Citrus Sinensis ID: 002402

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------

MRKRPQPEASSSSSSASKSEPQASDEQIKTGSSNDIHVRSAKRSGLAWTVAFAAFVYATYGVYYYQYEHMPPPLTADQAGKRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNANRKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

ccccccccccccccccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEcccccccccccccccEEEEcccEEEEEEEcccccccccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccHHHHHHccccccccEEEEEEEcccccccccccccccHHHHHHHHHHcccccccccHHcccccccccccccHHHHHHcccccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEccccccccccccEEEEEEccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEEccccEEEEEEEccccccEEEEcccccccccccccccccEEEEEEEccccccEEEEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEccccccc

cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccEcEEEcccccccEEEEcccEEEEEEEcccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHcccccHHccEEEEEEHHccccccEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHccccccccccEEEEccccccccEEEEEcccEEEEEcccccccccccHHHHHHHHHHHHHHHHHccHHcccHHHHccccccccccEEEEEHHHEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHcccHHEHHEHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEEEEEEcccccEEEEEEcccccccccHHHHHcccccEcccccEEEEEEEEEEEccEcccccccccccccccccEEccccEEEEEccccccccEEEEEEEcccccEEEEEEcccccccEEEEcccHHccccccccccccEEEEEEccccccccEEEEEEEEcccccccccccccccccccEEEEEcccccccHHHHHHHHHcccccccccccccHHHHHHHHcccccc

mrkrpqpeassssssasksepqasdeqiktgssndihvRSAKRSGLAWTVAFAAFVYATYGVyyyqyehmpppltadqagkrgfSEFEAIKHVKAltelgphpvgsdalDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTvfaaegagdcSSCVAVMLELARAMSQWAHGFKNAVIFLFNtgeeeglngahsfvtqhpwsTTIRVAIDLEamgiggksglfqagphpwavENFAaaakypsgqvtaqdlfasgaitsatdFQVYKEVAglsgldfaytdksavyhtkndkldllkpgslqhLGENMLAFLLQAasstslpkgnamekegktvHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFIlpqissspvpyvanpwlaVGLFAAPAFLGALTGQHLGYIILKAYLANMFSkrmqlspivqADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALfwlvppafaygfleatltpvrfprpLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRfdrnpggtpewlGNVILAVFIAVVLCLTLVYLLSYVhlsgakrpiAIASCVLFVLSLILVLsgtvppfsedtaRAVNVVHVVDasgkfggkqepssfialysttpgkltKEVEQIKEGFVCGRDNVVDFVTLSMEYGcltydgteggwsqsdvptihvesegfgimdtkgndngrITKVSIDMKGSVRWSLAidaeeiedftfkegseelvprdeksgmdgwhiiqfsggknavskfdldlywaknstesyhnanrkekqrpllklrtdfdrltpktervlsklpawcslfgkstspqtlsflnslpvnf

mrkrpqpeassssssasksepqasdeqiktgssndiHVRSAKRSGLAWTVAFAAFVYATYGVYYYQYEHMPPPLTADQAGKRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASgkfggkqepssfiALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGfgimdtkgndnGRITKVSIDMKGSVRWSLAIDaeeiedftfkegseelvprdeksgMDGWHIIQFSGGKNAVSKFDLDLYWAKNStesyhnanrkekqrpllklrtdfdrltpktervlskLPAWCSLFgkstspqtlsflnslpvnf

MRKRpqpeassssssasksepqasDEQIKTGSSNDIHVRSAKRSGLawtvafaafvyatygvyyyQYEHMPPPLTADQAGKRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLvfsvsfavviafiLPQISSSPVPYVANPWlavglfaapaflgalTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFprplklatlllglavpvlvsaGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIAscvlfvlslilvlsGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNANRKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

*******************************************SGLAWTVAFAAFVYATYGVYYYQYEHMPPPLT*****KRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ******************TVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGG****SSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFK**************MDGWHIIQFSGGKNAVSKFDLDLYWAKN*********************TDFDRLTPKTERVLSKLPAWCSLFGK*****************

*******************************************SGLAWTVAFAAFVYATYGVYYYQYE******************FEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPK***EAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLP***********VHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGF***********RITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVP*DEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNANRKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

******************************GSSNDIHVRSAKRSGLAWTVAFAAFVYATYGVYYYQYEHMPPPLTADQAGKRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTS**********GKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNANRKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

*****************************************KRSGLAWTVAFAAFVYATYGVYYYQYEHMPPPLTADQAGKRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNA*EKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKN************KQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		927	2.2.26 [Sep-21-2011]
Q7Z2K6		904	Endoplasmic reticulum met	yes	no	0.599	0.615	0.275	4e-55
Q3UVK0		898	Endoplasmic reticulum met	yes	no	0.603	0.622	0.270	2e-54
Q6UPR8		898	Endoplasmic reticulum met	yes	no	0.607	0.626	0.272	1e-51
Q09216		895	Uncharacterized protein B	yes	no	0.545	0.565	0.289	2e-50
Q0VGW4		876	Endoplasmic reticulum met	N/A	no	0.606	0.641	0.266	6e-49
Q18600		895	Uncharacterized zinc meta	no	no	0.445	0.461	0.260	4e-41
O94702		822	Uncharacterized zinc meta	yes	no	0.384	0.433	0.302	1e-37
Q6CDE6		989	Probable zinc metalloprot	yes	no	0.269	0.252	0.338	1e-27
B9WCV6		930	Probable zinc metalloprot	yes	no	0.360	0.359	0.305	5e-25
A5DZ28		960	Probable zinc metalloprot	N/A	no	0.372	0.359	0.285	6e-25

>sp\|Q7Z2K6\|ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1 OS=Homo sapiens GN=ERMP1 PE=1 SV=2	Back alignment and function desciption

 Score =  217 bits (552), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 175/635 (27%), Positives = 307/635 (48%), Gaps = 79/635 (12%)

Query: 79  AGKRG-FSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVD 137
           AG RG F   +A  +++ +T +GP   GS   +  L V+      K+       ++V+ +
Sbjct: 101 AGHRGEFDALQARDYLEHITSIGPRTTGSPE-NEILTVHYLLEQIKL-------IEVQSN 152

Query: 138 FFHAKSGANRLVSGAFM-----GRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTV 192
             H  S   +  +G+F      G T  Y ++ ++V++++P+   + A++A+L + H D+V
Sbjct: 153 SLHKISVDVQRPTGSFSIDFLGGFTSYYDNITNVVVKLEPR---DGAQHAVLANCHFDSV 209

Query: 193 FAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWST 252
             + GA D +   +VMLE+ R +S  +    +AVIFLFN  EE  L  +H F+TQHPW++
Sbjct: 210 ANSPGASDDAVSCSVMLEVLRVLSTSSEALHHAVIFLFNGAEENVLQASHGFITQHPWAS 269

Query: 253 TIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAAAAKYPSGQVTAQDLFASGAITSATD 311
            IR  I+LEA G+GGK  +FQ GP +PW V+ + +AAK+P   V AQ++F SG I S TD
Sbjct: 270 LIRAFINLEAAGVGGKELVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPSDTD 329

Query: 312 FQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLP 371
           F++Y++   + G+D A+ +   +YHTK D  D +   S+Q  G+N+LA L   A+S  L 
Sbjct: 330 FRIYRDFGNIPGIDLAFIENGYIYHTKYDTADRILTDSIQRAGDNILAVLKHLATSDMLA 389

Query: 372 KGNAMEKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVM----- 426
             +      K  H   V+FD+LG +++ Y     +++ N ++V  ++++     +     
Sbjct: 390 AAS------KYRHGNMVFFDVLGLFVIAYPSRIGSII-NYMVVMGVVLYLGKKFLQPKHK 442

Query: 427 -GGYPA--AVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAA 483
            G Y       L +T +S    LV  +  AV I+ I   +S     +  + +++V L+  
Sbjct: 443 TGNYKKDFLCGLGITLISWFTSLVTVLIIAVFISLIGQSLS-----WYNHFYVSVCLYGT 497

Query: 484 PAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILL 543
                      +  IIL   LA  F   M  S        +   E +   + F+    L+
Sbjct: 498 AT---------VAKIILIHTLAKRF-YYMNASA-------QYLGEVFFDISLFVHCCFLV 540

Query: 544 ALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLK--------LATLLLGLAV 595
            L  +  + S FI+  W+  P          LT +   +  K        +A  LLG+ +
Sbjct: 541 TL-TYQGLCSAFISAVWVAFP---------LLTKLCVHKDFKQHGAQGKFIAFYLLGMFI 590

Query: 596 PVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHL 655
           P L +      +  +   I+ R         E   +V+LA  +A    +   Y +++++L
Sbjct: 591 PYLYALYLIWAVFEMFTPILGR------SGSEIPPDVVLASILAGCTMILSSYFINFIYL 644

Query: 656 SGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTA 690
           + + +   +   ++  ++ +LV SGT  P+S + A
Sbjct: 645 AKSTKKTMLTLTLVCAITFLLVCSGTFFPYSSNPA 679

Within the ovary, required for the organization of somatic cells and oocytes into discrete follicular structures.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: -EC: .EC: -

>sp\|Q3UVK0\|ERMP1_MOUSE Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus GN=Ermp1 PE=1 SV=2	Back alignment and function description

>sp\|Q6UPR8\|ERMP1_RAT Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus GN=Ermp1 PE=1 SV=1	Back alignment and function description

>sp\|Q09216\|YP67_CAEEL Uncharacterized protein B0495.7 OS=Caenorhabditis elegans GN=B0495.7 PE=1 SV=2	Back alignment and function description

>sp\|Q0VGW4\|ERMP1_XENLA Endoplasmic reticulum metallopeptidase 1 OS=Xenopus laevis GN=ermp1 PE=2 SV=1	Back alignment and function description

>sp\|Q18600\|YTV2_CAEEL Uncharacterized zinc metalloprotease C44B7.11 OS=Caenorhabditis elegans GN=C44B7.11 PE=1 SV=4	Back alignment and function description

>sp\|O94702\|YC52_SCHPO Uncharacterized zinc metalloprotease C1259.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1259.02c PE=3 SV=1	Back alignment and function description

>sp\|Q6CDE6\|M28P1_YARLI Probable zinc metalloprotease YALI0C01133g OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0C01133g PE=3 SV=1	Back alignment and function description

>sp\|B9WCV6\|M28P1_CANDC Probable zinc metalloprotease CD36_24500 OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=CD36_24500 PE=3 SV=1	Back alignment and function description

>sp\|A5DZ28\|M28P1_LODEL Probable zinc metalloprotease LELG_02615 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=LELG_02615 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		927
225449044		900	PREDICTED: endoplasmic reticulum metallo	0.953	0.982	0.715	0.0
255584015		921	ATP binding protein, putative [Ricinus c	0.985	0.992	0.679	0.0
449449477		908	PREDICTED: endoplasmic reticulum metallo	0.974	0.994	0.648	0.0
357443249		917	Endoplasmic reticulum metallopeptidase [	0.975	0.985	0.654	0.0
356533971		912	PREDICTED: endoplasmic reticulum metallo	0.942	0.958	0.684	0.0
297808135		911	hypothetical protein ARALYDRAFT_910108 [	0.973	0.990	0.610	0.0
15242031		910	vacuolar protein / peptidase dimerizatio	0.969	0.987	0.606	0.0
326494824		907	predicted protein [Hordeum vulgare subsp	0.966	0.987	0.575	0.0
357164731		909	PREDICTED: endoplasmic reticulum metallo	0.967	0.986	0.569	0.0
32487866		868	OSJNBb0061C13.16 [Oryza sativa Japonica	0.930	0.994	0.582	0.0

>gi\|225449044\|ref\|XP_002274159.1\| PREDICTED: endoplasmic reticulum metallopeptidase 1 [Vitis vinifera] gi\|296086015\|emb\|CBI31456.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1340 bits (3467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/896 (71%), Positives = 764/896 (85%), Gaps = 12/896 (1%)

Query: 34  NDIHVRSAKRSGLAWTVAFAAFVYATYGVYYYQYEHMPPPLTADQAGKRGFSEFEAIKHV 93
           N   V+  KRS L W   F   +Y ++ V+YYQ+++MP PL AD AGKRGFSE EAI+HV
Sbjct: 15  NSSGVKYPKRSALVWLALFVVIIYFSWAVHYYQFDNMPAPLGADHAGKRGFSEVEAIRHV 74

Query: 94  KALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAF 153
           +ALT++GPH +GSDALD ALQ YV A A+KIK+  HWEVDV+VDFFHAKSGANR+VSG F
Sbjct: 75  RALTQVGPHSIGSDALDDALQ-YVLAEAEKIKKMAHWEVDVQVDFFHAKSGANRMVSGLF 133

Query: 154 MGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELAR 213
           +G+TLIYSDL HI+LRI PKYASEA +NAILVSSHIDTVF+ EGAGDCSSCVAVMLELAR
Sbjct: 134 VGKTLIYSDLYHIILRILPKYASEAEDNAILVSSHIDTVFSTEGAGDCSSCVAVMLELAR 193

Query: 214 AMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQ 273
            +SQWAHGFKNAVIFLFNTGEEEGLNGAHSF+TQHPWS+TIR+AIDLEAMGIGGKS +FQ
Sbjct: 194 GVSQWAHGFKNAVIFLFNTGEEEGLNGAHSFITQHPWSSTIRMAIDLEAMGIGGKSSIFQ 253

Query: 274 AGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSA 333
           AGPHP A+ENFA AAKYP+GQ+ +QD+F+SG I SATDFQVY+EVAGLSGLDFAYTD SA
Sbjct: 254 AGPHPLAIENFAKAAKYPNGQIVSQDIFSSGVIKSATDFQVYQEVAGLSGLDFAYTDNSA 313

Query: 334 VYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDIL 393
           VYHTKNDKL+LLKPGSLQHLG+NMLAFLLQ A S +LPKG AME E KT HETA++FDIL
Sbjct: 314 VYHTKNDKLELLKPGSLQHLGDNMLAFLLQTAPS-NLPKGKAMEAEEKTGHETAIFFDIL 372

Query: 394 GTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFA 453
           GTYMV+YRQ FAN+LHNSVI+QS+LIW  SL+MGGYPAAVSLAL+CLS ILM +FS+SF+
Sbjct: 373 GTYMVVYRQRFANLLHNSVIMQSILIWVTSLLMGGYPAAVSLALSCLSVILMWIFSLSFS 432

Query: 454 VVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQ 513
           + + F+LP ISSSPVP+VANPWL VGLFAAPAFLGALTGQHLGY+IL +YL++  SKRMQ
Sbjct: 433 IPVGFLLPLISSSPVPFVANPWLVVGLFAAPAFLGALTGQHLGYLILHSYLSHASSKRMQ 492

Query: 514 -LSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLE 572
            LSP++QAD+IK EAERWLFKAGF+QW +LL +GN+YKIGS+++AL WLV PAFAYGFLE
Sbjct: 493 NLSPVIQADVIKFEAERWLFKAGFVQWFVLLMVGNYYKIGSSYVALVWLVSPAFAYGFLE 552

Query: 573 ATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNV 632
           ATL+PVR PRPLK+ TLL+G+++P+L+SAG FIR+A  ++   VRFDRNPG TPEWLGNV
Sbjct: 553 ATLSPVRLPRPLKIVTLLMGISLPILLSAGMFIRMAGTLIGTAVRFDRNPGSTPEWLGNV 612

Query: 633 ILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARA 692
           I+A++IA V+CLTL YLLSY HLSGAK+ I +++C+LF LSL +VLSGTVP F+EDTARA
Sbjct: 613 IIAIYIAAVICLTLAYLLSYFHLSGAKKSIVLSTCMLFGLSLAVVLSGTVPSFTEDTARA 672

Query: 693 VNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSME 752
           VNVVHVVD + K+G  Q+P S+I+++STTPG L KEVEQI EGFVCGRD V+DFVT S++
Sbjct: 673 VNVVHVVDTTEKYGEMQDPRSYISIFSTTPGNLIKEVEQINEGFVCGRDKVLDFVTFSVK 732

Query: 753 YGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDA 812
           YGCLT D   GGWS+SD+P +HV+S      DT+G  +GR T++SID K S RWSLAI+ 
Sbjct: 733 YGCLTNDDIGGGWSKSDIPVLHVDS------DTEG--DGRTTQISIDTKVSTRWSLAINT 784

Query: 813 EEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNAN 872
           +EIEDF FKE S+ELVP   K   +GWHI QFSGGKN+ ++FDL L+W KNST+S HNA+
Sbjct: 785 QEIEDFLFKENSDELVPLGGKGSNNGWHIFQFSGGKNSPTRFDLTLFWRKNSTKSAHNAD 844

Query: 873 -RKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF 927
            ++ +QRPLLKLRTD +RLTPK  RVL+KLP+WCS FGKSTSP  L+FL SLPV F
Sbjct: 845 GQRAEQRPLLKLRTDVNRLTPKAARVLTKLPSWCSQFGKSTSPYNLAFLTSLPVLF 900

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255584015\|ref\|XP_002532753.1\| ATP binding protein, putative [Ricinus communis] gi\|223527504\|gb\|EEF29630.1\| ATP binding protein, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|449449477\|ref\|XP_004142491.1\| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|357443249\|ref\|XP_003591902.1\| Endoplasmic reticulum metallopeptidase [Medicago truncatula] gi\|355480950\|gb\|AES62153.1\| Endoplasmic reticulum metallopeptidase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356533971\|ref\|XP_003535531.1\| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|297808135\|ref\|XP_002871951.1\| hypothetical protein ARALYDRAFT_910108 [Arabidopsis lyrata subsp. lyrata] gi\|297317788\|gb\|EFH48210.1\| hypothetical protein ARALYDRAFT_910108 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|15242031\|ref\|NP_197566.1\| vacuolar protein / peptidase dimerization domain-containing protein [Arabidopsis thaliana] gi\|110741500\|dbj\|BAE98701.1\| 24 kDa vacuolar protein - like [Arabidopsis thaliana] gi\|332005489\|gb\|AED92872.1\| vacuolar protein / peptidase dimerization domain-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|326494824\|dbj\|BAJ94531.1\| predicted protein [Hordeum vulgare subsp. vulgare] gi\|326513062\|dbj\|BAK03438.1\| predicted protein [Hordeum vulgare subsp. vulgare]	Back alignment and taxonomy information

>gi\|357164731\|ref\|XP_003580148.1\| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Brachypodium distachyon]	Back alignment and taxonomy information

>gi\|32487866\|emb\|CAE05634.1\| OSJNBb0061C13.16 [Oryza sativa Japonica Group] gi\|32492244\|emb\|CAE03741.1\| OSJNBa0019D11.4 [Oryza sativa Japonica Group] gi\|116310817\|emb\|CAH67606.1\| OSIGBa0145G11.5 [Oryza sativa Indica Group] gi\|218195229\|gb\|EEC77656.1\| hypothetical protein OsI_16670 [Oryza sativa Indica Group]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		927
TAIR\|locus:2180494		910	AT5G20660 [Arabidopsis thalian	0.932	0.949	0.569	2e-269
UNIPROTKB\|E7ER77		841	ERMP1 "Endoplasmic reticulum m	0.352	0.388	0.343	1.5e-49
UNIPROTKB\|Q7Z2K6		904	ERMP1 "Endoplasmic reticulum m	0.352	0.361	0.343	3.5e-49
MGI\|MGI:106250		898	Ermp1 "endoplasmic reticulum m	0.353	0.365	0.344	2.3e-48
UNIPROTKB\|F1MI95		892	ERMP1 "Uncharacterized protein	0.365	0.380	0.333	2.3e-48
UNIPROTKB\|E1C3Q6		885	ERMP1 "Uncharacterized protein	0.364	0.381	0.344	4.4e-48
UNIPROTKB\|F1PSG1		896	ERMP1 "Uncharacterized protein	0.349	0.361	0.335	5.4e-48
FB\|FBgn0034436		891	CG11961 [Drosophila melanogast	0.338	0.352	0.353	1.3e-47
UNIPROTKB\|F1SMM0		905	ERMP1 "Uncharacterized protein	0.352	0.361	0.332	4.8e-47
RGD\|727831		898	Ermp1 "endoplasmic reticulum m	0.352	0.364	0.346	8.8e-47

TAIR\|locus:2180494 AT5G20660 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2591 (917.1 bits), Expect = 2.0e-269, P = 2.0e-269
 Identities = 506/888 (56%), Positives = 628/888 (70%)

Query:    42 KRSGLXXXXXXXXXXXXXXXXXXXQYEHMPPPLTADQAGKRGFSEFEAIKHVKALTELGP 101
             KRSG                    Q  ++P PLTA QAGKRGFSE EAIKHVKALT+ GP
Sbjct:    39 KRSGKVWLSVLILITYSSWFVYNYQLGNLPKPLTAKQAGKRGFSEIEAIKHVKALTQFGP 98

Query:   102 HPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS 161
             HPV SDAL  AL+ YV A  +K+KET HWEVDV VDFF +K G NRLV G F G++L+YS
Sbjct:    99 HPVSSDALVHALE-YVLAEVEKVKETAHWEVDVNVDFFESKFGVNRLVGGLFKGKSLVYS 157

Query:   162 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHG 221
             D++HIVLRI PKY S+A +NAILVSSHIDTVF   GAGDCSSCVAVMLELAR+ SQ AHG
Sbjct:   158 DISHIVLRILPKYESDAGDNAILVSSHIDTVFTTGGAGDCSSCVAVMLELARSASQSAHG 217

Query:   222 FKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAV 281
             FKN++IFLFNTGEEEGLNGAHSF+TQHPWS+T+R+AIDLEAMG GGKS +FQAGP PWA+
Sbjct:   218 FKNSIIFLFNTGEEEGLNGAHSFITQHPWSSTVRLAIDLEAMGTGGKSSIFQAGPSPWAI 277

Query:   282 ENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDK 341
             ENFA AAKYPSGQ+  QDLF SG I SATDFQVYKEVAGLSGLDFA+ D +AVYHTKNDK
Sbjct:   278 ENFALAAKYPSGQIIGQDLFTSGIIKSATDFQVYKEVAGLSGLDFAFADNTAVYHTKNDK 337

Query:   342 LDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDILGTYMVLYR 401
             ++L+KPGSLQHLGENMLAFLL+ ASS+ LPK   ++ E ++  ++AVYFD+LG YM++YR
Sbjct:   338 IELIKPGSLQHLGENMLAFLLRVASSSDLPKDKTLQGEERSNPDSAVYFDVLGKYMIVYR 397

Query:   402 QGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLXXXXXXXXXXXXXLP 461
             Q  A ML+ SVI+QS+LIW  S+ MGGYPA VSL L+CLS IL               LP
Sbjct:   398 QSLATMLYVSVIMQSILIWVLSVFMGGYPAVVSLILSCLSIILSWIFSVAFSVAVAFILP 457

Query:   462 QISSSPVPYVANPWXXXXXXXXXXXXXXXTGQHLGYIILKAYLANMFSKRMQLSPIVQAD 521
              ISSSPVP+ +NPW               +GQH+ +I L+   +N  S +MQ+SP ++ +
Sbjct:   458 WISSSPVPFASNPWMVVGLFVSPAILGSISGQHVAFIFLRKKSSNRNSNKMQVSPRLRDN 517

Query:   522 LIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFX 581
             L +LEAERWLFK+GF+QWL+LLALG +YK+GST++AL WLVPPAFAYG LEATL+P+R  
Sbjct:   518 LARLEAERWLFKSGFIQWLVLLALGTYYKLGSTYLALVWLVPPAFAYGLLEATLSPIRLP 577

Query:   582 XXXXXXXXXXXXXXXXXXXXGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVV 641
                                 G+FI+L   ++ +++RFD NPG TPEWLG+ ++AV IA  
Sbjct:   578 KPLKLATLLISLAVPILVSSGSFIQLTGTMIGMLIRFDSNPGVTPEWLGSALIAVAIATF 637

Query:   642 LCLTLVYLLSYVHLSGAKRPIAIAXXXXXXXXXXXXXXGTVPPFSEDTARAVNVVHVVDA 701
             + L++VYLL+Y+HLSGAK+ I  A              G +P F+EDTARAVNVVHVVD 
Sbjct:   638 ISLSMVYLLAYIHLSGAKKSIVTALCIITALSLALVSSGVLPAFTEDTARAVNVVHVVDT 697

Query:   702 SGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGT 761
             SG     Q+  +FI+L+S TPG L  E EQIKEGF CGR+N +DFV+   +Y C+T    
Sbjct:   698 SG-----QDQVAFISLFSNTPGNLNMEAEQIKEGFRCGRENKIDFVSFEAKYNCVTKKDA 752

Query:   762 EGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFK 821
             E GW + D+P + V       ++ K  + GR+  VS+D  GS RW+L ID +EIEDFT +
Sbjct:   753 EVGWDKHDIPVLRV-------INDKEREGGRVIAVSMDTGGSSRWTLRIDMDEIEDFTMQ 805

Query:   822 EGSEE----LVPRDEKSGMD-GWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNANRKEK 876
              G EE    ++ R EKS  + GWH IQF+GGK A + F L LY  +  ++       K+K
Sbjct:   806 VGEEEEEELMIERGEKSSNEEGWHQIQFAGGKKAPTSFVLKLYKEEEVSDD------KKK 859

Query:   877 QRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLP 924
             QRPLLKLRTD +R TP+ +RVL +LP +C++FGKSTSP TL+FL SLP
Sbjct:   860 QRPLLKLRTDLNRRTPQVQRVLERLPPFCTMFGKSTSPFTLAFLASLP 907

GO:0006508 "proteolysis" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB\|E7ER77 ERMP1 "Endoplasmic reticulum metallopeptidase 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q7Z2K6 ERMP1 "Endoplasmic reticulum metallopeptidase 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:106250 Ermp1 "endoplasmic reticulum metallopeptidase 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MI95 ERMP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|E1C3Q6 ERMP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PSG1 ERMP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

FB\|FBgn0034436 CG11961 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SMM0 ERMP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

RGD\|727831 Ermp1 "endoplasmic reticulum metallopeptidase 1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00018186001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (900 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		927
cd03875		307	cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasm	1e-117
pfam04389		173	pfam04389, Peptidase_M28, Peptidase family M28	1e-46
cd02690		252	cd02690, M28, M28 Zn-peptidases include aminopepti	2e-17
COG2234		435	COG2234, Iap, Predicted aminopeptidases [General f	6e-11
cd08015		275	cd08015, M28_like_4, M28 Zn-Peptidases	1e-08
cd03877		254	cd03877, M28_like_PA, M28 Zn-Peptidases containing	2e-08
cd05642		348	cd05642, M28_AAP_like, M28 Zn-Peptidase Aeromonas	5e-08
cd05662		267	cd05662, M28_like_2, M28 Zn-Peptidases	2e-07
cd03896		359	cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspar	5e-07
cd08656		281	cd08656, M28_like_6, M28 Zn-Peptidases	1e-06
cd03876		288	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomy	3e-06
cd05661		305	cd05661, M28_like_PA_2, M28 Zn-Peptidases containi	3e-06
cd05660		306	cd05660, M28_like_PA_1, M28 Zn-Peptidases containi	1e-05
cd08022		286	cd08022, M28_PSMA_like, M28 Zn-peptidase prostate-	3e-05
cd05663		260	cd05663, M28_like_PA_PDZ_associated, M28 Zn-Peptid	8e-05
cd03874		279	cd03874, M28_PMSA_TfR_like, M28 Zn-peptidase Trans	9e-05
cd05640		279	cd05640, M28_like_1, M28 Zn-Peptidases	6e-04
cd08021		277	cd08021, M28_like_5, M28 Zn-Peptidase IAP aminopep	0.002
cd03879		285	cd03879, M28_AAP, M28 Zn-Peptidase Aeromonas (Vibr	0.002
COG1363		355	COG1363, FrvX, Cellulase M and related proteins [C	0.004

>gnl\|CDD\|193497 cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1	Back alignment and domain information

 Score =  360 bits (927), Expect = e-117
 Identities = 139/322 (43%), Positives = 186/322 (57%), Gaps = 17/322 (5%)

Query: 81  KRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKET--KHWEVDVEVDF 138
              FSE  A  H++AL  +GPHP GS   D+    Y+    ++I        EV+V+ D+
Sbjct: 1   PEQFSEERAWSHLRALASIGPHPYGSANEDKVRD-YLLERLEEIGGRASNSLEVEVQDDY 59

Query: 139 FHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGA 198
               S           G T +Y +  +IV+RI  K      E A+L+++H D+V  + GA
Sbjct: 60  GSGSSD------FLGGGMTSVYFEGTNIVVRISGKNNGS--EGALLLNAHYDSVPTSPGA 111

Query: 199 GDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAI 258
            D  S VAVMLE+ RA+++     K  VIFLFN  EE GL GAH F+TQHPW+  +R  I
Sbjct: 112 SDDGSGVAVMLEVLRALAKSGEPPKRDVIFLFNGAEENGLLGAHGFITQHPWAKNVRAFI 171

Query: 259 DLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEV 318
           +LEA G GG++ LFQ GP PW VE +  AA +P   V AQD+F SG I S TDF+V++E 
Sbjct: 172 NLEAAGAGGRAILFQTGPGPWLVEAYYKAAPHPFATVLAQDVFQSGLIPSDTDFRVFREY 231

Query: 319 AGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEK 378
            GL GLD A+ +   VYHTK D  D + PGSLQH+GEN+LA L   A+S  L      E 
Sbjct: 232 GGLPGLDIAFIENGYVYHTKYDTADHISPGSLQHMGENLLALLRYLANSDEL------EN 285

Query: 379 EGKTVHETAVYFDILGTYMVLY 400
           + +     AVYFD+LG + V+Y
Sbjct: 286 DSEYRGGDAVYFDLLGLFFVVY 307

Peptidase family M28; Endoplasmic reticulum metallopeptidase 1 (ERMP1; Felix-ina, FXNA or Fxna peptidase; KIAA1815) subfamily. ERMP1 is a multi-pass membrane protein located in the endoplasmic reticulum membrane. In humans, Fxna may play a crucial role in processing proteins required for the organization of somatic cells and oocytes into discrete follicular structures, although which proteins are hydrolyzed has not yet been determined. Another member of this cluster is the 24-kDa vacuolar protein (VP24) which is probably involved in the formation of intravacuolar pigmented globules (cyanoplasts) in highly anthocyanin-containing vacuoles; however, the biological function of the C-terminal region which includes the putative transmembrane metallopeptidase domain is unknown. Length = 307

>gnl\|CDD\|218057 pfam04389, Peptidase_M28, Peptidase family M28	Back alignment and domain information

>gnl\|CDD\|193493 cd02690, M28, M28 Zn-peptidases include aminopeptidases and carboxypeptidases	Back alignment and domain information

>gnl\|CDD\|225143 COG2234, Iap, Predicted aminopeptidases [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|193563 cd08015, M28_like_4, M28 Zn-Peptidases	Back alignment and domain information

>gnl\|CDD\|193499 cd03877, M28_like_PA, M28 Zn-Peptidases containing a PA domain insert	Back alignment and domain information

>gnl\|CDD\|193520 cd05642, M28_AAP_like, M28 Zn-Peptidase Aeromonas (Vibrio) proteolytica aminopeptidase (AAP)-like	Back alignment and domain information

>gnl\|CDD\|193538 cd05662, M28_like_2, M28 Zn-Peptidases	Back alignment and domain information

>gnl\|CDD\|193516 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins	Back alignment and domain information

>gnl\|CDD\|193569 cd08656, M28_like_6, M28 Zn-Peptidases	Back alignment and domain information

>gnl\|CDD\|193498 cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus Aminopeptidase and similar proteins	Back alignment and domain information

>gnl\|CDD\|193537 cd05661, M28_like_PA_2, M28 Zn-Peptidases containing a PA domain insert	Back alignment and domain information

>gnl\|CDD\|193536 cd05660, M28_like_PA_1, M28 Zn-Peptidases containing a PA domain insert	Back alignment and domain information

>gnl\|CDD\|193568 cd08022, M28_PSMA_like, M28 Zn-peptidase prostate-specific membrane antigen	Back alignment and domain information

>gnl\|CDD\|193539 cd05663, M28_like_PA_PDZ_associated, M28 Zn-Peptidases containing a PA domain insert and associated with a PDZ domain	Back alignment and domain information

>gnl\|CDD\|193496 cd03874, M28_PMSA_TfR_like, M28 Zn-peptidase Transferrin Receptor-like family	Back alignment and domain information

>gnl\|CDD\|193519 cd05640, M28_like_1, M28 Zn-Peptidases	Back alignment and domain information

>gnl\|CDD\|193567 cd08021, M28_like_5, M28 Zn-Peptidase IAP aminopeptidase may contain PA domain insert	Back alignment and domain information

>gnl\|CDD\|193500 cd03879, M28_AAP, M28 Zn-Peptidase Aeromonas (Vibrio) proteolytica aminopeptidase	Back alignment and domain information

>gnl\|CDD\|224282 COG1363, FrvX, Cellulase M and related proteins [Carbohydrate transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		927
KOG2194		834	consensus Aminopeptidases of the M20 family [Postt	100.0
PRK10199		346	alkaline phosphatase isozyme conversion aminopepti	99.96
PF04389		179	Peptidase_M28: Peptidase family M28; InterPro: IPR	99.96
KOG2195		702	consensus Transferrin receptor and related protein	99.89
KOG3946		338	consensus Glutaminyl cyclase [Posttranslational mo	99.81
COG2234		435	Iap Predicted aminopeptidases [General function pr	99.73
TIGR03176		406	AllC allantoate amidohydrolase. This enzyme cataly	99.47
PRK12890		414	allantoate amidohydrolase; Reviewed	99.38
PRK12891		414	allantoate amidohydrolase; Reviewed	99.37
TIGR01879		401	hydantase amidase, hydantoinase/carbamoylase famil	99.36
PRK13590		591	putative bifunctional OHCU decarboxylase/allantoat	99.35
PRK13799		591	unknown domain/N-carbamoyl-L-amino acid hydrolase	99.34
PRK09290		413	allantoate amidohydrolase; Reviewed	99.32
PRK09133		472	hypothetical protein; Provisional	99.3
PF05450		234	Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri	99.28
PRK12892		412	allantoate amidohydrolase; Reviewed	99.27
PRK12893		412	allantoate amidohydrolase; Reviewed	99.27
PRK06133		410	glutamate carboxypeptidase; Reviewed	99.26
PRK08596		421	acetylornithine deacetylase; Validated	99.22
TIGR01910		375	DapE-ArgE acetylornithine deacetylase or succinyl-	99.19
PRK08588		377	succinyl-diaminopimelate desuccinylase; Reviewed	99.19
COG4882		486	Predicted aminopeptidase, Iap family [General func	99.19
PRK07473		376	carboxypeptidase; Provisional	99.18
PF09940		386	DUF2172: Domain of unknown function (DUF2172); Int	99.14
PRK07906		426	hypothetical protein; Provisional	99.13
TIGR01893		477	aa-his-dipept aminoacyl-histidine dipeptidase.	99.13
KOG2526		555	consensus Predicted aminopeptidases - M20/M25/M40	99.12
PRK07338		402	hypothetical protein; Provisional	99.1
PRK04443		348	acetyl-lysine deacetylase; Provisional	99.08
PRK13013		427	succinyl-diaminopimelate desuccinylase; Reviewed	99.07
PRK07907		449	hypothetical protein; Provisional	99.06
PRK08262		486	hypothetical protein; Provisional	99.05
COG1363		355	FrvX Cellulase M and related proteins [Carbohydrat	99.05
PRK13983		400	diaminopimelate aminotransferase; Provisional	99.05
TIGR01883		361	PepT-like peptidase T-like protein. This model rep	99.04
PRK15026		485	aminoacyl-histidine dipeptidase; Provisional	99.03
PRK09104		464	hypothetical protein; Validated	99.03
TIGR01880		400	Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase	99.02
PRK06446		436	hypothetical protein; Provisional	99.02
PRK05469		408	peptidase T; Provisional	99.01
PRK13007		352	succinyl-diaminopimelate desuccinylase; Reviewed	99.0
PRK06915		422	acetylornithine deacetylase; Validated	99.0
PRK06837		427	acetylornithine deacetylase; Provisional	99.0
PRK08201		456	hypothetical protein; Provisional	98.99
PRK13381		404	peptidase T; Provisional	98.99
PRK07522		385	acetylornithine deacetylase; Provisional	98.97
PRK00466		346	acetyl-lysine deacetylase; Validated	98.96
TIGR01892		364	AcOrn-deacetyl acetylornithine deacetylase (ArgE).	98.95
TIGR01882		410	peptidase-T peptidase T. This model represents a t	98.95
PRK08652		347	acetylornithine deacetylase; Provisional	98.94
PRK13009		375	succinyl-diaminopimelate desuccinylase; Reviewed	98.93
PF01546		189	Peptidase_M20: Peptidase family M20/M25/M40 This f	98.93
PRK07079		469	hypothetical protein; Provisional	98.93
PRK07318		466	dipeptidase PepV; Reviewed	98.91
PRK07205		444	hypothetical protein; Provisional	98.9
PRK05111		383	acetylornithine deacetylase; Provisional	98.88
TIGR03106		343	trio_M42_hydro hydrolase, peptidase M42 family. Th	98.87
PRK08651		394	succinyl-diaminopimelate desuccinylase; Reviewed	98.87
PRK13004		399	peptidase; Reviewed	98.83
PRK09961		344	exoaminopeptidase; Provisional	98.83
TIGR03107		350	glu_aminopep glutamyl aminopeptidase. This model r	98.82
COG0624		409	ArgE Acetylornithine deacetylase/Succinyl-diaminop	98.81
TIGR01886		466	dipeptidase dipeptidase PepV. This model represent	98.8
PRK08554		438	peptidase; Reviewed	98.8
TIGR01902		336	dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d	98.8
TIGR01891		363	amidohydrolases amidohydrolase. This model represe	98.78
KOG2275		420	consensus Aminoacylase ACY1 and related metalloexo	98.77
PRK06156		520	hypothetical protein; Provisional	98.77
TIGR01246		370	dapE_proteo succinyl-diaminopimelate desuccinylase	98.76
TIGR01900		373	dapE-gram_pos succinyl-diaminopimelate desuccinyla	98.76
PRK09864		356	putative peptidase; Provisional	98.74
TIGR03320		395	ygeY M20/DapE family protein YgeY. Members of this	98.63
TIGR01887		447	dipeptidaselike dipeptidase, putative. This model	98.63
TIGR03526		395	selenium_YgeY putative selenium metabolism hydrola	98.62
PRK08737		364	acetylornithine deacetylase; Provisional	98.5
PLN02693		437	IAA-amino acid hydrolase	98.46
PLN02280		478	IAA-amino acid hydrolase	98.45
COG4310		435	Uncharacterized protein conserved in bacteria with	98.34
COG4187		553	RocB Arginine degradation protein (predicted deacy	98.3
PF05343		292	Peptidase_M42: M42 glutamyl aminopeptidase; InterP	97.86
KOG2657		596	consensus Transmembrane glycoprotein nicastrin [Si	97.68
KOG2276		473	consensus Metalloexopeptidases [Amino acid transpo	97.3
PF04114		504	Gaa1: Gaa1-like, GPI transamidase component ; Inte	96.64
COG1473		392	AbgB Metal-dependent amidase/aminoacylase/carboxyp	95.25
COG2195		414	PepD Di- and tripeptidases [Amino acid transport a	93.6
PRK02813		428	putative aminopeptidase 2; Provisional	87.01
KOG3566		617	consensus Glycosylphosphatidylinositol anchor atta	85.29
PTZ00371		465	aspartyl aminopeptidase; Provisional	84.75

>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]	Back alignment and domain information

Probab=100.00  E-value=1.1e-133  Score=1179.39  Aligned_cols=786  Identities=31%  Similarity=0.512  Sum_probs=675.9

Q ss_pred             chhhhHHHHHHHHHHHHHHhhhhccccccCCCCCCccc--cCCCCCCHHHHHHHHHHHHhcCCCCCCCHHHH-HHHHHHH
Q 002402           41 AKRSGLAWTVAFAAFVYATYGVYYYQYEHMPPPLTADQ--AGKRGFSEFEAIKHVKALTELGPHPVGSDALD-RALQVYV  117 (927)
Q Consensus        41 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lP~~~~~~~--~~~~~fs~~rA~~~L~~L~~igpr~~GS~~n~-~a~~~yL  117 (927)
                      .+|....++..+.++....  ++.+.++++|.|++..+  ..+++|+++||++++++|+++|||++||++|| .+++ |+
T Consensus        11 ~~r~~~~~~~~~~f~~~~~--~~~~~~~~~~~pl~~~~e~~~~~~f~~~rA~~~l~~ls~~G~~~~gS~~ne~~a~~-~i   87 (834)
T KOG2194|consen   11 RKRNGAPCLAHLIFLLSIA--IVLYLFDHLPEPLTQPQEQTLPSQFSEARALKDLLSLSAAGPHPVGSDNNEMHASS-FI   87 (834)
T ss_pred             hhhccchHHHHHHHHHHHH--HHHHHHhhccccCCCcchhcCchhhHHHHHHHHHHHHHhcCCcccCchhhHHHHHH-HH
Confidence            3444444444443333333  33345566666665444  44789999999999999999999999999999 8999 99


Q ss_pred             HHHHHhhccccCCc-eeEEEEEEeccCCccccccccc--ccccccccccceEEEEEcCCCCCcCCCCEEEEEeecccccC
Q 002402          118 FAAAQKIKETKHWE-VDVEVDFFHAKSGANRLVSGAF--MGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA  194 (927)
Q Consensus       118 ~~~l~~ig~~~~~~-~~vevd~f~~~~g~~~~~g~~~--~~~~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~  194 (927)
                      ++|+++++++++.+ +++|+|.+..        +|.|  ++++.+|++++||++||.+|+  +.++.+||++|||||+++
T Consensus        88 l~e~~~i~~~~~~~~~~~Evd~q~~--------sg~~~~~~~~~~Y~~i~NIvVki~~k~--~~~~~~lLlnaHfDSvpt  157 (834)
T KOG2194|consen   88 LKEVNKIRKGSQSDLYDMEVDLQSA--------SGSFILEGMTLVYQNISNIVVKISPKN--GNDKNALLLNAHFDSVPT  157 (834)
T ss_pred             HHHHHHHHhhhhcchhhheeceeec--------cceeeehhhhheeeeeeeEEEecCCCC--CCccceeeeeccccccCC
Confidence            99999999877664 5677776553        2333  678899999999999999984  344569999999999999


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCCCCCCccceec
Q 002402          195 AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSGLFQA  274 (927)
Q Consensus       195 spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G~gG~~~lfq~  274 (927)
                      +|||+||++|||+|||++|++++..+.++|+|+|+||++||.+++|||+|++||||+++|+++||||++|+||++++||+
T Consensus       158 ~~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLea~GsGGreiLFQa  237 (834)
T KOG2194|consen  158 GPGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLEAAGSGGREILFQA  237 (834)
T ss_pred             CCCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhhhcccceecChhhhhhheEEeccccCcccceeEEec
Confidence            99999999999999999999999888889999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhcCCCCcchhhhhhccCCCCCCCchHHhhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHH
Q 002402          275 GPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLG  354 (927)
Q Consensus       275 g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g  354 (927)
                      ||++|+++.|.++++||+++++++|+||+|+|||+|||++|++++|+||+|+|+..|++.|||++|.++++.++++||+|
T Consensus       238 gp~~wl~k~Y~~~~phPf~stlgee~Fq~g~IpSdTDfrif~eyg~l~GLD~A~~~Ng~vYHTk~D~~~~i~~gs~q~tG  317 (834)
T KOG2194|consen  238 GPNHWLLKAYLQAAPHPFASTLGEELFQSGIIPSDTDFRIFREYGHLPGLDMAFVKNGYVYHTKYDGIQYIPPGSLQHTG  317 (834)
T ss_pred             CCchHHHHHHHhhCCCchhhhhHHHhhhcCcCccccchHHHHHhCCcccceeeeeeccceEEeecccccccCcchhhhhh
Confidence            99779999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCccccCCCCCCceEEeeccCceEEEEechhHHHHHHHHHHHHHHHHHHHhhccchhhHHH
Q 002402          355 ENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVS  434 (927)
Q Consensus       355 ~~vl~lv~~la~s~~l~~~~~~~~~~~~~~~~~VyFd~~G~~~v~y~~~~~~~l~~~v~~~~l~l~~~~l~~~~~~~l~~  434 (927)
                      +|++++++.++|+ ++.+      .++.+++ +||||++|++|+.|+++++++||+.+   .+.++ ....+.+.+.+.+
T Consensus       318 en~L~~v~~lan~-el~~------~~~~~~g-~vyfdv~g~~~~~y~~~~~~iLNi~i---~~~i~-l~~~~~g~~~~~~  385 (834)
T KOG2194|consen  318 ENILALVRSLANS-ELDN------STERSKG-TVYFDVVGKYFLAYSESTGVILNITI---CISIW-LMSLRSGSSQLGK  385 (834)
T ss_pred             hHHHHHHHHHhch-hhcc------ccccCCC-ceehhhhhhhhheeehhhhhhhhhhh---hhhhh-hhhhcccchhhhh
Confidence            9999999999998 5542      3455667 99999999999999999999999332   22223 3344444445889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccC
Q 002402          435 LALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQL  514 (927)
Q Consensus       435 ~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~s~~~l~igly~~p~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~  514 (927)
                      ++++|+.+++++++++++++++|++++.++ .+|+||++||+++|+|.||+++|+.++|.++...    .+     +.++
T Consensus       386 f~~~~~~~i~s~~~~~~l~~~~a~~l~~v~-l~~sw~s~p~l~~~ly~~p~~~gl~~~~~~y~~~----~~-----~~~~  455 (834)
T KOG2194|consen  386 FILACLLQILSIVVAIGLPVLVALFLDWVG-LPLSWFSNPWLLLGLYYLPSLFGLAILQALYAKR----SK-----RHSL  455 (834)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHhhccc-ccceeecchHHHHHHHHhHHHHHhhHHHHHHHhh----cc-----cccc
Confidence            999999999999999999999999999994 6999999999999999999999999999873211    11     1111


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHH
Q 002402          515 SPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLA  594 (927)
Q Consensus       515 ~~~~~~~~~~l~~~~~~~~a~~~~w~ll~~~~t~~~i~S~y~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~  594 (927)
                              ..++.+++++|+   +|++|++++|+++|||+|++++|+++|+++  ++.++..++|.++..|..+++++++
T Consensus       456 --------~~~~~~ql~~h~---~l~~l~~~~t~y~I~S~y~~~~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~~i~~~  522 (834)
T KOG2194|consen  456 --------EYLQHDQLLLHS---LLSILLIIMTYYGIRSAYLPLLLLLFYVIS--YLLNTLTILHLCGTLYLITLLICQV  522 (834)
T ss_pred             --------chhhHHHHHHHH---HHHHHHHHheecccchhHHHHHHHHHHHHH--HHHhhceeeccCCceeeeeeeeeeh
Confidence                    113556777886   788889999999999999999999999999  5577888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH
Q 002402          595 VPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSL  674 (927)
Q Consensus       595 ~P~l~~~~~~~~~~~~~~p~~gR~g~~~~~~pd~l~d~~ia~~~a~~~~l~~~~l~P~~~~~~~~~~i~~~l~~~~~~~~  674 (927)
                      .|+.+.+|.+++++.+|+|||||+|.+.  |||    .+||.++++.+.+.++|++|++|+||+++.++.+++.++.+++
T Consensus       523 ~p~~~~ay~~~~~~~~fipm~Gr~g~~~--nPd----~~i~~~~~~~~~l~~~f~i~l~~~fr~~~~i~~~l~~I~~~~~  596 (834)
T KOG2194|consen  523 GPFLFAAYSTYSLVRTFIPMMGRFGNAS--NPD----LSISFLNAFGANLIVGFLIPLVHLFRRSKSIILGLFGITAVIL  596 (834)
T ss_pred             HhHHHHHHHHHHHHHeeeccccccCCCC--Cch----HHHHHHHHHHHHhhHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Confidence            9999999999999999999999999855  997    8999999999999999999999999999999998988888888


Q ss_pred             HHHhhCCCCCCCCCC-CcceEEEEEEeccCCCCCC---CCCcceeeccccCCC--------CchHHH---HhccCCcccC
Q 002402          675 ILVLSGTVPPFSEDT-ARAVNVVHVVDASGKFGGK---QEPSSFIALYSTTPG--------KLTKEV---EQIKEGFVCG  739 (927)
Q Consensus       675 ~~~~~~~~~pf~~~~-~~r~~~~h~~~~~~~~d~~---~d~~~~~~l~~~~~~--------~l~~~~---~~c~~e~~Cg  739 (927)
                      .+++|.++|||++++ +||+.++|++|++|+++|.   +|+++++...|....        +++++.   .+|+.+++||
T Consensus       597 ~i~~T~~~fPy~~~~~~~r~~~lH~~rtf~~~~~~~~~~ds~~~i~~~D~r~~~~~~~~~~~~~~~~~~~~~~~~~~~c~  676 (834)
T KOG2194|consen  597 IIASTSIGFPYRPKTTVQRVPVLHVRRTFYDRDGTSSQNDSGYFINSQDRRGAEVLPFTKSNLTDLSSVQADCDDEMMCG  676 (834)
T ss_pred             HHHhcCCcCCccccccceeEEEEecccceecccCceeecccceeeeecccccccCCcchhhcccccccccccccccccCC
Confidence            778899999999875 5799999999999999975   788888887765432        233332   5689999999


Q ss_pred             CccccccccceeeeeeEeecCCCCcccCCCCC-------ceeeeccccccccccccCCCceEEEEEEEcCCCcEEEEEec
Q 002402          740 RDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVP-------TIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDA  812 (927)
Q Consensus       740 ~~~~~~f~~~p~y~~~~~~~~~~~~Wlp~~~p-------~l~~~s~~~~~~~~~~~~~~~~~r~~f~~~g~~~~sl~i~p  812 (927)
                      +         |+|+  |.+.+.+++|+|+++|       .+.+++|        +..++++.|++|++.|++||++||+|
T Consensus       677 ~---------p~y~--w~~~~~~~~~vp~~~~v~~~~~~~l~l~sk--------~~~~~~~~r~~~~i~~~d~~s~~i~p  737 (834)
T KOG2194|consen  677 M---------PVYN--WIKPREQSLWVPNPEPVIGPYPPNLKLLSK--------TSLDNGNLRYEFSITGTDHISLFISP  737 (834)
T ss_pred             c---------eeee--ccccCccceEecCCccccCCCCceEEEeec--------cccCCCceEEEEEEeccCceEEEEEe
Confidence            9         8998  9999999999999876       4556666        44557789999999999999999999


Q ss_pred             ---eeecceeeecCCcccccCCCCCCCCCcEEEEEEcC-CCCceEEEEEEEeccCCcccccccccccCCCceEEEe----
Q 002402          813 ---EEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGG-KNAVSKFDLDLYWAKNSTESYHNANRKEKQRPLLKLR----  884 (927)
Q Consensus       813 ---~~i~~wSf~~~~~~~~~~~~~~~~~~~~~i~~s~G-~~~P~~F~l~l~~~~~~~~~~~~~~~~~~~~p~~~l~----  884 (927)
                         +++.+|||.+.   +  ..+  + ..+|+||++|| ++.|++||||+++.           ++.+++| +|++    
T Consensus       738 ~~d~~~~~wsf~~~---~--~~~--~-~~~~~i~~~yg~~~~p~~F~lel~~~-----------~~~~~v~-~k~~~~~h  797 (834)
T KOG2194|consen  738 LNDVKVLDWSFTTS---P--LTE--N-KTPYHIYFSYGLDSTPLNFWLELEKE-----------EGVTDVP-FKLGVSAH  797 (834)
T ss_pred             cCCceEEEEeccCC---c--ccc--c-CCceEEEEEeecCCCCceEEEEEeec-----------cCccCCc-eEEeeeee
Confidence               59999999644   3  333  2 22699999999 89999999999998           5578888 8888    


Q ss_pred             --ccccCCCHHHHHHHhcCCCccccccCCCCcccccc
Q 002402          885 --TDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSF  919 (927)
Q Consensus       885 --~~~~~~t~~~~~~l~~fP~wa~~~gk~~~p~~l~~  919 (927)
                        +|.+++||++++|+++||+||..++|++|+....|
T Consensus       798 ~~~~~~~~t~~~~~~~~~lP~~~~~~~~~~~~~~~~~  834 (834)
T KOG2194|consen  798 YIHDLELITPEYKEFLETLPSWAATVDWSTSYESWIF  834 (834)
T ss_pred             eccchhhcCHHHHHHHHhCCchhhccccccchhheeC
Confidence              47889999999999999999999999999987654

>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional	Back alignment and domain information

>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families	Back alignment and domain information

>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]	Back alignment and domain information

>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG2234 Iap Predicted aminopeptidases [General function prediction only]	Back alignment and domain information

>TIGR03176 AllC allantoate amidohydrolase	Back alignment and domain information

>PRK12890 allantoate amidohydrolase; Reviewed	Back alignment and domain information

>PRK12891 allantoate amidohydrolase; Reviewed	Back alignment and domain information

>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family	Back alignment and domain information

>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional	Back alignment and domain information

>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional	Back alignment and domain information

>PRK09290 allantoate amidohydrolase; Reviewed	Back alignment and domain information

>PRK09133 hypothetical protein; Provisional	Back alignment and domain information

>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch	Back alignment and domain information

>PRK12892 allantoate amidohydrolase; Reviewed	Back alignment and domain information

>PRK12893 allantoate amidohydrolase; Reviewed	Back alignment and domain information

>PRK06133 glutamate carboxypeptidase; Reviewed	Back alignment and domain information

>PRK08596 acetylornithine deacetylase; Validated	Back alignment and domain information

>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase	Back alignment and domain information

>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed	Back alignment and domain information

>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]	Back alignment and domain information

>PRK07473 carboxypeptidase; Provisional	Back alignment and domain information

>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis	Back alignment and domain information

>PRK07906 hypothetical protein; Provisional	Back alignment and domain information

>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase	Back alignment and domain information

>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]	Back alignment and domain information

>PRK07338 hypothetical protein; Provisional	Back alignment and domain information

>PRK04443 acetyl-lysine deacetylase; Provisional	Back alignment and domain information

>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed	Back alignment and domain information

>PRK07907 hypothetical protein; Provisional	Back alignment and domain information

>PRK08262 hypothetical protein; Provisional	Back alignment and domain information

>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK13983 diaminopimelate aminotransferase; Provisional	Back alignment and domain information

>TIGR01883 PepT-like peptidase T-like protein	Back alignment and domain information

>PRK15026 aminoacyl-histidine dipeptidase; Provisional	Back alignment and domain information

>PRK09104 hypothetical protein; Validated	Back alignment and domain information

>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase	Back alignment and domain information

>PRK06446 hypothetical protein; Provisional	Back alignment and domain information

>PRK05469 peptidase T; Provisional	Back alignment and domain information

>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed	Back alignment and domain information

>PRK06915 acetylornithine deacetylase; Validated	Back alignment and domain information

>PRK06837 acetylornithine deacetylase; Provisional	Back alignment and domain information

>PRK08201 hypothetical protein; Provisional	Back alignment and domain information

>PRK13381 peptidase T; Provisional	Back alignment and domain information

>PRK07522 acetylornithine deacetylase; Provisional	Back alignment and domain information

>PRK00466 acetyl-lysine deacetylase; Validated	Back alignment and domain information

>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE)	Back alignment and domain information

>TIGR01882 peptidase-T peptidase T	Back alignment and domain information

>PRK08652 acetylornithine deacetylase; Provisional	Back alignment and domain information

>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed	Back alignment and domain information

>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families	Back alignment and domain information

>PRK07079 hypothetical protein; Provisional	Back alignment and domain information

>PRK07318 dipeptidase PepV; Reviewed	Back alignment and domain information

>PRK07205 hypothetical protein; Provisional	Back alignment and domain information

>PRK05111 acetylornithine deacetylase; Provisional	Back alignment and domain information

>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family	Back alignment and domain information

>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed	Back alignment and domain information

>PRK13004 peptidase; Reviewed	Back alignment and domain information

>PRK09961 exoaminopeptidase; Provisional	Back alignment and domain information

>TIGR03107 glu_aminopep glutamyl aminopeptidase	Back alignment and domain information

>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR01886 dipeptidase dipeptidase PepV	Back alignment and domain information

>PRK08554 peptidase; Reviewed	Back alignment and domain information

>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase	Back alignment and domain information

>TIGR01891 amidohydrolases amidohydrolase	Back alignment and domain information

>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]	Back alignment and domain information

>PRK06156 hypothetical protein; Provisional	Back alignment and domain information

>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade	Back alignment and domain information

>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase	Back alignment and domain information

>PRK09864 putative peptidase; Provisional	Back alignment and domain information

>TIGR03320 ygeY M20/DapE family protein YgeY	Back alignment and domain information

>TIGR01887 dipeptidaselike dipeptidase, putative	Back alignment and domain information

>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase	Back alignment and domain information

>PRK08737 acetylornithine deacetylase; Provisional	Back alignment and domain information

>PLN02693 IAA-amino acid hydrolase	Back alignment and domain information

>PLN02280 IAA-amino acid hydrolase	Back alignment and domain information

>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only]	Back alignment and domain information

>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]	Back alignment and domain information

>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families	Back alignment and domain information

>KOG2657 consensus Transmembrane glycoprotein nicastrin [Signal transduction mechanisms; Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]	Back alignment and domain information

>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins	Back alignment and domain information

>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]	Back alignment and domain information

>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]	Back alignment and domain information

>PRK02813 putative aminopeptidase 2; Provisional	Back alignment and domain information

>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PTZ00371 aspartyl aminopeptidase; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		927
2ek8_A		421	Aminopeptidase From Aneurinibacillus Sp. Strain Am-		1e-04

>pdb|2EK8|A Chain A, Aminopeptidase From Aneurinibacillus Sp. Strain Am-1 Length = 421

Back alignment and structure

Iteration: 1

Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 25/217 (11%) Query: 164 NHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFK 223 ++++ +P + + I++ SH D+V A GA D +S VAV LELAR MS+ Sbjct: 204 HNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKLK--TD 261 Query: 224 NAVIFLFNTGEEEGLNGAHSF---VTQHPWSTTIRV-AIDLEAMGIGGKSGLFQAGPHPW 279 + F+ EE GL G+ + +++ TI + +D+ G ++ Sbjct: 262 TELRFITFGAEENGLIGSKKYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKN 321 Query: 280 AVENFAAAAK------YPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSA 333 V + AAA P GQ D + A+ G+ F + Sbjct: 322 RVTDLGAAASSRLSGVLPYGQEGRSDHESFHAL-------------GIPAALFIHAPVEP 368 Query: 334 VYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSL 370 YHT ND LD + L ++ + + + + QAA L Sbjct: 369 WYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGEL 405

PyMOL of 2ek8

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		927
3gux_A		314	Putative Zn-dependent exopeptidase; aminopeptidase	1e-26
3tc8_A		309	Leucine aminopeptidase; phosphorylase/hydrolase-li	4e-26
1tkj_A		284	Aminopeptidase, SGAP; double-zinc metalloproteinas	3e-18
2ek8_A		421	Aminopeptidase; metalloproteinase, hydrolase; 1.80	7e-17
3pb6_X		330	Glutaminyl-peptide cyclotransferase-like protein;	1e-16
1rtq_A		299	Bacterial leucyl aminopeptidase; bimetallic, zinc,	1e-14
3kas_A		640	Transferrin receptor protein 1; transferrin recept	3e-14
3iib_A		444	Peptidase M28; YP_926796.1, structural genomics, J	5e-14
2afw_A		329	Glutaminyl-peptide cyclotransferase; alpha-beta pr	6e-14
3fed_A		707	Glutamate carboxypeptidase III; metallopeptidase,	2e-11
1cg2_A		393	Carboxypeptidase G2; metallocarboxypeptidase, hydr	1e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05
3ct9_A		356	Acetylornithine deacetylase; NP_812461.1, A putati	5e-05
3gb0_A		373	Peptidase T; NP_980509.1, aminopeptidase PEPT, pep	7e-05
3rza_A		396	Tripeptidase; phosphorylase/hydrolase-like, struct	7e-05
1q7l_A		198	Aminoacylase-1; catalysis, enzyme dimerization, si	1e-04
3tx8_A		369	Succinyl-diaminopimelate desuccinylase; peptidase,	1e-04

>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Length = 314	Back alignment and structure

 Score =  110 bits (276), Expect = 1e-26
 Identities = 48/314 (15%), Positives = 105/314 (33%), Gaps = 63/314 (20%)

Query: 84  FSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKS 143
           F    A ++++   + GP    + A     + Y+        + + +   V   +    +
Sbjct: 24  FDADSAYQYIQVQADFGPRVPNTQAHKECGE-YL------AGQLEKFGAKVYNQYADLIA 76

Query: 144 GANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAE------- 196
               ++               +I+   +P+     ++  IL+ +H D+   A+       
Sbjct: 77  YDGTILKS------------RNIIGAYKPE-----SKKRILLCAHWDSRPYADNDPDPKN 119

Query: 197 ------GAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLN----------- 239
                 G  D +S V V+LE+AR + +        +  +F   E+ G+            
Sbjct: 120 HHTPILGVNDGASGVGVLLEIARQIQKEQP--ALGIDIVFFDSEDYGIPEFYDGKYKQDT 177

Query: 240 ---GAHSFV-TQHPWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAK-YPSGQ 294
              G+  +  T H  +   R  I L+ +G    +  ++      A        K      
Sbjct: 178 WCLGSQYWARTPHVQNYNARYGILLDMVGGKDATFYYEGYSARTARSEMKKIWKKAHELG 237

Query: 295 VTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKS-------AVYHTKNDKLDLLKP 347
                +   G  T      V K  A +  +D    D         + +HT ND ++ +  
Sbjct: 238 YGKYFVKEDGGETVDDHIYVNKL-ARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDR 296

Query: 348 GSLQHLGENMLAFL 361
            +L+ +G+ ++  +
Sbjct: 297 NTLKAVGQTVMDVI 310

PyMOL of 3gux

>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Length = 309	Back alignment and structure

>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Length = 284	Back alignment and structure

>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Length = 421	Back alignment and structure

>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Length = 330	Back alignment and structure

>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Length = 299	Back alignment and structure

>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Length = 640	Back alignment and structure

>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Length = 444	Back alignment and structure

>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Length = 329	Back alignment and structure

>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Length = 707	Back alignment and structure

>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356	Back alignment and structure

>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Length = 373	Back alignment and structure

>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396	Back alignment and structure

>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 198	Back alignment and structure

>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Length = 369	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		927
4fuu_A		309	Leucine aminopeptidase; phosphorylase/hydrolase li	100.0
4f9u_A		312	CG32412; alpha/beta hydrolase, PGlu formation, PE,	100.0
3tc8_A		309	Leucine aminopeptidase; phosphorylase/hydrolase-li	100.0
4fai_A		330	CG5976, isoform B; alpha/beta hydrolase, PGlu form	100.0
3gux_A		314	Putative Zn-dependent exopeptidase; aminopeptidase	100.0
3pb6_X		330	Glutaminyl-peptide cyclotransferase-like protein;	100.0
2afw_A		329	Glutaminyl-peptide cyclotransferase; alpha-beta pr	100.0
1tkj_A		284	Aminopeptidase, SGAP; double-zinc metalloproteinas	99.98
3kas_A		640	Transferrin receptor protein 1; transferrin recept	99.97
1rtq_A		299	Bacterial leucyl aminopeptidase; bimetallic, zinc,	99.97
3fed_A		707	Glutamate carboxypeptidase III; metallopeptidase,	99.96
2ek8_A		421	Aminopeptidase; metalloproteinase, hydrolase; 1.80	99.95
3iib_A		444	Peptidase M28; YP_926796.1, structural genomics, J	99.94
3k9t_A		435	Putative peptidase; structural genomics, joint cen	99.84
4h2k_A		269	Succinyl-diaminopimelate desuccinylase; DAPE, MCSG	99.69
3t68_A		268	Succinyl-diaminopimelate desuccinylase; DAPE, csgi	99.68
1vhe_A		373	Aminopeptidase/glucanase homolog; structural genom	99.58
1q7l_A		198	Aminoacylase-1; catalysis, enzyme dimerization, si	99.57
1y0y_A		353	FRV operon protein FRVX; aminopeptidase, PDZ, hydr	99.57
2wyr_A		332	Cobalt-activated peptidase TET1; hydrolase, large	99.54
2gre_A		349	Deblocking aminopeptidase; structural genomi prote	99.53
2fvg_A		340	Endoglucanase; TM1049, structural genomics, joint	99.46
3n5f_A		408	L-carbamoylase, N-carbamoyl-L-amino acid hydrolase	99.42
2zog_A		479	Cytosolic non-specific dipeptidase; metallopeptida	99.37
1cg2_A		393	Carboxypeptidase G2; metallocarboxypeptidase, hydr	99.33
3ct9_A		356	Acetylornithine deacetylase; NP_812461.1, A putati	99.27
3ife_A		434	Peptidase T; metallopeptidase, aminopeptidase, hyd	99.25
3pfo_A		433	Putative acetylornithine deacetylase; metal bindin	99.25
2pok_A		481	Peptidase, M20/M25/M40 family; M20 family peptidas	99.24
3dlj_A		485	Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti	99.21
2v8h_A		474	Beta-alanine synthase; amidohydrolase, alpha and b	99.21
3gb0_A		373	Peptidase T; NP_980509.1, aminopeptidase PEPT, pep	99.21
1vho_A		346	Endoglucanase; structural genomics, unknown functi	99.18
1z2l_A		423	Allantoate amidohydrolase; ALLC, purine cataboli a	99.18
2rb7_A		364	Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat	99.17
3tx8_A		369	Succinyl-diaminopimelate desuccinylase; peptidase,	99.15
1ylo_A		348	Hypothetical protein SF2450; structural genomics,	99.14
3rza_A		396	Tripeptidase; phosphorylase/hydrolase-like, struct	99.1
1vgy_A		393	Succinyl-diaminopimelate desuccinylase; structural	99.1
1lfw_A		470	PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac	99.09
3kl9_A		355	PEPA, glutamyl aminopeptidase; tetrahedral aminope	99.08
1fno_A		417	Peptidase T; metallo peptidase, protease, hydrolas	99.07
3mru_A		490	Aminoacyl-histidine dipeptidase; metalloprotease,	99.06
3isz_A		377	Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b	99.04
3khx_A		492	Putative dipeptidase sacol1801; DAPE, metallopepti	99.01
3pfe_A		472	Succinyl-diaminopimelate desuccinylase; metal bind	99.0
3cpx_A		321	Aminopeptidase, M42 family; YP_676701.1, putative	99.0
1xmb_A		418	IAA-amino acid hydrolase homolog 2; structural gen	99.0
2qyv_A		487	XAA-His dipeptidase; YP_718209.1, structural genom	98.96
2f7v_A		369	Aectylcitrulline deacetylase; alpha/beta, hydrolas	98.92
1ysj_A		404	Protein YXEP; M20 family peptidase, dinuclear meta	98.91
2vpu_A		354	TET3, 354AA long hypothetical operon protein FRV;	98.86
3ram_A		394	HMRA protein; two-domain, catalytic (alpha-beta-al	98.82
3isx_A		343	Endoglucanase; TM1050, structural genomics, joint	98.62
3io1_A		445	Aminobenzoyl-glutamate utilization protein; peptid	98.6
2wzn_A		354	TET3, 354AA long hypothetical operon protein FRV;	98.13
3iib_A		444	Peptidase M28; YP_926796.1, structural genomics, J	94.45
2ijz_A		428	Probable M18-family aminopeptidase 2; putative ami	91.01
2glf_A		450	Probable M18-family aminopeptidase 1; putative, NY	89.92
3fed_A		707	Glutamate carboxypeptidase III; metallopeptidase,	88.9
3kas_A		640	Transferrin receptor protein 1; transferrin recept	82.79

>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}	Back alignment and structure

Probab=100.00  E-value=1.8e-40  Score=365.89  Aligned_cols=253  Identities=20%  Similarity=0.209  Sum_probs=198.6

Q ss_pred             CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccc
Q 002402           82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS  161 (927)
Q Consensus        82 ~~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~  161 (927)
                      .+||++||+++|++|+++|||++||++++++++ ||+++|+++|      .+++.|.|.....            ...+.
T Consensus        20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~-~i~~~l~~~g------~~v~~q~~~~~~~------------~~~~~   80 (309)
T 4fuu_A           20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGN-YLAGKLEAFG------AKVTNQYADLIAY------------DGTLL   80 (309)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHH-HHHHHHHHTT------CEEEEEEEEEECT------------TSCEE
T ss_pred             CccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHH-HHHHHHHHcC------CeeEEEeEEeccC------------CCCcc
Confidence            479999999999999999999999999999999 9999999998      5777776654210            11224


Q ss_pred             ccceEEEEEcCCCCCcCCCCEEEEEeecccccCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 002402          162 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIF  228 (927)
Q Consensus       162 ~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s-------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvF  228 (927)
                      +..|||++++|+     .++.|+|+|||||++.+             +||+||+||||+|||+||.|++.  +++++|+|
T Consensus        81 ~~~Nii~~~~g~-----~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~  153 (309)
T 4fuu_A           81 KARNIIGSYKPE-----SKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDI  153 (309)
T ss_dssp             EEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred             eeEEEEEEECCC-----CCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEE
Confidence            678999999985     45789999999998753             69999999999999999999974  68999999


Q ss_pred             EEeCCCCCCc--------------cchHHHHhcCC-ccCCceEEEEeccCCCCCCccceecCCC---HHHHHHHHHHhcC
Q 002402          229 LFNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAIDLEAMGIGGKSGLFQAGPH---PWAVENFAAAAKY  290 (927)
Q Consensus       229 lf~~aEE~Gl--------------~GS~~fv~~h~-~~~~i~a~INLD~~G~gG~~~lfq~g~~---~~li~~y~~~a~~  290 (927)
                      +||+|||.|+              +||+.|+++++ +..++.++||+||+|.+++....+....   +.+.+.+.+.++.
T Consensus       154 ~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (309)
T 4fuu_A          154 IFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKK  233 (309)
T ss_dssp             EEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHH
T ss_pred             EeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHh
Confidence            9999999995              89999997764 4578999999999998877654442221   3344444443222


Q ss_pred             CCCcchhhhhhccCCCCCCCchHHhhhcCCCeEEEEEeeC----CCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHH
Q 002402          291 PSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTD----KSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ  363 (927)
Q Consensus       291 p~~~~l~~e~f~~g~ips~TD~~~F~~~~GIPgld~a~~~----~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~  363 (927)
                      .....  ....+.+. ...+||.+|.+.+|||++++++..    ..++|||+.||+|+||+++||++|+++++++.+
T Consensus       234 ~~~~~--~~~~~~~~-~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~  307 (309)
T 4fuu_A          234 AGYGK--TFIDERGD-TITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN  307 (309)
T ss_dssp             TTCTT--TEEEEECC-CCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred             cCCcc--cccccCCC-CCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHhh
Confidence            11110  01112222 235799999876899999997643    245899999999999999999999999999864

PyMOL of 4fuu

>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*	Back alignment and structure

>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}	Back alignment and structure

>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*	Back alignment and structure

>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}	Back alignment and structure

>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*	Back alignment and structure

>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...	Back alignment and structure

>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A	Back alignment and structure

>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A	Back alignment and structure

>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...	Back alignment and structure

>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...	Back alignment and structure

>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*	Back alignment and structure

>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}	Back alignment and structure

>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}	Back alignment and structure

>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}	Back alignment and structure

>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A	Back alignment and structure

>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4	Back alignment and structure

>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4	Back alignment and structure

>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A	Back alignment and structure

>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A	Back alignment and structure

>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4	Back alignment and structure

>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4	Back alignment and structure

>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}	Back alignment and structure

>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*	Back alignment and structure

>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1	Back alignment and structure

>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}	Back alignment and structure

>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}	Back alignment and structure

>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}	Back alignment and structure

>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}	Back alignment and structure

>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}	Back alignment and structure

>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A	Back alignment and structure

>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}	Back alignment and structure

>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4	Back alignment and structure

>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A	Back alignment and structure

>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}	Back alignment and structure

>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}	Back alignment and structure

>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4	Back alignment and structure

>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}	Back alignment and structure

>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1	Back alignment and structure

>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1	Back alignment and structure

>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}	Back alignment and structure

>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A	Back alignment and structure

>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}	Back alignment and structure

>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A	Back alignment and structure

>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A	Back alignment and structure

>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}	Back alignment and structure

>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}	Back alignment and structure

>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A	Back alignment and structure

>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}	Back alignment and structure

>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A	Back alignment and structure

>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1	Back alignment and structure

>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}	Back alignment and structure

>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}	Back alignment and structure

>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}	Back alignment and structure

>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A	Back alignment and structure

>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}	Back alignment and structure

>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}	Back alignment and structure

>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}	Back alignment and structure

>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...	Back alignment and structure

>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		927
d2afwa1		329	c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransf	2e-23
d3bi1a3		304	c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypep	5e-22
d1de4c3		294	c.56.5.5 (C:122-189,C:383-608) Transferrin recepto	2e-19
d1rtqa_		291	c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolyti	5e-19
d1tkja1		277	c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces gr	8e-08
d2grea2		233	c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid	3e-05
d1cg2a1		276	c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2,	8e-05
d1fnoa4		295	c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripepti	1e-04
g1q7l.1		280	c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain	6e-04
d1lfwa1		272	c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {	0.003

>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Length = 329	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Glutaminyl-peptide cyclotransferase-like
domain: Glutaminyl-peptide cyclotransferase, QPCT
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 2e-23
 Identities = 52/345 (15%), Positives = 113/345 (32%), Gaps = 74/345 (21%)

Query: 66  QYEHMPPPLTADQAGKRGFSEFEAIKHVKALTE--LGPHPVGSDALDRALQVYVFAAAQK 123
           +  H P  L +    ++        +  +   +  L     GS     A Q ++    Q+
Sbjct: 8   KNYHQPAILNSSAL-RQIAEGTSISEMWQNDLQPLLIERYPGSPGSYAARQ-HIMQRIQR 65

Query: 124 IKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAI 183
           ++     +  +E+D F +++                Y   ++I+  + P      A+  +
Sbjct: 66  LQ----ADWVLEIDTFLSQTPYG-------------YRSFSNIISTLNPT-----AKRHL 103

Query: 184 LVSSHIDTVFAAE-------GAGDCSSCVAVMLELARAMSQW--------AHGFKNAVIF 228
           +++ H D+ + +        GA D +   A+MLELARA+ +               ++  
Sbjct: 104 VLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQL 163

Query: 229 LFNTGEEEG--------LNGAHSFVTQHPWS------------TTIRVAIDLEAMGIGGK 268
           +F  GEE          L G+     +   +              + + + L+ +G    
Sbjct: 164 IFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNP 223

Query: 269 SGLFQAGPHPWAVE----------NFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEV 318
           +            E                 +       Q+    G I    D   +   
Sbjct: 224 TFPNFFPNSARWFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQD--DHIPFLR- 280

Query: 319 AGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 363
            G+  L    +    V+HT +D  + L   ++ +L + +  F+L+
Sbjct: 281 RGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLE 325

PyMOL of d2afwa1

>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Length = 304	Back information, alignment and structure

>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 294	Back information, alignment and structure

>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Length = 291	Back information, alignment and structure

>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Length = 277	Back information, alignment and structure

>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233	Back information, alignment and structure

>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 276	Back information, alignment and structure

>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Length = 295	Back information, alignment and structure

>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 272	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		927
d1tkja1		277	Aminopeptidase {Streptomyces griseus [TaxId: 1911]	100.0
d1rtqa_		291	Aminopeptidase {Aeromonas proteolytica [TaxId: 671	100.0
d2afwa1		329	Glutaminyl-peptide cyclotransferase, QPCT {Human (	100.0
d1de4c3		294	Transferrin receptor ectodomain, protease-like dom	100.0
d3bi1a3		304	Glutamate carboxypeptidase II FOLH1 {Human (Homo s	100.0
d1vhoa2		248	Putative endoglucanase TM1048, catalytic domain {T	99.78
d1yloa2		264	Aminopeptidase YpdE {Shigella flexneri [TaxId: 623	99.76
g1q7l.1		280	Aminoacylase-1, catalytic domain {Human (Homo sapi	99.74
d1cg2a1		276	Carboxypeptidase G2, catalytic domain {Pseudomonas	99.73
d1vhea2		275	Hypothetical protein YsdC, catalytic domain {Bacil	99.71
d2fvga2		255	Endoglucanase TM1049 {Thermotoga maritima [TaxId:	99.68
d1z2la1		293	Allantoate amidohydrolase AllC catalytic domain {E	99.65
d1fnoa4		295	Peptidase T (tripeptidase), catalytic domain {Salm	99.63
d2grea2		233	Deblocking aminopeptidase YhfE {Bacillus cereus [T	99.62
d1r3na1		322	Peptidase-like beta-alanine synthase, catalytic do	99.48
d1vgya1		262	Succinyl-diaminopimelate desuccinylase, catalytic	99.23
d1lfwa1		272	Aminopeptidase PepV {Lactobacillus delbrueckii [Ta	99.1
d1y0ya2		255	Frv operon protein FrvX, catalytic domain {Pyrococ	98.22
d1xmba1		273	IAA-amino acid hydrolase, catalytic domain {Mouse-	98.12
d1ysja1		261	Protein YxeP {Bacillus subtilis [TaxId: 1423]}	98.02
d1y0ya2		255	Frv operon protein FrvX, catalytic domain {Pyrococ	90.82
d1y7ea2		322	Probable aminopeptidase ApeA {Borrelia burgdorferi	90.12

>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Aminopeptidase
species: Streptomyces griseus [TaxId: 1911]

Probab=100.00  E-value=1.9e-37  Score=334.32  Aligned_cols=247  Identities=17%  Similarity=0.217  Sum_probs=202.4

Q ss_pred             CCCCHHHHHHHHHHHHh-----cCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccc
Q 002402           82 RGFSEFEAIKHVKALTE-----LGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGR  156 (927)
Q Consensus        82 ~~fs~~rA~~~L~~L~~-----igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~  156 (927)
                      .+++.+++++||.+|+.     .|+|..||++++++++ ||.++|+++|      +++++|.|..+.             
T Consensus         2 p~i~~~~~~~~l~~l~~~~~~~~g~R~~gs~~~~~a~~-yi~~~l~~~G------~~~~~~~~~~~~-------------   61 (277)
T d1tkja1           2 PDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVD-YVKAKLDAAG------YTTTLQQFTSGG-------------   61 (277)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHH-HHHHHHHHHT------CEEEEEEEEETT-------------
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCCCCCCCHHHHHHHH-HHHHHHHHCC------CeEEEEeeeccC-------------
Confidence            37999999999999974     5899999999999999 9999999999      678887765420             


Q ss_pred             cccccccceEEEEEcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC
Q 002402          157 TLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEE  236 (927)
Q Consensus       157 ~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~  236 (927)
                          .+..|||++++|+    .+++.|+++|||||++.++||+||++|||+|||++|.|++.+.+|+++|+|+|+++||.
T Consensus        62 ----~~~~Nvi~~~~g~----~~~~~i~~~aH~D~~~~~~Ga~D~~sgva~~le~ar~l~~~~~~~~~~i~~~~~~~EE~  133 (277)
T d1tkja1          62 ----ATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEEL  133 (277)
T ss_dssp             ----EEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG
T ss_pred             ----ccccCeEEEECCC----CCCCEEEEEccccccccccccCCCccchHHHHHHHHHHHhhcCCCCcceEEeecccccc
Confidence                2457999999985    35689999999999999999999999999999999999998888999999999999999


Q ss_pred             CccchHHHHhcCCcc--CCceEEEEeccCCCCCCccceecCCCHHHHHHHHHHh---cCCCCcchhhhhhccCCCCCCCc
Q 002402          237 GLNGAHSFVTQHPWS--TTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAA---KYPSGQVTAQDLFASGAITSATD  311 (927)
Q Consensus       237 Gl~GS~~fv~~h~~~--~~i~a~INLD~~G~gG~~~lfq~g~~~~li~~y~~~a---~~p~~~~l~~e~f~~g~ips~TD  311 (927)
                      |+.||++|+++|++.  +++.++||+||+|.+++..+.+ ..++.+.+.+.+..   ..+..      ...  .....||
T Consensus       134 g~~Gs~~~~~~~~~~~~~~i~~~inlD~vG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~SD  204 (277)
T d1tkja1         134 GLIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFKNYFAGLNVPTE------IET--EGDGRSD  204 (277)
T ss_dssp             TSHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHHHHHHHHTCCCE------ECC--SSTTCST
T ss_pred             cccccHHHHHHhhccchhheeeeeccccccCCCCceEEe-cCChHHHHHHHHHHHhcCCCcc------ccc--CCCCCcc
Confidence            999999999999863  7899999999999877765444 23444444443321   22211      111  1124699


Q ss_pred             hHHhhhcCCCeEEEEEeeC-------------------CCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhc
Q 002402          312 FQVYKEVAGLSGLDFAYTD-------------------KSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS  366 (927)
Q Consensus       312 ~~~F~~~~GIPgld~a~~~-------------------~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~  366 (927)
                      |.+|.+ .|||.+.+....                   ...+|||+.||+|+++++.|+++++.+..++..|||
T Consensus       205 h~~F~~-~GIP~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~YHt~~Dt~d~l~~~~l~~~~~~v~~~v~~LAn  277 (277)
T d1tkja1         205 HAPFKN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSS  277 (277)
T ss_dssp             HHHHHH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             chhHHH-CCCCEEEeecCCccccchhhhhhccccccccCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhC
Confidence            999999 899999874211                   124699999999999999999999999999999986

PyMOL of d1tkja1

>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]}	Back information, alignment and structure

>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]}	Back information, alignment and structure

>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]}	Back information, alignment and structure

>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]}	Back information, alignment and structure

>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}	Back information, alignment and structure

>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]}	Back information, alignment and structure

>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]}	Back information, alignment and structure