Citrus Sinensis ID: 002418
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 925 | 2.2.26 [Sep-21-2011] | |||||||
| P93831 | 902 | Histone-lysine N-methyltr | yes | no | 0.955 | 0.980 | 0.638 | 0.0 | |
| Q8S4P6 | 931 | Histone-lysine N-methyltr | N/A | no | 0.939 | 0.933 | 0.608 | 0.0 | |
| Q8S4P4 | 895 | Histone-lysine N-methyltr | N/A | no | 0.895 | 0.925 | 0.478 | 0.0 | |
| Q9ZSM8 | 856 | Histone-lysine N-methyltr | no | no | 0.389 | 0.420 | 0.689 | 1e-149 | |
| Q8S4P5 | 894 | Histone-lysine N-methyltr | N/A | no | 0.427 | 0.441 | 0.638 | 1e-144 | |
| O65312 | 689 | Histone-lysine N-methyltr | no | no | 0.355 | 0.477 | 0.505 | 1e-100 | |
| A7E2Z2 | 747 | Histone-lysine N-methyltr | yes | no | 0.321 | 0.397 | 0.434 | 8e-68 | |
| Q92800 | 747 | Histone-lysine N-methyltr | yes | no | 0.321 | 0.397 | 0.428 | 1e-67 | |
| P70351 | 747 | Histone-lysine N-methyltr | yes | no | 0.321 | 0.397 | 0.426 | 2e-67 | |
| Q5RDS6 | 747 | Histone-lysine N-methyltr | yes | no | 0.321 | 0.397 | 0.428 | 4e-67 |
| >sp|P93831|CLF_ARATH Histone-lysine N-methyltransferase CLF OS=Arabidopsis thaliana GN=CLF PE=1 SV=2 | Back alignment and function desciption |
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Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/919 (63%), Positives = 686/919 (74%), Gaps = 35/919 (3%)
Query: 13 RSEPLKSSSLTKTENGTLTRKEILSVIDCLKNQVAADHFVSVQRRVEKNRQKLIGVTNHL 72
RSEP K S E KE+ VI+ LK ++AAD +S+++R+++N++ L +T
Sbjct: 13 RSEPPKDSP---AEERGPASKEVSEVIESLKKKLAADRCISIKKRIDENKKNLFAITQSF 69
Query: 73 YRLSLERRNNQTINTHGSVDLLTKRQREALGVQNGIDVSSGDRDSHISQEDGYASTA-VY 131
R S+ER + DLL KRQR++ G+++GID S+ +R EDG AS+ V
Sbjct: 70 MRSSMERGGS----CKDGSDLLVKRQRDSPGMKSGIDESNNNR----YVEDGPASSGMVQ 121
Query: 132 GSSNPTKNIIRPIKLNDNKRLPPYTTWIFLDRNQRMTEDQSVMSRRRIYYDQNGGEALIC 191
GSS P K +RPIK+ D KRL PYTTW+FLDRNQRMTEDQSV+ RRRIYYDQ GGEALIC
Sbjct: 122 GSSVPVKISLRPIKMPDIKRLSPYTTWVFLDRNQRMTEDQSVVGRRRIYYDQTGGEALIC 181
Query: 192 SDSEEEVIEEEE-KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFSRSPSEVKARYEIL 250
SDSEEE I++EE K+DF++ EDYI+RMT++++GLSD+ L LA SRS SE+KAR+ +L
Sbjct: 182 SDSEEEAIDDEEEKRDFLEPEDYIIRMTLEQLGLSDSVLAELASFLSRSTSEIKARHGVL 241
Query: 251 SKEESAVGGSNNGNDEHTMNNFLVKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPA 310
KE+ + D ++ L KD+E ALDSFDNLFCRRCLVFDCRLHGCSQDL+FPA
Sbjct: 242 MKEKEV----SESGDNQAESSLLNKDMEGALDSFDNLFCRRCLVFDCRLHGCSQDLIFPA 297
Query: 311 EKQPLWYHLDEGNVPCGPHCYRSVLKSERNATACSPLNGDIKEKFISSSDGAGAQTSSRK 370
EK W + N+ CG +CY+++LKS R P G I+ K +SSDGAG +T+ K
Sbjct: 298 EKPAPWCPPVDENLTCGANCYKTLLKSGR-----FPGYGTIEGKTGTSSDGAGTKTTPTK 352
Query: 371 ---KFSGPARRVKSHQSESASSNAKNLSESSDSEVGQRQDTAFTHHSSPSKSKLVGKVGI 427
K +G R+ K+ SESASSN K E+SDSE G +QDT SS K K G+
Sbjct: 353 FSSKLNG--RKPKTFPSESASSNEKCALETSDSENGLQQDTNSDKVSSSPKVKGSGRRVG 410
Query: 428 CKRKSKRVAERALVCKQKKQKKMAAFDLDSVASGGVLPSDMKLRSTSRKENEDANSSSHK 487
KR RVAER QK+QKK A D DS+ASG PSD K K+NEDA SSS K
Sbjct: 411 RKRNKNRVAERVPRKTQKRQKKTEASDSDSIASGSCSPSDAK-----HKDNEDATSSSQK 465
Query: 488 HAKSSSSGKTRKKEMQIQDSRNLMHVRVPLGSSQEIVSNPPAISTNDSLRKDEFVAENMC 547
H KS +SGK+RK + S N + VP+ S E+ S A +++SLRK+EF+ E +
Sbjct: 466 HVKSGNSGKSRKNGTPAEVSNNSVKDDVPVCQSNEVASELDAPGSDESLRKEEFMGETVS 525
Query: 548 KQELSDEKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMTCSENKLFCQ 607
+ L+ K W+ +EK LFDKGVEIFG NSCLIARNLL+G K+CWEVFQYMTCSENK
Sbjct: 526 RGRLATNKLWRPLEKSLFDKGVEIFGMNSCLIARNLLSGFKSCWEVFQYMTCSENKASFF 585
Query: 608 AGDAATSLLEGYSKFDFNGTTGNNEVRRRSRYLRRRGRVRRLKYTWKSAAYHSIRKRITE 667
GD +G SKFD NG NN+VRRRSR+LRRRG+VRRLKYTWKSAAYHSIRKRITE
Sbjct: 586 GGDGLNP--DGSSKFDINGNMVNNQVRRRSRFLRRRGKVRRLKYTWKSAAYHSIRKRITE 643
Query: 668 RKDQPCRQYNPCGCQTACGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQC 727
+KDQPCRQ+NPC C+ ACGK+CPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQC
Sbjct: 644 KKDQPCRQFNPCNCKIACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQC 703
Query: 728 PCFAADRECDPDVCRNCWISCGDGSLGVPDQKGDNYECRNMKLLLKQQQRVLLGRSDVSG 787
PCFAADRECDPDVCRNCW+ GDGSLGVP Q+GDNYECRNMKLLLKQQQRVLLG SDVSG
Sbjct: 704 PCFAADRECDPDVCRNCWVIGGDGSLGVPSQRGDNYECRNMKLLLKQQQRVLLGISDVSG 763
Query: 788 WGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDK 847
WGAFLKNSV KHEYLGEYTGELISH+EADKRGKIYDREN SFLFNLNDQFVLDAYRKGDK
Sbjct: 764 WGAFLKNSVSKHEYLGEYTGELISHKEADKRGKIYDRENCSFLFNLNDQFVLDAYRKGDK 823
Query: 848 LKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEAS 907
LKFANHSP+PNCYAKVIMVAGDHRVGIFAKERI AGEELFYDYRYEPDRAPAWA+KPEA
Sbjct: 824 LKFANHSPEPNCYAKVIMVAGDHRVGIFAKERILAGEELFYDYRYEPDRAPAWAKKPEAP 883
Query: 908 GSKKEEG-GPSSGRAKKLA 925
GSKK+E PS GR KKLA
Sbjct: 884 GSKKDENVTPSVGRPKKLA 902
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Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes. Required to regulate floral development by repressing the AGAMOUS homeotic gene in leaves, influorescence stems and flowers. Regulates the antero-posterior organization of the endosperm, as well as the division and elongation rates of leaf cells. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3 |
| >sp|Q8S4P6|EZ1_MAIZE Histone-lysine N-methyltransferase EZ1 OS=Zea mays GN=EZ1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8S4P4|EZ3_MAIZE Histone-lysine N-methyltransferase EZ3 OS=Zea mays GN=EZ3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1 OS=Arabidopsis thaliana GN=EZA1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8S4P5|EZ2_MAIZE Histone-lysine N-methyltransferase EZ2 OS=Zea mays GN=EZ2 PE=2 SV=1 | Back alignment and function description |
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| >sp|O65312|MEDEA_ARATH Histone-lysine N-methyltransferase MEDEA OS=Arabidopsis thaliana GN=MEA PE=1 SV=1 | Back alignment and function description |
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| >sp|A7E2Z2|EZH1_BOVIN Histone-lysine N-methyltransferase EZH1 OS=Bos taurus GN=EZH1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q92800|EZH1_HUMAN Histone-lysine N-methyltransferase EZH1 OS=Homo sapiens GN=EZH1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P70351|EZH1_MOUSE Histone-lysine N-methyltransferase EZH1 OS=Mus musculus GN=Ezh1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5RDS6|EZH1_PONAB Histone-lysine N-methyltransferase EZH1 OS=Pongo abelii GN=EZH1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 925 | ||||||
| 224084364 | 917 | SET domain protein [Populus trichocarpa] | 0.968 | 0.977 | 0.741 | 0.0 | |
| 224094296 | 892 | SET domain protein [Populus trichocarpa] | 0.954 | 0.989 | 0.752 | 0.0 | |
| 225438762 | 950 | PREDICTED: histone-lysine N-methyltransf | 0.962 | 0.936 | 0.752 | 0.0 | |
| 296082393 | 934 | unnamed protein product [Vitis vinifera] | 0.962 | 0.952 | 0.752 | 0.0 | |
| 449463949 | 927 | PREDICTED: LOW QUALITY PROTEIN: histone- | 0.993 | 0.991 | 0.719 | 0.0 | |
| 356540672 | 869 | PREDICTED: histone-lysine N-methyltransf | 0.909 | 0.967 | 0.683 | 0.0 | |
| 374306302 | 897 | CLF-like protein [Aquilegia coerulea] | 0.958 | 0.988 | 0.656 | 0.0 | |
| 357482819 | 870 | Histone-lysine N-methyltransferase CLF [ | 0.909 | 0.966 | 0.672 | 0.0 | |
| 34393748 | 922 | PHCLF1 [Petunia x hybrida] | 0.967 | 0.970 | 0.654 | 0.0 | |
| 350536571 | 921 | EZ2 protein [Solanum lycopersicum] gi|15 | 0.989 | 0.993 | 0.645 | 0.0 |
| >gi|224084364|ref|XP_002307273.1| SET domain protein [Populus trichocarpa] gi|222856722|gb|EEE94269.1| SET domain protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1316 bits (3407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/919 (74%), Positives = 762/919 (82%), Gaps = 23/919 (2%)
Query: 13 RSEPLKSSSLTKT-ENGTLTRKEILSVIDCLKNQVAADHFVSVQRRVEKNRQKLIGVTNH 71
RSEP K S + K+ ++ TL +E+L VI+ LK QVAAD + V +R+E+NRQKL+G+TNH
Sbjct: 16 RSEPPKDSPMIKSNQDTTLASEEVLLVIESLKKQVAADRCIYVMKRMEENRQKLVGITNH 75
Query: 72 LYRLSLERRNNQTINTHGSVDLLTKRQREALGVQNGIDVSSGDRDSHISQEDGYASTAVY 131
L +LS ER+NN T S+DL TKRQ +AL + GID ++ D+DSH S+EDG+ASTAV
Sbjct: 76 LDKLSKERKNNWISGTDNSIDLFTKRQNDALSMHGGIDSTNVDKDSHGSEEDGHASTAVL 135
Query: 132 -GSSNPTKNIIRPIKLNDNKRLPPYTTWIFLDRNQRMTEDQSVMSRRRIYYDQNGGEALI 190
GSS P KN +RPIKL + RLPPYT+W+FLDRNQRMTEDQSV+ RRRIYYDQNGGEALI
Sbjct: 136 LGSSIPVKNAVRPIKLPEVNRLPPYTSWVFLDRNQRMTEDQSVVGRRRIYYDQNGGEALI 195
Query: 191 CSDSEEEVIEEEE-KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFSRSPSEVKARYEI 249
CSDSEEE+I+EEE K+ FV+SEDYILRMTIKE G SD +ESLA CFSRSPSEVKAR+E+
Sbjct: 196 CSDSEEEIIDEEEAKRYFVESEDYILRMTIKEAGSSDPVVESLAHCFSRSPSEVKARFEV 255
Query: 250 LSKEESAVGGSNNGNDE-HTMNNFLVKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVF 308
L KEE AV S N + E T+N+FLVKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDL+F
Sbjct: 256 LKKEEKAVEDSKNKDIEAQTLNSFLVKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLIF 315
Query: 309 PAEKQPLWYHLDEGNVPCGPHCYRSVLKSERNATACSPLNGDIKEKFISSSDGAGAQTSS 368
AEKQ W + E N+ CG HCY+ L+G I+E I SDGA SS
Sbjct: 316 LAEKQSPWSY-PEDNITCGSHCYK--------------LHGVIEENSICQSDGARVPISS 360
Query: 369 RKKFSGPA--RRVKSHQSESASSNAKNLSESSDSEVGQRQDTAFTHHSSPSKSKLVGKVG 426
RKK S + R VKS QSESASSNAKN+SESSDSE+G QDT+ T SPSKS LVGK G
Sbjct: 361 RKKTSASSARRNVKSCQSESASSNAKNISESSDSEIGPHQDTSPTSQISPSKSMLVGKGG 420
Query: 427 ICKRKSKRVAERALVCKQKKQKKMAAFDLDSVASGGVLPSDMKLRSTSRKENEDANSSSH 486
CKR SKRVAER L C +K+QKKM A D DSVASGG+L D+K RSTS K EDA SSSH
Sbjct: 421 TCKRNSKRVAERVLSCMRKRQKKMVASDSDSVASGGLLSIDLKRRSTSHKGKEDA-SSSH 479
Query: 487 KHAKSSSSGKTRKKEMQIQDSRNLMHVRVPLGSSQEIVSNPPAISTNDSLRKDEFVAENM 546
K+AKS + ++R+KE+ QDS NL+ G S E+V+NPP S++D+LRK+EF+ E+
Sbjct: 480 KNAKSPTIARSRRKELMNQDSHNLVQGEFHDGLSSEMVANPPVTSSDDTLRKEEFIDEHK 539
Query: 547 CKQELSDEKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMTCSENKLFC 606
CK+ELSD++SWK IEKGLF+KGVEIFG NSCLIARNLLNGLKTCWEVFQYMT SEN+ C
Sbjct: 540 CKKELSDDRSWKAIEKGLFEKGVEIFGGNSCLIARNLLNGLKTCWEVFQYMTRSENRPAC 599
Query: 607 QAGDAATSLLEGYSKFDFNGTTGNNEVRRRSRYLRRRGRVRRLKYTWKSAAYHSIRKRIT 666
+AGDA T L EGYSKFDFNGT NE RRRSR+LRRR +VRRLKY+WKS AYHS RKRIT
Sbjct: 600 EAGDAGT-LGEGYSKFDFNGTMVKNEARRRSRFLRRRSKVRRLKYSWKSTAYHSFRKRIT 658
Query: 667 ERKDQPCRQYNPCGCQTACGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQ 726
ERKDQPCRQYNPC CQTACGKQC CLLNGTCCEKYC CPKSCKNRFRGCHCAKSQCRSRQ
Sbjct: 659 ERKDQPCRQYNPCSCQTACGKQCTCLLNGTCCEKYCRCPKSCKNRFRGCHCAKSQCRSRQ 718
Query: 727 CPCFAADRECDPDVCRNCWISCGDGSLGVPDQKGDNYECRNMKLLLKQQQRVLLGRSDVS 786
CPCFAADRECDPDVCRNCWISCGDG+LG+P Q+GDNYECRNMKLLLKQQQRVLLGRSDVS
Sbjct: 719 CPCFAADRECDPDVCRNCWISCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVS 778
Query: 787 GWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGD 846
GWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGD
Sbjct: 779 GWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGD 838
Query: 847 KLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEA 906
KLKFANHSPDPNCYAKVIMV GDHRVGIFAKERI+AGEELFYDYRYEPDRAPAWARKPEA
Sbjct: 839 KLKFANHSPDPNCYAKVIMVTGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEA 898
Query: 907 SGSKKEEGGPSSGRAKKLA 925
SGSKKE+GG SSGRAKKLA
Sbjct: 899 SGSKKEDGGHSSGRAKKLA 917
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224094296|ref|XP_002310129.1| SET domain protein [Populus trichocarpa] gi|222853032|gb|EEE90579.1| SET domain protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225438762|ref|XP_002278164.1| PREDICTED: histone-lysine N-methyltransferase CLF-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296082393|emb|CBI21398.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449463949|ref|XP_004149692.1| PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase CLF-like [Cucumis sativus] gi|449508283|ref|XP_004163272.1| PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase CLF-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356540672|ref|XP_003538810.1| PREDICTED: histone-lysine N-methyltransferase CLF-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|374306302|gb|AEZ06400.1| CLF-like protein [Aquilegia coerulea] | Back alignment and taxonomy information |
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| >gi|357482819|ref|XP_003611696.1| Histone-lysine N-methyltransferase CLF [Medicago truncatula] gi|355513031|gb|AES94654.1| Histone-lysine N-methyltransferase CLF [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|34393748|dbj|BAC84950.1| PHCLF1 [Petunia x hybrida] | Back alignment and taxonomy information |
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| >gi|350536571|ref|NP_001234765.1| EZ2 protein [Solanum lycopersicum] gi|156789074|gb|ABU96078.1| EZ2 [Solanum lycopersicum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 925 | ||||||
| TAIR|locus:2005501 | 902 | CLF "CURLY LEAF" [Arabidopsis | 0.837 | 0.859 | 0.63 | 2.9e-261 | |
| TAIR|locus:2132178 | 856 | SWN "SWINGER" [Arabidopsis tha | 0.368 | 0.398 | 0.673 | 5.6e-180 | |
| TAIR|locus:2196110 | 689 | MEA "MEDEA" [Arabidopsis thali | 0.316 | 0.425 | 0.491 | 3.3e-98 | |
| UNIPROTKB|A7E2Z2 | 747 | EZH1 "Histone-lysine N-methylt | 0.238 | 0.295 | 0.525 | 4.1e-81 | |
| UNIPROTKB|E1BD02 | 751 | EZH2 "Uncharacterized protein" | 0.224 | 0.276 | 0.532 | 3.5e-80 | |
| UNIPROTKB|E2R6Q2 | 751 | EZH2 "Uncharacterized protein" | 0.224 | 0.276 | 0.532 | 5e-79 | |
| UNIPROTKB|E1C0W5 | 761 | EZH2 "Uncharacterized protein" | 0.224 | 0.273 | 0.532 | 6.4e-79 | |
| UNIPROTKB|Q28D84 | 748 | ezh2 "Histone-lysine N-methylt | 0.224 | 0.278 | 0.532 | 8.1e-79 | |
| UNIPROTKB|F1NBM3 | 749 | EZH1 "Uncharacterized protein" | 0.238 | 0.295 | 0.534 | 1.7e-78 | |
| UNIPROTKB|F1PG04 | 750 | EZH1 "Uncharacterized protein" | 0.238 | 0.294 | 0.525 | 2.1e-78 |
| TAIR|locus:2005501 CLF "CURLY LEAF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2514 (890.0 bits), Expect = 2.9e-261, P = 2.9e-261
Identities = 504/800 (63%), Positives = 578/800 (72%)
Query: 110 VSSGDRDSHISQ--EDGYASTA-VYGSSNPTKNIIRPIKLNDNKRLPPYTTWIFLDRNQR 166
+ SG +S+ ++ EDG AS+ V GSS P K +RPIK+ D KRL PYTTW+FLDRNQR
Sbjct: 97 MKSGIDESNNNRYVEDGPASSGMVQGSSVPVKISLRPIKMPDIKRLSPYTTWVFLDRNQR 156
Query: 167 MTEDQSVMSRRRIYYDQNGGEALICSDSXXXXXXXXX-KKDFVDSEDYILRMTIKEVGLS 225
MTEDQSV+ RRRIYYDQ GGEALICSDS K+DF++ EDYI+RMT++++GLS
Sbjct: 157 MTEDQSVVGRRRIYYDQTGGEALICSDSEEEAIDDEEEKRDFLEPEDYIIRMTLEQLGLS 216
Query: 226 DATLESLAQCFSRSPSEVKARYEILSKEESAVGGSNNGNDEHTMNNFLVKDLEAALDSFD 285
D+ L LA SRS SE+KAR+ +L KE+ S +G D ++ L KD+E ALDSFD
Sbjct: 217 DSVLAELASFLSRSTSEIKARHGVLMKEKEV---SESG-DNQAESSLLNKDMEGALDSFD 272
Query: 286 NLFCRRCLVFDCRLHGCSQDLVFPAEKQPLWYHLDEGNVPCGPHCYRSVLKSERNATACS 345
NLFCRRCLVFDCRLHGCSQDL+FPAEK W + N+ CG +CY+++LKS R
Sbjct: 273 NLFCRRCLVFDCRLHGCSQDLIFPAEKPAPWCPPVDENLTCGANCYKTLLKSGR-----F 327
Query: 346 PLNGDIKEKFISSSDGAGAQTSSRKKFSGP--ARRVKSHQSESASSNAKNLSESSDSEVG 403
P G I+ K +SSDGAG +T+ K FS R+ K+ SESASSN K E+SDSE G
Sbjct: 328 PGYGTIEGKTGTSSDGAGTKTTPTK-FSSKLNGRKPKTFPSESASSNEKCALETSDSENG 386
Query: 404 QRQDTAFTHHSSPSKSKLVGK-VGICKRKSKRVAERALVCKQKKQKKMAAFDLDSVASGG 462
+QDT SS K K G+ VG KR RVAER QK+QKK A D DS+ASG
Sbjct: 387 LQQDTNSDKVSSSPKVKGSGRRVGR-KRNKNRVAERVPRKTQKRQKKTEASDSDSIASGS 445
Query: 463 VLPSDMKLRSTSRKENEDANXXXXXXXXXXXXGKTRKKEMQIQDSRNLMHVRVPLGSSQE 522
PSD K K+NEDA GK+RK + S N + VP+ S E
Sbjct: 446 CSPSDAK-----HKDNEDATSSSQKHVKSGNSGKSRKNGTPAEVSNNSVKDDVPVCQSNE 500
Query: 523 IVSNPPAISTNDSLRKDEFVAENMCKQELSDEKSWKTIEKGLFDKGVEIFGRNSCLIARN 582
+ S A +++SLRK+EF+ E + + L+ K W+ +EK LFDKGVEIFG NSCLIARN
Sbjct: 501 VASELDAPGSDESLRKEEFMGETVSRGRLATNKLWRPLEKSLFDKGVEIFGMNSCLIARN 560
Query: 583 LLNGLKTCWEVFQYMTCSENKLFCQAGDAATSLLEGYSKFDFNGTTGNNEVXXXXXXXXX 642
LL+G K+CWEVFQYMTCSENK GD +G SKFD NG NN+V
Sbjct: 561 LLSGFKSCWEVFQYMTCSENKASFFGGDGLNP--DGSSKFDINGNMVNNQVRRRSRFLRR 618
Query: 643 XXXXXXLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQTACGKQCPCLLNGTCCEKYC 702
LKYTWKSAAYHSIRKRITE+KDQPCRQ+NPC C+ ACGK+CPCLLNGTCCEKYC
Sbjct: 619 RGKVRRLKYTWKSAAYHSIRKRITEKKDQPCRQFNPCNCKIACGKECPCLLNGTCCEKYC 678
Query: 703 GCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWISCGDGSLGVPDQKGDN 762
GCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCW+ GDGSLGVP Q+GDN
Sbjct: 679 GCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVIGGDGSLGVPSQRGDN 738
Query: 763 YECRNMXXXXXXXXRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIY 822
YECRNM RVLLG SDVSGWGAFLKNSV KHEYLGEYTGELISH+EADKRGKIY
Sbjct: 739 YECRNMKLLLKQQQRVLLGISDVSGWGAFLKNSVSKHEYLGEYTGELISHKEADKRGKIY 798
Query: 823 DRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISA 882
DREN SFLFNLNDQFVLDAYRKGDKLKFANHSP+PNCYAKVIMVAGDHRVGIFAKERI A
Sbjct: 799 DRENCSFLFNLNDQFVLDAYRKGDKLKFANHSPEPNCYAKVIMVAGDHRVGIFAKERILA 858
Query: 883 GEELFYDYRYEPDRAPAWAR 902
GEELFYDYRYEPDRAPAWA+
Sbjct: 859 GEELFYDYRYEPDRAPAWAK 878
|
|
| TAIR|locus:2132178 SWN "SWINGER" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2196110 MEA "MEDEA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A7E2Z2 EZH1 "Histone-lysine N-methyltransferase EZH1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BD02 EZH2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2R6Q2 EZH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C0W5 EZH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q28D84 ezh2 "Histone-lysine N-methyltransferase EZH2" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NBM3 EZH1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PG04 EZH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P93831 | CLF_ARATH | 2, ., 1, ., 1, ., 4, 3 | 0.6387 | 0.9556 | 0.9800 | yes | no |
| Q8S4P6 | EZ1_MAIZE | 2, ., 1, ., 1, ., 4, 3 | 0.6084 | 0.9394 | 0.9334 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.1.1.43 | 0.991 |
| 3rd Layer | 2.1.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | SDG916 | SET domain protein (917 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | PGE901 | • | • | 0.413 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 925 | |||
| smart00317 | 124 | smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest | 1e-35 | |
| pfam00856 | 113 | pfam00856, SET, SET domain | 1e-24 | |
| COG2940 | 480 | COG2940, COG2940, Proteins containing SET domain [ | 2e-13 |
| >gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 1e-35
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Query: 777 RVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDREN--SSFLFNLN 834
++ + +S GWG + K E++GEY GE+I+ EA++R K YD + + +LF+++
Sbjct: 2 KLEVFKSPGKGWGVRATEDIPKGEFIGEYVGEIITSEEAEERPKAYDTDGAKAFYLFDID 61
Query: 835 DQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYE 893
+DA RKG+ +F NHS +PNC + V GD R+ IFA I GEEL DY +
Sbjct: 62 SDLCIDARRKGNLARFINHSCEPNCELLFVEVNGDDRIVIFALRDIKPGEELTIDYGSD 120
|
Putative methyl transferase, based on outlier plant homologues. Length = 124 |
| >gnl|CDD|216155 pfam00856, SET, SET domain | Back alignment and domain information |
|---|
| >gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 925 | |||
| KOG1079 | 739 | consensus Transcriptional repressor EZH1 [Transcri | 100.0 | |
| KOG4442 | 729 | consensus Clathrin coat binding protein/Huntingtin | 100.0 | |
| KOG1080 | 1005 | consensus Histone H3 (Lys4) methyltransferase comp | 99.97 | |
| KOG1082 | 364 | consensus Histone H3 (Lys9) methyltransferase SUV3 | 99.95 | |
| smart00317 | 116 | SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) | 99.9 | |
| KOG1083 | 1306 | consensus Putative transcription factor ASH1/LIN-5 | 99.89 | |
| KOG1085 | 392 | consensus Predicted methyltransferase (contains a | 99.72 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 99.71 | |
| COG2940 | 480 | Proteins containing SET domain [General function p | 99.61 | |
| PF00856 | 162 | SET: SET domain; InterPro: IPR001214 The SET domai | 99.49 | |
| KOG1081 | 463 | consensus Transcription factor NSD1 and related SE | 98.95 | |
| KOG2589 | 453 | consensus Histone tail methylase [Chromatin struct | 98.52 | |
| KOG2461 | 396 | consensus Transcription factor BLIMP-1/PRDI-BF1, c | 98.05 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 97.55 | |
| KOG1079 | 739 | consensus Transcriptional repressor EZH1 [Transcri | 97.2 | |
| PF00249 | 48 | Myb_DNA-binding: Myb-like DNA-binding domain; Inte | 92.11 | |
| smart00717 | 49 | SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bindi | 91.71 | |
| cd00167 | 45 | SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding do | 91.47 | |
| smart00570 | 51 | AWS associated with SET domains. subdomain of PRES | 90.97 | |
| smart00717 | 49 | SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bindi | 90.82 | |
| PF13921 | 60 | Myb_DNA-bind_6: Myb-like DNA-binding domain; PDB: | 90.05 | |
| PF05033 | 103 | Pre-SET: Pre-SET motif; InterPro: IPR007728 This r | 89.89 | |
| cd00167 | 45 | SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding do | 86.45 | |
| KOG1171 | 406 | consensus Metallothionein-like protein [Inorganic | 80.29 |
| >KOG1079 consensus Transcriptional repressor EZH1 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-121 Score=1032.97 Aligned_cols=682 Identities=38% Similarity=0.562 Sum_probs=535.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhHhHhhhhhcccccccCCCcchhhhHHhhhhcccccCcCCCCCCCCCccccccCc
Q 002418 46 VAADHFVSVQRRVEKNRQKLIGVTNHLYRLSLERRNNQTINTHGSVDLLTKRQREALGVQNGIDVSSGDRDSHISQEDGY 125 (925)
Q Consensus 46 i~~~R~~~ik~~~e~n~~~l~~~t~~~~~~~~~r~~~~~~~~~~~~~~ls~R~~~pl~~~~g~~~~~~~~~~~~~~d~~~ 125 (925)
++..++.+++++...+|.+...+|+.+- ++..+..... -+.+.++..+..-|++++|++..+..+.+...+-++
T Consensus 52 ~~~~~~~~~~~~~~~~r~k~~~~~~~~~-~~~~~~~i~~---~n~~~~v~~~~~~~~~q~nfmv~~~~~~~~ip~~~~-- 125 (739)
T KOG1079|consen 52 RRLKPVRSAKEVDGDIRVKVDLDTSIFD-FPSQKSPINE---LNAVAQVPIMYSWPPLQQNFMVEDETVLHNIPYMGD-- 125 (739)
T ss_pred hhcccccccccccccccccccccccccc-Ccccccchhh---hcccccccccccCChhhhcceecccceecccccccc--
Confidence 7777777888888888888888888874 5555554322 224578888999999999999887777655543322
Q ss_pred cccccccCCCCCccccccccccCCCCCCCCceeeeecccccccccccccccccceecCCCCeeEeecCchhhhhhhhhhc
Q 002418 126 ASTAVYGSSNPTKNIIRPIKLNDNKRLPPYTTWIFLDRNQRMTEDQSVMSRRRIYYDQNGGEALICSDSEEEVIEEEEKK 205 (925)
Q Consensus 126 ~~~~v~~~~~~~~~~~~~~~lp~v~~~P~yttW~~l~rn~rM~edqsv~grR~IyyD~~g~Ealicsdseee~~eee~k~ 205 (925)
. |+.|++|.++.|++|++|||+||||||++||+|||+|+||| |.|+|++| ||+|||.+.+|+|+
T Consensus 126 ---~-----------v~~~k~~~ieel~~y~~~v~~dr~~~~~~d~v~ve~~~a~~-Q~~~e~dg-~D~~~e~~~~~ekr 189 (739)
T KOG1079|consen 126 ---E-----------VLDIKGPFIEELIKYDGKVHGDRNQRFMEDQVFVELVVALY-QYGGEHDG-SDDEEEEVLEEEKR 189 (739)
T ss_pred ---c-----------ccccccchhhhcccccceeeccccccchhhhhHHHHHHHHH-hcCCcccc-CCCccccchhhhcc
Confidence 1 35599999999999999999999999999999999999999 99999999 99999965599999
Q ss_pred ccCCccch-hhhhhhhhcCCcHHHHHHHHhhcC--CChhHHHHHHHHhhhccccCCCCCCCCCCccccchhhhc-HHHHh
Q 002418 206 DFVDSEDY-ILRMTIKEVGLSDATLESLAQCFS--RSPSEVKARYEILSKEESAVGGSNNGNDEHTMNNFLVKD-LEAAL 281 (925)
Q Consensus 206 ~f~~~ed~-~~~~~~~e~g~s~~vl~~~~~~~~--~~~sei~ery~~l~~~~~~~~~~~~~~~~~~~~~~l~k~-l~~al 281 (925)
+|.+++|. ++|++.+.++++++||++|+++|. +++++|+|||.+|+....+...... .-....++.|++. ++++|
T Consensus 190 ~~~e~~~~~~~~~~~~~~~~~~~if~~~~~~f~~k~~~~~lke~~~~l~~~~~p~~~e~~-~~~~id~~~ae~~~r~~~l 268 (739)
T KOG1079|consen 190 DFLEGEDDDIIESINKLSFPADKIFQAISSMFPDKLTASELKERYGELTSKSLPVAEEPE-CTPNIDGSSAEPVQREQAL 268 (739)
T ss_pred cccCcccchhhHhhhhhccchHHHHHHHhhhcccccchhhhhHHHhhhhhccccccCCcc-cccCCCccccChHHHHhhh
Confidence 99999999 899999999999999999999999 9999999999999965555433221 0112235566666 99999
Q ss_pred hhcccccccccccccccCcCCCCCccccCCCCCCCCCCCCCCCCCcccchhhccccccccccCCCCCCCcccccccCCCC
Q 002418 282 DSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPLWYHLDEGNVPCGPHCYRSVLKSERNATACSPLNGDIKEKFISSSDG 361 (925)
Q Consensus 282 dsfdnlfCRRClvfDC~lHgcsq~lI~~~ekq~~~~~~~~d~~pCg~~Cy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (925)
||||||||||||+|||+||| +|+++||.++...|.++..+..|||+.||..+.+..+.. .+.+
T Consensus 269 ~sF~tlfCrrCl~ydC~lHg-~~~~~~pn~~~r~e~~~a~~~~pc~p~~~~~l~~~~~~~----------------m~~~ 331 (739)
T KOG1079|consen 269 HSFHTLFCRRCLKYDCFLHG-SQFHAFPNTKKRKEDEPALENEPCGPGCYGLLEGAKEKT----------------MSAV 331 (739)
T ss_pred cccccceeeeeeeeeccccC-ccccccccccccCCCCccccccCCCCchhhhhhccchhh----------------hhcc
Confidence 99999999999999999999 999999999999999999999999999999985433210 0000
Q ss_pred CCCccCCccccCCCcccccccccccccccccccCCCCccccccCCCccccccCCCCccccccccccccccchhHHHHHHH
Q 002418 362 AGAQTSSRKKFSGPARRVKSHQSESASSNAKNLSESSDSEVGQRQDTAFTHHSSPSKSKLVGKVGICKRKSKRVAERALV 441 (925)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 441 (925)
. .+.++..|.
T Consensus 332 ~--------------------------------------------------------~~~~p~~g~-------------- 341 (739)
T KOG1079|consen 332 V--------------------------------------------------------SKCPPIRGD-------------- 341 (739)
T ss_pred c--------------------------------------------------------ccCCCCcch--------------
Confidence 0 000000000
Q ss_pred HHHHhhhhhhccccccccCCCCCCccccccccccccccccCCCcccCCCCCCCccccccchhhcccccccccccCCCCCc
Q 002418 442 CKQKKQKKMAAFDLDSVASGGVLPSDMKLRSTSRKENEDANSSSHKHAKSSSSGKTRKKEMQIQDSRNLMHVRVPLGSSQ 521 (925)
Q Consensus 442 ~~~k~~~~~~~~~~~s~~~~~~~~~d~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 521 (925)
++||--.+++.+|- +.+...++.+..+......+..+.. |.+.+
T Consensus 342 ---~~qk~~~~~~~~s~--------------~~~~~~e~~g~~~d~~v~~~~~~~~-----------~~v~~-------- 385 (739)
T KOG1079|consen 342 ---IRQKLVKASSMDSD--------------DEHVEEEDKGHDDDDGVPRGFGGSV-----------NFVGE-------- 385 (739)
T ss_pred ---hhhhhcccccCCcc--------------hhhccccccCccccccccccccccc-----------ccccC--------
Confidence 12221111111111 1112223333323322221110000 10000
Q ss_pred cccCCCCCCCCCccchhhHHHhhhhccccccCCCCcchhHhHHHHHHHHhhCCccHHHHHhhhCCCccHHHHHHHHhhhc
Q 002418 522 EIVSNPPAISTNDSLRKDEFVAENMCKQELSDEKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMTCSE 601 (925)
Q Consensus 522 ~~~~~~~~~~~~d~~~~~e~~~~~~~~~e~~~~~~Wt~~E~~L~~k~~~ifg~NsC~IA~~Ll~g~KtC~EV~~ym~~~~ 601 (925)
+..+..++.....+.+|.... ....+|+++|+.||++++.+||.|+|+|||+|+ +|||++||+|++...
T Consensus 386 ----~~~~~~s~~~~~c~~~~~~~~-----~~~~ew~~~ek~~fr~~~~~~~~n~c~Iar~l~--~ktC~~v~~~~~~e~ 454 (739)
T KOG1079|consen 386 ----DDTSTHSSTNSICQNPVHGKK-----DTNVEWNGAEKVLFRVGSTLYGTNRCSIARNLL--TKTCRQVYEYEQKEV 454 (739)
T ss_pred ----CcccccccccccccCcccccC-----CcccccchhhhHHHHhccccccchhhHHHHHhc--chHHHHHHHHhhcch
Confidence 001111111122211111100 125689999999999999999999999999994 599999999999766
Q ss_pred cccccccCccchhhcccccccCCCCCCCCccchhhhHHHHhhhcccccccccCCccchhhhhhccccCCCCCCCCCCCCC
Q 002418 602 NKLFCQAGDAATSLLEGYSKFDFNGTTGNNEVRRRSRYLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGC 681 (925)
Q Consensus 602 ~~~~~~~~~~~~s~~~~~~k~~~~~~~~~~~~~~r~r~~rrr~r~r~l~~~wks~~~~~irkri~~~kd~~~~~y~PC~c 681 (925)
.......+. + ....+++.|.+.+|+.++.|+..+.|++..++.+|. |+||+|
T Consensus 455 ~~~~~~~~~----------~------~~~~~~~~r~~~~r~~g~~r~k~q~kk~~~~~~v~~------------~qpC~h 506 (739)
T KOG1079|consen 455 LQGLYFDGR----------F------RVELPGPKRARKLRLWGRHRRKIQNKKDSRHTVVWN------------YQPCDH 506 (739)
T ss_pred hhceecccc----------c------ccccCcchhhHHHHhhhhHHHhhhcccccCCceeee------------cCcccC
Confidence 433322111 0 113456678899999999999999999888877653 555555
Q ss_pred CCC--CCCCCcccCCCccccCCCCCCccccCCCcCcccCCCCccCCCCcccccccccCCCCCCCcccccCCCCCCCCCCC
Q 002418 682 QTA--CGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWISCGDGSLGVPDQK 759 (925)
Q Consensus 682 ~~~--C~~~C~C~~~g~~Cek~C~C~~~C~NRf~GC~C~~~~C~t~~CpC~~~~rECDPd~C~~C~~~Cg~~~l~~p~~~ 759 (925)
+++ |+.+|+|+.++++||++|+|+++|.|||+||+| ++||++++|||+++.|||||++|..||+ .+..+
T Consensus 507 p~~c~c~~~C~C~~n~~~CEk~C~C~~dC~nrF~GC~C-k~QC~tkqCpC~~A~rECdPd~Cl~cg~--------~~~~d 577 (739)
T KOG1079|consen 507 PGPCNCGVGCPCIDNETFCEKFCYCSPDCRNRFPGCRC-KAQCNTKQCPCYLAVRECDPDVCLMCGN--------VDHFD 577 (739)
T ss_pred CCCCCCCCCCcccccCcchhhcccCCHHHHhcCCCCCc-ccccccCcCchhhhccccCchHHhccCc--------ccccc
Confidence 544 478999999999999999999999999999999 9999999999999999999999999986 23456
Q ss_pred CCcccccchhhhcccceeEEEEEcCCCCceEEeccccCCCcEEEEEecccccHHHHhhhhcccccCCCccccccCccEEE
Q 002418 760 GDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVL 839 (925)
Q Consensus 760 g~~~~C~N~~lqrg~~k~l~V~kS~~kG~GLFA~edI~kGefI~EY~GElIs~~Ea~~R~k~yd~~~~sYlF~L~~~~vI 839 (925)
+..+.|+|+.+|++++++|.|++|.+.|||||+++.+.|++||.||+||+|+++||++|+++|+..+.+|||+|+.+|+|
T Consensus 578 ~~~~~C~N~~l~~~~qkr~llapSdVaGwGlFlKe~v~KnefisEY~GE~IS~dEADrRGkiYDr~~cSflFnln~dyvi 657 (739)
T KOG1079|consen 578 SSKISCKNTNLQRGEQKRVLLAPSDVAGWGLFLKESVSKNEFISEYTGEIISHDEADRRGKIYDRYMCSFLFNLNNDYVI 657 (739)
T ss_pred cCccccccchhhhhhhcceeechhhccccceeeccccCCCceeeeecceeccchhhhhcccccccccceeeeeccccceE
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCccccccCCCCCCceeEEEEEcCeeEEEEEEccCCCCCCeeeeecCCCCCCCcccCCCCCCCCCCCCCCCCCcc
Q 002418 840 DAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEASGSKKEEGGPSSG 919 (925)
Q Consensus 840 DA~~~GN~aRFINHSC~PNc~~~~v~V~G~~RI~~fA~RDI~aGEELTfDYg~~~d~~pC~Cgsp~CrG~Kkde~~~S~~ 919 (925)
||+++||.+||+|||-+|||++.+++|+|++||+|||.|+|.+||||||||+|+.++++-|-+.+. +.+|++....|.
T Consensus 658 Ds~rkGnk~rFANHS~nPNCYAkvm~V~GdhRIGifAkRaIeagEELffDYrYs~~~~~k~~~~~~--~s~k~e~~~~q~ 735 (739)
T KOG1079|consen 658 DSTRKGNKIRFANHSFNPNCYAKVMMVAGDHRIGIFAKRAIEAGEELFFDYRYSPEHALKFVGIER--ESYKVELKIFQA 735 (739)
T ss_pred eeeeecchhhhccCCCCCCcEEEEEEecCCcceeeeehhhcccCceeeeeeccCccccccccccCc--cccccchhhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999988877 778999888888
Q ss_pred chhc
Q 002418 920 RAKK 923 (925)
Q Consensus 920 rakk 923 (925)
+++|
T Consensus 736 ~~~~ 739 (739)
T KOG1079|consen 736 TQQK 739 (739)
T ss_pred hcCC
Confidence 7765
|
|
| >KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
| >KOG1083 consensus Putative transcription factor ASH1/LIN-59 [Transcription] | Back alignment and domain information |
|---|
| >KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >COG2940 Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco | Back alignment and domain information |
|---|
| >KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] | Back alignment and domain information |
|---|
| >KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription] | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG1079 consensus Transcriptional repressor EZH1 [Transcription] | Back alignment and domain information |
|---|
| >PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins | Back alignment and domain information |
|---|
| >smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains | Back alignment and domain information |
|---|
| >cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains | Back alignment and domain information |
|---|
| >smart00570 AWS associated with SET domains | Back alignment and domain information |
|---|
| >smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains | Back alignment and domain information |
|---|
| >PF13921 Myb_DNA-bind_6: Myb-like DNA-binding domain; PDB: 1A5J_A 1MBH_A 1GV5_A 1H89_C 1IDY_A 1MBK_A 1IDZ_A 1H88_C 1GVD_A 1MBG_A | Back alignment and domain information |
|---|
| >PF05033 Pre-SET: Pre-SET motif; InterPro: IPR007728 This region is found in a number of histone lysine methyltransferases (HMTase), N-terminal to the SET domain; it is generally described as the pre-SET domain | Back alignment and domain information |
|---|
| >cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains | Back alignment and domain information |
|---|
| >KOG1171 consensus Metallothionein-like protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 925 | ||||
| 2w5y_A | 192 | Binary Complex Of The Mixed Lineage Leukaemia (Mll1 | 4e-18 | ||
| 3ope_A | 222 | Structural Basis Of Auto-Inhibitory Mechanism Of Hi | 3e-16 | ||
| 2r3a_A | 300 | Methyltransferase Domain Of Human Suppressor Of Var | 1e-15 | ||
| 3ooi_A | 232 | Crystal Structure Of Human Histone-Lysine N-Methylt | 8e-15 | ||
| 4fmu_A | 278 | Crystal Structure Of Methyltransferase Domain Of Hu | 3e-13 | ||
| 3k5k_A | 283 | Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazolin | 2e-12 | ||
| 2o8j_A | 281 | Human Euchromatic Histone Methyltransferase 2 Lengt | 2e-12 | ||
| 2igq_A | 285 | Human Euchromatic Histone Methyltransferase 1 Lengt | 2e-11 | ||
| 3hna_A | 287 | Crystal Structure Of Catalytic Domain Of Human Euch | 2e-11 | ||
| 3fpd_A | 261 | G9a-Like Protein Lysine Methyltransferase Inhibitio | 3e-11 | ||
| 4i51_A | 286 | Methyltransferase Domain Of Human Euchromatic Histo | 1e-10 | ||
| 1mvh_A | 299 | Structure Of The Set Domain Histone Lysine Methyltr | 6e-08 | ||
| 4ij8_A | 165 | Crystal Structure Of The Complex Of Setd8 With Sam | 2e-07 | ||
| 3bo5_A | 290 | Crystal Structure Of Methyltransferase Domain Of Hu | 6e-07 | ||
| 1zkk_A | 167 | Crystal Structure Of Hset8 In Ternary Complex With | 6e-07 | ||
| 2bqz_A | 161 | Crystal Structure Of A Ternary Complex Of The Human | 6e-07 | ||
| 1ml9_A | 302 | Structure Of The Neurospora Set Domain Protein Dim- | 1e-06 | ||
| 3f9z_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 2e-06 | ||
| 3f9w_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 2e-06 |
| >pdb|2W5Y|A Chain A, Binary Complex Of The Mixed Lineage Leukaemia (Mll1) Set Domain With The Cofactor Product S-Adenosylhomocysteine. Length = 192 | Back alignment and structure |
|
| >pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 | Back alignment and structure |
| >pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 | Back alignment and structure |
| >pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 | Back alignment and structure |
| >pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 | Back alignment and structure |
| >pdb|3K5K|A Chain A, Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazoline As A Potent Inhibitor Of Histone Lysine Methyltransferase, G9a Length = 283 | Back alignment and structure |
| >pdb|2O8J|A Chain A, Human Euchromatic Histone Methyltransferase 2 Length = 281 | Back alignment and structure |
| >pdb|2IGQ|A Chain A, Human Euchromatic Histone Methyltransferase 1 Length = 285 | Back alignment and structure |
| >pdb|3HNA|A Chain A, Crystal Structure Of Catalytic Domain Of Human Euchromatic Histone Methyltransferase 1 In Complex With Sah And Mono- Methylated H3k9 Peptide Length = 287 | Back alignment and structure |
| >pdb|3FPD|A Chain A, G9a-Like Protein Lysine Methyltransferase Inhibition By Bix- 01294 Length = 261 | Back alignment and structure |
| >pdb|4I51|A Chain A, Methyltransferase Domain Of Human Euchromatic Histone Methyltransferase 1, Mutant Y1211a Length = 286 | Back alignment and structure |
| >pdb|1MVH|A Chain A, Structure Of The Set Domain Histone Lysine Methyltransferase Clr4 Length = 299 | Back alignment and structure |
| >pdb|4IJ8|A Chain A, Crystal Structure Of The Complex Of Setd8 With Sam Length = 165 | Back alignment and structure |
| >pdb|3BO5|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Histone-Lysine N-Methyltransferase Setmar Length = 290 | Back alignment and structure |
| >pdb|1ZKK|A Chain A, Crystal Structure Of Hset8 In Ternary Complex With H4 Peptide (16-24) And Adohcy Length = 167 | Back alignment and structure |
| >pdb|2BQZ|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Pr-Set7 (Also Known As Set8) Length = 161 | Back alignment and structure |
| >pdb|1ML9|A Chain A, Structure Of The Neurospora Set Domain Protein Dim-5, A Histone Lysine Methyltransferase Length = 302 | Back alignment and structure |
| >pdb|3F9Z|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y245f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|3F9W|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y334f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 4e-46
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 720 SQCRSRQCPCFAADRECDPDVCRNCWISCGDGSLGVPDQKGDNYECRNMKLLLKQQQRVL 779
RQ P + + E + +V L +P R L ++ V
Sbjct: 4 GSHMHRQPPEYNPNDEEEEEVQLKSARRATSMDLPMP--------MRFRHLKKTSKEAVG 55
Query: 780 LGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDREN-SSFLFNLNDQFV 838
+ RS + G G F K ++ E + EY G +I + DKR K YD + ++F ++D V
Sbjct: 56 VYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEV 115
Query: 839 LDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPD 895
+DA G+ +F NHS +PNCY++VI + G + IFA +I GEEL YDY++ +
Sbjct: 116 VDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIE 172
|
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 | Back alignment and structure |
|---|
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Length = 152 | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196 | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Length = 699 | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Length = 237 | Back alignment and structure |
|---|
| >2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 925 | |||
| 3ooi_A | 232 | Histone-lysine N-methyltransferase, H3 lysine-36 l | 100.0 | |
| 3ope_A | 222 | Probable histone-lysine N-methyltransferase ASH1L; | 100.0 | |
| 3bo5_A | 290 | Histone-lysine N-methyltransferase setmar; SET dom | 100.0 | |
| 3h6l_A | 278 | Histone-lysine N-methyltransferase SETD2; SET doma | 100.0 | |
| 1mvh_A | 299 | Cryptic LOCI regulator 4; lysine methyltransferase | 100.0 | |
| 3hna_A | 287 | Histone-lysine N-methyltransferase, H3 lysine-9 sp | 100.0 | |
| 1ml9_A | 302 | Histone H3 methyltransferase DIM-5; adoMet-depende | 100.0 | |
| 2r3a_A | 300 | Histone-lysine N-methyltransferase SUV39H2; histon | 100.0 | |
| 2w5y_A | 192 | Histone-lysine N-methyltransferase HRX; transcript | 100.0 | |
| 3f9x_A | 166 | Histone-lysine N-methyltransferase SETD8; methyltr | 99.97 | |
| 2f69_A | 261 | Histone-lysine N-methyltransferase, H3 lysine-4 sp | 99.94 | |
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 99.93 | |
| 1n3j_A | 119 | A612L, histone H3 lysine methyltransferase; beta b | 99.92 | |
| 2qpw_A | 149 | PR domain zinc finger protein 2; methyltransferase | 99.92 | |
| 3s8p_A | 273 | Histone-lysine N-methyltransferase SUV420H1; SET d | 99.89 | |
| 3rq4_A | 247 | Histone-lysine N-methyltransferase SUV420H2; suppr | 99.82 | |
| 3ep0_A | 170 | PR domain zinc finger protein 12; PR domain-contai | 99.78 | |
| 3db5_A | 151 | PR domain zinc finger protein 4; methyltransferase | 99.74 | |
| 3dal_A | 196 | PR domain zinc finger protein 1; methyltransferase | 99.73 | |
| 3ray_A | 237 | PR domain-containing protein 11; structural genomi | 99.55 | |
| 3ihx_A | 152 | PR domain zinc finger protein 10; PRDM10, methyltr | 99.5 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.32 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.23 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.13 | |
| 3qxy_A | 449 | N-lysine methyltransferase SETD6; epigenetics, pro | 96.33 | |
| 2h21_A | 440 | Ribulose-1,5 bisphosphate carboxylase/oxygenase; S | 96.1 | |
| 2llk_A | 73 | Cyclin-D-binding MYB-like transcription factor 1; | 95.46 | |
| 3smt_A | 497 | Histone-lysine N-methyltransferase SETD3; histone | 95.01 | |
| 2cqr_A | 73 | RSGI RUH-043, DNAJ homolog subfamily C member 1; m | 94.55 | |
| 2lr8_A | 70 | CAsp8-associated protein 2; structural genomics, n | 93.44 | |
| 2crg_A | 70 | Metastasis associated protein MTA3; transcription | 94.02 | |
| 2yqk_A | 63 | Arginine-glutamic acid dipeptide repeats protein; | 93.36 | |
| 2eqr_A | 61 | N-COR1, N-COR, nuclear receptor corepressor 1; SAN | 93.26 | |
| 2yum_A | 75 | ZZZ3 protein, zinc finger ZZ-type-containing prote | 93.07 | |
| 1x41_A | 60 | Transcriptional adaptor 2-like, isoform B; transcr | 92.72 | |
| 3sjm_A | 64 | Telomeric repeat-binding factor 2; human telomeric | 91.93 | |
| 2d9a_A | 60 | B-MYB, MYB-related protein B; DNA binding, structu | 91.87 | |
| 2din_A | 66 | Cell division cycle 5-like protein; MYB_DNA-bindin | 91.61 | |
| 2elk_A | 58 | SPCC24B10.08C protein; hypothetical protein, struc | 91.55 | |
| 1guu_A | 52 | C-MYB, MYB proto-oncogene protein; transcription, | 91.35 | |
| 1ug2_A | 95 | 2610100B20RIK gene product; hypothetical protein, | 90.72 | |
| 2cu7_A | 72 | KIAA1915 protein; nuclear protein, SANT domain, DN | 90.25 | |
| 1w0t_A | 53 | Telomeric repeat binding factor 1; telomere, DNA-b | 89.89 | |
| 2iw5_B | 235 | Protein corest, REST corepressor 1; oxidoreductase | 89.87 | |
| 2cqq_A | 72 | RSGI RUH-037, DNAJ homolog subfamily C member 1; m | 88.76 | |
| 4a69_C | 94 | Nuclear receptor corepressor 2; transcription, hyd | 88.52 | |
| 2cjj_A | 93 | Radialis; plant development, DNA-binding protein, | 88.28 | |
| 1gvd_A | 52 | MYB proto-oncogene protein; transcription, transcr | 87.92 | |
| 2yus_A | 79 | SWI/SNF-related matrix-associated actin- dependent | 86.87 | |
| 1ity_A | 69 | TRF1; helix-turn-helix, telomeres, DNA binding, MY | 85.58 | |
| 1gv2_A | 105 | C-MYB, MYB proto-oncogene protein; transcription, | 85.57 | |
| 2k9n_A | 107 | MYB24; R2R3 domain, DNA-binding, nucleus, DNA bind | 85.26 | |
| 3osg_A | 126 | MYB21; transcription-DNA complex, MYB2, R2R3 domai | 85.15 | |
| 2dim_A | 70 | Cell division cycle 5-like protein; MYB_DNA-bindin | 85.1 | |
| 1mvh_A | 299 | Cryptic LOCI regulator 4; lysine methyltransferase | 84.91 | |
| 1h8a_C | 128 | AMV V-MYB, MYB transforming protein; transcription | 81.82 | |
| 2ltp_A | 89 | Nuclear receptor corepressor 2; SMRT, TRAC, SGC, s | 81.08 |
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=370.41 Aligned_cols=208 Identities=31% Similarity=0.526 Sum_probs=176.2
Q ss_pred ccCCccchhhhhhccccCCCC----CCCCCCCCCCCCCCCCCcccCCCccccCCCCCCccccCCCcCcccCCCCccCCCC
Q 002418 652 TWKSAAYHSIRKRITERKDQP----CRQYNPCGCQTACGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQC 727 (925)
Q Consensus 652 ~wks~~~~~irkri~~~kd~~----~~~y~PC~c~~~C~~~C~C~~~g~~Cek~C~C~~~C~NRf~GC~C~~~~C~t~~C 727 (925)
..++|.|.+|+++...+..+. ..+...|+|... ++..|+|+++|.||..
T Consensus 14 ~~~pp~y~~i~~n~~~~~~~~~~~~~~~~~~C~C~~~-------------~~~~C~~~~~C~nr~~-------------- 66 (232)
T 3ooi_A 14 DKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKAT-------------DENPCGIDSECINRML-------------- 66 (232)
T ss_dssp CCSCCCCEECSSCEECTTCCCCCCCGGGSCCCSCCTT-------------SSSTTCTTSCCHHHHT--------------
T ss_pred CCCCCCceEeeccccccccccccCCcccCCcccccCC-------------CCCCCCCCCCCcCcCc--------------
Confidence 356788988887765544332 224556666532 3567888888888874
Q ss_pred cccccccccCCCCCCCcccccCCCCCCCCCCCCCcccccchhhhcccceeEEEEEcCCCCceEEeccccCCCcEEEEEec
Q 002418 728 PCFAADRECDPDVCRNCWISCGDGSLGVPDQKGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTG 807 (925)
Q Consensus 728 pC~~~~rECDPd~C~~C~~~Cg~~~l~~p~~~g~~~~C~N~~lqrg~~k~l~V~kS~~kG~GLFA~edI~kGefI~EY~G 807 (925)
..||+|..|. |+ ..|+|+.+|++...+|+|++++.+||||||+++|++|+||+||+|
T Consensus 67 -----~~EC~~~~C~-c~-----------------~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~G 123 (232)
T 3ooi_A 67 -----LYECHPTVCP-AG-----------------GRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVG 123 (232)
T ss_dssp -----TBCCCTTTCT-TG-----------------GGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCE
T ss_pred -----eeEeCCCCCC-CC-----------------CCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEeee
Confidence 6788887664 32 189999999999999999999999999999999999999999999
Q ss_pred ccccHHHHhhhhcccccC--CCccccccCccEEEeccccCCccccccCCCCCCceeEEEEEcCeeEEEEEEccCCCCCCe
Q 002418 808 ELISHREADKRGKIYDRE--NSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEE 885 (925)
Q Consensus 808 ElIs~~Ea~~R~k~yd~~--~~sYlF~L~~~~vIDA~~~GN~aRFINHSC~PNc~~~~v~V~G~~RI~~fA~RDI~aGEE 885 (925)
|||+..++.+|...+... ...|+|.++.+++|||+.+||++|||||||+|||.++.|.+.+.++|+|||+|||++|||
T Consensus 124 evi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEE 203 (232)
T 3ooi_A 124 ELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTE 203 (232)
T ss_dssp EEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCB
T ss_pred eccCHHHHHHHHHHHhhcCCCceeeeecCcceEEeccccccccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCE
Confidence 999999999987655543 457899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCC---CCCcccCCCCCCCCC
Q 002418 886 LFYDYRYEP---DRAPAWARKPEASGS 909 (925)
Q Consensus 886 LTfDYg~~~---d~~pC~Cgsp~CrG~ 909 (925)
|||||++.. ..++|+||+++|+|.
T Consensus 204 LT~dY~~~~~~~~~~~C~CGs~~CrG~ 230 (232)
T 3ooi_A 204 LTFNYNLECLGNGKTVCKCGAPNCSGF 230 (232)
T ss_dssp CEECCTTCSTTCTTCBCCCCCTTCCSB
T ss_pred EEEECCCCcCCCCCcEeECCCCcCcCc
Confidence 999998764 367899999999986
|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* | Back alignment and structure |
|---|
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
| >3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* | Back alignment and structure |
|---|
| >2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* | Back alignment and structure |
|---|
| >2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} | Back alignment and structure |
|---|
| >2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1 | Back alignment and structure |
|---|
| >3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A | Back alignment and structure |
|---|
| >2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A | Back alignment and structure |
|---|
| >1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A | Back alignment and structure |
|---|
| >2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B* | Back alignment and structure |
|---|
| >2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A | Back alignment and structure |
|---|
| >2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A | Back alignment and structure |
|---|
| >2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A | Back alignment and structure |
|---|
| >1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A | Back alignment and structure |
|---|
| >2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A | Back alignment and structure |
|---|
| >3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A | Back alignment and structure |
|---|
| >2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A | Back alignment and structure |
|---|
| >1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3 | Back alignment and structure |
|---|
| >2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 925 | ||||
| d1mvha_ | 269 | b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S | 4e-35 | |
| d1ml9a_ | 284 | b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T | 3e-31 | |
| d2f69a2 | 171 | b.85.7.1 (A:194-364) Histone H3 K4-specific methyl | 2e-28 | |
| d2g46a1 | 119 | b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth | 5e-13 |
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: SET domain of Clr4 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 133 bits (334), Expect = 4e-35
Identities = 53/220 (24%), Positives = 80/220 (36%), Gaps = 25/220 (11%)
Query: 690 PCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADR--ECDPDVCRNCWIS 747
P +G C GC + +R C C A R V C
Sbjct: 62 PNFQSGCNCSSLGGCDLNNPSR---CECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSF 118
Query: 748 CGDGSLGVPDQKGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTG 807
C EC N + + + + ++ GWG ++ Y G
Sbjct: 119 CSCSM-----------ECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLG 167
Query: 808 ELISHREADKRGKIYDRENSSFLFNL-----NDQFVLDAYRKGDKLKFANHSPDPNCYAK 862
E+I+ EA KR K YD + ++LF+L ++ +DA GD +F NHS PN
Sbjct: 168 EVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIY 227
Query: 863 VIMVAGD----HRVGIFAKERISAGEELFYDYRYEPDRAP 898
+ + + FA + I EEL +DY D +P
Sbjct: 228 SAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSP 267
|
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 | Back information, alignment and structure |
|---|
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 925 | |||
| d1mvha_ | 269 | SET domain of Clr4 {Fission yeast (Schizosaccharom | 100.0 | |
| d1ml9a_ | 284 | Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | 100.0 | |
| d2f69a2 | 171 | Histone H3 K4-specific methyltransferase SET7/9 ca | 99.92 | |
| d2g46a1 | 119 | Viral histone H3 Lysine 27 Methyltransferase {Para | 99.87 | |
| d2h2ja2 | 261 | RuBisCo LSMT catalytic domain {Garden pea (Pisum s | 98.02 | |
| d1ug2a_ | 95 | 2610100b20rik gene product {Mouse (Mus musculus) [ | 95.63 | |
| d2cqra1 | 60 | DnaJ homolog subfamily C member 1 {Human (Homo sap | 95.05 | |
| d2crga1 | 57 | Metastasis associated protein MTA3 {Mouse (Mus mus | 94.98 | |
| d1guua_ | 50 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 94.57 | |
| d1w0ua_ | 55 | Telomeric repeat binding factor 2, TRF2 {Human (Ho | 93.85 | |
| d1gv2a2 | 47 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 93.79 | |
| d2iw5b1 | 65 | REST corepressor 1, CoREST {Human (Homo sapiens) [ | 92.83 | |
| d1xc5a1 | 68 | Nuclear receptor corepressor 2 {Human (Homo sapien | 91.02 | |
| d2cjja1 | 63 | Radialis {Garden snapdragon (Antirrhinum majus) [T | 91.0 | |
| d2cu7a1 | 65 | MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 960 | 90.73 | |
| d1gvda_ | 52 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 90.53 | |
| d1x41a1 | 47 | Transcriptional adaptor 2-like, TADA2L, isoform b | 89.05 | |
| d2cu7a1 | 65 | MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 960 | 87.29 | |
| d1w0ta_ | 52 | DNA-binding domain of human telomeric protein, hTR | 87.13 | |
| d1igna1 | 86 | DNA-binding domain of rap1 {Baker's yeast (Sacchar | 84.6 | |
| d2cqqa1 | 59 | DnaJ homolog subfamily C member 1 {Human (Homo sap | 82.56 | |
| d2iw5b1 | 65 | REST corepressor 1, CoREST {Human (Homo sapiens) [ | 82.29 | |
| d1x41a1 | 47 | Transcriptional adaptor 2-like, TADA2L, isoform b | 80.75 |
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: SET domain of Clr4 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=7.2e-39 Score=338.71 Aligned_cols=136 Identities=29% Similarity=0.452 Sum_probs=127.9
Q ss_pred cccchhhhcccceeEEEEEcCCCCceEEeccccCCCcEEEEEecccccHHHHhhhhcccccCCCccccccC-----ccEE
Q 002418 764 ECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLN-----DQFV 838 (925)
Q Consensus 764 ~C~N~~lqrg~~k~l~V~kS~~kG~GLFA~edI~kGefI~EY~GElIs~~Ea~~R~k~yd~~~~sYlF~L~-----~~~v 838 (925)
.|.|+.+|++...+|+|++|+.+||||||+++|++|+||+||+||||+..++.+|...|+....+|+|.+. ..++
T Consensus 124 ~C~Nr~~q~g~~~~leV~~t~~~G~GvfA~~~I~kGt~I~eY~Gevi~~~e~~~R~~~y~~~~~~~~~~l~~~~~~~~~~ 203 (269)
T d1mvha_ 124 ECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYT 203 (269)
T ss_dssp TCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCEE
T ss_pred CCCCeecCCCCccCEEEEEcCCCCeEEEeCcccCCCceEEEecceEEcHHHHHHHHHhHhhcCCcchhheecccccccce
Confidence 89999999999999999999999999999999999999999999999999999999999988888988764 5789
Q ss_pred EeccccCCccccccCCCCCCceeEEEEEcCe----eEEEEEEccCCCCCCeeeeecCCCCCCCcc
Q 002418 839 LDAYRKGDKLKFANHSPDPNCYAKVIMVAGD----HRVGIFAKERISAGEELFYDYRYEPDRAPA 899 (925)
Q Consensus 839 IDA~~~GN~aRFINHSC~PNc~~~~v~V~G~----~RI~~fA~RDI~aGEELTfDYg~~~d~~pC 899 (925)
|||+.+||++|||||||+|||.++.|++++. ++|+|||+|||++||||||||||..+..|.
T Consensus 204 iDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GEELt~DYG~~~d~~P~ 268 (269)
T d1mvha_ 204 VDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPV 268 (269)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCC
T ss_pred eeeeecCcceEEeecCCCCCcEEEEEEecCCcCccceEEEEECCccCCCCEEEEecCCCcCCCCC
Confidence 9999999999999999999999999988753 789999999999999999999998887764
|
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} | Back information, alignment and structure |
|---|
| >d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|