Citrus Sinensis ID: 002436
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 921 | 2.2.26 [Sep-21-2011] | |||||||
| Q9CAG3 | 917 | Lipoxygenase 6, choloropl | yes | no | 0.986 | 0.991 | 0.644 | 0.0 | |
| O24371 | 914 | Linoleate 13S-lipoxygenas | N/A | no | 0.901 | 0.908 | 0.591 | 0.0 | |
| Q9FNX8 | 926 | Lipoxygenase 4, chloropla | no | no | 0.950 | 0.944 | 0.541 | 0.0 | |
| Q9LNR3 | 919 | Lipoxygenase 3, chloropla | no | no | 0.903 | 0.905 | 0.557 | 0.0 | |
| Q8H016 | 918 | Probable lipoxygenase 6 O | yes | no | 0.905 | 0.908 | 0.537 | 0.0 | |
| Q7XV13 | 899 | Putative lipoxygenase 5 O | no | no | 0.888 | 0.909 | 0.523 | 0.0 | |
| O24370 | 899 | Linoleate 13S-lipoxygenas | N/A | no | 0.899 | 0.921 | 0.511 | 0.0 | |
| Q8GSM2 | 896 | Lipoxygenase 2.3, chlorop | N/A | no | 0.899 | 0.924 | 0.490 | 0.0 | |
| Q84YK8 | 941 | Probable lipoxygenase 8, | no | no | 0.861 | 0.842 | 0.510 | 0.0 | |
| P38419 | 924 | Lipoxygenase 7, chloropla | no | no | 0.862 | 0.859 | 0.507 | 0.0 |
| >sp|Q9CAG3|LOX6_ARATH Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1195 bits (3091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/927 (64%), Positives = 715/927 (77%), Gaps = 18/927 (1%)
Query: 1 MSSALKTQLLTGPALRRVPAIPGAVSNGNLRPARVSKSKFCPIRAVVNSDQNKA-TEAAT 59
++S +KT G +L + PA A+S +S+ +RAV++ ++ E
Sbjct: 3 VASPVKTNF-NGVSLVKSPAF-SALSCRKQHRVPISRQ----VRAVISREEKAVDQEDGK 56
Query: 60 KSVDAKDVNGSLLVSSSSSKEGLVDVRAVITIRKKLKEKLTEKIEDQWELFVNGIGQGIM 119
KS + +N S S G V AV+ IRKK+KEKLTE+ E Q ELF+ IGQG++
Sbjct: 57 KSTNKPLINSSQFPWQRSKYTGSKTVTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGML 116
Query: 120 IQLISEDIDPVTNSG-KSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILIT 178
IQL+SE+IDP T G KS+ES V G LPK V +F A+F VP +FG PGAIL+T
Sbjct: 117 IQLVSEEIDPETGKGRKSLESPVMG-LPKAVKDPRYLVFT--ADFTVPINFGKPGAILVT 173
Query: 179 NLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDL 238
NL E L EI++ + FPANTWIHS+ DN ++RIIF++Q LPS+TP GIK+L
Sbjct: 174 NLLSTEICLSEIIIED-STDTILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKEL 232
Query: 239 RREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGR 298
R +DL+S+RG+GKGERK HERIYDY VYNDLG+P K + + RPVL E PYPRRCRTGR
Sbjct: 233 REKDLVSVRGDGKGERKPHERIYDYDVYNDLGDPRKTERV-RPVLGVPETPYPRRCRTGR 291
Query: 299 PPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDI 358
P DP CESR ++ YVPRDE FEEIK++TF +GR KA+ HNL+PSIAA+LS+ DI
Sbjct: 292 PLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDI 351
Query: 359 PFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRF 418
PFTCFSDID LY S +L + ++ F+ + LNV + L KY+TPAVI+ DRF
Sbjct: 352 PFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGILNVTETLLKYDTPAVIKWDRF 411
Query: 419 AWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL--HGLS 476
AWLRDNEF RQ LAGVNPVNIE LKE PI S LDPA+YGP ES +T+E+I E+ +G +
Sbjct: 412 AWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREVEHYGTT 471
Query: 477 VEKAIEEKRLFILDYHDLLLPFIEKINSLPD--RKTYASRTVFFYNKAGMLRPLAIELSL 534
+EKA+EEKRLF++DYHD+LLPF+EKINS+ + RKTYASRT+FFY+K G LRPLAIELSL
Sbjct: 472 IEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIFFYSKNGALRPLAIELSL 531
Query: 535 PPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIAT 594
PP+ S +NK +YTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWL THASMEPYIIAT
Sbjct: 532 PPTAES-ENKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIAT 590
Query: 595 HRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSF 654
+RQLS+MHP+YKLLHPHMRYTLEINA AR+SLINGGGIIE+ F+PG+YAMELSSAAYKS
Sbjct: 591 NRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSM 650
Query: 655 WRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFY 714
WRFDME LPADL+RRGMAEED S GVRLVI+DYPYAADGLLIW AIK+ VESYV HFY
Sbjct: 651 WRFDMEGLPADLVRRGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESYVKHFY 710
Query: 715 SEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAI 774
S+ S+TSD+ELQAWW EIKNKGH+DK++E WWPKL T +DLS I+T MIW ASGQHAAI
Sbjct: 711 SDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAI 770
Query: 775 NFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDT 834
NFGQYPFGGYVPNRPTL+RKL+PQE DP YE F+ NPQ++FL SLPTQLQATKVMAVQ+T
Sbjct: 771 NFGQYPFGGYVPNRPTLLRKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQET 830
Query: 835 LSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGA 894
LSTHSPDEEYL ++ ++ HW D +V+ F+KFS L +IEK IN RNKD +LK R GA
Sbjct: 831 LSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGA 890
Query: 895 GIPPYELLLPSSGPGVTGRGIPNSISI 921
G+PPYELLLP+S GVTGRGIPNSISI
Sbjct: 891 GMPPYELLLPTSPHGVTGRGIPNSISI 917
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Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity). 13S-lipoxygenase that can use linolenic acid as substrates. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2 |
| >sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q7XV13|LOX5_ORYSJ Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2 | Back alignment and function description |
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| >sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1 | Back alignment and function description |
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| >sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 921 | ||||||
| 225425842 | 920 | PREDICTED: lipoxygenase 6, choloroplasti | 0.951 | 0.952 | 0.803 | 0.0 | |
| 255547812 | 912 | lipoxygenase, putative [Ricinus communis | 0.968 | 0.978 | 0.777 | 0.0 | |
| 356525142 | 921 | PREDICTED: lipoxygenase 6, choloroplasti | 0.929 | 0.929 | 0.783 | 0.0 | |
| 224100047 | 924 | predicted protein [Populus trichocarpa] | 0.989 | 0.985 | 0.768 | 0.0 | |
| 449435043 | 928 | PREDICTED: lipoxygenase 6, choloroplasti | 0.973 | 0.966 | 0.757 | 0.0 | |
| 224107643 | 825 | predicted protein [Populus trichocarpa] | 0.895 | 1.0 | 0.796 | 0.0 | |
| 10505183 | 816 | lipoxygenase [Zantedeschia aethiopica] | 0.882 | 0.996 | 0.711 | 0.0 | |
| 15220475 | 917 | lipoxygenase 6 [Arabidopsis thaliana] gi | 0.986 | 0.991 | 0.644 | 0.0 | |
| 297838497 | 917 | lipoxygenase family protein [Arabidopsis | 0.986 | 0.991 | 0.640 | 0.0 | |
| 224286530 | 924 | unknown [Picea sitchensis] | 0.947 | 0.944 | 0.623 | 0.0 |
| >gi|225425842|ref|XP_002265505.1| PREDICTED: lipoxygenase 6, choloroplastic [Vitis vinifera] gi|297738375|emb|CBI27576.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 1474 bits (3817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/880 (80%), Positives = 789/880 (89%), Gaps = 4/880 (0%)
Query: 42 PIRAVVNSDQNKATEAATKSVDAKDVNGSLLVSSSSSKEGLVDVRAVITIRKKLKEKLTE 101
PIRAV++S ++K E K+V++KD N L SSSSS +G +DVRAVITIRKK+KEK+TE
Sbjct: 45 PIRAVISS-EDKTVEGGAKAVESKDGNVLLSSSSSSSAKG-IDVRAVITIRKKMKEKITE 102
Query: 102 KIEDQWELFVNGIGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEA 161
KIEDQWE F+NGIGQGI IQL+SE+IDPVT SGKSVES VRGWLPKP S+ I +Y A
Sbjct: 103 KIEDQWEGFMNGIGQGISIQLVSEEIDPVTMSGKSVESFVRGWLPKP--SNLPYIVEYAA 160
Query: 162 NFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIF 221
+F VP DFG+PGA+LI+NLHGKEF+L+EIV+HGFD GP+FFPAN+WIHSRKDN ESRIIF
Sbjct: 161 DFTVPLDFGSPGAVLISNLHGKEFHLMEIVIHGFDEGPIFFPANSWIHSRKDNPESRIIF 220
Query: 222 KNQAYLPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARP 281
+NQAYLPSQTP G+KDLRREDLLS+RGN KGERK H+RIYDYA YNDLGNPDK +DLARP
Sbjct: 221 RNQAYLPSQTPPGLKDLRREDLLSLRGNRKGERKPHDRIYDYAPYNDLGNPDKSEDLARP 280
Query: 282 VLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV 341
VL+GEERPYPRRCRTGRPPT+TDPLCESR EKPHPVYVPRDETFEEIKQNTFS+GRLKA+
Sbjct: 281 VLAGEERPYPRRCRTGRPPTRTDPLCESRSEKPHPVYVPRDETFEEIKQNTFSAGRLKAL 340
Query: 342 LHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVG 401
LHNLIPSIAA+LSSSDIPF CFSDIDKLYN G LLKD+++Q +F + ++KQ L+VG
Sbjct: 341 LHNLIPSIAATLSSSDIPFKCFSDIDKLYNDGVLLKDEEDQKMSGNVFPSNMMKQVLSVG 400
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
+L KYE PA+I RDRFAWLRDNEFARQTLAGVNPVNIE LK FPI+SKLDPA+YGPPES
Sbjct: 401 QKLLKYEVPAIISRDRFAWLRDNEFARQTLAGVNPVNIEILKGFPIVSKLDPAVYGPPES 460
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNK 521
AITKELI++EL G++VE+AIE+KRLFILDYHD+LLPFI K+N+LP+R+ YASRTVFFY +
Sbjct: 461 AITKELIQQELSGITVEEAIEDKRLFILDYHDMLLPFIGKMNTLPERQAYASRTVFFYTR 520
Query: 522 AGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWL 581
G LRP+AIELSLPP+ SSP K +YTHGHDATTHWIWK AKAHVCSNDAGVHQLVNHWL
Sbjct: 521 TGFLRPIAIELSLPPTPSSPGKKRVYTHGHDATTHWIWKQAKAHVCSNDAGVHQLVNHWL 580
Query: 582 MTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGR 641
THA MEPYIIATHRQLS+MHPI KLL PH+RYTLEINALARQSLINGGGIIEA FSPG+
Sbjct: 581 RTHACMEPYIIATHRQLSAMHPINKLLRPHLRYTLEINALARQSLINGGGIIEACFSPGK 640
Query: 642 YAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 701
YAMELSSAAYKS W+FDMEALPADL+RRGMA EDPSMP GV+L+IEDYPYAADGLLIW A
Sbjct: 641 YAMELSSAAYKSMWQFDMEALPADLIRRGMAVEDPSMPCGVKLLIEDYPYAADGLLIWSA 700
Query: 702 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 761
IKEWVESYV HFYSEPN+VTSD+ELQAWW+EIKN+GH+DKRNE+WWPKL TKE LSGI+T
Sbjct: 701 IKEWVESYVDHFYSEPNTVTSDLELQAWWNEIKNEGHYDKRNESWWPKLNTKEHLSGILT 760
Query: 762 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 821
MIW ASGQHAAINFGQYPFGGYVPNRPTLMRKL+P E+D YEKFLLNPQ TFLSSLPT
Sbjct: 761 TMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPHEDDSAYEKFLLNPQSTFLSSLPT 820
Query: 822 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 881
QLQATKVMAVQDTLSTHSPDEEYLGQ + LHSHWI DPEVL+MF KFSA LEEIE+II
Sbjct: 821 QLQATKVMAVQDTLSTHSPDEEYLGQTHHLHSHWIKDPEVLDMFKKFSAKLEEIEEIIKG 880
Query: 882 RNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
RNK+ LK R GAGIPPYELLLPSSGPGVTGRGIPNSISI
Sbjct: 881 RNKNIHLKNRNGAGIPPYELLLPSSGPGVTGRGIPNSISI 920
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255547812|ref|XP_002514963.1| lipoxygenase, putative [Ricinus communis] gi|223546014|gb|EEF47517.1| lipoxygenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356525142|ref|XP_003531186.1| PREDICTED: lipoxygenase 6, choloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224100047|ref|XP_002311724.1| predicted protein [Populus trichocarpa] gi|222851544|gb|EEE89091.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449435043|ref|XP_004135305.1| PREDICTED: lipoxygenase 6, choloroplastic-like [Cucumis sativus] gi|449494883|ref|XP_004159673.1| PREDICTED: lipoxygenase 6, choloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224107643|ref|XP_002314548.1| predicted protein [Populus trichocarpa] gi|222863588|gb|EEF00719.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|10505183|gb|AAG18376.1|AF283894_1 lipoxygenase [Zantedeschia aethiopica] | Back alignment and taxonomy information |
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| >gi|15220475|ref|NP_176923.1| lipoxygenase 6 [Arabidopsis thaliana] gi|75262277|sp|Q9CAG3.1|LOX6_ARATH RecName: Full=Lipoxygenase 6, choloroplastic; Short=AtLOX6; Flags: Precursor gi|12324686|gb|AAG52309.1|AC011020_16 putative lipoxygenase [Arabidopsis thaliana] gi|19698813|gb|AAL91142.1| putative lipoxygenase [Arabidopsis thaliana] gi|34365715|gb|AAQ65169.1| At1g67560 [Arabidopsis thaliana] gi|48958183|emb|CAG38328.1| 13-lipoxygenase [Arabidopsis thaliana] gi|332196543|gb|AEE34664.1| lipoxygenase 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297838497|ref|XP_002887130.1| lipoxygenase family protein [Arabidopsis lyrata subsp. lyrata] gi|297332971|gb|EFH63389.1| lipoxygenase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|224286530|gb|ACN40971.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 921 | ||||||
| TAIR|locus:2008808 | 917 | LOX6 "lipoxygenase 6" [Arabido | 0.986 | 0.991 | 0.618 | 1.2e-303 | |
| TAIR|locus:2030215 | 926 | LOX4 "lipoxygenase 4" [Arabido | 0.950 | 0.944 | 0.528 | 2e-253 | |
| TAIR|locus:2018848 | 919 | LOX3 "lipoxygenase 3" [Arabido | 0.878 | 0.880 | 0.551 | 1.1e-247 | |
| UNIPROTKB|P38419 | 924 | CM-LOX1 "Lipoxygenase 7, chlor | 0.862 | 0.859 | 0.506 | 8.4e-216 | |
| TAIR|locus:2096915 | 896 | LOX2 "lipoxygenase 2" [Arabido | 0.854 | 0.878 | 0.486 | 3e-211 | |
| TAIR|locus:2011030 | 859 | LOX1 "lipoxygenase 1" [Arabido | 0.868 | 0.931 | 0.469 | 6.3e-195 | |
| TAIR|locus:2087837 | 886 | LOX5 [Arabidopsis thaliana (ta | 0.870 | 0.905 | 0.439 | 2.1e-180 | |
| UNIPROTKB|P29250 | 870 | LOX1.1 "Linoleate 9S-lipoxygen | 0.870 | 0.921 | 0.428 | 4.9e-172 | |
| ZFIN|ZDB-GENE-050522-330 | 676 | zgc:110251 "zgc:110251" [Danio | 0.425 | 0.579 | 0.321 | 8.4e-49 | |
| ZFIN|ZDB-GENE-060623-19 | 676 | zgc:136911 "zgc:136911" [Danio | 0.418 | 0.569 | 0.333 | 3.6e-48 |
| TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2914 (1030.8 bits), Expect = 1.2e-303, P = 1.2e-303
Identities = 573/927 (61%), Positives = 685/927 (73%)
Query: 1 MSSALKTQLLTGPALRRVPAIPGAVSNGNLRPARVSKSKFCPIRAVVNSDQNKAT-EAAT 59
++S +KT G +L + PA A+S +S+ +RAV++ ++ E
Sbjct: 3 VASPVKTNF-NGVSLVKSPAF-SALSCRKQHRVPISRQ----VRAVISREEKAVDQEDGK 56
Query: 60 KSVDAKDVNGXXXXXXXXXKEGLVDVRAVXXXXXXXXXXXXXXXXDQWELFVNGIGQGIM 119
KS + +N G V AV Q ELF+ IGQG++
Sbjct: 57 KSTNKPLINSSQFPWQRSKYTGSKTVTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGML 116
Query: 120 IQLISEDIDPVTNSG-KSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILIT 178
IQL+SE+IDP T G KS+ES V G LPK V +F A+F VP +FG PGAIL+T
Sbjct: 117 IQLVSEEIDPETGKGRKSLESPVMG-LPKAVKDPRYLVFT--ADFTVPINFGKPGAILVT 173
Query: 179 NLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDL 238
NL E L EI++ + FPANTWIHS+ DN ++RIIF++Q LPS+TP GIK+L
Sbjct: 174 NLLSTEICLSEIIIED-STDTILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKEL 232
Query: 239 RREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGR 298
R +DL+S+RG+GKGERK HERIYDY VYNDLG+P K + + RPVL E PYPRRCRTGR
Sbjct: 233 REKDLVSVRGDGKGERKPHERIYDYDVYNDLGDPRKTERV-RPVLGVPETPYPRRCRTGR 291
Query: 299 PPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXX 358
P DP CESR ++ YVPRDE FEEIK++TF +GR KA+ HN
Sbjct: 292 PLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDI 351
Query: 359 XFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRF 418
FTCFSDID LY S +L + ++ F+ + LNV + L KY+TPAVI+ DRF
Sbjct: 352 PFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGILNVTETLLKYDTPAVIKWDRF 411
Query: 419 AWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL--HGLS 476
AWLRDNEF RQ LAGVNPVNIE LKE PI S LDPA+YGP ES +T+E+I E+ +G +
Sbjct: 412 AWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREVEHYGTT 471
Query: 477 VEKAIEEKRLFILDYHDLLLPFIEKINSLPD--RKTYASRTVFFYNKAGMLRPLAIELSL 534
+EKA+EEKRLF++DYHD+LLPF+EKINS+ + RKTYASRT+FFY+K G LRPLAIELSL
Sbjct: 472 IEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIFFYSKNGALRPLAIELSL 531
Query: 535 PPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIAT 594
PP+ S +NK +YTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWL THASMEPYIIAT
Sbjct: 532 PPTAES-ENKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIAT 590
Query: 595 HRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSF 654
+RQLS+MHP+YKLLHPHMRYTLEINA AR+SLINGGGIIE+ F+PG+YAMELSSAAYKS
Sbjct: 591 NRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSM 650
Query: 655 WRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFY 714
WRFDME LPADL+RRGMAEED S GVRLVI+DYPYAADGLLIW AIK+ VESYV HFY
Sbjct: 651 WRFDMEGLPADLVRRGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESYVKHFY 710
Query: 715 SEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAI 774
S+ S+TSD+ELQAWW EIKNKGH+DK++E WWPKL T +DLS I+T MIW ASGQHAAI
Sbjct: 711 SDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAI 770
Query: 775 NFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDT 834
NFGQYPFGGYVPNRPTL+RKL+PQE DP YE F+ NPQ++FL SLPTQLQATKVMAVQ+T
Sbjct: 771 NFGQYPFGGYVPNRPTLLRKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQET 830
Query: 835 LSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGA 894
LSTHSPDEEYL ++ ++ HW D +V+ F+KFS L +IEK IN RNKD +LK R GA
Sbjct: 831 LSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGA 890
Query: 895 GIPPYELLLPSSGPGVTGRGIPNSISI 921
G+PPYELLLP+S GVTGRGIPNSISI
Sbjct: 891 GMPPYELLLPTSPHGVTGRGIPNSISI 917
|
|
| TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050522-330 zgc:110251 "zgc:110251" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060623-19 zgc:136911 "zgc:136911" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8H016 | LOX6_ORYSJ | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.5378 | 0.9055 | 0.9084 | yes | no |
| O24371 | LOX31_SOLTU | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.5916 | 0.9011 | 0.9080 | N/A | no |
| Q9CAG3 | LOX6_ARATH | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.6440 | 0.9869 | 0.9912 | yes | no |
| O24370 | LOX21_SOLTU | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.5111 | 0.8990 | 0.9210 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.13.11 | 0.691 |
| 3rd Layer | 1.13.11.12 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 921 | |||
| PLN02305 | 918 | PLN02305, PLN02305, lipoxygenase | 0.0 | |
| PLN02264 | 919 | PLN02264, PLN02264, lipoxygenase | 0.0 | |
| PLN02337 | 866 | PLN02337, PLN02337, lipoxygenase | 0.0 | |
| pfam00305 | 667 | pfam00305, Lipoxygenase, Lipoxygenase | 0.0 | |
| cd01751 | 137 | cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox | 7e-35 | |
| smart00308 | 105 | smart00308, LH2, Lipoxygenase homology 2 (beta bar | 3e-11 | |
| pfam01477 | 115 | pfam01477, PLAT, PLAT/LH2 domain | 9e-07 |
| >gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase | Back alignment and domain information |
|---|
Score = 1676 bits (4341), Expect = 0.0
Identities = 727/903 (80%), Positives = 797/903 (88%), Gaps = 5/903 (0%)
Query: 22 PGAVSNGNLRPARV---SKSKFCPIRAVVNSDQNKATEAATKSVDAKDVNGSLLVSSSSS 78
P + G R RV IRAV++S+ E+ +S + SLL SS S
Sbjct: 18 PAFSALGRRRRTRVPISRSPVAGSIRAVISSEDKAVEESGGESANKSVDGSSLLPSSRSK 77
Query: 79 KEGLVDVRAVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDPVTNSGKSVE 138
G +DVRAVITIRKK+KEK+TEK EDQWE F+NGIGQGI+IQL+SE+IDPVT SGKSVE
Sbjct: 78 YAGGIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVE 137
Query: 139 SAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGFDGG 198
S+VRGWLPKP S++ +I +Y A+F VP DFG PGA+L+TNLHGKEFYL+EIV+HGFD G
Sbjct: 138 SSVRGWLPKP--SNDPHIVEYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDG 195
Query: 199 PVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDLRREDLLSIRGNGKGERKHHE 258
P+FFPANTWIHSRKDN ESRIIF+NQAYLPSQTP GIKDLRREDLLS+RGNGKGERK H+
Sbjct: 196 PIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRREDLLSLRGNGKGERKPHD 255
Query: 259 RIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVY 318
RIYDYA YNDLGNPDKD+DLARPVL GEE PYPRRCRTGRPPTK DPLCESRIEKPHPVY
Sbjct: 256 RIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVY 315
Query: 319 VPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKD 378
VPRDETFEEIK+NTFS+GRLKA+LHNLIPSIAA+LSSSDIPFTCFSDIDKLYN G LLK
Sbjct: 316 VPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKT 375
Query: 379 DDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVN 438
++ ++ FL +KQ L+V +RL KY+ PAVI+RDRFAWLRDNEFARQ LAGVNPVN
Sbjct: 376 EEPKDIGLNPFLGNFMKQVLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVN 435
Query: 439 IEFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPF 498
IE LKEFPILSKLDPA+YGPPESA+T+ELIE EL G++VEKAIEEKRLFILDYHD+LLPF
Sbjct: 436 IEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVEKAIEEKRLFILDYHDMLLPF 495
Query: 499 IEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWI 558
IEK+NSLP+RK YASRTVFFY+KAG LRP+AIELSLPP+ SSP NK +YTHGHDATTHWI
Sbjct: 496 IEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWI 555
Query: 559 WKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEI 618
WKLAKAHVCSNDAGVHQLVNHWL THA MEPYIIATHRQLS+MHPIYKLLHPHMRYTLEI
Sbjct: 556 WKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEI 615
Query: 619 NALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSM 678
NALARQSLINGGGIIEA FSPG+YAMELSSAAYKS WRFDMEALPADL+RRGMAEEDPSM
Sbjct: 616 NALARQSLINGGGIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSM 675
Query: 679 PSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGH 738
P GVRLVIEDYPYAADGLLIW AIKEWVESYV HFYSEPNS+TSD+ELQAWW EIKNKGH
Sbjct: 676 PCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEIKNKGH 735
Query: 739 HDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQ 798
+DKRNE WWPKL TKEDLSGI+T MIW ASGQHAAINFGQYPFGGYVPNRPTLMRKL+PQ
Sbjct: 736 YDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQ 795
Query: 799 ENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWIND 858
ENDP YEKF+ NPQ+TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLG++ LHSHWIND
Sbjct: 796 ENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWIND 855
Query: 859 PEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNS 918
EV+ +F+KFSA LEEIEK IN RNKD RLK R GAGIPPYELLLP+SGPGVTGRGIPNS
Sbjct: 856 HEVVKLFNKFSARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNS 915
Query: 919 ISI 921
ISI
Sbjct: 916 ISI 918
|
Length = 918 |
| >gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 921 | |||
| PLN02305 | 918 | lipoxygenase | 100.0 | |
| PLN02264 | 919 | lipoxygenase | 100.0 | |
| PLN02337 | 866 | lipoxygenase | 100.0 | |
| PF00305 | 667 | Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li | 100.0 | |
| cd01751 | 137 | PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re | 100.0 | |
| smart00308 | 105 | LH2 Lipoxygenase homology 2 (beta barrel) domain. | 99.14 | |
| PF01477 | 113 | PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg | 98.67 | |
| cd00113 | 116 | PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin | 98.54 | |
| cd02899 | 109 | PLAT_SR Scavenger receptor protein. A subfamily of | 97.82 | |
| cd01753 | 113 | PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u | 97.5 | |
| cd01756 | 120 | PLAT_repeat PLAT/LH2 domain repeats of family of p | 97.33 | |
| cd01752 | 120 | PLAT_polycystin PLAT/LH2 domain of polycystin-1 li | 96.94 | |
| cd01757 | 114 | PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter | 96.87 | |
| cd01754 | 129 | PLAT_plant_stress PLAT/LH2 domain of plant-specifi | 96.09 |
| >PLN02305 lipoxygenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-279 Score=2406.18 Aligned_cols=902 Identities=81% Similarity=1.304 Sum_probs=843.7
Q ss_pred ccccccccCCCCccccCCCccccccccCccc---ceEEEEeCCCccchhhhccccccccccCCeeeccCCC-CcceEEEE
Q 002436 11 TGPALRRVPAIPGAVSNGNLRPARVSKSKFC---PIRAVVNSDQNKATEAATKSVDAKDVNGSLLVSSSSS-KEGLVDVR 86 (921)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 86 (921)
.|-.++.+|+ .-++|+.|+.+|--+++. +|||||++++ ||.+...+.--+|-+-||.+..++++ -....+||
T Consensus 10 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 85 (918)
T PLN02305 10 SGVSLRASPA---FSALGRRRRTRVPISRSPVAGSIRAVISSED-KAVEESGGESANKSVDGSSLLPSSRSKYAGGIDVR 85 (918)
T ss_pred CceEEeeCcc---cccccceeeeecccccCCCCCceeEEecccc-cccccccccccccccccccccccccchhccCCeEE
Confidence 3445666776 455688888777666543 8999999876 55554455555677777777766632 22346999
Q ss_pred EEEEEEecccccccccchhhhhhhhhhcCCcEEEEEeecccCCCCCCC-ccccccccccccCCCCCCCcceEEEEEEEee
Q 002436 87 AVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDPVTNSG-KSVESAVRGWLPKPVTSSNVNIFQYEANFGV 165 (921)
Q Consensus 87 ~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 165 (921)
|+||||+|++++++++.++++|+++|++||+|+|||||++++|+||+| ++ +++|++|++++...+++ ++|+++|+|
T Consensus 86 ~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~-~~~l~~~~~~~~~~~~~--~~~~~~f~~ 162 (918)
T PLN02305 86 AVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSV-ESSVRGWLPKPSNDPHI--VEYAADFTV 162 (918)
T ss_pred EEEEEEeecccchhhcccchhhHHHHhhCCeEEEEEEeccccCCCCCcccc-cchhhccccCCCCCCCc--eEEEEEEee
Confidence 999999999999999999999999999999999999999999999988 66 99999999874432667 799999999
Q ss_pred cCCCCCceEEEEEecCCCceeEeEEEEeecCCCeEEEeecccccCCCCCCCCeEEeeccccCcCCCChhhHHHHHHHHHh
Q 002436 166 PSDFGNPGAILITNLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDLRREDLLS 245 (921)
Q Consensus 166 ~~~fG~pgAi~v~n~h~~e~fl~~i~l~~~~~~~v~F~CnsWV~~~~~~~~~rifF~n~~yLP~~tp~~l~~~Re~EL~~ 245 (921)
|++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||+|||+|||++|++|||+||++
T Consensus 163 ~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re~eL~~ 242 (918)
T PLN02305 163 PFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRREDLLS 242 (918)
T ss_pred ccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCcccCCCCCc
Q 002436 246 IRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETF 325 (921)
Q Consensus 246 lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg~~~pyPRR~rTgr~~~~~dp~~e~~~~~~~~~yvPrDe~f 325 (921)
|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+||++||+||||...+..+||||||+|
T Consensus 243 lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~YvPrDE~f 322 (918)
T PLN02305 243 LRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPRDETF 322 (918)
T ss_pred hcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcCCCCCCCc
Confidence 99999999999999999999999999999999999999996699999999999999999999999765556899999999
Q ss_pred chhhhcccccchHHHHHHhhHHHHHHhccCCCCCCCChHhHHHHhhCCccCCCchhhchhhhhH-HH-HHHHHHhhcccc
Q 002436 326 EEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKDDDEQNGRSKLF-LA-TVIKQFLNVGDR 403 (921)
Q Consensus 326 ~~~K~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~f~sf~di~~Ly~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 403 (921)
+++|++||+++++|+++|.++|.|+++++.++++|+||+||++||++|+++|.. .....+.+ +| .+.+.++++++.
T Consensus 323 ~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~--~~~~~~~~p~~~~~~~~i~~~~~~ 400 (918)
T PLN02305 323 EEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTE--EPKDIGLNPFLGNFMKQVLSVSER 400 (918)
T ss_pred ccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCch--hhhhhhcCCchHHHHHHhhhcccc
Confidence 999999999999999999999999999988899999999999999999999852 11222223 21 344445888999
Q ss_pred cccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCCCCccCCCCCCcchHHHHHhhhcCCCHHHHHhc
Q 002436 404 LFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVEKAIEE 483 (921)
Q Consensus 404 ~~~fp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l~G~Tl~eal~~ 483 (921)
++|||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+++|+||+|||+.+|+|+||+|||++
T Consensus 401 ~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G~TleeAl~~ 480 (918)
T PLN02305 401 LLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVEKAIEE 480 (918)
T ss_pred cccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCCCcHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEEecCCCCCCCCCCCceeeCCCCCCChhHHHHHH
Q 002436 484 KRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAK 563 (921)
Q Consensus 484 grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~VfTP~d~~~~~~~W~LAK 563 (921)
|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++..++||||+++++++|.|+|||
T Consensus 481 ~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~w~W~LAK 560 (918)
T PLN02305 481 KRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWIWKLAK 560 (918)
T ss_pred CCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777677789999987777899999999
Q ss_pred HHHhhhhhhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhccccchhhccchHHHhhccccCCccccccccCchhH
Q 002436 564 AHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA 643 (921)
Q Consensus 564 ~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~ 643 (921)
|||++||++|||+|+||++||++|||||||||||||++|||||||+||||+||+||++||++|||+||+||++|++|+|+
T Consensus 561 ~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~fspg~~~ 640 (918)
T PLN02305 561 AHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFSPGKYA 640 (918)
T ss_pred HHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceeeeeccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCccCCchHHHhcCCCCCCCCCCccccccccCCccchhhHHHHHHHHHHHHHHcccccCcccccCCC
Q 002436 644 MELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSD 723 (921)
Q Consensus 644 ~elss~~Yk~~w~F~~~~lP~DL~~RGva~~D~~~p~gl~l~lpdYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~~V~~D 723 (921)
|||++++|++.|+|++++||+||++|||+++|+++||||+|.|||||||+|||+||+||++||++||++||++|++|++|
T Consensus 641 ~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~~D~~V~~D 720 (918)
T PLN02305 641 MELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSD 720 (918)
T ss_pred HHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCCChhhhccC
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhheecccccccccccCCcccccccCCcccccccCCCCCCChh
Q 002436 724 VELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPG 803 (921)
Q Consensus 724 ~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~IIf~aSaqHAAVNfgQy~y~gfvPN~P~~lr~p~P~~g~~e 803 (921)
.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||++||++++.+
T Consensus 721 ~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp~P~~~~~~ 800 (918)
T PLN02305 721 LELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQENDPD 800 (918)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCCCCCCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred hhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002436 804 YEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRN 883 (921)
Q Consensus 804 ~~~l~~~pe~~~L~tLP~~~qa~~~m~~~~lLS~h~~de~yLG~~~~~~~~~~~d~~~~~A~~~F~~~L~~Ie~~I~~RN 883 (921)
|++|+.+||++||++||++.||+.+|+++++||+|++||+||||+.+.+..|+.|+++++|+++|+++|++||++|++||
T Consensus 801 ~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~eIE~~I~~RN 880 (918)
T PLN02305 801 YEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKTINERN 880 (918)
T ss_pred HHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987222799999999999999999999999999999
Q ss_pred cccccccccCCCCCCceeecCCCCCCCccCCcCccccC
Q 002436 884 KDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921 (921)
Q Consensus 884 ~~~~lknr~g~~~~PY~~L~Ps~~~g~t~~gIPNSIsI 921 (921)
++++||||+||+++||+||+|+++||||||||||||||
T Consensus 881 ~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 881 KDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918 (918)
T ss_pred CCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence 99999999999999999999999999999999999998
|
|
| >PLN02264 lipoxygenase | Back alignment and domain information |
|---|
| >PLN02337 lipoxygenase | Back alignment and domain information |
|---|
| >PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain | Back alignment and domain information |
|---|
| >cd02899 PLAT_SR Scavenger receptor protein | Back alignment and domain information |
|---|
| >cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase | Back alignment and domain information |
|---|
| >cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function | Back alignment and domain information |
|---|
| >cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins | Back alignment and domain information |
|---|
| >cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family | Back alignment and domain information |
|---|
| >cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 921 | ||||
| 1ik3_A | 857 | Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope | 0.0 | ||
| 1rov_A | 857 | Lipoxygenase-3 Treated With Cumene Hydroperoxide Le | 0.0 | ||
| 2iuj_A | 853 | Crystal Structure Of Soybean Lipoxygenase-B Length | 0.0 | ||
| 3pzw_A | 839 | Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | 0.0 | ||
| 3bnd_A | 839 | Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | 0.0 | ||
| 2sbl_B | 839 | The Three-Dimensional Structure Of An Arachidonic A | 0.0 | ||
| 3bnb_A | 839 | Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | 0.0 | ||
| 1fgr_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng | 0.0 | ||
| 1fgq_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng | 0.0 | ||
| 3bne_A | 839 | Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | 0.0 | ||
| 1fgm_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng | 0.0 | ||
| 1fgt_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng | 0.0 | ||
| 1fgo_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng | 0.0 | ||
| 3bnc_A | 839 | Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | 0.0 | ||
| 1y4k_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng | 0.0 | ||
| 2iuk_A | 864 | Crystal Structure Of Soybean Lipoxygenase-D Length | 0.0 | ||
| 3dy5_A | 1066 | Allene Oxide Synthase 8r-Lipoxygenase From Plexaura | 6e-52 | ||
| 3fg1_A | 696 | Crystal Structure Of Delta413-417:gs Lox Length = 6 | 7e-52 | ||
| 2fnq_A | 699 | Insights From The X-Ray Crystal Structure Of Coral | 2e-51 | ||
| 3fg4_A | 696 | Crystal Structure Of Delta413-417:gs I805a Lox Leng | 3e-51 | ||
| 3fg3_A | 696 | Crystal Structure Of Delta413-417:gs I805w Lox Leng | 6e-51 | ||
| 3vf1_A | 698 | Structure Of A Calcium-Dependent 11r-Lipoxygenase S | 7e-51 | ||
| 3v92_B | 691 | S663a Stable-5-Lox Length = 691 | 7e-47 | ||
| 3o8y_A | 691 | Stable-5-Lipoxygenase Length = 691 | 9e-47 | ||
| 3v98_A | 691 | S663d Stable-5-Lox Length = 691 | 1e-46 | ||
| 1lox_A | 662 | Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | 3e-45 | ||
| 2p0m_A | 662 | Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy | 3e-45 | ||
| 3rde_A | 573 | Crystal Structure Of The Catalytic Domain Of Porcin | 2e-44 | ||
| 3d3l_A | 541 | The 2.6 A Crystal Structure Of The Lipoxygenase Dom | 7e-42 |
| >pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 | Back alignment and structure |
|
| >pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 | Back alignment and structure |
| >pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 | Back alignment and structure |
| >pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | Back alignment and structure |
| >pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | Back alignment and structure |
| >pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 | Back alignment and structure |
| >pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 | Back alignment and structure |
| >pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 | Back alignment and structure |
| >pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | Back alignment and structure |
| >pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 | Back alignment and structure |
| >pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 | Back alignment and structure |
| >pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 | Back alignment and structure |
| >pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 | Back alignment and structure |
| >pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 | Back alignment and structure |
| >pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 | Back alignment and structure |
| >pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 | Back alignment and structure |
| >pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 | Back alignment and structure |
| >pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 | Back alignment and structure |
| >pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | Back alignment and structure |
| >pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 | Back alignment and structure |
| >pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 | Back alignment and structure |
| >pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp Target) Length = 541 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 | Back alignment and structure |
|---|
Score = 921 bits (2381), Expect = 0.0
Identities = 366/845 (43%), Positives = 504/845 (59%), Gaps = 21/845 (2%)
Query: 85 VRAVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDPVTNSGK-SVESAVRG 143
++ + + K + ++ + +G+ + +QLIS GK ++ + G
Sbjct: 8 IKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 144 WLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGF-DGGPVFF 202
+ + + +F G PGA I N EF+L + + + G + F
Sbjct: 67 INTS-LPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRF 125
Query: 203 PANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYD 262
N+W+++ K RI F N Y+PS+TPA + R E+L S+RGNG GERK ++RIYD
Sbjct: 126 VCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYD 185
Query: 263 YAVYNDLGNPDKDKDLARPVLSG-EERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPR 321
Y VYNDLGNPDK + LARPVL G PYPRR RTGR PT TDP E + YVPR
Sbjct: 186 YDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQ---GEVFYVPR 242
Query: 322 DETFEEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIP--FTCFSDIDKLYNSGFLLKDD 379
DE +K K++ + P+ ++ P F F D+ LY G L D
Sbjct: 243 DENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRD 302
Query: 380 DEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNI 439
+ + + G + K+ P V++ + AW+ D EFAR+ +AGVNP I
Sbjct: 303 VISTIIPLPVIKELYR---TDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVI 359
Query: 440 EFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFI 499
L+EFP S LDPAIYG S IT + ++ L G ++++A+ +RLF+LDYHD+ +P++
Sbjct: 360 RGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYV 417
Query: 500 EKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPS--RSSPQNKHIYTHGHDATTHW 557
+IN L KTYA+RT+ F + G L+P+AIELSLP S S + +
Sbjct: 418 RQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVEST 477
Query: 558 IWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLE 617
IW LAKA+V ND+ HQL++HWL THA+MEP++IATHR LS +HPIYKLL PH R +
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 618 INALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPS 677
INALARQSLIN GIIE +F P +Y++E+SSA YK+ W F +ALPADL++RG+A +DPS
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPS 596
Query: 678 MPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKG 737
P GVRL+IEDYPYAADGL IW AIK WV+ YV +Y+ + V +D ELQ WW E KG
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 738 HHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVP 797
H D +++ WWPKL+T EDL + I+IW AS HAA+NFGQYP+GG + NRPT R+L+P
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP 716
Query: 798 QENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWIN 857
++ P YE+ + N + +L ++ ++L ++V + LSTH+ DE YLGQ + HW +
Sbjct: 717 EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDN--PHWTS 774
Query: 858 DPEVLNMFDKFSANLEEIEKIINTRNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIP 916
D + L F KF L+EIE+ + RN D L+G R G PY LL PSS G+T RGIP
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 917 NSISI 921
NSISI
Sbjct: 835 NSISI 839
|
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 | Back alignment and structure |
|---|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 921 | |||
| 2iuk_A | 864 | SEED lipoxygenase; iron, dioxygenase, metal-bindin | 100.0 | |
| 1f8n_A | 839 | Lipoxygenase-1; dioxygenase, metalloprotein, fatty | 100.0 | |
| 2iuj_A | 853 | Lipoxygenase L-5; dioxygenase, metal-binding, oxid | 100.0 | |
| 1lox_A | 662 | 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot | 100.0 | |
| 3v98_A | 691 | Arachidonate 5-lipoxygenase; dioxygenase, oxidored | 100.0 | |
| 3fg1_A | 696 | Allene oxide synthase-lipoxygenase protein; arichi | 100.0 | |
| 3vf1_A | 698 | 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik | 100.0 | |
| 3dy5_A | 1066 | Allene oxide synthase-lipoxygenase protein; fusion | 100.0 | |
| 3rde_A | 573 | Arachidonate 12-lipoxygenase, 12S-type; C-terminal | 100.0 | |
| 3d3l_A | 541 | Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir | 100.0 | |
| 2wxu_A | 370 | Phospholipase C; cytolysis, hydrolase, hemolysis, | 97.63 | |
| 1olp_A | 370 | Alpha-toxin; zinc phospholipase C, GAS gangrene de | 97.62 | |
| 3cwz_B | 384 | RAB6IP1, RAB6-interacting protein 1; RAB small GTP | 93.89 |
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-261 Score=2280.27 Aligned_cols=823 Identities=44% Similarity=0.776 Sum_probs=789.2
Q ss_pred EEEEEEEEEEecccccccccc----------------------hhhhhhhhhhcCCcEEEEEeecccCCCCCCC-ccccc
Q 002436 83 VDVRAVITIRKKLKEKLTEKI----------------------EDQWELFVNGIGQGIMIQLISEDIDPVTNSG-KSVES 139 (921)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~~~----------------------~~~~d~~~~~~g~~v~lqLvS~~~~~~~~~~-~~~~~ 139 (921)
.+|||+|+||+|++++++++. ++++|+++|++|++|+|||||++++|+||+| +|+++
T Consensus 9 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~~~~~~~k~~~~~ 88 (864)
T 2iuk_A 9 QKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGKEV 88 (864)
T ss_dssp CCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEEEecccccccccccccccccccccccccccccccccchhhhHHHhccCeEEEEEEecccCCCCCCCcCCCcc
Confidence 479999999999999999888 8999999999999999999999999999999 99999
Q ss_pred cccccccC-CCCCCCcceEEEEEEEeecCCCCCceEEEEEecCCCceeEeEEEEeecCC-CeEEEeecccccCCCCCCCC
Q 002436 140 AVRGWLPK-PVTSSNVNIFQYEANFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGFDG-GPVFFPANTWIHSRKDNAES 217 (921)
Q Consensus 140 ~~~~~~~~-~~~~~~~~~~~~~~~f~~~~~fG~pgAi~v~n~h~~e~fl~~i~l~~~~~-~~v~F~CnsWV~~~~~~~~~ 217 (921)
+|++|+.+ +..++++ ++|+|+|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+.+
T Consensus 89 ~~~~~~~~~~~~~~~~--~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~ 166 (864)
T 2iuk_A 89 YLEKHLPTLPTLGARQ--DAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKN 166 (864)
T ss_dssp ECCEEECSCSSCCTTC--EEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSC
T ss_pred cccccccCCCcCCCCc--EEEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCCCCC
Confidence 99999955 4467788 89999999999999999999999999999999999999997 99999999999999999999
Q ss_pred eEEeeccccCcCCCChhhHHHHHHHHHhhhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCC-CCCCCCCCCCC
Q 002436 218 RIIFKNQAYLPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSG-EERPYPRRCRT 296 (921)
Q Consensus 218 rifF~n~~yLP~~tp~~l~~~Re~EL~~lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg-~~~pyPRR~rT 296 (921)
||||+||+|||++||++|++|||+||++|||||+||||+||||||||||||||+||++++ |||||| ++|||||||||
T Consensus 167 RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR~rt 244 (864)
T 2iuk_A 167 RIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRVRT 244 (864)
T ss_dssp EEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCEECC
T ss_pred ceeccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--CcccCCCCCCCCCccccC
Confidence 999999999999999999999999999999999999999999999999999999999988 999999 89999999999
Q ss_pred CCCCCCCCCCCcccCCCCCCcccCCCCCcchhhhcccccchHHHHHHhhHHHHHHhcc---CCCCCCCChHhHHHHhhCC
Q 002436 297 GRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLS---SSDIPFTCFSDIDKLYNSG 373 (921)
Q Consensus 297 gr~~~~~dp~~e~~~~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~---~~~~~f~sf~di~~Ly~~~ 373 (921)
||+|+++||.+|||+ . +||||||+|++.|.+||.++++|++++.++|+++++++ .+..+|+||+||++||++|
T Consensus 245 gr~~~~~dp~~e~~~-~---~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g 320 (864)
T 2iuk_A 245 GRERTRTDPNSEKPG-E---VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGG 320 (864)
T ss_dssp CCCBCSSCTTSBCCC-C---CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSC
T ss_pred CCCCCCCCCCccccc-c---CCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHHHhcc
Confidence 999999999999994 2 99999999999999999999999999999999999884 2578999999999999999
Q ss_pred ccCCCchhhchhhhhH--HHHHHHHHhhcccccccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCC
Q 002436 374 FLLKDDDEQNGRSKLF--LATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKL 451 (921)
Q Consensus 374 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~fp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~l 451 (921)
+++|+ ...+.+ ++++++++++++++++|||+|+||+.++++|++|+|||||+|||+||++|++|++||++|+|
T Consensus 321 ~~l~~-----~~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~l 395 (864)
T 2iuk_A 321 IKLPT-----DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTL 395 (864)
T ss_dssp EECCH-----HHHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCCCS
T ss_pred ccCch-----hhhcccCcHHHHHHHhhccccchhcCCCcceecccchhhhchHHHHHHHhcCCCchhhhhhhccCCcccC
Confidence 98885 222232 23455666778899999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCcchHHHHHhhhcCCCHHHHHhcCCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEE
Q 002436 452 DPAIYGPPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIE 531 (921)
Q Consensus 452 d~~~yg~~~s~IT~e~i~~~l~G~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIq 531 (921)
||++||+++|+||+|||+..++|+||+|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+|||||
T Consensus 396 dp~~yg~~~s~it~e~i~~~l~g~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlAIq 475 (864)
T 2iuk_A 396 DPTLYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIE 475 (864)
T ss_dssp CHHHHCCCCCCCCHHHHGGGTTTCCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEE
T ss_pred ChhhcCCcccccCHHHHhhccCCCcHHHHHhcCCEEEecchhhhccchhhcccCCCceeecceEEEEEcCCCCEeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCC--CCCCceeeCCCCCCChhHHHHHHHHHhhhhhhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhcc
Q 002436 532 LSLPPSRSS--PQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLH 609 (921)
Q Consensus 532 L~~~~~~~~--~~~~~VfTP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~ 609 (921)
|++|+++++ ++.++||||+|+++++|.|+|||+||++||+++||+++||++||++||||+|||+||||.+|||||||.
T Consensus 476 Ls~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~ 555 (864)
T 2iuk_A 476 LSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLY 555 (864)
T ss_dssp EEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHG
T ss_pred eeCCCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCCccCchHHhhH
Confidence 999876544 367999999987778899999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhccchHHHhhccccCCccccccccCchhHHHHHHHHHhccccCCccCCchHHHhcCCCCCCCCCCccccccccCC
Q 002436 610 PHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDY 689 (921)
Q Consensus 610 PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~~elss~~Yk~~w~F~~~~lP~DL~~RGva~~D~~~p~gl~l~lpdY 689 (921)
||||+||+||++||+.|||+||++|++|++|+|+|||++++|++ |+|++++||+||++|||+++|+++||||||.||||
T Consensus 556 PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~elss~ayk~-w~f~~~~LP~DL~~RGva~~D~~~p~gl~l~ipdY 634 (864)
T 2iuk_A 556 PHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKN-WVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDY 634 (864)
T ss_dssp GGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGSSHHHHHHHTTSEEECSSSTTSEEESSSCC
T ss_pred HHHHHHHHHHHHHHHhccCCCCceeeeccCchhHHHHHHHHHcc-CCCccccCcHHHHhcCCCCCCccccccccccCCCC
Confidence 99999999999999999999999999999999999999999997 99999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHcccccCcccccCCChHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhheecccc
Q 002436 690 PYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASG 769 (921)
Q Consensus 690 pYrdDGL~IW~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~IIf~aSa 769 (921)
|||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+||+
T Consensus 635 pYadDGL~iW~AIk~~V~~yV~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~IIf~aSa 714 (864)
T 2iuk_A 635 PYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASA 714 (864)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTTGGGTTCTTCCCSSSHHHHHHHHHHHHHHHTH
T ss_pred CccccHHHHHHHHHHHHHHHHHHHcCCchhhcCCHHHHHHHHHHHhcCCCCCCCCCCCCCcCCHHHHHHHhheeeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCcccccccCCcccccccCCCCCCChhhhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCccccccc
Q 002436 770 QHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVN 849 (921)
Q Consensus 770 qHAAVNfgQy~y~gfvPN~P~~lr~p~P~~g~~e~~~l~~~pe~~~L~tLP~~~qa~~~m~~~~lLS~h~~de~yLG~~~ 849 (921)
||||||||||+|+||+||+|++||+|||++|+.+|++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|+
T Consensus 715 qHAAVNFgQydy~gfvPN~P~~~r~p~P~~G~~~~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~yLG~~~ 794 (864)
T 2iuk_A 715 LHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERE 794 (864)
T ss_dssp HHHHHHTTHHHHHTSTTTSCCCCCSCCCCTTSHHHHHHHHCHHHHHHTTSCCHHHHHHHHHHHHHHTCCCSSCCBTTCCS
T ss_pred hhhhhccccchhhcccCCCChhhcCCCCCCCchhHhhhhhChHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCcccccccC
Confidence 99999999999999999999999999998888999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCCCCceeecCCCCCCCccCCcCccccC
Q 002436 850 QLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921 (921)
Q Consensus 850 ~~~~~~~~d~~~~~A~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Ps~~~g~t~~gIPNSIsI 921 (921)
+ +.|++|+++++|+++|+++|++||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 795 ~--~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s~~g~t~~~IPNSIsI 864 (864)
T 2iuk_A 795 T--PNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864 (864)
T ss_dssp C--TTSCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCCCSSSCSCCCBSSCCC
T ss_pred c--cccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCCCCCCceeeCCCCCCCcccCCCCCcccC
Confidence 7 799999999999999999999999999999999999999999999999999999999999999999998
|
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... | Back alignment and structure |
|---|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A | Back alignment and structure |
|---|
| >1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 | Back alignment and structure |
|---|
| >3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 921 | ||||
| d3bnea1 | 690 | a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom | 0.0 | |
| d2p0ma1 | 551 | a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory | 0.0 | |
| d3bnea2 | 143 | b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl | 6e-34 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Score = 926 bits (2394), Expect = 0.0
Identities = 340/702 (48%), Positives = 452/702 (64%), Gaps = 19/702 (2%)
Query: 227 LPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSG- 285
+PS+TPA + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G
Sbjct: 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60
Query: 286 EERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNL 345
PYPRR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 61 STFPYPRRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIV 117
Query: 346 IPSIAASLSSSDIP--FTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFL-NVGD 402
P+ ++ P F F D+ LY G L D S + VIK+ G
Sbjct: 118 QPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI----STIIPLPVIKELYRTDGQ 173
Query: 403 RLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESA 462
+ K+ P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S
Sbjct: 174 HILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSK 233
Query: 463 ITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKA 522
IT + ++ + G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F +
Sbjct: 234 ITADSLDLD--GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLRED 291
Query: 523 GMLRPLAIELSLPPS--RSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW 580
G L+P+AIELSLP S S + + IW LAKA+V ND+ HQL++HW
Sbjct: 292 GTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW 351
Query: 581 LMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPG 640
L THA+MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI E +F P
Sbjct: 352 LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPS 411
Query: 641 RYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWC 700
+Y++E+SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW
Sbjct: 412 KYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWA 470
Query: 701 AIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGII 760
AIK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 471 AIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVC 530
Query: 761 TIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLP 820
I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++
Sbjct: 531 LIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTIT 590
Query: 821 TQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIIN 880
++L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 591 SKLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLV 648
Query: 881 TRNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 649 RRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 921 | |||
| d3bnea1 | 690 | Lipoxigenase, C-terminal domain {Soybean (Glycine | 100.0 | |
| d2p0ma1 | 551 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 100.0 | |
| d3bnea2 | 143 | Plant lipoxigenase {Soybean (Glycine max), isozyme | 100.0 | |
| d2p0ma2 | 111 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 97.13 | |
| d1olpa2 | 121 | Alpha-toxin, C-terminal domain {Clostridium absonu | 96.52 | |
| d1ca1a2 | 121 | Alpha-toxin, C-terminal domain {Clostridium perfri | 95.88 | |
| d1rp1a1 | 113 | Pancreatic lipase, C-terminal domain {Dog (Canis f | 82.02 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Probab=100.00 E-value=6e-221 Score=1912.60 Aligned_cols=683 Identities=49% Similarity=0.875 Sum_probs=660.3
Q ss_pred CcCCCChhhHHHHHHHHHhhhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCC-CCCCCCCCCCCCCCCCCCCC
Q 002436 227 LPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSG-EERPYPRRCRTGRPPTKTDP 305 (921)
Q Consensus 227 LP~~tp~~l~~~Re~EL~~lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg-~~~pyPRR~rTgr~~~~~dp 305 (921)
||+|||++|++|||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+||++||
T Consensus 1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp 80 (690)
T d3bnea1 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP 80 (690)
T ss_dssp CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999 78999999999999999999
Q ss_pred CCcccCCCCCCcccCCCCCcchhhhcccccchHHHHHHhhHHHHHHhcc--CCCCCCCChHhHHHHhhCCccCCCchhhc
Q 002436 306 LCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLS--SSDIPFTCFSDIDKLYNSGFLLKDDDEQN 383 (921)
Q Consensus 306 ~~e~~~~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~--~~~~~f~sf~di~~Ly~~~~~~~~~~~~~ 383 (921)
++|||... +||||||+|+++|++||+++++|+++|.++|.++++++ .+.++|+||+||++||++|+++|.+
T Consensus 81 ~~e~r~~~---~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~~---- 153 (690)
T d3bnea1 81 NTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRD---- 153 (690)
T ss_dssp TSBCCCSS---CCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCHH----
T ss_pred CcccCCCC---CCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCchh----
Confidence 99999765 99999999999999999999999999999999999875 4578999999999999999988852
Q ss_pred hhhhhH-HHHHHHHHhhcccccccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCCCCccCCCCCCc
Q 002436 384 GRSKLF-LATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESA 462 (921)
Q Consensus 384 ~~~~~~-~~~~~~~~~~~~~~~~~fp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~ 462 (921)
.+.+.+ ++.++++++++++.++|||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+||+++||+++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~s~ 233 (690)
T d3bnea1 154 VISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSK 233 (690)
T ss_dssp HHHHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCCCC
T ss_pred hhhhcccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCchhhh
Confidence 222222 4567888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHhhhcCCCHHHHHhcCCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEEecCCCCCCC--
Q 002436 463 ITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSS-- 540 (921)
Q Consensus 463 IT~e~i~~~l~G~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIqL~~~~~~~~-- 540 (921)
||+++++ ++|+||++||++|||||+||||+++|++.++|...+++.|||+||||++++|+|+||||||+++++.++
T Consensus 234 it~~~i~--l~G~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~~~ 311 (690)
T d3bnea1 234 ITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS 311 (690)
T ss_dssp CCGGGCC--CTTCCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCCC
T ss_pred hhHhhhc--cCccHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCCcccC
Confidence 9999985 789999999999999999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCceeeCCCCCCChhHHHHHHHHHhhhhhhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhccccchhhccchH
Q 002436 541 PQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINA 620 (921)
Q Consensus 541 ~~~~~VfTP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~ 620 (921)
++.++||||+|+++++|.|+|||+||++||+++||+|+||++||++||||||||+||||.+|||||||.||||+||+||+
T Consensus 312 ~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~ 391 (690)
T d3bnea1 312 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINA 391 (690)
T ss_dssp CCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHH
T ss_pred CCCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHHHHHHHHhcCCccCCHHHhcchhhhhhHHHHH
Confidence 67899999999777789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccCCccccccccCchhHHHHHHHHHhccccCCccCCchHHHhcCCCCCCCCCCccccccccCCccchhhHHHHH
Q 002436 621 LARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWC 700 (921)
Q Consensus 621 lAR~~LI~~gGiie~~f~~G~~~~elss~~Yk~~w~F~~~~lP~DL~~RGva~~D~~~p~gl~l~lpdYpYrdDGL~IW~ 700 (921)
+||++|||+||++|++|++|+++|||++++|++ |+|++++||+||++|||+++|+++|||++|.|||||||||||+||+
T Consensus 392 ~AR~~LI~~gGiie~~~~~~~~~~el~~~ayk~-w~f~~~~lP~dL~~RGv~~~d~~~p~g~~l~ipdYPYrdDgL~iW~ 470 (690)
T d3bnea1 392 LARQSLINANGIAETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWA 470 (690)
T ss_dssp HHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGGSHHHHHHHTTSEEECTTSTTSEEESSSSCHHHHHHHHHHH
T ss_pred HHHHhccCCCCeeeecccCchhHHHHHHHHHhc-CcccccCCHHHHHHcCCCcccccccccccccCCCCchhhhHHHHHH
Confidence 999999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccccCcccccCCChHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhheecccccccccccCCcc
Q 002436 701 AIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYP 780 (921)
Q Consensus 701 AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~IIf~aSaqHAAVNfgQy~ 780 (921)
||++||++||++||++|++|++|.|||+||+||+++|||++++.+|||+|+|+++||++||+|||+|||||||||||||+
T Consensus 471 AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~ 550 (690)
T d3bnea1 471 AIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 550 (690)
T ss_dssp HHHHHHHHHGGGTCSSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTSCCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHH
T ss_pred HHHHHHHHHhhhccCCccccccCHHHHHHHHHHhcccCCCCCCCCCCCCCCCHHHHHHHHHHHHhhccHHHhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccccCCCCCCChhhhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCcccccccccCCCCCCCHH
Q 002436 781 FGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPE 860 (921)
Q Consensus 781 y~gfvPN~P~~lr~p~P~~g~~e~~~l~~~pe~~~L~tLP~~~qa~~~m~~~~lLS~h~~de~yLG~~~~~~~~~~~d~~ 860 (921)
|+||+||+|++||++||+++++++++++.+||+++|++||++.||+.+|+++++||+|++||+|||+|++ +.|+.|++
T Consensus 551 y~gfvPN~P~~~r~~~P~~~~~~~~~~~~~~e~~~L~tLP~~~qa~~~~~~~~~LS~~~~de~yLG~~~~--~~~~~D~~ 628 (690)
T d3bnea1 551 YGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDN--PHWTSDSK 628 (690)
T ss_dssp HHSSTTTSCCCBCCCCCCTTSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSC--TTSCSCHH
T ss_pred ccCcCCCCChHhcCCCCCCCChhhhhhhhchHHHHHHhCCcHHHHHHHHHHHHHhccCCCCcccCCCCCC--cccccChH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccc-cccCCCCCCceeecCCCCCCCccCCcCccccC
Q 002436 861 VLNMFDKFSANLEEIEKIINTRNKDFRLK-GRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921 (921)
Q Consensus 861 ~~~A~~~F~~~L~~Ie~~I~~RN~~~~lk-nr~g~~~~PY~~L~Ps~~~g~t~~gIPNSIsI 921 (921)
+++|+++|+++|++||++|++||+++++| ||+||+++||+||+|+++||||||||||||||
T Consensus 629 ~~~a~~~F~~~L~~Ie~~I~~RN~~~~~~~nr~g~~~~PY~~L~Ps~~~g~t~~gIPnSIsI 690 (690)
T d3bnea1 629 ALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690 (690)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccccccCCCCCCCccccCCCCCCCcCcCCCCCcccC
Confidence 99999999999999999999999999999 99999999999999999999999999999998
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} | Back information, alignment and structure |
|---|
| >d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} | Back information, alignment and structure |
|---|
| >d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|