeecccccchhhh
Q 002392 860 KTTLAIGDGA-NDVGMLQEADIGVGISGVE----------GMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 860 ~~vlaiGDG~-ND~~ml~~A~vGIam~g~e----------~~~ak~aAD~vi~~f~~l~~ll 910 (928)
..+++|||+. ||+.|.+.||++++|.+.. ....+..||+++.++..|..+|
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 173 KDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred hhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 5699999996 9999999999999884322 1223578999999988877764
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00091 Score=69.29 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=34.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+.+++.+.++.|+ .|++++++|+.....+......+|+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~ 151 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS 151 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH
Confidence 56899999999999 99999999998877777777766663
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00093 Score=66.15 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=36.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcH---hhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKM---ETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~---~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+++|++++++|+... ..+..+.+.+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 5889999999999999999999998776 7788888888884
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0003 Score=71.50 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=36.6
Q ss_pred CEEEEEcCChhcHHHHHhCCeeE--Eec-CCcc-hhhhhcCcEeecccccchhhhh
Q 002392 860 KTTLAIGDGANDVGMLQEADIGV--GIS-GVEG-MQAVMSSDYAIAQFRFLERLLL 911 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGI--am~-g~e~-~~ak~aAD~vi~~f~~l~~lll 911 (928)
..++||||+.||+.|.+.||+.. .+. |... ......+|+++.++..|..+|-
T Consensus 155 ~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l~ 210 (218)
T 2o2x_A 155 QRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIE 210 (218)
T ss_dssp GGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHH
T ss_pred HHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHHH
Confidence 46999999999999999999864 332 2211 1123457888888877777643
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0013 Score=69.02 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=38.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEc---CCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilT---GD~~~ta~~ia~~~gi~ 750 (928)
.++-+++.++|++|+++|++++++| |+.........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 6677999999999999999999999 89988888888888874
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.001 Score=67.64 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=39.5
Q ss_pred CEEEEEcCCh-hcHHHHHhCCeeEEec--CCcchhhhhcCcEeecccccchhhh
Q 002392 860 KTTLAIGDGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQFRFLERLL 910 (928)
Q Consensus 860 ~~vlaiGDG~-ND~~ml~~A~vGIam~--g~e~~~ak~aAD~vi~~f~~l~~ll 910 (928)
..+++|||+. ||+.|.+.||+++.+- +.........+|+++.++..|..+|
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 173 SAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred hheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 5699999997 9999999999998662 2211112567999999999888774
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0011 Score=69.47 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=37.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEc---CCcHhhHHHHHHHcCCcccC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLLRQE 753 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilT---GD~~~ta~~ia~~~gi~~~~ 753 (928)
.+ ++++++|++++++|++++++| |+.........+++|+....
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~ 67 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPL 67 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 35 899999999999999999999 88888888888899985443
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00081 Score=69.16 Aligned_cols=61 Identities=15% Similarity=0.176 Sum_probs=42.2
Q ss_pred cHHHHHHHH-hcCC---CEEEEEcCC-hhcHHHHHhCCeeEEe--cCC-cchhhh---hcCcEeecccccch
Q 002392 847 QKALVTRLV-KGTG---KTTLAIGDG-ANDVGMLQEADIGVGI--SGV-EGMQAV---MSSDYAIAQFRFLE 907 (928)
Q Consensus 847 qK~~iv~~l-~~~g---~~vlaiGDG-~ND~~ml~~A~vGIam--~g~-e~~~ak---~aAD~vi~~f~~l~ 907 (928)
.|...++.+ +..| ..|+||||+ .||+.|++.||+++++ .|. ...+.+ ..+|+++.++..|.
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHhh
Confidence 355555555 4444 569999999 7999999999999754 232 212233 46999998877654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00074 Score=67.15 Aligned_cols=40 Identities=13% Similarity=0.012 Sum_probs=35.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.+.++.|++.| +++++|+.....+..+.+.+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999988888888888874
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0033 Score=63.27 Aligned_cols=42 Identities=21% Similarity=0.188 Sum_probs=38.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999999999853
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.00055 Score=68.74 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=30.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~ 746 (928)
++.+++.++++.|++ |++++++|+.....+..+.+.
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999887776666555
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0047 Score=60.47 Aligned_cols=53 Identities=17% Similarity=0.197 Sum_probs=35.9
Q ss_pred EEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHH
Q 002392 615 LLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEK 694 (928)
Q Consensus 615 l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ 694 (928)
.+.-|....|.+.- -...+.....+..+..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~~g----i~i~~~~~~~~~~~~~~G~T~V~va------------------------------------- 171 (185)
T 2kmv_A 133 KVLIGNREWMIRNG----LVINNDVNDFMTEHERKGRTAVLVA------------------------------------- 171 (185)
T ss_dssp EEEEECHHHHHHHT----CCCCHHHHHHHHHHHHTTCEEEEEE-------------------------------------
T ss_pred EEEECCHHHHHHcC----CCCCHHHHHHHHHHHhCCCeEEEEE-------------------------------------
Confidence 34458877664321 1122334456677888999988888
Q ss_pred hhcCceEEEEeeeccc
Q 002392 695 IERDLILLGATAVEDK 710 (928)
Q Consensus 695 iE~~l~llG~~~ieD~ 710 (928)
.|-.++|++++.|+
T Consensus 172 --idg~l~g~iavaD~ 185 (185)
T 2kmv_A 172 --VDDELCGLIAIADT 185 (185)
T ss_dssp --ETTEEEEEEEEECC
T ss_pred --ECCEEEEEEEEEcC
Confidence 46789999999985
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0028 Score=66.15 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++++.|++ |+++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 577999999999998 5999999999988888888888874
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0077 Score=59.84 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=29.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 743 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~i 743 (928)
++.+++.++++.|+++|+++.++||.....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 5789999999999999999999999887766433
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0041 Score=64.46 Aligned_cols=118 Identities=14% Similarity=0.207 Sum_probs=76.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-..+
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i-------------------------------- 160 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFI-------------------------------- 160 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEE--------------------------------
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccccee--------------------------------
Confidence 4678999999999999999999988764 356667778875321111
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG 868 (928)
+.+... -.....|+-=..+.+.+.-....+++|||+
T Consensus 161 ----------------------~~~~~~----------------------~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs 196 (250)
T 4gib_A 161 ----------------------ADAGKC----------------------KNNKPHPEIFLMSAKGLNVNPQNCIGIEDA 196 (250)
T ss_dssp ----------------------CCGGGC----------------------CSCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ----------------------eccccc----------------------CCCCCcHHHHHHHHHHhCCChHHeEEECCC
Confidence 111000 000112222222333332233569999999
Q ss_pred hhcHHHHHhCCe-eEEecCCcchhhhhcCcEeecccccch
Q 002392 869 ANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 869 ~ND~~ml~~A~v-GIam~g~e~~~ak~aAD~vi~~f~~l~ 907 (928)
.+|+.+-+.||+ .|++.+.+. ...||+++.++..|.
T Consensus 197 ~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 197 SAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQLK 233 (250)
T ss_dssp HHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGCC
T ss_pred HHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhCC
Confidence 999999999998 567755443 346899999888763
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.00049 Score=63.76 Aligned_cols=42 Identities=12% Similarity=0.021 Sum_probs=35.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.++.|++.++++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 346788999999999999999999999888877777777663
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.01 Score=63.87 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=37.9
Q ss_pred eecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 706 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 706 ~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
.....+.+++.+.|+.|+++|++|||+||-...-+..+|..+
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344467899999999999999999999999999999999886
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0059 Score=62.91 Aligned_cols=43 Identities=7% Similarity=0.101 Sum_probs=36.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHh----hHHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKME----TAINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~----ta~~ia~~~gi~ 750 (928)
+.++.|++.+.|+.|+++|+++.++||++.. .+..-.+.+||.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4678899999999999999999999999764 556666777874
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.031 Score=59.68 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=36.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEc---CCcHhhHHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilT---GD~~~ta~~ia~~~gi~ 750 (928)
.+++-+++.++|+.|+++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 56677899999999999999999999 57777776677777774
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0076 Score=66.33 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
++.||+.++++.|+++|+++.++|+.....+..+.+.+|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999988888888888853
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.00059 Score=68.15 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=26.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
++.+++.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 567999999999999999999999976543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0084 Score=61.85 Aligned_cols=43 Identities=16% Similarity=0.087 Sum_probs=35.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHh----hHHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKME----TAINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~----ta~~ia~~~gi~ 750 (928)
+.++.|++.+.++.|+++|+++.++||++.. .+..-.+.+||.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 4678899999999999999999999999764 455556677774
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.033 Score=56.54 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=35.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCC
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi 749 (928)
-++.|++.++++.|+++| ++.++|+.....+..+.+.+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888888888776
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0049 Score=62.71 Aligned_cols=35 Identities=11% Similarity=0.006 Sum_probs=29.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY 745 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~ 745 (928)
++.+++.++++.|++. +++.++|+.....+..+.+
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 3668999999999999 9999999998887776653
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.012 Score=59.28 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=34.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|+++|++++++|+... .+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5779999999999999999999999876 467777777874
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.28 E-value=0.09 Score=54.12 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=41.9
Q ss_pred HHHHHHHH-hcCC---CEEEEEcCCh-hcHHHHHhCCeeE-Ee-cCCc-chhh---hhcCcEeecccccchhh
Q 002392 848 KALVTRLV-KGTG---KTTLAIGDGA-NDVGMLQEADIGV-GI-SGVE-GMQA---VMSSDYAIAQFRFLERL 909 (928)
Q Consensus 848 K~~iv~~l-~~~g---~~vlaiGDG~-ND~~ml~~A~vGI-am-~g~e-~~~a---k~aAD~vi~~f~~l~~l 909 (928)
|..+.+.+ ++.| ..+++|||+. ||+.|.+.||+.. .+ .|.. ..+. ...+|+++.++..+..+
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDH 253 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHH
Confidence 34455544 5555 4699999998 9999999999854 44 2311 1111 24589999888877766
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.28 E-value=0.02 Score=59.51 Aligned_cols=43 Identities=12% Similarity=0.170 Sum_probs=34.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhh---HHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMET---AINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t---a~~ia~~~gi~ 750 (928)
+.++-|++.++|+.|+++|+++.++||+.... +......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35678999999999999999999999998543 44444566764
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.0092 Score=58.13 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=34.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC---------------cHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGD---------------KMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD---------------~~~ta~~ia~~~gi~ 750 (928)
++.|++.++|+.|+++|++++++|+. ....+..+.+.+|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999997 455566677777763
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.18 E-value=0.023 Score=60.55 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=28.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
++++.+++.++++.|+++|+++.++||+....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 56678999999999999999999999998553
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.45 E-value=0.078 Score=55.08 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=33.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
-++.|++.++++.|+++|+++.++|.-+...+..+.+.+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 468899999999999999999999999887776665543
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=93.98 E-value=0.19 Score=48.04 Aligned_cols=17 Identities=24% Similarity=0.212 Sum_probs=14.5
Q ss_pred ecCCccHHHHHHHHHHc
Q 002392 542 EAESPDEAAFVIAAREV 558 (928)
Q Consensus 542 ~~~sp~e~al~~~a~~~ 558 (928)
.+.||...|++++|+..
T Consensus 35 ~SeHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 35 SSEHPLGVAVTKYCKEE 51 (165)
T ss_dssp TSCSTTHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHh
Confidence 35799999999999765
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.94 E-value=0.13 Score=52.73 Aligned_cols=40 Identities=20% Similarity=0.110 Sum_probs=32.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.++.|++.+.++.|++.|+++.++|+... +..+...+|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 35789999999999999999999998653 45556777774
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=92.80 E-value=1.6 Score=44.80 Aligned_cols=43 Identities=23% Similarity=0.215 Sum_probs=35.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHH---cCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA---CSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~---~gi~ 750 (928)
.+.+-+++.++|++++++|++++++||+...+...+++. +|+.
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 344448999999999999999999999998777777665 4663
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=92.62 E-value=0.084 Score=48.97 Aligned_cols=40 Identities=18% Similarity=0.062 Sum_probs=34.1
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCc---HhhHHHHHHHcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDK---METAINIGYACSLL 750 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~---~~ta~~ia~~~gi~ 750 (928)
+-+++.++|++|+++|++++++|||+ ...+...+.+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45799999999999999999999998 55667777788874
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.56 E-value=0.13 Score=53.31 Aligned_cols=43 Identities=5% Similarity=0.132 Sum_probs=34.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHH----cCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA----CSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~----~gi~ 750 (928)
.++.-+++.++++.+++.|+++.++||+...+...++.. +|+.
T Consensus 19 ~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 19 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 344447888999999999999999999998887776665 7774
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=92.14 E-value=0.091 Score=52.65 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=25.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhh
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~t 739 (928)
+.+++.++|+.|+++|+++.++|+.....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999997543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=83.98 E-value=0.89 Score=50.57 Aligned_cols=26 Identities=27% Similarity=0.474 Sum_probs=24.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDK 736 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~ 736 (928)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=81.96 E-value=3 Score=39.89 Aligned_cols=46 Identities=7% Similarity=0.039 Sum_probs=31.3
Q ss_pred CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhh
Q 002392 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 860 ~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
..+++|||+.+|+. ++||-.|++...... ...+++++.++..|..+
T Consensus 129 ~~~l~ieDs~~~i~--~aaG~~i~~~~~~~~--~~~~~~~i~~~~el~~~ 174 (180)
T 3bwv_A 129 LADYLIDDNPKQLE--IFEGKSIMFTASHNV--YEHRFERVSGWRDVKNY 174 (180)
T ss_dssp CCSEEEESCHHHHH--HCSSEEEEECCGGGT--TCCSSEEECSHHHHHHH
T ss_pred cccEEecCCcchHH--HhCCCeEEeCCCccc--CCCCceecCCHHHHHHH
Confidence 34799999999985 678866676432211 14578888887776665
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=81.84 E-value=1.3 Score=45.36 Aligned_cols=35 Identities=6% Similarity=0.066 Sum_probs=28.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
-++.|++.++++. |+++.++|.-+...+..+.+.+
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence 3567888888877 9999999999988777776655
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=81.62 E-value=0.49 Score=54.26 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=24.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGD 735 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD 735 (928)
++.+++.++|+.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999995
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 928 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-30 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 4e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 8e-15 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-06 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 7e-05 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 2e-04 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 3e-04 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 9e-04 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.002 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 118 bits (297), Expect = 1e-30
Identities = 41/258 (15%), Positives = 80/258 (31%), Gaps = 39/258 (15%)
Query: 465 ERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAI 524
+ F +D D LN + + E + N + + D + + + A+
Sbjct: 4 CKMFIIDKVDGDFCSLNEFSITG----STYAPEGEVLKNDKPIRSGQFDGLVELATICAL 59
Query: 525 CHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVN 584
C+ + D NE G E A ++ + ++S E +
Sbjct: 60 CNDSSLDFNETKGVYEK-VGEATETALTTLVEKMNVFN--TEVRNLSKVERANACNSVIR 116
Query: 585 RVYELLHVLEFTSSRKRMSVMVRNPENQ-----LLLLCKGADSVMFERLSKHG------- 632
++ + LEF+ RK MSV ++ + KGA + +R +
Sbjct: 117 QLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVP 176
Query: 633 --QQFEAETRRHINRYAEA--GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688
+ + I + LR L +A R+ + +
Sbjct: 177 MTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDD---------------- 220
Query: 689 ASAAEKIERDLILLGATA 706
+S + E DL +G
Sbjct: 221 SSRFMEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 88.0 bits (217), Expect = 4e-20
Identities = 29/214 (13%), Positives = 59/214 (27%), Gaps = 46/214 (21%)
Query: 509 EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAE--SPDEAAFVIAAREVGFQFFGSS 566
+ S R+ +C+ A+ +E +S E+A +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 567 QTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN--QLLLLCKGADSVM 624
+K+ + + F S+ K + +N +L+ KGA +
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 625 FERLS---------KHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675
+R S ++ + + G R L L ++ K
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF--- 186
Query: 676 AKTSVTSDREALVASAAEKIERDLILLGATAVED 709
D + L L +G ++ D
Sbjct: 187 -------DTDEL-----NFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 74.8 bits (183), Expect = 8e-15
Identities = 36/349 (10%), Positives = 79/349 (22%), Gaps = 86/349 (24%)
Query: 570 ISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLS 629
+ E + Q ++ L + + + N L + A + + +
Sbjct: 105 MYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDA 164
Query: 630 KHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVA 689
+ + A+ + + + + E +I F + +
Sbjct: 165 T-----LFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF----------KTGYIY 209
Query: 690 SAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749
D V ++ L AG ++ + TG +
Sbjct: 210 QEIILRPVD---------------EVKVLLNDLKGAGFELGIATGRPYTETVVP------ 248
Query: 750 LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGL 809
E L E + V + K
Sbjct: 249 ----------------FENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP------- 285
Query: 810 VIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869
+ A++ + + + +GD
Sbjct: 286 --------------------NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL 325
Query: 870 NDVGMLQEAD---IGV--GISGVEGMQAVMSS--DYAIAQFRFLERLLL 911
D+ Q+ IG G+ G + + + DY I L +L
Sbjct: 326 ADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 52.9 bits (126), Expect = 1e-08
Identities = 37/208 (17%), Positives = 61/208 (29%), Gaps = 57/208 (27%)
Query: 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQI 757
D T D +K V I AGI+V ++TGD TAI I +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF------- 60
Query: 758 VITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 817
E++ G+ D
Sbjct: 61 -------------------------------------------GENEEVADRAYTGREFD 77
Query: 818 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQE 877
+ + + R P K+ + ++ + T GDG ND L++
Sbjct: 78 DLPLAEQREAC------RRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKK 131
Query: 878 ADIGVGISGVEGMQAVMSSDYAIAQFRF 905
A+IG+ + A +S+ +A F
Sbjct: 132 AEIGIAMGSGT-AVAKTASEMVLADDNF 158
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.3 bits (111), Expect = 3e-06
Identities = 23/181 (12%), Positives = 54/181 (29%), Gaps = 12/181 (6%)
Query: 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDME 767
+ + E I + GI + ++TG+ ++ A + + +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 768 ALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 827
D+E I + R + + GLVI ++++ +++
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDR------RAGLVIMRETINVETVREIINE 130
Query: 828 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTL------AIGDGANDVGMLQEADIG 881
+ S + + K + + +GDG ND+ +
Sbjct: 131 LNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK 190
Query: 882 V 882
V
Sbjct: 191 V 191
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 3e-06
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 2/96 (2%)
Query: 813 GKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTG-KTTLAIGDGAND 871
+L+ F S + ++ L + K + IGDGA D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 872 VGMLQEADIGVGISGVEGMQAVM-SSDYAIAQFRFL 906
+ AD +G G Q V ++ + I F L
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 41.6 bits (97), Expect = 7e-05
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747
D D L++ + +L + GIKV ++TGD +A I
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 58
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 18/208 (8%), Positives = 55/208 (26%), Gaps = 30/208 (14%)
Query: 705 TAVEDKLQKGVPECIDKLAQAGIKVWVLTG-----------DKMETAINIGYACSLLRQE 753
T + I++L G ++ + + I S +
Sbjct: 12 TLIPGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIP 71
Query: 754 MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDG 813
+ ++ + K+ E + G+ ++ + ++ +
Sbjct: 72 KGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPP 131
Query: 814 KSLDFALDKKLEKMFLDL---------------AIDCASVICCRSSPKQKALVTRLVKGT 858
+ + A++++ + + + + + L+
Sbjct: 132 ELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFY 191
Query: 859 GKT----TLAIGDGANDVGMLQEADIGV 882
+ + A+GD ND M + D
Sbjct: 192 KRLGQIESYAVGDSYNDFPMFEVVDKVF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.6 bits (94), Expect = 3e-04
Identities = 31/171 (18%), Positives = 46/171 (26%), Gaps = 15/171 (8%)
Query: 715 VPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG 773
VPE A+ GI T + Y MKQ + LD ++ + Q
Sbjct: 14 VPEIWIAFAEKTGIDALKATTRDI-----PDYDVL-----MKQRLRILDEHGLKLGDIQE 63
Query: 774 DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833
+ + + + + TF L L++
Sbjct: 64 VIATLK---PLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDD 119
Query: 834 DCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI 884
V K K +A GD ND ML EA G+
Sbjct: 120 SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF 170
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 39.7 bits (91), Expect = 9e-04
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 862 TLAIGDGANDVGMLQEADIGVGISG 886
TL +GDG ND +L+ D V + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 38.8 bits (89), Expect = 0.002
Identities = 30/180 (16%), Positives = 63/180 (35%), Gaps = 12/180 (6%)
Query: 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL---LRQEMKQIVITLDSP 764
+ + E I + G+ V +L+G+ + + + + E I+ D
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 765 DMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL 824
+ +G + LE ++K R + + + + + + G ID + +D+ +
Sbjct: 78 IKKFFSNEGTNK-----FLEEMSK--RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAE 130
Query: 825 EKMFLDLAIDCASVICCRSSPKQKALVTRLVKG--TGKTTLAIGDGANDVGMLQEADIGV 882
+ F+ + + R K A+ L IGD ND+ M Q
Sbjct: 131 SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKA 190
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 928 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.91 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.87 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.85 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.81 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.3 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.19 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.13 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.03 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.03 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.01 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.96 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.92 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.91 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.88 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.88 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.83 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.83 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.73 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.58 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.57 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.52 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.48 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.34 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.0 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.72 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.49 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.47 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.35 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.09 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.04 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.92 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.9 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.89 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.75 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.41 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.39 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.21 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.18 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.03 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.93 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.87 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.76 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.1 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.06 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.05 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.97 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.9 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.98 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 93.67 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 91.94 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 91.78 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 90.9 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 87.06 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 85.15 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 80.71 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=4.4e-27 Score=227.15 Aligned_cols=148 Identities=24% Similarity=0.325 Sum_probs=119.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
||+|++++++|+.|+++||+|||+|||+..||.++|+++||+.++..+.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------- 67 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------- 67 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-------------------------------
Confidence 9999999999999999999999999999999999999999987653210
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG 868 (928)
...++|..+......++.+.+.+ ..+|+|++|+||..+++.+++.|+.|+|+|||
T Consensus 68 -------------------~~~~~~~~~~~~~~~~~~~~~~~------~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG 122 (168)
T d1wpga2 68 -------------------DRAYTGREFDDLPLAEQREACRR------ACCFARVEPSHKSKIVEYLQSYDEITAMTGDG 122 (168)
T ss_dssp -------------------TTEEEHHHHHHSCHHHHHHHHHH------CCEEESCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred -------------------cccccccccchhhHHHHhhhhhh------hhhhhccchhHHHHHHHHHHhcccceeEEecC
Confidence 00334444444333344443333 24899999999999999999999999999999
Q ss_pred hhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhhhhhhc
Q 002392 869 ANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHG 914 (928)
Q Consensus 869 ~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~lll~~G 914 (928)
.||++||++|||||+|+. ....|+++||+++++ |..+.++ +.||
T Consensus 123 ~nD~~AL~~AdvGIa~~~-gt~~a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 123 VNDAPALKKAEIGIAMGS-GTAVAKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp GGGHHHHHHSSEEEEETT-SCHHHHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred CCCHHHHHhCCEEEEecc-ccHHHHHhCCEEEccCCHHHHHHH-HHcC
Confidence 999999999999999953 223389999999997 6668887 7766
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.91 E-value=1.4e-25 Score=227.66 Aligned_cols=171 Identities=15% Similarity=0.155 Sum_probs=124.9
Q ss_pred chhHHHHHHHHHhhhcccccCCCCCCCce--EeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEE
Q 002392 511 HSDVIQKFFRVLAICHTAIPDVNEETGEI--SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 588 (928)
Q Consensus 511 ~~~~~~~~~~~l~lc~~~~~~~~~~~~~~--~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (928)
.++.+..++.++++||++....+...... ....++|.|.||+.+|.+.|+.... .+..|+
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~ 91 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNP 91 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSC
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCc
Confidence 34567789999999999977544321111 1124799999999999988765322 235678
Q ss_pred EeEeecccCCcceeEEEEEcC--CCcEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHHHhcCCeeeEEE
Q 002392 589 LLHVLEFTSSRKRMSVMVRNP--ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIA 657 (928)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A 657 (928)
++..+||+|+||||+++++.+ ++.+++|+||||+.|+++|+.. ++..++.+.+.++.|+.+|+|||++|
T Consensus 92 ~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 171 (214)
T d1q3ia_ 92 KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFC 171 (214)
T ss_dssp EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 899999999999999999985 4678999999999999999852 34567889999999999999999999
Q ss_pred EEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCCC
Q 002392 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKG 714 (928)
Q Consensus 658 ~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~ 714 (928)
||.++.+++..|.. .+.+ ..+.+|+||+|+|++||+||+|+.
T Consensus 172 ~k~l~~~~~~~~~~----------~~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 172 QLNLPSGKFPRGFK----------FDTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEECTTTSCTTCC----------CCTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEecCccccccccc----------cChh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99999877654421 1111 114567899999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=1.7e-23 Score=193.32 Aligned_cols=123 Identities=25% Similarity=0.341 Sum_probs=102.4
Q ss_pred CceEEEEeeecccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhH
Q 002392 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (928)
Q Consensus 698 ~l~llG~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (928)
|.+..+.++++|++|++++++|+.|+++||++||+|||+..+|..+|++|||-
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--------------------------- 61 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--------------------------- 61 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh---------------------------
Confidence 55566789999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc
Q 002392 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~ 857 (928)
.++++++|++|..+++.++.
T Consensus 62 ------------------------------------------------------------~v~~~~~p~~k~~~v~~~q~ 81 (135)
T d2b8ea1 62 ------------------------------------------------------------LVIAEVLPHQKSEEVKKLQA 81 (135)
T ss_dssp ------------------------------------------------------------EEECSCCHHHHHHHHHHHTT
T ss_pred ------------------------------------------------------------hhccccchhHHHHHHHHHHc
Confidence 27899999999999999965
Q ss_pred CCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc--cccchhh
Q 002392 858 TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERL 909 (928)
Q Consensus 858 ~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~--f~~l~~l 909 (928)
+..|+|+|||.||++||++|||||+|++... .++++||+++++ |+.|..+
T Consensus 82 -~~~v~~vGDg~nD~~aL~~Advgia~~~~~~-~~~~aADivl~~~~l~~i~~a 133 (135)
T d2b8ea1 82 -KEVVAFVGDGINDAPALAQADLGIAVGSGSD-VAVESGDIVLIRDDLRDVVAA 133 (135)
T ss_dssp -TSCEEEEECSSSSHHHHHHSSEEEEECCC---------SEEESSCCTHHHHHH
T ss_pred -CCEEEEEeCCCCcHHHHHhCCeeeecCccCH-HHHHhCCEEEECCCHHHHHHH
Confidence 4689999999999999999999999965432 289999999997 4445444
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.87 E-value=3.1e-27 Score=261.95 Aligned_cols=286 Identities=14% Similarity=0.064 Sum_probs=185.8
Q ss_pred HHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeeccc
Q 002392 517 KFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFT 596 (928)
Q Consensus 517 ~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~ 596 (928)
++..+.++||.+..... .+.|++.+++..++..+..+.. ....|.....+||+
T Consensus 79 dl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~i~f~ 131 (380)
T d1qyia_ 79 DMLFIVFSIHLIDILKK---------LSHDEIEAFMYQDEPVELKLQN------------------ISTNLADCFNLNEQ 131 (380)
T ss_dssp HHHHHHHHHHHHHHHTT---------SCHHHHHHHHHCSSCHHHHHTT------------------SGGGCSSCCCCCTT
T ss_pred HHHHHHHHHHHHHHHhh---------cCCCcHHHHHHHHhhccchHHH------------------HHHhccccccCCcc
Confidence 45666777876543221 2567788877654432221111 12344556678999
Q ss_pred CCcceeEEEEEcCCCcEEEEEecCchhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHH
Q 002392 597 SSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKA 676 (928)
Q Consensus 597 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a 676 (928)
+.+|+|+++....++.+.++.+|+++.+.. .......+...+..++.+|+|++++|++..+..+
T Consensus 132 ~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~----------- 195 (380)
T d1qyia_ 132 LPLQFLDNVKVGKNNIYAALEEFATTELHV-----SDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE----------- 195 (380)
T ss_dssp TTHHHHTTCCSSHHHHHHHHHHHHHHHTTC-----SCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred hHHHHHhhhcccccchhHhhhhccHhhcCC-----cHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc-----------
Confidence 999999988766555555566677655421 1122334556778899999999999876543321
Q ss_pred hhhccccHHHHHHHHHHHhhcCceEEEEeeecccCCC--ChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCc
Q 002392 677 KTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK--GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (928)
Q Consensus 677 ~~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~--~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~ 754 (928)
.....+....|+++.+++++| +++++|+.|+++||+++|+|||+..+|..+++++||...-.
T Consensus 196 ----------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~ 259 (380)
T d1qyia_ 196 ----------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE 259 (380)
T ss_dssp ----------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC
T ss_pred ----------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCC
Confidence 112245566799999999776 99999999999999999999999999999999999964211
Q ss_pred eEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhcc
Q 002392 755 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID 834 (928)
Q Consensus 755 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~ 834 (928)
....+.+.. +............ .. +.....+..
T Consensus 260 ~~~i~~~~d----------------------~~~~~~~~~~~~~--~~-------------------KP~p~~~~~---- 292 (380)
T d1qyia_ 260 ADFIATASD----------------------VLEAENMYPQARP--LG-------------------KPNPFSYIA---- 292 (380)
T ss_dssp GGGEECHHH----------------------HHHHHHHSTTSCC--CC-------------------TTSTHHHHH----
T ss_pred cceEEecch----------------------hhhhhhhcccccc--cc-------------------CCChHHHHH----
Confidence 100110000 0000000000000 00 000011111
Q ss_pred CCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCC---eeEEec--CCcchh--hhhcCcEeecccccch
Q 002392 835 CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEAD---IGVGIS--GVEGMQ--AVMSSDYAIAQFRFLE 907 (928)
Q Consensus 835 ~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~---vGIam~--g~e~~~--ak~aAD~vi~~f~~l~ 907 (928)
...++|.+|.+|..+++.++..+..|+|+|||.||++|++.|| |||+|+ |.+..+ ....||+++.++..|.
T Consensus 293 --~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~ 370 (380)
T d1qyia_ 293 --ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELR 370 (380)
T ss_dssp --HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHH
T ss_pred --HHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHH
Confidence 1256789999999999999888999999999999999999999 899874 333310 2237999999999988
Q ss_pred hhh
Q 002392 908 RLL 910 (928)
Q Consensus 908 ~ll 910 (928)
++|
T Consensus 371 ~il 373 (380)
T d1qyia_ 371 GVL 373 (380)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.85 E-value=6.1e-22 Score=204.37 Aligned_cols=178 Identities=20% Similarity=0.239 Sum_probs=127.3
Q ss_pred chhHHHHHHHHHhhhcccccCCCCCCCceEeecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEe
Q 002392 511 HSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELL 590 (928)
Q Consensus 511 ~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 590 (928)
..+.+..++.+++|||++....++..+.+ ...++|+|.||+.+|.+.|+.........- ...........+..|+++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSK--VERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCH--HHHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccch--hhhhccchhhhhhhCeEE
Confidence 34567889999999999887655444444 345799999999999999986543211000 000000001123579999
Q ss_pred EeecccCCcceeEEEEEcCCC-----cEEEEEecCchhhHHHhccc---------chhhHHHHHHHHHHH--HhcCCeee
Q 002392 591 HVLEFTSSRKRMSVMVRNPEN-----QLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRY--AEAGLRTL 654 (928)
Q Consensus 591 ~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--~~~Glr~l 654 (928)
..+||+|+||||||+++.+++ .+++|+||||+.|+++|+.. +.+.++.+.+.++.| +.+|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998764 36899999999999999752 345667777777776 67999999
Q ss_pred EEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEeee
Q 002392 655 VIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAV 707 (928)
Q Consensus 655 ~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~llG~~~i 707 (928)
++|||+++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~-----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVL-----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCT-----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCcccccccc-----------cch-----hhHHHhcCCCEEEEEECC
Confidence 9999999865432211 011 113678999999999986
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.81 E-value=9.8e-21 Score=168.39 Aligned_cols=106 Identities=23% Similarity=0.295 Sum_probs=82.8
Q ss_pred eeEEEccCCeE--EEEeccccccCcEEEecCCcccCceEEEEeeeCCCceEEEEeccCCCCccceeeccchhhccCCChh
Q 002392 139 KVKVYGQDHTF--VETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEE 216 (928)
Q Consensus 139 ~~~v~r~~g~~--~~i~~~~L~vGDII~l~~ge~vPaD~ilL~ss~~~G~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~ 216 (928)
+++|+| +|++ ++|++++|+|||||.|++|++|||||+||.... +.++||||+|||||.|+.|.+.+....
T Consensus 2 ~~kV~R-~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~~----- 73 (115)
T d1wpga1 2 MGKVYR-ADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPDP----- 73 (115)
T ss_dssp EEEEEB-SSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCCT-----
T ss_pred ceEEEE-CCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeeccccccc-----
Confidence 689999 8764 789999999999999999999999999997554 558999999999999999986543210
Q ss_pred hhccceEEEEeecCCCCceeEEEEEEECCeEeecCcccccccCceeecCCeEEEEEEEecCcccee
Q 002392 217 SFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM 282 (928)
Q Consensus 217 ~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~~~rgs~l~~t~~~~gvVv~tG~~Tki~ 282 (928)
.....+..|++|.||.+. +|+++++|++||.+|.+.
T Consensus 74 -----------------------------~~~~~~~~n~lf~GT~V~-~G~~~~~V~~tG~~T~~G 109 (115)
T d1wpga1 74 -----------------------------RAVNQDKKNMLFSGTNIA-AGKALGIVATTGVSTEIG 109 (115)
T ss_dssp -----------------------------TCCGGGCTTEECTTCEEE-ECEEEEEEEECGGGSHHH
T ss_pred -----------------------------ccccccccceEEeccEEE-eeeEEEEEEEEccccHHH
Confidence 011123345566666655 355999999999999654
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.30 E-value=9.7e-13 Score=148.67 Aligned_cols=72 Identities=22% Similarity=0.103 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHhccccceeehhHHHHHHHHHHHhhcccccccccCCCCceeecccchhhccceeEEEecCC--Cccccce
Q 002392 358 FLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT--GTLTCNS 435 (928)
Q Consensus 358 ~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~~~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKT--GTLT~n~ 435 (928)
+..|..++.+.+.++|.+||++++++.++++.+| ++++++||+..++|+||+..+.|+||| +|||.|.
T Consensus 178 ~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~ 247 (472)
T d1wpga4 178 IYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNV 247 (472)
T ss_dssp GGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhH
Confidence 3467788999999999999999999999999999 899999999999999999999999998 9999998
Q ss_pred eEEE
Q 002392 436 MEFV 439 (928)
Q Consensus 436 m~~~ 439 (928)
+.+.
T Consensus 248 ~~v~ 251 (472)
T d1wpga4 248 GEVV 251 (472)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.19 E-value=4.3e-11 Score=124.89 Aligned_cols=192 Identities=14% Similarity=0.104 Sum_probs=106.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.+.+.++|++|+++||+++++|||+...+..+.+++++..+...++..+|.......-.+......+.......+...
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~ 100 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHH
Confidence 47788999999999999999999999999999999999987766555555544211000000000000000000000000
Q ss_pred HHhh----------------------------hhhccc--------cccccceEEEEEccchhhHHhHHHHHHHHHHhhc
Q 002392 790 IREG----------------------------ISQVNS--------AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833 (928)
Q Consensus 790 ~~~~----------------------------~~~~~~--------~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~ 833 (928)
.... ...... ...........++......-....+...+.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (271)
T d1rkqa_ 101 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180 (271)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcceE
Confidence 0000 000000 0000112223333322221111222222222110
Q ss_pred c-CCceEEEeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 834 D-CASVICCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 834 ~-~~~~i~~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
. .....+....|. .|+..++.+ +..+ ..+++||||.||++||+.|++||+|+++... ++..||++...
T Consensus 181 ~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~-lk~~a~~i~~~ 255 (271)
T d1rkqa_ 181 VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPS-VKEVANFVTKS 255 (271)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCSEECCC
T ss_pred EEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHH-HHHhCCEEcCC
Confidence 0 000012334444 799999988 4433 4599999999999999999999999776543 89999999874
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.13 E-value=5.1e-11 Score=120.76 Aligned_cols=186 Identities=13% Similarity=0.125 Sum_probs=98.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+.+.++|++|+++|++++++|||+...+..++..+++..+ ++.-+|........................+...
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~---~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP---VVAEDGGAISYKKKRIFLASMDEEWILWNEIRKR 95 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC---EEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc---cccccceeeeccccccccccccHHHHHHHHHHHh
Confidence 4778899999999999999999999999999999998887432 2222221100000000000000000111111111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhh--ccCCceEEEeeCcccHHHHHHHH-hcCC---CEEE
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA--IDCASVICCRSSPKQKALVTRLV-KGTG---KTTL 863 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~--~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vl 863 (928)
........ ........+.+.........-.++.+.+.... ......+-.......|...++.+ +..| ..|+
T Consensus 96 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~ 172 (230)
T d1wr8a_ 96 FPNARTSY---TMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVA 172 (230)
T ss_dssp CTTCCBCT---TGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEE
T ss_pred ccccccee---ecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhhee
Confidence 11000000 00111112222222221111111111111000 00011122233445899988887 4443 5699
Q ss_pred EEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 864 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 864 aiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
+||||.||++||+.||+||+|+++.. .++++||+|+..
T Consensus 173 ~iGD~~NDi~ml~~ag~~vav~na~~-~~k~~A~~v~~~ 210 (230)
T d1wr8a_ 173 HVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKK 210 (230)
T ss_dssp EEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSS
T ss_pred eeecCccHHHHHHHCCeEEEECCCCH-HHHHhCCEEECC
Confidence 99999999999999999999976654 389999999975
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.03 E-value=4.2e-10 Score=118.13 Aligned_cols=61 Identities=25% Similarity=0.297 Sum_probs=51.0
Q ss_pred EeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..++|. .|+..++.+ +..| ..|++||||.||++||+.|+.||||+|+.. +++..||++...
T Consensus 205 ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~-~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 205 FELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLT 271 (285)
T ss_dssp EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCC
T ss_pred EEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCH-HHHHhCCEEcCC
Confidence 345565 799999999 6655 469999999999999999999999977653 389999999874
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=1.1e-10 Score=121.75 Aligned_cols=61 Identities=23% Similarity=0.215 Sum_probs=51.0
Q ss_pred EeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..++|. .|+..++.+ +..| ..|++||||.||++||+.|+.||+|+++.. ++|..||+|+..
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~-~lk~~A~~v~~~ 248 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDD 248 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCC
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCH-HHHHhCCEEcCC
Confidence 455664 699999998 6555 359999999999999999999999977653 389999999885
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.01 E-value=5.2e-10 Score=113.09 Aligned_cols=179 Identities=15% Similarity=0.109 Sum_probs=98.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHH
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
+..+.+++.+++++|++.|++++++|||+...+..++...|+-. .++..+|...... .................
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~---~~~~~~~~~~~~~~~~~ 91 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDN---DGSIKKFFSNEGTNKFL 91 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECT---TSCEEESSCSHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeC---CccEEEecChHHHHHHH
Confidence 34577899999999999999999999999999999998888743 2222222210000 00000000000011111
Q ss_pred HHHHhhhhhccc--cccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceE-----EEeeC--cccHHHHHHHH-hc
Q 002392 788 KQIREGISQVNS--AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-----CCRSS--PKQKALVTRLV-KG 857 (928)
Q Consensus 788 ~~~~~~~~~~~~--~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i-----~~r~~--p~qK~~iv~~l-~~ 857 (928)
..+......... ............+...+..+. ..... ....+ +.... ...|...++.+ +.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~ 162 (225)
T d1l6ra_ 92 EEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVR-----KEAES----RGFVIFYSGYSWHLMNRGEDKAFAVNKLKEM 162 (225)
T ss_dssp HHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHH-----HHHHT----TTEEEEEETTEEEEEETTCSHHHHHHHHHHH
T ss_pred HHHHHhcCcceeecccceeeeeccccCHHHHHHHH-----HHHhh----cCcEEEECCcEEEecCCccchHHHHHHHhhh
Confidence 111111000000 000111122222222222221 11111 11111 22233 34899999887 55
Q ss_pred CC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 858 TG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 858 ~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
.| ..|++||||.||++|++.|++||||+++... +++.|||++..
T Consensus 163 ~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~-~k~~ad~v~~~ 209 (225)
T d1l6ra_ 163 YSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDN-IKAVSDFVSDY 209 (225)
T ss_dssp TTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHH-HHHHCSEECSC
T ss_pred hccchhheeeecCCcchHHHHHHCCeEEEECCCcHH-HHHhCCEEECC
Confidence 44 4599999999999999999999999766543 89999998775
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=8.2e-10 Score=110.87 Aligned_cols=131 Identities=21% Similarity=0.311 Sum_probs=92.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
+++|++.++|+.|++.|++++|+||.....+..+++.+|+-... ++.....
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~an~~~--------------------------- 132 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRLK--------------------------- 132 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECEE---------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eeeeeee---------------------------
Confidence 47899999999999999999999999999999999999985321 1110000
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc-CC-CEEEEEcC
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG-TG-KTTLAIGD 867 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~-~g-~~vlaiGD 867 (928)
...+|..... .. ......+..|..+++.++. .+ ..++|+||
T Consensus 133 -------------------~~~~G~~~g~----------------~~--~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGD 175 (217)
T d1nnla_ 133 -------------------FYFNGEYAGF----------------DE--TQPTAESGGKGKVIKLLKEKFHFKKIIMIGD 175 (217)
T ss_dssp -------------------ECTTSCEEEE----------------CT--TSGGGSTTHHHHHHHHHHHHHCCSCEEEEES
T ss_pred -------------------eeehhccccc----------------ee--eeeeeccchHHHHHHHHHhccCccccEEEEe
Confidence 0000000000 00 0001234569999988832 23 46999999
Q ss_pred ChhcHHHHHhCCeeEEecCC-cchhhhhcCcEeecccccc
Q 002392 868 GANDVGMLQEADIGVGISGV-EGMQAVMSSDYAIAQFRFL 906 (928)
Q Consensus 868 G~ND~~ml~~A~vGIam~g~-e~~~ak~aAD~vi~~f~~l 906 (928)
|.||++|++.||+|||+++. ...+.++.||++|.+|..|
T Consensus 176 s~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 176 GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred CHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 99999999999999999654 3345678899999988765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.92 E-value=1.4e-09 Score=104.38 Aligned_cols=112 Identities=19% Similarity=0.171 Sum_probs=86.0
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHHHHhhhhh
Q 002392 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (928)
Q Consensus 717 ~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (928)
.+|+.|+..|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 48999999999999999999999999999888731
Q ss_pred ccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEEEcCChhcH
Q 002392 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (928)
Q Consensus 797 ~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~ 872 (928)
+ ......|...++.+ ++.+ ..|+++||+.||+
T Consensus 74 ------------------------------------------~--~~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 74 ------------------------------------------F--FLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp ------------------------------------------E--EESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------c--ccccccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 1 11223565555554 3333 6799999999999
Q ss_pred HHHHhCCeeEEecCCcchhhhhcCcEeecc------cccchhhhh-hhchhhh
Q 002392 873 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLL-VHGHWCY 918 (928)
Q Consensus 873 ~ml~~A~vGIam~g~e~~~ak~aAD~vi~~------f~~l~~lll-~~Gr~~~ 918 (928)
+||+.|++|++++++... ++..||||+.. .+.+..+|+ .+|+|.+
T Consensus 110 ~~l~~~g~siap~nA~~~-vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 110 PAFAACGTSFAVADAPIY-VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp HHHHHSSEEEECTTSCHH-HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHhhCCeEEEcCCccHH-HHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 999999999999877554 99999999985 444555543 5777654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.91 E-value=2.5e-10 Score=119.65 Aligned_cols=56 Identities=18% Similarity=0.275 Sum_probs=47.2
Q ss_pred ccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
..|...++.+ +..+ ..|++||||.||++||+.||+||+|+++.. .+++.||+++..
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~-~~k~~a~~v~~~ 265 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPV 265 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSS
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCH-HHHHhCCEEECC
Confidence 3788888888 5444 579999999999999999999999977654 389999999863
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.88 E-value=1.6e-09 Score=112.48 Aligned_cols=62 Identities=23% Similarity=0.291 Sum_probs=51.0
Q ss_pred EeeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccc
Q 002392 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (928)
Q Consensus 841 ~r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f 903 (928)
..++|. .|+..++.+ +..| ..|+|||||.||++||+.||+||+|+++... +++.||+++...
T Consensus 182 ~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~-~k~~A~~i~~~~ 249 (267)
T d1nf2a_ 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK-VKEASDIVTLTN 249 (267)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH-HHHHCSEECCCT
T ss_pred eeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHH-HHHhCCEEcCCC
Confidence 345564 799999988 5544 4599999999999999999999999776543 999999999853
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.88 E-value=1.6e-08 Score=101.86 Aligned_cols=41 Identities=10% Similarity=0.092 Sum_probs=38.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+.+.++++|++|+++|++++++|||+...+..+.+++++-
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 47789999999999999999999999999999999999873
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.83 E-value=3.1e-09 Score=108.24 Aligned_cols=43 Identities=7% Similarity=0.006 Sum_probs=39.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.+...+.++++|++|+++|++++++|||+...+..+.+.+++.
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4556788999999999999999999999999999999999874
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.83 E-value=2.9e-09 Score=110.00 Aligned_cols=60 Identities=30% Similarity=0.477 Sum_probs=49.5
Q ss_pred eeCcc--cHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecc
Q 002392 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (928)
Q Consensus 842 r~~p~--qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~ 902 (928)
...|. .|+..++.+ ++.| ..+++||||.||++||+.|+.||+|+|+... +++.||+|...
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~-lk~~A~~vt~~ 244 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED-VKAAADYVTAP 244 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCC
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHH-HHHhCCEEeCC
Confidence 34443 799999888 5544 5699999999999999999999999876543 89999998775
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.73 E-value=3e-08 Score=97.72 Aligned_cols=130 Identities=19% Similarity=0.129 Sum_probs=87.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
+..++....++.+ ..+.+++++|+.............++..............
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4566777777665 5789999999998888888888888753221111111110
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
.........+..+...++.++.....|+|||||.
T Consensus 122 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~ 155 (206)
T d1rkua_ 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSY 155 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred ----------------------------------------------ccccccccchhhHHHHHHHhcccccceEEecCCc
Confidence 0012222334444555666666778999999999
Q ss_pred hcHHHHHhCCeeEEecCCcchhhhhcCcEeec-ccccchhhhhhh
Q 002392 870 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIA-QFRFLERLLLVH 913 (928)
Q Consensus 870 ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~-~f~~l~~lll~~ 913 (928)
||++||+.||+|||| |+...-.++++||+.. ++..|...|+.+
T Consensus 156 NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 156 NDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKA 199 (206)
T ss_dssp TTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHHH
T ss_pred cCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHHHH
Confidence 999999999999999 5544435678899765 577777764443
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.58 E-value=9.6e-08 Score=95.68 Aligned_cols=66 Identities=18% Similarity=0.285 Sum_probs=48.1
Q ss_pred EEeeCcc--cHHHHHHHHhcCCCEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeecccccchhh
Q 002392 840 CCRSSPK--QKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 840 ~~r~~p~--qK~~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
+....|. .|+..++.+... ..+++|||+.||++||+.|+.|++|+..+ ++.+|+|.+.+-..+..+
T Consensus 150 ~idi~p~g~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ev~~~ 217 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYIEMRKI 217 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHHHHHHH
Confidence 3445554 799999999433 46899999999999999998777774332 245899999875554444
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.57 E-value=9.4e-08 Score=97.24 Aligned_cols=56 Identities=21% Similarity=0.256 Sum_probs=45.6
Q ss_pred CcccHHHHHHHH-hcCC---CEEEEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEee
Q 002392 844 SPKQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI 900 (928)
Q Consensus 844 ~p~qK~~iv~~l-~~~g---~~vlaiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi 900 (928)
....|+..++.+ +..| ..|+++|||.||++||+.||.||+|++++.. +++.||.+.
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~~~ 218 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQWG 218 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHHHC
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhccc
Confidence 345799999998 5555 4599999999999999999999999876654 788777543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.52 E-value=1.4e-07 Score=92.92 Aligned_cols=121 Identities=20% Similarity=0.183 Sum_probs=80.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
.++.+++.+.++.++..|..+.++||.....+....+..++...-..........
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 128 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------------------- 128 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc-------------------------
Confidence 4688999999999999999999999999998888888877643211111100000
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEe--eCcccHHHHHHHH-h---cCCCEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR--SSPKQKALVTRLV-K---GTGKTT 862 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r--~~p~qK~~iv~~l-~---~~g~~v 862 (928)
.. ..... ..+..|...+..+ + .....+
T Consensus 129 ------------------~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (210)
T d1j97a_ 129 ------------------LT-----------------------------GDVEGEVLKENAKGEILEKIAKIEGINLEDT 161 (210)
T ss_dssp ------------------EE-----------------------------EEEECSSCSTTHHHHHHHHHHHHHTCCGGGE
T ss_pred ------------------cc-----------------------------ccccccccccccccchhhhHHHHhcccccce
Confidence 00 00001 1112233333333 2 223469
Q ss_pred EEEcCChhcHHHHHhCCeeEEecCCcchhhhhcCcEeeccc
Q 002392 863 LAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (928)
Q Consensus 863 laiGDG~ND~~ml~~A~vGIam~g~e~~~ak~aAD~vi~~f 903 (928)
+|||||.||++|++.||+||||++.+. .++.||+++...
T Consensus 162 i~iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 162 VAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKR 200 (210)
T ss_dssp EEEESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSS
T ss_pred EEecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCC
Confidence 999999999999999999999944343 788999999743
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.48 E-value=1.2e-07 Score=95.15 Aligned_cols=136 Identities=14% Similarity=0.099 Sum_probs=91.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCce-EEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK-QIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
+++|++.+.|+.|++.|+++.++||-....+..+.+.+|+...-.. ...+.++..
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------------------------ 130 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------------------------ 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------------------------
Confidence 4789999999999999999999999999999999998887532100 011111100
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCC
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG 868 (928)
...+.. ..........|..|..+++.++..+..|++|||+
T Consensus 131 ---------------------~~~~~~-------------------~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs 170 (226)
T d2feaa1 131 ---------------------HIDWPH-------------------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDS 170 (226)
T ss_dssp ---------------------EEECTT-------------------CCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECC
T ss_pred ---------------------eecccc-------------------ccccccccCCHHHHHHHHHHhcCCCceEEEEeCc
Confidence 000000 0001233567888999999997778899999999
Q ss_pred hhcHHHHHhCCeeEEecCCcchhhhhcCc-Eeecccccchhh
Q 002392 869 ANDVGMLQEADIGVGISGVEGMQAVMSSD-YAIAQFRFLERL 909 (928)
Q Consensus 869 ~ND~~ml~~A~vGIam~g~e~~~ak~aAD-~vi~~f~~l~~l 909 (928)
.||++|++.||+++++.+....-.....+ ..+.+|+.+...
T Consensus 171 ~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 171 VTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp GGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred hhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHH
Confidence 99999999999999985421110122233 344566666555
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.34 E-value=1.6e-07 Score=94.72 Aligned_cols=54 Identities=13% Similarity=0.231 Sum_probs=45.5
Q ss_pred cHHHHHHHH-hcCCCEEEEEcC----ChhcHHHHHhCC-eeEEecCCcchhhhhcCcEeec
Q 002392 847 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDYAIA 901 (928)
Q Consensus 847 qK~~iv~~l-~~~g~~vlaiGD----G~ND~~ml~~A~-vGIam~g~e~~~ak~aAD~vi~ 901 (928)
.|+..++.| +.....|++||| |.||++||++|+ .|+||+|++.. +|..+|++++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~~ 244 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFFP 244 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHCT
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcCC
Confidence 799999999 555678999999 569999999998 69999887654 8888888764
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.00 E-value=1.6e-06 Score=87.23 Aligned_cols=50 Identities=24% Similarity=0.352 Sum_probs=38.0
Q ss_pred cHHHHHHHH-hcCCCEEEEEcC----ChhcHHHHHhCC-eeEEecCCcchhhhhcCcE
Q 002392 847 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDY 898 (928)
Q Consensus 847 qK~~iv~~l-~~~g~~vlaiGD----G~ND~~ml~~A~-vGIam~g~e~~~ak~aAD~ 898 (928)
+|+..++.| +.....|++||| |.||++||++|+ .|+++++.+. .++.++.
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~--~~~~~~~ 240 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED--TRRICEL 240 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH--HHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH--HHHHHHH
Confidence 799888888 445578999999 889999999998 6888877654 5665543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.72 E-value=4.4e-05 Score=75.27 Aligned_cols=124 Identities=19% Similarity=0.147 Sum_probs=84.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.++++++++.|++.|++++++||.....+..+.+.+||...-..++. ..
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~--~~--------------------------- 145 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLG--GQ--------------------------- 145 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEEC--TT---------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccc--cc---------------------------
Confidence 4689999999999999999999999999999999999998532211110 00
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
.. -.....|+--..+.+.++.....+++|||+.
T Consensus 146 -------------------------~~----------------------~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~ 178 (224)
T d2hsza1 146 -------------------------SL----------------------PEIKPHPAPFYYLCGKFGLYPKQILFVGDSQ 178 (224)
T ss_dssp -------------------------TS----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred -------------------------cc----------------------ccccccchhhHHHHHHhhhhhhccchhcCcH
Confidence 00 0001112222233333433456799999999
Q ss_pred hcHHHHHhCCe-eEEec---CCcchhhhhcCcEeecccccchhh
Q 002392 870 NDVGMLQEADI-GVGIS---GVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 870 ND~~ml~~A~v-GIam~---g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
+|+.+-+.||+ .|++. +.........+|+++.++..|.++
T Consensus 179 ~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 179 NDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp HHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 99999999998 55553 122221345699999999998877
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=3.5e-05 Score=69.78 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=75.0
Q ss_pred ecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCc
Q 002392 542 EAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGAD 621 (928)
Q Consensus 542 ~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 621 (928)
.++||..+|++++|++.+...... ..+.-...++|+...+...+.+ +|+ .+..|++
T Consensus 28 ~SeHPlakAIv~~Ak~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~g~~~---~g~--~v~~G~~ 83 (136)
T d2a29a1 28 ADETPEGRSIVILAKQRFNLRERD-------------------VQSLHATFVPFTAQSRMSGINI---DNR--MIRKGSV 83 (136)
T ss_dssp TCCSHHHHHHHHHHHHHHCCCCCC-------------------TTTTTCEEEEEETTTTEEEEEE---TTE--EEEEECH
T ss_pred CCCchHHHHHHHHHHHhcCCCccc-------------------cccccccccccccccceEEEEE---CCE--EEEecHH
Confidence 357999999999999865432110 0011112345555554433333 333 4556999
Q ss_pred hhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEEEEccCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceE
Q 002392 622 SVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701 (928)
Q Consensus 622 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~l 701 (928)
..|..++...+..+...+.+.++.++.+|.+++.+| .|-.+
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va---------------------------------------~d~~~ 124 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRV 124 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEE---------------------------------------ETTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEE---------------------------------------ECCEE
Confidence 888777765554566788889999999999999999 57799
Q ss_pred EEEeeecccCC
Q 002392 702 LGATAVEDKLQ 712 (928)
Q Consensus 702 lG~~~ieD~lr 712 (928)
+|++++.|++|
T Consensus 125 ~G~i~l~D~iK 135 (136)
T d2a29a1 125 LGVIALKDIVK 135 (136)
T ss_dssp EEEEEEEESSC
T ss_pred EEEEEEEeecC
Confidence 99999999986
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.47 E-value=0.00015 Score=71.05 Aligned_cols=122 Identities=13% Similarity=0.084 Sum_probs=80.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.++|+.|+++|+++.++||.+...+..+.+.+|+..--..++.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~------------------------------- 136 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALAS------------------------------- 136 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccccccc-------------------------------
Confidence 3469999999999999999999999999999999999999432111111
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
++.. -.+...|+-=..+++.+.-....+++|||+.
T Consensus 137 -----------------------~~~~----------------------~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~ 171 (218)
T d1te2a_ 137 -----------------------AEKL----------------------PYSKPHPQVYLDCAAKLGVDPLTCVALEDSV 171 (218)
T ss_dssp -----------------------CTTS----------------------SCCTTSTHHHHHHHHHHTSCGGGEEEEESSH
T ss_pred -----------------------cccc----------------------ccchhhHHHHHHHHHHcCCCchhcEEEeeCH
Confidence 1000 0001111111223333322345799999999
Q ss_pred hcHHHHHhCCeeE-EecCCc--chhhhhcCcEeecccccch
Q 002392 870 NDVGMLQEADIGV-GISGVE--GMQAVMSSDYAIAQFRFLE 907 (928)
Q Consensus 870 ND~~ml~~A~vGI-am~g~e--~~~ak~aAD~vi~~f~~l~ 907 (928)
+|+.|-+.||+.. ++.+.+ .......||++|.++..|.
T Consensus 172 ~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 172 NGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp HHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred HHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence 9999999999854 553321 2213456899999988763
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.35 E-value=0.00011 Score=72.79 Aligned_cols=42 Identities=21% Similarity=0.203 Sum_probs=37.6
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 710 KLQKGVPECIDKLAQAG-IKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aG-Ikv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
++-||+.++++.|++.| +++.++||.....+..+.+..||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45689999999999987 8999999999999999999999853
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.09 E-value=0.00093 Score=64.67 Aligned_cols=118 Identities=16% Similarity=0.170 Sum_probs=81.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHH
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (928)
-++.+++.+.++.++..| ++.++|+.....+..+.+.+|+...-..
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~--------------------------------- 128 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDG--------------------------------- 128 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccc---------------------------------
Confidence 357899999999999775 8999999999999999999998532111
Q ss_pred HHHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHH-hcCC---CEEEE
Q 002392 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLA 864 (928)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l-~~~g---~~vla 864 (928)
++.+...+..|..+.... +..| ..+++
T Consensus 129 -------------------------------------------------v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~ 159 (210)
T d2ah5a1 129 -------------------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp -------------------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred -------------------------------------------------cccccccccccccccchhhhhhhccccccee
Confidence 122222333444444444 3333 56999
Q ss_pred EcCChhcHHHHHhCCe-eEEec-CC-cchhhh-hcCcEeecccccchhh
Q 002392 865 IGDGANDVGMLQEADI-GVGIS-GV-EGMQAV-MSSDYAIAQFRFLERL 909 (928)
Q Consensus 865 iGDG~ND~~ml~~A~v-GIam~-g~-e~~~ak-~aAD~vi~~f~~l~~l 909 (928)
|||+.+|+.|-+.||+ .|++. |. ...+.. ..+|+++.++..|...
T Consensus 160 VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~ 208 (210)
T d2ah5a1 160 IGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred ecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 9999999999999998 56663 32 222222 3489999887776554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.04 E-value=0.00087 Score=68.19 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=43.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEE
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIV 758 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~ 758 (928)
+||+|+++.++.|++.|+++.++||--...+..+++++|+..++..++.
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~s 183 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVS 183 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEe
Confidence 4899999999999999999999999998999999999998766544433
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.92 E-value=0.00035 Score=70.34 Aligned_cols=41 Identities=29% Similarity=0.282 Sum_probs=37.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+++.++++.|++.|+++.++||.+...+..+.+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 57899999999999999999999999999998888888874
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.90 E-value=0.0012 Score=62.55 Aligned_cols=60 Identities=17% Similarity=0.230 Sum_probs=42.1
Q ss_pred HHHHHHhcCCCEEEEEcCChhcHHHHHhCCee--EEe-cCCc-chhhhhcCcEeecccccchhh
Q 002392 850 LVTRLVKGTGKTTLAIGDGANDVGMLQEADIG--VGI-SGVE-GMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 850 ~iv~~l~~~g~~vlaiGDG~ND~~ml~~A~vG--Iam-~g~e-~~~ak~aAD~vi~~f~~l~~l 909 (928)
.+.+.+.-....++||||..+|+.|=+.|+++ +.+ .|.. .......||+++.++..+.++
T Consensus 116 ~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 116 SARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp HHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred chhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 33444433335699999999999999999995 344 3332 222456699999999888776
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.89 E-value=0.00068 Score=65.46 Aligned_cols=40 Identities=20% Similarity=0.214 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.|++.++++.|++.|+++.++|+... .+..+.+..|+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc
Confidence 4679999999999999999999998664 556677888874
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.75 E-value=0.00063 Score=65.87 Aligned_cols=123 Identities=14% Similarity=0.152 Sum_probs=78.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.++++.|+ +++++.++|+.....+..+.+..|+...-..
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 126 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMAV---------------------------------- 126 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEEE----------------------------------
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccccccc----------------------------------
Confidence 36699999999997 4799999999999999999988887532110
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
++.+... -.....|+--..+++.+.-....+++|||+.
T Consensus 127 --------------------i~~~~~~----------------------~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~ 164 (207)
T d2hdoa1 127 --------------------TISADDT----------------------PKRKPDPLPLLTALEKVNVAPQNALFIGDSV 164 (207)
T ss_dssp --------------------EECGGGS----------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred --------------------ccccccc----------------------ccchhhhhhhcccccceeeeccceeEecCCH
Confidence 1111000 0001112222223333322225689999999
Q ss_pred hcHHHHHhCCeeEEe--cCCcchhhhhcCcEeecccccchhh
Q 002392 870 NDVGMLQEADIGVGI--SGVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 870 ND~~ml~~A~vGIam--~g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
+|+.+-+.||+.... .|.........+|+++-++..|..+
T Consensus 165 ~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 165 SDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 206 (207)
T ss_dssp HHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred HHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHhh
Confidence 999999999998643 2333322456789998877766554
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.41 E-value=0.0026 Score=62.48 Aligned_cols=120 Identities=15% Similarity=0.132 Sum_probs=78.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
++.|++.++++.|+ +|++++++|+-.......+.+.+|+...-..++.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~------------------------------- 147 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITT------------------------------- 147 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEE-------------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccccc-------------------------------
Confidence 46799999999997 5899999999888888888898898432111110
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhc---CCCEEEEEc
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG---TGKTTLAIG 866 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~---~g~~vlaiG 866 (928)
+... - ...|+ ...+...+++ ....+++||
T Consensus 148 -----------------------s~~~----------------------~--~~KP~-~~~~~~~~~~l~~~p~~~l~vg 179 (230)
T d1x42a1 148 -----------------------SEEA----------------------G--FFKPH-PRIFELALKKAGVKGEEAVYVG 179 (230)
T ss_dssp -----------------------HHHH----------------------T--BCTTS-HHHHHHHHHHHTCCGGGEEEEE
T ss_pred -----------------------cccc----------------------c--ccchh-hHHHHHHHhhhcccccccceee
Confidence 0000 0 00111 1112222233 235699999
Q ss_pred CC-hhcHHHHHhCCeeE-Eec-CCcchhhhhcCcEeecccccchhh
Q 002392 867 DG-ANDVGMLQEADIGV-GIS-GVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 867 DG-~ND~~ml~~A~vGI-am~-g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
|. .+|+.+=+.||+.. .+. +....+....+|+++.+++.|..+
T Consensus 180 D~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~ 225 (230)
T d1x42a1 180 DNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKI 225 (230)
T ss_dssp SCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHH
T ss_pred cCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHH
Confidence 97 68999999999854 442 222333566789999999988777
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.39 E-value=0.0024 Score=63.14 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=38.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
.-.+.|++.+++++|+++|+++.++|+............+|+.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 3456899999999999999999999999998888888888874
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.21 E-value=0.0022 Score=58.30 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=28.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
++++.+++.+.++.|+++|++++++||++..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~ 64 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESG 64 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHH
Confidence 5788999999999999999999999999743
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.18 E-value=0.0027 Score=63.43 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=31.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~ 747 (928)
++.=+++.++|++|+++|++++++|+....+...+++.+
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333478999999999999999999988877777776654
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.03 E-value=0.0076 Score=59.51 Aligned_cols=40 Identities=20% Similarity=0.283 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
+-|++.++++.|++ |++++++|+..........+.+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 56899999999984 89999999999888888889999854
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.93 E-value=0.0046 Score=61.62 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=34.2
Q ss_pred EeeecccCCCChHHHHHHHHHcCCeEEEEcC---CcHhhHHHHHHHcCCc
Q 002392 704 ATAVEDKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLL 750 (928)
Q Consensus 704 ~~~ieD~lr~~~~~aI~~l~~aGIkv~ilTG---D~~~ta~~ia~~~gi~ 750 (928)
++.-.+++=+++.++|+.|+++|++++++|+ +........-+++|+-
T Consensus 13 TL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 13 VLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred eeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 3334455558999999999999999999984 4455555555667764
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.87 E-value=0.0077 Score=56.82 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~ 750 (928)
++.+|+++.|+.|++.|++++++|+.+.. +..+.+.+++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQ-VLEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccc-hhhhhhhhccc
Confidence 46799999999999999999999997654 44567778874
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.76 E-value=0.015 Score=53.55 Aligned_cols=40 Identities=23% Similarity=0.259 Sum_probs=30.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcH-hhHHHHHHHcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKM-ETAINIGYACSL 749 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~-~ta~~ia~~~gi 749 (928)
++.|++.++++.|+++|+++.++|+-+. ..+..+.+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997554 344444454444
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.10 E-value=0.012 Score=57.00 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=35.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 708 eD~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
..++-+++.+.++.|++.|+++.++|+... +..+.+..|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456789999999999999999999999754 567777788754
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.06 E-value=0.018 Score=55.40 Aligned_cols=124 Identities=13% Similarity=0.123 Sum_probs=79.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcccCceEEEEcCCCchhhHhhhhcchhHHHHHHHHHHHHH
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
.+.+++.++++.+++.|+++.++|+-....+..+....++...-..++...
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~----------------------------- 143 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVD----------------------------- 143 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESG-----------------------------
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeee-----------------------------
Confidence 456899999999999999999999999888888888777753322211100
Q ss_pred HHhhhhhccccccccceEEEEEccchhhHHhHHHHHHHHHHhhccCCceEEEeeCcccHHHHHHHHhcCCCEEEEEcCCh
Q 002392 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (928)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~p~qK~~iv~~l~~~g~~vlaiGDG~ 869 (928)
.. -.....|+-=..+.+.+.-....+++|||..
T Consensus 144 -------------------------~~----------------------~~~KP~p~~~~~~~~~~g~~p~e~l~VgD~~ 176 (220)
T d1zrna_ 144 -------------------------PV----------------------QVYKPDNRVYELAEQALGLDRSAILFVASNA 176 (220)
T ss_dssp -------------------------GG----------------------TCCTTSHHHHHHHHHHHTSCGGGEEEEESCH
T ss_pred -------------------------ee----------------------eccccHHHHHHHHHHHhCCCCceEEEEecCh
Confidence 00 0000111111112233322235699999999
Q ss_pred hcHHHHHhCCeeE-Eec--CCcchhhhhcCcEeecccccchhh
Q 002392 870 NDVGMLQEADIGV-GIS--GVEGMQAVMSSDYAIAQFRFLERL 909 (928)
Q Consensus 870 ND~~ml~~A~vGI-am~--g~e~~~ak~aAD~vi~~f~~l~~l 909 (928)
+|+.+=+.||+-. .+. +....+....+|++|.+++.|..|
T Consensus 177 ~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 177 WDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp HHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 9999999999864 342 333333445689999988777665
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.05 E-value=0.025 Score=54.19 Aligned_cols=26 Identities=31% Similarity=0.354 Sum_probs=23.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGD 735 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD 735 (928)
++-|++.++|+.|+++|+++.++|-.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 36799999999999999999999964
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.97 E-value=0.019 Score=54.28 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=32.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcH----hhHHHHHHHcCCcc
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKM----ETAINIGYACSLLR 751 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~----~ta~~ia~~~gi~~ 751 (928)
+.+++.+.++.+++.|++|+.+|||.. .|+.++.+.+|+..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 457899999999999999999999864 34566666678743
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.90 E-value=0.015 Score=57.94 Aligned_cols=51 Identities=18% Similarity=0.267 Sum_probs=36.6
Q ss_pred CCEEEEEcCCh-hcHHHHHhCCe-eEEe-cCCc-chhhh---hcCcEeecccccchhh
Q 002392 859 GKTTLAIGDGA-NDVGMLQEADI-GVGI-SGVE-GMQAV---MSSDYAIAQFRFLERL 909 (928)
Q Consensus 859 g~~vlaiGDG~-ND~~ml~~A~v-GIam-~g~e-~~~ak---~aAD~vi~~f~~l~~l 909 (928)
...++||||.. +|+.+-+.||+ +|.+ +|.. ..... ..+||++.++..|.++
T Consensus 202 ~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 202 KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred chhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 35699999995 69999999998 6665 3321 11122 2359999998888776
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.98 E-value=0.01 Score=58.99 Aligned_cols=64 Identities=11% Similarity=0.117 Sum_probs=39.8
Q ss_pred eCcccHHHHHHHHhcCCCEEEEEcCChh-cHHHHHhCCe-eEEe-cCC-cchhhhhc---CcEeecccccc
Q 002392 843 SSPKQKALVTRLVKGTGKTTLAIGDGAN-DVGMLQEADI-GVGI-SGV-EGMQAVMS---SDYAIAQFRFL 906 (928)
Q Consensus 843 ~~p~qK~~iv~~l~~~g~~vlaiGDG~N-D~~ml~~A~v-GIam-~g~-e~~~ak~a---AD~vi~~f~~l 906 (928)
.+|.--..+.+.+.-....++||||..+ |+.+-++||+ +|.+ +|. ...+.... .||++.++..+
T Consensus 181 P~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 181 PEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp TSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred CCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 3344334444444333357999999976 9999999999 7776 332 11112222 49999876543
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.67 E-value=0.51 Score=44.46 Aligned_cols=58 Identities=24% Similarity=0.346 Sum_probs=43.5
Q ss_pred ccHHHHHHHH-hcCC-CEEEEEcCChhcHHHHHhC----CeeEEecCCcchhhhhcCcEeeccccc
Q 002392 846 KQKALVTRLV-KGTG-KTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQFRF 905 (928)
Q Consensus 846 ~qK~~iv~~l-~~~g-~~vlaiGDG~ND~~ml~~A----~vGIam~g~e~~~ak~aAD~vi~~f~~ 905 (928)
..|..+++.. ...+ ...+.+||+..|+.||+.| |+.|+..|++- |...||++|..-+.
T Consensus 184 g~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~ 247 (308)
T d1y8aa1 184 GEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTA 247 (308)
T ss_dssp HHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSST
T ss_pred chhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccc--cccccceEEeccch
Confidence 4677777666 3222 3459999999999999998 45556678877 89999999986444
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.94 E-value=0.072 Score=45.22 Aligned_cols=77 Identities=19% Similarity=0.341 Sum_probs=48.6
Q ss_pred ecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCcccccceEEEEeEeecccCCcceeEEEEEcCCCcEEEEEecCc
Q 002392 542 EAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGAD 621 (928)
Q Consensus 542 ~~~sp~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 621 (928)
.+.||..+|+++++++.++.+..-+ .+.. .+|+|.. ...+++ |.+
T Consensus 25 ~S~HPlA~AIv~~a~~~~~~~~~~~--~~~~-----~~G~Gi~-------------------------g~~v~v---G~~ 69 (113)
T d2b8ea2 25 RSEHPIAEAIVKKALEHGIELGEPE--KVEV-----IAGEGVV-------------------------ADGILV---GNK 69 (113)
T ss_dssp TCCSHHHHHHHHHHHTTTCCCCCCS--CEEE-----ETTTEEE-------------------------ETTEEE---ECH
T ss_pred cCCCchHHHHHHHHHHhcCCCCccc--ccee-----eccceEE-------------------------eEEEEE---CcH
Confidence 3579999999999999886543211 1111 1222211 012333 888
Q ss_pred hhhHHHhcccchhhHHHHHHHHHHHHhcCCeeeEEE
Q 002392 622 SVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIA 657 (928)
Q Consensus 622 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A 657 (928)
..|.+. +-...+.+...++.+..+|..++.+|
T Consensus 70 ~~~~~~----~~~~~~~~~~~~~~~~~~G~T~v~va 101 (113)
T d2b8ea2 70 RLMEDF----GVAVSNEVELALEKLEREAKTAVIVA 101 (113)
T ss_dssp HHHHHT----TCCCCHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHhc----CCCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 776543 12344567788899999999999999
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.78 E-value=0.069 Score=51.16 Aligned_cols=52 Identities=12% Similarity=0.268 Sum_probs=38.3
Q ss_pred CCEEEEEcCChhcHHHHHhCCee-EEecCCc-c-----hhhh-hcCcEeecccccchhhh
Q 002392 859 GKTTLAIGDGANDVGMLQEADIG-VGISGVE-G-----MQAV-MSSDYAIAQFRFLERLL 910 (928)
Q Consensus 859 g~~vlaiGDG~ND~~ml~~A~vG-Iam~g~e-~-----~~ak-~aAD~vi~~f~~l~~ll 910 (928)
...+++|||+.+|+.+=+.||+- |++.+.. . .+.. .-||++|.+++.|..+|
T Consensus 158 p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 158 PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 35799999999999999999984 5664322 1 1112 23999999999987774
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=90.90 E-value=0.082 Score=48.10 Aligned_cols=27 Identities=30% Similarity=0.420 Sum_probs=24.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGDK 736 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD~ 736 (928)
++-|++.++|+.|+++|++++++|..+
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQD 56 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred eECccHHHHHHHHHHcCCceeeecccc
Confidence 356999999999999999999999753
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=87.06 E-value=0.8 Score=43.77 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=33.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhhHHHHHHHcCCcc
Q 002392 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (928)
Q Consensus 709 D~lr~~~~~aI~~l~~aGIkv~ilTGD~~~ta~~ia~~~gi~~ 751 (928)
.++-+++.+++++|+ |+.+.++|..+...+..+....|+..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~ 132 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD 132 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccc
Confidence 356789999999885 78899999999888888888888753
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=85.15 E-value=0.18 Score=47.90 Aligned_cols=26 Identities=12% Similarity=0.291 Sum_probs=23.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 002392 710 KLQKGVPECIDKLAQAGIKVWVLTGD 735 (928)
Q Consensus 710 ~lr~~~~~aI~~l~~aGIkv~ilTGD 735 (928)
.+.+++.+.+..|+++|++++++|+-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~ 122 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNN 122 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCccHHHHHHHHHhcCCceEEeecc
Confidence 36789999999999999999999973
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.71 E-value=0.53 Score=44.14 Aligned_cols=28 Identities=14% Similarity=0.246 Sum_probs=24.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 002392 711 LQKGVPECIDKLAQAGIKVWVLTGDKME 738 (928)
Q Consensus 711 lr~~~~~aI~~l~~aGIkv~ilTGD~~~ 738 (928)
+.+++.+++..|++.|++++++|+....
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLD 127 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCccHHHHHHHHHhccCccccccccchh
Confidence 5789999999999999999999975433
|