Citrus Sinensis ID: 002480

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------

MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEEEDDTDDLENEFDINDRKDPHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHALIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEVISDCISFSISDCISFSSS

cccccccccccccccEEEEEccccccccccccccccccccccccccccccccccEEEcccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccccccEEEEccccccccHHHHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEcccccccccccccccEEEEEEcccccccccccccHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHHccccccccEEEEEcccccccccccccccccccEEEEcccccccccccccEEccccEEEHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccHHHHcccccccHHHHHHHHHHHccccccccHHHHHHHHHHcEEcEEEEcccccccccccccccHHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcc

ccccccEEEccccccEEEEEEcccccccccHccccccEEEEccccccccccccEEEEccccccccccccEEEEcccccccccccccccHccccccccccccccccccccHccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccHcHccccccccEcccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccccccccccEEEEEEccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccEEccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEcccccccccccEEEccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccHHHHHcccHHHHHHHccccHHHEccccHHcccccccccHHHHHHHHHHHHHHcccccccccccEEEEEcccccHHHcccHHcccccEEEEEccccccccccccccHHHHHHHHHHHHHccHHEEEcccccEEEcccccccHHHHHHHHHHEEccHHHHHHHHHHHHHHHHHHccccEccccHHHHHHHHHHHHHHHHcc

matngrlvagshnrnefvliNADEVARVTSVKELSGQICQicgdeieitdngepfvacnecafpvcrpcyeyerregnqacpqcktrykrikgsprvdgdeeeddtddlenefdindrkdphHIAEAMLSSRlnigrgsqayvsgittpsevdsvsvaqeiplltygnedvgissdkhaliippfmgrgkrihpmsfpdgfmtlpprpmdpkkdlavyGYGTVAWKERMEEWKKKQNEKLQVVKHqggngggnndgdgvddpdlpmmdegrqplsrklpissskispyRLIILLRLVILGLFFHYrilhpvndayGLWLTSVICEIWFAVSWIldqfpkwdpivrETYLDRLSlryekegkpsdladiDIFVstvdpmkepplitaNTVLSILAvdypvdkvacyvsddgaAMLTFEALSETSEFARKWvpfckkfkieprapewyFAQKLDylkdkvnpsFIRERRAMKREYEEFKVRINGLVAMAQkvpedgwtmqdgtpwpgnnvrdhpgMIQVFLGqngvrdiegnllprlvyvsrekrpgfdhhkkaGAMNALIRVSAVIsnapyllnvdcdhyiNNSKALREAMCFmmdptsgkkicyvqfpqrfdgidrhdrysnrnvvffdinmkgldgiqgpiyvgtgcvfrrqalygydapvkkkpprktcnclpkwcccccrsrkkskkgksnkknkdtSKQIYALENIEEGiegidneksslmpqikfekkfgqspVFIASTLkeaggvptgastASLLNEAIHVISCgyedktdwgkeIGWIYGSVTEDILTGFkmhchgwrsvycipkrpafkgsapinlsDRLHQVLRWALGSVEILLSRhcpiwygygcglkplerfsyinsvvypitsipliayctlpaiclltgkfivpevisDCISFsisdcisfsss

matngrlvagshnrnefvliNADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERregnqacpqcktrykrikgsprvdgdeeeddtddlenefdindrkdpHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTygnedvgissdKHALIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVkhqggngggnndgdgVDDPDLPMMDEGRqplsrklpissskispYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLryekegkpsdladIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKkfkieprapewyfaqkldylkdkvnpsFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFdgidrhdrySNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYgydapvkkkpprktcnclpkwcccccrsrkkskkgksnkknkdtskqiyALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEVISDCISFSisdcisfsss

MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVdgdeeeddtddlenefdINDRKDPHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHALIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQggngggnndgdgvddPDLPMMDEGRQPLSRKLPISSSKISPYrliillrlvilglFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRktcnclpkwcccccrsrkkskkgksnkknkdtskQIYALenieegiegidneKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEVisdcisfsisdcisfsss

*************RNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQC*******************************************************QAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHALIIPPFMGRGKRIHPMSF***F************DLAVYGYGTVAWKERM*******************************************************ISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCC***********************************************FEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEVISDCISFSISDCIS****

****GRL*AGSHNRNEF***********************ICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRY******************DDLENEFDI***************************************************************************************************LAVYGYGTVAWKERM***********************************************KLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSL*********DLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQ********VNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKK*******************LENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEVISDCISFSISDCISFSSS

MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRI*****************LENEFDINDRKDPHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHALIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRS***************TSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEVISDCISFSISDCISFSSS

*****RLVAGSHNRNEFVLINADEVARVTSV*ELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKG***********DTDDLENEFDINDRKDPHHIAEAMLSSRLNI***************EVD******************************************************PMDPKKDLAVYGYGTVAWKERMEEWKKKQN**************************LPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCR*******************************EGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEVISDCISFSISDCISFSSS

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiii

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		917	2.2.26 [Sep-21-2011]
Q9SJ22		1088	Probable cellulose syntha	yes	no	0.966	0.814	0.776	0.0
Q94JQ6		1084	Cellulose synthase A cata	no	no	0.964	0.815	0.778	0.0
O48947		1084	Cellulose synthase A cata	no	no	0.966	0.817	0.784	0.0
Q8L778		1069	Cellulose synthase A cata	no	no	0.950	0.815	0.779	0.0
Q69V23		1093	Probable cellulose syntha	yes	no	0.982	0.824	0.709	0.0
Q851L8		1092	Probable cellulose syntha	yes	no	0.981	0.824	0.709	0.0
A2XNT2		1092	Probable cellulose syntha	N/A	no	0.981	0.824	0.709	0.0
Q6YVM4		1092	Probable cellulose syntha	no	no	0.974	0.818	0.703	0.0
Q69P51		1055	Cellulose synthase A cata	no	no	0.935	0.813	0.646	0.0
A2Z1C8		1055	Cellulose synthase A cata	N/A	no	0.935	0.813	0.646	0.0

>sp\|Q9SJ22\|CESA9_ARATH Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1	Back alignment and function desciption

 Score = 1437 bits (3719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/908 (77%), Positives = 783/908 (86%), Gaps = 22/908 (2%)

Query: 1   MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNE 60
           M T GRL+AGSHNRNEFVLINAD+ AR+ S +ELSGQ C+IC DEIE+TDNGEPF+ACNE
Sbjct: 1   MNTGGRLIAGSHNRNEFVLINADDTARIRSAEELSGQTCKICRDEIELTDNGEPFIACNE 60

Query: 61  CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEEEDDTDDLENEFDINDRKD 120
           CAFP CRPCYEYERREGNQACPQC TRYKRIKGSPRV+GDEE+DD DDLE+EF      D
Sbjct: 61  CAFPTCRPCYEYERREGNQACPQCGTRYKRIKGSPRVEGDEEDDDIDDLEHEFY---GMD 117

Query: 121 PHHIAEAMLS-SRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHA 179
           P H+ EA L   RLN GRG+          S + S S   E+PLLTY +ED  + SD+HA
Sbjct: 118 PEHVTEAALYYMRLNTGRGTDEV-------SHLYSASPGSEVPLLTYCDEDSDMYSDRHA 170

Query: 180 LIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEK 239
           LI+PP  G G R+H + F D F ++  RPM P+KDL VYGYG+VAWK+RME WKK+Q EK
Sbjct: 171 LIVPPSTGLGNRVHHVPFTDSFASIHTRPMVPQKDLTVYGYGSVAWKDRMEVWKKQQIEK 230

Query: 240 LQVVKHQGGNGGGNNDGDG-----VDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILL 294
           LQVVK++  N G   DGDG     +DDP LPMMDEGRQPLSRKLPI SS+I+PYR++I  
Sbjct: 231 LQVVKNERVNDG---DGDGFIVDELDDPGLPMMDEGRQPLSRKLPIRSSRINPYRMLIFC 287

Query: 295 RLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSL 354
           RL ILGLFFHYRILHPVNDA+GLWLTSVICEIWFAVSWILDQFPKW PI RETYLDRLSL
Sbjct: 288 RLAILGLFFHYRILHPVNDAFGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSL 347

Query: 355 RYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAML 414
           RYEKEGKPS+LA +D+FVSTVDP+KEPPLITANTVLSILAVDYPV+KVACYVSDDGAAML
Sbjct: 348 RYEKEGKPSELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAML 407

Query: 415 TFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYE 474
           TFEALS T+EFARKWVPFCKKF IEPRAPEWYF+QK+DYLK KV+P+F+ ERRAMKR+YE
Sbjct: 408 TFEALSYTAEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKHKVDPAFVMERRAMKRDYE 467

Query: 475 EFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPR 534
           EFKV+IN LV+++QKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLG +GV D++GN LPR
Sbjct: 468 EFKVKINALVSVSQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVCDMDGNELPR 527

Query: 535 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM 594
           LVYVSREKRPGFDHHKKAGAMN+LIRVSAV+SNAPYLLNVDCDHYINNSKA+REAMCFMM
Sbjct: 528 LVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMM 587

Query: 595 DPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQA 654
           DP SGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQA
Sbjct: 588 DPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQA 647

Query: 655 LYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSK---KGKSNKKNKDTSKQIYALENIE 711
           LYG+DAP KK+PP +TCNC PKWCC CC  RKK     K    KK K+TSKQI+ALE+IE
Sbjct: 648 LYGFDAPKKKQPPGRTCNCWPKWCCLCCGMRKKKTGKVKDNQRKKPKETSKQIHALEHIE 707

Query: 712 EGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCG 771
           EG++  + E +S   Q+K EKKFGQSPV +ASTL   GGVP+  + ASLL E+I VISCG
Sbjct: 708 EGLQVTNAENNSETAQLKLEKKFGQSPVLVASTLLLNGGVPSNVNPASLLRESIQVISCG 767

Query: 772 YEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQV 831
           YE+KT+WGKEIGWIYGSVTEDILTGFKMHCHGWRSVYC+PKR AFKGSAPINLSDRLHQV
Sbjct: 768 YEEKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQV 827

Query: 832 LRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLT 891
           LRWALGSVEI LSRHCPIWYGYG GLK LERFSYINSVVYP TS+PL+ YC+LPAICLLT
Sbjct: 828 LRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYCSLPAICLLT 887

Query: 892 GKFIVPEV 899
           GKFIVPE+
Sbjct: 888 GKFIVPEI 895

Probable catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2

>sp\|Q94JQ6\|CESA6_ARATH Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2	Back alignment and function description

>sp\|O48947\|CESA2_ARATH Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1	Back alignment and function description

>sp\|Q8L778\|CESA5_ARATH Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2	Back alignment and function description

>sp\|Q69V23\|CESA3_ORYSJ Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1	Back alignment and function description

>sp\|Q851L8\|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1	Back alignment and function description

>sp\|A2XNT2\|CESA5_ORYSI Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1	Back alignment and function description

>sp\|Q6YVM4\|CESA6_ORYSJ Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1	Back alignment and function description

>sp\|Q69P51\|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1	Back alignment and function description

>sp\|A2Z1C8\|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		917
255566630		1095	Cellulose synthase A catalytic subunit 6	0.972	0.814	0.863	0.0
224082476		1095	predicted protein [Populus trichocarpa]	0.978	0.819	0.886	0.0
429326440		1093	cellulose synthase [Populus tomentosa]	0.978	0.820	0.880	0.0
224066625		1093	cellulose synthase [Populus trichocarpa]	0.978	0.820	0.890	0.0
376315432		1090	CESA9 [Gossypium hirsutum]	0.973	0.819	0.863	0.0
356535774		1095	PREDICTED: cellulose synthase A catalyti	0.978	0.819	0.851	0.0
225460638		1096	PREDICTED: cellulose synthase A catalyti	0.978	0.818	0.873	0.0
429326442		1097	cellulose synthase [Populus tomentosa]	0.978	0.817	0.875	0.0
296081195		1067	unnamed protein product [Vitis vinifera]	0.978	0.840	0.873	0.0
47078494		1095	cellulose synthase [Populus tremula x Po	0.978	0.819	0.878	0.0

>gi\|255566630\|ref\|XP_002524299.1\| Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis] gi\|223536390\|gb\|EEF38039.1\| Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1597 bits (4134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 789/914 (86%), Positives = 842/914 (92%), Gaps = 22/914 (2%)

Query: 1   MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNE 60
           M T GRL+AGSHNRNEFVLINADE+ARVTSVKELSGQICQICGDEIEIT +GEPFVACNE
Sbjct: 1   METKGRLIAGSHNRNEFVLINADEIARVTSVKELSGQICQICGDEIEITVDGEPFVACNE 60

Query: 61  CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEEEDDTDDLENEFDINDRKD 120
           CAFPVCRPCYEYERREGN+ACPQCKT YKRIKGSPRV+GDEEE+DTDDLENEFDI+  ++
Sbjct: 61  CAFPVCRPCYEYERREGNRACPQCKTIYKRIKGSPRVEGDEEEEDTDDLENEFDISASQN 120

Query: 121 PHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHAL 180
              IAEA+ S+ LNI   SQ  VSG   P E+DSV +  EIPLLTY  EDVGISSDKHAL
Sbjct: 121 ---IAEAIFSAHLNISTASQVNVSGFAAPPELDSVPIVSEIPLLTYHEEDVGISSDKHAL 177

Query: 181 IIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKL 240
           I+PPF  R KRIHPM FPD  M+LPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQ+EKL
Sbjct: 178 IVPPF--RAKRIHPMPFPDSSMSLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQHEKL 235

Query: 241 QVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILG 300
           QVVKHQGGN    NDG+ +DDPDLPMMDEGRQPLSRKLPISSSKISPYRLII+LRLVILG
Sbjct: 236 QVVKHQGGN----NDGNEIDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIIILRLVILG 291

Query: 301 LFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEG 360
           LFFHYR+LHPVNDAYGLWLTS +CEIWFAVSWI DQ PKW PI RETYLDRLSLRYEK+G
Sbjct: 292 LFFHYRLLHPVNDAYGLWLTSTVCEIWFAVSWIFDQLPKWYPIERETYLDRLSLRYEKDG 351

Query: 361 KPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALS 420
           KPS+LA IDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALS
Sbjct: 352 KPSELAAIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALS 411

Query: 421 ETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRI 480
           ETSEFARKWVPFCKK+KIEPRAPEWYF +K+DYLKDKV+PSFIRERRAMKREYEEF+VRI
Sbjct: 412 ETSEFARKWVPFCKKYKIEPRAPEWYFGEKVDYLKDKVDPSFIRERRAMKREYEEFRVRI 471

Query: 481 NGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSR 540
           NGLV+ AQKVPE+GWTMQDGTPWPGNNVRDHPGMIQVFLGQ+GV D+EGN LP LVYVSR
Sbjct: 472 NGLVSTAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQHGVHDVEGNQLPCLVYVSR 531

Query: 541 EKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGK 600
           EKRPGFDHHKKAGAMNAL+RVSA+ISNAPYLLNVDCDHYINNSKALR+AMCFMMDPTSGK
Sbjct: 532 EKRPGFDHHKKAGAMNALVRVSAIISNAPYLLNVDCDHYINNSKALRDAMCFMMDPTSGK 591

Query: 601 KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDA 660
           KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDA
Sbjct: 592 KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDA 651

Query: 661 PVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKS-------------NKKNKDTSKQIYAL 707
           P+KKKPP KTCNC PKWCC CCRSRKK+KKGKS              KKN++ SKQIYAL
Sbjct: 652 PIKKKPPGKTCNCWPKWCCFCCRSRKKNKKGKSAEKKNREASKQMHAKKNREASKQIYAL 711

Query: 708 ENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHV 767
           ENIEEGIEG+DNEKS LMPQIKFEKKFGQS VFIASTL E GG+P GA++ASLL EAIHV
Sbjct: 712 ENIEEGIEGVDNEKSELMPQIKFEKKFGQSAVFIASTLMEEGGIPKGATSASLLKEAIHV 771

Query: 768 ISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDR 827
           ISCGYEDK++WGKE+GWIYGSVTEDILTGFKMHCHGWRSVYCIP+RPAFKGSAPINLSDR
Sbjct: 772 ISCGYEDKSEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPRRPAFKGSAPINLSDR 831

Query: 828 LHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAI 887
           LHQVLRWALGSVEILLS+HCPIWYGYGCGLKPLERFSYINSVVYP+TSIPL+AYCTLPA+
Sbjct: 832 LHQVLRWALGSVEILLSKHCPIWYGYGCGLKPLERFSYINSVVYPLTSIPLVAYCTLPAV 891

Query: 888 CLLTGKFIVPEVIS 901
           CLLTGKFIVPE+ +
Sbjct: 892 CLLTGKFIVPELTN 905

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class: N/A

Phylum: Streptophyta

Superkingdom:

>gi\|224082476\|ref\|XP_002306707.1\| predicted protein [Populus trichocarpa] gi\|222856156\|gb\|EEE93703.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|429326440\|gb\|AFZ78560.1\| cellulose synthase [Populus tomentosa]	Back alignment and taxonomy information

>gi\|224066625\|ref\|XP_002302169.1\| cellulose synthase [Populus trichocarpa] gi\|222843895\|gb\|EEE81442.1\| cellulose synthase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|376315432\|gb\|AFB18639.1\| CESA9 [Gossypium hirsutum]	Back alignment and taxonomy information

>gi\|356535774\|ref\|XP_003536418.1\| PREDICTED: cellulose synthase A catalytic subunit 6 [UDP-forming]-like [Glycine max]	Back alignment and taxonomy information

>gi\|225460638\|ref\|XP_002265955.1\| PREDICTED: cellulose synthase A catalytic subunit 6 [UDP-forming] [Vitis vinifera]	Back alignment and taxonomy information

>gi\|429326442\|gb\|AFZ78561.1\| cellulose synthase [Populus tomentosa]	Back alignment and taxonomy information

>gi\|296081195\|emb\|CBI18221.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|47078494\|gb\|AAT09895.1\| cellulose synthase [Populus tremula x Populus tremuloides]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		917
TAIR\|locus:2136308		1084	CESA2 "cellulose synthase A2"	0.711	0.601	0.756	0.0
TAIR\|locus:2176090		1084	CESA6 "cellulose synthase 6" [	0.712	0.602	0.752	0.0
TAIR\|locus:2052576		1088	CESA9 "cellulose synthase A9"	0.716	0.603	0.746	0.0
TAIR\|locus:2178193		1069	CESA5 "cellulose synthase 5" [	0.558	0.478	0.790	0.0
TAIR\|locus:2127776		1081	CESA1 "cellulose synthase 1" [	0.699	0.592	0.607	1.5e-294
TAIR\|locus:2178935		1026	IRX3 "IRREGULAR XYLEM 3" [Arab	0.467	0.418	0.704	8.3e-294
TAIR\|locus:2040080		1065	CESA10 "cellulose synthase 10"	0.539	0.464	0.659	1.4e-289
TAIR\|locus:2156789		1065	CEV1 "CONSTITUTIVE EXPRESSION	0.676	0.582	0.607	3.5e-286
TAIR\|locus:2172457		1049	CESA4 "cellulose synthase A4"	0.479	0.419	0.689	4.4e-282
TAIR\|locus:2124167		985	IRX1 "IRREGULAR XYLEM 1" [Arab	0.486	0.452	0.676	5e-266

TAIR\|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2691 (952.3 bits), Expect = 0., Sum P(2) = 0.
 Identities = 507/670 (75%), Positives = 555/670 (82%)

Query:     1 MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNE 60
             M T GRL+AGSHNRNEFVLINADE AR+ SV+ELSGQ CQICGDEIE+T + E FVACNE
Sbjct:     1 MNTGGRLIAGSHNRNEFVLINADESARIRSVQELSGQTCQICGDEIELTVSSELFVACNE 60

Query:    61 CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVXXXXXXXXXXXXXXXXXINDRKD 120
             CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRV                  +   D
Sbjct:    61 CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDDEEEEDIDDLEYE-FDHGMD 119

Query:   121 PHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHAL 180
             P H AEA LSSRLN GRG             +DS     +IPLLTY +ED  + SD+HAL
Sbjct:   120 PEHAAEAALSSRLNTGRGG------------LDSAPPGSQIPLLTYCDEDADMYSDRHAL 167

Query:   181 IIPPFMGRGKRIHPMSFPDGFMTLPP--RPMDPKKDLAVYGYGTVAWKERMEEWKKKQNE 238
             I+PP  G G R++P  F D   + PP  R M P+KD+A YGYG+VAWK+RME WK++Q E
Sbjct:   168 IVPPSTGYGNRVYPAPFTDS--SAPPQARSMVPQKDIAEYGYGSVAWKDRMEVWKRRQGE 225

Query:   239 KLQVVKHQXXXXXXXXXXXXXXX-PDLPMMDEGRQPLSRKLPISSSKISPYXXXXXXXXX 297
             KLQV+KH+                PD+PMMDEGRQPLSRKLPI SS+I+PY         
Sbjct:   226 KLQVIKHEGGNNGRGSNDDDELDDPDMPMMDEGRQPLSRKLPIRSSRINPYRMLILCRLA 285

Query:   298 XXXXFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYE 357
                 FFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKW PI RETYLDRLSLRYE
Sbjct:   286 ILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYE 345

Query:   358 KEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFE 417
             KEGKPS LA +D+FVSTVDP+KEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFE
Sbjct:   346 KEGKPSGLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFE 405

Query:   418 ALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFK 477
             ALS+T+EFARKWVPFCKKF IEPRAPEWYF+QK+DYLK+KV+P+F+RERRAMKR+YEEFK
Sbjct:   406 ALSDTAEFARKWVPFCKKFNIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKRDYEEFK 465

Query:   478 VRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVY 537
             V+IN LVA AQKVPE+GWTMQDGTPWPGNNVRDHPGMIQVFLG +GVRD +GN LPRLVY
Sbjct:   466 VKINALVATAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDTDGNELPRLVY 525

Query:   538 VSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPT 597
             VSREKRPGFDHHKKAGAMN+LIRVSAV+SNAPYLLNVDCDHYINNSKA+RE+MCFMMDP 
Sbjct:   526 VSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIRESMCFMMDPQ 585

Query:   598 SGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 657
             SGKK+CYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG
Sbjct:   586 SGKKVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 645

Query:   658 YDAPVKKKPP 667
             +DAP KKKPP
Sbjct:   646 FDAPKKKKPP 655

GO:0005886 "plasma membrane" evidence=ISM;IDA;TAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016759 "cellulose synthase activity" evidence=ISS;IMP

GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA

GO:0030244 "cellulose biosynthetic process" evidence=IEA;IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0009833 "primary cell wall biogenesis" evidence=TAS

TAIR\|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2Z1C8	CESA9_ORYSI	2, ., 4, ., 1, ., 1, 2	0.6460	0.9356	0.8132	N/A	no
O48947	CESA2_ARATH	2, ., 4, ., 1, ., 1, 2	0.7842	0.9661	0.8173	no	no
Q94JQ6	CESA6_ARATH	2, ., 4, ., 1, ., 1, 2	0.7783	0.9640	0.8154	no	no
Q851L8	CESA5_ORYSJ	2, ., 4, ., 1, ., 1, 2	0.7095	0.9814	0.8241	yes	no
Q6YVM4	CESA6_ORYSJ	2, ., 4, ., 1, ., 1, 2	0.7038	0.9749	0.8186	no	no
A2XNT2	CESA5_ORYSI	2, ., 4, ., 1, ., 1, 2	0.7095	0.9814	0.8241	N/A	no
A2Y0X2	CESA1_ORYSI	2, ., 4, ., 1, ., 1, 2	0.6538	0.9465	0.8066	N/A	no
Q8L778	CESA5_ARATH	2, ., 4, ., 1, ., 1, 2	0.7798	0.9509	0.8157	no	no
Q9SJ22	CESA9_ARATH	2, ., 4, ., 1, ., 1, 2	0.7764	0.9661	0.8143	yes	no
Q69V23	CESA3_ORYSJ	2, ., 4, ., 1, ., 1, 2	0.7095	0.9825	0.8243	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.976
4th Layer	2.4.1.12	0.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		917
PLN02436		1094	PLN02436, PLN02436, cellulose synthase A	0.0
PLN02400		1085	PLN02400, PLN02400, cellulose synthase	0.0
PLN02638		1079	PLN02638, PLN02638, cellulose synthase A (UDP-form	0.0
PLN02189		1040	PLN02189, PLN02189, cellulose synthase	0.0
PLN02915		1044	PLN02915, PLN02915, cellulose synthase A [UDP-form	0.0
PLN02195		977	PLN02195, PLN02195, cellulose synthase A	0.0
pfam03552		716	pfam03552, Cellulose_synt, Cellulose synthase	0.0
PLN02248		1135	PLN02248, PLN02248, cellulose synthase-like protei	0.0
PLN02893		734	PLN02893, PLN02893, Cellulose synthase-like protei	2e-95
PLN02190		756	PLN02190, PLN02190, cellulose synthase-like protei	3e-93
PLN02893		734	PLN02893, PLN02893, Cellulose synthase-like protei	2e-39
PLN02190		756	PLN02190, PLN02190, cellulose synthase-like protei	6e-25
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	1e-14
PLN02195		977	PLN02195, PLN02195, cellulose synthase A	9e-13
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	8e-12
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	2e-10
PRK11498		852	PRK11498, bcsA, cellulose synthase catalytic subun	7e-08
COG1215		439	COG1215, COG1215, Glycosyltransferases, probably i	1e-07
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	4e-06
cd06423		180	cd06423, CESA_like, CESA_like is the cellulose syn	2e-05
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	1e-04
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	2e-04
COG1215		439	COG1215, COG1215, Glycosyltransferases, probably i	4e-04
COG5175		480	COG5175, MOT2, Transcriptional repressor [Transcri	4e-04
cd06435		236	cd06435, CESA_NdvC_like, NdvC_like proteins in thi	4e-04
pfam14446		55	pfam14446, Prok-RING_1, Prokaryotic RING finger fa	5e-04
pfam13632		194	pfam13632, Glyco_trans_2_3, Glycosyl transferase f	7e-04
pfam13641		229	pfam13641, Glyco_tranf_2_3, Glycosyltransferase li	0.002

>gnl\|CDD\|215239 PLN02436, PLN02436, cellulose synthase A	Back alignment and domain information

 Score = 1922 bits (4980), Expect = 0.0
 Identities = 783/904 (86%), Positives = 828/904 (91%), Gaps = 7/904 (0%)

Query: 1   MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNE 60
           M T GRL+AGSHNRNEFVLINADE+AR+ SV+ELSGQ CQICGDEIE+T +GEPFVACNE
Sbjct: 1   MNTGGRLIAGSHNRNEFVLINADEIARIRSVQELSGQTCQICGDEIELTVDGEPFVACNE 60

Query: 61  CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEEEDDTDDLENEFDI-NDRK 119
           CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRV+GDEEEDD DDLENEFD  N+  
Sbjct: 61  CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEEEDDIDDLENEFDYGNNGL 120

Query: 120 DPHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHA 179
           DP  +AEAMLSSRLN GR S   VSGI TPSE+DS     +IPLLTYG EDV ISSD+HA
Sbjct: 121 DPEQVAEAMLSSRLNTGRHSN--VSGIATPSELDSAPPGSQIPLLTYGEEDVEISSDRHA 178

Query: 180 LIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEK 239
           LI+PP  G G R+HPM FPD   +L PRPM P+KDLAVYGYG+VAWK+RMEEWKKKQNEK
Sbjct: 179 LIVPPSTGHGNRVHPMPFPDSSASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQNEK 238

Query: 240 LQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVIL 299
           LQVVKH+GGN GGNNDGD +DDPDLPMMDEGRQPLSRKLPI SSKI+PYR+II+LRLVIL
Sbjct: 239 LQVVKHEGGNDGGNNDGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVIL 298

Query: 300 GLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKE 359
           GLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKW PI RETYLDRLSLRYEKE
Sbjct: 299 GLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKE 358

Query: 360 GKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEAL 419
           GKPS+LA +D+FVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEAL
Sbjct: 359 GKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEAL 418

Query: 420 SETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVR 479
           SETSEFARKWVPFCKKF IEPRAPEWYF+QK+DYLK+KV+P+F+RERRAMKREYEEFKV+
Sbjct: 419 SETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVK 478

Query: 480 INGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVS 539
           IN LVA AQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLG +GVRD+EGN LPRLVYVS
Sbjct: 479 INALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVS 538

Query: 540 REKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSG 599
           REKRPGFDHHKKAGAMN+LIRVSAV+SNAPYLLNVDCDHYINNSKALREAMCFMMDP SG
Sbjct: 539 REKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSG 598

Query: 600 KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 659
           KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD
Sbjct: 599 KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 658

Query: 660 APVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKS----NKKNKDTSKQIYALENIEEGIE 715
           AP KKKPP KTCNC PKWCC CC SRKK KK KS     KKN++ SKQI+ALENIEEGIE
Sbjct: 659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIE 718

Query: 716 GIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDK 775
           G +NEKSS  PQ+K EKKFGQSPVF+ASTL E GGVP  AS ASLL EAI VISCGYEDK
Sbjct: 719 GSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDK 778

Query: 776 TDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWA 835
           T+WGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWA
Sbjct: 779 TEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWA 838

Query: 836 LGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFI 895
           LGSVEI LSRHCPIWYGYG GLK LERFSYINSVVYP TSIPLI YCTLPAICLLTGKFI
Sbjct: 839 LGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFI 898

Query: 896 VPEV 899
           VPE+
Sbjct: 899 VPEI 902

Length = 1094

>gnl\|CDD\|215224 PLN02400, PLN02400, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215121 PLN02189, PLN02189, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215124 PLN02195, PLN02195, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|217611 pfam03552, Cellulose_synt, Cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215138 PLN02248, PLN02248, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215483 PLN02893, PLN02893, Cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215122 PLN02190, PLN02190, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215483 PLN02893, PLN02893, Cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215122 PLN02190, PLN02190, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|215124 PLN02195, PLN02195, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>gnl\|CDD\|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|227502 COG5175, MOT2, Transcriptional repressor [Transcription]	Back alignment and domain information

>gnl\|CDD\|133057 cd06435, CESA_NdvC_like, NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase	Back alignment and domain information

>gnl\|CDD\|222758 pfam14446, Prok-RING_1, Prokaryotic RING finger family 1	Back alignment and domain information

>gnl\|CDD\|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2	Back alignment and domain information

>gnl\|CDD\|222281 pfam13641, Glyco_tranf_2_3, Glycosyltransferase like family 2	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		917
PLN02436		1094	cellulose synthase A	100.0
PLN02400		1085	cellulose synthase	100.0
PLN02638		1079	cellulose synthase A (UDP-forming), catalytic subu	100.0
PLN02189		1040	cellulose synthase	100.0
PLN02915		1044	cellulose synthase A [UDP-forming], catalytic subu	100.0
PLN02195		977	cellulose synthase A	100.0
PLN02248		1135	cellulose synthase-like protein	100.0
PF03552		720	Cellulose_synt: Cellulose synthase; InterPro: IPR0	100.0
PLN02190		756	cellulose synthase-like protein	100.0
PLN02893		734	Cellulose synthase-like protein	100.0
TIGR03030		713	CelA cellulose synthase catalytic subunit (UDP-for	100.0
PRK11498		852	bcsA cellulose synthase catalytic subunit; Provisi	100.0
PF14569		80	zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A.	100.0
PRK05454		691	glucosyltransferase MdoH; Provisional	100.0
cd04191		254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	100.0
COG1215		439	Glycosyltransferases, probably involved in cell wa	100.0
PRK14583		444	hmsR N-glycosyltransferase; Provisional	99.97
TIGR03111		439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	99.96
PRK11204		420	N-glycosyltransferase; Provisional	99.96
PRK14716		504	bacteriophage N4 adsorption protein B; Provisional	99.95
cd06421		234	CESA_CelA_like CESA_CelA_like are involved in the	99.94
cd06437		232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	99.94
PRK11234		727	nfrB bacteriophage N4 adsorption protein B; Provis	99.94
cd06427		241	CESA_like_2 CESA_like_2 is a member of the cellulo	99.92
cd06435		236	CESA_NdvC_like NdvC_like proteins in this family a	99.92
PF13641		228	Glyco_tranf_2_3: Glycosyltransferase like family 2	99.9
PRK15489		703	nfrB bacteriophage N4 adsorption protein B; Provis	99.86
cd04190		244	Chitin_synth_C C-terminal domain of Chitin Synthas	99.86
TIGR03472		373	HpnI hopanoid biosynthesis associated glycosyl tra	99.84
cd04192		229	GT_2_like_e Subfamily of Glycosyltransferase Famil	99.84
cd02520		196	Glucosylceramide_synthase Glucosylceramide synthas	99.83
cd06434		235	GT2_HAS Hyaluronan synthases catalyze polymerizati	99.8
cd06439		251	CESA_like_1 CESA_like_1 is a member of the cellulo	99.78
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	99.75
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	99.72
COG2943		736	MdoH Membrane glycosyltransferase [Cell envelope b	99.71
PF13632		193	Glyco_trans_2_3: Glycosyl transferase family group	99.69
cd06436		191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	99.58
cd06438		183	EpsO_like EpsO protein participates in the methano	99.49
cd04184		202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	99.43
cd04195		201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	99.36
PF13506		175	Glyco_transf_21: Glycosyl transferase family 21	99.29
cd06433		202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	99.24
cd02510		299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	99.23
cd02522		221	GT_2_like_a GT_2_like_a represents a glycosyltrans	99.23
cd04196		214	GT_2_like_d Subfamily of Glycosyltransferase Famil	99.2
cd06420		182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	99.17
cd04186		166	GT_2_like_c Subfamily of Glycosyltransferase Famil	99.15
PLN02726		243	dolichyl-phosphate beta-D-mannosyltransferase	99.09
cd06913		219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	99.09
PF03142		527	Chitin_synth_2: Chitin synthase; InterPro: IPR0048	99.08
cd06442		224	DPM1_like DPM1_like represents putative enzymes si	99.04
cd02526		237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	99.03
cd06423		180	CESA_like CESA_like is the cellulose synthase supe	99.03
cd04185		202	GT_2_like_b Subfamily of Glycosyltransferase Famil	99.02
PF14570		48	zf-RING_4: RING/Ubox like zinc-binding domain; PDB	99.01
PF00535		169	Glycos_transf_2: Glycosyl transferase family 2; In	99.0
PRK10073		328	putative glycosyl transferase; Provisional	98.81
cd04188		211	DPG_synthase DPG_synthase is involved in protein N	98.8
PRK10018		279	putative glycosyl transferase; Provisional	98.74
cd04179		185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	98.71
TIGR01556		281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	98.66
PRK10063		248	putative glycosyl transferase; Provisional	98.62
cd00761		156	Glyco_tranf_GTA_type Glycosyltransferase family A	98.55
PF10111		281	Glyco_tranf_2_2: Glycosyltransferase like family 2	98.51
cd04187		181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	98.48
KOG2571		862	consensus Chitin synthase/hyaluronan synthase (gly	98.47
PTZ00260		333	dolichyl-phosphate beta-glucosyltransferase; Provi	98.42
COG1216		305	Predicted glycosyltransferases [General function p	98.41
PRK13915		306	putative glucosyl-3-phosphoglycerate synthase; Pro	98.23
PRK10714		325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	97.68
COG0463		291	WcaA Glycosyltransferases involved in cell wall bi	97.4
cd02511		229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	97.32
KOG2547		431	consensus Ceramide glucosyltransferase [Lipid tran	97.32
COG5175		480	MOT2 Transcriptional repressor [Transcription]	96.79
PF14446		54	Prok-RING_1: Prokaryotic RING finger family 1	95.76
cd02514		334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	95.66
TIGR00570		309	cdk7 CDK-activating kinase assembly factor MAT1. A	95.5
cd00162		45	RING RING-finger (Really Interesting New Gene) dom	89.0
PF05290		140	Baculo_IE-1: Baculovirus immediate-early protein (	88.15
KOG2978		238	consensus Dolichol-phosphate mannosyltransferase [	87.18
smart00504		63	Ubox Modified RING finger domain. Modified RING fi	83.19
KOG2977		323	consensus Glycosyltransferase [General function pr	82.75
PF02364		817	Glucan_synthase: 1,3-beta-glucan synthase componen	80.74

>PLN02436 cellulose synthase A	Back alignment and domain information

Probab=100.00  E-value=6.4e-284  Score=2471.55  Aligned_cols=910  Identities=85%  Similarity=1.409  Sum_probs=843.3

Q ss_pred             CCCCCcccccccCCceEEEeecccccccccccccCCccccccCcccccCCCCCceeecCCCCCCcchhhHHHHHhhcCCC
Q 002480            1 MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQA   80 (917)
Q Consensus         1 me~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~CqiCgd~Vg~~~~Ge~FvaC~eC~FPVCRpCYeyErkeG~q~   80 (917)
                      ||+++|||||||||||||+|++|++.++||++++++||||||||+||+|+|||+|||||||+|||||||||||||||||+
T Consensus         1 m~~~~~~~~gs~~r~e~~~~~~d~~~~~k~~~~~~~~iCqICGD~Vg~t~dGe~FVACn~C~fpvCr~Cyeyer~eg~~~   80 (1094)
T PLN02436          1 MNTGGRLIAGSHNRNEFVLINADEIARIRSVQELSGQTCQICGDEIELTVDGEPFVACNECAFPVCRPCYEYERREGNQA   80 (1094)
T ss_pred             CCcccccccccccccceeEeccccccCCCCccccCCccccccccccCcCCCCCEEEeeccCCCccccchhhhhhhcCCcc
Confidence            99999999999999999999999777789999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCccccccccccCC-CCCchhhHHHhhhhccccCCCCCccccCccCCCccccccccC
Q 002480           81 CPQCKTRYKRIKGSPRVDGDEEEDDTDDLENEFDIND-RKDPHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQ  159 (917)
Q Consensus        81 CPqCktrYkr~kGsprv~gd~ee~~~dd~e~ef~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (917)
                      |||||||||||||||||+||||||++||+||||+|.+ +++.++++|+|+||+|++|++.+.....+..+.+.  ....+
T Consensus        81 Cpqckt~Y~r~kgs~~~~~d~ee~~~dd~e~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  158 (1094)
T PLN02436         81 CPQCKTRYKRIKGSPRVEGDEEEDDIDDLENEFDYGNNGLDPEQVAEAMLSSRLNTGRHSNVSGIATPSELDS--APPGS  158 (1094)
T ss_pred             CcccCCchhhccCCCCcCCccccccchhhhhhhcCcccccchHHHHHHHhhhhcccCcccccccccccccccc--CCCcC
Confidence            9999999999999999999999999999999999873 23347889999999999998876221100011111  01125


Q ss_pred             CCcccccCC--CCCCCCCcccccccCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCccccCcCccccchhhHHHHHhhh
Q 002480          160 EIPLLTYGN--EDVGISSDKHALIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQN  237 (917)
Q Consensus       160 ~~~~l~~~~--~~~~~~~~~h~~~~~~~~g~g~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~~wk~~~~  237 (917)
                      ++|+|++++  +|++  +++|++++++.+|.||||||+||+|+++++++|.+||+||+++||||||+||||||+||+||+
T Consensus       159 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~wkerv~~wk~kq~  236 (1094)
T PLN02436        159 QIPLLTYGEEDVEIS--SDRHALIVPPSTGHGNRVHPMPFPDSSASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQN  236 (1094)
T ss_pred             CCcccccCcccCccC--CcccccccCCcccccccccccccccccccCCCccCCccccccccccCcHHHHHHHHHHHhhhh
Confidence            789999986  6655  677887788888889999999999999999999999999999999999999999999999998


Q ss_pred             hhhhhcccCCCCCCCCCCCCCCCCCCCcCCccCCCCcceeeecCCCCcchhHHHHHHHHHHHHHhhheecccccCchhhH
Q 002480          238 EKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGL  317 (917)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~k~~~~~~~~~~yR~~~v~~l~~l~~yl~wRi~~~~~~a~~l  317 (917)
                      +|++++.+..+..+|++++.+.+++|++++|++++||+||+++++++|+|||++++++|+++++||+||+++++.+++|+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~  316 (1094)
T PLN02436        237 EKLQVVKHEGGNDGGNNDGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGL  316 (1094)
T ss_pred             hcccccccccccccCCCCCCCCCCcccccccccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHH
Confidence            55555544322212344432334678889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccchhhhHhhhhhhcCCCCCCCCceeEEEecCCCCCCCHHHHHHHHHHHHcCCC
Q 002480          318 WLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDY  397 (917)
Q Consensus       318 wl~~~i~Ei~~a~~wiL~q~~kw~Pi~R~t~~drL~~r~e~~~~~~~lP~VDVfV~T~dP~kEpp~v~~nTvls~la~dY  397 (917)
                      |+++++||+||+|+|+|+|++||+||+|+||+|||++||++++++++||+|||||+|+||.||||++|+||||||||+||
T Consensus       317 Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DY  396 (1094)
T PLN02436        317 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDY  396 (1094)
T ss_pred             HHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcc
Confidence            99999999999999999999999999999999999999999888999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEecCCCchhhHHHHHhHHHHhhhhHhHHHhhcCCCCChhhhhhhccccccCCCCchhHHHHHHHHHHHHHHH
Q 002480          398 PVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFK  477 (917)
Q Consensus       398 P~~kl~~yVsDDG~s~ltf~al~E~a~fA~~WvPfCkk~~iepraPe~yF~~k~d~~~~~~~p~fv~err~~kreYee~k  477 (917)
                      |+|||+|||||||+++||||||.|||+|||+||||||||+|||||||+||++|.|++++|++|+|++|||+|||||||||
T Consensus       397 P~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K  476 (1094)
T PLN02436        397 PVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFK  476 (1094)
T ss_pred             cccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCcccCCCCCCCCCCCCCCchhhhhhhcCCCCccccCCCcCcEEEEeccCCCCCCCCCchhhhHH
Q 002480          478 VRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNA  557 (917)
Q Consensus       478 vri~~l~~~~~kvp~e~w~m~dgt~wpg~~~rdhp~~iqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGALNa  557 (917)
                      +|||+|+++++++|+++|+|+|||+|||++++|||+||||||+++|+.|.+|++||+|||||||||||++||+||||||+
T Consensus       477 ~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNa  556 (1094)
T PLN02436        477 VKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNS  556 (1094)
T ss_pred             HHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhh
Confidence            99999999889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCccEEEEecCccccCCCccccccchhhhhHhhhcccccc
Q 002480          558 LIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDG  637 (917)
Q Consensus       558 llrvSa~ltngp~Il~lDcDhyip~~~~Lr~amcff~Dp~~g~kva~VQ~PQ~F~nid~~Dryan~~~vFfdi~~~glDg  637 (917)
                      |+||||+|||||||||||||||+|||+++|+||||||||+.|+++|||||||+|+|+|++|||+|+++||||++|+|+||
T Consensus       557 LlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDG  636 (1094)
T PLN02436        557 LIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDG  636 (1094)
T ss_pred             hhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeecccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccCcchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCC----ccCCcchhhhhhhhhhhhc
Q 002480          638 IQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSN----KKNKDTSKQIYALENIEEG  713 (917)
Q Consensus       638 ~qgp~yvGTgcv~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  713 (917)
                      +|||+||||||+|||+||||++||...+.+...++||++|||+||+++++++++++.    .++.....+++++++++++
T Consensus       637 lqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  716 (1094)
T PLN02436        637 IQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEG  716 (1094)
T ss_pred             CCCccccccCceeeeeeeeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999877766678889999999999988764432221    1233455678889999999


Q ss_pred             ccccccccccCCchhHHhhhcCCcHHHHHHHhHhhCCCCCCCChhhHHHHHHHhhcccccccCccccccCeecccccchH
Q 002480          714 IEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDI  793 (917)
Q Consensus       714 ~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~p~~~~~~~~l~eai~v~sc~ye~~t~wG~evGW~y~SVTED~  793 (917)
                      ++++++|.+..++++.++++||+|++|++|++++.||.+...+++++++||+|||||+||++|+||+||||+|+|+|||+
T Consensus       717 ~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv  796 (1094)
T PLN02436        717 IEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDI  796 (1094)
T ss_pred             cccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHH
Confidence            99999999999999999999999999999999999999998899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCcEEEEEcCCCCcccccCCCCHHHHHHHhHhhhchhHHHHHhhccccccccCCCCChhHHHHhhhhhhhhh
Q 002480          794 LTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPI  873 (917)
Q Consensus       794 ~tg~rLh~~GWrsvY~~p~~~Af~G~aPetl~a~lkQR~RWA~G~lQillsr~~PL~~g~~~~Lt~~QRL~Yl~~~lypl  873 (917)
                      .||++||++|||++|++|+++||.|+||+|+.+++.||+|||+|++||++++++|+|+++.++|+|+|||+|+++++||+
T Consensus       797 ~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l  876 (1094)
T PLN02436        797 LTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPW  876 (1094)
T ss_pred             HHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999889999999999999999999999999999999999988778999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCccccchhhHHHHHHHHHHHhh
Q 002480          874 TSIPLIAYCTLPAICLLTGKFIVPEVISDCISFSISDCISF  914 (917)
Q Consensus       874 ~sl~~liy~llP~l~LltG~~iip~~s~~~~~~~i~~~~~~  914 (917)
                      ++++.++|+++|++|||+|++|||+++..++.+|+.+++++
T Consensus       877 ~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~  917 (1094)
T PLN02436        877 TSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISI  917 (1094)
T ss_pred             HHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHH
Confidence            99999999999999999999999999999888887777654

>PLN02400 cellulose synthase	Back alignment and domain information

>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>PLN02189 cellulose synthase	Back alignment and domain information

>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>PLN02195 cellulose synthase A	Back alignment and domain information

>PLN02248 cellulose synthase-like protein	Back alignment and domain information

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals	Back alignment and domain information

>PLN02190 cellulose synthase-like protein	Back alignment and domain information

>PLN02893 Cellulose synthase-like protein	Back alignment and domain information

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A	Back alignment and domain information

>PRK05454 glucosyltransferase MdoH; Provisional	Back alignment and domain information

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan	Back alignment and domain information

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK14583 hmsR N-glycosyltransferase; Provisional	Back alignment and domain information

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111	Back alignment and domain information

>PRK11204 N-glycosyltransferase; Provisional	Back alignment and domain information

>PRK14716 bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex	Back alignment and domain information

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily	Back alignment and domain information

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase	Back alignment and domain information

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A	Back alignment and domain information

>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin	Back alignment and domain information

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI	Back alignment and domain information

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis	Back alignment and domain information

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan	Back alignment and domain information

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2	Back alignment and domain information

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine	Back alignment and domain information

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis	Back alignment and domain information

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis	Back alignment and domain information

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	Back alignment and domain information

>PF13506 Glyco_transf_21: Glycosyl transferase family 21	Back alignment and domain information

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis	Back alignment and domain information

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans	Back alignment and domain information

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function	Back alignment and domain information

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase	Back alignment and domain information

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase	Back alignment and domain information

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine	Back alignment and domain information

>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2	Back alignment and domain information

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1	Back alignment and domain information

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase	Back alignment and domain information

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily	Back alignment and domain information

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B	Back alignment and domain information

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK10073 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation	Back alignment and domain information

>PRK10018 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	Back alignment and domain information

>TIGR01556 rhamnosyltran L-rhamnosyltransferase	Back alignment and domain information

>PRK10063 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	Back alignment and domain information

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]	Back alignment and domain information

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1	Back alignment and domain information

>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional	Back alignment and domain information

>COG1216 Predicted glycosyltransferases [General function prediction only]	Back alignment and domain information

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional	Back alignment and domain information

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	Back alignment and domain information

>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>COG5175 MOT2 Transcriptional repressor [Transcription]	Back alignment and domain information

>PF14446 Prok-RING_1: Prokaryotic RING finger family 1	Back alignment and domain information

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides	Back alignment and domain information

>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1	Back alignment and domain information

>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)

Back alignment and domain information

>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0	Back alignment and domain information

>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]	Back alignment and domain information

>smart00504 Ubox Modified RING finger domain	Back alignment and domain information

>KOG2977 consensus Glycosyltransferase [General function prediction only]	Back alignment and domain information

>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		917
1weo_A		93	Solution Structure Of Ring-Finger In The Catalytic		5e-25
4hg6_A		802	Structure Of A Cellulose Synthase - Cellulose Trans		2e-06

>pdb|1WEO|A Chain A, Solution Structure Of Ring-Finger In The Catalytic Subunit (Irx3) Of Cellulose Synthase Length = 93

Back alignment and structure

Iteration: 1

Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 49/67 (73%), Positives = 56/67 (83%) Query: 31 VKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKR 90 +K L GQ C+ICGD+I +T G+ FVACNEC FP CRPCYEYERREG Q CPQCKTRYKR Sbjct: 11 LKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 Query: 91 IKGSPRV 97 ++GSPRV Sbjct: 71 LRGSPRV 77

PyMOL of 1weo

>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		917
1weo_A		93	Cellulose synthase, catalytic subunit (IRX3); stru	5e-40
1e4u_A		78	Transcriptional repressor NOT4; gene regulation, t	3e-08

>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93	Back alignment and structure

 Score =  141 bits (357), Expect = 5e-40
 Identities = 55/83 (66%), Positives = 66/83 (79%)

Query: 30  SVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYK 89
            +K L GQ C+ICGD+I +T  G+ FVACNEC FP CRPCYEYERREG Q CPQCKTRYK
Sbjct: 10  PLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69

Query: 90  RIKGSPRVDGDEEEDDTDDLENE 112
           R++GSPRV+GDE+E+D D   + 
Sbjct: 70  RLRGSPRVEGDEDEEDIDSGPSS 92

PyMOL of 1weo

>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Length = 78	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		917
d1weoa_		93	g.44.1.1 (A:) Cellulose synthase A catalytic subun	2e-46
d1g25a_		65	g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapi	6e-04

>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93	Back information, alignment and structure


class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: Cellulose synthase A catalytic subunit 7, IRX3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  158 bits (401), Expect = 2e-46
 Identities = 55/79 (69%), Positives = 65/79 (82%)

Query: 30  SVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYK 89
            +K L GQ C+ICGD+I +T  G+ FVACNEC FP CRPCYEYERREG Q CPQCKTRYK
Sbjct: 10  PLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69

Query: 90  RIKGSPRVDGDEEEDDTDD 108
           R++GSPRV+GDE+E+D D 
Sbjct: 70  RLRGSPRVEGDEDEEDIDS 88

PyMOL of d1weoa_

>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 65	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		917
d1weoa_		93	Cellulose synthase A catalytic subunit 7, IRX3 {Th	100.0
d1xhba2		328	Polypeptide N-acetylgalactosaminyltransferase 1, N	99.58
d1qg8a_		255	Spore coat polysaccharide biosynthesis protein Sps	99.17
d1omza_		265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	98.6
d1ur6b_		52	Not-4 N-terminal RING finger domain {Human (Homo s	94.65
d1g25a_		65	TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9	94.64
d2bo4a1		381	Mannosylglycerate synthase, MGS {Rhodothermus mari	92.69
d1vyxa_		60	IE1B protein (ORF K3), N-terminal domain {Kaposi's	92.64
d1chca_		68	Immediate early protein, IEEHV {Equine herpesvirus	88.98

>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: Cellulose synthase A catalytic subunit 7, IRX3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-43  Score=309.68  Aligned_cols=86  Identities=64%  Similarity=1.307  Sum_probs=82.4

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             65445564343488543334866434789992110579999723233788875159878888100012269988789988
Q 002480           23 DEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEE  102 (917)
Q Consensus        23 ~~~~~~~~~~~~~~~~CqiCgd~Vg~~~~Ge~FvaC~eC~FPVCRpCYeyErkeG~q~CPqCktrYkr~kGsprv~gdee  102 (917)
                      +++.++||++++++|+||||||+||+++|||+|||||||+|||||||||||||||||+|||||||||||||||||+||++
T Consensus         3 ~g~~g~kp~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~   82 (93)
T d1weoa_           3 SGSSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDED   82 (93)
T ss_dssp             CSSSSSSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCC
T ss_pred             CCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCC
T ss_conf             87779977345155220115463241789988887523698645078999985167027444872455258987778710


Q ss_pred             CCCCCC
Q ss_conf             778432
Q 002480          103 EDDTDD  108 (917)
Q Consensus       103 e~~~dd  108 (917)
                      ||++||
T Consensus        83 e~~~d~   88 (93)
T d1weoa_          83 EEDIDS   88 (93)
T ss_dssp             CCCSCC
T ss_pred             CCCCCC
T ss_conf             014346

PyMOL of d1weoa_

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}	Back information, alignment and structure

>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}	Back information, alignment and structure

>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}	Back information, alignment and structure