Citrus Sinensis ID: 002475

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------
MQNSNNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIDSDAAASSSSLSSSSLSSSNGFNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSKKEEKAVASLAVTQSNSVTQTSSVTQLSGRTRGLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLATLLLIRDIQSKRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSGD
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEcccccHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHccccccEEEEEEcccccHHHHHccccccccEEEEEcccccccHHHHHHHHHHHHHccccccccEEEEEEEcccccHHHHHHHcccccEEEEcHHHHHHHHHHHHccccHHHHHHHHHcccccEEEEEEccccccccHHHHHHHccccEEEEEEEEEcccEEEEccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHcccccccccccEEEEEEEcccccHHHHHccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccEEEEEEEcccccccEEccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHcccEEEEEEEcccccEEEcccccccccccccccEEEEEEccc
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccEEEEccccHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHccHHHccEEEEEcccccccHHHHHHHHHHHHHHHccccccccEEEEEEccccHHHHHHHccccEEEEEcHHHHHHHHHHHHHcccHHHHHHHHHcccccEEEEEcccccccccHHHHHHHccccEEEEEEEEccccEEccccccccEcccccEEEEEEcccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHcccccccccEEEEEEEEcccccHHHHHccccccccEEEEEEccccccccHHHcHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHcccccEEEEEEEccccccccEccccccEEEcHHHHHHHHHHHHccHHHHHHHHHHHcccccEEEEEcHHHHccccccccHHHHHHHHHHcccEEEEEEEcccccEEEccccccccEEEccccEEEEEEccc
mqnsnndeasvtkttekpplpkrsktisddthfpgplfpavrrtdkpfdlrvsidsdaaasssslsssslsssngfnerdwmypsflgphmgrrrikvkpsklefkgnEEKKRIQELGSKKEEKAVASLAVTQsnsvtqtssvtqlsgrtrgLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCsyksiagnngidvlhtdnnsdsnfgnadgRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRtkknkeevplkkrVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVadsgnhadrvgtgprIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMgtsvicrsgsplilaDLKKVSVSKARAIIVLasdenadqsDARALRVVLSLTGVKEGLRGHVVVEmsdldneplvkLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENaefyikrwpqlddlrfeevvisfpdaipcGIKVAaeggkiilnpddnyvlkegdevlviaedddtyapgplpevvckrsflkipdppkypekilfcgwrrDIDDMIMVLEAFLapgselwmlnevpekerekkltdggldisglMNIKLVHREGNAVIRRHLeslpletfDSILILADesledsivhsdSRSLATLLLIRDIqskrlpyrdtkptslrlsgfshSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEegnemcikpaefylfdqeeisffdIMIRGRQRQEIVIGYRLanteraiinpsqkseprkwsldDVFVVISSGD
mqnsnndeasvtkttekpplpkrsktisddthfpgplfpavrrtdKPFDLRVSIDSdaaasssslsssslsssngfneRDWMYPsflgphmgrrrikvkpsklefkgneekkriqelgskkeEKAVASLavtqsnsvtqtssvtqlsgrtrgLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNfskrtkknkeevplkkrvaysVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVanksigggvIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVlasdenadqsdARALRVVLSltgvkeglrGHVVvemsdldneplVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRsflkipdppkypEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLATLLLIRdiqskrlpyrdtkptslrlsgfshSSWIREMQQASDKSIIISeildsrtrnlvsvSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAiinpsqkseprkwslddVFVVISSGD
MQNSNNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIdsdaaasssslsssslsssNGFNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSKKEEKAVASLAvtqsnsvtqtssvtqLSGRTRGLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKllallfatifliifgglALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLATLLLIRDIQSKRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSGD
********************************************************************************WMYPSFL******************************************************************KSSLMTYYMLIINCILCVCYAIHLRDRVEKLEE**SSLRRFCSYKSIAGNNGIDVLHTDN****NFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFS*********VPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASD******DARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEV********LTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLATLLLIRDIQSKRLPY****************SWIR*******KSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAII**********WSLDDVFVVI****
*******************************************************************************DWMYP**********************************************************************SSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKN**********EVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKV*********VIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESL*****HSDSRSLATLLLIRDIQSK******************H*SWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSG*
************************KTISDDTHFPGPLFPAVRRTDKPFDLRVSIDS*******************FNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSKKE**************************RTRGLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLATLLLIRDIQSKRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSGD
***************EKPPLPKRSKTISDDTHFPGPLFPAV**T**P****************************FNERDWMYPSFLGP***************************************************************LKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPG*********SF*K**DPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLATLLLIRDIQSKRLPYR***PTS*RLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSG*
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MQNSNNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIDSDAAASSSSLSSSSLSSSNGFNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSKKEEKAVASLAVTQSNSVTQTSSVTQLSGRTRGLKSSLMTYYMLIINCILCVCYxxxxxxxxxxxxxxxxxxxxxCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIxxxxxxxxxxxxxxxxxxxxxFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLATLLLIRDIQSKRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSGD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query917 2.2.26 [Sep-21-2011]
Q6RHR6882 Ion channel DMI1 OS=Medic N/A no 0.942 0.979 0.714 0.0
Q4VY51894 Probable ion channel SYM8 N/A no 0.964 0.988 0.719 0.0
Q5H8A5917 Ion channel POLLUX OS=Lot N/A no 0.970 0.970 0.718 0.0
Q5N941965 Probable ion channel POLL yes no 0.905 0.860 0.716 0.0
Q9LTX4824 Probable ion channel POLL yes no 0.800 0.890 0.770 0.0
Q5H8A6853 Ion channel CASTOR OS=Lot N/A no 0.877 0.943 0.648 0.0
Q75LD5893 Probable ion channel CAST no no 0.829 0.852 0.661 0.0
Q8VZM7813 Putative ion channel POLL no no 0.644 0.726 0.241 1e-47
Q940Y9817 Putative ion channel POLL no no 0.637 0.716 0.248 7e-47
O27564336 Calcium-gated potassium c yes no 0.329 0.898 0.220 1e-06
>sp|Q6RHR6|DMI1_MEDTR Ion channel DMI1 OS=Medicago truncatula GN=DMI1 PE=2 SV=1 Back     alignment and function desciption
 Score = 1269 bits (3283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/928 (71%), Positives = 748/928 (80%), Gaps = 64/928 (6%)

Query: 5   NNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIDSDAAASSSS 64
           +N+E+S      KPPL K++KT+                     +LRVS+       ++ 
Sbjct: 4   SNEESSNLNVMNKPPL-KKTKTLPS------------------LNLRVSVTPPNPNDNNG 44

Query: 65  LSSSSLSSSNGFNERDWMYPSFLGPHMGRRRIK---------------VKPSKLEFKGNE 109
           +  +S + ++ F+E+ W YPSFLG  +G    K               + P       N+
Sbjct: 45  IGGTSTTKTD-FSEQQWNYPSFLG--IGSTSRKRRQPPPPPSKPPVNLIPPHPRPLSVND 101

Query: 110 EKKRIQELGSKKEEKAVASLAVTQSNSVTQTSSVTQLSGRTRGLKSSLMTYYMLIINCIL 169
             K      +       +S ++T+      TSS                 +Y+L+I CI+
Sbjct: 102 HNKT-----TSSLLPQPSSSSITKQQQQHSTSSPI---------------FYLLVICCII 141

Query: 170 CVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVAL 229
            V Y+ +L+ ++ KL++    L   C        NG   +  + + D N   AD RT+AL
Sbjct: 142 LVPYSAYLQYKLAKLKDMKLQL---CGQIDFCSRNGKTSIQEEVDDDDN---ADSRTIAL 195

Query: 230 YSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLL 289
           Y V+ TL++PFVLYKYLDYLPQI NF +RT+ NKE+VPLKKRVAY VDV FS+YPYAKLL
Sbjct: 196 YIVLFTLILPFVLYKYLDYLPQIINFLRRTESNKEDVPLKKRVAYMVDVFFSIYPYAKLL 255

Query: 290 ALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSG 349
           ALL AT+FLI FGGLALYAV+  S AEALW SWT+VAD+GNHA+  GTG RIVSVSIS+G
Sbjct: 256 ALLCATLFLIAFGGLALYAVTGGSMAEALWHSWTYVADAGNHAETEGTGQRIVSVSISAG 315

Query: 350 GMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIG 409
           GMLIFAMMLGLVSDAISEKVDSLRKGKSEVIE+NH+LILGWSDKLGSLLKQLA+ANKS+G
Sbjct: 316 GMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHVLILGWSDKLGSLLKQLAIANKSVG 375

Query: 410 GGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLAS 469
           GGVIVVLAE++KEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLA+
Sbjct: 376 GGVIVVLAEKEKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLAA 435

Query: 470 DENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIG 529
           DENADQSDARALRVVLSL GVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIG
Sbjct: 436 DENADQSDARALRVVLSLAGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIG 495

Query: 530 RLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAE 589
           RLMIQCALQPGLAQIWEDILGFENAEFYIKRWP+LDDL F++++ISFPDAIPCG+KVAA+
Sbjct: 496 RLMIQCALQPGLAQIWEDILGFENAEFYIKRWPELDDLLFKDILISFPDAIPCGVKVAAD 555

Query: 590 GGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFC 649
           GGKI++NPDDNYVL++GDEVLVIAEDDDTYAPGPLPEV  K  F +I DPPKYPEKILFC
Sbjct: 556 GGKIVINPDDNYVLRDGDEVLVIAEDDDTYAPGPLPEVR-KGYFPRIRDPPKYPEKILFC 614

Query: 650 GWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNA 709
           GWRRDIDDMIMVLEAFLAPGSELWM NEVPEKERE+KL  G LD+ GL NIKLVHREGNA
Sbjct: 615 GWRRDIDDMIMVLEAFLAPGSELWMFNEVPEKERERKLAAGELDVFGLENIKLVHREGNA 674

Query: 710 VIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLATLLLIRDIQSKRLPYRDTKPTS 769
           VIRRHLESLPLETFDSILILADES+EDS+ HSDSRSLATLLLIRDIQS+RLPYRDTK TS
Sbjct: 675 VIRRHLESLPLETFDSILILADESVEDSVAHSDSRSLATLLLIRDIQSRRLPYRDTKSTS 734

Query: 770 LRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVA 829
           LRLSGFSH+SWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVA
Sbjct: 735 LRLSGFSHNSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVA 794

Query: 830 EDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTE 889
           EDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEE+ F+DIMIRGR R+EIVIGYRLAN E
Sbjct: 795 EDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYDIMIRGRTRKEIVIGYRLANQE 854

Query: 890 RAIINPSQKSEPRKWSLDDVFVVISSGD 917
           RAIINPS+KS PRKWSLDDVFVV++SG+
Sbjct: 855 RAIINPSEKSVPRKWSLDDVFVVLASGE 882
Required for early signal transduction events leading to endosymbiosis. Acts early in a signal transduction chain leading from the perception of Nod factor to the activation of calcium spiking. Also involved in mycorrhizal symbiosis. May be involved in the regulation of the calcium channel responsible for calcium spiking by mobilizing another cation, and thereby altering the membrane potential.
Medicago truncatula (taxid: 3880)
>sp|Q4VY51|SYM8_PEA Probable ion channel SYM8 OS=Pisum sativum GN=SYM8 PE=1 SV=3 Back     alignment and function description
>sp|Q5H8A5|POLLU_LOTJA Ion channel POLLUX OS=Lotus japonicus GN=POLLUX PE=1 SV=1 Back     alignment and function description
>sp|Q5N941|POLLU_ORYSJ Probable ion channel POLLUX OS=Oryza sativa subsp. japonica GN=Os01g0870100 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTX4|POLLU_ARATH Probable ion channel POLLUX OS=Arabidopsis thaliana GN=At5g49960 PE=2 SV=1 Back     alignment and function description
>sp|Q5H8A6|CASTO_LOTJA Ion channel CASTOR OS=Lotus japonicus GN=CASTOR PE=1 SV=1 Back     alignment and function description
>sp|Q75LD5|CASTO_ORYSJ Probable ion channel CASTOR OS=Oryza sativa subsp. japonica GN=Os03g0843600 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZM7|POLL1_ARATH Putative ion channel POLLUX-like 1 OS=Arabidopsis thaliana GN=At5g02940 PE=2 SV=1 Back     alignment and function description
>sp|Q940Y9|POLL2_ARATH Putative ion channel POLLUX-like 2 OS=Arabidopsis thaliana GN=At5g43745 PE=2 SV=1 Back     alignment and function description
>sp|O27564|MTHK_METTH Calcium-gated potassium channel MthK OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=mthK PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query917
255571020889 conserved hypothetical protein [Ricinus 0.912 0.941 0.819 0.0
449503321942 PREDICTED: ion channel DMI1-like [Cucumi 0.971 0.945 0.739 0.0
449435486915 PREDICTED: ion channel DMI1-like [Cucumi 0.969 0.971 0.738 0.0
225448136818 PREDICTED: ion channel DMI1 [Vitis vinif 0.854 0.958 0.830 0.0
224119998693 predicted protein [Populus trichocarpa] 0.755 1.0 0.925 0.0
224129674711 predicted protein [Populus trichocarpa] 0.775 1.0 0.894 0.0
357445307882 DMI1 protein [Medicago truncatula] gi|62 0.942 0.979 0.714 0.0
161105393894 SYM8 [Pisum sativum] 0.964 0.988 0.721 0.0
133740540894 DMI1 protein homologue [Pisum sativum] 0.964 0.988 0.721 0.0
356541860864 PREDICTED: ion channel DMI1 [Glycine max 0.942 1.0 0.732 0.0
>gi|255571020|ref|XP_002526461.1| conserved hypothetical protein [Ricinus communis] gi|223534241|gb|EEF35956.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score = 1389 bits (3595), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/849 (81%), Positives = 751/849 (88%), Gaps = 12/849 (1%)

Query: 77  NERDWMYPSFLGPHM---GRRRIKVKPSK----LEFKGNEEKKRIQELGSKKEEKAVASL 129
           + RDW+YPSFLGPH+   G  R+ VK  +     E KG   +  ++E   +K+EK  + +
Sbjct: 45  DSRDWVYPSFLGPHVVAAGANRVTVKGRRGKVVEERKGTVSRDSVKE---EKKEKVASQV 101

Query: 130 AVTQSNSVTQTSSVTQLSGRT-RGLKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEEN 188
            VTQS S+TQ+++   +  RT RGL      +Y LI  CIL V  +IHLR +V KLEEEN
Sbjct: 102 LVTQSGSLTQSTATGVIRSRTSRGLFKHSFVFYFLIFTCILSVSCSIHLRIKVRKLEEEN 161

Query: 189 SSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPFVLYKYLDY 248
            +LR  CS +S  GNN I+VL  +++S  NF N D R VALYSVI TL+MPF+ YKYLDY
Sbjct: 162 INLRTACSNQSGVGNNSIEVLQLEDDSSFNFQNGDSRAVALYSVIFTLIMPFLFYKYLDY 221

Query: 249 LPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLIIFGGLALYA 308
           LP+IK  SKRT+ NKEEVPLKKR+AY VDV FSVYPYAKLLALLFATIFLI FGGLALYA
Sbjct: 222 LPEIKTLSKRTRNNKEEVPLKKRIAYMVDVFFSVYPYAKLLALLFATIFLIGFGGLALYA 281

Query: 309 VSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEK 368
           VSD SFAEALWLSWTFVADSGNHADR+GTGPRIVSVSISSGGMLIFAMMLGLVSDAISEK
Sbjct: 282 VSDGSFAEALWLSWTFVADSGNHADRIGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEK 341

Query: 369 VDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDI 428
           VDSLRKGKSEVIEK HILILGWSDKLGSLLKQLA+ANKSIGGGV+VVLAERDKEEMEMDI
Sbjct: 342 VDSLRKGKSEVIEKKHILILGWSDKLGSLLKQLAIANKSIGGGVVVVLAERDKEEMEMDI 401

Query: 429 AKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLT 488
           AKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDA ALRVVLSLT
Sbjct: 402 AKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDAHALRVVLSLT 461

Query: 489 GVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDI 548
           GVKEGL+GHVVVEMSD+DNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDI
Sbjct: 462 GVKEGLKGHVVVEMSDVDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDI 521

Query: 549 LGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDE 608
           LGFENAEFYIKRWPQLD LRFE+V+ISFPDAIPCG+K+AAEGGKI LNPDD+YVLKEGDE
Sbjct: 522 LGFENAEFYIKRWPQLDGLRFEDVLISFPDAIPCGVKLAAEGGKINLNPDDSYVLKEGDE 581

Query: 609 VLVIAEDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAP 668
           +LVIAEDDDTYAPGPLP+V  + S  K+ DPPKYPEKILFCGWRRDIDDMIMVLE  LAP
Sbjct: 582 ILVIAEDDDTYAPGPLPKVR-RGSCPKLIDPPKYPEKILFCGWRRDIDDMIMVLEECLAP 640

Query: 669 GSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILI 728
           GSELWM NEVPEKEREKKLTDGGLD SGL NIKLVHREGNAVIRRHL+SLPLETFDSILI
Sbjct: 641 GSELWMFNEVPEKEREKKLTDGGLDTSGLENIKLVHREGNAVIRRHLDSLPLETFDSILI 700

Query: 729 LADESLEDSIVHSDSRSLATLLLIRDIQSKRLPYRDTKPTSLRLSGFSHSSWIREMQQAS 788
           LADESLEDS+VHSDSRSLATLLLIRDIQSKRLPYRDTK   LRLSGFSHSSWIREMQQAS
Sbjct: 701 LADESLEDSVVHSDSRSLATLLLIRDIQSKRLPYRDTKSMPLRLSGFSHSSWIREMQQAS 760

Query: 789 DKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNE 848
           DKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELF +EGNE
Sbjct: 761 DKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFTKEGNE 820

Query: 849 MCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDD 908
           MCIKPAEFYLFDQEE+ F++IMIRGRQR EIVIGYRLA  ERAIINP +KS+ +KWSLDD
Sbjct: 821 MCIKPAEFYLFDQEELCFYEIMIRGRQRNEIVIGYRLATAERAIINPPEKSKLKKWSLDD 880

Query: 909 VFVVISSGD 917
           VFVVIS G+
Sbjct: 881 VFVVISLGE 889

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449503321|ref|XP_004161944.1| PREDICTED: ion channel DMI1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449435486|ref|XP_004135526.1| PREDICTED: ion channel DMI1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225448136|ref|XP_002263318.1| PREDICTED: ion channel DMI1 [Vitis vinifera] gi|297739532|emb|CBI29714.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224119998|ref|XP_002331112.1| predicted protein [Populus trichocarpa] gi|222872840|gb|EEF09971.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224129674|ref|XP_002328774.1| predicted protein [Populus trichocarpa] gi|222839072|gb|EEE77423.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357445307|ref|XP_003592931.1| DMI1 protein [Medicago truncatula] gi|62286545|sp|Q6RHR6.1|DMI1_MEDTR RecName: Full=Ion channel DMI1; AltName: Full=Does not make infections protein 1 gi|44953222|gb|AAS49490.1| DMI1 protein [Medicago truncatula] gi|92870250|gb|ABE79577.1| Ion channel DMI-1 , putative [Medicago truncatula] gi|355481979|gb|AES63182.1| DMI1 protein [Medicago truncatula] gi|357394659|gb|AET75788.1| DMI1 [Cloning vector pHUGE-MtNFS] gi|357394672|gb|AET75800.1| DMI1 [Cloning vector pHUGE-LjMtNFS] Back     alignment and taxonomy information
>gi|161105393|gb|ABX57723.1| SYM8 [Pisum sativum] Back     alignment and taxonomy information
>gi|133740540|emb|CAJ00334.2| DMI1 protein homologue [Pisum sativum] Back     alignment and taxonomy information
>gi|356541860|ref|XP_003539390.1| PREDICTED: ion channel DMI1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query917
UNIPROTKB|Q4VY51894 SYM8 "Probable ion channel SYM 0.946 0.970 0.710 0.0
TAIR|locus:2158799824 AT5G49960 [Arabidopsis thalian 0.806 0.898 0.752 1.3e-297
TAIR|locus:2151276813 AT5G02940 [Arabidopsis thalian 0.635 0.717 0.248 1.4e-42
TAIR|locus:505006671817 AT5G43745 [Arabidopsis thalian 0.324 0.364 0.253 1.9e-41
UNIPROTKB|O27564336 mthK "Calcium-gated potassium 0.175 0.479 0.237 1.5e-09
UNIPROTKB|Q4VY51 SYM8 "Probable ion channel SYM8" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
 Score = 3086 (1091.4 bits), Expect = 0., Sum P(2) = 0.
 Identities = 632/889 (71%), Positives = 708/889 (79%)

Query:    39 PAVRRT----DKP-FDLRVSIXXXXXXXXXXXXXXXXXXXNGFNERDWMYPSFLG-PHMG 92
             P ++RT     +P  +LRVSI                     F ++   YPSFLG     
Sbjct:    17 PPLKRTKTLAQQPSLNLRVSIAAADNGIGNSSSSSTKTD---FEQQQRNYPSFLGIGSTS 73

Query:    93 RRRIKVKPSKLEFKGNEEKKRIQELGSKKEEKAVASLAXXXXXXXXXXXXXXXLSGRTRG 152
             R+R    P K        K    +  +K   +   S +                  +   
Sbjct:    74 RKRRPPPPPKPSNITPNVKPPASDFQTKPHSEPKTSPSSSSPPSLPIAITKQ--QQQQHS 131

Query:   153 LKSSLMTYYMLIINCILCVCYAIHLRDRVEKLEEENSSLRRFCSYKSIAGNNGIDVLHTD 212
             + S +  +Y+ +I C++ V Y+  L+ ++ KL++    L   C        NG   L  D
Sbjct:   132 ISSPI--FYLFVITCVIFVPYSAFLQYKLAKLKDMKLQL---CCQIDFCSGNGKTSLQKD 186

Query:   213 NNSDSNFG----NADGRTVALYSVIVTLLMPFVLYKYLDYLPQIKNFSKRTKKNKEEVPL 268
                D +F     NAD RT++LY V+ TL++PF+LYKY+DYLPQ+ NFS+RT  NKE+VPL
Sbjct:   187 VVDDGSFSYYILNADSRTISLYIVLFTLVLPFILYKYIDYLPQMINFSRRTNSNKEDVPL 246

Query:   269 KKRVAYSVDVCFSVYPYAKXXXXXXXXXXXXXXXXXALYAVSDSSFAEALWLSWTFVADS 328
             KKRVAY VDV FS+YPYAK                 ALYAV+  S AEALW SWT+VAD+
Sbjct:   247 KKRVAYMVDVFFSIYPYAKLLALLFATLFLIAFGGLALYAVTGGSMAEALWHSWTYVADA 306

Query:   329 GNHADRVGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILIL 388
             GNHA+  G G RIVSVSIS+GGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIE+NH+LIL
Sbjct:   307 GNHAETEGMGQRIVSVSISAGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHVLIL 366

Query:   389 GWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPL 448
             GWSDKLGSLLKQLA+ANKS+GGGVIVVLAE++KEEMEMDIAKLEFDFMGTSVICRSGSPL
Sbjct:   367 GWSDKLGSLLKQLAIANKSVGGGVIVVLAEKEKEEMEMDIAKLEFDFMGTSVICRSGSPL 426

Query:   449 ILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNE 508
             ILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKE LRGHVVVEMSDLDNE
Sbjct:   427 ILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEALRGHVVVEMSDLDNE 486

Query:   509 PLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLR 568
             PLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWP+LD L 
Sbjct:   487 PLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPELDGLL 546

Query:   569 FEEVVISFPDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDDTYAPGPLPEVV 628
             F++++ISFPDAIPCG+KV+A+GGKI++NPDDNYVL++GDEVLVIAEDDDTYAPGPLPEV 
Sbjct:   547 FKDILISFPDAIPCGVKVSADGGKIVINPDDNYVLRDGDEVLVIAEDDDTYAPGPLPEVR 606

Query:   629 CKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLT 688
              K  F +I DPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWM NEVPEK+RE+KL 
Sbjct:   607 -KGYFPRIRDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMFNEVPEKQRERKLA 665

Query:   689 DGGLDISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLAT 748
              G LD+ GL NIKLVHREGNAVIRRHLESLPLETFDSILILADES+EDS+ HSDSRSLAT
Sbjct:   666 AGELDVFGLENIKLVHREGNAVIRRHLESLPLETFDSILILADESVEDSVAHSDSRSLAT 725

Query:   749 LLLIRDIQSKRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSV 808
             LLLIRDIQS+RLPYRDTK TSLRLSGFSH+SWIREMQQASDKSIIISEILDSRTRNLVSV
Sbjct:   726 LLLIRDIQSRRLPYRDTKSTSLRLSGFSHNSWIREMQQASDKSIIISEILDSRTRNLVSV 785

Query:   809 SRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFD 868
             SRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEE+ F+D
Sbjct:   786 SRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYD 845

Query:   869 IMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSGD 917
             IMIRGR R+EIVIGYRLA+ ERA+INPS+KS  RKWSLDDVFVVI+SG+
Sbjct:   846 IMIRGRTRKEIVIGYRLASQERALINPSEKSMTRKWSLDDVFVVIASGE 894
GO:0034220 "ion transmembrane transport" evidence=NAS
GO:0042802 "identical protein binding" evidence=NAS
GO:0044005 "induction by symbiont in host of tumor, nodule, or growth" evidence=IMP
TAIR|locus:2158799 AT5G49960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151276 AT5G02940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006671 AT5G43745 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O27564 mthK "Calcium-gated potassium channel MthK" [Methanothermobacter thermautotrophicus str. Delta H (taxid:187420)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LTX4POLLU_ARATHNo assigned EC number0.77040.80040.8907yesno
Q5N941POLLU_ORYSJNo assigned EC number0.71640.90510.8601yesno
Q4VY51SYM8_PEANo assigned EC number0.71950.96400.9888N/Ano
Q5H8A6CASTO_LOTJANo assigned EC number0.64860.87780.9437N/Ano
Q5H8A5POLLU_LOTJANo assigned EC number0.71810.97050.9705N/Ano
Q6RHR6DMI1_MEDTRNo assigned EC number0.71440.94220.9795N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query917
pfam06241208 pfam06241, DUF1012, Protein of unknown function (D 1e-12
>gnl|CDD|114933 pfam06241, DUF1012, Protein of unknown function (DUF1012) Back     alignment and domain information 
 Score = 67.4 bits (164), Expect = 1e-12
 Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 5/153 (3%)

Query: 461 ARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIE 520
           ARAII+L +  +  + D  A   VL+L  +++      +VE+S  +   L+K + G  +E
Sbjct: 1   ARAIIILPTKGDRYEVDTDAFLSVLALEPIQKMESIPTIVEVSSPNMYDLLKSISGLKVE 60

Query: 521 TVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAI 580
            V   +   +L +QC+ Q  L +I+  +L +    F +  +P L  +++ ++ + F + +
Sbjct: 61  PV--ENSTSKLFVQCSRQKDLIKIYRHLLNYSKNVFNLCSFPNLTGMKYRQLRLGFQEVV 118

Query: 581 PCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIA 613
            CGI      GK+  +P+D+  L E D++L IA
Sbjct: 119 VCGI---LRDGKVNFHPNDDEELMETDKLLFIA 148

Family of uncharacterized proteins found in both eukaryotes and bacteria. Length = 208

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 917
PRK09496453 trkA potassium transporter peripheral membrane com 100.0
KOG14201103 consensus Ca2+-activated K+ channel Slowpoke, alph 100.0
PRK10537393 voltage-gated potassium channel; Provisional 99.97
PF06241206 DUF1012: Protein of unknown function (DUF1012); In 99.93
KOG3193 1087 consensus K+ channel subunit [Inorganic ion transp 99.91
COG0569225 TrkA K+ transport systems, NAD-binding component [ 99.88
PRK09496453 trkA potassium transporter peripheral membrane com 99.84
PRK10669558 putative cation:proton antiport protein; Provision 99.69
PRK03659601 glutathione-regulated potassium-efflux system prot 99.61
COG0569225 TrkA K+ transport systems, NAD-binding component [ 99.59
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 99.58
PRK03562621 glutathione-regulated potassium-efflux system prot 99.57
PRK10537393 voltage-gated potassium channel; Provisional 99.45
PF06241206 DUF1012: Protein of unknown function (DUF1012); In 99.43
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 99.33
PRK10669558 putative cation:proton antiport protein; Provision 99.21
PRK03659601 glutathione-regulated potassium-efflux system prot 99.11
PRK03562621 glutathione-regulated potassium-efflux system prot 99.03
PF0788579 Ion_trans_2: Ion channel; InterPro: IPR013099 This 99.02
COG1226212 Kch Kef-type K+ transport systems, predicted NAD-b 98.74
KOG3713477 consensus Voltage-gated K+ channel KCNB/KCNC [Inor 98.72
KOG1545507 consensus Voltage-gated shaker-like K+ channel KCN 98.69
KOG1419654 consensus Voltage-gated K+ channel KCNQ [Inorganic 98.46
PLN03192823 Voltage-dependent potassium channel; Provisional 98.33
KOG4404350 consensus Tandem pore domain K+ channel TASK3/THIK 98.21
COG0490162 Putative regulatory, ligand-binding protein relate 98.21
KOG1420 1103 consensus Ca2+-activated K+ channel Slowpoke, alph 98.15
COG3400471 Uncharacterized protein conserved in bacteria [Fun 98.09
COG1226212 Kch Kef-type K+ transport systems, predicted NAD-b 98.06
KOG3193 1087 consensus K+ channel subunit [Inorganic ion transp 97.85
PF0208071 TrkA_C: TrkA-C domain; InterPro: IPR006037 The reg 97.84
KOG4390632 consensus Voltage-gated A-type K+ channel KCND [In 97.76
PF01007336 IRK: Inward rectifier potassium channel; InterPro: 97.55
PF03493101 BK_channel_a: Calcium-activated BK potassium chann 97.29
KOG1418433 consensus Tandem pore domain K+ channel [Inorganic 97.14
KOG3684489 consensus Ca2+-activated K+ channel proteins (inte 97.11
KOG0498727 consensus K+-channel ERG and related proteins, con 97.06
KOG1418433 consensus Tandem pore domain K+ channel [Inorganic 96.95
KOG4404350 consensus Tandem pore domain K+ channel TASK3/THIK 96.88
COG3273204 Uncharacterized conserved protein [Function unknow 96.8
KOG0501971 consensus K+-channel KCNQ [Inorganic ion transport 96.19
PRK06719157 precorrin-2 dehydrogenase; Validated 96.1
PRK06719157 precorrin-2 dehydrogenase; Validated 96.01
COG0490162 Putative regulatory, ligand-binding protein relate 95.94
KOG0499815 consensus Cyclic nucleotide-gated cation channel C 95.69
KOG0500536 consensus Cyclic nucleotide-gated cation channel C 94.57
PRK06718202 precorrin-2 dehydrogenase; Reviewed 93.66
COG3400 471 Uncharacterized protein conserved in bacteria [Fun 93.53
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 93.45
PRK05326562 potassium/proton antiporter; Reviewed 93.13
PRK04972558 putative transporter; Provisional 92.68
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 92.28
PRK06718202 precorrin-2 dehydrogenase; Reviewed 92.25
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 92.2
PRK03818552 putative transporter; Validated 92.1
PF0208071 TrkA_C: TrkA-C domain; InterPro: IPR006037 The reg 91.75
COG1748389 LYS9 Saccharopine dehydrogenase and related protei 91.49
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 91.32
PF00520200 Ion_trans: Ion transport protein calcium channel s 90.74
KOG3827400 consensus Inward rectifier K+ channel [Inorganic i 90.69
PF03435386 Saccharop_dh: Saccharopine dehydrogenase ; InterPr 90.41
PRK03818552 putative transporter; Validated 89.74
COG3273204 Uncharacterized conserved protein [Function unknow 89.3
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 87.78
PRK05562223 precorrin-2 dehydrogenase; Provisional 86.9
PF13460183 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X 86.72
PRK04972558 putative transporter; Provisional 86.36
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 85.31
PF05368233 NmrA: NmrA-like family; InterPro: IPR008030 NmrA i 85.21
PF00670162 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase 84.84
PF03493101 BK_channel_a: Calcium-activated BK potassium chann 84.54
PLN028191042 lysine-ketoglutarate reductase/saccharopine dehydr 84.07
PF13460183 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X 83.74
CHL00194317 ycf39 Ycf39; Provisional 82.13
PRK05562223 precorrin-2 dehydrogenase; Provisional 81.54
COG1648210 CysG Siroheme synthase (precorrin-2 oxidase/ferroc 80.87
TIGR00933390 2a38 potassium uptake protein, TrkH family. The pr 80.84
cd01075200 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l 80.77
COG0168499 TrkG Trk-type K+ transport systems, membrane compo 80.4
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=4.6e-36  Score=349.34  Aligned_cols=427  Identities=16%  Similarity=0.156  Sum_probs=330.8

Q ss_pred             CeEEEEeccchHHHHHHHHHHhcccCCCCceEEEEcCChHHHHHHHHhhccccCCccEEEEEECCCCHHHHhccCccccc
Q 002475          383 NHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKAR  462 (917)
Q Consensus       383 ~HIII~G~g~~~~~li~eL~~~~~~~~~~~~VVLid~d~e~~e~~l~~~~~~~~~~~V~~i~Gd~~d~e~L~rAgI~~A~  462 (917)
                      +||+|||+|..+..+++.|...      ++.|+++|.+++..+...+       ..++.++.||+++.+.|+++++++|+
T Consensus         1 m~viIiG~G~ig~~~a~~L~~~------g~~v~vid~~~~~~~~~~~-------~~~~~~~~gd~~~~~~l~~~~~~~a~   67 (453)
T PRK09496          1 MKIIIVGAGQVGYTLAENLSGE------NNDVTVIDTDEERLRRLQD-------RLDVRTVVGNGSSPDVLREAGAEDAD   67 (453)
T ss_pred             CEEEEECCCHHHHHHHHHHHhC------CCcEEEEECCHHHHHHHHh-------hcCEEEEEeCCCCHHHHHHcCCCcCC
Confidence            4899999999999999999753      5788999999887776432       13578899999999999999999999


Q ss_pred             EEEEecCCCCCCcchHHHHHHHHHHhhhcCCCCceEEEEecCCCC---HHHH--HHcCCCeEEEeccHHHHHHHHHHHHc
Q 002475          463 AIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDN---EPLV--KLVGGELIETVVAHDVIGRLMIQCAL  537 (917)
Q Consensus       463 aVIilt~d~~~~~sD~~Ni~~~Laar~l~p~~~~~IIA~v~d~e~---~~~l--~~~Gad~VevV~~~el~a~lLa~~~~  537 (917)
                      .+|+++++      |..|+.+++.+|.++|  ..++|+++.+.++   ...+  +.+|++.  +|.|+.+.+..|++.+.
T Consensus        68 ~vi~~~~~------~~~n~~~~~~~r~~~~--~~~ii~~~~~~~~~~~~~l~~~~~~G~~~--vi~p~~~~a~~l~~~l~  137 (453)
T PRK09496         68 LLIAVTDS------DETNMVACQIAKSLFG--APTTIARVRNPEYAEYDKLFSKEALGIDL--LISPELLVAREIARLIE  137 (453)
T ss_pred             EEEEecCC------hHHHHHHHHHHHHhcC--CCeEEEEECCccccchhhhhhhhcCCccE--EECHHHHHHHHHHHHhc
Confidence            99999966      8899999999999977  4579999988776   3333  6689997  58999999999999999


Q ss_pred             CCcHHHHHHHHhcC--CCceEEEecCCccCCCcHHhHhhh-C-CCeEEEEEEEeecCCeEEeCCCCCceecCCCEEEEEE
Q 002475          538 QPGLAQIWEDILGF--ENAEFYIKRWPQLDDLRFEEVVIS-F-PDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIA  613 (917)
Q Consensus       538 ~Pg~~~vl~~Ll~~--~g~ei~v~~~p~l~G~tf~el~~~-~-~~~ivIGI~r~~~~g~v~lnP~~d~vI~~GD~LiVIa  613 (917)
                      .|+...++. +.+.  .-.++.+.+.+++.|+++.|+..+ . .++.++++.|   +|+ .+.|.++++|++||+|+++|
T Consensus       138 ~~~~~~~~~-~~~~~~~i~e~~V~~~s~~~g~~l~~l~~~~~~~~~~vi~i~r---~~~-~~~p~~~~~l~~gD~l~v~g  212 (453)
T PRK09496        138 YPGALDVEE-FADGRVQLVEVKVYEGSPLVGKPLSDLREHFPDIDVRVVAIFR---GGR-LIIPRGDTVIEAGDEVYFIG  212 (453)
T ss_pred             CCCceEeee-ecCCeEEEEEEEeCCCCccCCcCHHHhhhhcCCCceEEEEEEE---CCE-EEcCCCCcEecCCCEEEEEe
Confidence            999876643 1111  112444555678999999999865 3 5899999987   455 46899999999999999999


Q ss_pred             eCCCccCCCCCccchhccccccCCCCCCCCCeEEEEccccCHHHHHHHHHHhcCCCCeEEEEccCChHHHHHHhhcCCCC
Q 002475          614 EDDDTYAPGPLPEVVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMLNEVPEKEREKKLTDGGLD  693 (917)
Q Consensus       614 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~hilI~Gwg~~~~~li~~L~~~~~~g~~i~II~~~p~~Er~~~l~~~gl~  693 (917)
                      +.++..++...   .        .......+|++|||||+.|..+++.|.+.   |.++++++.++  ++.+.+.+.   
T Consensus       213 ~~~~l~~~~~~---~--------~~~~~~~~~iiIiG~G~~g~~l~~~L~~~---~~~v~vid~~~--~~~~~~~~~---  273 (453)
T PRK09496        213 AREHIRAVMSE---F--------GRLEKPVKRVMIVGGGNIGYYLAKLLEKE---GYSVKLIERDP--ERAEELAEE---  273 (453)
T ss_pred             CHHHHHHHHHH---h--------CccCCCCCEEEEECCCHHHHHHHHHHHhC---CCeEEEEECCH--HHHHHHHHH---
Confidence            99876554321   1        11224579999999999999999999864   78899999754  566666542   


Q ss_pred             ccCcCCceEEEEEcCcCCHhHHhcCCCCCccEEEEecCCCCcCccccCcHHHHHHHHHHHHhcccCCCCCCCCCcccccc
Q 002475          694 ISGLMNIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSIVHSDSRSLATLLLIRDIQSKRLPYRDTKPTSLRLS  773 (917)
Q Consensus       694 ~~~l~~~~v~~i~GD~t~~~~L~~a~Ie~adavIilsd~~~~~~~~~~Da~~l~t~L~~r~l~~~~~~~~~~~~~~~~~~  773 (917)
                         +.+  +.++.||+++++.|+++++++||++|++++         +|..|+.+.+++|.++.+               
T Consensus       274 ---~~~--~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~---------~~~~n~~~~~~~~~~~~~---------------  324 (453)
T PRK09496        274 ---LPN--TLVLHGDGTDQELLEEEGIDEADAFIALTN---------DDEANILSSLLAKRLGAK---------------  324 (453)
T ss_pred             ---CCC--CeEEECCCCCHHHHHhcCCccCCEEEECCC---------CcHHHHHHHHHHHHhCCC---------------
Confidence               223  456899999999999999999999999875         367899999999988643               


Q ss_pred             CCCcchhHHHhhhcCCcceEEEEEecccccchhhccCCCcEEecHHHHHHHHHHHHhhhhHHHHHHHHHcc--cCceEEE
Q 002475          774 GFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAE--EGNEMCI  851 (917)
Q Consensus       774 ~~s~~~~i~kl~ra~~~~~Iv~Ei~d~~~~~ll~~~~~~d~V~S~~lv~~~LA~~a~~p~i~~vl~eLl~~--eG~el~i  851 (917)
                                        +++++..++++...++..|++.++.+..+.+..+++....|++..++. +.+.  +..++.+
T Consensus       325 ------------------~ii~~~~~~~~~~~~~~~g~~~vi~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v  385 (453)
T PRK09496        325 ------------------KVIALVNRPAYVDLVEGLGIDIAISPRQATASEILRHVRRGDIVAVHS-LRRGAAEAIEAVA  385 (453)
T ss_pred             ------------------eEEEEECCcchHHHHHhcCCCEEECHHHHHHHHHHHHhhccchhhhhh-hcCCcEEEEEEEe
Confidence                              688999999999999988866555566777899999999999877664 2211  1122332


Q ss_pred             EcCcccccCCCCccHHHHHHHhccCCcEEEEEEeCCCCcEEECCCCCCCCCeecCCCEEEEEecCC
Q 002475          852 KPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSGD  917 (917)
Q Consensus       852 ~~~~~~~~~~~~ltf~~l~~~~r~~g~ivIG~~~~~g~~~iiNP~~k~~~~~l~~gD~LIVi~~~~  917 (917)
                      .+-+.    -.+.++.++.   ...|..++|+.+.+  +. ++|++   ++++++||+|++++..+
T Consensus       386 ~~~s~----~~g~~l~el~---l~~~~~i~~i~r~~--~~-~~p~~---~~~l~~gD~l~v~~~~~  438 (453)
T PRK09496        386 HETSK----VVGKPLKDLK---LPKGVLIGAIVRGG--EV-IIPTG---DTVIEPGDHVIVFVLDK  438 (453)
T ss_pred             CCCCh----hccCCHHHcC---CCCCCEEEEEEECC--EE-EcCCC---CcEECCCCEEEEEEcCc
Confidence            22222    2356667762   24599999998854  44 77876   89999999999999753

>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PRK10537 voltage-gated potassium channel; Provisional Back     alignment and domain information
>PF06241 DUF1012: Protein of unknown function (DUF1012); InterPro: IPR010420 This entry represents the CASTOR/POLLUX/SYM8 family of ion channels, which are found in plants Back     alignment and domain information
>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK10537 voltage-gated potassium channel; Provisional Back     alignment and domain information
>PF06241 DUF1012: Protein of unknown function (DUF1012); InterPro: IPR010420 This entry represents the CASTOR/POLLUX/SYM8 family of ion channels, which are found in plants Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria [] Back     alignment and domain information
>COG1226 Kch Kef-type K+ transport systems, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>COG3400 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG1226 Kch Kef-type K+ transport systems, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02080 TrkA_C: TrkA-C domain; InterPro: IPR006037 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01007 IRK: Inward rectifier potassium channel; InterPro: IPR013521 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>PF03493 BK_channel_a: Calcium-activated BK potassium channel alpha subunit; InterPro: IPR003929 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3273 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PRK06718 precorrin-2 dehydrogenase; Reviewed Back     alignment and domain information
>COG3400 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PRK06718 precorrin-2 dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>PF02080 TrkA_C: TrkA-C domain; InterPro: IPR006037 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins Back     alignment and domain information
>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>COG3273 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>PRK05562 precorrin-2 dehydrogenase; Provisional Back     alignment and domain information
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA Back     alignment and domain information
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 Back     alignment and domain information
>PF03493 BK_channel_a: Calcium-activated BK potassium channel alpha subunit; InterPro: IPR003929 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase Back     alignment and domain information
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B Back     alignment and domain information
>CHL00194 ycf39 Ycf39; Provisional Back     alignment and domain information
>PRK05562 precorrin-2 dehydrogenase; Provisional Back     alignment and domain information
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] Back     alignment and domain information
>TIGR00933 2a38 potassium uptake protein, TrkH family Back     alignment and domain information
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>COG0168 TrkG Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query917
3rbz_A340 Mthk Channel, Ca2+-Bound Length = 340 1e-05
3rbx_A234 Mthk Rck Domain D184n Mutant, Ca2+-Bound Length = 2 1e-05
4ei2_A242 Crystal Structures Of Mthk Rck Gating Ring Bound To 2e-05
2aef_A234 Crystal Structures Of The Mthk Rck Domain In Ca2+ B 2e-05
2fy8_A230 Crystal Structure Of Mthk Rck Domain In Its Ligand- 2e-05
1lnq_A336 Crystal Structure Of Mthk At 3.3 A Length = 336 2e-05
2ogu_A233 Crystal Structure Of The Isolated Mthk Rck Domain L 2e-05
3kxd_A224 Crystal Structure Of The Mthk Rck In Complex With C 4e-05
>pdb|3RBZ|A Chain A, Mthk Channel, Ca2+-Bound Length = 340 Back     alignment and structure 
Iteration: 1

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 139/322 (43%), Gaps = 37/322 (11%)
Query: 306 LYAVSDSSFAEA----LWLSWTFVA-DSGNHADRVGTGP--RIVSVSISSGGMLIFAMML 358
           +Y  +   F E     + L WTFV   +  + D   + P     +V++   G+  FA+ +
Sbjct: 32  IYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIATFAVAV 91
Query: 359 GLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAE 418
             +   +  +      G  +V +  H++I GWS+     L++L        G  + VLAE
Sbjct: 92  ARLLTFLINREQMKLIGLIDVAKSRHVVICGWSESTLECLRELR-------GSEVFVLAE 144
Query: 419 RDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDA 478
              E +   + +   +F+        G P  ++DL+K +V  ARA+IV        +SD+
Sbjct: 145 --DENVRKKVLRSGANFV-------HGDPTRVSDLEKANVRGARAVIV------DLESDS 189
Query: 479 RALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQ 538
             +  +L +  + E +R  ++ E    +N   +++ G +  + +    + GRLM +    
Sbjct: 190 ETIHCILGIRKIDESVR--IIAEAERYENIEQLRMAGAD--QVISPFVISGRLMSRSIDD 245
Query: 539 PGLAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVI---SFPDAIPCGIKVAAEGGKIIL 595
              A   +D+L  E+    ++  P  +  + E V +      D     I     G ++I+
Sbjct: 246 GYEAMFVQDVLAEESTRRMVE-VPIPEGSKLEGVSVLDADIHDVTGVIIIGVGRGDELII 304
Query: 596 NPDDNYVLKEGDEVLVIAEDDD 617
           +P  +Y  + GD +L I + ++
Sbjct: 305 DPPRDYSFRAGDIILGIGKPEE 326
>pdb|3RBX|A Chain A, Mthk Rck Domain D184n Mutant, Ca2+-Bound Length = 234 Back     alignment and structure
>pdb|4EI2|A Chain A, Crystal Structures Of Mthk Rck Gating Ring Bound To Barium Length = 242 Back     alignment and structure
>pdb|2AEF|A Chain A, Crystal Structures Of The Mthk Rck Domain In Ca2+ Bound Form Length = 234 Back     alignment and structure
>pdb|2FY8|A Chain A, Crystal Structure Of Mthk Rck Domain In Its Ligand-Free Gating-Ring Form Length = 230 Back     alignment and structure
>pdb|1LNQ|A Chain A, Crystal Structure Of Mthk At 3.3 A Length = 336 Back     alignment and structure
>pdb|2OGU|A Chain A, Crystal Structure Of The Isolated Mthk Rck Domain Length = 233 Back     alignment and structure
>pdb|3KXD|A Chain A, Crystal Structure Of The Mthk Rck In Complex With Cadmium Length = 224 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query917
1lnq_A336 MTHK channels, potassium channel related protein; 5e-47
3naf_A 798 Calcium-activated potassium channel subunit alpha; 8e-45
3mt5_A 726 Potassium large conductance calcium-activated CHA 5e-38
3mt5_A726 Potassium large conductance calcium-activated CHA 6e-04
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 2e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1id1_A153 Putative potassium channel protein; RCK domain, E. 2e-07
3ldc_A82 Calcium-gated potassium channel MTHK; transmembran 4e-05
2ih3_C122 Voltage-gated potassium channel; ION channel D-ami 5e-04
2k1e_A103 Water soluble analogue of potassium channel, KCSA; 7e-04
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A Length = 336 Back     alignment and structure
 Score =  170 bits (432), Expect = 5e-47
 Identities = 68/341 (19%), Positives = 145/341 (42%), Gaps = 41/341 (12%)

Query: 286 AKLLALLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADS----GNHADRVGTGPRI 341
                +L   + +II+G    + +   S+  +L+  WTFV  +    G+++     G   
Sbjct: 18  VPATRILLLVLAVIIYGTAGFHFIEGESWTVSLY--WTFVTIATVGYGDYSPSTPLG-MY 74

Query: 342 VSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQL 401
            +V++   G+  FA+ +  + + +  +      G  +V +  H++I GWS+     L++L
Sbjct: 75  FTVTLIVLGIGTFAVAVERLLEFLINREQMKLMGLIDVAKSRHVVICGWSESTLECLREL 134

Query: 402 AVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKA 461
                  G  V V+  + +  +        +    G + +   G P  ++DL+K +V  A
Sbjct: 135 R------GSEVFVLAEDENVRK--------KVLRSGANFV--HGDPTRVSDLEKANVRGA 178

Query: 462 RAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIET 521
           RA+IV          D+  +  +L +  + E +   ++ E    +N   +++ G +  + 
Sbjct: 179 RAVIVDLES------DSETIHCILGIRKIDESV--RIIAEAERYENIEQLRMAGAD--QV 228

Query: 522 VVAHDVIGRLMIQCALQPGLAQIWEDILGFEN----AEFYIKRWPQLDDLRFEEVVI-SF 576
           +    + GRLM +       A   +D+L  E+     E  I    +L+ +   +  I   
Sbjct: 229 ISPFVISGRLMSRSIDDGYEAMFVQDVLAEESTRRMVEVPIPEGSKLEGVSVLDADIHDV 288

Query: 577 PDAIPCGIKVAAEGGKIILNPDDNYVLKEGDEVLVIAEDDD 617
              I  G+     G ++I++P  +Y  + GD +L I + ++
Sbjct: 289 TGVIIIGVG---RGDELIIDPPRDYSFRAGDIILGIGKPEE 326
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens} Length = 798 Back     alignment and structure
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A Length = 726 Back     alignment and structure
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A Length = 726 Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Length = 234 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Length = 153 Back     alignment and structure
>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 3r65_A 3ous_A 3ldd_A Length = 82 Back     alignment and structure
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ... Length = 122 Back     alignment and structure
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A Length = 103 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 917
d1lnqa280 f.14.1.1 (A:19-98) Potassium channel-related prote 1e-06
d1r3jc_103 f.14.1.1 (C:) Potassium channel protein {Streptomy 1e-05
d1p7ba2116 f.14.1.1 (A:36-151) Inward rectifier potassium cha 1e-04
d1xl4a2116 f.14.1.1 (A:23-138) Inward rectifier potassium cha 1e-04
>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Length = 80 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 13/77 (16%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 291 LLFATIFLIIFGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGP--RIVSVSISS 348
           +L   + +II+G    + +   S+  +L+ ++  +A +  + D   + P     +V++  
Sbjct: 5   ILLLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIA-TVGYGDYSPSTPLGMYFTVTLIV 63

Query: 349 GGMLIFAMMLGLVSDAI 365
            G+  FA+ +  + + +
Sbjct: 64  LGIGTFAVAVERLLEFL 80
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Length = 103 Back     information, alignment and structure
>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]} Length = 116 Back     information, alignment and structure
>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]} Length = 116 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query917
d1id1a_153 Rck domain from putative potassium channel Kch {Es 99.91
d2fy8a1129 Potassium channel-related protein MthK {Archaeon M 99.85
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 99.82
d1id1a_153 Rck domain from putative potassium channel Kch {Es 99.82
d2fy8a1129 Potassium channel-related protein MthK {Archaeon M 99.75
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 99.73
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 99.6
d1r3jc_103 Potassium channel protein {Streptomyces coelicolor 99.5
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 99.49
d1xl4a2116 Inward rectifier potassium channel kirbac3.1 {Magn 99.1
d1p7ba2116 Inward rectifier potassium channel Kirbac1.1 {Burk 99.1
d1lnqa280 Potassium channel-related protein MthK {Archaeon M 99.04
d2fy8a292 Potassium channel-related protein MthK, C-terminal 98.39
d1vcta294 Hypothetical protein PH0236, C-terminal domain {Py 98.24
d2h8pc157 Potassium channel protein {Streptomyces coelicolor 98.16
d2fy8a292 Potassium channel-related protein MthK, C-terminal 96.97
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 96.5
d1vcta294 Hypothetical protein PH0236, C-terminal domain {Py 96.33
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 96.06
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 95.83
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 95.08
d1qyda_312 Pinoresinol-lariciresinol reductase {Giant arborvi 94.77
d1xg5a_257 Putative dehydrogenase ARPG836 (MGC4172) {Human (H 94.68
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 94.44
d1oaaa_259 Sepiapterin reductase {Mouse (Mus musculus) [TaxId 93.94
d1iy8a_258 Levodione reductase {Corynebacterium aquaticum [Ta 93.27
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 93.04
d1k2wa_256 Sorbitol dehydrogenase {Rhodobacter sphaeroides [T 92.71
d2blla1342 Polymyxin resistance protein ArnA (PrmI) {Escheric 92.64
d2gdza1254 15-hydroxyprostaglandin dehydrogenase, PGDH {Human 92.44
d1w6ua_294 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H 91.88
d1vl8a_251 Gluconate 5-dehydrogenase {Thermotoga maritima [Ta 91.84
d1nffa_244 Putative oxidoreductase Rv2002 {Mycobacterium tube 91.67
d1yb1a_244 17-beta-hydroxysteroid dehydrogenase type XI {Huma 91.49
d1bdba_276 Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps 91.47
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 91.44
d1h5qa_260 Mannitol dehydrogenase {Mushroom (Agaricus bisporu 91.24
d1xkqa_272 Hypothetical protein R05D8.7 {Caenorhabditis elega 91.09
d1hdca_254 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre 90.91
d2a4ka1241 beta-keto acyl carrier protein reductase {Thermus 90.91
d1zema1260 Xylitol dehydrogenase {Gluconobacter oxydans [TaxI 90.66
d2rhca1257 beta-keto acyl carrier protein reductase {Streptom 90.63
d1xhla_274 Hypothetical protein F25D1.5 {Caenorhabditis elega 90.41
d2ae2a_259 Tropinone reductase {Jimsonweed (Datura stramonium 90.35
d1hxha_253 3beta/17beta hydroxysteroid dehydrogenase {Comamon 90.11
d1spxa_264 Glucose dehydrogenase (5l265) {Nematode (Caenorhab 89.99
d1zk4a1251 R-specific alcohol dehydrogenase {Lactobacillus br 89.99
d1ydea1250 Retinal dehydrogenase/reductase 3 {Human (Homo sap 88.97
d1wmaa1275 Carbonyl reductase/20beta-hydroxysteroid dehydroge 88.87
d2c07a1251 beta-keto acyl carrier protein reductase {Malaria 88.74
d1fmca_255 7-alpha-hydroxysteroid dehydrogenase {Escherichia 88.48
d1xq1a_259 Tropinone reductase {Thale cress (Arabidopsis thal 88.18
d2bgka1268 Rhizome secoisolariciresinol dehydrogenase {Mayapp 87.68
d1yxma1297 Peroxisomal trans 2-enoyl CoA reductase {Human (Ho 87.36
d1q7ba_243 beta-keto acyl carrier protein reductase {Escheric 87.29
d1ae1a_258 Tropinone reductase {Jimsonweed (Datura stramonium 86.97
d1udca_338 Uridine diphosphogalactose-4-epimerase (UDP-galact 86.4
d1orra_338 CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 84.46
d1ulsa_242 beta-keto acyl carrier protein reductase {Thermus 84.07
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 83.31
d1pr9a_244 Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 82.92
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 82.65
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 82.5
d1xgka_350 Negative transcriptional regulator NmrA {Aspergill 82.41
d1gega_255 meso-2,3-butanediol dehydrogenase {Klebsiella pneu 82.38
d1rkxa_356 CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc 82.04
d1yo6a1250 Putative carbonyl reductase sniffer {Caenorhabditi 81.76
d1xhca2122 NADH oxidase /nitrite reductase {Pyrococcus furios 81.54
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 80.77
d2q46a1252 Hypothetical protein At5g02240 (T7H20_290) {Thale 80.48
d1snya_248 Carbonyl reductase sniffer {Fruit fly (Drosophila 80.42
d2bd0a1240 Bacterial sepiapterin reductase {Chlorobium tepidu 80.39
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.6e-23  Score=154.46  Aligned_cols=148  Identities=21%  Similarity=0.242  Sum_probs=125.8

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCCCC
Q ss_conf             03718999124049999999998200279992699995993789999972101358861899997789988885268545
Q 002475          381 EKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSK  460 (917)
Q Consensus       381 ~~~HiIIlG~g~~~~~li~eL~~~~~~~~~~~iVVLid~d~e~ie~~~~~~~~~~~~~~V~~i~GD~~d~e~L~rA~i~~  460 (917)
                      .+||+||||||+.+..++++|...      +..|+++|.|++......++.    ...++.++.||++++++|+++++++
T Consensus         2 ~knHiII~G~g~~g~~l~~~L~~~------~~~v~vId~d~~~~~~~~~~~----~~~~~~vi~Gd~~d~~~L~~a~i~~   71 (153)
T d1id1a_           2 RKDHFIVCGHSILAINTILQLNQR------GQNVTVISNLPEDDIKQLEQR----LGDNADVIPGDSNDSSVLKKAGIDR   71 (153)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCHHHHHHHHHH----HCTTCEEEESCTTSHHHHHHHTTTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHC------CCCEEEEECCCHHHHHHHHHH----HCCCCEEEECCCCCHHHHHHHCCCC
T ss_conf             988799989888999999999976------998799953305589999985----3399689990686467797735402


Q ss_pred             CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCC
Q ss_conf             45799953899987105999999999953059987439999559999888987399837885409999999999970885
Q 002475          461 ARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPG  540 (917)
Q Consensus       461 A~aIIilt~d~~~~~sDa~nl~~~L~ir~l~p~~~~~IIa~v~d~e~~~~l~~~Gad~VevV~~~~l~a~lLa~~~~~Pg  540 (917)
                      |+++|+++++      |..|+.+++.+|+++|  ..++|+++.++++.+.++.+|+|.|  |.|..++++.+++.+..|+
T Consensus        72 a~~vi~~~~~------d~~n~~~~~~~r~~~~--~~~iia~~~~~~~~~~l~~~Gad~v--i~p~~~~~~~l~~~l~~~~  141 (153)
T d1id1a_          72 CRAILALSDN------DADNAFVVLSAKDMSS--DVKTVLAVSDSKNLNKIKMVHPDII--LSPQLFGSEILARVLNGEE  141 (153)
T ss_dssp             CSEEEECSSC------HHHHHHHHHHHHHHTS--SSCEEEECSSGGGHHHHHTTCCSEE--ECHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEECCCC------HHHHHHHHHHHHHHCC--CCCEEEEECCHHHHHHHHHCCCCEE--ECHHHHHHHHHHHHHCCCC
T ss_conf             8799990454------8888899999998589--8736999769889999997799999--9889999999999847589


Q ss_pred             HHH-HHHHH
Q ss_conf             799-99998
Q 002475          541 LAQ-IWEDI  548 (917)
Q Consensus       541 i~~-vl~~L  548 (917)
                      +.. .+.++
T Consensus       142 v~~~~~~~~  150 (153)
T d1id1a_         142 INNDMLVSM  150 (153)
T ss_dssp             CCHHHHHHT
T ss_pred             CCHHHHHHH
T ss_conf             887899998
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]} Back     information, alignment and structure
>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d2fy8a2 d.286.1.1 (A:245-336) Potassium channel-related protein MthK, C-terminal domain {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d1vcta2 d.286.1.1 (A:108-201) Hypothetical protein PH0236, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2fy8a2 d.286.1.1 (A:245-336) Potassium channel-related protein MthK, C-terminal domain {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1vcta2 d.286.1.1 (A:108-201) Hypothetical protein PH0236, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Back     information, alignment and structure
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Back     information, alignment and structure
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Back     information, alignment and structure
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Back     information, alignment and structure
>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Back     information, alignment and structure
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Back     information, alignment and structure
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Back     information, alignment and structure
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Back     information, alignment and structure
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Back     information, alignment and structure
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Back     information, alignment and structure
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Back     information, alignment and structure
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Back     information, alignment and structure
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Back     information, alignment and structure