Citrus Sinensis ID: 002417
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 926 | 2.2.26 [Sep-21-2011] | |||||||
| Q9CAG3 | 917 | Lipoxygenase 6, choloropl | yes | no | 0.981 | 0.991 | 0.640 | 0.0 | |
| O24371 | 914 | Linoleate 13S-lipoxygenas | N/A | no | 0.896 | 0.908 | 0.588 | 0.0 | |
| Q9FNX8 | 926 | Lipoxygenase 4, chloropla | no | no | 0.944 | 0.944 | 0.538 | 0.0 | |
| Q9LNR3 | 919 | Lipoxygenase 3, chloropla | no | no | 0.898 | 0.905 | 0.554 | 0.0 | |
| Q8H016 | 918 | Probable lipoxygenase 6 O | yes | no | 0.900 | 0.908 | 0.534 | 0.0 | |
| Q7XV13 | 899 | Putative lipoxygenase 5 O | no | no | 0.883 | 0.909 | 0.520 | 0.0 | |
| O24370 | 899 | Linoleate 13S-lipoxygenas | N/A | no | 0.894 | 0.921 | 0.509 | 0.0 | |
| Q8GSM2 | 896 | Lipoxygenase 2.3, chlorop | N/A | no | 0.894 | 0.924 | 0.487 | 0.0 | |
| Q84YK8 | 941 | Probable lipoxygenase 8, | no | no | 0.856 | 0.842 | 0.507 | 0.0 | |
| P38419 | 924 | Lipoxygenase 7, chloropla | no | no | 0.857 | 0.859 | 0.504 | 0.0 |
| >sp|Q9CAG3|LOX6_ARATH Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1189 bits (3075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/932 (64%), Positives = 715/932 (76%), Gaps = 23/932 (2%)
Query: 1 MSSALKTQLLTGPALRRVPAIPGAVSNGNLRPARVSKSKFCPIRAVVNSDQNKA-TEAAT 59
++S +KT G +L + PA A+S +S+ +RAV++ ++ E
Sbjct: 3 VASPVKTNF-NGVSLVKSPAF-SALSCRKQHRVPISRQ----VRAVISREEKAVDQEDGK 56
Query: 60 KSVDAKDVNGSLLVSSSSSKEGLVDVRAVITIRKKLKEKLTEKIEDQWELFVNGIGQGIM 119
KS + +N S S G V AV+ IRKK+KEKLTE+ E Q ELF+ IGQG++
Sbjct: 57 KSTNKPLINSSQFPWQRSKYTGSKTVTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGML 116
Query: 120 IQLISEDIDPVTNSG-KSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILIT 178
IQL+SE+IDP T G KS+ES V G LPK V +F A+F VP +FG PGAIL+T
Sbjct: 117 IQLVSEEIDPETGKGRKSLESPVMG-LPKAVKDPRYLVFT--ADFTVPINFGKPGAILVT 173
Query: 179 NLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDL 238
NL E L EI++ + FPANTWIHS+ DN ++RIIF++Q LPS+TP GIK+L
Sbjct: 174 NLLSTEICLSEIIIED-STDTILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKEL 232
Query: 239 RREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGR 298
R +DL+S+RG+GKGERK HERIYDY VYNDLG+P K + + RPVL E PYPRRCRTGR
Sbjct: 233 REKDLVSVRGDGKGERKPHERIYDYDVYNDLGDPRKTERV-RPVLGVPETPYPRRCRTGR 291
Query: 299 PPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDI 358
P DP CESR ++ YVPRDE FEEIK++TF +GR KA+ HNL+PSIAA+LS+ DI
Sbjct: 292 PLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDI 351
Query: 359 PFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRF 418
PFTCFSDID LY S +L + ++ F+ + LNV + L KY+TPAVI+ DRF
Sbjct: 352 PFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGILNVTETLLKYDTPAVIKWDRF 411
Query: 419 AWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL--HGLS 476
AWLRDNEF RQ LAGVNPVNIE LKE PI S LDPA+YGP ES +T+E+I E+ +G +
Sbjct: 412 AWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREVEHYGTT 471
Query: 477 VEKAIEEKRLFILDYHDLLLPFIEKINSLPD--RKTYASRTVFFYNKAGMLRPLAIELSL 534
+EKA+EEKRLF++DYHD+LLPF+EKINS+ + RKTYASRT+FFY+K G LRPLAIELSL
Sbjct: 472 IEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIFFYSKNGALRPLAIELSL 531
Query: 535 PPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIAT 594
PP+ S +NK +YTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWL THASMEPYIIAT
Sbjct: 532 PPTAES-ENKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIAT 590
Query: 595 HRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSF 654
+RQLS+MHP+YKLLHPHMRYTLEINA AR+SLINGGGIIE+ F+PG+YAMELSSAAYKS
Sbjct: 591 NRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSM 650
Query: 655 WRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESY 714
WRFDME LPADL+R RGMAEED S GVRLVI+DYPYAADGLLIW AIK+ VESY
Sbjct: 651 WRFDMEGLPADLVR-----RGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESY 705
Query: 715 VAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASG 774
V HFYS+ S+TSD+ELQAWW EIKNKGH+DK++E WWPKL T +DLS I+T MIW ASG
Sbjct: 706 VKHFYSDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASG 765
Query: 775 QHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVM 834
QHAAINFGQYPFGGYVPNRPTL+RKL+PQE DP YE F+ NPQ++FL SLPTQLQATKVM
Sbjct: 766 QHAAINFGQYPFGGYVPNRPTLLRKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVM 825
Query: 835 AVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLK 894
AVQ+TLSTHSPDEEYL ++ ++ HW D +V+ F+KFS L +IEK IN RNKD +LK
Sbjct: 826 AVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLK 885
Query: 895 GRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
R GAG+PPYELLLP+S GVTGRGIPNSISI
Sbjct: 886 NRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917
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Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity). 13S-lipoxygenase that can use linolenic acid as substrates. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2 |
| >sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q7XV13|LOX5_ORYSJ Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2 | Back alignment and function description |
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| >sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1 | Back alignment and function description |
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| >sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 926 | ||||||
| 225425842 | 920 | PREDICTED: lipoxygenase 6, choloroplasti | 0.946 | 0.952 | 0.798 | 0.0 | |
| 255547812 | 912 | lipoxygenase, putative [Ricinus communis | 0.963 | 0.978 | 0.773 | 0.0 | |
| 356525142 | 921 | PREDICTED: lipoxygenase 6, choloroplasti | 0.924 | 0.929 | 0.779 | 0.0 | |
| 224100047 | 924 | predicted protein [Populus trichocarpa] | 0.983 | 0.985 | 0.763 | 0.0 | |
| 449435043 | 928 | PREDICTED: lipoxygenase 6, choloroplasti | 0.968 | 0.966 | 0.753 | 0.0 | |
| 224107643 | 825 | predicted protein [Populus trichocarpa] | 0.890 | 1.0 | 0.792 | 0.0 | |
| 10505183 | 816 | lipoxygenase [Zantedeschia aethiopica] | 0.877 | 0.996 | 0.707 | 0.0 | |
| 15220475 | 917 | lipoxygenase 6 [Arabidopsis thaliana] gi | 0.981 | 0.991 | 0.640 | 0.0 | |
| 297838497 | 917 | lipoxygenase family protein [Arabidopsis | 0.981 | 0.991 | 0.637 | 0.0 | |
| 224286530 | 924 | unknown [Picea sitchensis] | 0.942 | 0.944 | 0.621 | 0.0 |
| >gi|225425842|ref|XP_002265505.1| PREDICTED: lipoxygenase 6, choloroplastic [Vitis vinifera] gi|297738375|emb|CBI27576.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 1467 bits (3798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/885 (79%), Positives = 789/885 (89%), Gaps = 9/885 (1%)
Query: 42 PIRAVVNSDQNKATEAATKSVDAKDVNGSLLVSSSSSKEGLVDVRAVITIRKKLKEKLTE 101
PIRAV++S ++K E K+V++KD N L SSSSS +G +DVRAVITIRKK+KEK+TE
Sbjct: 45 PIRAVISS-EDKTVEGGAKAVESKDGNVLLSSSSSSSAKG-IDVRAVITIRKKMKEKITE 102
Query: 102 KIEDQWELFVNGIGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEA 161
KIEDQWE F+NGIGQGI IQL+SE+IDPVT SGKSVES VRGWLPKP S+ I +Y A
Sbjct: 103 KIEDQWEGFMNGIGQGISIQLVSEEIDPVTMSGKSVESFVRGWLPKP--SNLPYIVEYAA 160
Query: 162 NFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIF 221
+F VP DFG+PGA+LI+NLHGKEF+L+EIV+HGFD GP+FFPAN+WIHSRKDN ESRIIF
Sbjct: 161 DFTVPLDFGSPGAVLISNLHGKEFHLMEIVIHGFDEGPIFFPANSWIHSRKDNPESRIIF 220
Query: 222 KNQAYLPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARP 281
+NQAYLPSQTP G+KDLRREDLLS+RGN KGERK H+RIYDYA YNDLGNPDK +DLARP
Sbjct: 221 RNQAYLPSQTPPGLKDLRREDLLSLRGNRKGERKPHDRIYDYAPYNDLGNPDKSEDLARP 280
Query: 282 VLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV 341
VL+GEERPYPRRCRTGRPPT+TDPLCESR EKPHPVYVPRDETFEEIKQNTFS+GRLKA+
Sbjct: 281 VLAGEERPYPRRCRTGRPPTRTDPLCESRSEKPHPVYVPRDETFEEIKQNTFSAGRLKAL 340
Query: 342 LHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVG 401
LHNLIPSIAA+LSSSDIPF CFSDIDKLYN G LLKD+++Q +F + ++KQ L+VG
Sbjct: 341 LHNLIPSIAATLSSSDIPFKCFSDIDKLYNDGVLLKDEEDQKMSGNVFPSNMMKQVLSVG 400
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
+L KYE PA+I RDRFAWLRDNEFARQTLAGVNPVNIE LK FPI+SKLDPA+YGPPES
Sbjct: 401 QKLLKYEVPAIISRDRFAWLRDNEFARQTLAGVNPVNIEILKGFPIVSKLDPAVYGPPES 460
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNK 521
AITKELI++EL G++VE+AIE+KRLFILDYHD+LLPFI K+N+LP+R+ YASRTVFFY +
Sbjct: 461 AITKELIQQELSGITVEEAIEDKRLFILDYHDMLLPFIGKMNTLPERQAYASRTVFFYTR 520
Query: 522 AGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWL 581
G LRP+AIELSLPP+ SSP K +YTHGHDATTHWIWK AKAHVCSNDAGVHQLVNHWL
Sbjct: 521 TGFLRPIAIELSLPPTPSSPGKKRVYTHGHDATTHWIWKQAKAHVCSNDAGVHQLVNHWL 580
Query: 582 MTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGR 641
THA MEPYIIATHRQLS+MHPI KLL PH+RYTLEINALARQSLINGGGIIEA FSPG+
Sbjct: 581 RTHACMEPYIIATHRQLSAMHPINKLLRPHLRYTLEINALARQSLINGGGIIEACFSPGK 640
Query: 642 YAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGL 701
YAMELSSAAYKS W+FDMEALPADL+R RGMA EDPSMP GV+L+IEDYPYAADGL
Sbjct: 641 YAMELSSAAYKSMWQFDMEALPADLIR-----RGMAVEDPSMPCGVKLLIEDYPYAADGL 695
Query: 702 LIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDL 761
LIW AIKEWVESYV HFYSEPN+VTSD+ELQAWW+EIKN+GH+DKRNE+WWPKL TKE L
Sbjct: 696 LIWSAIKEWVESYVDHFYSEPNTVTSDLELQAWWNEIKNEGHYDKRNESWWPKLNTKEHL 755
Query: 762 SGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFL 821
SGI+T MIW ASGQHAAINFGQYPFGGYVPNRPTLMRKL+P E+D YEKFLLNPQ TFL
Sbjct: 756 SGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPHEDDSAYEKFLLNPQSTFL 815
Query: 822 SSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIE 881
SSLPTQLQATKVMAVQDTLSTHSPDEEYLGQ + LHSHWI DPEVL+MF KFSA LEEIE
Sbjct: 816 SSLPTQLQATKVMAVQDTLSTHSPDEEYLGQTHHLHSHWIKDPEVLDMFKKFSAKLEEIE 875
Query: 882 KIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
+II RNK+ LK R GAGIPPYELLLPSSGPGVTGRGIPNSISI
Sbjct: 876 EIIKGRNKNIHLKNRNGAGIPPYELLLPSSGPGVTGRGIPNSISI 920
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255547812|ref|XP_002514963.1| lipoxygenase, putative [Ricinus communis] gi|223546014|gb|EEF47517.1| lipoxygenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356525142|ref|XP_003531186.1| PREDICTED: lipoxygenase 6, choloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224100047|ref|XP_002311724.1| predicted protein [Populus trichocarpa] gi|222851544|gb|EEE89091.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449435043|ref|XP_004135305.1| PREDICTED: lipoxygenase 6, choloroplastic-like [Cucumis sativus] gi|449494883|ref|XP_004159673.1| PREDICTED: lipoxygenase 6, choloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224107643|ref|XP_002314548.1| predicted protein [Populus trichocarpa] gi|222863588|gb|EEF00719.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|10505183|gb|AAG18376.1|AF283894_1 lipoxygenase [Zantedeschia aethiopica] | Back alignment and taxonomy information |
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| >gi|15220475|ref|NP_176923.1| lipoxygenase 6 [Arabidopsis thaliana] gi|75262277|sp|Q9CAG3.1|LOX6_ARATH RecName: Full=Lipoxygenase 6, choloroplastic; Short=AtLOX6; Flags: Precursor gi|12324686|gb|AAG52309.1|AC011020_16 putative lipoxygenase [Arabidopsis thaliana] gi|19698813|gb|AAL91142.1| putative lipoxygenase [Arabidopsis thaliana] gi|34365715|gb|AAQ65169.1| At1g67560 [Arabidopsis thaliana] gi|48958183|emb|CAG38328.1| 13-lipoxygenase [Arabidopsis thaliana] gi|332196543|gb|AEE34664.1| lipoxygenase 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297838497|ref|XP_002887130.1| lipoxygenase family protein [Arabidopsis lyrata subsp. lyrata] gi|297332971|gb|EFH63389.1| lipoxygenase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|224286530|gb|ACN40971.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 926 | ||||||
| TAIR|locus:2008808 | 917 | LOX6 "lipoxygenase 6" [Arabido | 0.981 | 0.991 | 0.614 | 7.6e-302 | |
| TAIR|locus:2030215 | 926 | LOX4 "lipoxygenase 4" [Arabido | 0.944 | 0.944 | 0.525 | 1.3e-251 | |
| TAIR|locus:2018848 | 919 | LOX3 "lipoxygenase 3" [Arabido | 0.873 | 0.880 | 0.548 | 6.8e-246 | |
| UNIPROTKB|P38419 | 924 | CM-LOX1 "Lipoxygenase 7, chlor | 0.857 | 0.859 | 0.503 | 5.3e-214 | |
| TAIR|locus:2096915 | 896 | LOX2 "lipoxygenase 2" [Arabido | 0.849 | 0.878 | 0.483 | 1.9e-209 | |
| TAIR|locus:2011030 | 859 | LOX1 "lipoxygenase 1" [Arabido | 0.863 | 0.931 | 0.466 | 4e-193 | |
| TAIR|locus:2087837 | 886 | LOX5 [Arabidopsis thaliana (ta | 0.866 | 0.905 | 0.436 | 1.3e-178 | |
| UNIPROTKB|P29250 | 870 | LOX1.1 "Linoleate 9S-lipoxygen | 0.866 | 0.921 | 0.425 | 3.1e-170 | |
| ZFIN|ZDB-GENE-050522-330 | 676 | zgc:110251 "zgc:110251" [Danio | 0.389 | 0.534 | 0.335 | 4.8e-47 | |
| ZFIN|ZDB-GENE-060623-19 | 676 | zgc:136911 "zgc:136911" [Danio | 0.389 | 0.534 | 0.335 | 3.2e-44 |
| TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2897 (1024.9 bits), Expect = 7.6e-302, P = 7.6e-302
Identities = 573/932 (61%), Positives = 685/932 (73%)
Query: 1 MSSALKTQLLTGPALRRVPAIPGAVSNGNLRPARVSKSKFCPIRAVVNSDQNKAT-EAAT 59
++S +KT G +L + PA A+S +S+ +RAV++ ++ E
Sbjct: 3 VASPVKTNF-NGVSLVKSPAF-SALSCRKQHRVPISRQ----VRAVISREEKAVDQEDGK 56
Query: 60 KSVDAKDVNGXXXXXXXXXKEGLVDVRAVXXXXXXXXXXXXXXXXDQWELFVNGIGQGIM 119
KS + +N G V AV Q ELF+ IGQG++
Sbjct: 57 KSTNKPLINSSQFPWQRSKYTGSKTVTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGML 116
Query: 120 IQLISEDIDPVTNSG-KSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILIT 178
IQL+SE+IDP T G KS+ES V G LPK V +F A+F VP +FG PGAIL+T
Sbjct: 117 IQLVSEEIDPETGKGRKSLESPVMG-LPKAVKDPRYLVFT--ADFTVPINFGKPGAILVT 173
Query: 179 NLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDL 238
NL E L EI++ + FPANTWIHS+ DN ++RIIF++Q LPS+TP GIK+L
Sbjct: 174 NLLSTEICLSEIIIED-STDTILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKEL 232
Query: 239 RREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGR 298
R +DL+S+RG+GKGERK HERIYDY VYNDLG+P K + + RPVL E PYPRRCRTGR
Sbjct: 233 REKDLVSVRGDGKGERKPHERIYDYDVYNDLGDPRKTERV-RPVLGVPETPYPRRCRTGR 291
Query: 299 PPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXX 358
P DP CESR ++ YVPRDE FEEIK++TF +GR KA+ HN
Sbjct: 292 PLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDI 351
Query: 359 XFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRF 418
FTCFSDID LY S +L + ++ F+ + LNV + L KY+TPAVI+ DRF
Sbjct: 352 PFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGILNVTETLLKYDTPAVIKWDRF 411
Query: 419 AWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL--HGLS 476
AWLRDNEF RQ LAGVNPVNIE LKE PI S LDPA+YGP ES +T+E+I E+ +G +
Sbjct: 412 AWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREVEHYGTT 471
Query: 477 VEKAIEEKRLFILDYHDLLLPFIEKINSLPD--RKTYASRTVFFYNKAGMLRPLAIELSL 534
+EKA+EEKRLF++DYHD+LLPF+EKINS+ + RKTYASRT+FFY+K G LRPLAIELSL
Sbjct: 472 IEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIFFYSKNGALRPLAIELSL 531
Query: 535 PPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIAT 594
PP+ S +NK +YTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWL THASMEPYIIAT
Sbjct: 532 PPTAES-ENKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIAT 590
Query: 595 HRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSF 654
+RQLS+MHP+YKLLHPHMRYTLEINA AR+SLINGGGIIE+ F+PG+YAMELSSAAYKS
Sbjct: 591 NRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSM 650
Query: 655 WRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESY 714
WRFDME LPADL+R RGMAEED S GVRLVI+DYPYAADGLLIW AIK+ VESY
Sbjct: 651 WRFDMEGLPADLVR-----RGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESY 705
Query: 715 VAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASG 774
V HFYS+ S+TSD+ELQAWW EIKNKGH+DK++E WWPKL T +DLS I+T MIW ASG
Sbjct: 706 VKHFYSDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASG 765
Query: 775 QHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVM 834
QHAAINFGQYPFGGYVPNRPTL+RKL+PQE DP YE F+ NPQ++FL SLPTQLQATKVM
Sbjct: 766 QHAAINFGQYPFGGYVPNRPTLLRKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVM 825
Query: 835 AVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLK 894
AVQ+TLSTHSPDEEYL ++ ++ HW D +V+ F+KFS L +IEK IN RNKD +LK
Sbjct: 826 AVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLK 885
Query: 895 GRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
R GAG+PPYELLLP+S GVTGRGIPNSISI
Sbjct: 886 NRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917
|
|
| TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050522-330 zgc:110251 "zgc:110251" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060623-19 zgc:136911 "zgc:136911" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8H016 | LOX6_ORYSJ | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.5346 | 0.9006 | 0.9084 | yes | no |
| O24371 | LOX31_SOLTU | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.5881 | 0.8963 | 0.9080 | N/A | no |
| Q9CAG3 | LOX6_ARATH | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.6405 | 0.9816 | 0.9912 | yes | no |
| O24370 | LOX21_SOLTU | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.5093 | 0.8941 | 0.9210 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.13.11 | 0.691 |
| 3rd Layer | 1.13.11.12 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00035067001 | RecName- Full=Lipoxygenase; EC=1.13.11.12;; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity) (920 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | HPLA | • | 0.899 | ||||||||
 | GSVIVG00025319001 | • | 0.899 | ||||||||
 | GSVIVG00020785001 | • | 0.899 | ||||||||
 | GSVIVG00020782001 | • | 0.899 | ||||||||
 | GSVIVG00019084001 | • | 0.899 | ||||||||
 | GSVIVG00014710001 | • | 0.899 | ||||||||
 | GSVIVG00001547001 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 926 | |||
| PLN02305 | 918 | PLN02305, PLN02305, lipoxygenase | 0.0 | |
| PLN02264 | 919 | PLN02264, PLN02264, lipoxygenase | 0.0 | |
| PLN02337 | 866 | PLN02337, PLN02337, lipoxygenase | 0.0 | |
| pfam00305 | 667 | pfam00305, Lipoxygenase, Lipoxygenase | 0.0 | |
| cd01751 | 137 | cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox | 8e-35 | |
| smart00308 | 105 | smart00308, LH2, Lipoxygenase homology 2 (beta bar | 3e-11 | |
| pfam01477 | 115 | pfam01477, PLAT, PLAT/LH2 domain | 9e-07 |
| >gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase | Back alignment and domain information |
|---|
Score = 1670 bits (4325), Expect = 0.0
Identities = 727/908 (80%), Positives = 797/908 (87%), Gaps = 10/908 (1%)
Query: 22 PGAVSNGNLRPARV---SKSKFCPIRAVVNSDQNKATEAATKSVDAKDVNGSLLVSSSSS 78
P + G R RV IRAV++S+ E+ +S + SLL SS S
Sbjct: 18 PAFSALGRRRRTRVPISRSPVAGSIRAVISSEDKAVEESGGESANKSVDGSSLLPSSRSK 77
Query: 79 KEGLVDVRAVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDPVTNSGKSVE 138
G +DVRAVITIRKK+KEK+TEK EDQWE F+NGIGQGI+IQL+SE+IDPVT SGKSVE
Sbjct: 78 YAGGIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVE 137
Query: 139 SAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGFDGG 198
S+VRGWLPKP S++ +I +Y A+F VP DFG PGA+L+TNLHGKEFYL+EIV+HGFD G
Sbjct: 138 SSVRGWLPKP--SNDPHIVEYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDG 195
Query: 199 PVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDLRREDLLSIRGNGKGERKHHE 258
P+FFPANTWIHSRKDN ESRIIF+NQAYLPSQTP GIKDLRREDLLS+RGNGKGERK H+
Sbjct: 196 PIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRREDLLSLRGNGKGERKPHD 255
Query: 259 RIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVY 318
RIYDYA YNDLGNPDKD+DLARPVL GEE PYPRRCRTGRPPTK DPLCESRIEKPHPVY
Sbjct: 256 RIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVY 315
Query: 319 VPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKD 378
VPRDETFEEIK+NTFS+GRLKA+LHNLIPSIAA+LSSSDIPFTCFSDIDKLYN G LLK
Sbjct: 316 VPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKT 375
Query: 379 DDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVN 438
++ ++ FL +KQ L+V +RL KY+ PAVI+RDRFAWLRDNEFARQ LAGVNPVN
Sbjct: 376 EEPKDIGLNPFLGNFMKQVLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVN 435
Query: 439 IEFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPF 498
IE LKEFPILSKLDPA+YGPPESA+T+ELIE EL G++VEKAIEEKRLFILDYHD+LLPF
Sbjct: 436 IEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVEKAIEEKRLFILDYHDMLLPF 495
Query: 499 IEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWI 558
IEK+NSLP+RK YASRTVFFY+KAG LRP+AIELSLPP+ SSP NK +YTHGHDATTHWI
Sbjct: 496 IEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWI 555
Query: 559 WKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEI 618
WKLAKAHVCSNDAGVHQLVNHWL THA MEPYIIATHRQLS+MHPIYKLLHPHMRYTLEI
Sbjct: 556 WKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEI 615
Query: 619 NALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAE 678
NALARQSLINGGGIIEA FSPG+YAMELSSAAYKS WRFDMEALPADL+R RGMAE
Sbjct: 616 NALARQSLINGGGIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIR-----RGMAE 670
Query: 679 EDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEI 738
EDPSMP GVRLVIEDYPYAADGLLIW AIKEWVESYV HFYSEPNS+TSD+ELQAWW EI
Sbjct: 671 EDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEI 730
Query: 739 KNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMR 798
KNKGH+DKRNE WWPKL TKEDLSGI+T MIW ASGQHAAINFGQYPFGGYVPNRPTLMR
Sbjct: 731 KNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMR 790
Query: 799 KLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHS 858
KL+PQENDP YEKF+ NPQ+TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLG++ LHS
Sbjct: 791 KLIPQENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHS 850
Query: 859 HWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGR 918
HWIND EV+ +F+KFSA LEEIEK IN RNKD RLK R GAGIPPYELLLP+SGPGVTGR
Sbjct: 851 HWINDHEVVKLFNKFSARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGR 910
Query: 919 GIPNSISI 926
GIPNSISI
Sbjct: 911 GIPNSISI 918
|
Length = 918 |
| >gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 926 | |||
| PLN02305 | 918 | lipoxygenase | 100.0 | |
| PLN02264 | 919 | lipoxygenase | 100.0 | |
| PLN02337 | 866 | lipoxygenase | 100.0 | |
| PF00305 | 667 | Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li | 100.0 | |
| cd01751 | 137 | PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re | 100.0 | |
| smart00308 | 105 | LH2 Lipoxygenase homology 2 (beta barrel) domain. | 99.14 | |
| PF01477 | 113 | PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg | 98.65 | |
| cd00113 | 116 | PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin | 98.52 | |
| cd02899 | 109 | PLAT_SR Scavenger receptor protein. A subfamily of | 97.77 | |
| cd01753 | 113 | PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u | 97.47 | |
| cd01756 | 120 | PLAT_repeat PLAT/LH2 domain repeats of family of p | 97.29 | |
| cd01752 | 120 | PLAT_polycystin PLAT/LH2 domain of polycystin-1 li | 96.88 | |
| cd01757 | 114 | PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter | 96.78 | |
| cd01754 | 129 | PLAT_plant_stress PLAT/LH2 domain of plant-specifi | 95.96 |
| >PLN02305 lipoxygenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-278 Score=2401.08 Aligned_cols=902 Identities=81% Similarity=1.304 Sum_probs=844.8
Q ss_pred ccccccccCCCCccccCCCccccccccCccc---ceEEEEeCCCccchhhhccccccccccCCeeeccCCC-CcceEEEE
Q 002417 11 TGPALRRVPAIPGAVSNGNLRPARVSKSKFC---PIRAVVNSDQNKATEAATKSVDAKDVNGSLLVSSSSS-KEGLVDVR 86 (926)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 86 (926)
.|-.++.+|+ .-++|+.|+.+|--+++. +|||||++++ ||.+...+.--+|-+-||.+..++++ -....+||
T Consensus 10 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 85 (918)
T PLN02305 10 SGVSLRASPA---FSALGRRRRTRVPISRSPVAGSIRAVISSED-KAVEESGGESANKSVDGSSLLPSSRSKYAGGIDVR 85 (918)
T ss_pred CceEEeeCcc---cccccceeeeecccccCCCCCceeEEecccc-cccccccccccccccccccccccccchhccCCeEE
Confidence 3445666776 445688888777666543 8999999876 55554555556677778877777632 22346999
Q ss_pred EEEEEEecccccchhcchhhhhhhhhhcCCcEEEEEeecccCCCCCCC-ccccccccccccCCCCCCCcceEEEEEEEee
Q 002417 87 AVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDPVTNSG-KSVESAVRGWLPKPVTSSNVNIFQYEANFGV 165 (926)
Q Consensus 87 ~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 165 (926)
|+||||+|++++++++.++++|+++|++||+|+|||||++++|+||+| ++ +++|++|++++...+++ ++|+++|+|
T Consensus 86 ~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~-~~~l~~~~~~~~~~~~~--~~~~~~f~~ 162 (918)
T PLN02305 86 AVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSV-ESSVRGWLPKPSNDPHI--VEYAADFTV 162 (918)
T ss_pred EEEEEEeecccchhhcccchhhHHHHhhCCeEEEEEEeccccCCCCCcccc-cchhhccccCCCCCCCc--eEEEEEEee
Confidence 999999999999999999999999999999999999999999999988 66 99999999874332667 799999999
Q ss_pred cCCCCCceEEEEEecCCCceeEeEEEEeecCCCeEEEeecccccCCCCCCCCeEEeeccccCcCCCChhhHHHHHHHHHh
Q 002417 166 PSDFGNPGAILITNLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDLRREDLLS 245 (926)
Q Consensus 166 ~~~fG~pgAi~v~n~h~~e~fl~~i~l~~~~~~~i~F~cnsWV~~~~~~~~~riff~n~~ylp~~tp~~l~~~R~~EL~~ 245 (926)
|++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||+|||+|||++|++|||+||++
T Consensus 163 ~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re~eL~~ 242 (918)
T PLN02305 163 PFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRREDLLS 242 (918)
T ss_pred ccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCcccCCCCCc
Q 002417 246 IRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETF 325 (926)
Q Consensus 246 lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg~~~pyPRR~rTgr~~~~~dp~~e~~~~~~~~~yvPrDe~F 325 (926)
|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+||++||+||||...+..+||||||+|
T Consensus 243 lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~YvPrDE~f 322 (918)
T PLN02305 243 LRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPRDETF 322 (918)
T ss_pred hcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcCCCCCCCc
Confidence 99999999999999999999999999999999999999996699999999999999999999999765556899999999
Q ss_pred chhhhcccccchHHHHHHhhHHHHHHhccCCCCCCCChHhHHHHhhCCccCCCchhhchhhhhH-HH-HHHHHHhhcccc
Q 002417 326 EEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKDDDEQNGRSKLF-LA-TVIKQFLNVGDR 403 (926)
Q Consensus 326 ~~~K~~~f~~~~~k~~~~~~~p~~~~~~~~~~~~f~sf~di~~Ly~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 403 (926)
+++|++||+++++|+++|.++|.|+++++.++++|+||+||++||++|+++|.. .....+.+ +| .+.+.++++++.
T Consensus 323 ~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~--~~~~~~~~p~~~~~~~~i~~~~~~ 400 (918)
T PLN02305 323 EEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTE--EPKDIGLNPFLGNFMKQVLSVSER 400 (918)
T ss_pred ccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCch--hhhhhhcCCchHHHHHHhhhcccc
Confidence 999999999999999999999999999988899999999999999999999852 11222223 32 444445888999
Q ss_pred cccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCCCCccCCCCCCcccHHHHHhhhccCCHHHHHhc
Q 002417 404 LFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVEKAIEE 483 (926)
Q Consensus 404 ~~kfp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l~G~Tl~eal~~ 483 (926)
++|||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+++|+||+|||+..|+|+||+|||++
T Consensus 401 ~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G~TleeAl~~ 480 (918)
T PLN02305 401 LLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVEKAIEE 480 (918)
T ss_pred cccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCCCcHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEEecCCCCCCCCCCCceeeCCCCCCChhHHHHHH
Q 002417 484 KRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAK 563 (926)
Q Consensus 484 grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~VfTP~d~~~~~~~W~LAK 563 (926)
|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++..++||||+++++++|.|+|||
T Consensus 481 ~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~w~W~LAK 560 (918)
T PLN02305 481 KRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWIWKLAK 560 (918)
T ss_pred CCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777677789999987778899999999
Q ss_pred HHHhhcchhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhccccchhhccchHHHhhccccCCccccccccCchhH
Q 002417 564 AHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA 643 (926)
Q Consensus 564 ~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~ 643 (926)
|||++||++|||+|+||++||++|||||||||||||++|||||||+||||+||+||++||++|||+||+||++|++|+|+
T Consensus 561 ~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~fspg~~~ 640 (918)
T PLN02305 561 AHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFSPGKYA 640 (918)
T ss_pred HHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceeeeeccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCcCCccHHhhhcccccCCCccCCCCCCccccccccCCccchhhHHHHHHHHHHHHHHcccccCccc
Q 002417 644 MELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPN 723 (926)
Q Consensus 644 ~elss~~Yk~~w~f~~~~LP~DL~~~~~~~RG~a~~D~~~p~gl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~ 723 (926)
|||++++|++.|+|++++||+||++ |||+++|+++|||++|.|||||||+|||+||+||++||++||++||++|+
T Consensus 641 ~elss~aYk~~w~Fd~~~LP~DL~k-----RGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~~D~ 715 (918)
T PLN02305 641 MELSSAAYKSMWRFDMEALPADLIR-----RGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPN 715 (918)
T ss_pred HHHHHHHHHhcCcCccccCHHHHHH-----cCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCCChh
Confidence 9999999998899999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccCCcccccccCCcccccccCCCC
Q 002417 724 SVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQ 803 (926)
Q Consensus 724 ~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~IIf~aSaqHAAVNfgQy~y~gfvPN~P~~lr~p~P~ 803 (926)
+|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||++||+
T Consensus 716 ~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp~P~ 795 (918)
T PLN02305 716 SITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQ 795 (918)
T ss_pred hhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002417 804 ENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKI 883 (926)
Q Consensus 804 ~g~~e~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~yLG~~~~~~~~~~~d~~~~~A~~~F~~~L~~Ie~~ 883 (926)
+++++|++|+.+||++||++||++.||+.+|+++++||+|++||+||||+.+.+..|+.|+++++|+++|+++|++||++
T Consensus 796 ~~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~eIE~~ 875 (918)
T PLN02305 796 ENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKT 875 (918)
T ss_pred CCCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 98889999999999999999999999999999999999999999999999872227999999999999999999999999
Q ss_pred HHhhccccccccccCCCCCCceeecCCCCCCCccCCcCccccC
Q 002417 884 INTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926 (926)
Q Consensus 884 I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPNSIsI 926 (926)
|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 876 I~~RN~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 876 INERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918 (918)
T ss_pred HHHHhCCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence 9999999999999999999999999999999999999999998
|
|
| >PLN02264 lipoxygenase | Back alignment and domain information |
|---|
| >PLN02337 lipoxygenase | Back alignment and domain information |
|---|
| >PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain | Back alignment and domain information |
|---|
| >cd02899 PLAT_SR Scavenger receptor protein | Back alignment and domain information |
|---|
| >cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase | Back alignment and domain information |
|---|
| >cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function | Back alignment and domain information |
|---|
| >cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins | Back alignment and domain information |
|---|
| >cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family | Back alignment and domain information |
|---|
| >cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 926 | ||||
| 1ik3_A | 857 | Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope | 0.0 | ||
| 1rov_A | 857 | Lipoxygenase-3 Treated With Cumene Hydroperoxide Le | 0.0 | ||
| 2iuj_A | 853 | Crystal Structure Of Soybean Lipoxygenase-B Length | 0.0 | ||
| 3pzw_A | 839 | Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | 0.0 | ||
| 3bnd_A | 839 | Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | 0.0 | ||
| 3bnb_A | 839 | Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | 0.0 | ||
| 2sbl_B | 839 | The Three-Dimensional Structure Of An Arachidonic A | 0.0 | ||
| 3bne_A | 839 | Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | 0.0 | ||
| 1fgr_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng | 0.0 | ||
| 1fgq_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng | 0.0 | ||
| 3bnc_A | 839 | Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | 0.0 | ||
| 1fgt_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng | 0.0 | ||
| 1fgm_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng | 0.0 | ||
| 1y4k_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng | 0.0 | ||
| 1fgo_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng | 0.0 | ||
| 2iuk_A | 864 | Crystal Structure Of Soybean Lipoxygenase-D Length | 0.0 | ||
| 3dy5_A | 1066 | Allene Oxide Synthase 8r-Lipoxygenase From Plexaura | 4e-50 | ||
| 3fg1_A | 696 | Crystal Structure Of Delta413-417:gs Lox Length = 6 | 6e-50 | ||
| 2fnq_A | 699 | Insights From The X-Ray Crystal Structure Of Coral | 1e-49 | ||
| 3fg4_A | 696 | Crystal Structure Of Delta413-417:gs I805a Lox Leng | 3e-49 | ||
| 3fg3_A | 696 | Crystal Structure Of Delta413-417:gs I805w Lox Leng | 4e-49 | ||
| 3vf1_A | 698 | Structure Of A Calcium-Dependent 11r-Lipoxygenase S | 5e-49 | ||
| 3v92_B | 691 | S663a Stable-5-Lox Length = 691 | 1e-45 | ||
| 3o8y_A | 691 | Stable-5-Lipoxygenase Length = 691 | 2e-45 | ||
| 3v98_A | 691 | S663d Stable-5-Lox Length = 691 | 2e-45 | ||
| 1lox_A | 662 | Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | 1e-43 | ||
| 2p0m_A | 662 | Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy | 2e-43 | ||
| 3rde_A | 573 | Crystal Structure Of The Catalytic Domain Of Porcin | 7e-43 | ||
| 3d3l_A | 541 | The 2.6 A Crystal Structure Of The Lipoxygenase Dom | 2e-40 |
| >pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 | Back alignment and structure |
|
| >pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 | Back alignment and structure |
| >pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 | Back alignment and structure |
| >pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | Back alignment and structure |
| >pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | Back alignment and structure |
| >pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | Back alignment and structure |
| >pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 | Back alignment and structure |
| >pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 | Back alignment and structure |
| >pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 | Back alignment and structure |
| >pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 | Back alignment and structure |
| >pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 | Back alignment and structure |
| >pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 | Back alignment and structure |
| >pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 | Back alignment and structure |
| >pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 | Back alignment and structure |
| >pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 | Back alignment and structure |
| >pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 | Back alignment and structure |
| >pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 | Back alignment and structure |
| >pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 | Back alignment and structure |
| >pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | Back alignment and structure |
| >pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 | Back alignment and structure |
| >pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 | Back alignment and structure |
| >pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp Target) Length = 541 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 | Back alignment and structure |
|---|
Score = 915 bits (2366), Expect = 0.0
Identities = 366/850 (43%), Positives = 504/850 (59%), Gaps = 26/850 (3%)
Query: 85 VRAVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDPVTNSGK-SVESAVRG 143
++ + + K + ++ + +G+ + +QLIS GK ++ + G
Sbjct: 8 IKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 144 WLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGF-DGGPVFF 202
+ + + +F G PGA I N EF+L + + + G + F
Sbjct: 67 INTS-LPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 203 PANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYD 262
N+W+++ K RI F N Y+PS+TPA + R E+L S+RGNG GERK ++RIYD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYD 185
Query: 263 YAVYNDLGNPDKDKDLARPVLSG-EERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPR 321
Y VYNDLGNPDK + LARPVL G PYPRR RTGR PT TDP E + YVPR
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQ---GEVFYVPR 242
Query: 322 DETFEEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIP--FTCFSDIDKLYNSGFLLKDD 379
DE +K K++ + P+ ++ P F F D+ LY G L D
Sbjct: 243 DENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRD 302
Query: 380 DEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNI 439
+ + + G + K+ P V++ + AW+ D EFAR+ +AGVNP I
Sbjct: 303 VISTIIPLPVIKELYR---TDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVI 359
Query: 440 EFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFI 499
L+EFP S LDPAIYG S IT + ++ L G ++++A+ +RLF+LDYHD+ +P++
Sbjct: 360 RGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYV 417
Query: 500 EKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPS--RSSPQNKHIYTHGHDATTHW 557
+IN L KTYA+RT+ F + G L+P+AIELSLP S S + +
Sbjct: 418 RQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVEST 477
Query: 558 IWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLE 617
IW LAKA+V ND+ HQL++HWL THA+MEP++IATHR LS +HPIYKLL PH R +
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 618 INALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMA 677
INALARQSLIN GIIE +F P +Y++E+SSA YK+ W F +ALPADL++ RG+A
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIK-----RGVA 591
Query: 678 EEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSE 737
+DPS P GVRL+IEDYPYAADGL IW AIK WV+ YV +Y+ + V +D ELQ WW E
Sbjct: 592 IKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKE 651
Query: 738 IKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLM 797
KGH D +++ WWPKL+T EDL + I+IW AS HAA+NFGQYP+GG + NRPT
Sbjct: 652 AVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTAS 711
Query: 798 RKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLH 857
R+L+P++ P YE+ + N + +L ++ ++L ++V + LSTH+ DE YLGQ +
Sbjct: 712 RRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDN-- 769
Query: 858 SHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKG-RCGAGIPPYELLLPSSGPGVT 916
HW +D + L F KF L+EIE+ + RN D L+G R G PY LL PSS G+T
Sbjct: 770 PHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLT 829
Query: 917 GRGIPNSISI 926
RGIPNSISI
Sbjct: 830 FRGIPNSISI 839
|
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 | Back alignment and structure |
|---|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 926 | |||
| 2iuk_A | 864 | SEED lipoxygenase; iron, dioxygenase, metal-bindin | 100.0 | |
| 1f8n_A | 839 | Lipoxygenase-1; dioxygenase, metalloprotein, fatty | 100.0 | |
| 2iuj_A | 853 | Lipoxygenase L-5; dioxygenase, metal-binding, oxid | 100.0 | |
| 1lox_A | 662 | 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot | 100.0 | |
| 3v98_A | 691 | Arachidonate 5-lipoxygenase; dioxygenase, oxidored | 100.0 | |
| 3fg1_A | 696 | Allene oxide synthase-lipoxygenase protein; arichi | 100.0 | |
| 3vf1_A | 698 | 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik | 100.0 | |
| 3dy5_A | 1066 | Allene oxide synthase-lipoxygenase protein; fusion | 100.0 | |
| 3rde_A | 573 | Arachidonate 12-lipoxygenase, 12S-type; C-terminal | 100.0 | |
| 3d3l_A | 541 | Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir | 100.0 | |
| 2wxu_A | 370 | Phospholipase C; cytolysis, hydrolase, hemolysis, | 97.59 | |
| 1olp_A | 370 | Alpha-toxin; zinc phospholipase C, GAS gangrene de | 97.58 | |
| 3cwz_B | 384 | RAB6IP1, RAB6-interacting protein 1; RAB small GTP | 93.64 |
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-260 Score=2273.28 Aligned_cols=823 Identities=44% Similarity=0.776 Sum_probs=789.7
Q ss_pred EEEEEEEEEEecccccchhcc----------------------hhhhhhhhhhcCCcEEEEEeecccCCCCCCC-ccccc
Q 002417 83 VDVRAVITIRKKLKEKLTEKI----------------------EDQWELFVNGIGQGIMIQLISEDIDPVTNSG-KSVES 139 (926)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~~~----------------------~~~~d~~~~~~g~~v~lqLvS~~~~~~~~~~-~~~~~ 139 (926)
.+|||+|+||+|++++++++. ++++|+++|++|++|+|||||+++||+||+| +|+++
T Consensus 9 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~~~~~~~k~~~~~ 88 (864)
T 2iuk_A 9 QKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGKEV 88 (864)
T ss_dssp CCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEEEecccccccccccccccccccccccccccccccccchhhhHHHhccCeEEEEEEecccCCCCCCCcCCCcc
Confidence 479999999999999999888 8999999999999999999999999999999 99999
Q ss_pred cccccccC-CCCCCCcceEEEEEEEeecCCCCCceEEEEEecCCCceeEeEEEEeecCC-CeEEEeecccccCCCCCCCC
Q 002417 140 AVRGWLPK-PVTSSNVNIFQYEANFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGFDG-GPVFFPANTWIHSRKDNAES 217 (926)
Q Consensus 140 ~~~~~~~~-~~~~~~~~~~~~~~~f~~~~~fG~pgAi~v~n~h~~e~fl~~i~l~~~~~-~~i~F~cnsWV~~~~~~~~~ 217 (926)
+|++|+.+ +..++++ ++|+++|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++
T Consensus 89 ~~~~~~~~~~~~~~~~--~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~ 166 (864)
T 2iuk_A 89 YLEKHLPTLPTLGARQ--DAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKN 166 (864)
T ss_dssp ECCEEECSCSSCCTTC--EEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSC
T ss_pred cccccccCCCcCCCCc--EEEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCCCCC
Confidence 99999955 4467788 89999999999999999999999999999999999999997 99999999999999999999
Q ss_pred eEEeeccccCcCCCChhhHHHHHHHHHhhhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCC-CCCCCCCCCCC
Q 002417 218 RIIFKNQAYLPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSG-EERPYPRRCRT 296 (926)
Q Consensus 218 riff~n~~ylp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg-~~~pyPRR~rT 296 (926)
||||+||+|||++||++|++|||+||++|||||+||||+||||||||||||||+||++++ |||||| ++|||||||||
T Consensus 167 RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR~rt 244 (864)
T 2iuk_A 167 RIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRVRT 244 (864)
T ss_dssp EEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCEECC
T ss_pred ceeccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--CcccCCCCCCCCCccccC
Confidence 999999999999999999999999999999999999999999999999999999999988 999999 89999999999
Q ss_pred CCCCCCCCCCCcccCCCCCCcccCCCCCcchhhhcccccchHHHHHHhhHHHHHHhcc---CCCCCCCChHhHHHHhhCC
Q 002417 297 GRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLS---SSDIPFTCFSDIDKLYNSG 373 (926)
Q Consensus 297 gr~~~~~dp~~e~~~~~~~~~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~~~~~~~---~~~~~f~sf~di~~Ly~~~ 373 (926)
||+|+++||.+|||+ . +||||||+|++.|.+||.++++|++++.++|.++++++ .+.++|+||+||++||++|
T Consensus 245 gr~~~~~dp~~e~~~-~---~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g 320 (864)
T 2iuk_A 245 GRERTRTDPNSEKPG-E---VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGG 320 (864)
T ss_dssp CCCBCSSCTTSBCCC-C---CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSC
T ss_pred CCCCCCCCCCccccc-c---CCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHHHhcc
Confidence 999999999999994 2 99999999999999999999999999999999999884 2578999999999999999
Q ss_pred ccCCCchhhchhhhhH--HHHHHHHHhhcccccccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCC
Q 002417 374 FLLKDDDEQNGRSKLF--LATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKL 451 (926)
Q Consensus 374 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~kfp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~l 451 (926)
+++|+ ...+.+ ++.+++++++++++++|||+|+||+.++++|++|+|||||+|||+||++|++|++||++|+|
T Consensus 321 ~~l~~-----~~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~l 395 (864)
T 2iuk_A 321 IKLPT-----DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTL 395 (864)
T ss_dssp EECCH-----HHHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCCCS
T ss_pred ccCch-----hhhcccCcHHHHHHHhhccccchhcCCCcceecccchhhhchHHHHHHHhcCCCchhhhhhhccCCcccC
Confidence 98884 222332 23455666778899999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCcccHHHHHhhhccCCHHHHHhcCCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEE
Q 002417 452 DPAIYGPPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIE 531 (926)
Q Consensus 452 d~~~yg~~~s~IT~e~i~~~l~G~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIq 531 (926)
||++||+++|+||++||+..++|+||++||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+|||||
T Consensus 396 dp~~yg~~~s~it~e~i~~~l~g~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlAIq 475 (864)
T 2iuk_A 396 DPTLYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIE 475 (864)
T ss_dssp CHHHHCCCCCCCCHHHHGGGTTTCCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEE
T ss_pred ChhhcCCcccccCHHHHhhccCCCcHHHHHhcCCEEEecchhhhccchhhcccCCCceeecceEEEEEcCCCCEeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCC--CCCCceeeCCCCCCChhHHHHHHHHHhhcchhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhcc
Q 002417 532 LSLPPSRSS--PQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLH 609 (926)
Q Consensus 532 L~~~~~~~~--~~~~~VfTP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~ 609 (926)
|++|+++++ ++.++||||+|+++++|.|+|||+||++||+++||+++||++||++||||+|||+||||.+|||||||.
T Consensus 476 Ls~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~ 555 (864)
T 2iuk_A 476 LSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLY 555 (864)
T ss_dssp EEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHG
T ss_pred eeCCCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCCccCchHHhhH
Confidence 999876544 367999999987778999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhccchHHHhhccccCCccccccccCchhHHHHHHHHHhccccCCcCCccHHhhhcccccCCCccCCCCCCccccc
Q 002417 610 PHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRL 689 (926)
Q Consensus 610 PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~~elss~~Yk~~w~f~~~~LP~DL~~~~~~~RG~a~~D~~~p~gl~l 689 (926)
||||+||+||++||+.|||+||++|++|++|+++|||++++|++ |+|++++||+||++ |||+++|+++||||||
T Consensus 556 PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~elss~ayk~-w~f~~~~LP~DL~~-----RGva~~D~~~p~gl~l 629 (864)
T 2iuk_A 556 PHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKN-WVFTHQALPADLVK-----RGLAIEDPSAPHGLRL 629 (864)
T ss_dssp GGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGSSHHHHHHH-----TTSEEECSSSTTSEEE
T ss_pred HHHHHHHHHHHHHHHhccCCCCceeeeccCchhHHHHHHHHHcc-CCCccccCcHHHHh-----cCCCCCCccccccccc
Confidence 99999999999999999999999999999999999999999997 99999999999999 9999999999999999
Q ss_pred cccCCccchhhHHHHHHHHHHHHHHcccccCcccccCCCHHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhhh
Q 002417 690 VIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMI 769 (926)
Q Consensus 690 ~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~II 769 (926)
.|||||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+||
T Consensus 630 ~ipdYpYadDGL~iW~AIk~~V~~yV~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~II 709 (864)
T 2iuk_A 630 VIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIV 709 (864)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTTGGGTTCTTCCCSSSHHHHHHHHHHHH
T ss_pred cCCCCCccccHHHHHHHHHHHHHHHHHHHcCCchhhcCCHHHHHHHHHHHhcCCCCCCCCCCCCCcCCHHHHHHHhheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCcccccccCCcccccccCCCCCCChhhhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCcc
Q 002417 770 WTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEY 849 (926)
Q Consensus 770 f~aSaqHAAVNfgQy~y~gfvPN~P~~lr~p~P~~g~~e~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~y 849 (926)
|+||+||||||||||+|+||+||+|++||+|||++|+.+|++|+.+||+++|++||++.||+.+|+++++||+|++||+|
T Consensus 710 f~aSaqHAAVNFgQydy~gfvPN~P~~~r~p~P~~G~~~~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~y 789 (864)
T 2iuk_A 710 WTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIY 789 (864)
T ss_dssp HHHTHHHHHHHTTHHHHHTSTTTSCCCCCSCCCCTTSHHHHHHHHCHHHHHHTTSCCHHHHHHHHHHHHHHTCCCSSCCB
T ss_pred ecccchhhhhccccchhhcccCCCChhhcCCCCCCCchhHhhhhhChHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCccc
Confidence 99999999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCCCCceeecCCCCCCCccCCcCccccC
Q 002417 850 LGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926 (926)
Q Consensus 850 LG~~~~~~~~~~~d~~~~~A~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPNSIsI 926 (926)
||+|++ +.|++|+++++|+++|+++|++||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 790 LG~~~~--~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s~~g~t~~~IPNSIsI 864 (864)
T 2iuk_A 790 LGERET--PNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864 (864)
T ss_dssp TTCCSC--TTSCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCCCSSSCSCCCBSSCCC
T ss_pred ccccCc--cccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCCCCCCceeeCCCCCCCcccCCCCCcccC
Confidence 999987 799999999999999999999999999999999999999999999999999999999999999999998
|
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... | Back alignment and structure |
|---|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A | Back alignment and structure |
|---|
| >1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 | Back alignment and structure |
|---|
| >3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 926 | ||||
| d3bnea1 | 690 | a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom | 0.0 | |
| d2p0ma1 | 551 | a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory | 0.0 | |
| d3bnea2 | 143 | b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl | 6e-34 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Score = 920 bits (2379), Expect = 0.0
Identities = 340/707 (48%), Positives = 452/707 (63%), Gaps = 24/707 (3%)
Query: 227 LPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSG- 285
+PS+TPA + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G
Sbjct: 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60
Query: 286 EERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNL 345
PYPRR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 61 STFPYPRRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIV 117
Query: 346 IPSIAASLSSSDIP--FTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFL-NVGD 402
P+ ++ P F F D+ LY G L D S + VIK+ G
Sbjct: 118 QPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI----STIIPLPVIKELYRTDGQ 173
Query: 403 RLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESA 462
+ K+ P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S
Sbjct: 174 HILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSK 233
Query: 463 ITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKA 522
IT + ++ + G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F +
Sbjct: 234 ITADSLDLD--GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLRED 291
Query: 523 GMLRPLAIELSLPPS--RSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW 580
G L+P+AIELSLP S S + + IW LAKA+V ND+ HQL++HW
Sbjct: 292 GTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW 351
Query: 581 LMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPG 640
L THA+MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI E +F P
Sbjct: 352 LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPS 411
Query: 641 RYAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADG 700
+Y++E+SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADG
Sbjct: 412 KYSVEMSSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADG 465
Query: 701 LLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKED 760
L IW AIK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T ED
Sbjct: 466 LEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLED 525
Query: 761 LSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTF 820
L + I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +
Sbjct: 526 LVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAY 585
Query: 821 LSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEI 880
L ++ ++L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EI
Sbjct: 586 LRTITSKLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEI 643
Query: 881 EKIINTRNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
E+ + RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 644 EEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 926 | |||
| d3bnea1 | 690 | Lipoxigenase, C-terminal domain {Soybean (Glycine | 100.0 | |
| d2p0ma1 | 551 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 100.0 | |
| d3bnea2 | 143 | Plant lipoxigenase {Soybean (Glycine max), isozyme | 100.0 | |
| d2p0ma2 | 111 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 97.08 | |
| d1olpa2 | 121 | Alpha-toxin, C-terminal domain {Clostridium absonu | 96.46 | |
| d1ca1a2 | 121 | Alpha-toxin, C-terminal domain {Clostridium perfri | 95.82 | |
| d1rp1a1 | 113 | Pancreatic lipase, C-terminal domain {Dog (Canis f | 81.01 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Probab=100.00 E-value=1.8e-220 Score=1908.60 Aligned_cols=683 Identities=49% Similarity=0.875 Sum_probs=661.1
Q ss_pred CcCCCChhhHHHHHHHHHhhhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCC-CCCCCCCCCCCCCCCCCCCC
Q 002417 227 LPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSG-EERPYPRRCRTGRPPTKTDP 305 (926)
Q Consensus 227 lp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg-~~~pyPRR~rTgr~~~~~dp 305 (926)
||+|||++|++|||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+||++||
T Consensus 1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp 80 (690)
T d3bnea1 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP 80 (690)
T ss_dssp CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999 78999999999999999999
Q ss_pred CCcccCCCCCCcccCCCCCcchhhhcccccchHHHHHHhhHHHHHHhcc--CCCCCCCChHhHHHHhhCCccCCCchhhc
Q 002417 306 LCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLS--SSDIPFTCFSDIDKLYNSGFLLKDDDEQN 383 (926)
Q Consensus 306 ~~e~~~~~~~~~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~~~~~~~--~~~~~f~sf~di~~Ly~~~~~~~~~~~~~ 383 (926)
++|||... +||||||+|+++|++||+++++|+++|.++|.|+++++ .+.++|+||+||++||++|+++|.+
T Consensus 81 ~~e~r~~~---~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~~---- 153 (690)
T d3bnea1 81 NTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRD---- 153 (690)
T ss_dssp TSBCCCSS---CCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCHH----
T ss_pred CcccCCCC---CCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCchh----
Confidence 99999775 99999999999999999999999999999999999874 4578999999999999999988852
Q ss_pred hhhhhH-HHHHHHHHhhcccccccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCCCCccCCCCCCc
Q 002417 384 GRSKLF-LATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESA 462 (926)
Q Consensus 384 ~~~~~~-~~~~~~~~~~~~~~~~kfp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~ 462 (926)
.+.+.+ ++.++++++++++.++|||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+||++.||+++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~s~ 233 (690)
T d3bnea1 154 VISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSK 233 (690)
T ss_dssp HHHHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCCCC
T ss_pred hhhhcccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCchhhh
Confidence 233333 5678888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHhhhccCCHHHHHhcCCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEEecCCCCCCC--
Q 002417 463 ITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSS-- 540 (926)
Q Consensus 463 IT~e~i~~~l~G~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIqL~~~~~~~~-- 540 (926)
||+++++ ++|+||++||++|||||+||||+++|++.++|...+++.|||+||||++++|+|+||||||+++++.++
T Consensus 234 it~~~i~--l~G~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~~~ 311 (690)
T d3bnea1 234 ITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 311 (690)
T ss_dssp CCGGGCC--CTTCCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCCC
T ss_pred hhHhhhc--cCccHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCCcccC
Confidence 9999885 789999999999999999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCceeeCCCCCCChhHHHHHHHHHhhcchhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhccccchhhccchH
Q 002417 541 PQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINA 620 (926)
Q Consensus 541 ~~~~~VfTP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~ 620 (926)
++.++||||+|+++++|.|+|||+||++||+++||+|+||++||++|||||||||||||.+|||||||.||||+||+||+
T Consensus 312 ~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~ 391 (690)
T d3bnea1 312 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINA 391 (690)
T ss_dssp CCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHH
T ss_pred CCCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHHHHHHHHhcCCccCCHHHhcchhhhhhHHHHH
Confidence 67899999999777789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccCCccccccccCchhHHHHHHHHHhccccCCcCCccHHhhhcccccCCCccCCCCCCccccccccCCccchhh
Q 002417 621 LARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADG 700 (926)
Q Consensus 621 lAR~~LI~~gGiie~~f~~G~~~~elss~~Yk~~w~f~~~~LP~DL~~~~~~~RG~a~~D~~~p~gl~l~l~dYpYrdDG 700 (926)
+||++|||+||++|++|++|+++|||++++|++ |+|++++||+||++ |||+++|+++|||++|.||||||||||
T Consensus 392 ~AR~~LI~~gGiie~~~~~~~~~~el~~~ayk~-w~f~~~~lP~dL~~-----RGv~~~d~~~p~g~~l~ipdYPYrdDg 465 (690)
T d3bnea1 392 LARQSLINANGIAETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADG 465 (690)
T ss_dssp HHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGGSHHHHHHH-----TTSEEECTTSTTSEEESSSSCHHHHHH
T ss_pred HHHHhccCCCCeeeecccCchhHHHHHHHHHhc-CcccccCCHHHHHH-----cCCCcccccccccccccCCCCchhhhH
Confidence 999999999999999999999999999999998 99999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcccccCcccccCCCHHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccc
Q 002417 701 LLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAIN 780 (926)
Q Consensus 701 L~IW~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~IIf~aSaqHAAVN 780 (926)
|+||+||++||++||++||++|++|++|.|||+||+||+++|||++++.+|||+|+|+++||++||+|||+||+||||||
T Consensus 466 L~iW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVN 545 (690)
T d3bnea1 466 LEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVN 545 (690)
T ss_dssp HHHHHHHHHHHHHHGGGTCSSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTSCCCCSHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCccccccCHHHHHHHHHHhcccCCCCCCCCCCCCCCCHHHHHHHHHHHHhhccHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccccCCcccccccCCCCCCChhhhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCcccccccccCCCC
Q 002417 781 FGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHW 860 (926)
Q Consensus 781 fgQy~y~gfvPN~P~~lr~p~P~~g~~e~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~yLG~~~~~~~~~ 860 (926)
||||+|+||+||+|++||++||+++++++++++.+||+++|++||++.||+.+|+++++||+|++||+|||+|++ +.|
T Consensus 546 fgQy~y~gfvPN~P~~~r~~~P~~~~~~~~~~~~~~e~~~L~tLP~~~qa~~~~~~~~~LS~~~~de~yLG~~~~--~~~ 623 (690)
T d3bnea1 546 FGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDN--PHW 623 (690)
T ss_dssp TTHHHHHSSTTTSCCCBCCCCCCTTSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSC--TTS
T ss_pred cccccccCcCCCCChHhcCCCCCCCChhhhhhhhchHHHHHHhCCcHHHHHHHHHHHHHhccCCCCcccCCCCCC--ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988 799
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhhccccccc-cccCCCCCCceeecCCCCCCCccCCcCccccC
Q 002417 861 INDPEVLNMFDKFSANLEEIEKIINTRNKDFRLK-GRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926 (926)
Q Consensus 861 ~~d~~~~~A~~~F~~~L~~Ie~~I~~RN~~~~lk-nr~g~~~~PY~~L~Pss~~g~t~~gIPNSIsI 926 (926)
+.|+++++|+++|+++|++||++|++||+++++| ||+||+++||+||+|+++||||||||||||||
T Consensus 624 ~~D~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~~~nr~g~~~~PY~~L~Ps~~~g~t~~gIPnSIsI 690 (690)
T d3bnea1 624 TSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690 (690)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCCCCCCCccccCCCCCCCcCcCCCCCcccC
Confidence 9999999999999999999999999999999999 99999999999999999999999999999998
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} | Back information, alignment and structure |
|---|
| >d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} | Back information, alignment and structure |
|---|
| >d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|