Citrus Sinensis ID: 002560
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 908 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SL76 | 1094 | Protein phosphatase 2C an | yes | no | 1.0 | 0.829 | 0.715 | 0.0 | |
| Q7XJ53 | 348 | Probable protein phosphat | no | no | 0.338 | 0.882 | 0.609 | 1e-109 | |
| Q8H2T0 | 399 | Probable protein phosphat | no | no | 0.334 | 0.761 | 0.501 | 3e-75 | |
| Q64595 | 762 | cGMP-dependent protein ki | yes | no | 0.458 | 0.545 | 0.262 | 2e-33 | |
| Q13237 | 762 | cGMP-dependent protein ki | yes | no | 0.458 | 0.545 | 0.262 | 3e-33 | |
| Q03042 | 768 | cGMP-dependent protein ki | yes | no | 0.452 | 0.535 | 0.262 | 1e-32 | |
| Q61410 | 762 | cGMP-dependent protein ki | yes | no | 0.458 | 0.545 | 0.260 | 2e-32 | |
| P0C605 | 671 | cGMP-dependent protein ki | no | no | 0.439 | 0.594 | 0.263 | 6e-32 | |
| O76360 | 780 | cGMP-dependent protein ki | yes | no | 0.462 | 0.538 | 0.257 | 7e-32 | |
| P13861 | 404 | cAMP-dependent protein ki | no | no | 0.310 | 0.698 | 0.298 | 8e-32 |
| >sp|Q9SL76|P2C19_ARATH Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana GN=At2g20050 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1332 bits (3446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/920 (71%), Positives = 758/920 (82%), Gaps = 12/920 (1%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASS-------SSDGPDAE 53
MGC YS+ CIG+IC ++ IR Q + T A + SSD D
Sbjct: 1 MGCAYSKTCIGQICATKENSIRQTHQQAPSRGGTRATAAAAAVEEDNPVFNFSSDAVDDV 60
Query: 54 TRDQISQL----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDA 109
D+I QL + E GITRLSRVSSQFLPP+GSR VKVPS YELR SFLSQRGYYPDA
Sbjct: 61 DNDEIHQLGLSRDQEWGITRLSRVSSQFLPPDGSRVVKVPSCNYELRCSFLSQRGYYPDA 120
Query: 110 LDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAV 169
LDKANQDSF IHTPFG++ DDHFFGVFDGHGEFGAQCSQFVKR+LCENLLR+ +F D
Sbjct: 121 LDKANQDSFAIHTPFGSNSDDHFFGVFDGHGEFGAQCSQFVKRRLCENLLRHGRFRVDPA 180
Query: 170 DACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVA 229
+AC+S++LTTNSQLHAD++DDSMSGTTA+TV+VRGRTIYVAN+GDSRAVLAE+R ++VA
Sbjct: 181 EACNSAFLTTNSQLHADLVDDSMSGTTAITVMVRGRTIYVANAGDSRAVLAEKRDGDLVA 240
Query: 230 VDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNG 289
VDLSIDQTPFR DELERVKL GARVLTLDQIEGLKNPDVQCWGTEE DDGDPPRLWVPNG
Sbjct: 241 VDLSIDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEDDDGDPPRLWVPNG 300
Query: 290 MYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVA 349
MYPGTAFTRSIGDSIAETIGVVANPEI V ELT D+PFFV+ASDGVFEF+SSQ VVDMVA
Sbjct: 301 MYPGTAFTRSIGDSIAETIGVVANPEIAVVELTPDNPFFVVASDGVFEFISSQTVVDMVA 360
Query: 350 KYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVP 409
K+KDPRDACAAIVAESYRLWLQYETRTDDIT+IVVHI+GLK+ A Q G L+ P+P
Sbjct: 361 KHKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHIDGLKDDAPRQLSSTGTQLQPPIP 420
Query: 410 QVIEVTGSESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEA 469
QV+E+TGSESPSTFGW+S+NQR+RHDLSRAR+RAIENSLENG WVP S AHRKTWEEEA
Sbjct: 421 QVVELTGSESPSTFGWNSKNQRVRHDLSRARIRAIENSLENGHAWVPPSPAHRKTWEEEA 480
Query: 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMA 529
HIER L DHFLFRKLTDSQC VLLDCMQR+E GDIVVKQGGEGDCFYVVGSGEFEV+A
Sbjct: 481 HIERVLRDHFLFRKLTDSQCQVLLDCMQRLEANPGDIVVKQGGEGDCFYVVGSGEFEVLA 540
Query: 530 TQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILM 589
TQ+ KNGEVPR+LQRYTAEK SSFGELALM+NKPLQASVRAV +G LWALKREDFRGILM
Sbjct: 541 TQDGKNGEVPRILQRYTAEKQSSFGELALMHNKPLQASVRAVDHGTLWALKREDFRGILM 600
Query: 590 SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRG 649
SEFSNL+SLKLLRSVDLLSRLTILQLSH+A++LSE FS GQTIV ++ + LY+IQ+G
Sbjct: 601 SEFSNLASLKLLRSVDLLSRLTILQLSHVAESLSEACFSDGQTIVTKDQKLQGLYVIQKG 660
Query: 650 QVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLT 709
+V+I+F ++L + NV SL + + E D + E+S+EK EGSYFGEW LLGE SL+
Sbjct: 661 RVKISFCTEVLESQNVSSLTTGITNEYDNLEIGTEVSIEKHEGSYFGEWALLGELKDSLS 720
Query: 710 AVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLT 769
VAV +VVC +LTKE F+ VGPLT IS D ++ S ++ K+ AK D ++LAK +L
Sbjct: 721 VVAVGEVVCVVLTKENFESAVGPLTNISDDGPKTRHSSFELSKESAKVTDTTALAKATLA 780
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV-SP 828
D+EW CL +TDCSEIGLV L+D EN LSLKRFSKQKVK LGKE QVLKE+NLMK+V P
Sbjct: 781 DLEWTTCLSTTDCSEIGLVHLKDKENLLSLKRFSKQKVKKLGKEAQVLKERNLMKNVIKP 840
Query: 829 SACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRG 888
SA VP+ILCTC D A +LLNT LACP++S+LH+PLDE S RF S+V+A+ED+HK
Sbjct: 841 SAIVPEILCTCVDQTFAAILLNTTLACPISSLLHSPLDESSVRFITGSLVSAIEDIHKNE 900
Query: 889 VLYRGVSPDVLMLDKSGHLQ 908
+L+RG SP++LMLD+SG+LQ
Sbjct: 901 ILFRGSSPELLMLDQSGYLQ 920
|
Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6 |
| >sp|Q7XJ53|P2C35_ARATH Probable protein phosphatase 2C 35 OS=Arabidopsis thaliana GN=At3g06270 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/307 (60%), Positives = 230/307 (74%)
Query: 85 TVKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGA 144
++ VPS +++ YS LSQRGYYPD+ DK NQD++CI T + + HFFGVFDGHG G
Sbjct: 41 SIHVPSPNFDMVYSVLSQRGYYPDSPDKENQDTYCIKTELQGNPNVHFFGVFDGHGVLGT 100
Query: 145 QCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRG 204
QCS FVK ++ E L + ED A S++L N +LH +DDSMSGTTA+TVLV G
Sbjct: 101 QCSNFVKERVVEMLSEDPTLLEDPEKAYKSAFLRVNEELHDSEIDDSMSGTTAITVLVVG 160
Query: 205 RTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLK 264
IYVAN GDSRAVLA + I+A DLS DQTPFR+DE ERVK GARVL++DQ+EGLK
Sbjct: 161 DKIYVANVGDSRAVLAVKDRNRILAEDLSYDQTPFRKDECERVKACGARVLSVDQVEGLK 220
Query: 265 NPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTND 324
+P++Q W EE + GDPPRLWV NGMYPGTAFTRS+GD AE+IGV+A PE+ + L+ +
Sbjct: 221 DPNIQTWANEESEGGDPPRLWVQNGMYPGTAFTRSVGDFTAESIGVIAEPEVSMVHLSPN 280
Query: 325 HPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVV 384
H FFV+ASDG+FEFL SQAVVDMV +Y DPRD CAA AESY+LWL++E RTDDIT+I+V
Sbjct: 281 HLFFVVASDGIFEFLPSQAVVDMVGRYADPRDGCAAAAAESYKLWLEHENRTDDITIIIV 340
Query: 385 HINGLKN 391
I L N
Sbjct: 341 QIKKLSN 347
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q8H2T0|P2C65_ORYSJ Probable protein phosphatase 2C 65 OS=Oryza sativa subsp. japonica GN=Os07g0646100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/319 (50%), Positives = 207/319 (64%), Gaps = 15/319 (4%)
Query: 86 VKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQ 145
V VP A L Y+ L+ G YPD+ + +QD+ + T F D H F VFDGHG GA
Sbjct: 34 VAVPGAGLVLEYATLAVAGLYPDSPGRESQDAHLVATRFAGHPDLHLFAVFDGHGACGAA 93
Query: 146 CSQFVKRKLCENLLRNNKFH-----------EDAVDACHSSYLTTNSQLHA-DVLDDSMS 193
C+ F + L L ED A + N+++HA D +DDSMS
Sbjct: 94 CAGFARDALPRLLAGVGVGAGEEGGGRMVVVEDPAAAFREALPAANAEMHAADEVDDSMS 153
Query: 194 GTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGAR 253
GTTAV LV G ++VAN GDSRAV R + A +LS DQTPFR DE RVK GAR
Sbjct: 154 GTTAVAALVAGGALHVANVGDSRAVAGVWREGRVAAEELSWDQTPFRADERARVKACGAR 213
Query: 254 VLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVAN 313
V++++Q+EG+++P+ + W D+GDPPR+W +G+YPGTAFTRS+GD AE +GV+A
Sbjct: 214 VMSVEQVEGVRDPEAESW---VADEGDPPRVWARDGLYPGTAFTRSLGDQAAEAVGVIAE 270
Query: 314 PEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYE 373
PE+ E+T H FFV+ASDGVFEFLSSQ VVDMVA Y+DPR+AC+AI AESY+LWL++E
Sbjct: 271 PEVKSVEITPAHLFFVVASDGVFEFLSSQDVVDMVAAYEDPREACSAIAAESYKLWLEHE 330
Query: 374 TRTDDITVIVVHINGLKNT 392
RTDDIT+I+VHI +N
Sbjct: 331 NRTDDITIIIVHIRDSENV 349
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Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q64595|KGP2_RAT cGMP-dependent protein kinase 2 OS=Rattus norvegicus GN=Prkg2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 216/473 (45%), Gaps = 57/473 (12%)
Query: 462 RKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVG 521
RK E+ I AL+ + ++L Q +++CM Q G +VKQG G+ +V+
Sbjct: 150 RKDSSEKKLITDALNKNQFLKRLDPQQIKDMVECMYGRNYQQGSYIVKQGEPGNHIFVLA 209
Query: 522 SGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKR 581
G EV E+ +P ++FGELA++YN ASV+A+TN WAL R
Sbjct: 210 EGRLEVFQG-EKLLSSIPM---------WTTFGELAILYNCTRTASVKAITNVKTWALDR 259
Query: 582 EDFRGIL--MSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEG 639
E F+ I+ ++ + LRSV LL L +L+ + D L + G I+ E
Sbjct: 260 EVFQNIMRRTAQARDEEYRNFLRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEE 319
Query: 640 VAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWT 699
+ +I+ +G+V++T + D Q K L +G YFGE
Sbjct: 320 GSTFFILAKGKVKVTQSTE----------------GHDQPQLIKTLQ----KGEYFGEKA 359
Query: 700 LLGEHMGSLTAVAVD-DVVCAILTKEKFDLVVGPLTKI-----------SHDDQNSKDYS 747
L+ + + S +A + DV C ++ +E F+ VG ++ + DD+
Sbjct: 360 LISDDVRSANIIAEENDVACLVIDRETFNQTVGTFDELQKYLEGYVATLNRDDEKRHAKR 419
Query: 748 SDIPKKPAKSIDIS------SLAKVSLT----DMEWRKCLYSTDCSEIGLVLLRDSENFL 797
S K +K++ + +A+ S T ++E L + LV +++
Sbjct: 420 SMSSWKLSKALSLEMIQLKEKVARFSSTSPFQNLEIIATLGVGGFGRVELVKVKNENIAF 479
Query: 798 SLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPL 857
++K K+ + ++ V EK +++ + S + ++ T D+ + +LL L L
Sbjct: 480 AMKCIRKKHIVDTKQQEHVYSEKRILEELC-SPFIVKLYRTFKDNKYVYMLLEACLGGEL 538
Query: 858 ASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
SIL DE +++FC A V A + LH+ G++YR + P+ L+LD G+L+
Sbjct: 539 WSILRDRGSFDEPTSKFCVACVTEAFDYLHRLGIIYRDLKPENLILDADGYLK 591
|
Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: 2 |
| >sp|Q13237|KGP2_HUMAN cGMP-dependent protein kinase 2 OS=Homo sapiens GN=PRKG2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 218/473 (46%), Gaps = 57/473 (12%)
Query: 462 RKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVG 521
RK E+ I AL+ + ++L Q +++CM Q G ++KQG G+ +V+
Sbjct: 150 RKDSSEKKLITDALNKNQFLKRLDPQQIKDMVECMYGRNYQQGSYIIKQGEPGNHIFVLA 209
Query: 522 SGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKR 581
G EV E+ +P ++FGELA++YN ASV+A+TN WAL R
Sbjct: 210 EGRLEVFQG-EKLLSSIPM---------WTTFGELAILYNCTRTASVKAITNVKTWALDR 259
Query: 582 EDFRGIL--MSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEG 639
E F+ I+ ++ + LRSV LL L +L+ + D L + G I+ E
Sbjct: 260 EVFQNIMRRTAQARDEQYRNFLRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEE 319
Query: 640 VAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWT 699
+ +I+ +G+V++T + D Q K L +G YFGE
Sbjct: 320 GSTFFILAKGKVKVTQSTE----------------GHDQPQLIKTLQ----KGEYFGEKA 359
Query: 700 LLGEHMGSLTAVAVD-DVVCAILTKEKFDLVVGPLTKI-----------SHDDQ--NSKD 745
L+ + + S +A + DV C ++ +E F+ VG ++ + DD+ ++K
Sbjct: 360 LISDDVRSANIIAEENDVACLVIDRETFNQTVGTFEELQKYLEGYVANLNRDDEKRHAKR 419
Query: 746 YSSDIPKKPAKSIDISSL----AKVS----LTDMEWRKCLYSTDCSEIGLVLLRDSENFL 797
S+ A S+++ L A+ S ++E L + LV +++
Sbjct: 420 SMSNWKLSKALSLEMIQLKEKVARFSSSSPFQNLEIIATLGVGGFGRVELVKVKNENVAF 479
Query: 798 SLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPL 857
++K K+ + ++ V EK +++ + S + ++ T D+ + +LL L L
Sbjct: 480 AMKCIRKKHIVDTKQQEHVYSEKRILEELC-SPFIVKLYRTFKDNKYVYMLLEACLGGEL 538
Query: 858 ASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
SIL DE +++FC A V A + LH+ G++YR + P+ L+LD G+L+
Sbjct: 539 WSILRDRGSFDEPTSKFCVACVTEAFDYLHRLGIIYRDLKPENLILDAEGYLK 591
|
Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: 2 |
| >sp|Q03042|KGP1_DROME cGMP-dependent protein kinase, isozyme 1 OS=Drosophila melanogaster GN=Pkg21D PE=1 SV=2 | Back alignment and function description |
|---|
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 219/469 (46%), Gaps = 58/469 (12%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
+ K + ++ I+ A+ D+ + + SQ L+D M + AG+ V+++G G YV
Sbjct: 166 YEKDFSDKQQIKDAIMDNDFLKNIDASQVRELVDSMYSKSIAAGEFVIREGEVGAHLYVS 225
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGM-LWAL 579
+GEF VM + +VL + A K +FGELA++YN AS+R ++ +W L
Sbjct: 226 AAGEFAVM--------QQGKVLDKMGAGK--AFGELAILYNCTRTASIRVLSEAARVWVL 275
Query: 580 KREDFRGILM-SEFSNL-SSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMN 637
R F+ I+M + + +S+ LRSV LL L+ L+ +AD L ++AG I+
Sbjct: 276 DRRVFQQIMMCTGLQRIENSVNFLRSVPLLMNLSEELLAKIADVLELEFYAAGTYIIRQG 335
Query: 638 EGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEK--SEGSYF 695
+ ++I +G VR+T T +S E + + S G YF
Sbjct: 336 TAGDSFFLISQGNVRVT---------------------QKLTPTSPEETELRTLSRGDYF 374
Query: 696 GEWTLLGEHMGSLTAVAVD-DVVCAILTKEKFDLVVGPLTKISHDD----------QNSK 744
GE L+ E + +A+ V C L ++ F ++G L ++ D + ++
Sbjct: 375 GEQALINEDKRTANIIALSPGVECLTLDRDSFKRLIGDLCELKEKDYGDESRKLAMKQAQ 434
Query: 745 DYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLL--RDSENFLSLKRF 802
+ D PK+ + + LTD+E L + LV +D + +LK
Sbjct: 435 ESCRDEPKEQLQQ----EFPDLKLTDLEVVSTLGIGGFGRVELVKAHHQDRVDIFALKCL 490
Query: 803 SKQKVKCLGKEVQVLKEKNLM-KSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL 861
K+ + +E + E+++M S SP C ++ T D + +LL + + ++L
Sbjct: 491 KKRHIVDTKQEEHIFSERHIMLSSRSPFIC--RLYRTFRDEKYVYMLLEACMGGEIWTML 548
Query: 862 HT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
++ +A+F V+ A E LH RG++YR + P+ LMLD+ G+++
Sbjct: 549 RDRGSFEDNAAQFIIGCVLQAFEYLHARGIIYRDLKPENLMLDERGYVK 597
|
Drosophila melanogaster (taxid: 7227) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: 2 |
| >sp|Q61410|KGP2_MOUSE cGMP-dependent protein kinase 2 OS=Mus musculus GN=Prkg2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 216/473 (45%), Gaps = 57/473 (12%)
Query: 462 RKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVG 521
RK E+ I AL+ + ++L Q +++CM ++ G V+KQG G+ +V+
Sbjct: 150 RKDSSEKKLITDALNKNQFLKRLDPQQIKDMVECMYGEKLSTGSYVIKQGEPGNHIFVLA 209
Query: 522 SGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKR 581
G EV E+ +P ++FGELA++YN ASV+A+TN WAL R
Sbjct: 210 EGRLEVFQG-EKLLSSIPM---------WTTFGELAILYNCTRTASVKAITNVKTWALDR 259
Query: 582 EDFRGIL--MSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEG 639
E F+ I+ ++ + LRSV LL L +L+ + D L + G I+ E
Sbjct: 260 EVFQNIMRRTAQARDEEYRNFLRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEE 319
Query: 640 VAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWT 699
+ +I+ +G+V++T + D Q K L +G YFGE
Sbjct: 320 GSTFFILAKGKVKVTQSTE----------------GHDQPQLIKTL----QKGEYFGEKA 359
Query: 700 LLGEHMGSLTAVAVD-DVVCAILTKEKFDLVVGPLTK-----------ISHDDQNSKDYS 747
L+ + + S +A + DV C ++ +E F+ VG + ++ DD+
Sbjct: 360 LISDDVRSANIIAEENDVACLVIDRETFNQTVGTFDELQKYLEGYVATLNRDDEKRHAKR 419
Query: 748 SDIPKKPAKSIDI------SSLAKVSLT----DMEWRKCLYSTDCSEIGLVLLRDSENFL 797
S K +K++ + +A+ S T ++E L + LV +++
Sbjct: 420 SMSSWKLSKALSLEMIQLKEKVARFSSTSPFQNLEIIATLGVGGFGRVELVKVKNENVAF 479
Query: 798 SLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPL 857
++K K+ + ++ V EK +++ + S + ++ T D+ + +LL L L
Sbjct: 480 AMKCIRKKHIVDTKQQEHVYSEKRILEELC-SPFIVKLYRTFKDNKYVYMLLEACLGGEL 538
Query: 858 ASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
SIL DE +++FC A V A + LH G++YR + P+ L+LD G+L+
Sbjct: 539 WSILRDRGSFDEPTSKFCVACVTEAFDYLHLLGIIYRDLKPENLILDADGYLK 591
|
Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: 2 |
| >sp|P0C605|KGP1_MOUSE cGMP-dependent protein kinase 1 OS=Mus musculus GN=Prkg1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 196/441 (44%), Gaps = 42/441 (9%)
Query: 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMAT 530
I+ A+ D+ + L SQ ++DCM VE ++K+G G YV+ G+ EV
Sbjct: 94 IKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVT-- 151
Query: 531 QEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
K G ++ T FGELA++YN A+V+ + N LWA+ R+ F+ I+M
Sbjct: 152 ---KEG-----VKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMR 203
Query: 591 E--FSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQR 648
+ ++ L+SV L LS LAD L E + G+ I+ +II +
Sbjct: 204 TGLIKHTEYMEFLKSVPTFQSLPDEILSKLADVLEETHYENGEYIIRQGARGDTFFIISK 263
Query: 649 GQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSL 708
GQV +T +D +G +FGE L GE + +
Sbjct: 264 GQVNVT--------------------REDSPSEDPVFLRTLGKGDWFGEKALQGEDVRTA 303
Query: 709 TAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSL 768
+A + V C ++ ++ F ++G L DD ++K Y D K + + A + L
Sbjct: 304 NVIAAEAVTCLVIDRDSFKHLIGGL-----DDVSNKAY-EDAEAKAKYEAEAAFFANLKL 357
Query: 769 TDMEWRKCLYSTDCSEIGLVLLRDSEN-FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
+D L + LV L+ E+ ++K K+ + ++ + EK +M+
Sbjct: 358 SDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAH 417
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
S + ++ T DS + +L+ L L +IL ++ + RF A VV A LH
Sbjct: 418 -SDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLH 476
Query: 886 KRGVLYRGVSPDVLMLDKSGH 906
+G++YR + P+ L+LD G+
Sbjct: 477 SKGIIYRDLKPENLILDHRGY 497
|
Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: 2 |
| >sp|O76360|EGL4_CAEEL cGMP-dependent protein kinase egl-4 OS=Caenorhabditis elegans GN=egl-4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 211/466 (45%), Gaps = 46/466 (9%)
Query: 456 PSSSAH-RKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEG 514
P++ H KT + I A+ + ++L Q L++CM + +AG V+++G G
Sbjct: 176 PATLQHYNKTVGAKQMIRDAVQKNDFLKQLAKEQIIELVNCMYEMRARAGQWVIQEGEPG 235
Query: 515 DCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNG 574
D +VV GE +V + G + ++ T GELA++YN ASV+A+T+
Sbjct: 236 DRLFVVAEGELQV-----SREGALLGKMRAGTV-----MGELAILYNCTRTASVQALTDV 285
Query: 575 MLWALKREDFRGIL----MSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAG 630
LW L R F+ I M S L + L V + L+ ++S +AD + + + G
Sbjct: 286 QLWVLDRSVFQMITQRLGMERHSQL--MNFLTKVSIFQNLSEDRISKMADVMDQDYYDGG 343
Query: 631 QTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKS 690
I+ E A ++I GQV++T + +G +E+ V +
Sbjct: 344 HYIIRQGEKGDAFFVINSGQVKVT-------------------QQIEGETEPREIRV-LN 383
Query: 691 EGSYFGEWTLLGEHMGSLTAVA-VDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSD 749
+G +FGE LLGE + + +A V L +E F ++G L + D + + +
Sbjct: 384 QGDFFGERALLGEEVRTANIIAQAPGVEVLTLDRESFGKLIGDLESLKKDYGDKERLAQV 443
Query: 750 I--PKKPAKSID--ISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLR-DSENFLSLKRFSK 804
+ P P K +D A+V+L +++ L + LV + D +LK K
Sbjct: 444 VREPPSPVKIVDDFREEFAQVTLKNVKRLATLGVGGFGRVELVCVNGDKAKTFALKALKK 503
Query: 805 QKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP 864
+ + ++ + E+N+M S V ++ T D +LL L L + L
Sbjct: 504 KHIVDTRQQEHIFAERNIMMETSTDWIV-KLYKTFRDQKFVYMLLEVCLGGELWTTLRDR 562
Query: 865 --LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
D+ +ARF A V+ LE LH++ ++YR + P+ +L +G+L+
Sbjct: 563 GHFDDYTARFYVACVLEGLEYLHRKNIVYRDLKPENCLLANTGYLK 608
|
Promotes chemoreceptor gene expression in response to increased cGMP levels by antagonizing the gene repression functions of the class II HDAC hda-4 and the mef-2 transcription factor. Represses body size and lifespan through the dbl-1 and insulin pathways, respectively. May also signal through daf-3 and/or daf-5. Role in egg-laying and dauer formation. Caenorhabditis elegans (taxid: 6239) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: 2 |
| >sp|P13861|KAP2_HUMAN cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Homo sapiens GN=PRKAR2A PE=1 SV=2 | Back alignment and function description |
|---|
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 26/308 (8%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT E+ ++ A D LF+ L Q +LD M V+A + V+ QG +GD FYV+
Sbjct: 120 HPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVKADEHVIDQGDDGDNFYVI 179
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G ++++ T++ + V + R SFGELALMYN P A++ A + G LW L
Sbjct: 180 ERGTYDILVTKDNQTRSVGQYDNR------GSFGELALMYNTPRAATIVATSEGSLWGLD 233
Query: 581 REDFRGILMSEFSNLSSL--KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNE 638
R FR I++ + + + SV LL L + + + D + E + G+ I+ E
Sbjct: 234 RVTFRRIIVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKDGERIITQGE 293
Query: 639 GVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEK-SEGSYFGE 697
+ YII+ G+V I + SN +D G Q E+ + + +G YFGE
Sbjct: 294 KADSFYIIESGEVSILIRSRTKSN------------KDGGNQ---EVEIARCHKGQYFGE 338
Query: 698 WTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKS 757
L+ + +A AV DV C ++ + F+ ++GP I +N Y + K S
Sbjct: 339 LALVTNKPRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMK--RNISHYEEQLVKMFGSS 396
Query: 758 IDISSLAK 765
+D+ +L +
Sbjct: 397 VDLGNLGQ 404
|
Regulatory subunit of the cAMP-dependent protein kinases involved in cAMP signaling in cells. Type II regulatory chains mediate membrane association by binding to anchoring proteins, including the MAP2 kinase. Homo sapiens (taxid: 9606) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 908 | ||||||
| 297738781 | 1083 | unnamed protein product [Vitis vinifera] | 0.992 | 0.831 | 0.810 | 0.0 | |
| 359484557 | 1073 | PREDICTED: protein phosphatase 2C and cy | 0.985 | 0.834 | 0.811 | 0.0 | |
| 255546387 | 1077 | protein phosphatase 2c, putative [Ricinu | 0.986 | 0.831 | 0.797 | 0.0 | |
| 356495224 | 1074 | PREDICTED: protein phosphatase 2C and cy | 0.985 | 0.833 | 0.780 | 0.0 | |
| 356529640 | 1074 | PREDICTED: protein phosphatase 2C and cy | 0.982 | 0.830 | 0.772 | 0.0 | |
| 449527276 | 1082 | PREDICTED: LOW QUALITY PROTEIN: protein | 0.992 | 0.832 | 0.766 | 0.0 | |
| 167989427 | 1083 | putative cyclic nucleotide-dependent hyb | 0.993 | 0.832 | 0.754 | 0.0 | |
| 449467106 | 1082 | PREDICTED: protein phosphatase 2C and cy | 0.992 | 0.832 | 0.765 | 0.0 | |
| 240254485 | 1094 | protein phosphatase 2C and cyclic nucleo | 1.0 | 0.829 | 0.715 | 0.0 | |
| 297832136 | 1093 | hypothetical protein ARALYDRAFT_480465 [ | 0.994 | 0.826 | 0.716 | 0.0 |
| >gi|297738781|emb|CBI28026.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1523 bits (3942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 742/916 (81%), Positives = 811/916 (88%), Gaps = 15/916 (1%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQ 60
MGCVYSR+CIGE+CTPR AR++ E +R E+ VFSPASS DG D E RDQ++Q
Sbjct: 1 MGCVYSRSCIGEVCTPRHARVKETE----NARAGAELPVFSPASS--DGEDGEIRDQLNQ 54
Query: 61 L----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQD 116
L + E+GITRLSRVSSQFLP +GSRTVK+PS YELR+SFLSQRGYYPDALDKANQD
Sbjct: 55 LSLTRDSEVGITRLSRVSSQFLPHDGSRTVKIPSGNYELRFSFLSQRGYYPDALDKANQD 114
Query: 117 SFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSY 176
SFCIHTP GT+ DDHFFGVFDGHGEFGAQCSQFVK+KLCENLLRN++FH DA++ACH+++
Sbjct: 115 SFCIHTPLGTNPDDHFFGVFDGHGEFGAQCSQFVKQKLCENLLRNSRFHMDAIEACHAAF 174
Query: 177 LTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQ 236
LTTNSQLHAD LDDSMSGTTA+TVLVRGRTIYVANSGDSRAV+AER+GKEIVAVDLSIDQ
Sbjct: 175 LTTNSQLHADSLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERKGKEIVAVDLSIDQ 234
Query: 237 TPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAF 296
TPFR DELERVKL GARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAF
Sbjct: 235 TPFRADELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAF 294
Query: 297 TRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRD 356
TRSIGDSIAE+IGVVANPEIVV ELT DHPFFVLASDGVFEFLSSQ VVDMV K+KDPRD
Sbjct: 295 TRSIGDSIAESIGVVANPEIVVLELTPDHPFFVLASDGVFEFLSSQTVVDMVTKFKDPRD 354
Query: 357 ACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQVIEVTG 416
ACAAIVAESYRLWLQYETRTDDITVIVVHINGL + V QS PG R PVPQV+EVTG
Sbjct: 355 ACAAIVAESYRLWLQYETRTDDITVIVVHINGLTDPDVGQSANPGAISRPPVPQVVEVTG 414
Query: 417 SESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERALH 476
SESPST W+SRN R+RHDLSRARLRAIE+SLENGQIWVP S AHRKTWEEEAHIERALH
Sbjct: 415 SESPSTLSWNSRNHRVRHDLSRARLRAIESSLENGQIWVPPSPAHRKTWEEEAHIERALH 474
Query: 477 DHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNG 536
DHFLFRKLTDSQCHVLLDCMQRVEVQ+GD+VVKQGGEGDCFYVVGSGEFEV+ATQEEKNG
Sbjct: 475 DHFLFRKLTDSQCHVLLDCMQRVEVQSGDVVVKQGGEGDCFYVVGSGEFEVLATQEEKNG 534
Query: 537 EVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596
EV RVLQ+YTAEKLSSFGELALMYNKPLQASVRAVTNG LWALKREDFRGILMSEFSNLS
Sbjct: 535 EVTRVLQQYTAEKLSSFGELALMYNKPLQASVRAVTNGTLWALKREDFRGILMSEFSNLS 594
Query: 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFD 656
SLKLLRSVDLLSRLTILQLSH+AD+LSEVSFS GQTIV+ NEG ALYIIQ+GQVRITFD
Sbjct: 595 SLKLLRSVDLLSRLTILQLSHIADSLSEVSFSDGQTIVDKNEGPVALYIIQKGQVRITFD 654
Query: 657 ADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDV 716
D + + + SL SD +DD T+SS E V K+EGSYFGEW LLGE++GS +AVA+ DV
Sbjct: 655 PDSIRSPSFGSLVSDNQKQDDDTESSTEFVV-KTEGSYFGEWALLGENIGSFSAVAMGDV 713
Query: 717 VCAILTKEKFDLVVGPLTKISHDDQ----NSKDYSSDIPKKPAKSIDISSLAKVSLTDME 772
VCA+LTKEKFD VVGPL K+S D+ +S+DYSS +PK+ K+ID S+L KV +D+E
Sbjct: 714 VCAVLTKEKFDAVVGPLAKLSQGDEKSRDHSRDYSSSLPKESVKNIDPSTLTKVQPSDLE 773
Query: 773 WRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACV 832
WR CLYSTDCSEIGLVLLRDSEN LSLKRFSKQK+K LGKE QVLKEKNLM S++PSACV
Sbjct: 774 WRTCLYSTDCSEIGLVLLRDSENLLSLKRFSKQKIKRLGKEAQVLKEKNLMMSMAPSACV 833
Query: 833 PQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYR 892
PQ+LCT AD HA +LLNT LACP ASILHTPLDE SARFCAASVV ALE+LHK G+LYR
Sbjct: 834 PQVLCTIADQNHASILLNTCLACPFASILHTPLDEPSARFCAASVVIALENLHKNGILYR 893
Query: 893 GVSPDVLMLDKSGHLQ 908
GVSPDVLM D +GHLQ
Sbjct: 894 GVSPDVLMFDHTGHLQ 909
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484557|ref|XP_002280650.2| PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1519 bits (3933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 740/912 (81%), Positives = 807/912 (88%), Gaps = 17/912 (1%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQ 60
MGCVYSR+CIGE+CTPR AR++ E +R E+ VFSPASS DG D E RDQ++Q
Sbjct: 1 MGCVYSRSCIGEVCTPRHARVKETE----NARAGAELPVFSPASS--DGEDGEIRDQLNQ 54
Query: 61 L----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQD 116
L + E+GITRLSRVSSQFLP +GSRTVK+PS YELR+SFLSQRGYYPDALDKANQD
Sbjct: 55 LSLTRDSEVGITRLSRVSSQFLPHDGSRTVKIPSGNYELRFSFLSQRGYYPDALDKANQD 114
Query: 117 SFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSY 176
SFCIHTP GT+ DDHFFGVFDGHGEFGAQCSQFVK+KLCENLLRN++FH DA++ACH+++
Sbjct: 115 SFCIHTPLGTNPDDHFFGVFDGHGEFGAQCSQFVKQKLCENLLRNSRFHMDAIEACHAAF 174
Query: 177 LTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQ 236
LTTNSQLHAD LDDSMSGTTA+TVLVRGRTIYVANSGDSRAV+AER+GKEIVAVDLSIDQ
Sbjct: 175 LTTNSQLHADSLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERKGKEIVAVDLSIDQ 234
Query: 237 TPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAF 296
TPFR DELERVKL GARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAF
Sbjct: 235 TPFRADELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAF 294
Query: 297 TRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRD 356
TRSIGDSIAE+IGVVANPEIVV ELT DHPFFVLASDGVFEFLSSQ VVDMV K+KDPRD
Sbjct: 295 TRSIGDSIAESIGVVANPEIVVLELTPDHPFFVLASDGVFEFLSSQTVVDMVTKFKDPRD 354
Query: 357 ACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQVIEVTG 416
ACAAIVAESYRLWLQYETRTDDITVIVVHINGL + V QS PG R PVPQV+EVTG
Sbjct: 355 ACAAIVAESYRLWLQYETRTDDITVIVVHINGLTDPDVGQSANPGAISRPPVPQVVEVTG 414
Query: 417 SESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERALH 476
SESPST W+SRN R+RHDLSRARLRAIE+SLENGQIWVP S AHRKTWEEEAHIERALH
Sbjct: 415 SESPSTLSWNSRNHRVRHDLSRARLRAIESSLENGQIWVPPSPAHRKTWEEEAHIERALH 474
Query: 477 DHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNG 536
DHFLFRKLTDSQCHVLLDCMQRVEVQ+GD+VVKQGGEGDCFYVVGSGEFEV+ATQEEKNG
Sbjct: 475 DHFLFRKLTDSQCHVLLDCMQRVEVQSGDVVVKQGGEGDCFYVVGSGEFEVLATQEEKNG 534
Query: 537 EVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596
EV RVLQ+YTAEKLSSFGELALMYNKPLQASVRAVTNG LWALKREDFRGILMSEFSNLS
Sbjct: 535 EVTRVLQQYTAEKLSSFGELALMYNKPLQASVRAVTNGTLWALKREDFRGILMSEFSNLS 594
Query: 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFD 656
SLKLLRSVDLLSRLTILQLSH+AD+LSEVSFS GQTIV+ NEG ALYIIQ+GQVRITFD
Sbjct: 595 SLKLLRSVDLLSRLTILQLSHIADSLSEVSFSDGQTIVDKNEGPVALYIIQKGQVRITFD 654
Query: 657 ADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDV 716
D + + + SL SD +DD T+SS E V K+EGSYFGEW LLGE++GS +AVA+ DV
Sbjct: 655 PDSIRSPSFGSLVSDNQKQDDDTESSTEFVV-KTEGSYFGEWALLGENIGSFSAVAMGDV 713
Query: 717 VCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKC 776
VCA+LTKEKFD VVGPL K+ S+DYSS +PK+ K+ID S+L KV +D+EWR C
Sbjct: 714 VCAVLTKEKFDAVVGPLAKL------SQDYSSSLPKESVKNIDPSTLTKVQPSDLEWRTC 767
Query: 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQIL 836
LYSTDCSEIGLVLLRDSEN LSLKRFSKQK+K LGKE QVLKEKNLM S++PSACVPQ+L
Sbjct: 768 LYSTDCSEIGLVLLRDSENLLSLKRFSKQKIKRLGKEAQVLKEKNLMMSMAPSACVPQVL 827
Query: 837 CTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSP 896
CT AD HA +LLNT LACP ASILHTPLDE SARFCAASVV ALE+LHK G+LYRGVSP
Sbjct: 828 CTIADQNHASILLNTCLACPFASILHTPLDEPSARFCAASVVIALENLHKNGILYRGVSP 887
Query: 897 DVLMLDKSGHLQ 908
DVLM D +GHLQ
Sbjct: 888 DVLMFDHTGHLQ 899
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546387|ref|XP_002514253.1| protein phosphatase 2c, putative [Ricinus communis] gi|223546709|gb|EEF48207.1| protein phosphatase 2c, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1507 bits (3902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 730/915 (79%), Positives = 811/915 (88%), Gaps = 19/915 (2%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQ 60
MGCVYSRACIGE+C PRD RI+ + QT ++ E+ VFSPA++S P++ETRDQI+Q
Sbjct: 1 MGCVYSRACIGEVCVPRDPRIKQQNQVQTITQNATELPVFSPATTS---PESETRDQINQ 57
Query: 61 L----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQD 116
+ +PELGITRLSRVSSQ+LPP+GSRTVKVPSA YELRYS+LSQRGYYPDALDKANQD
Sbjct: 58 ISLNRDPELGITRLSRVSSQYLPPDGSRTVKVPSANYELRYSYLSQRGYYPDALDKANQD 117
Query: 117 SFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSY 176
SFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN+KF+ DAV+A S++
Sbjct: 118 SFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSKFNLDAVEAHQSAF 177
Query: 177 LTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGK--EIVAVDLSI 234
L TN QLHAD LDDSMSGTTA+TVLVRGRTIYVANSGDSRAV+AE++G EI A+DLSI
Sbjct: 178 LATNCQLHADSLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAEKKGNSNEITAIDLSI 237
Query: 235 DQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDD-GDPPRLWVPNGMYPG 293
DQTPFR+DELERVK+ GARVLTLDQIEGLKNPDVQCWGTEEGDD GDPPRLWVPNGMYPG
Sbjct: 238 DQTPFRDDELERVKMCGARVLTLDQIEGLKNPDVQCWGTEEGDDDGDPPRLWVPNGMYPG 297
Query: 294 TAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKD 353
TAFTRSIGDSIAETIGVVANPEIVV+ELT +HPFFVLASDGVFEF+SSQ V++MVAKYKD
Sbjct: 298 TAFTRSIGDSIAETIGVVANPEIVVFELTPNHPFFVLASDGVFEFISSQTVIEMVAKYKD 357
Query: 354 PRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQVIE 413
PRDACAAIVAE+YRLWLQYETRTDDITVIVVH++GL ++AV Q G LR P+PQV+E
Sbjct: 358 PRDACAAIVAEAYRLWLQYETRTDDITVIVVHVDGLTDSAVGQLTNQGAVLRPPIPQVVE 417
Query: 414 VTGSESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIER 473
+TGSESPSTFGWSSRN R+RHD+SRARLRAIE+SLENG++WVP S A RKTWEEEAHIER
Sbjct: 418 LTGSESPSTFGWSSRNHRVRHDISRARLRAIESSLENGKVWVPPSPARRKTWEEEAHIER 477
Query: 474 ALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE 533
ALHDHFLFRKLTDSQCHVLLDCMQRVEVQAG+IVVKQGGEGDCFYVVGSGEFEV ATQEE
Sbjct: 478 ALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGEIVVKQGGEGDCFYVVGSGEFEVFATQEE 537
Query: 534 KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFS 593
KNGEVP+VLQRYTAEKLSSFGELALMYNKPLQASVRAVT+G LWALKREDFRGILMSEFS
Sbjct: 538 KNGEVPKVLQRYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILMSEFS 597
Query: 594 NLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRI 653
NLSSLKLLR+VDLLSRLTILQLSH+AD+LSEVSFS GQTI + NEG +ALYIIQRG+VR+
Sbjct: 598 NLSSLKLLRTVDLLSRLTILQLSHIADSLSEVSFSDGQTIFDGNEGPSALYIIQRGKVRL 657
Query: 654 TFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAV 713
TFDA++LS+ NV SLKSD EDD S ++LS+EK EGSYFGEW LLGE++G LTAVAV
Sbjct: 658 TFDAEVLSSQNVGSLKSDNKKEDDNLSSVEKLSLEKIEGSYFGEWALLGEYLGPLTAVAV 717
Query: 714 DDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEW 773
D C+ILTKEKFD VVGPLTK+S D D K+ +S D S+ KV TDMEW
Sbjct: 718 GDCTCSILTKEKFDSVVGPLTKLSQD---------DFAKESIESTDTSAPLKVRFTDMEW 768
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
+ CLY+TDCSEIG+V L+DSEN LSLKRF KQK+K LGKE QVLKEKNLMKS++PSACVP
Sbjct: 769 KTCLYTTDCSEIGIVFLKDSENLLSLKRFLKQKIKRLGKEAQVLKEKNLMKSLNPSACVP 828
Query: 834 QILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRG 893
Q+LCTCAD HAG+LLN L+CPLASILH LDE SARFCAASVV ALEDLHK GVLYRG
Sbjct: 829 QVLCTCADRTHAGILLNACLSCPLASILHAALDESSARFCAASVVIALEDLHKNGVLYRG 888
Query: 894 VSPDVLMLDKSGHLQ 908
VSPDVLMLD++G LQ
Sbjct: 889 VSPDVLMLDQTGRLQ 903
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356495224|ref|XP_003516479.1| PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1457 bits (3773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 712/912 (78%), Positives = 794/912 (87%), Gaps = 17/912 (1%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQ 60
MGC+YSR CIG+ C R + I +P E+ FSP SSSD + E RDQ++Q
Sbjct: 1 MGCIYSRVCIGDNC--RGSSIN-GDP--IARNDVAEVVNFSP--SSSDVEEGEIRDQLNQ 53
Query: 61 L----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQD 116
L + E GI RL+RVS+QFLPP+GSR V VPS +ELRYSFLSQRGYYPDALDKANQD
Sbjct: 54 LSITRDSEAGIRRLARVSAQFLPPDGSRIVNVPSGNFELRYSFLSQRGYYPDALDKANQD 113
Query: 117 SFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSY 176
SFCIHTPFGTS +DHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN+KF D V+ACH+++
Sbjct: 114 SFCIHTPFGTSPNDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSKFRADPVEACHAAF 173
Query: 177 LTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQ 236
L TNSQLH DVLDDSMSGTTA+TVLVRGRTIYVANSGDSRAV+AERRGKE+VAVDLSIDQ
Sbjct: 174 LATNSQLHNDVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEVVAVDLSIDQ 233
Query: 237 TPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAF 296
TPFR DELERVK+ GARVLT+DQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAF
Sbjct: 234 TPFRSDELERVKMCGARVLTMDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAF 293
Query: 297 TRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRD 356
TRSIGDSIAETIGVVANPEIVV+ELT DHPFFVLASDGVFEFLSSQ VV+MV K+KDPRD
Sbjct: 294 TRSIGDSIAETIGVVANPEIVVFELTQDHPFFVLASDGVFEFLSSQTVVEMVVKFKDPRD 353
Query: 357 ACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQVIEVTG 416
ACAAIVAESYRLWLQYETRTDDITVI+VH+NGL +AV QS G LR PVPQV+EVTG
Sbjct: 354 ACAAIVAESYRLWLQYETRTDDITVIIVHVNGLTESAVGQSASYGDVLRNPVPQVVEVTG 413
Query: 417 SESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERALH 476
SESPSTFGWS+RN R+RHDLSRARLRA+ENSLENGQ WVP SSAHRKTWEEEAHIE+ALH
Sbjct: 414 SESPSTFGWSARNHRVRHDLSRARLRALENSLENGQSWVPPSSAHRKTWEEEAHIEQALH 473
Query: 477 DHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNG 536
DHFLFRKLTDSQCHVLLDCMQRVEVQ GDI+VKQGGEGDCFYVVGSGEFEV+ATQEEK+G
Sbjct: 474 DHFLFRKLTDSQCHVLLDCMQRVEVQPGDIIVKQGGEGDCFYVVGSGEFEVLATQEEKDG 533
Query: 537 EVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596
EVPRVLQRYTAEKLS FGELALMYNKPLQASVRAVT G LWALKREDFRGILMSEFSNLS
Sbjct: 534 EVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLS 593
Query: 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFD 656
SLKLLRSVDLLSRL+ILQLS ++D+LSEVSFS GQTI++ NE V ALYIIQ+G+V+ITFD
Sbjct: 594 SLKLLRSVDLLSRLSILQLSQISDSLSEVSFSNGQTIIDKNE-VLALYIIQKGRVKITFD 652
Query: 657 ADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDV 716
+DLL+ N SLK ++ EDD QS KELS+EK EGSYFGEW LLGE++GSL+AVAV DV
Sbjct: 653 SDLLTGPNAYSLKPEIQNEDDA-QSGKELSIEKPEGSYFGEWALLGENIGSLSAVAVGDV 711
Query: 717 VCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKC 776
VCA+LTK+KF+ V+G L KIS +D S+DYS ++ + D SSL KV L+D+EWRK
Sbjct: 712 VCALLTKDKFESVIGSLQKISQEDHKSRDYSKEL----TTNYDFSSLDKVQLSDLEWRKT 767
Query: 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQIL 836
LYSTDCSEIGL LRDSE+ L+LKRFSK KVK LGKE QVLKEK L+K + SAC+PQ+L
Sbjct: 768 LYSTDCSEIGLANLRDSESLLTLKRFSKPKVKGLGKESQVLKEKILIKGMGSSACIPQVL 827
Query: 837 CTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSP 896
CTCAD M+AG+LLNT LACPL+SIL +P E +A+FCAASVV ALEDLHK GVLYRGVSP
Sbjct: 828 CTCADRMYAGILLNTRLACPLSSILSSPFSESAAQFCAASVVIALEDLHKNGVLYRGVSP 887
Query: 897 DVLMLDKSGHLQ 908
DVLML+++GH+Q
Sbjct: 888 DVLMLEQTGHIQ 899
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356529640|ref|XP_003533397.1| PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1432 bits (3707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/915 (77%), Positives = 787/915 (86%), Gaps = 23/915 (2%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQ 60
MGC+YSR CIG+ C R + I +P E+A FSP SSSD + E RDQ++Q
Sbjct: 1 MGCIYSRVCIGDNC--RGSSIN-GDPI-IARNDVAEVANFSP--SSSDVEEGEIRDQLNQ 54
Query: 61 L----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQD 116
L + E GI RL+RVS+QFLPP+GSR VK+PS +ELRYSFLSQRGYYPDALDKANQD
Sbjct: 55 LSITRDSEAGIRRLARVSAQFLPPDGSRIVKIPSGNFELRYSFLSQRGYYPDALDKANQD 114
Query: 117 SFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSY 176
SFCIHTPFGTS +DHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN+KF D V+ACH+++
Sbjct: 115 SFCIHTPFGTSPNDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSKFRADPVEACHAAF 174
Query: 177 LTTNSQLHADV-LDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKE--IVAVDLS 233
L TNSQLH DV LDDSMSGTTA+TVLVRGRTIYVANSGDSRAV+AERRGKE +VAVDLS
Sbjct: 175 LATNSQLHNDVVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEEEVVAVDLS 234
Query: 234 IDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPG 293
IDQTPFR DELERVK+ GARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPG
Sbjct: 235 IDQTPFRSDELERVKMCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPG 294
Query: 294 TAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKD 353
TAFTRSIGDSIAETIGVVANPEIVV+ELT DHPFFVLASDGVFEFLSSQ VV+MVAK+KD
Sbjct: 295 TAFTRSIGDSIAETIGVVANPEIVVFELTQDHPFFVLASDGVFEFLSSQTVVEMVAKFKD 354
Query: 354 PRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQVIE 413
PRDACAAIVAESYRLWLQYETRTDDITVI+VH+NGL +AV QS G LR PVPQV+E
Sbjct: 355 PRDACAAIVAESYRLWLQYETRTDDITVIIVHVNGLTESAVGQSASYGDVLRNPVPQVVE 414
Query: 414 VTGSESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIER 473
VTGSESPSTFGWS+RN R+RH+LSRARLRA+ENSLENGQ WVP SSAHRKTWEEEAHIE+
Sbjct: 415 VTGSESPSTFGWSARNHRVRHELSRARLRALENSLENGQTWVPPSSAHRKTWEEEAHIEQ 474
Query: 474 ALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE 533
ALHDHFLFRKLTDSQCHVLLDCMQRVEVQ GDI+VKQGGEGDCFYVVGSGEFEV ATQEE
Sbjct: 475 ALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDIIVKQGGEGDCFYVVGSGEFEVSATQEE 534
Query: 534 KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFS 593
K+GE PRVLQ YTAEKLS FGELALMYNKPLQASV AVT G LW+LKREDFRGILMSEFS
Sbjct: 535 KDGEAPRVLQHYTAEKLSCFGELALMYNKPLQASVCAVTKGTLWSLKREDFRGILMSEFS 594
Query: 594 NLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRI 653
NLSSLKLLRSVDLLSRL+ILQLS ++D+LSEVSFS GQTI++ NE V ALYIIQ+G+V+I
Sbjct: 595 NLSSLKLLRSVDLLSRLSILQLSQISDSLSEVSFSNGQTIIDKNE-VLALYIIQKGRVKI 653
Query: 654 TFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAV 713
T D+DLLS N SLK D+ EDD QS KELS+EK EGSYFGEW LLGE++GSL+AVAV
Sbjct: 654 TLDSDLLSCPNAYSLKPDIQSEDD-VQSGKELSIEKPEGSYFGEWALLGENIGSLSAVAV 712
Query: 714 DDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEW 773
DVVCA+LTKEKF+ V+G L KIS +D S+DYS ++ + SSL KV L+D+EW
Sbjct: 713 GDVVCALLTKEKFESVIGSLQKISQEDHKSRDYS--------RNYEFSSLDKVQLSDLEW 764
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
RK LYSTDCSEIGL RDSEN L+LKRFSK KVK LGKE QV KE++L+ + AC P
Sbjct: 765 RKTLYSTDCSEIGLANFRDSENLLTLKRFSKPKVKKLGKESQVFKERDLIMGMGSLACTP 824
Query: 834 QILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRG 893
Q+LCTCAD M+AG+LLNT LACPL+SIL +P E +A+FCAASVV ALEDLHK GVLYRG
Sbjct: 825 QVLCTCADLMYAGILLNTRLACPLSSILSSPFSESAAQFCAASVVTALEDLHKNGVLYRG 884
Query: 894 VSPDVLMLDKSGHLQ 908
VSPDVLML+++GH+Q
Sbjct: 885 VSPDVLMLEQTGHIQ 899
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449527276|ref|XP_004170638.1| PREDICTED: LOW QUALITY PROTEIN: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1428 bits (3696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 701/915 (76%), Positives = 786/915 (85%), Gaps = 14/915 (1%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQ 60
MGCVYSR CIGE TPR +RI + ++T E+ S +SS S + ET D+++Q
Sbjct: 1 MGCVYSRVCIGEATTPRSSRI----AETQNAKTATEMDTISSSSSDSQ--EGETGDRLNQ 54
Query: 61 LNP-----ELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQ 115
LN E GITRLSRVSSQFLP EGSRTVKVPS +ELRYSFLSQRGYYPDALDKANQ
Sbjct: 55 LNSNNRDSEAGITRLSRVSSQFLPAEGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQ 114
Query: 116 DSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSS 175
DSFCIHTPFG S DDHFFGVFDGHGE+GAQCSQFVKRKLCENLLRN++FH DAV+ACH++
Sbjct: 115 DSFCIHTPFGNSPDDHFFGVFDGHGEYGAQCSQFVKRKLCENLLRNSRFHSDAVEACHAA 174
Query: 176 YLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSID 235
LTTNSQLHAD+LDDSMSGTTA+TVLVRGRTIYVANSGDSRAV+AERRGKE+VAVDLSID
Sbjct: 175 NLTTNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEVVAVDLSID 234
Query: 236 QTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTA 295
QTPFR DELERVKL GARVLTLDQIEGLKNPD+QCWGTEEGDDGDPPRLWVPNGMYPGTA
Sbjct: 235 QTPFRTDELERVKLCGARVLTLDQIEGLKNPDIQCWGTEEGDDGDPPRLWVPNGMYPGTA 294
Query: 296 FTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPR 355
FTRSIGDSIAETIGVVA PEIVV ELT DHPFFV+ASDGVFEFLSSQ VVDMV KYKDPR
Sbjct: 295 FTRSIGDSIAETIGVVATPEIVVLELTQDHPFFVVASDGVFEFLSSQTVVDMVRKYKDPR 354
Query: 356 DACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGV--FLRTPVPQVIE 413
DACAAIVAESYRLWLQ+ETRTDDIT++VVHINGL NT ++S G F+ + +PQV+E
Sbjct: 355 DACAAIVAESYRLWLQFETRTDDITILVVHINGLTNTVTSESTRSGGGGFVPSAIPQVME 414
Query: 414 VTGSESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIER 473
VTGSESPSTFGW+ RN R R DLSRARLRAI++SLENGQ+WVP S AHRK+WEEEAHIER
Sbjct: 415 VTGSESPSTFGWN-RNNRARQDLSRARLRAIKSSLENGQVWVPPSPAHRKSWEEEAHIER 473
Query: 474 ALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE 533
ALHDHFLFRKLTDSQC VLLDCMQRVEV G IVV+QGGEGDCFYVVGSGEFEV ATQEE
Sbjct: 474 ALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVSATQEE 533
Query: 534 KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFS 593
+GEVPRVLQ YTAEKLSSFGELALMYNKPLQASVRAVT+G LWALKREDFRGIL+SEFS
Sbjct: 534 SHGEVPRVLQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFS 593
Query: 594 NLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRI 653
NLSSLKLLRSVDLLS+LTILQLSH+AD LSEV FS G+ IV+ EG AL+IIQ+GQVRI
Sbjct: 594 NLSSLKLLRSVDLLSKLTILQLSHIADCLSEVQFSDGELIVDGTEGSCALHIIQKGQVRI 653
Query: 654 TFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAV 713
TFDA+L+SN+NV S ED QS E+S + EGSYFGEW LLGEH+G L AVAV
Sbjct: 654 TFDAELMSNSNVYSFNYVSQKEDGAAQSGSEISAIRKEGSYFGEWALLGEHIGFLRAVAV 713
Query: 714 DDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEW 773
DVVCAILTKEKF+ VVGP+ K+S DDQ + ++S + + AK IDIS+L+KV L+D+EW
Sbjct: 714 GDVVCAILTKEKFESVVGPIPKLSQDDQKATEHSLNSLHRSAKIIDISALSKVGLSDLEW 773
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
+ CLYST+ SEIGLV LR++E LSLKRF++QKVK LG E QVLKEKNLMK++S SACVP
Sbjct: 774 KMCLYSTEYSEIGLVRLRNTETMLSLKRFTRQKVKRLGLEAQVLKEKNLMKTISSSACVP 833
Query: 834 QILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRG 893
++LCTC D HAG+LL T LACPL+SILH PLDE SARF AAS++ A+EDLHK GVL+RG
Sbjct: 834 ELLCTCFDQSHAGILLKTCLACPLSSILHVPLDEFSARFFAASLIMAMEDLHKIGVLHRG 893
Query: 894 VSPDVLMLDKSGHLQ 908
+SPDVLMLD++GH+Q
Sbjct: 894 ISPDVLMLDQTGHIQ 908
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|167989427|gb|ACA13523.1| putative cyclic nucleotide-dependent hybrid protein phosphatase 2C/protein kinase isoform A variant 1 [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 1427 bits (3695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/913 (75%), Positives = 785/913 (85%), Gaps = 11/913 (1%)
Query: 1 MGCVYSRA-CIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQIS 59
MGCVYSRA CIGEIC PR+ + +KEP+ + IAVFSPASSS DG + E RDQ++
Sbjct: 1 MGCVYSRASCIGEICAPRN--VEVKEPENL--KAAAGIAVFSPASSS-DGEEGEIRDQLN 55
Query: 60 QL----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQ 115
QL + ++GITRLSRVS+QFLPP+GSR VKVPS YELR SFLSQRGYYPDALDKANQ
Sbjct: 56 QLSLSRDNDIGITRLSRVSAQFLPPDGSRVVKVPSGNYELRCSFLSQRGYYPDALDKANQ 115
Query: 116 DSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSS 175
DSFCIHTPFGTS +DHFFGVFDGHGEFGAQCSQFVK+KLCENLLRN+KFH DAV+ACH++
Sbjct: 116 DSFCIHTPFGTSPNDHFFGVFDGHGEFGAQCSQFVKKKLCENLLRNSKFHSDAVEACHAA 175
Query: 176 YLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSID 235
+LTTN+QLHAD +DDSMSGTTA+T+LVRGRT+Y+ANSGDSRAV+AER+G EIVAVDLSID
Sbjct: 176 FLTTNTQLHADAIDDSMSGTTAITILVRGRTLYIANSGDSRAVIAERQGNEIVAVDLSID 235
Query: 236 QTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTA 295
QTPFR DE ERVKL GARVLTLDQIEGLKNPDVQCW TEEGDDGDPPRLWVPNGMYPGTA
Sbjct: 236 QTPFRPDESERVKLCGARVLTLDQIEGLKNPDVQCWDTEEGDDGDPPRLWVPNGMYPGTA 295
Query: 296 FTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPR 355
FTRSIGDS+AETIGVV NPEIVV ELT++HPFFV+ASDGVFEFLSSQ VVDMVAKYKDPR
Sbjct: 296 FTRSIGDSVAETIGVVPNPEIVVLELTSNHPFFVIASDGVFEFLSSQTVVDMVAKYKDPR 355
Query: 356 DACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQVIEVT 415
DACAAIVAESYRLWLQYETRTDDITVIVV +NGL + AV QS V LR P+PQV+E++
Sbjct: 356 DACAAIVAESYRLWLQYETRTDDITVIVVQVNGLTDVAVGQSTSSDVVLRPPLPQVVELS 415
Query: 416 GSESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERAL 475
GSESPS W+SRNQR R D+SRARLRAIENSL+NGQ+W P S AHRKTWEEEA I+R L
Sbjct: 416 GSESPSVMNWNSRNQRARQDISRARLRAIENSLKNGQMWAPPSPAHRKTWEEEAQIDRVL 475
Query: 476 HDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKN 535
HDHFLFRKLTDSQC VLLDCMQ+VEVQAGD+VVKQGGE D FYV+GSGEFEV+ATQ+EKN
Sbjct: 476 HDHFLFRKLTDSQCQVLLDCMQKVEVQAGDVVVKQGGECDSFYVIGSGEFEVLATQDEKN 535
Query: 536 GEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNL 595
G VPRVLQ YTA+KLSSFGELALMYNKPLQASVRAVTNG+LW LKREDFR ILMSEF+NL
Sbjct: 536 GGVPRVLQHYTADKLSSFGELALMYNKPLQASVRAVTNGILWELKREDFRNILMSEFTNL 595
Query: 596 SSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITF 655
SSLKLLRSVDLLSRLTILQLSH+A+ +SEV FS GQTIVN N+ LYIIQ+G V+ITF
Sbjct: 596 SSLKLLRSVDLLSRLTILQLSHIAELVSEVPFSDGQTIVNENQEPMGLYIIQKGVVKITF 655
Query: 656 DADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDD 715
D DL+ N SL + +DD TQ+ K ++VEKSEGSYFGEWTLLGE + SL+A+AV D
Sbjct: 656 DMDLVKCENASSLMCENQKQDD-TQNKKGITVEKSEGSYFGEWTLLGEQIASLSAIAVGD 714
Query: 716 VVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRK 775
VVCAILTKEKFD VVG L K+S DD +K + + + + +S+D S LA + L +EW+
Sbjct: 715 VVCAILTKEKFDSVVGSLAKLSQDDLKAKGHQTILSSESIQSVDTSMLADLQLAYLEWQT 774
Query: 776 CLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQI 835
CLYSTDCSEIGLV L+DS+ LSLKRFSKQK+K LGKE QVLKEKNL+K ++ A VP++
Sbjct: 775 CLYSTDCSEIGLVRLKDSDKLLSLKRFSKQKIKMLGKEAQVLKEKNLLKQMNRVASVPKV 834
Query: 836 LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVS 895
LCTCAD HAG++L++ LAC + +ILH PLDE+SARFCAASVV ALEDLH G+LYRGVS
Sbjct: 835 LCTCADETHAGIILDSCLACSVVAILHNPLDEESARFCAASVVIALEDLHNNGILYRGVS 894
Query: 896 PDVLMLDKSGHLQ 908
PDVLMLD++GH+Q
Sbjct: 895 PDVLMLDQTGHIQ 907
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449467106|ref|XP_004151266.1| PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1427 bits (3694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 700/915 (76%), Positives = 786/915 (85%), Gaps = 14/915 (1%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQ 60
MGCVYSR CIGE TPR +RI + ++T E+ S +SS S + ET D+++Q
Sbjct: 1 MGCVYSRVCIGEATTPRSSRI----AETQNAKTATEMDTISSSSSDSQ--EGETGDRLNQ 54
Query: 61 LNP-----ELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQ 115
LN E GITRLSRVSSQFLP EGSRTVKVPS +ELRYSFLSQRGYYPDALDKANQ
Sbjct: 55 LNSNNRDSEAGITRLSRVSSQFLPAEGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQ 114
Query: 116 DSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSS 175
DSFCIHTPFG S DDHFFGVFDGHGE+GAQCSQFVKRKLCENLLRN++F DAV+ACH++
Sbjct: 115 DSFCIHTPFGNSPDDHFFGVFDGHGEYGAQCSQFVKRKLCENLLRNSRFQSDAVEACHAA 174
Query: 176 YLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSID 235
YLTTNSQLHAD+LDDSMSGTTA+TVLVRGRTIYVANSGDSRAV+AERRGKE+VAVDLSID
Sbjct: 175 YLTTNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEVVAVDLSID 234
Query: 236 QTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTA 295
QTPFR DELERVKL GARVLTLDQIEGLKNPD+QCWG+EEGDDGDPPRLWVPNGMYPGTA
Sbjct: 235 QTPFRTDELERVKLCGARVLTLDQIEGLKNPDIQCWGSEEGDDGDPPRLWVPNGMYPGTA 294
Query: 296 FTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPR 355
FTRSIGDSIAETIGVVA PEIVV ELT DHPFFV+ASDGVFEFLSS+ VVDMV KYKDPR
Sbjct: 295 FTRSIGDSIAETIGVVATPEIVVLELTQDHPFFVVASDGVFEFLSSRTVVDMVCKYKDPR 354
Query: 356 DACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGV--FLRTPVPQVIE 413
DACAAIVAESYRLWLQ+ETRTDDIT++VVHINGL NT ++S G F+ + +PQV+E
Sbjct: 355 DACAAIVAESYRLWLQFETRTDDITILVVHINGLTNTVTSESTRSGGGGFVPSAIPQVME 414
Query: 414 VTGSESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIER 473
VTGSESPSTFGW+ RN R R DLSRARLRAIE+SLENGQ+WVP S AHRK+WEEEAHIER
Sbjct: 415 VTGSESPSTFGWN-RNNRARQDLSRARLRAIESSLENGQVWVPPSPAHRKSWEEEAHIER 473
Query: 474 ALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE 533
ALHDHFLFRKLTDSQC VLLDCMQRVEV G IVV+QGGEGDCFYVVGSGEFEV+ATQEE
Sbjct: 474 ALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEE 533
Query: 534 KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFS 593
+GEVPRVLQ YTAEKLSSFGELALMYNKPLQASVRAVT+G LWALKREDFRGIL+SEFS
Sbjct: 534 SHGEVPRVLQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFS 593
Query: 594 NLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRI 653
NLSSLKLLRSVDLLS+LTILQLSH+AD LSEV FS G+ IV+ EG AL+IIQ+GQVRI
Sbjct: 594 NLSSLKLLRSVDLLSKLTILQLSHIADCLSEVQFSDGELIVDGTEGSCALHIIQKGQVRI 653
Query: 654 TFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAV 713
TFDA+L+SN+NV S ED QS E+S + EGSYFGEW LLGE +G L AVAV
Sbjct: 654 TFDAELMSNSNVYSFNYVSQKEDGAAQSGSEISAIRKEGSYFGEWALLGERIGFLRAVAV 713
Query: 714 DDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEW 773
DVVCAILTKEKF+ VVGP+ K+S DDQ + ++S + + AK IDIS+L+KV L+D+EW
Sbjct: 714 GDVVCAILTKEKFESVVGPIPKLSQDDQKATEHSLNSLHRSAKIIDISALSKVGLSDLEW 773
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
+ CLYST+ SEIGLV LR++E LSLKRFS+QKVK LG E QVLKEKNLMK++S SACVP
Sbjct: 774 KMCLYSTEYSEIGLVRLRNTETMLSLKRFSRQKVKWLGLEAQVLKEKNLMKTISSSACVP 833
Query: 834 QILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRG 893
++LCTC D HAG+LL T LACPL+SILH PLDE SARF AAS++ A+EDLHK GVL+RG
Sbjct: 834 ELLCTCFDQSHAGILLKTCLACPLSSILHVPLDEFSARFFAASLIMAMEDLHKLGVLHRG 893
Query: 894 VSPDVLMLDKSGHLQ 908
+SPDVLMLD++GH+Q
Sbjct: 894 ISPDVLMLDQTGHIQ 908
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|240254485|ref|NP_179595.5| protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein [Arabidopsis thaliana] gi|226739228|sp|Q9SL76.2|P2C19_ARATH RecName: Full=Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein; Includes: RecName: Full=Probable protein phosphatase 2C 19; Short=AtPP2C19; Includes: RecName: Full=Probable inactive cyclic nucleotide-dependent protein kinase At2g20050 gi|156505841|gb|ABU68673.1| putative cyclic nucleotide-dependent hybrid protein phosphatase 2C/protein kinase [Arabidopsis thaliana] gi|192759047|gb|ACF05481.1| putative cyclic nucleotide dependent kinase-phosphatase [Arabidopsis thaliana] gi|330251864|gb|AEC06958.1| protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1332 bits (3446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/920 (71%), Positives = 758/920 (82%), Gaps = 12/920 (1%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSRTTNEIAVFSPASS-------SSDGPDAE 53
MGC YS+ CIG+IC ++ IR Q + T A + SSD D
Sbjct: 1 MGCAYSKTCIGQICATKENSIRQTHQQAPSRGGTRATAAAAAVEEDNPVFNFSSDAVDDV 60
Query: 54 TRDQISQL----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDA 109
D+I QL + E GITRLSRVSSQFLPP+GSR VKVPS YELR SFLSQRGYYPDA
Sbjct: 61 DNDEIHQLGLSRDQEWGITRLSRVSSQFLPPDGSRVVKVPSCNYELRCSFLSQRGYYPDA 120
Query: 110 LDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAV 169
LDKANQDSF IHTPFG++ DDHFFGVFDGHGEFGAQCSQFVKR+LCENLLR+ +F D
Sbjct: 121 LDKANQDSFAIHTPFGSNSDDHFFGVFDGHGEFGAQCSQFVKRRLCENLLRHGRFRVDPA 180
Query: 170 DACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVA 229
+AC+S++LTTNSQLHAD++DDSMSGTTA+TV+VRGRTIYVAN+GDSRAVLAE+R ++VA
Sbjct: 181 EACNSAFLTTNSQLHADLVDDSMSGTTAITVMVRGRTIYVANAGDSRAVLAEKRDGDLVA 240
Query: 230 VDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNG 289
VDLSIDQTPFR DELERVKL GARVLTLDQIEGLKNPDVQCWGTEE DDGDPPRLWVPNG
Sbjct: 241 VDLSIDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEDDDGDPPRLWVPNG 300
Query: 290 MYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVA 349
MYPGTAFTRSIGDSIAETIGVVANPEI V ELT D+PFFV+ASDGVFEF+SSQ VVDMVA
Sbjct: 301 MYPGTAFTRSIGDSIAETIGVVANPEIAVVELTPDNPFFVVASDGVFEFISSQTVVDMVA 360
Query: 350 KYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVP 409
K+KDPRDACAAIVAESYRLWLQYETRTDDIT+IVVHI+GLK+ A Q G L+ P+P
Sbjct: 361 KHKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHIDGLKDDAPRQLSSTGTQLQPPIP 420
Query: 410 QVIEVTGSESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEA 469
QV+E+TGSESPSTFGW+S+NQR+RHDLSRAR+RAIENSLENG WVP S AHRKTWEEEA
Sbjct: 421 QVVELTGSESPSTFGWNSKNQRVRHDLSRARIRAIENSLENGHAWVPPSPAHRKTWEEEA 480
Query: 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMA 529
HIER L DHFLFRKLTDSQC VLLDCMQR+E GDIVVKQGGEGDCFYVVGSGEFEV+A
Sbjct: 481 HIERVLRDHFLFRKLTDSQCQVLLDCMQRLEANPGDIVVKQGGEGDCFYVVGSGEFEVLA 540
Query: 530 TQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILM 589
TQ+ KNGEVPR+LQRYTAEK SSFGELALM+NKPLQASVRAV +G LWALKREDFRGILM
Sbjct: 541 TQDGKNGEVPRILQRYTAEKQSSFGELALMHNKPLQASVRAVDHGTLWALKREDFRGILM 600
Query: 590 SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRG 649
SEFSNL+SLKLLRSVDLLSRLTILQLSH+A++LSE FS GQTIV ++ + LY+IQ+G
Sbjct: 601 SEFSNLASLKLLRSVDLLSRLTILQLSHVAESLSEACFSDGQTIVTKDQKLQGLYVIQKG 660
Query: 650 QVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLT 709
+V+I+F ++L + NV SL + + E D + E+S+EK EGSYFGEW LLGE SL+
Sbjct: 661 RVKISFCTEVLESQNVSSLTTGITNEYDNLEIGTEVSIEKHEGSYFGEWALLGELKDSLS 720
Query: 710 AVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLT 769
VAV +VVC +LTKE F+ VGPLT IS D ++ S ++ K+ AK D ++LAK +L
Sbjct: 721 VVAVGEVVCVVLTKENFESAVGPLTNISDDGPKTRHSSFELSKESAKVTDTTALAKATLA 780
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV-SP 828
D+EW CL +TDCSEIGLV L+D EN LSLKRFSKQKVK LGKE QVLKE+NLMK+V P
Sbjct: 781 DLEWTTCLSTTDCSEIGLVHLKDKENLLSLKRFSKQKVKKLGKEAQVLKERNLMKNVIKP 840
Query: 829 SACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRG 888
SA VP+ILCTC D A +LLNT LACP++S+LH+PLDE S RF S+V+A+ED+HK
Sbjct: 841 SAIVPEILCTCVDQTFAAILLNTTLACPISSLLHSPLDESSVRFITGSLVSAIEDIHKNE 900
Query: 889 VLYRGVSPDVLMLDKSGHLQ 908
+L+RG SP++LMLD+SG+LQ
Sbjct: 901 ILFRGSSPELLMLDQSGYLQ 920
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297832136|ref|XP_002883950.1| hypothetical protein ARALYDRAFT_480465 [Arabidopsis lyrata subsp. lyrata] gi|297329790|gb|EFH60209.1| hypothetical protein ARALYDRAFT_480465 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1325 bits (3430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/924 (71%), Positives = 760/924 (82%), Gaps = 21/924 (2%)
Query: 1 MGCVYSRACIGEICTPRDARIRIKEPQQTTSR----------TTNEIAVFSPASS-SSDG 49
MGC YS+ CIG+IC ++ IR + QQ R +P + SSD
Sbjct: 1 MGCAYSKTCIGQICATKENSIR-QTHQQAPERGGTKAAITAAAGAGAEEENPVFNFSSDA 59
Query: 50 PDAETRDQISQL----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGY 105
D E D+I QL + E GITRLSRVSSQFLPP+GSR VKVPS YELR SFLSQRGY
Sbjct: 60 VDDEDDDEIHQLGLSRDQEWGITRLSRVSSQFLPPDGSRVVKVPSCNYELRCSFLSQRGY 119
Query: 106 YPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFH 165
YPDALDKANQDSF IHTPFG++ DDHFFGVFDGHGEFGAQCSQFVKR+LCENLLR+ +F
Sbjct: 120 YPDALDKANQDSFAIHTPFGSNSDDHFFGVFDGHGEFGAQCSQFVKRRLCENLLRHGRFR 179
Query: 166 EDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGK 225
D +AC+S++L TNSQLHAD++DDSMSGTTA+TV+VRGRTIYVAN+GDSRAVLAE+R
Sbjct: 180 VDPAEACNSAFLATNSQLHADLVDDSMSGTTAITVMVRGRTIYVANAGDSRAVLAEKRDG 239
Query: 226 EIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLW 285
+++AVDLSIDQTPFR DELERVKL GARVLTLDQIEGLKNPDVQCWGTEE DDGDPPRLW
Sbjct: 240 DLIAVDLSIDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEDDDGDPPRLW 299
Query: 286 VPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVV 345
VPNGMYPGTAFTRSIGDSIAETIGVVANPEI V ELT D+PFFV+ASDGVFEF+SSQ VV
Sbjct: 300 VPNGMYPGTAFTRSIGDSIAETIGVVANPEIAVVELTPDNPFFVVASDGVFEFISSQTVV 359
Query: 346 DMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLR 405
DMVAK+KDPRDACAAIVAESYRLWLQYETRTDDIT+IVVHI+GL++ G L+
Sbjct: 360 DMVAKHKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHIDGLRDV----RKASGTQLQ 415
Query: 406 TPVPQVIEVTGSESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTW 465
P+PQV+E+TGSESPSTFGW+S+NQR+RHDLSRAR+RAIENSLENG WVP S AHRKTW
Sbjct: 416 PPIPQVVELTGSESPSTFGWNSKNQRVRHDLSRARIRAIENSLENGHAWVPPSPAHRKTW 475
Query: 466 EEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEF 525
EEEAHIER L DHFLFRKLTDSQC VLLDCMQR E GDIVVKQGGEGDCFYVVGSGEF
Sbjct: 476 EEEAHIERVLRDHFLFRKLTDSQCQVLLDCMQRFEANPGDIVVKQGGEGDCFYVVGSGEF 535
Query: 526 EVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
EV+ATQ+EKNGEVPR+LQRYTAEK SSFGELALM+NKPLQASVRAV +G LWALKREDFR
Sbjct: 536 EVLATQDEKNGEVPRILQRYTAEKQSSFGELALMHNKPLQASVRAVDHGTLWALKREDFR 595
Query: 586 GILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYI 645
GILMSEFSNL+SLKLLRSVDLLSRLTILQLSH+A++LSE FS GQTIV +E + LY+
Sbjct: 596 GILMSEFSNLASLKLLRSVDLLSRLTILQLSHVAESLSEACFSDGQTIVTKDEKLQGLYV 655
Query: 646 IQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHM 705
IQ+G+V+I+F ++L + NV SL + + E D + E+S+EK EGSYFGEW LLGE
Sbjct: 656 IQKGRVKISFGTEVLESQNVSSLTTGITKEYDNLEIGTEVSIEKHEGSYFGEWALLGELK 715
Query: 706 GSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAK 765
SL+ VAV +VVC +LTKE F+ VGPLT IS D ++ S ++ K+ AK D +SLAK
Sbjct: 716 DSLSVVAVGEVVCVVLTKENFESAVGPLTNISDDGHKTRHSSFELSKESAKVTDTTSLAK 775
Query: 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKS 825
+L D+EW CL STDCSEIGLV L+D EN LSLKRFSKQKVK LGKE QVLKE+NLMK+
Sbjct: 776 ATLADLEWTTCLSSTDCSEIGLVHLKDKENLLSLKRFSKQKVKKLGKEAQVLKERNLMKN 835
Query: 826 V-SPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDL 884
V PSA VP+ILCTC D A +LLNT LACP++S+LH+PLDE SARF AS+V+ALED+
Sbjct: 836 VIKPSAFVPEILCTCVDQTFAAILLNTTLACPISSLLHSPLDESSARFITASLVSALEDI 895
Query: 885 HKRGVLYRGVSPDVLMLDKSGHLQ 908
HK +L+RG SP++LMLD+SG+LQ
Sbjct: 896 HKNEILFRGSSPELLMLDQSGYLQ 919
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 908 | ||||||
| TAIR|locus:2061673 | 1094 | AT2G20050 [Arabidopsis thalian | 1.0 | 0.829 | 0.711 | 0.0 | |
| TAIR|locus:2082465 | 348 | AT3G06270 [Arabidopsis thalian | 0.341 | 0.890 | 0.608 | 9.1e-100 | |
| FB|FBgn0022382 | 377 | Pka-R2 "cAMP-dependent protein | 0.204 | 0.493 | 0.358 | 4.3e-30 | |
| FB|FBgn0000442 | 768 | Pkg21D "cGMP-dependent protein | 0.458 | 0.541 | 0.267 | 6.5e-30 | |
| UNIPROTKB|E7EPE6 | 733 | PRKG2 "cGMP-dependent protein | 0.201 | 0.249 | 0.307 | 7.7e-30 | |
| ZFIN|ZDB-GENE-030131-4745 | 571 | si:dkey-121j17.5 "si:dkey-121j | 0.196 | 0.311 | 0.321 | 1.4e-29 | |
| MGI|MGI:108174 | 671 | Prkg1 "protein kinase, cGMP-de | 0.191 | 0.259 | 0.311 | 5.5e-29 | |
| UNIPROTKB|F1RVC8 | 762 | PRKG2 "cGMP-dependent protein | 0.201 | 0.240 | 0.307 | 6.7e-29 | |
| UNIPROTKB|P00516 | 671 | PRKG1 "cGMP-dependent protein | 0.191 | 0.259 | 0.306 | 1.9e-28 | |
| UNIPROTKB|F1NE85 | 685 | F1NE85 "cGMP-dependent protein | 0.200 | 0.265 | 0.298 | 2e-28 |
| TAIR|locus:2061673 AT2G20050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3373 (1192.4 bits), Expect = 0., P = 0.
Identities = 655/920 (71%), Positives = 756/920 (82%)
Query: 1 MGCVYSRACIGEICTPRDARIRI---KEPQQTTSRTTNEIAVFXXXXXXXXXXXXET--- 54
MGC YS+ CIG+IC ++ IR + P + +R T A
Sbjct: 1 MGCAYSKTCIGQICATKENSIRQTHQQAPSRGGTRATAAAAAVEEDNPVFNFSSDAVDDV 60
Query: 55 -RDQISQL----NPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDA 109
D+I QL + E GITRLSRVSSQFLPP+GSR VKVPS YELR SFLSQRGYYPDA
Sbjct: 61 DNDEIHQLGLSRDQEWGITRLSRVSSQFLPPDGSRVVKVPSCNYELRCSFLSQRGYYPDA 120
Query: 110 LDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAV 169
LDKANQDSF IHTPFG++ DDHFFGVFDGHGEFGAQCSQFVKR+LCENLLR+ +F D
Sbjct: 121 LDKANQDSFAIHTPFGSNSDDHFFGVFDGHGEFGAQCSQFVKRRLCENLLRHGRFRVDPA 180
Query: 170 DACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVA 229
+AC+S++LTTNSQLHAD++DDSMSGTTA+TV+VRGRTIYVAN+GDSRAVLAE+R ++VA
Sbjct: 181 EACNSAFLTTNSQLHADLVDDSMSGTTAITVMVRGRTIYVANAGDSRAVLAEKRDGDLVA 240
Query: 230 VDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNG 289
VDLSIDQTPFR DELERVKL GARVLTLDQIEGLKNPDVQCWGTEE DDGDPPRLWVPNG
Sbjct: 241 VDLSIDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEDDDGDPPRLWVPNG 300
Query: 290 MYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVA 349
MYPGTAFTRSIGDSIAETIGVVANPEI V ELT D+PFFV+ASDGVFEF+SSQ VVDMVA
Sbjct: 301 MYPGTAFTRSIGDSIAETIGVVANPEIAVVELTPDNPFFVVASDGVFEFISSQTVVDMVA 360
Query: 350 KYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVP 409
K+KDPRDACAAIVAESYRLWLQYETRTDDIT+IVVHI+GLK+ A Q G L+ P+P
Sbjct: 361 KHKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHIDGLKDDAPRQLSSTGTQLQPPIP 420
Query: 410 QVIEVTGSESPSTFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEA 469
QV+E+TGSESPSTFGW+S+NQR+RHDLSRAR+RAIENSLENG WVP S AHRKTWEEEA
Sbjct: 421 QVVELTGSESPSTFGWNSKNQRVRHDLSRARIRAIENSLENGHAWVPPSPAHRKTWEEEA 480
Query: 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMA 529
HIER L DHFLFRKLTDSQC VLLDCMQR+E GDIVVKQGGEGDCFYVVGSGEFEV+A
Sbjct: 481 HIERVLRDHFLFRKLTDSQCQVLLDCMQRLEANPGDIVVKQGGEGDCFYVVGSGEFEVLA 540
Query: 530 TQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILM 589
TQ+ KNGEVPR+LQRYTAEK SSFGELALM+NKPLQASVRAV +G LWALKREDFRGILM
Sbjct: 541 TQDGKNGEVPRILQRYTAEKQSSFGELALMHNKPLQASVRAVDHGTLWALKREDFRGILM 600
Query: 590 SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRG 649
SEFSNL+SLKLLRSVDLLSRLTILQLSH+A++LSE FS GQTIV ++ + LY+IQ+G
Sbjct: 601 SEFSNLASLKLLRSVDLLSRLTILQLSHVAESLSEACFSDGQTIVTKDQKLQGLYVIQKG 660
Query: 650 QVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLT 709
+V+I+F ++L + NV SL + + E D + E+S+EK EGSYFGEW LLGE SL+
Sbjct: 661 RVKISFCTEVLESQNVSSLTTGITNEYDNLEIGTEVSIEKHEGSYFGEWALLGELKDSLS 720
Query: 710 AVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLT 769
VAV +VVC +LTKE F+ VGPLT IS D ++ S ++ K+ AK D ++LAK +L
Sbjct: 721 VVAVGEVVCVVLTKENFESAVGPLTNISDDGPKTRHSSFELSKESAKVTDTTALAKATLA 780
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV-SP 828
D+EW CL +TDCSEIGLV L+D EN LSLKRFSKQKVK LGKE QVLKE+NLMK+V P
Sbjct: 781 DLEWTTCLSTTDCSEIGLVHLKDKENLLSLKRFSKQKVKKLGKEAQVLKERNLMKNVIKP 840
Query: 829 SACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRG 888
SA VP+ILCTC D A +LLNT LACP++S+LH+PLDE S RF S+V+A+ED+HK
Sbjct: 841 SAIVPEILCTCVDQTFAAILLNTTLACPISSLLHSPLDESSVRFITGSLVSAIEDIHKNE 900
Query: 889 VLYRGVSPDVLMLDKSGHLQ 908
+L+RG SP++LMLD+SG+LQ
Sbjct: 901 ILFRGSSPELLMLDQSGYLQ 920
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| TAIR|locus:2082465 AT3G06270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 190/312 (60%), Positives = 232/312 (74%)
Query: 80 PEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGH 139
P GS + VPS +++ YS LSQRGYYPD+ DK NQD++CI T + + HFFGVFDGH
Sbjct: 38 PLGS--IHVPSPNFDMVYSVLSQRGYYPDSPDKENQDTYCIKTELQGNPNVHFFGVFDGH 95
Query: 140 GEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVT 199
G G QCS FVK ++ E L + ED A S++L N +LH +DDSMSGTTA+T
Sbjct: 96 GVLGTQCSNFVKERVVEMLSEDPTLLEDPEKAYKSAFLRVNEELHDSEIDDSMSGTTAIT 155
Query: 200 VLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQ 259
VLV G IYVAN GDSRAVLA + I+A DLS DQTPFR+DE ERVK GARVL++DQ
Sbjct: 156 VLVVGDKIYVANVGDSRAVLAVKDRNRILAEDLSYDQTPFRKDECERVKACGARVLSVDQ 215
Query: 260 IEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVW 319
+EGLK+P++Q W EE + GDPPRLWV NGMYPGTAFTRS+GD AE+IGV+A PE+ +
Sbjct: 216 VEGLKDPNIQTWANEESEGGDPPRLWVQNGMYPGTAFTRSVGDFTAESIGVIAEPEVSMV 275
Query: 320 ELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDI 379
L+ +H FFV+ASDG+FEFL SQAVVDMV +Y DPRD CAA AESY+LWL++E RTDDI
Sbjct: 276 HLSPNHLFFVVASDGIFEFLPSQAVVDMVGRYADPRDGCAAAAAESYKLWLEHENRTDDI 335
Query: 380 TVIVVHINGLKN 391
T+I+V I L N
Sbjct: 336 TIIIVQIKKLSN 347
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| FB|FBgn0022382 Pka-R2 "cAMP-dependent protein kinase R2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 297 (109.6 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 71/198 (35%), Positives = 106/198 (53%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
KT E+ A + ++ + LFR L Q + +LD M +VQ GD +++QG +GD FYV+ S
Sbjct: 107 KTDEQRARLVESVKNVLLFRSLEKEQMNQVLDAMFERKVQPGDFIIRQGDDGDNFYVIES 166
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
G ++V + N T FGELAL+YN P A+V+A T+G+LWA+ R+
Sbjct: 167 GVYKVYINDKHIN----------TYNHTGLFGELALLYNMPRAATVQAETSGLLWAMDRQ 216
Query: 583 DFRGILM-SEFSNLSSLK-LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGV 640
FR IL+ S F + LL SV +L L + +LAD L S+ G+ I+ +
Sbjct: 217 TFRRILLKSAFRKRKMYEELLNSVPMLKALQNYERMNLADALVSKSYDNGERIIKQGDAA 276
Query: 641 AALYIIQRGQVRITFDAD 658
+Y I+ G V + D D
Sbjct: 277 DGMYFIEEGTVSVRMDQD 294
|
|
| FB|FBgn0000442 Pkg21D "cGMP-dependent protein kinase 21D" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 364 (133.2 bits), Expect = 6.5e-30, P = 6.5e-30
Identities = 124/464 (26%), Positives = 215/464 (46%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
+ K + ++ I+ A+ D+ + + SQ L+D M + AG+ V+++G G YV
Sbjct: 166 YEKDFSDKQQIKDAIMDNDFLKNIDASQVRELVDSMYSKSIAAGEFVIREGEVGAHLYVS 225
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGM-LWAL 579
+GEF VM Q+ K VL + A K +FGELA++YN AS+R ++ +W L
Sbjct: 226 AAGEFAVM--QQGK------VLDKMGAGK--AFGELAILYNCTRTASIRVLSEAARVWVL 275
Query: 580 KREDFRGILM-SEFSNL-SSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMN 637
R F+ I+M + + +S+ LRSV LL L+ L+ +AD L ++AG I+
Sbjct: 276 DRRVFQQIMMCTGLQRIENSVNFLRSVPLLMNLSEELLAKIADVLELEFYAAGTYIIRQG 335
Query: 638 EGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGE 697
+ ++I +G VR+T L+ + EL S G YFGE
Sbjct: 336 TAGDSFFLISQGNVRVT---QKLTPTS---------------PEETELRT-LSRGDYFGE 376
Query: 698 WTLLGEHMGSLTAVAVDD-VVCAILTKEKFDLVVGPLTKISHDDQNS-------KDYSSD 749
L+ E + +A+ V C L ++ F ++G L ++ D K
Sbjct: 377 QALINEDKRTANIIALSPGVECLTLDRDSFKRLIGDLCELKEKDYGDESRKLAMKQAQES 436
Query: 750 IPKKPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLL--RDSENFLSLKRFSKQKV 807
+P + + + LTD+E L + LV +D + +LK K+ +
Sbjct: 437 CRDEPKEQLQ-QEFPDLKLTDLEVVSTLGIGGFGRVELVKAHHQDRVDIFALKCLKKRHI 495
Query: 808 KCLGKEVQVLKEKNLM-KSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--P 864
+E + E+++M S SP C ++ T D + +LL + + ++L
Sbjct: 496 VDTKQEEHIFSERHIMLSSRSPFIC--RLYRTFRDEKYVYMLLEACMGGEIWTMLRDRGS 553
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
++ +A+F V+ A E LH RG++YR + P+ LMLD+ G+++
Sbjct: 554 FEDNAAQFIIGCVLQAFEYLHARGIIYRDLKPENLMLDERGYVK 597
|
|
| UNIPROTKB|E7EPE6 PRKG2 "cGMP-dependent protein kinase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 218 (81.8 bits), Expect = 7.7e-30, Sum P(2) = 7.7e-30
Identities = 60/195 (30%), Positives = 99/195 (50%)
Query: 462 RKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVG 521
RK E+ I AL+ + ++L Q +++CM Q G ++KQG G+ +V+
Sbjct: 150 RKDSSEKKLITDALNKNQFLKRLDPQQIKDMVECMYGRNYQQGSYIIKQGEPGNHIFVLA 209
Query: 522 SGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKR 581
G EV GE ++L + ++FGELA++YN ASV+A+TN WAL R
Sbjct: 210 EGRLEVF------QGE--KLLS--SIPMWTTFGELAILYNCTRTASVKAITNVKTWALDR 259
Query: 582 EDFRGILM--SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEG 639
E F+ I+ ++ + LRSV LL L +L+ + D L + G I+ E
Sbjct: 260 EVFQNIMRRTAQARDEQYRNFLRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEE 319
Query: 640 VAALYIIQRGQVRIT 654
+ +I+ +G+V++T
Sbjct: 320 GSTFFILAKGKVKVT 334
|
|
| ZFIN|ZDB-GENE-030131-4745 si:dkey-121j17.5 "si:dkey-121j17.5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 244 (91.0 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 61/190 (32%), Positives = 103/190 (54%)
Query: 467 EEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFE 526
E + I +A+ + R+L + Q +++D M+ ++ +AGD ++K+G EGD Y+V +GE +
Sbjct: 2 ETSQIVKAIGKNDFLRRLDEEQISMMVDLMKVLDCRAGDEIIKEGTEGDSMYIVAAGELK 61
Query: 527 VMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRG 586
V TQ G R+L FGELA++YN ASV+A++ LW ++R+ +R
Sbjct: 62 V--TQA---GRDLRILSPG-----DMFGELAILYNCKRTASVKAISAVKLWCIERQTYRS 111
Query: 587 ILM--SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALY 644
I+ S+ + L++ L L +QLS + D++ EV F + IV Y
Sbjct: 112 IMTNKSKMKREQLMGFLKTARTLKALNDVQLSKIIDSMEEVRFQDNEVIVREGAEGNTFY 171
Query: 645 IIQRGQVRIT 654
II +G+V +T
Sbjct: 172 IILKGEVLVT 181
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| MGI|MGI:108174 Prkg1 "protein kinase, cGMP-dependent, type I" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 209 (78.6 bits), Expect = 5.5e-29, Sum P(2) = 5.5e-29
Identities = 58/186 (31%), Positives = 90/186 (48%)
Query: 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMAT 530
I+ A+ D+ + L SQ ++DCM VE ++K+G G YV+ G+ EV
Sbjct: 94 IKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVT-- 151
Query: 531 QEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
K G ++ T FGELA++YN A+V+ + N LWA+ R+ F+ I+M
Sbjct: 152 ---KEG-----VKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMR 203
Query: 591 E--FSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQR 648
+ ++ L+SV L LS LAD L E + G+ I+ +II +
Sbjct: 204 TGLIKHTEYMEFLKSVPTFQSLPDEILSKLADVLEETHYENGEYIIRQGARGDTFFIISK 263
Query: 649 GQVRIT 654
GQV +T
Sbjct: 264 GQVNVT 269
|
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| UNIPROTKB|F1RVC8 PRKG2 "cGMP-dependent protein kinase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 218 (81.8 bits), Expect = 6.7e-29, Sum P(3) = 6.7e-29
Identities = 60/195 (30%), Positives = 99/195 (50%)
Query: 462 RKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVG 521
RK E+ I AL+ + ++L Q +++CM Q G ++KQG G+ +V+
Sbjct: 150 RKDSSEKKLITDALNKNQFLKRLDPQQIKDMVECMYGRNFQQGSYIIKQGEPGNHIFVLA 209
Query: 522 SGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKR 581
G EV GE ++L + ++FGELA++YN ASV+A+TN WAL R
Sbjct: 210 EGRLEVF------QGE--KLLS--SIPMWTTFGELAILYNCTRTASVKAITNVKTWALDR 259
Query: 582 EDFRGILM--SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEG 639
E F+ I+ ++ + LRSV LL L +L+ + D L + G I+ E
Sbjct: 260 EVFQNIMRRTAQARDEQYRNFLRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEE 319
Query: 640 VAALYIIQRGQVRIT 654
+ +I+ +G+V++T
Sbjct: 320 GSTFFILAKGKVKVT 334
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| UNIPROTKB|P00516 PRKG1 "cGMP-dependent protein kinase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 205 (77.2 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 57/186 (30%), Positives = 90/186 (48%)
Query: 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMAT 530
I+ A+ D+ + L SQ ++DCM VE ++K+G G YV+ G+ EV
Sbjct: 94 IKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVT-- 151
Query: 531 QEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
K G ++ T FGELA++YN A+V+ + N LWA+ R+ F+ I+M
Sbjct: 152 ---KEG-----VKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMR 203
Query: 591 E--FSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQR 648
+ ++ L+SV L LS LAD L E + G+ I+ +II +
Sbjct: 204 TGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISK 263
Query: 649 GQVRIT 654
G+V +T
Sbjct: 264 GKVNVT 269
|
|
| UNIPROTKB|F1NE85 F1NE85 "cGMP-dependent protein kinase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 209 (78.6 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 58/194 (29%), Positives = 95/194 (48%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K+ + + I+ A+ D+ + L SQ ++DCM VE ++K+G G YV+
Sbjct: 100 KSPQSKELIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMED 159
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
G+ EV K G ++ T FGELA++YN A+V+ + N LWA+ R+
Sbjct: 160 GKVEVT-----KEG-----VKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQ 209
Query: 583 DFRGILMSE--FSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGV 640
F+ I+M + ++ L+SV L LS LAD L E + +G+ I+
Sbjct: 210 CFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYESGEYIIRQGARG 269
Query: 641 AALYIIQRGQVRIT 654
+II +G+V +T
Sbjct: 270 DTFFIISKGKVNVT 283
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SL76 | P2C19_ARATH | 3, ., 1, ., 3, ., 1, 6 | 0.7152 | 1.0 | 0.8299 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3.16 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00016693001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (1049 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 908 | |||
| cd00143 | 254 | cd00143, PP2Cc, Serine/threonine phosphatases, fam | 6e-55 | |
| smart00332 | 252 | smart00332, PP2Cc, Serine/threonine phosphatases, | 1e-47 | |
| pfam00481 | 252 | pfam00481, PP2C, Protein phosphatase 2C | 5e-32 | |
| COG0631 | 262 | COG0631, PTC1, Serine/threonine protein phosphatas | 2e-28 | |
| PLN03145 | 365 | PLN03145, PLN03145, Protein phosphatase 2c; Provis | 5e-22 | |
| cd00038 | 115 | cd00038, CAP_ED, effector domain of the CAP family | 8e-21 | |
| smart00100 | 120 | smart00100, cNMP, Cyclic nucleotide-monophosphate | 1e-16 | |
| pfam00027 | 91 | pfam00027, cNMP_binding, Cyclic nucleotide-binding | 3e-16 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 6e-14 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 2e-12 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-11 | |
| cd00038 | 115 | cd00038, CAP_ED, effector domain of the CAP family | 2e-11 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 2e-11 | |
| COG0664 | 214 | COG0664, Crp, cAMP-binding proteins - catabolite g | 4e-11 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 3e-10 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 4e-10 | |
| PTZ00224 | 381 | PTZ00224, PTZ00224, protein phosphatase 2C; Provis | 5e-10 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-09 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 5e-09 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 2e-08 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 3e-08 | |
| pfam00027 | 91 | pfam00027, cNMP_binding, Cyclic nucleotide-binding | 4e-08 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 4e-08 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 1e-07 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 1e-07 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 2e-07 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 3e-07 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 5e-07 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 5e-07 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 7e-07 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 8e-07 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 2e-06 | |
| smart00100 | 120 | smart00100, cNMP, Cyclic nucleotide-monophosphate | 3e-06 | |
| COG0664 | 214 | COG0664, Crp, cAMP-binding proteins - catabolite g | 3e-06 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 3e-06 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 3e-06 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 3e-06 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 4e-06 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 6e-06 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 6e-06 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 6e-06 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 6e-06 | |
| TIGR03896 | 317 | TIGR03896, cyc_nuc_ocin, bacteriocin-type transpor | 1e-05 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-05 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 2e-05 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 3e-05 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 5e-05 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 5e-05 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 5e-05 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 6e-05 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 6e-05 | |
| TIGR03896 | 317 | TIGR03896, cyc_nuc_ocin, bacteriocin-type transpor | 8e-05 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 1e-04 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 1e-04 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 1e-04 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 2e-04 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 3e-04 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 5e-04 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 5e-04 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 6e-04 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 6e-04 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 6e-04 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 8e-04 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 0.001 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 0.001 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 0.001 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 0.001 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 0.001 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 0.001 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 0.002 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 0.002 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 0.002 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 0.002 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 0.002 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 0.002 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 0.002 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 0.002 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 0.003 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 0.003 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 0.004 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 0.004 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 0.004 |
| >gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity | Back alignment and domain information |
|---|
Score = 190 bits (485), Expect = 6e-55
Identities = 96/286 (33%), Positives = 136/286 (47%), Gaps = 55/286 (19%)
Query: 112 KANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFH-----E 166
K N+D+ I ++D FGVFDGHG G +F + L E LL + E
Sbjct: 13 KTNEDAVVIKPNLN-NEDGGLFGVFDGHG--GHAAGEFASKLLVEELLEELEETLTLSEE 69
Query: 167 DAVDACHSSYLTTNSQLH---ADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERR 223
D +A ++L + ++ D DD+ SGTTAV L+RG +YVAN GDSRAVL R
Sbjct: 70 DIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLC-RN 128
Query: 224 GKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPR 283
G+ AV L+ D P E+E ER++ +G RV
Sbjct: 129 GE---AVQLTKDHKPVNEEERERIEKAGGRV----------------------------S 157
Query: 284 LWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQA 343
G A TR++GD GV A P++ V +LT D F +LASDG+++ LS+Q
Sbjct: 158 NGRVPG---VLAVTRALGDF-DLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQE 213
Query: 344 VVDMVAKYK---DPRDACAAIVAESYRLWLQYETRTDDITVIVVHI 386
VD+V D ++A +V + R D+ITV+VV +
Sbjct: 214 AVDIVRSELAKEDLQEAAQELVDLALRRG-----SHDNITVVVVRL 254
|
Length = 254 |
| >gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 1e-47
Identities = 100/297 (33%), Positives = 149/297 (50%), Gaps = 60/297 (20%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKL 154
LRY S +G K +D+ I S FFGVFDGHG G++ ++F+ + L
Sbjct: 9 LRYGLSSMQGV-----RKPMEDAHVITPDL--SDSGGFFGVFDGHG--GSEAAKFLSKNL 59
Query: 155 CENLLRNNKFH----EDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVA 210
E L ED +A ++L+T+ ++ ++ +++SG+TAV L+ G +YVA
Sbjct: 60 PEILAEELIKEKDELEDVEEALRKAFLSTDEEILEEL--EALSGSTAVVALISGNKLYVA 117
Query: 211 NSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQC 270
N GDSRAVL R GK AV L+ D P EDE R++ +G
Sbjct: 118 NVGDSRAVLC-RNGK---AVQLTEDHKPSNEDERARIEAAGG------------------ 155
Query: 271 WGTEEGDDGDPPRLWVPNGMYPGT-AFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFV 329
+V NG G A +R+IGD V A P++ V ELT F +
Sbjct: 156 --------------FVINGRVNGVLALSRAIGDF-FLKPYVSAEPDVTVVELTEKDDFLI 200
Query: 330 LASDGVFEFLSSQAVVDMVAKY--KDPRDACAAIVAESYRLWLQYETRTDDITVIVV 384
LASDG+++ LS+Q VVD+V K+ KDP++A ++ + L ++ D+ITV+VV
Sbjct: 201 LASDGLWDVLSNQEVVDIVRKHLSKDPKEAAKRLIDLA----LARGSK-DNITVVVV 252
|
The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252 |
| >gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 5e-32
Identities = 80/248 (32%), Positives = 112/248 (45%), Gaps = 44/248 (17%)
Query: 129 DDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHE-DAVDACHSSYLTTNSQL--HA 185
FF VFDGHG G+Q +++ + L L F D +DA S+L + +L A
Sbjct: 33 SFGFFAVFDGHG--GSQAAKYAGKHLETILALRRSFLTLDKLDALRKSFLEADEELRSDA 90
Query: 186 DVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELE 245
+D SG+TAV L+RG+ +YVAN GDSRAVL R G I L+ D P EDE
Sbjct: 91 ANHEDLSSGSTAVVALIRGQKLYVANVGDSRAVLC-RNGNAIKQ--LTEDHKPSNEDERR 147
Query: 246 RVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGD--- 302
R+ G G R NG+ A +R+ GD
Sbjct: 148 RI---------------------------RGAGGFVSRNGRVNGVL---AVSRAFGDFEL 177
Query: 303 SIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMV---AKYKDPRDACA 359
+ V A P++ ++T F +LASDG+++ LS Q VVD+V P +A
Sbjct: 178 KKGKPQPVSAEPDVTSHKITESDEFLILASDGLWDVLSDQEVVDIVRSELSDGSPMEAAE 237
Query: 360 AIVAESYR 367
+V E+
Sbjct: 238 KLVDEAIA 245
|
Protein phosphatase 2C is a Mn++ or Mg++ dependent protein serine/threonine phosphatase. Length = 252 |
| >gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 2e-28
Identities = 78/314 (24%), Positives = 119/314 (37%), Gaps = 66/314 (21%)
Query: 88 VPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCS 147
S L+ + LS G N+D+F I P F V DG G G
Sbjct: 1 SSSGILSLKVAGLSDVGTVRKH----NEDAFLI-KPNENGNLLLLFAVADGMG--GHAAG 53
Query: 148 QFVKRKLCENLLR-----NNKFHEDAVDAC-HSSYLTTNSQLHADVL---DDSMSGTTAV 198
+ + E L R N ++++ + L N + + D GTT V
Sbjct: 54 EVASKLAVEALARLFDETNFNSLNESLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLV 113
Query: 199 TVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLD 258
+L+RG +YVAN GDSRA L R E+ L+ D + E
Sbjct: 114 LLLIRGNKLYVANVGDSRAYL--LRDGELKQ--LTEDHSLVNRLEQRG------------ 157
Query: 259 QIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVV 318
I T E P R A TR++GD P+I
Sbjct: 158 II------------TPEEARSHPRRN----------ALTRALGDFDL------LEPDITE 189
Query: 319 WELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDD 378
EL F +L SDG+++ +S +VD++ + P++A ++ + L+ D+
Sbjct: 190 LELEPGD-FLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELA----LEGGGP-DN 243
Query: 379 ITVIVVHINGLKNT 392
ITV++V +NG T
Sbjct: 244 ITVVLVRLNGEGET 257
|
Length = 262 |
| >gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional | Back alignment and domain information |
|---|
Score = 98.8 bits (246), Expect = 5e-22
Identities = 87/300 (29%), Positives = 130/300 (43%), Gaps = 80/300 (26%)
Query: 132 FFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQ-LHADVLDD 190
F+GVFDGHG G + F L ++ + F + S++L T++ A LD
Sbjct: 105 FYGVFDGHG--GKHAADFACYHLPRFIVEDEDFPREIEKVVSSAFLQTDTAFAEACSLDA 162
Query: 191 SM-SGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKL 249
S+ SGTTA+ LV GR++ VAN+GD RAVL RRGK A+++S D P E +R++
Sbjct: 163 SLASGTTALAALVVGRSLVVANAGDCRAVLC-RRGK---AIEMSRDHKPMCSKERKRIEA 218
Query: 250 SG--------------ARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTA 295
SG AR L +EG+K G DG P
Sbjct: 219 SGGYVYDGYLNGQLNVARALGDWHMEGMK-----------GSDGGP-------------- 253
Query: 296 FTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDM----VAKY 351
+ A PE++ +LT + F ++ DG+++ SQ VD + ++
Sbjct: 254 --------------LSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEH 299
Query: 352 KDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQV 411
DP +V E+ + D++ V+VV QS PP L P P+V
Sbjct: 300 NDPVMCSKELVDEALK-----RKSGDNLAVVVVCF---------QSQPPPN-LVAPRPRV 344
|
Length = 365 |
| >gnl|CDD|237999 cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 8e-21
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF L D + L D ++ AG+++++QG D Y+V SG EV E+ ++
Sbjct: 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIV 60
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILM 589
L FGELAL+ N P A+VRA+T+ L L R DFR +L
Sbjct: 61 GFLGPG-----DLFGELALLGNGPRSATVRALTDSELLVLPRSDFRRLLQ 105
|
In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels. Length = 115 |
| >gnl|CDD|197516 smart00100, cNMP, Cyclic nucleotide-monophosphate binding domain | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 1e-16
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+ L + L D ++ V AG+++++QG GD FY++ SGE EV E+ ++
Sbjct: 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIIVSGEVEVYKVLEDGEEQIV 60
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILM 589
L FGELAL+ N AS AV L L R DFR L
Sbjct: 61 GTLGP-----GDFFGELALLTNSRRAASAAAVAL-ELATLLRIDFRDFLQ 104
|
Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases. Length = 120 |
| >gnl|CDD|215664 pfam00027, cNMP_binding, Cyclic nucleotide-binding domain | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 3e-16
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 498 RVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELA 557
+ G+++ ++G D Y+V SG+ +V E+ ++ L FGELA
Sbjct: 1 LRSFKKGEVIFREGDPADSLYIVLSGKVKVYKLDEDGREQILAFLGPG-----DFFGELA 55
Query: 558 LMYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
L+ +P A+V A+T+ L + REDF +L
Sbjct: 56 LLGGEPRSATVVALTDSELLVIPREDFLELLEQ 88
|
Length = 91 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 6e-14
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC---TCADSM 843
LV ++ +LK K+ + G++ + EK +++ P I+ T D
Sbjct: 11 LVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC----NHPFIVKLYRTFKDKK 66
Query: 844 HAGLLLNTYLACPLASILHTP--LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901
+ +L+ L L +IL DE +ARF A VV A E LH RG++YR + P+ L+L
Sbjct: 67 YIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL 126
Query: 902 DKSGHL 907
D +G++
Sbjct: 127 DSNGYV 132
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.5 bits (166), Expect = 2e-12
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 786 GLVLL---RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842
G VLL +D+ ++K K+K+ + L E+N++ ++ V ++
Sbjct: 7 GKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIV-KLHYAFQTE 65
Query: 843 MHAGLLLNTYLAC-PLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899
L+L Y L S L E+ ARF AA +V ALE LH G++YR + P+ +
Sbjct: 66 EKLYLVL-EYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENI 124
Query: 900 MLDKSGHLQ 908
+LD GH++
Sbjct: 125 LLDADGHIK 133
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 815 QVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA---CP---LASILHT--PLD 866
QVL E++++ V N YL P LAS+L LD
Sbjct: 39 QVLTERDILSQAQSPYVVKLYYSFQGKK-------NLYLVMEYLPGGDLASLLENVGSLD 91
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E AR A +V ALE LH G+++R + PD +++D +GHL+
Sbjct: 92 EDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLK 133
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|237999 cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 2e-11
Identities = 33/121 (27%), Positives = 44/121 (36%), Gaps = 21/121 (17%)
Query: 606 LLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANV 665
L S L +L LAD L E F AG+ I+ + +LYI+ G V + + V
Sbjct: 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIV 60
Query: 666 CSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEK 725
L G FGE LLG S T A+ D +L +
Sbjct: 61 GFLG---------------------PGDLFGELALLGNGPRSATVRALTDSELLVLPRSD 99
Query: 726 F 726
F
Sbjct: 100 F 100
|
In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels. Length = 115 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 2e-11
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
LV + S + +LK SK K+ L + VL EK +++S+ V + + D +
Sbjct: 19 LVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLV-NLYGSFQDDSNLY 77
Query: 847 LLLNTYLACPLASILHTP--LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904
L++ L S L E ARF AA VV ALE LH ++YR + P+ L+LD
Sbjct: 78 LVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSD 137
Query: 905 GHLQ 908
G+++
Sbjct: 138 GYIK 141
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|223736 COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 4e-11
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 474 ALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE 533
AL ++ L L +L ++ ++ G+++ +G E D Y++ SG ++
Sbjct: 1 ALKENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKL--YANT 58
Query: 534 KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS--- 590
++G +L FGELAL+ P AS A+T+ + + R+DF +L
Sbjct: 59 EDGR-EIILGFLGPG--DFFGELALLGGDPRSASAVALTDVEVLEIPRKDFLELLAESPK 115
Query: 591 ---EFSNLSSLKLLRSVDLLSRLTILQLS-HLADTLSEVSFSAGQ 631
L + +L ++++ LS L + LA L + G
Sbjct: 116 LALALLRLLARRLRQALERLSLLARKDVEERLARFLLNLGRRLGI 160
|
Length = 214 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 785 IGLVLL---RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841
G V L R SE++ +LK + +V L +E V EK ++K VS + ++ T D
Sbjct: 14 FGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFII-RLFWTEHD 72
Query: 842 SMHAGLLLNTYLACPLASILHTP--LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899
+L+ L S L + F A+ +V ALE LH + ++YR + P+ +
Sbjct: 73 QRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENI 132
Query: 900 MLDKSGHLQ 908
+LDK GH++
Sbjct: 133 LLDKEGHIK 141
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 4e-10
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS-PSACVPQILCTCADSMHA 845
LV L+ + +LK K+++ K +VL E+ ++ ++ P +P + + +
Sbjct: 19 LVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHP--FLPTLYASFQTETYL 76
Query: 846 GLLLNTYLACP---LASILHTP----LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
L++ Y CP L +L L E+ ARF AA V+ ALE LH G++YR + P+
Sbjct: 77 CLVM-DY--CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPEN 133
Query: 899 LMLDKSGHLQ 908
++L +SGH+
Sbjct: 134 ILLHESGHIM 143
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 5e-10
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 59/230 (25%)
Query: 132 FFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDS 191
FFGVFDGH +CSQ++ R + L + + D + L ++ + +D
Sbjct: 50 FFGVFDGHV--NDECSQYLARAWPQALEKEPEPMTD--ERMEELCL----EIDEEWMDSG 101
Query: 192 MSGTTAVT--VLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKL 249
G + T V+++ + V N GDSR VL R GK + A + D P E +R++
Sbjct: 102 REGGSTGTFCVIMKDVHLQVGNVGDSR-VLVCRDGKLVFATE---DHKPNNPGERQRIEA 157
Query: 250 SGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIG 309
G RV+ + V DGD A +R+ GD + G
Sbjct: 158 CGGRVV---------SNRV---------DGD-------------LAVSRAFGDRSFKVKG 186
Query: 310 --------VVANPEI--VVWELTNDHPFFVLASDGVFE-FLSSQAVVDMV 348
V+A P++ + + +ND F +LA DGVFE S++ VV V
Sbjct: 187 TGDYLEQKVIAVPDVTHLTCQ-SND--FIILACDGVFEGNFSNEEVVAFV 233
|
Length = 381 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 1e-09
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 783 SEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842
S + L +++ ++K K+++ K V EK ++ ++ + ++ T D
Sbjct: 15 STVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE 74
Query: 843 MHAGLLLNTYLA---CP---LASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGV 894
N Y P L + LDE+ RF AA ++ ALE LH +G+++R +
Sbjct: 75 ------ENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDL 128
Query: 895 SPDVLMLDKSGHLQ 908
P+ ++LDK H++
Sbjct: 129 KPENILLDKDMHIK 142
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 5e-09
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC-----------VPQILCTCA 840
D+ ++K K+++K E L E+ ++ VS C P L
Sbjct: 17 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 76
Query: 841 DSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900
D M+ G L + +L+ H E RF AA ++ LE +H R V+YR + P ++
Sbjct: 77 DLMNGGDL-HYHLS------QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 129
Query: 901 LDKSGHLQ 908
LD+ GH++
Sbjct: 130 LDEHGHVR 137
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 29/129 (22%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 783 SEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842
E+ +V + + + ++K K + +E++++ S+S S +PQ+ D
Sbjct: 15 GEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIL-SISNSPWIPQLQYAFQDK 73
Query: 843 MHAGLLLNTYLACPLASILHT---PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899
+ L++ L S+L+ DE A+F A +V A+ +H+ G ++R + P+ +
Sbjct: 74 DNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENV 133
Query: 900 MLDKSGHLQ 908
++D++GH++
Sbjct: 134 LIDRTGHIK 142
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 3e-08
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 791 RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850
R + ++ ++K K + + V E+ +M S V ++ + + L++
Sbjct: 18 RSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVME 77
Query: 851 TYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
AS++ T L E A+ A VV +EDLH+RG+++R + P+ L++D++GHL+
Sbjct: 78 YLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLK 137
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|215664 pfam00027, cNMP_binding, Cyclic nucleotide-binding domain | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 4e-08
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 21/104 (20%)
Query: 624 EVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSK 683
SF G+ I + +LYI+ G+V++ + + L
Sbjct: 1 LRSFKKGEVIFREGDPADSLYIVLSGKVKVYKLDEDGREQILAFLG-------------- 46
Query: 684 ELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFD 727
G +FGE LLG S T VA+ D ++ +E F
Sbjct: 47 -------PGDFFGELALLGGEPRSATVVALTDSELLVIPREDFL 83
|
Length = 91 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 4e-08
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843
E+ LV + S+ ++K SK ++ +E+++M + + S V Q+ C D
Sbjct: 58 EVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLFCAFQDDK 116
Query: 844 HAGLLLNTYLACPLASILHT-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+ +++ L +++ + E+ A+F A VV AL+ +H G+++R V PD ++LD
Sbjct: 117 YLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD 176
Query: 903 KSGHLQ 908
K GHL+
Sbjct: 177 KHGHLK 182
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 1e-07
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 783 SEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842
E+ LV +D+ ++K K + + V E++++ + + S + ++ + D
Sbjct: 15 GEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL-ADADSPWIVKLYYSFQDE 73
Query: 843 MH---------AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRG 893
H G L+N L E++ARF A +V AL+ +HK G ++R
Sbjct: 74 EHLYLVMEYMPGGDLMN------LLIRKDV-FPEETARFYIAELVLALDSVHKLGFIHRD 126
Query: 894 VSPDVLMLDKSGHL 907
+ PD +++D GH+
Sbjct: 127 IKPDNILIDADGHI 140
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 1e-07
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC-----------VPQILCTCA 840
D+ ++K K+++K E L E+ ++ VS C P LC
Sbjct: 17 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFIL 76
Query: 841 DSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900
D M+ G L + +L+ H E+ RF A ++ LE +H R V+YR + P ++
Sbjct: 77 DLMNGGDL-HYHLS------QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANIL 129
Query: 901 LDKSGHLQ 908
LD+ GH++
Sbjct: 130 LDEHGHVR 137
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQ-VLKEKNLMKSV 826
L+D E + L + + + + + + ++K K+++ + K+VQ V +EK+++ +
Sbjct: 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKM-KQVQHVAQEKSILMEL 75
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILHT----PLDEQSARFCAASVVAALE 882
S V ++C+ D LL + L + L P D A+F A +V A E
Sbjct: 76 SHPFIV-NMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPND--VAKFYHAELVLAFE 132
Query: 883 DLHKRGVLYRGVSPDVLMLDKSGHLQ 908
LH + ++YR + P+ L+LD GH++
Sbjct: 133 YLHSKDIIYRDLKPENLLLDNKGHVK 158
|
Length = 329 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 3e-07
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP--------QI 835
E+ +R + + K+ K+++K E L EK +++ V+ V
Sbjct: 15 EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDA 74
Query: 836 LCTCADSMHAG-LLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGV 894
LC M+ G L + Y ++ + DEQ A F AA + LEDL + ++YR +
Sbjct: 75 LCLVLTIMNGGDLKFHIY------NMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDL 128
Query: 895 SPDVLMLDKSGHLQ 908
P+ ++LD GH++
Sbjct: 129 KPENILLDDRGHIR 142
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACV--------PQI 835
E+ +R + + KR K+++K E L EK +++ V+ V
Sbjct: 15 EVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDA 74
Query: 836 LCTCADSMHAG-LLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGV 894
LC M+ G L + Y ++ + +E+ A F AA ++ LEDLH+ +YR +
Sbjct: 75 LCLVLTIMNGGDLKFHIY------NMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDL 128
Query: 895 SPDVLMLDKSGHLQ 908
P+ ++LD GH++
Sbjct: 129 KPENILLDDYGHIR 142
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 5e-07
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACV--------PQI 835
E+ ++ + + K+ K+++K E L EK +++ VS V
Sbjct: 8 EVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDD 67
Query: 836 LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVS 895
LC M+ G L + ++ E A F AA ++ LE LH+R ++YR +
Sbjct: 68 LCLVMTLMNGG-----DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLK 122
Query: 896 PDVLMLDKSGHLQ 908
P+ ++LD G+++
Sbjct: 123 PENVLLDDHGNVR 135
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 7e-07
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 799 LKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLA 858
+K K+ K K+ +E +++ +S + +++ D H L++ L
Sbjct: 29 VKILKKRSEKS-KKDQTARREIRILRRLS-HPNIVRLIDAFEDKDHLYLVMEYCEGGDLF 86
Query: 859 SIL--HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
L PL E A+ A ++ LE LH G+++R + P+ ++LD++G +
Sbjct: 87 DYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVV 137
|
Length = 260 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 8e-07
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 791 RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP--------QILCTCADS 842
R + + K+ K+++K E L EK +++ V+ V LC
Sbjct: 22 RATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81
Query: 843 MHAG-LLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901
M+ G L + Y ++ + DE+ A F AA + LEDLH+ ++YR + P+ ++L
Sbjct: 82 MNGGDLKFHIY------NMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL 135
Query: 902 DKSGHLQ 908
D GH++
Sbjct: 136 DDYGHIR 142
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 2e-06
Identities = 40/169 (23%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 741 QNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLK 800
+ +K+ + + + + I+ L ++ D + K + E+ LV + S+ ++K
Sbjct: 16 RKNKNIDNFLSRYEKAAEKITKL-RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMK 74
Query: 801 RFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASI 860
SK ++ +E+++M + + S + Q+ D + +++ L ++
Sbjct: 75 LLSKFEMIKRSDSAFFWEERDIM-AHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNL 133
Query: 861 LHT-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
+ + E+ ARF A VV AL+ +H G ++R V PD ++LDKSGHL+
Sbjct: 134 MSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 182
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|197516 smart00100, cNMP, Cyclic nucleotide-monophosphate binding domain | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 3e-06
Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 22/134 (16%)
Query: 606 LLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANV 665
L L +L LAD L V + AG+ I+ + + YII G+V +
Sbjct: 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIIVSGEVEVYKVL-------- 52
Query: 666 CSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEK 725
ED Q L G +FGE LL + + A + A L +
Sbjct: 53 ---------EDGEEQIVGTL----GPGDFFGELALL-TNSRRAASAAAVALELATLLRID 98
Query: 726 FDLVVGPLTKISHD 739
F + L ++
Sbjct: 99 FRDFLQLLPELPQL 112
|
Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases. Length = 120 |
| >gnl|CDD|223736 COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 21/128 (16%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
L+ LL+ L L LA L G+ + E +LYII G V++
Sbjct: 1 ALKENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKL------ 54
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCA 719
+DG + G +FGE LLG S +AVA+ DV
Sbjct: 55 ------------YANTEDGREIILGFL---GPGDFFGELALLGGDPRSASAVALTDVEVL 99
Query: 720 ILTKEKFD 727
+ ++ F
Sbjct: 100 EIPRKDFL 107
|
Length = 214 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 3e-06
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
DE ARF AA +V L+ LH+RG++YR + D ++LD GH++
Sbjct: 93 FDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIK 136
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843
E+ LV + + ++K SK ++ +E+++M + + S V Q+ D
Sbjct: 58 EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLFYAFQDDR 116
Query: 844 HAGLLLNTYLACPLASILHT-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+ +++ L +++ + E+ ARF A VV AL+ +H G ++R V PD ++LD
Sbjct: 117 YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 176
Query: 903 KSGHLQ 908
KSGHL+
Sbjct: 177 KSGHLK 182
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 3e-06
Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 791 RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850
+D+ ++LKR K + L + VL E++++ + + S + ++L D + L +
Sbjct: 23 KDTGEIVALKRMKKSLLFKLNEVRHVLTERDIL-TTTKSEWLVKLLYAFQDDEYLYLAME 81
Query: 851 TYLACPLASILHTP--LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
++L+ L E ARF A + A++ LH+ G ++R + P+ ++D SGH++
Sbjct: 82 YVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIK 141
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 4e-06
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 788 VLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC----TCADSM 843
V RD++ ++K +KQK G VL E+ +++ ++ L + D
Sbjct: 19 VQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH-----PFLVNLWYSFQDEE 73
Query: 844 HAGLLLNTYLACPLA-SILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901
+ L+++ L L + E+ +F +V ALE LH +G+++R + PD ++L
Sbjct: 74 NMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL 133
Query: 902 DKSGHL 907
D+ GH+
Sbjct: 134 DEQGHV 139
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 6e-06
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 799 LKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA---C 855
+K K+K+K ++L+E ++K + + ++ D YL C
Sbjct: 29 IKVIKKKKIK--KDRERILREIKILKKLK-HPNIVRLYDVFEDE------DKLYLVMEYC 79
Query: 856 P---LASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
L +L L E ARF +++ALE LH +G+++R + P+ ++LD+ GH+
Sbjct: 80 EGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHV 136
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 6e-06
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP--------QI 835
E+ +R + + K+ K+++K E L EK +++ V+ V
Sbjct: 15 EVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDA 74
Query: 836 LCTCADSMHAG-LLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGV 894
LC M+ G L + Y + +E A F AA + LEDLH+ ++YR +
Sbjct: 75 LCLVLTLMNGGDLKFHIY------HMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDL 128
Query: 895 SPDVLMLDKSGHLQ 908
P+ ++LD GH++
Sbjct: 129 KPENILLDDHGHIR 142
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 6e-06
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E+ ARF A +V+ALE LH R V+YR + + LMLDK GH++
Sbjct: 94 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 135
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 6e-06
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
DE ARF AA ++ L+ LHK+G++YR + D ++LDK GH++
Sbjct: 94 DEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIK 136
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|234384 TIGR03896, cyc_nuc_ocin, bacteriocin-type transport-associated protein | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 1e-05
Identities = 39/199 (19%), Positives = 82/199 (41%), Gaps = 22/199 (11%)
Query: 432 IRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHV 491
RA + ++N + HR+ + + + L F+F +L +S
Sbjct: 105 FAAHFYRAIAIKLALQIQNQNHQL-----HRRNGADSEPLRKVL---FIFGELHESDVAW 156
Query: 492 LLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLS 551
++ ++ AG I++ +GG D Y++ GE + + + EV ++ +
Sbjct: 157 MMASGTPQKLPAGTILIHEGGTVDALYILLYGEASLSISPDGPGREVG------SSRRGE 210
Query: 552 SFGELALMY-NKPLQASVRAVTNGMLWALKREDFRGILMSE-------FSNLSSLKLLRS 603
GE + + P A+V+A+ N +L A+ ++ L + + ++SL RS
Sbjct: 211 ILGETPFLNGSLPGTATVKAIENSVLLAIDKQQLAAKLQQDVGFASRFYRVIASLLSQRS 270
Query: 604 VDLLSRLTILQLSHLADTL 622
D +S + +L + L
Sbjct: 271 RDQVSSRGYARRVYLREGL 289
|
Members of this protein family are uncharacterized and contain two copies of the cyclic nucleotide-binding domain pfam00027. Members are restricted to select cyanobacteria but are found regularly in association with a transport operon that, in turn, is associated with the production of putative bacteriocins. The models describing the transport operon are TIGR03794, TIGR03796, and TIGR03797. Length = 317 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E ARF A +V+AL LH V+YR + + LMLDK GH++
Sbjct: 94 EDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIK 135
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
DE +RF AA V AL LH+ GV+YR + D ++LD GH
Sbjct: 94 DEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGH 134
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 3e-05
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
DE ARF AA + +AL LH +G++YR + D ++LD GH
Sbjct: 93 FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGH 134
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 5e-05
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E R A +V AL+ LH+ G++YR + + ++LD GH+
Sbjct: 103 TESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHV 144
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 5e-05
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E +A F + + ALE LH++G++YR + P+ ++LD GH++
Sbjct: 99 EDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVK 140
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 5e-05
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
L E+ ARF +A + AL LH+RG++YR + D ++LD GH++
Sbjct: 93 LPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIK 136
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 6e-05
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
L E+ ARF AA + AL LH+RG++YR + D ++LD GH++
Sbjct: 93 LPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIK 136
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 6e-05
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEV-QVLKEKNLMKSVSPSACVPQILCTCADSMHA 845
V +D+ ++K SK K KEV + E+N++ + + +
Sbjct: 11 QVRKKDTRRIYAMKVLSK-KEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS 69
Query: 846 GLLLNTYLACPLASILHTPLD----EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901
L L T H + E A+F A +V ALE LHK ++YR + P+ ++L
Sbjct: 70 DLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL 129
Query: 902 DKSGHL 907
D +GH+
Sbjct: 130 DATGHI 135
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|234384 TIGR03896, cyc_nuc_ocin, bacteriocin-type transport-associated protein | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 8e-05
Identities = 38/193 (19%), Positives = 73/193 (37%), Gaps = 32/193 (16%)
Query: 495 CMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRV-LQRYTAEKLSSF 553
QR E+ AG ++++G D +++ G F V Q E N L R + ++
Sbjct: 8 GHQR-EIAAGTTLIEEGKAADFLFILLDGTFTVTTPQPEDNPLTRAFELARLSRGEI--V 64
Query: 554 GELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSE----------FSNLSSLKLLRS 603
GE++L+ +P A+++AV + ++ + L S+ + +L++
Sbjct: 65 GEMSLLETRPPVATIKAVPKSRVMSIPVGELAAKLQSDVGFAAHFYRAIAIKLALQIQNQ 124
Query: 604 VDLLSRLTILQLSHLADTL------------------SEVSFSAGQTIVNMNEGVAALYI 645
L R L L + AG +++ V ALYI
Sbjct: 125 NHQLHRRNGADSEPLRKVLFIFGELHESDVAWMMASGTPQKLPAGTILIHEGGTVDALYI 184
Query: 646 IQRGQVRITFDAD 658
+ G+ ++ D
Sbjct: 185 LLYGEASLSISPD 197
|
Members of this protein family are uncharacterized and contain two copies of the cyclic nucleotide-binding domain pfam00027. Members are restricted to select cyanobacteria but are found regularly in association with a transport operon that, in turn, is associated with the production of putative bacteriocins. The models describing the transport operon are TIGR03794, TIGR03796, and TIGR03797. Length = 317 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 45.5 bits (106), Expect = 1e-04
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 798 SLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPL 857
+LK +K+ + + L+E ++ S++ + ++ D L++ L
Sbjct: 26 ALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSL 85
Query: 858 ASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
+L PL E A F A +++ALE LH +G+++R + P+ ++LD+ G
Sbjct: 86 EDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR 139
|
Length = 384 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-04
Identities = 30/128 (23%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843
E+ LV +D+ + ++K+ K ++ + V E++++ + + V ++ + D
Sbjct: 16 EVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-ADNPWVVKLYYSFQDEN 74
Query: 844 HAGLLLNTYLAC-PLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900
+ L++ YL + ++L E+ RF A + A++ +HK G ++R + PD L+
Sbjct: 75 YLYLIME-YLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLL 133
Query: 901 LDKSGHLQ 908
LD GH++
Sbjct: 134 LDAKGHIK 141
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 1e-04
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
L E+ ARF +A + AL LH+RG++YR + D ++LD GH++
Sbjct: 93 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK 136
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 2e-04
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
D ARF A ++ ALE+LHK V+YR + P+ ++LD GH+
Sbjct: 90 FDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHI 132
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 3e-04
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E RF A V A+E +HK G ++R + PD +++D+ GH++
Sbjct: 100 EDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIK 141
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 5e-04
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 865 LDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQ 908
E ARF A +V+AL+ LH ++ V+YR + + LMLDK GH++
Sbjct: 92 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIK 136
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 5e-04
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E A F AA VV L+ LH+ ++YR + D L+LD G ++
Sbjct: 99 SEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVK 141
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
++ L+ P +E R+ AA +V AL+ LH+ G++ R ++P+ ++LD GH+Q
Sbjct: 76 ISKFLNIP-EECVKRW-AAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQ 125
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 6e-04
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E A F AA + L LH +G++YR + D +MLD GH++
Sbjct: 100 EPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIK 141
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 6e-04
Identities = 22/125 (17%), Positives = 52/125 (41%), Gaps = 7/125 (5%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
L + + +++K K+ ++L+E ++K ++ + ++ D H
Sbjct: 11 LARDKKTGKKVAIKIIKKEDSS--SLLEELLREIEILKKLN-HPNIVKLYGVFEDENHLY 67
Query: 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPD-VLMLD 902
L++ L +L L E ++ LE LH G+++R + P+ +L+
Sbjct: 68 LVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS 127
Query: 903 KSGHL 907
+G +
Sbjct: 128 DNGKV 132
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 8e-04
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E ARF A + A+E +HK G ++R + PD +++D+ GH++
Sbjct: 100 EDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIK 141
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 31/142 (21%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829
D E K + E+ +V ++ +E ++K +K ++ + +E+N++ +
Sbjct: 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVN-GDC 60
Query: 830 ACVPQILCTCADSMHAGLLLNTYLACPLASIL---HTPLDEQSARFCAASVVAALEDLHK 886
+ + D + L+++ Y+ L ++L L E ARF A +V A+ +H+
Sbjct: 61 QWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ 120
Query: 887 RGVLYRGVSPDVLMLDKSGHLQ 908
++R + PD ++LD +GH++
Sbjct: 121 LHYVHRDIKPDNVLLDMNGHIR 142
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 0.001
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLK------RFSKQKVKCLGKEVQVLKEKNLM 823
D E K + E+ LV +D+ + ++K K++V + E +L E +
Sbjct: 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-- 59
Query: 824 KSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAAL 881
S V ++ + D ++ L++ + ++L L E+ +F A V A+
Sbjct: 60 -----SLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAI 114
Query: 882 EDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
+ +H+ G ++R + PD L+LD GH++
Sbjct: 115 DSIHQLGFIHRDIKPDNLLLDSKGHVK 141
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E A F A +++ LE LH+R ++YR + P+ ++LD G+++
Sbjct: 94 FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVR 137
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
LV +++ ++K+ +KQ + + QV E++++ + + + V + C+ H
Sbjct: 19 LVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDIL-TFAENPFVVSMFCSFETKRHLC 77
Query: 847 LLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904
+++ A++L L AR A V ALE LH G+++R + PD L++
Sbjct: 78 MVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSM 137
Query: 905 GHLQ 908
GH++
Sbjct: 138 GHIK 141
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E ARF A + A+E +HK G ++R + PD +++D+ GH++
Sbjct: 100 EDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIK 141
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
L E ARF A +V A++ +H+ G ++R + PD ++LDK+GH++
Sbjct: 99 LPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIR 142
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.002
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
D A F AA ++ L+ LH +G++YR + D ++LD GH++
Sbjct: 93 FDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIK 136
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 0.002
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 857 LASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
+ S+LH DE+ A + V AL+ LH+ G+++R + PD +++ GH++
Sbjct: 91 VKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIK 144
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E ARF AA + +AL LH ++YR + P+ ++LD GH+
Sbjct: 95 EPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHV 135
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E ARF AA + +AL LH ++YR + P+ ++LD GH+
Sbjct: 95 EPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHI 135
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.002
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E RF + ++ ALE LHK G++YR + + ++LD GH+
Sbjct: 104 EDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHV 144
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 29/142 (20%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829
D E K + E+ +V L++++ ++K +K ++ + +E++++ + +
Sbjct: 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDN 60
Query: 830 ACVPQILCTCADSMHAGLLLNTYLACPLASIL---HTPLDEQSARFCAASVVAALEDLHK 886
+ + D + L+++ Y+ L ++L L E ARF A +V A++ +H+
Sbjct: 61 QWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120
Query: 887 RGVLYRGVSPDVLMLDKSGHLQ 908
++R + PD +++D +GH++
Sbjct: 121 LHYVHRDIKPDNILMDMNGHIR 142
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.002
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E ARF AA V +A+ LH ++YR + P+ ++LD GH+
Sbjct: 95 EPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHV 135
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E ARF A + A+E +HK G ++R + PD +++D GH++
Sbjct: 100 EVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIK 141
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.003
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E RF A +V+AL+ LH ++YR + + LMLDK GH++
Sbjct: 92 FSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIK 135
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E+ +F A + AL+ LH G++YR + P+ ++LD+ GH++
Sbjct: 97 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIK 138
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.004
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
D A F AA +V L+ LH +G++YR + D +MLD+ GH++
Sbjct: 93 FDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIK 136
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.004
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
L E++ +F A V A++ +H+ G ++R + PD L+LD GH++
Sbjct: 98 LSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVK 141
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.004
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
E A F AA + L LH+RG++YR + D +MLD GH++
Sbjct: 100 EPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIK 141
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 908 | |||
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| PLN03145 | 365 | Protein phosphatase 2c; Provisional | 100.0 | |
| KOG0697 | 379 | consensus Protein phosphatase 1B (formerly 2C) [Si | 100.0 | |
| KOG0698 | 330 | consensus Serine/threonine protein phosphatase [Si | 100.0 | |
| PTZ00224 | 381 | protein phosphatase 2C; Provisional | 100.0 | |
| COG0631 | 262 | PTC1 Serine/threonine protein phosphatase [Signal | 100.0 | |
| PF00481 | 254 | PP2C: Protein phosphatase 2C; InterPro: IPR001932 | 100.0 | |
| KOG1113 | 368 | consensus cAMP-dependent protein kinase types I an | 100.0 | |
| KOG0700 | 390 | consensus Protein phosphatase 2C/pyruvate dehydrog | 100.0 | |
| PRK14559 | 645 | putative protein serine/threonine phosphatase; Pro | 100.0 | |
| KOG0699 | 542 | consensus Serine/threonine protein phosphatase [Si | 100.0 | |
| smart00332 | 255 | PP2Cc Serine/threonine phosphatases, family 2C, ca | 100.0 | |
| cd00143 | 254 | PP2Cc Serine/threonine phosphatases, family 2C, ca | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.96 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.96 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.96 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.96 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.94 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.94 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.93 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG1323 | 493 | consensus Serine/threonine phosphatase [Signal tra | 99.93 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.92 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.92 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.91 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.91 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.91 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.9 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.9 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.9 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.89 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.89 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.89 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.88 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.88 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.88 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.88 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.88 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.87 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.87 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.87 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.87 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.87 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.87 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.87 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.87 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.86 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.86 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.86 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.86 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.86 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.86 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.85 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.85 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.85 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.85 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.85 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.85 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.85 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.84 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.84 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.84 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.84 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.84 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.84 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.84 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.83 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.83 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.83 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.83 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.83 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.83 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.83 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.83 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.83 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.83 | |
| KOG1379 | 330 | consensus Serine/threonine protein phosphatase [Si | 99.83 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.83 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.82 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.82 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.82 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.82 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.82 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.82 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.82 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.82 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.82 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.82 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.81 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.81 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.81 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.81 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.81 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.81 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.81 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.8 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.8 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.8 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.8 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.8 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.8 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.8 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.8 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.8 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.8 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.8 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.79 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.79 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.79 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.79 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.79 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.79 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.79 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.79 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.79 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.79 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.79 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.79 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.79 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.79 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.78 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.78 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.78 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.78 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.78 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.78 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.78 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.78 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.78 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.77 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.77 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.77 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.77 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.77 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.77 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.77 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.77 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.77 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.77 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.77 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.77 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.77 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.77 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.77 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.76 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.76 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.76 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.76 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.76 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.76 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.76 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.76 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.76 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.76 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.76 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.76 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.76 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.76 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.76 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.76 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.76 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.76 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.76 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.76 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.76 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.75 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.75 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.75 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.75 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.75 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.75 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.75 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.75 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.75 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.75 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.75 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.75 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.75 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.75 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.75 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.75 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.75 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.75 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.75 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.75 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.75 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.75 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.75 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.75 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.74 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.74 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.74 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.74 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.74 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.74 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.74 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.74 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.74 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.74 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.74 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.74 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.74 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.74 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.74 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.74 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.74 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.74 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.74 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.74 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.74 | |
| PF13672 | 212 | PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A | 99.74 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.74 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.74 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.74 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.74 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.74 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.74 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.74 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.74 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.74 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.74 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.74 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.73 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.73 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.73 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.73 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.73 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.73 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.73 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.73 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.73 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.73 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.73 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.73 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.73 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.73 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.73 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.73 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.73 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.73 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.73 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.73 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.73 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.73 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.73 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.73 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.73 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.73 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.73 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.73 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.73 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.73 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.72 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.72 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.72 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.72 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.72 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.72 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.72 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.72 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.72 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.72 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.72 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.72 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.72 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.72 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.72 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.72 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.72 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.72 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.72 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.72 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.72 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.72 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.72 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.72 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.72 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.72 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.72 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.72 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.72 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.71 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.71 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.71 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.71 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.71 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.71 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.71 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.71 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.71 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.71 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.71 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.71 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.71 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.71 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.71 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.71 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.71 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.71 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.71 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.71 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.71 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.71 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.71 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.71 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.71 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.71 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.71 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.71 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.71 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.7 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.7 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.7 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.7 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.7 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.7 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.7 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.7 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.7 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.7 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.7 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.7 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.7 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.7 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.7 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.7 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.7 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.7 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.7 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.7 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.7 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.7 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.7 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.69 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.69 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.69 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.69 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.69 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.69 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.69 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.69 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.69 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.69 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.69 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.69 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.68 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.68 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.68 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.68 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.68 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.68 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.68 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.68 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.68 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.68 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.68 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.67 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.67 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.67 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.67 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.67 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.67 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.67 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.66 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.66 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.66 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.66 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.66 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.66 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.66 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.66 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.66 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.66 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.66 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.65 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.65 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.65 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.65 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.65 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.65 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.65 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.64 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.64 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.63 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.63 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.63 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.63 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.63 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.62 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.62 | |
| smart00331 | 193 | PP2C_SIG Sigma factor PP2C-like phosphatases. | 99.61 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.61 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.61 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.6 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.6 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.59 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.59 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.58 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.58 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.58 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.58 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.57 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.56 | |
| KOG2968 | 1158 | consensus Predicted esterase of the alpha-beta hyd | 99.56 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.56 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.55 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.55 | |
| KOG1113 | 368 | consensus cAMP-dependent protein kinase types I an | 99.54 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.54 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.53 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.53 | |
| PRK09392 | 236 | ftrB transcriptional activator FtrB; Provisional | 99.52 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.48 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.48 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.48 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.47 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.46 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.46 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.45 | |
| TIGR02865 | 764 | spore_II_E stage II sporulation protein E. Stage I | 99.45 | |
| cd00038 | 115 | CAP_ED effector domain of the CAP family of transc | 99.44 | |
| PRK11753 | 211 | DNA-binding transcriptional dual regulator Crp; Pr | 99.42 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.42 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.41 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.4 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.39 | |
| PF00027 | 91 | cNMP_binding: Cyclic nucleotide-binding domain; In | 99.39 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.37 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.35 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.35 | |
| PRK11161 | 235 | fumarate/nitrate reduction transcriptional regulat | 99.33 | |
| PRK10402 | 226 | DNA-binding transcriptional activator YeiL; Provis | 99.33 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.33 | |
| smart00100 | 120 | cNMP Cyclic nucleotide-monophosphate binding domai | 99.32 | |
| COG0664 | 214 | Crp cAMP-binding proteins - catabolite gene activa | 99.31 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.31 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.31 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.29 | |
| PLN02868 | 413 | acyl-CoA thioesterase family protein | 99.28 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.27 | |
| PRK09392 | 236 | ftrB transcriptional activator FtrB; Provisional | 99.27 | |
| PF07228 | 193 | SpoIIE: Stage II sporulation protein E (SpoIIE); I | 99.27 | |
| KOG0498 | 727 | consensus K+-channel ERG and related proteins, con | 99.24 | |
| PF00027 | 91 | cNMP_binding: Cyclic nucleotide-binding domain; In | 99.22 | |
| cd00038 | 115 | CAP_ED effector domain of the CAP family of transc | 99.18 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.16 | |
| COG2905 | 610 | Predicted signal-transduction protein containing c | 99.14 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.13 | |
| PRK11753 | 211 | DNA-binding transcriptional dual regulator Crp; Pr | 99.12 | |
| PRK09391 | 230 | fixK transcriptional regulator FixK; Provisional | 99.11 | |
| KOG0500 | 536 | consensus Cyclic nucleotide-gated cation channel C | 99.08 | |
| TIGR03697 | 193 | NtcA_cyano global nitrogen regulator NtcA, cyanoba | 99.07 | |
| smart00100 | 120 | cNMP Cyclic nucleotide-monophosphate binding domai | 99.06 | |
| COG0664 | 214 | Crp cAMP-binding proteins - catabolite gene activa | 99.06 | |
| KOG0498 | 727 | consensus K+-channel ERG and related proteins, con | 99.03 | |
| PRK13918 | 202 | CRP/FNR family transcriptional regulator; Provisio | 99.02 | |
| PLN02868 | 413 | acyl-CoA thioesterase family protein | 99.02 | |
| PRK10402 | 226 | DNA-binding transcriptional activator YeiL; Provis | 99.0 | |
| KOG3542 | 1283 | consensus cAMP-regulated guanine nucleotide exchan | 98.98 | |
| KOG0500 | 536 | consensus Cyclic nucleotide-gated cation channel C | 98.96 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 98.96 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.95 | |
| KOG2968 | 1158 | consensus Predicted esterase of the alpha-beta hyd | 98.95 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.92 | |
| PRK11161 | 235 | fumarate/nitrate reduction transcriptional regulat | 98.91 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 98.89 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 98.89 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 98.87 | |
| KOG0499 | 815 | consensus Cyclic nucleotide-gated cation channel C | 98.87 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 98.85 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 98.82 | |
| COG2905 | 610 | Predicted signal-transduction protein containing c | 98.79 | |
| PRK13918 | 202 | CRP/FNR family transcriptional regulator; Provisio | 98.79 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.78 | |
| KOG0499 | 815 | consensus Cyclic nucleotide-gated cation channel C | 98.77 | |
| TIGR03697 | 193 | NtcA_cyano global nitrogen regulator NtcA, cyanoba | 98.73 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 98.65 | |
| PRK09391 | 230 | fixK transcriptional regulator FixK; Provisional | 98.65 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.54 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.52 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.49 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.37 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.32 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.31 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 98.21 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.17 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.17 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.0 |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-67 Score=555.98 Aligned_cols=420 Identities=29% Similarity=0.455 Sum_probs=382.8
Q ss_pred ccCcccccCCHHHHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEecccc
Q 002560 455 VPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEK 534 (908)
Q Consensus 455 ~~~~~~~~k~~e~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g 534 (908)
..+.+.+.|+....+.|.+++..+.|+++|+..++++++.+|...+|++|+.||+|||+++.+|++.+|++.|.....
T Consensus 136 ~~~l~~~~Kd~~~k~lI~dAi~~NdFLknLd~~Qi~e~v~~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~~~g~-- 213 (732)
T KOG0614|consen 136 SITLPRYNKDVGAKQLIRDAIQKNDFLKNLDASQIKELVDCMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVSREGK-- 213 (732)
T ss_pred ccccccccCCccHHHHHHHHHHhhHHHHhhhHHHHHHHHHhhCcccccCCcEEEecCCCCceEEEeecceEEEeeCCe--
Confidence 356777889999999999999999999999999999999999999999999999999999999999999999986532
Q ss_pred CcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhh--HHHHHHhhhchhhccCCH
Q 002560 535 NGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN--LSSLKLLRSVDLLSRLTI 612 (908)
Q Consensus 535 ~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~--~~~~~~l~~~~~l~~l~~ 612 (908)
+ +.++++|..|||++++++++|+|+|+|+++|.+|.|+|+.|+.+|+..... .++++||+++++|++++.
T Consensus 214 ------l--l~~m~~gtvFGELAILynctRtAsV~alt~~~lWaidR~vFq~IM~~tg~~r~~~~~~fLrsv~~~q~l~E 285 (732)
T KOG0614|consen 214 ------L--LGKMGAGTVFGELAILYNCTRTASVRALTDVRLWAIDREVFQAIMMRTGLERHEQYMNFLRSVPLFQNLPE 285 (732)
T ss_pred ------e--eeccCCchhhhHHHHHhCCcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCH
Confidence 2 345588999999999999999999999999999999999999999987654 468899999999999999
Q ss_pred HHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCC
Q 002560 613 LQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEG 692 (908)
Q Consensus 613 ~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G 692 (908)
+.+.++++.|+...|..|+.|++||+.+++||||.+|.|+|++... .......+..+++|
T Consensus 286 e~L~KiaD~le~~~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e--------------------~~~q~~~lr~l~kG 345 (732)
T KOG0614|consen 286 ELLLKIADVLEEEYYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDE--------------------GSTQPQELRTLNKG 345 (732)
T ss_pred HHHHHHHHHHHHHhhcCCceEEeecCCCCeEEEEecceEEEeecCC--------------------CCCchhHHhhcccc
Confidence 9999999999999999999999999999999999999999998776 22456789999999
Q ss_pred CeechhhhcccCcccceEeecCc-eEEEEecccccccccCccccccccccCCcccCCCCCCCCCccccccccccccccce
Q 002560 693 SYFGEWTLLGEHMGSLTAVAVDD-VVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDM 771 (908)
Q Consensus 693 ~~FGe~all~~~~r~~tv~a~~~-~~~~~i~~~~f~~llg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (908)
|||||.||++...|+|+|+|..+ ++|+.|+|+.|.+++|.+.++..++.....+. .+......-...+..+.++++
T Consensus 346 d~FGE~al~~edvRtAniia~~~gv~cl~lDresF~~liG~l~~l~ek~~~D~~r~---A~~~~~~~~~~e~a~v~l~dl 422 (732)
T KOG0614|consen 346 DYFGERALLGEDVRTANIIAQAPGVECLTLDRESFKKLIGDLEELKEKDYGDEERR---ASVVIKEDFAEEFAQVKLSDL 422 (732)
T ss_pred chhhHHHhhccCccchhhhccCCCceEEEecHHHHHHhcccHHHhhhhhccchhhh---hhhHHHHHHHhhhcccchhhh
Confidence 99999999999999999999985 99999999999999999999987665443321 000001122447888999999
Q ss_pred EEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 772 EWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+++..||-|+||.|-+|........+|+|+++|..+.+..+.+++..|.+||..++ +|+|+++|.+|.++.++||+||.
T Consensus 423 ~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 423 KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhhHHh
Confidence 99999999999999999987776689999999999999999999999999999985 99999999999999999999999
Q ss_pred CCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.||.|+..|+ +.|++.++++|++++++|++|||++|||+|||||+|+|+|.+|++|
T Consensus 502 ClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~K 560 (732)
T KOG0614|consen 502 CLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLK 560 (732)
T ss_pred hcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceE
Confidence 99999999998 8999999999999999999999999999999999999999999987
|
|
| >PLN03145 Protein phosphatase 2c; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=394.98 Aligned_cols=250 Identities=29% Similarity=0.490 Sum_probs=210.1
Q ss_pred eeEEEEEEecccCCCCCCCCCCcceEEEecCCC--------CCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCc
Q 002560 93 YELRYSFLSQRGYYPDALDKANQDSFCIHTPFG--------TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKF 164 (908)
Q Consensus 93 ~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~--------~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~ 164 (908)
+.++++.+|++| .|+.|||++++..++. ...+..||||||||| |+.|++++++.|++.+.+....
T Consensus 63 ~~~~~~~~s~~G-----~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~~~ 135 (365)
T PLN03145 63 PVVRSGAWADIG-----SRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG--GKHAADFACYHLPRFIVEDEDF 135 (365)
T ss_pred CceEEEEEcccc-----CCCCCCCceEecccccccccccccCCCCceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhcc
Confidence 357899999999 6999999998765431 123468999999999 8899999999999988776555
Q ss_pred chhHHHHHHHHHHHHHHHHHhccC--CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChh
Q 002560 165 HEDAVDACHSSYLTTNSQLHADVL--DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFRED 242 (908)
Q Consensus 165 ~~~~~~~l~~~~~~~~~~i~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~ 242 (908)
..++.++|.++|..+|..+.+... ....||||++++++.++++|||||||||||+++++. +.+||.||+|.++.
T Consensus 136 ~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~----~~~LT~DH~~~~~~ 211 (365)
T PLN03145 136 PREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGK----AIEMSRDHKPMCSK 211 (365)
T ss_pred chhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCe----EEEecCCCCCCCHH
Confidence 567788999999999999876422 123489999999999999999999999999999764 78899999999999
Q ss_pred HHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccC------CccccceE
Q 002560 243 ELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETI------GVVANPEI 316 (908)
Q Consensus 243 E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~------~v~~~Pdi 316 (908)
|++||++.||.|... + + +| .+++||+|||..+|.. +++++||+
T Consensus 212 E~~RI~~~Gg~v~~g-------------------------~--v-~g---~l~vTRalGD~~~k~~k~~~~~~vs~ePdv 260 (365)
T PLN03145 212 ERKRIEASGGYVYDG-------------------------Y--L-NG---QLNVARALGDWHMEGMKGSDGGPLSAEPEL 260 (365)
T ss_pred HHHHHHHcCCceecc-------------------------e--E-CC---ccccccccccccccccccccCCCcceEEEE
Confidence 999999999887410 0 0 11 2679999999876542 47899999
Q ss_pred EEEEeCCCCCEEEEEcCccccccChHHHHHHHh----ccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCC
Q 002560 317 VVWELTNDHPFFVLASDGVFEFLSSQAVVDMVA----KYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGL 389 (908)
Q Consensus 317 ~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v~----~~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~ 389 (908)
..++++++|.|||||||||||+|+++++++++. ...+|+++|+.|+++|+.+ ++.||||||||+|+..
T Consensus 261 ~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r-----gs~DNITvIVV~l~~~ 332 (365)
T PLN03145 261 MTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR-----KSGDNLAVVVVCFQSQ 332 (365)
T ss_pred EEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-----CCCCCEEEEEEEeecC
Confidence 999999999999999999999999999877654 3468999999999999987 8999999999999964
|
|
| >KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-44 Score=349.16 Aligned_cols=256 Identities=27% Similarity=0.478 Sum_probs=219.0
Q ss_pred CCCeeEEEEEEecccCCCCCCCCCCcceEEEecCCC-CCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcc---
Q 002560 90 SAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFG-TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFH--- 165 (908)
Q Consensus 90 ~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~-~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~--- 165 (908)
...-.++||..|++|| |-.+||++.....+. .-.+|.||+|||||. |...|.+++++|.+.+..+..+.
T Consensus 17 G~GNglryg~SSMQGW-----R~eMEDah~A~~~l~~~l~dWSfFAVfDGHA--Gs~va~~c~~hLlehi~sse~F~~~~ 89 (379)
T KOG0697|consen 17 GEGNGLRYGVSSMQGW-----RVEMEDAHTAVAGLPSPLEDWSFFAVFDGHA--GSQVANHCAEHLLEHIISSEEFRGMT 89 (379)
T ss_pred CcCCceeeeeccccch-----hhhhhhhhhhhhcCCCCccCceEEEEEcCcc--chHHHHHHHHHHHHHhhhhHHHhhhc
Confidence 3344689999999997 778899987654433 357999999999999 88999999999999887654433
Q ss_pred -----hhHHHHHHHHHHHHHHHHHhc---cCCCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCC
Q 002560 166 -----EDAVDACHSSYLTTNSQLHAD---VLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQT 237 (908)
Q Consensus 166 -----~~~~~~l~~~~~~~~~~i~~~---~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~ 237 (908)
++...-|+..|.++|..+... ......+||||+++++.+.++|++|+||||++++|++. +.--|+||+
T Consensus 90 k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~----~~f~TqDHK 165 (379)
T KOG0697|consen 90 KNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGE----VVFSTQDHK 165 (379)
T ss_pred cCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCc----eEEeccCCC
Confidence 367788999999999887654 22234589999999999999999999999999999886 667899999
Q ss_pred CCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccC--------C
Q 002560 238 PFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETI--------G 309 (908)
Q Consensus 238 ~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~--------~ 309 (908)
|.+|.|++||+.+||.|+.. +.||. +++||||||..+|.. -
T Consensus 166 P~~p~EkeRIqnAGGSVMIq----------------------------RvNGs---LAVSRAlGDydyK~v~~kgp~eQl 214 (379)
T KOG0697|consen 166 PYLPKEKERIQNAGGSVMIQ----------------------------RVNGS---LAVSRALGDYDYKNVPGKGPTEQL 214 (379)
T ss_pred CCChHHHHHHhcCCCeEEEE----------------------------Eecce---eeeehhccCcccccCCCCCchhcc
Confidence 99999999999999999742 22333 899999999988753 3
Q ss_pred ccccceEEEEEeCCCCCEEEEEcCccccccChHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Q 002560 310 VVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKY----KDPRDACAAIVAESYRLWLQYETRTDDITVIVVH 385 (908)
Q Consensus 310 v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v~~~----~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~ 385 (908)
|+++|+|........|.||||||||+||+|+|+|+.+++++. .|+..+|...++..+-+ |+.||+|+|+|.
T Consensus 215 VSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhK-----GSRDNMsivlvc 289 (379)
T KOG0697|consen 215 VSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHK-----GSRDNMSIVLVC 289 (379)
T ss_pred cCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhc-----cCccCceEEEEe
Confidence 899999999999999999999999999999999999999774 68899999999999986 999999999999
Q ss_pred cCCCCCc
Q 002560 386 INGLKNT 392 (908)
Q Consensus 386 ~~~~~~~ 392 (908)
|.+.|.+
T Consensus 290 fp~APkv 296 (379)
T KOG0697|consen 290 FPGAPKV 296 (379)
T ss_pred cCCCCCC
Confidence 9988753
|
|
| >KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=374.62 Aligned_cols=253 Identities=40% Similarity=0.607 Sum_probs=215.2
Q ss_pred EEEEecccCCCCCCCCCCcceEEEecCCC-----CCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcch---hH
Q 002560 97 YSFLSQRGYYPDALDKANQDSFCIHTPFG-----TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHE---DA 168 (908)
Q Consensus 97 ~~~~s~~G~~~~~~r~~neD~~~~~~~~~-----~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~---~~ 168 (908)
.+.++.+| .|..+||.+.....+. ......||||||||| |..||+|+.++|+..+........ .+
T Consensus 42 ~~~~~~~~-----~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHG--G~~~A~~~~~~L~~~l~~~~~~~~~~~~~ 114 (330)
T KOG0698|consen 42 GSLLSIRG-----RRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHG--GDLAAKFAAKHLHKNLLEQLAFPKDRQDV 114 (330)
T ss_pred eEEEecCC-----CCCccCcceeecccccccccCCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhhcccchHHH
Confidence 45568888 4667788877665532 223689999999999 999999999999999988766544 47
Q ss_pred HHHHHHHHH-HHHHHHHhccCCCCCCcceEEEEEEEC-CEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHH
Q 002560 169 VDACHSSYL-TTNSQLHADVLDDSMSGTTAVTVLVRG-RTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELER 246 (908)
Q Consensus 169 ~~~l~~~~~-~~~~~i~~~~~~~~~~GtT~~~~~i~~-~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~R 246 (908)
..+++++|. .+|..+.....+...+|||++++++.. ++|||||+|||||+|+++++ .+.+||.||+|.+++|++|
T Consensus 115 ~~a~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~---~a~~Ls~DHkP~~~~E~~R 191 (330)
T KOG0698|consen 115 KDALRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGG---VAVQLSVDHKPDREDERER 191 (330)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCC---eeeeCCCCCCCCcHHHHHH
Confidence 899999999 699999876333456799999988884 59999999999999998754 5899999999999999999
Q ss_pred HHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCC
Q 002560 247 VKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHP 326 (908)
Q Consensus 247 i~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~ 326 (908)
|+++||+|..... ++| .+| ++++||+|||..+|.++|+++||+....+++.|.
T Consensus 192 I~~~GG~v~~~~~---------------------~~R---v~G---~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~de 244 (330)
T KOG0698|consen 192 IEAAGGRVSNWGG---------------------VWR---VNG---VLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDE 244 (330)
T ss_pred HHHcCCEEEEcCC---------------------cce---Eec---eEEEeeecCCHHhcCCcEecCCceEEEEcCCCCc
Confidence 9999999974221 223 333 3999999999999988899999999999999999
Q ss_pred EEEEEcCccccccChHHHHHHHhc----cCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCCC
Q 002560 327 FFVLASDGVFEFLSSQAVVDMVAK----YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKN 391 (908)
Q Consensus 327 flvlaSDGl~d~l~~~ei~~~v~~----~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~~~ 391 (908)
|||||||||||+++++|++++|+. ..++..++..|...|..+ ++.||||||||+|.+...
T Consensus 245 FLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~-----~s~DnitvvvV~l~~~~~ 308 (330)
T KOG0698|consen 245 FLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSR-----GSKDNITVVVVRLKSSPK 308 (330)
T ss_pred EEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhc-----CCCCCeEEEEEEecCccc
Confidence 999999999999999999999988 568888999999999886 899999999999998754
|
|
| >PTZ00224 protein phosphatase 2C; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=359.99 Aligned_cols=244 Identities=25% Similarity=0.375 Sum_probs=202.3
Q ss_pred CCeeEEEEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcchhHHH
Q 002560 91 AKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVD 170 (908)
Q Consensus 91 ~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~ 170 (908)
.+..+.+++.|++| .|+.|||++++.. .+++.||||||||| |..||+++++.|...+...... ...+
T Consensus 18 ~~~~~~~g~~s~~G-----~R~~nED~~~v~~----~~~~~lfgVfDGHg--G~~~S~~~~~~l~~~l~~~~~~--~~~~ 84 (381)
T PTZ00224 18 GNSIFRCASACVNG-----YRESMEDAHLLYL----TDDWGFFGVFDGHV--NDECSQYLARAWPQALEKEPEP--MTDE 84 (381)
T ss_pred CCccEEEEEEeCCC-----CCCCCCCeeEecc----CCCceEEEEEeCCC--cHHHHHHHHHHHHHHHHhcccc--ccHH
Confidence 56788999999999 5899999987643 23557999999999 8889999999999887543321 1235
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCcceEEEEEEE-CCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHH
Q 002560 171 ACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR-GRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKL 249 (908)
Q Consensus 171 ~l~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~-~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~ 249 (908)
.|+++|..+|..+.+... .+|||++++++. +++++||||||||+|++|++. +.+||.||++.++.|+.||.+
T Consensus 85 ~l~~a~~~~d~~i~~~~~---~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~----~~~LT~DH~~~~~~E~~RI~~ 157 (381)
T PTZ00224 85 RMEELCLEIDEEWMDSGR---EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGK----LVFATEDHKPNNPGERQRIEA 157 (381)
T ss_pred HHHHHHHHHHHHHHhccc---CCCCeEEEEEEEECCEEEEEEcccceEEEEECCE----EEEcccCCCCCCHHHHhHHHH
Confidence 689999999999986543 359999998886 689999999999999999764 789999999999999999999
Q ss_pred cCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccC--------CccccceEEEEEe
Q 002560 250 SGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETI--------GVVANPEIVVWEL 321 (908)
Q Consensus 250 ~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~--------~v~~~Pdi~~~~l 321 (908)
.||.+.. .| ..+++++||+|||..+|.. +++++||+..+++
T Consensus 158 ~gg~v~~-------------------------~R------v~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l 206 (381)
T PTZ00224 158 CGGRVVS-------------------------NR------VDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTC 206 (381)
T ss_pred ccCEecc-------------------------cc------ccCceeeecccCCcccccccccccccCcceeeeEEEEEEC
Confidence 9987731 11 1122899999999765433 3679999999999
Q ss_pred CCCCCEEEEEcCcccc-ccChHHHHHHHhc----cCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCCC
Q 002560 322 TNDHPFFVLASDGVFE-FLSSQAVVDMVAK----YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKN 391 (908)
Q Consensus 322 ~~~d~flvlaSDGl~d-~l~~~ei~~~v~~----~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~~~ 391 (908)
.++| ||||||||||| +++++|+++++.. ..+++.+|+.|+++|+.+ |+.||||||||++...+.
T Consensus 207 ~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~r-----Gs~DNITvIvV~~~~~~~ 275 (381)
T PTZ00224 207 QSND-FIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRR-----GSKDNISCLIVQLKDGAS 275 (381)
T ss_pred CCCC-EEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc-----CCCCCEEEEEEEeeCCCC
Confidence 9877 68999999999 8999999999863 468999999999999987 899999999999987654
|
|
| >COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=352.83 Aligned_cols=245 Identities=29% Similarity=0.398 Sum_probs=206.7
Q ss_pred CCeeEEEEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcC--hHHHHHHHHHHHHHHHHhcCCcchh-
Q 002560 91 AKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEF--GAQCSQFVKRKLCENLLRNNKFHED- 167 (908)
Q Consensus 91 ~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~--G~~as~~~~~~l~~~l~~~~~~~~~- 167 (908)
+...+.++..|+.|. .|.+|||++++..+..... ..||+|||||||| |+.||+.+++.|.+.+.+.......
T Consensus 4 ~~~~~~~~~~s~~g~----~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~ 78 (262)
T COG0631 4 GILSLKVAGLSDVGT----VRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNE 78 (262)
T ss_pred ccceeeeeeeccCCC----ccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccch
Confidence 345678899999995 7889999999877444344 7899999999977 7777777777777777664433322
Q ss_pred -HHHHHHHHHHHHHHHHHhccC---CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhH
Q 002560 168 -AVDACHSSYLTTNSQLHADVL---DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDE 243 (908)
Q Consensus 168 -~~~~l~~~~~~~~~~i~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E 243 (908)
..+.+.+++..+|..|..... +...||||++++++.++++|+|||||||+|++|++. .++||.||++.+..+
T Consensus 79 ~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~----~~~lT~DH~~~~~~~ 154 (262)
T COG0631 79 SLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGE----LKQLTEDHSLVNRLE 154 (262)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCc----eEEeccCCcHHHHHH
Confidence 678999999999999988743 446799999999999999999999999999999885 889999999998888
Q ss_pred HHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCC
Q 002560 244 LERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTN 323 (908)
Q Consensus 244 ~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~ 323 (908)
+.|+.. ++++..||.+ +++|||||+... .+|++...++++
T Consensus 155 ~~~~~~------------------------~~~~~~~~~~----------~~ltralG~~~~------~~p~~~~~~~~~ 194 (262)
T COG0631 155 QRGIIT------------------------PEEARSHPRR----------NALTRALGDFDL------LEPDITELELEP 194 (262)
T ss_pred HhcCCC------------------------HHHHHhCccc----------hhhhhhcCCCcc------cceeEEEEEcCC
Confidence 866552 3334455666 799999999843 799999999999
Q ss_pred CCCEEEEEcCccccccChHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCC
Q 002560 324 DHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLK 390 (908)
Q Consensus 324 ~d~flvlaSDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~~ 390 (908)
+ .|+|||||||||+++++++.+++....+++++++.|++.|+.+ ++.||||+|+|++....
T Consensus 195 ~-d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~-----g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 195 G-DFLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELALEG-----GGPDNITVVLVRLNGEG 255 (262)
T ss_pred C-CEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhc-----CCCCceEEEEEEeeccc
Confidence 9 6689999999999999999999998789999999999999996 89999999999998764
|
|
| >PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=355.83 Aligned_cols=238 Identities=37% Similarity=0.588 Sum_probs=194.0
Q ss_pred EEEEecccCCCCCCCCCCcceEEEecCCC---CCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcc--hhHHHH
Q 002560 97 YSFLSQRGYYPDALDKANQDSFCIHTPFG---TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFH--EDAVDA 171 (908)
Q Consensus 97 ~~~~s~~G~~~~~~r~~neD~~~~~~~~~---~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~--~~~~~~ 171 (908)
+++.+..| .|+.|||++++..++. ...+..+|+|||||| |..||+++.+.|+..+....... .++.++
T Consensus 2 ~~~~~~~g-----~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhg--G~~~a~~~~~~l~~~l~~~~~~~~~~~~~~a 74 (254)
T PF00481_consen 2 YGVSSMQG-----VRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHG--GSEAAEYASQNLPEFLKENLSFNDGNDIEEA 74 (254)
T ss_dssp EEEEEEEC-----TSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCeecCCC-----CCCcccCEEEEecCccccCCCCCcEEEEEecCCC--ChhhHHHHHHHHHHHHHhhcccccccchhhc
Confidence 67788888 6999999999887653 456789999999999 88999999999998776654322 267899
Q ss_pred HHHHHHH-HHHHHHhccC--CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHH
Q 002560 172 CHSSYLT-TNSQLHADVL--DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVK 248 (908)
Q Consensus 172 l~~~~~~-~~~~i~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~ 248 (908)
|..+|.. ++..+..... ....+||||+++++.++++|+|||||||||+++.+.. .++||.||+|.++.|+.||+
T Consensus 75 l~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~---~~~Lt~dH~~~~~~E~~RI~ 151 (254)
T PF00481_consen 75 LRQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGI---IKQLTRDHKPSNPDERERIR 151 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEE---EEESS---STTSHHHHHHHH
T ss_pred ccceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeecccc---ccccccccccchhhccceee
Confidence 9999999 8888876311 4567899999999999999999999999999998762 25999999999999999999
Q ss_pred HcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCcccccc---CCccccceEEEEEeCCCC
Q 002560 249 LSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAET---IGVVANPEIVVWELTNDH 325 (908)
Q Consensus 249 ~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~---~~v~~~Pdi~~~~l~~~d 325 (908)
++||.+... +..+|. +++||+|||..+|. ++|+++|++..++++++|
T Consensus 152 ~~gg~v~~~---------------------------~rv~g~---l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d 201 (254)
T PF00481_consen 152 KAGGRVSEN---------------------------GRVNGV---LAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDD 201 (254)
T ss_dssp HTT-GEEET---------------------------EEETTT---BSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTE
T ss_pred ccccccccc---------------------------hhhhhc---cccccccccccccccccceeeeecccccccccccc
Confidence 999988631 111222 79999999999998 789999999999999999
Q ss_pred CEEEEEcCccccccChHHHHHHHhccCC----HHHHHHHHHHHHHHHHHhcCCCCCCe
Q 002560 326 PFFVLASDGVFEFLSSQAVVDMVAKYKD----PRDACAAIVAESYRLWLQYETRTDDI 379 (908)
Q Consensus 326 ~flvlaSDGl~d~l~~~ei~~~v~~~~~----~~~~a~~Lv~~a~~~~~~~~g~~DNi 379 (908)
.|||||||||||+|+++|+++++.+..+ |+.+|+.|++.|+.+ |+.|||
T Consensus 202 ~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~-----gs~DNi 254 (254)
T PF00481_consen 202 EFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIAR-----GSKDNI 254 (254)
T ss_dssp EEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHT-----THHSHE
T ss_pred eEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc-----CCCCCC
Confidence 9999999999999999999999987644 899999999999987 899997
|
pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A .... |
| >KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=326.51 Aligned_cols=253 Identities=34% Similarity=0.516 Sum_probs=233.7
Q ss_pred cCcccccCCHHHHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccC
Q 002560 456 PSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKN 535 (908)
Q Consensus 456 ~~~~~~~k~~e~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~ 535 (908)
-++...||+.+++..+.++++++.+|++|+++++..++++|..+.+++|+.|+.||+.++.||||.+|++.||+++.
T Consensus 105 ~~~~~~pKd~e~~~~L~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~dVyv~~~--- 181 (368)
T KOG1113|consen 105 FKRKYIPKDDETRRRLEEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEGDNFYVIDKGTFDVYVNGT--- 181 (368)
T ss_pred hhhcCCCCCHHHHHHHHHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcCCcEEEEecceEEEEECCe---
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999998742
Q ss_pred cccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhH--HHHHHhhhchhhccCCHH
Q 002560 536 GEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNL--SSLKLLRSVDLLSRLTIL 613 (908)
Q Consensus 536 ~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~--~~~~~l~~~~~l~~l~~~ 613 (908)
.+ .+++||.+|||++|+++.||.|||.|.+++.+|.|++..|.++++.+.... .+..+|+++|+|.++...
T Consensus 182 -----~v--~~~~~g~sFGElALmyn~PRaATv~a~t~~klWgldr~SFrrIi~~s~~kkrkMy~~~l~s~pil~~l~k~ 254 (368)
T KOG1113|consen 182 -----YV--TTYSPGGSFGELALMYNPPRAATVVAKSLKKLWGLDRTSFRRIIMKSCIKKRKMYEPFLESVPILESLEKL 254 (368)
T ss_pred -----EE--eeeCCCCchhhhHhhhCCCcccceeeccccceEEEeeceeEEEeeccchhhhhhhhhhhhcchhhHHHHHH
Confidence 23 344889999999999999999999999999999999999999999876654 455899999999999999
Q ss_pred HHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCC
Q 002560 614 QLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGS 693 (908)
Q Consensus 614 ~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~ 693 (908)
++.++++.+..+.|++|+.|+.||++++.||+|.+|+|.+.+..+ .+.+ .++.||
T Consensus 255 er~kv~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~~------------------------~v~v-kl~~~d 309 (368)
T KOG1113|consen 255 ERAKVADALGTKSYKDGERVIVQGDQGEHFYIIEEGEVDVLKKRD------------------------GVEV-KLKKGD 309 (368)
T ss_pred HHHhhhcccceeeccCCceEEeccCCcceEEEecccccchhhccC------------------------CeEE-Eechhh
Confidence 999999999999999999999999999999999999999876554 2566 999999
Q ss_pred eechhhhcccCcccceEeecCceEEEEecccccccccCccccccccccCC
Q 002560 694 YFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNS 743 (908)
Q Consensus 694 ~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~~~~~~ 743 (908)
||||.||+++.||.+||.|.++..|..++|..|++++||+.+++.++...
T Consensus 310 yfge~al~~~~pr~Atv~a~~~~kc~~~dk~~ferllgpc~dilkr~~~~ 359 (368)
T KOG1113|consen 310 YFGELALLKNLPRAATVVAKGRLKCAKLDKPRFERLLGPCQDILKRNRST 359 (368)
T ss_pred hcchHHHHhhchhhceeeccCCceeeeeChHHHHHHhhHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999866533
|
|
| >KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=324.08 Aligned_cols=230 Identities=28% Similarity=0.471 Sum_probs=186.5
Q ss_pred CCCcceEEEecCCCCCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhc------------C-C---------------
Q 002560 112 KANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN------------N-K--------------- 163 (908)
Q Consensus 112 ~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~------------~-~--------------- 163 (908)
+.-||++.+... ...+|.|+||||||| |..||+|+.++|..++... . .
T Consensus 83 ~~~edrv~~~~s--~~~~~~fvGIyDGhg--Gp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~ 158 (390)
T KOG0700|consen 83 KAEEDRVSVAVS--EENGWLFVGIYDGHG--GPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQ 158 (390)
T ss_pred CcccCcceeeee--ccCCeEEEEEecCCC--CccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhc
Confidence 445787765442 357899999999999 9999999999999987621 1 1
Q ss_pred ------cchhHHHHHHHHHHHHHHHHHhc-------cCCCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcC-Ce-eE
Q 002560 164 ------FHEDAVDACHSSYLTTNSQLHAD-------VLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRG-KE-IV 228 (908)
Q Consensus 164 ------~~~~~~~~l~~~~~~~~~~i~~~-------~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~-~~-~~ 228 (908)
....+.++|.+||.+++..+... ...-+.|||||+++++.+..|||||+|||||+|++... .. +.
T Consensus 159 ~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~ 238 (390)
T KOG0700|consen 159 LSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLV 238 (390)
T ss_pred ccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEE
Confidence 14567899999999999998644 22335699999999999999999999999999987663 33 79
Q ss_pred EEeCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCc-cccccccCccccc-
Q 002560 229 AVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPG-TAFTRSIGDSIAE- 306 (908)
Q Consensus 229 ~~~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g-~~~tRs~Gd~~~~- 306 (908)
+.|||.||+.++++|+.||+..+ | .||..+....+++-| +.+||||||..+|
T Consensus 239 A~qLS~dHn~~ne~Ev~Rir~eH--------------P------------dd~~~vv~~~~RvkG~L~vsRAfGd~~lK~ 292 (390)
T KOG0700|consen 239 AVQLSTDHNASNEDEVRRIRSEH--------------P------------DDPHIVVNKHWRVKGILQVSRAFGDGYLKW 292 (390)
T ss_pred EEecChhhccccHHHHHHHHHhC--------------C------------CCcceEeeccceeeEEEEeeeeccceeecc
Confidence 99999999999999999999875 2 233333333335555 8999999998655
Q ss_pred -------------------cCCccccceEEEEEeCCCCCEEEEEcCccccccChHHHHHHHhcc----CCHHHHHHHHHH
Q 002560 307 -------------------TIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKY----KDPRDACAAIVA 363 (908)
Q Consensus 307 -------------------~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v~~~----~~~~~~a~~Lv~ 363 (908)
+|+++++|+|+.++|.|.|+|||||||||||+|+|+|++.+|..+ ..-+.+|+.|++
T Consensus 293 ~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr 372 (390)
T KOG0700|consen 293 PEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIR 372 (390)
T ss_pred hhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999999999885 234568999999
Q ss_pred HHHHHHHh
Q 002560 364 ESYRLWLQ 371 (908)
Q Consensus 364 ~a~~~~~~ 371 (908)
.|+.+...
T Consensus 373 ~aL~~aak 380 (390)
T KOG0700|consen 373 HALGRAAK 380 (390)
T ss_pred HHHhhhhh
Confidence 99986433
|
|
| >PRK14559 putative protein serine/threonine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=344.69 Aligned_cols=254 Identities=20% Similarity=0.263 Sum_probs=193.8
Q ss_pred EEeeCCCeeEEEEEEecccCCCCCCCCCCcceEEEecCCC-----C---CCCcEEEEEecCCCcC--hHHHHHHHHHHHH
Q 002560 86 VKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFG-----T---SQDDHFFGVFDGHGEF--GAQCSQFVKRKLC 155 (908)
Q Consensus 86 ~~~~~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~-----~---~~~~~~~~V~DGhGg~--G~~as~~~~~~l~ 155 (908)
..+|-.-+.+.++++|++|. .|+.|||++.+..... . .....+|+|||||||+ |+.||+++++.|.
T Consensus 366 ~~lp~~l~~l~~a~~Td~G~----~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~ 441 (645)
T PRK14559 366 AVLPMQLVSLEDAGRTDVGR----QRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQ 441 (645)
T ss_pred ccccccceeEEEEEECCCCC----CCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHH
Confidence 33454556789999999994 6999999987754310 0 1245799999999997 9999999999999
Q ss_pred HHHHhcCCcchhHHHHHHHHHHHHHHHHHhccC-----CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEE
Q 002560 156 ENLLRNNKFHEDAVDACHSSYLTTNSQLHADVL-----DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAV 230 (908)
Q Consensus 156 ~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~-----~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~ 230 (908)
+.+...........+.++++|..+|..|.+... +...||||++++++.++++|+|||||||+|++++++ ...
T Consensus 442 ~~~~~~~~~~~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g---~l~ 518 (645)
T PRK14559 442 QYFQQHWQDELPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG---GLE 518 (645)
T ss_pred HHHHhhhcccccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC---eEE
Confidence 887654322223356799999999999976421 234699999999999999999999999999986543 278
Q ss_pred eCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCc
Q 002560 231 DLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGV 310 (908)
Q Consensus 231 ~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v 310 (908)
+||.||++.. |+.+.| + +...+..+|.+ +++|||||+...+
T Consensus 519 QLT~DHs~~~-----~lv~~G--i------------------~~~~a~~~p~~----------~~LTrALG~~~~~---- 559 (645)
T PRK14559 519 QLTVDHEVGQ-----REIQRG--V------------------EPQIAYARPDA----------YQLTQALGPRDNS---- 559 (645)
T ss_pred EeCCCCCHHH-----HHHHhC--C------------------CHHHHhcCccc----------ceeeeccCCCCCC----
Confidence 9999998753 233333 1 11122334433 8999999986433
Q ss_pred cccceEEEEEeCCCCCEEEEEcCcccc--ccCh---HHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Q 002560 311 VANPEIVVWELTNDHPFFVLASDGVFE--FLSS---QAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVH 385 (908)
Q Consensus 311 ~~~Pdi~~~~l~~~d~flvlaSDGl~d--~l~~---~ei~~~v~~~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~ 385 (908)
..+|++..++++++|. |||||||||| .+.+ +++..++....+++++|+.|++.|+.+ |++||||+|||+
T Consensus 560 ~l~Pdi~~~~L~~gD~-lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~-----gg~DNITvIvV~ 633 (645)
T PRK14559 560 AIQPDIQFLEIEEDTL-LLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQY-----NGHDNITAILVR 633 (645)
T ss_pred cccceEEEEEcCCCCE-EEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----CCCCcEEEEEEE
Confidence 2589999999998765 6999999999 4554 455667777778999999999999986 899999999999
Q ss_pred cCCCCC
Q 002560 386 INGLKN 391 (908)
Q Consensus 386 ~~~~~~ 391 (908)
+...+.
T Consensus 634 l~~~p~ 639 (645)
T PRK14559 634 LKVRPQ 639 (645)
T ss_pred eccCCC
Confidence 986654
|
|
| >KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=300.60 Aligned_cols=163 Identities=34% Similarity=0.490 Sum_probs=136.9
Q ss_pred CcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCcccCC
Q 002560 193 SGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWG 272 (908)
Q Consensus 193 ~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g 272 (908)
+||||+++++.+++|+|||.||||||++|.|. +.++|.||+|.+.-|..||.++||+|.-..
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~Gk----AvdmS~DHKPEDevE~~RI~~AGG~vtlDG-------------- 391 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGK----AVDMSVDHKPEDEVETNRIHAAGGQVTLDG-------------- 391 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCc----eeecccCCCcccHHHHHHHHhcCCeEeecc--------------
Confidence 69999999999999999999999999999886 899999999999999999999999995321
Q ss_pred CCCCCCCCCCceeccCCCcCccccccccCcccccc--------CCccccceEEEEEeCCCCCEEEEEcCccccccChHHH
Q 002560 273 TEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAET--------IGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAV 344 (908)
Q Consensus 273 ~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~--------~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei 344 (908)
+.-+|+.++|+|||..+|. ..|++-|||...-|+|.|.|+||||||+|++|+.+++
T Consensus 392 ----------------RVNGGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeV 455 (542)
T KOG0699|consen 392 ----------------RVNGGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEV 455 (542)
T ss_pred ----------------eecCccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHH
Confidence 1122589999999998764 4589999999999999999999999999999999999
Q ss_pred HHHHhc----cCCHHHHHHHHHHHHHHHHH-hcCCCCCCeEEEEEEcCCC
Q 002560 345 VDMVAK----YKDPRDACAAIVAESYRLWL-QYETRTDDITVIVVHINGL 389 (908)
Q Consensus 345 ~~~v~~----~~~~~~~a~~Lv~~a~~~~~-~~~g~~DNiTvivv~~~~~ 389 (908)
+++|+. ......+|..|....+.-.- ..+.+.||+|||++.|...
T Consensus 456 VdFvr~~l~~n~~ls~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 456 VDFVRDLLAKNSSLSEICEELCDACLAPSTDGDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHhhcCCCCCCCCcCCCcceEEEEEeccc
Confidence 999865 34556666666666654210 1124689999999999854
|
|
| >smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=283.83 Aligned_cols=239 Identities=39% Similarity=0.596 Sum_probs=197.6
Q ss_pred EEEEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcc----hhHHH
Q 002560 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFH----EDAVD 170 (908)
Q Consensus 95 ~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~----~~~~~ 170 (908)
+.++..+..| .|..|||++++.... ..+..+|+|||||| |+.+|+++++.+.+.+....... ..+..
T Consensus 6 ~~~~~~~~~~-----~r~~neD~~~~~~~~--~~~~~~~~v~DG~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (255)
T smart00332 6 LRYGLSSMQG-----VRKPMEDAHVITPDL--SDSGAFFGVFDGHG--GSEAAKFLSKNLPEILAEELIKHKDELEDVEE 76 (255)
T ss_pred eeEEEecCCC-----CCCCCcceEEEeccC--CCCeEEEEEEeCCC--cHHHHHHHHHHHHHHHHHhHhhcccchhHHHH
Confidence 4566666666 799999999886542 25678999999999 99999999999998887653322 25778
Q ss_pred HHHHHHHHHHHHHHhccCC---CCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHH
Q 002560 171 ACHSSYLTTNSQLHADVLD---DSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERV 247 (908)
Q Consensus 171 ~l~~~~~~~~~~i~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri 247 (908)
.|++++..++..+...... ...+|||++++++.+++++++|+||||+|+++++. ..+||.||++.++.|..||
T Consensus 77 ~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~----~~~lt~dh~~~~~~~~~~i 152 (255)
T smart00332 77 ALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGK----AVQLTEDHKPSNEDERARI 152 (255)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCc----eeEcCCCCCCcCHHHHHHH
Confidence 8999999999999876332 24689999999999999999999999999999765 5789999999999999999
Q ss_pred HHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEe-CCCCC
Q 002560 248 KLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWEL-TNDHP 326 (908)
Q Consensus 248 ~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l-~~~d~ 326 (908)
...++.+... .+|.+ +.+||++|+...+ ++++.+|++...++ .++|.
T Consensus 153 ~~~~~~~~~~---------------------~~~~~----------~~lt~~~g~~~~~-~~i~~~p~~~~~~~~~~~d~ 200 (255)
T smart00332 153 EAAGGFVING---------------------RVNGV----------LALSRAIGDFFLK-PYVSAEPDVTVVELTEKDDF 200 (255)
T ss_pred HHcCCEEECC---------------------eECCe----------EecccccCCHhhc-CCeEeeeEEEEEEecCCCcE
Confidence 9998866310 11222 7899999987665 45889999999997 66565
Q ss_pred EEEEEcCccccccChHHHHHHHhccC---CHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Q 002560 327 FFVLASDGVFEFLSSQAVVDMVAKYK---DPRDACAAIVAESYRLWLQYETRTDDITVIVV 384 (908)
Q Consensus 327 flvlaSDGl~d~l~~~ei~~~v~~~~---~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv 384 (908)
||||||||||+++++++.+++.+.. ++..+|+.|++.|..+ +..||+|+|||
T Consensus 201 -ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~-----~~~Dn~T~ivv 255 (255)
T smart00332 201 -LILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALAR-----GSKDNITVIVV 255 (255)
T ss_pred -EEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHc-----CCCCCeEEEEC
Confidence 7999999999999999999998765 5999999999999885 88999999985
|
The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. |
| >cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=283.98 Aligned_cols=242 Identities=38% Similarity=0.572 Sum_probs=193.3
Q ss_pred EEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcC--hHHHHHHHHHHHHHHHHhcCC-cchhHHHHHH
Q 002560 97 YSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEF--GAQCSQFVKRKLCENLLRNNK-FHEDAVDACH 173 (908)
Q Consensus 97 ~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~--G~~as~~~~~~l~~~l~~~~~-~~~~~~~~l~ 173 (908)
++..+..| .|+.|||++++...... .++.+|+|||||||+ |..||+.+.+.+.+.+..... ....+...|+
T Consensus 3 ~~~~~~~g-----~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~ 76 (254)
T cd00143 3 AGVSDKGG-----DRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALR 76 (254)
T ss_pred eeeecCCC-----CCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Confidence 45556666 68899999998653211 367899999999964 555566655555555433221 2456678899
Q ss_pred HHHHHHHHHHHhccC---CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHHc
Q 002560 174 SSYLTTNSQLHADVL---DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLS 250 (908)
Q Consensus 174 ~~~~~~~~~i~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~~ 250 (908)
++|..+|..+..... ....+|||++++++.++.++++|+||||+|+++++. .+++|.||++.++.|..||...
T Consensus 77 ~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~----~~~lt~dh~~~~~~~~~~i~~~ 152 (254)
T cd00143 77 KAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGE----AVQLTKDHKPVNEEERERIEKA 152 (254)
T ss_pred HHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCc----eeEcCCCCCCcChHHHHHHHHc
Confidence 999999999987643 335689999999999999999999999999999875 6789999999999999999998
Q ss_pred CCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEe-CCCCCEEE
Q 002560 251 GARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWEL-TNDHPFFV 329 (908)
Q Consensus 251 gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l-~~~d~flv 329 (908)
++.+.. ..+|.+ +.+||+||+..++ +++..+|++...++ .++|. ||
T Consensus 153 ~~~~~~---------------------~~~~~~----------~~~t~~lG~~~~~-~~~~~~~~~~~~~l~~~~d~-il 199 (254)
T cd00143 153 GGRVSN---------------------GRVPGV----------LAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDF-LI 199 (254)
T ss_pred CCcEEe---------------------CEEcCc----------eeeccccCCcccc-CCEEcCCeEEEEEeCCCCcE-EE
Confidence 875420 011122 7899999998776 45789999999999 66665 79
Q ss_pred EEcCccccccChHHHHHHHhccC---CHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEc
Q 002560 330 LASDGVFEFLSSQAVVDMVAKYK---DPRDACAAIVAESYRLWLQYETRTDDITVIVVHI 386 (908)
Q Consensus 330 laSDGl~d~l~~~ei~~~v~~~~---~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~ 386 (908)
||||||||.++++++.+++.... +++++|+.|++.|..+ ++.||+|+|++++
T Consensus 200 l~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~-----~~~Dn~t~i~~~~ 254 (254)
T cd00143 200 LASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRR-----GSHDNITVVVVRL 254 (254)
T ss_pred EECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhC-----CCCCCEEEEEEeC
Confidence 99999999999999999998876 7999999999999886 7899999999975
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-30 Score=258.00 Aligned_cols=142 Identities=32% Similarity=0.443 Sum_probs=139.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
.++++|++++.||.|+||.|.+|+++.++..||+|++++..+.+.++.+++.+|..+|+.+. ||++++++.+|.+.+++
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~l 119 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNL 119 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeE
Confidence 68999999999999999999999999999999999999999999999999999999999996 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||||++||.|+.+++ ++|++..+++|++||+.||+|||+++|+||||||||||||++||+|
T Consensus 120 ymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iK 184 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIK 184 (355)
T ss_pred EEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEE
Confidence 99999999999999999 7999999999999999999999999999999999999999999987
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-30 Score=266.25 Aligned_cols=143 Identities=23% Similarity=0.366 Sum_probs=138.6
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
....++|+++++||+|+||+||+|+.+++++.||||+++|..+...+..+++..|..||..++ ||+|++++..|++..+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~k 99 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEK 99 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCe
Confidence 678999999999999999999999999999999999999999998888999999999999985 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+|+||+.||+|+..|+ +.|++..+++|+++|+.||.|||++|||||||||||||||.+||++
T Consensus 100 LylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~ 165 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIK 165 (357)
T ss_pred EEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEE
Confidence 999999999999999998 8899999999999999999999999999999999999999999985
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=270.78 Aligned_cols=143 Identities=25% Similarity=0.392 Sum_probs=138.9
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
+++++||++++.||+|+||.||+|+-+.||+.||||+++|+.....++.++++.|..+|... .+|+||++|..|++..+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~ 215 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEY 215 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCe
Confidence 45899999999999999999999999999999999999999999999999999999999996 69999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||++||++..+|. +.+++..+++|+++++.|++.||+.|+|||||||+|+|||..||+|
T Consensus 216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiK 281 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIK 281 (550)
T ss_pred eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEe
Confidence 999999999999999997 8899999999999999999999999999999999999999999997
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=269.35 Aligned_cols=144 Identities=26% Similarity=0.358 Sum_probs=140.0
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.....||.+++.||.|+|++|++|+.+.+++.||+|++.|..+.++.....+..|..+|.+|++||.|+++|.+|+|...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 55789999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+|+||+++|+|.++|+ +.|++..+++|++||+.||+|||++|||||||||||||||.+|++|
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEE
Confidence 999999999999999998 8999999999999999999999999999999999999999999986
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=247.14 Aligned_cols=146 Identities=24% Similarity=0.380 Sum_probs=139.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 761 SSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 761 ~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+.-..+.+++|++++.||.|.-|.||+|+...++..+|||++.+..+...+...++..|.+||+.+ +||+++.+|..|+
T Consensus 69 ~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fe 147 (459)
T KOG0610|consen 69 SKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFE 147 (459)
T ss_pred cCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheee
Confidence 345568899999999999999999999999999999999999999988888899999999999999 5999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 841 DSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
.+++.|++||||+||+|..+++ +.|++..+++|+++++.||+|||..|||+||||||||||-++|||
T Consensus 148 t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHI 218 (459)
T KOG0610|consen 148 TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHI 218 (459)
T ss_pred ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcE
Confidence 9999999999999999999987 679999999999999999999999999999999999999999997
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=241.29 Aligned_cols=136 Identities=18% Similarity=0.224 Sum_probs=127.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.+.+|.+.+.||+|+||.||+++++.++..+|||.+.+... ..+..+.+..|+++|+.++ ||||+.++++..+.+++|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEE
Confidence 46889999999999999999999999999999999988764 3345677899999999996 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
+|||||.||+|..+|+ +.+++..++.++.||+.||++||+++||||||||+||||+..
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~ 145 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTT 145 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccC
Confidence 9999999999999998 789999999999999999999999999999999999999875
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-26 Score=237.60 Aligned_cols=136 Identities=18% Similarity=0.192 Sum_probs=124.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhcc----chHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCL----GKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~----~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
-+.|.+.+.||+|+||.|-++..+.|++.||||++++...... .....+.+|++||++|+ ||+|++++++|...+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~-HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS-HPNIVRIKDFFEVPD 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC-CCCEEEEeeeeecCC
Confidence 4558888999999999999999999999999999998876552 23455789999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
..||||||+.||+|++.+- +.+.+...+.+++|++.|+.|||++||+||||||+|||+..+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~ 312 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND 312 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC
Confidence 9999999999999999986 789999999999999999999999999999999999999876
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-26 Score=252.31 Aligned_cols=145 Identities=22% Similarity=0.356 Sum_probs=139.7
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
..+++++|.++++||+|+||+|+++..+.+++.||||+++|..+......+..+.|.+|+...+.||+++++|.+|+.+.
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 57899999999999999999999999999999999999999999888899999999999999988999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|+||||+.||++..+.+ +.|++..+++|+++|+.||+|||++||||||||.+|||+|.+||+|
T Consensus 443 ~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~k 508 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVK 508 (694)
T ss_pred eEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEE
Confidence 9999999999999777666 8999999999999999999999999999999999999999999997
|
|
| >KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=217.09 Aligned_cols=216 Identities=26% Similarity=0.376 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCC-CCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHH
Q 002560 168 AVDACHSSYLTTNSQLHADVLD-DSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELER 246 (908)
Q Consensus 168 ~~~~l~~~~~~~~~~i~~~~~~-~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~R 246 (908)
+..||+.||+.+|.+|...... .-..|||+++++.--++||+||+|||||++.|+++ .++||.+.||. .|++|
T Consensus 220 ViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnde----irplS~efTPe--tERqR 293 (493)
T KOG1323|consen 220 VIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDE----IRPLSKEFTPE--TERQR 293 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCC----eeecccccCcH--HHHHH
Confidence 4679999999999999775322 23468999999999999999999999999999997 78899999884 57888
Q ss_pred HHHc--------CCEEeeecccccCC-----------CCCcccCCCCC--CCCCCCCceecc---CCCcCccccccccCc
Q 002560 247 VKLS--------GARVLTLDQIEGLK-----------NPDVQCWGTEE--GDDGDPPRLWVP---NGMYPGTAFTRSIGD 302 (908)
Q Consensus 247 i~~~--------gg~v~~~~~~~~~~-----------~~~~~~~g~~~--~~~~~~~r~~~~---~~~~~g~~~tRs~Gd 302 (908)
++.. |+.....+...++. +-....|..+. +.+-.++-+.-. .+.+.-+.+||.|||
T Consensus 294 lQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGD 373 (493)
T KOG1323|consen 294 LQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGD 373 (493)
T ss_pred HHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCc
Confidence 8754 33333222222221 11122343221 111112221111 112333689999999
Q ss_pred ccccc--------CCccccceEEEEEeCC----CCCEEEEEcCccccccChHHHHHHHhcc------CCHH---HHHHHH
Q 002560 303 SIAET--------IGVVANPEIVVWELTN----DHPFFVLASDGVFEFLSSQAVVDMVAKY------KDPR---DACAAI 361 (908)
Q Consensus 303 ~~~~~--------~~v~~~Pdi~~~~l~~----~d~flvlaSDGl~d~l~~~ei~~~v~~~------~~~~---~~a~~L 361 (908)
..++. +..++.|+|++++|.. .|+.+|||||||||+++|+|+..+|.+. .||. .+|+.|
T Consensus 374 H~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdl 453 (493)
T KOG1323|consen 374 HHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDL 453 (493)
T ss_pred ceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHH
Confidence 87653 4478999999999874 2456899999999999999999999764 2343 456677
Q ss_pred HHHHHHH-----HHhc---CCCCCCeEEEEEEcCCC
Q 002560 362 VAESYRL-----WLQY---ETRTDDITVIVVHINGL 389 (908)
Q Consensus 362 v~~a~~~-----~~~~---~g~~DNiTvivv~~~~~ 389 (908)
+..|... |.-. -|+.|||||.||-+..-
T Consensus 454 va~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 454 VAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred HHHhcCccCCCceeccCCCcCCCCceEEEEEeccCC
Confidence 7776532 3222 25789999999988654
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-25 Score=229.50 Aligned_cols=142 Identities=20% Similarity=0.246 Sum_probs=131.2
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
..+++++++.++.||+|..|+||+|+|+.|++.||+|++... .+....+++.+|+.+++.+ .||+|+.+|+.|..+.
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~ 150 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNG 150 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCC
Confidence 457888999999999999999999999999999999998432 2445678899999999998 5999999999999998
Q ss_pred e-EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 844 H-AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~-~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
. ++|+||||.+|+|.+++. +.++|.....++.++++||.|||+ ++||||||||+||||+.+|++|
T Consensus 151 ~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVK 219 (364)
T KOG0581|consen 151 EEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVK 219 (364)
T ss_pred ceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEE
Confidence 5 999999999999999998 889999999999999999999995 9999999999999999999987
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=239.34 Aligned_cols=139 Identities=20% Similarity=0.250 Sum_probs=135.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|+..+.||+|+|+.||.+++..+|+.||+|++.+..+.+..+.+.+.+|++|++.|+ ||||+++|.+|+|.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 66999999999999999999999999999999999999999999999999999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+|..++|..+++ +.++|.++++|+.||+.||.|||+++|||||||..|||++++-+||
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VK 158 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVK 158 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEE
Confidence 99999999999998 8899999999999999999999999999999999999999998876
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-25 Score=216.70 Aligned_cols=148 Identities=22% Similarity=0.206 Sum_probs=140.0
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 760 ISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 760 ~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.......++++|++.+.||+|.||.||+++.+.++..+|+|++.|+.+...+...++.+|++|-..|+ ||||.++|++|
T Consensus 13 ~~~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~f 91 (281)
T KOG0580|consen 13 SRATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYF 91 (281)
T ss_pred cccccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhhe
Confidence 34456789999999999999999999999999999999999999999888888899999999999996 99999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 840 ADSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+...+|+++||...|+|+..|. .++++..+..|+.|++.||.|+|.+++|||||||+|+|++..|.+|
T Consensus 92 hd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lk 164 (281)
T KOG0580|consen 92 HDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELK 164 (281)
T ss_pred eccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCee
Confidence 99999999999999999999997 5799999999999999999999999999999999999999999876
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-25 Score=229.09 Aligned_cols=139 Identities=19% Similarity=0.247 Sum_probs=134.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|++.+.||+|+||.|-++.....|+.||+|.++++.+.+....-++.+|++||..|+ ||||+.+|.+|++.+.+.||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN-HPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN-HPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC-CCceeehhhhhcCCceEEEE
Confidence 45999999999999999999999999999999999999999989999999999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||..+|+|++++. +.+++.+++.+++||+.|+.|+|.++++|||||.+|||+|.++++|
T Consensus 132 MEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiK 193 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIK 193 (668)
T ss_pred EEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCee
Confidence 99999999999998 8999999999999999999999999999999999999999999986
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-24 Score=234.92 Aligned_cols=143 Identities=22% Similarity=0.343 Sum_probs=135.7
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
+++-.-|..++.||-|+||+|.+|+..+|...||+|.+.|..+...++..++..|..||... ++++||++|..|+|+++
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdn 703 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDN 703 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCc
Confidence 34556688899999999999999999999999999999999988888999999999999997 59999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||+|++||++..+|- +.|+|..+++|++++..|+++.|..|+|||||||+|||||.+||+|
T Consensus 704 LYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIK 769 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIK 769 (1034)
T ss_pred eEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCcee
Confidence 999999999999999886 8999999999999999999999999999999999999999999997
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-25 Score=253.96 Aligned_cols=142 Identities=27% Similarity=0.367 Sum_probs=134.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
++-+||+++++||+|+||.|.+|+++.+++.||||+++|....+......|..|..+|..-+ +++|+.++..|+|.+++
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYL 150 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccce
Confidence 46789999999999999999999999999999999999988777667778999999999864 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+|||||+||+|..+|. .++|+..+++|+++|+.||..||+.|+|||||||+|||||..||+|
T Consensus 151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHik 215 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIK 215 (1317)
T ss_pred EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEe
Confidence 99999999999999998 6799999999999999999999999999999999999999999987
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-24 Score=216.51 Aligned_cols=139 Identities=11% Similarity=0.157 Sum_probs=122.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
|+.|+.+.++|+|+||.||+|+++.||+.||||.+.-+. .+....+-.++|+++|+++. |+|++.+..+|.....+++
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhL 78 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHL 78 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEE
Confidence 467899999999999999999999999999999986443 22334456789999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+|||+..-|..+-+ ..++...++.|+.|++.|+.|+|+++|||||||||||||+.+|.+|
T Consensus 79 VFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvK 141 (396)
T KOG0593|consen 79 VFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVK 141 (396)
T ss_pred EeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEE
Confidence 999997644444333 6799999999999999999999999999999999999999999876
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.5e-25 Score=221.04 Aligned_cols=145 Identities=21% Similarity=0.336 Sum_probs=138.5
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
-.++++++|..+++||+|.||+|.+|+.+.+++.||+|+++|..+.......+.+.|-++|+..+ ||++..+-..|+..
T Consensus 162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~ 240 (516)
T KOG0690|consen 162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQ 240 (516)
T ss_pred cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccC
Confidence 34678999999999999999999999999999999999999998888888899999999999985 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.+|+||||..||.|+-.|. ..|++..+++|.++|+.||.|||+++||+||||.+|+|+|.+||+|
T Consensus 241 drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIK 308 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIK 308 (516)
T ss_pred ceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceE
Confidence 99999999999999999987 7899999999999999999999999999999999999999999987
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=223.13 Aligned_cols=144 Identities=23% Similarity=0.276 Sum_probs=126.9
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc-----------cchHHHHHHHHHHHHhcCCCCcc
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----------LGKEVQVLKEKNLMKSVSPSACV 832 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~-----------~~~~~~~~~E~~il~~l~~~~~i 832 (908)
.+..+++|++.+.||+|.||.|.++++..+++.||||++.+..... ....+.+.+|+.||+++ +||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nV 170 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNV 170 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCe
Confidence 3457999999999999999999999999999999999998765432 11236899999999999 59999
Q ss_pred ceeeeeeccC--CeEEEEEecCCCCcHHHHHc-CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 833 PQILCTCADS--MHAGLLLNTYLACPLASILH-TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 833 ~~~~~~~~~~--~~~~iv~e~~~gg~L~~~l~-~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++.+..+. +++|||+|||..|.+...=. +. +++.+++.|+..++.||+|||.+|||||||||+|+||+++|++|
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 9999998764 68999999999888765433 55 99999999999999999999999999999999999999999987
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6e-23 Score=227.44 Aligned_cols=143 Identities=19% Similarity=0.290 Sum_probs=130.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhcc--chHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCL--GKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~--~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
.....|.+.+.||+|+||.|+++++..++..+|+|++.+...... ...+.+.+|+.+++.+.+||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 457889999999999999999999999999999998877533211 345677789999999977999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC-CccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~-g~vK 908 (908)
.+|+||||+.||+|++++. +++.|..++.++.|++.|++|||++||+||||||||||++.+ +++|
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~K 161 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLK 161 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEE
Confidence 9999999999999999997 889999999999999999999999999999999999999999 8876
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-23 Score=224.28 Aligned_cols=140 Identities=14% Similarity=0.199 Sum_probs=125.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--C
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--M 843 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~ 843 (908)
...+.|+.++.||+|+||.||++++..+|+.||+|.+..... +.+......+|+.||++|. ||||+++.+...+. .
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~ 191 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLD-HPNIIKLEEIVTSKLSG 191 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcC-CCcccceeeEEEecCCc
Confidence 356789999999999999999999999999999999987553 3445567789999999995 99999999887665 7
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|||+|||+. +|.-++. -.|++.+++.|+.||+.||+|+|++||+|||||.+|||||.+|.+|
T Consensus 192 siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LK 258 (560)
T KOG0600|consen 192 SIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLK 258 (560)
T ss_pred eEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEE
Confidence 89999999965 8888887 3799999999999999999999999999999999999999999986
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-24 Score=215.12 Aligned_cols=143 Identities=16% Similarity=0.199 Sum_probs=128.1
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee-eeccC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC-TCADS 842 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~-~~~~~ 842 (908)
...++.+|+++++||+|+||.||+|++..++..+|+|.+.-. ..+....+.+..|+.+|++|+ ||||+++|. .|..+
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~ 91 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLN-HPNIVQYYAHSFIED 91 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcC-CchHHHHHHHhhhcc
Confidence 355789999999999999999999999999999999998743 344556778999999999996 999999998 56655
Q ss_pred Ce-EEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh--CC--cEecCCCCCcEEEcCCCccC
Q 002560 843 MH-AGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHK--RG--VLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~-~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~--~g--IiHrDIKp~NILi~~~g~vK 908 (908)
+. ++|+||||.+|+|.++++ +.+++..++.|+.|++.||..+|+ .. |+||||||.||+|+.+|.+|
T Consensus 92 ~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvK 168 (375)
T KOG0591|consen 92 NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVK 168 (375)
T ss_pred chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCcee
Confidence 55 999999999999999997 569999999999999999999999 44 99999999999999999886
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-23 Score=222.65 Aligned_cols=140 Identities=14% Similarity=0.269 Sum_probs=124.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-e
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM-H 844 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~-~ 844 (908)
+-++.|.+++.||.|+||.||+++.+.++..||+|.+++....- ..-.-++|+..|++++.||||+++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~--ee~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW--EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH--HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 35688999999999999999999999999999999997755321 22335789999999988999999999999888 9
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||| .++|+++++ ..|++..++.|+.||++||.|+|.+|+.|||+||||||+.....+|
T Consensus 85 L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iK 150 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIK 150 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeE
Confidence 99999999 579999998 6799999999999999999999999999999999999998654443
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=201.23 Aligned_cols=137 Identities=14% Similarity=0.190 Sum_probs=124.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|...+.||+|.||.||++++..||+.+|+|.++..... .+......+|+..|+.+. |+||+.+.+.|...+.+.+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-dGi~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-DGINRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-cCccHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence 4678889999999999999999999999999999876432 334557889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||++ .+|...++ ..++...++.|+.+++.||.|||++.|+||||||.|+||+.+|.+|
T Consensus 80 fEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lK 141 (318)
T KOG0659|consen 80 FEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLK 141 (318)
T ss_pred EEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEE
Confidence 99996 59999998 5689999999999999999999999999999999999999999887
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-22 Score=224.50 Aligned_cols=139 Identities=22% Similarity=0.379 Sum_probs=129.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++ ||+|++++..+.+..++|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-SLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCeEEEE
Confidence 47999999999999999999999999999999998766555556678889999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++||+|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vk 141 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVK 141 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEE
Confidence 99999999999997 7799999999999999999999999999999999999999998875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.8e-23 Score=221.20 Aligned_cols=138 Identities=19% Similarity=0.233 Sum_probs=129.0
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|.+.+.||+|+||.||+++.+.+.+.||+|.+.|.... .+....+.+|++|++.++ ||||+.++++|+...++|+
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~v 78 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWV 78 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEE
Confidence 57899999999999999999999999999999999886533 345678999999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||+.| +|+.+|. +.++|+.++.++.+++.||.|||+++|+|||+||.|||++..|++|
T Consensus 79 Vte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~K 140 (808)
T KOG0597|consen 79 VTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLK 140 (808)
T ss_pred Eehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCcee
Confidence 9999977 9999998 8999999999999999999999999999999999999999999886
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-22 Score=219.45 Aligned_cols=145 Identities=22% Similarity=0.420 Sum_probs=133.7
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
.....+++|++.+.||+|+||.||+|+++.+++.+|+|++.+...........+.+|+.+++.++ ||||+++++.+.+.
T Consensus 12 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~ 90 (329)
T PTZ00263 12 TSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDE 90 (329)
T ss_pred cCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEcC
Confidence 34567899999999999999999999999999999999998776555556678899999999995 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.+|++|||+++++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k 158 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVK 158 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEE
Confidence 99999999999999999997 6799999999999999999999999999999999999999998775
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.1e-22 Score=208.99 Aligned_cols=140 Identities=17% Similarity=0.218 Sum_probs=131.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||.|..+.||+++...++..||||++....+... ...+.+|+..|+.+ +||||++++..|..+..+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~L 99 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLI-DHPNIVTYHCSFVVDSEL 99 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhc-CCCCcceEEEEEEeccee
Confidence 467899999999999999999999999999999999988776543 78899999999998 599999999999999999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||.||.+|++.+++. ..++|..+..+.++++.||.|||.+|.||||||+.||||+.+|.||
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~Vk 166 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVK 166 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEE
Confidence 99999999999999997 5699999999999999999999999999999999999999999886
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=6e-22 Score=224.14 Aligned_cols=139 Identities=23% Similarity=0.368 Sum_probs=128.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++ ||||+++++++.+..++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEE
Confidence 47999999999999999999999999999999998766555556678899999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. +.+++..++.|+.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~k 141 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIK 141 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEE
Confidence 99999999999987 7799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.3e-22 Score=223.16 Aligned_cols=138 Identities=22% Similarity=0.319 Sum_probs=128.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+. ||+|++++..+.+..++|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC-CCCeeeeEEEEecCCEEEEEE
Confidence 6899999999999999999999999999999998776655566778999999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||++||+|.+++. +.+++..++.++.||+.||.|||++||+||||||+||||+.+|++|
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~k 141 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIK 141 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEE
Confidence 9999999999987 6799999999999999999999999999999999999999988775
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.3e-22 Score=222.00 Aligned_cols=139 Identities=22% Similarity=0.390 Sum_probs=128.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++..++ ||||+++++.+.+..++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEE
Confidence 47999999999999999999999999999999998766555556677889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~k 141 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIK 141 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEE
Confidence 99999999999987 6799999999999999999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-22 Score=222.43 Aligned_cols=141 Identities=17% Similarity=0.208 Sum_probs=132.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.+.-|++++.||.|+.|.|.++++..||+..|||++.+...........+.+|+-||+.+. ||||+++|+.|.++.++|
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~ly 88 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQHLY 88 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc-CCCeeeeeeeeccCceEE
Confidence 5677999999999999999999999999999999999875444556678999999999996 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||++||.|+++|- +++++.++..+++||+.|+.|+|..+|+||||||+|+|||..+++|
T Consensus 89 lvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIK 152 (786)
T KOG0588|consen 89 LVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIK 152 (786)
T ss_pred EEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEe
Confidence 9999999999999997 8999999999999999999999999999999999999999998876
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=221.91 Aligned_cols=139 Identities=22% Similarity=0.352 Sum_probs=128.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+. ||+|++++..|.+.+++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999998766544555677889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ik 141 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIK 141 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEE
Confidence 99999999999997 6789999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=221.89 Aligned_cols=138 Identities=22% Similarity=0.334 Sum_probs=128.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++++.||+|+||.||+|++..+++.+|+|++.+...........+.+|+.+++.+. ||+|++++..+.+.+++|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCEEEEEE
Confidence 5899999999999999999999999999999998776555566778999999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++|+|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|++|
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~k 141 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIK 141 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 9999999999987 6789999999999999999999999999999999999999998875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-22 Score=205.24 Aligned_cols=140 Identities=16% Similarity=0.220 Sum_probs=124.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec--cCC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA--DSM 843 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~--~~~ 843 (908)
-++++|+.+..|++|+||.||+++++.|++.||+|.++... ...+..-.-++|+.+|.+++ ||||+.+-.... +-+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~-H~NIV~vkEVVvG~~~d 150 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKAR-HPNIVEVKEVVVGSNMD 150 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcC-CCCeeeeEEEEeccccc
Confidence 36899999999999999999999999999999999998765 23333445689999999985 999999987653 456
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|||||||+. +|..+|. ++|...+++.++.|++.|++|||.+.|+||||||+|+|+++.|.+|
T Consensus 151 ~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lK 217 (419)
T KOG0663|consen 151 KIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILK 217 (419)
T ss_pred eeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEE
Confidence 79999999964 8999887 6899999999999999999999999999999999999999999876
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=216.19 Aligned_cols=150 Identities=19% Similarity=0.330 Sum_probs=134.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEEECCCC-ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceee
Q 002560 758 IDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSE-NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQIL 836 (908)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~-~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~ 836 (908)
.++.....+.+++|++.+.||+|+||.||+|.+..++ ..+|+|++.+...........+.+|+.++..++ ||||++++
T Consensus 19 ~~~~~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~ 97 (340)
T PTZ00426 19 KEPKRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLY 97 (340)
T ss_pred cccccCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCCcceE
Confidence 3345556788999999999999999999999876655 689999998776555556678899999999995 99999999
Q ss_pred eeeccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 837 CTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 837 ~~~~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++.+...+|++|||+++|+|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus 98 ~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ik 171 (340)
T PTZ00426 98 GSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIK 171 (340)
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEE
Confidence 99999999999999999999999997 6799999999999999999999999999999999999999998775
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=218.75 Aligned_cols=142 Identities=26% Similarity=0.395 Sum_probs=129.8
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++++..+++.+|+|++.+...........+.+|+.+++.++ ||+|+++++.+.+..++
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEE
Confidence 35688999999999999999999999999999999998765544445567888999999985 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||||+++|+|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~k 182 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLK 182 (370)
T ss_pred EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEE
Confidence 99999999999999998 6799999999999999999999999999999999999999998875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-21 Score=218.01 Aligned_cols=139 Identities=22% Similarity=0.384 Sum_probs=128.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||+|.++.+++.||+|++.+...........+..|+.++..++ ||+|++++..+.+..++|+|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD-GAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999998766555556778899999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. +.+++..++.|+.|++.||.|||++||+||||||+|||++.+|++|
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vk 141 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVK 141 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEE
Confidence 99999999999987 6799999999999999999999999999999999999999998875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=212.11 Aligned_cols=139 Identities=29% Similarity=0.419 Sum_probs=127.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.+|+|++.............+.+|+.+++.++ ||||+++++.+.+..++|++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC-CCcHhhhHhhhccCCeEEEE
Confidence 47999999999999999999999999999999998765544455677889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~k 141 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIK 141 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEE
Confidence 99999999999997 6799999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-21 Score=217.88 Aligned_cols=143 Identities=26% Similarity=0.377 Sum_probs=130.8
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.++.++|++.+.||+|+||.||++++..+++.||+|++.+...........+.+|+.+++.++ ||+|+++++.+.+.++
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~ 117 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN-SEWIVQLHYAFQDDKY 117 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCE
Confidence 456889999999999999999999999999999999998765544445566788999999985 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||++||+|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~k 182 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 182 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEE
Confidence 999999999999999998 6799999999999999999999999999999999999999998775
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-22 Score=211.25 Aligned_cols=144 Identities=26% Similarity=0.404 Sum_probs=135.3
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
+.++.+.|..-++||+|+||.||-|+-+.||+.||+|.+.|..+.......-.++|..||++++ +++||.+-..|+..+
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-SPFIVSLAYAFETKD 258 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCC
Confidence 3567888999999999999999999999999999999999988888777888999999999995 899999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+||..|.||+|.-.|. ..|++..+++|+++|+.||++||+.+|++||+||+|||+|+.||++
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvR 327 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVR 327 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeE
Confidence 9999999999999988876 4799999999999999999999999999999999999999999985
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-21 Score=213.02 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=127.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++++.||+|+||.||+|++..+++.||+|++.+...........+..|..++..+.+|++|++++..+.+.+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 68999999999999999999999999999999987665555566778899999999877788999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|..++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 141 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIK 141 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEE
Confidence 9999999999987 6789999999999999999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=207.02 Aligned_cols=137 Identities=13% Similarity=0.243 Sum_probs=122.2
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC--eE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM--HA 845 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~--~~ 845 (908)
..+|...+.||+|+||.||++.+++++..+|+|.+.... ....+.+.+|+.+|.+++ ||+|+++++...... .+
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~ 91 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEY 91 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeee
Confidence 567899999999999999999999999999999987652 112567899999999997 999999999754444 69
Q ss_pred EEEEecCCCCcHHHHHc--C-CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCccC
Q 002560 846 GLLLNTYLACPLASILH--T-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~-~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~vK 908 (908)
+++|||+++|+|.+++. + .++++.++.|++||+.||.|||++|||||||||+|||++. +|.+|
T Consensus 92 ~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~K 158 (313)
T KOG0198|consen 92 NIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVK 158 (313)
T ss_pred EeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEE
Confidence 99999999999999998 4 7999999999999999999999999999999999999999 67765
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-21 Score=216.43 Aligned_cols=143 Identities=27% Similarity=0.369 Sum_probs=130.5
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+..++|++.+.||+|+||.||+|+++.+++.+|+|++.+...........+.+|+.+++.+ +||||++++..+.+..+
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRY 117 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCE
Confidence 45678999999999999999999999999999999999876554444556688899999998 49999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||+++++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++|
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ik 182 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 182 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEE
Confidence 999999999999999998 7799999999999999999999999999999999999999998875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.4e-21 Score=213.27 Aligned_cols=139 Identities=23% Similarity=0.368 Sum_probs=128.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.||+|++++...........+.+|+.++..++ ||||++++..+.+.++.|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999998776555556678899999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k 141 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIK 141 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEE
Confidence 99999999999997 6799999999999999999999999999999999999999998775
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.5e-21 Score=211.60 Aligned_cols=139 Identities=22% Similarity=0.388 Sum_probs=127.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++++..+++.||+|++.+...........+..|+.++..+ +|++|++++..+.+.+++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEE
Confidence 4799999999999999999999999999999999876555555566788899999998 599999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~k 142 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIR 142 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEE
Confidence 99999999999996 5799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.9e-21 Score=211.16 Aligned_cols=139 Identities=20% Similarity=0.271 Sum_probs=127.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||+|+++.+++.||+|++.+...........+..|..++..+.+|++|++++..+.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 47889999999999999999999999999999987665555556678889999998887899999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|..++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ik 141 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence 9999999999987 6799999999999999999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-21 Score=203.81 Aligned_cols=138 Identities=20% Similarity=0.235 Sum_probs=122.8
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCc-cceeeeeeccCC---
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC-VPQILCTCADSM--- 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~-i~~~~~~~~~~~--- 843 (908)
+..|+.++.||+|+||.||+++.+.+|+.||+|.++...-. ++......+|+.+|+.++ |+| |+.+++.+.+.+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhC-CCcceEEEEeeeeeccccc
Confidence 66788888999999999999999999999999998765422 344566789999999996 777 999999998877
Q ss_pred ---eEEEEEecCCCCcHHHHHc--C----CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 ---HAGLLLNTYLACPLASILH--T----PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ---~~~iv~e~~~gg~L~~~l~--~----~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+|+||+ ..+|..++. . .++...++.++.||+.||.|||+++|+||||||+||||+++|.+|
T Consensus 88 ~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lK 160 (323)
T KOG0594|consen 88 GIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLK 160 (323)
T ss_pred ccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEe
Confidence 899999999 469999997 2 478889999999999999999999999999999999999999886
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.2e-22 Score=200.37 Aligned_cols=145 Identities=22% Similarity=0.322 Sum_probs=139.0
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
..+.+++|.++++||+|+|.+|.+++++.|.+.||+|+++|..+.+.+....+..|..++.+.+.||+++-++..|+.+.
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes 324 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES 324 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc
Confidence 35789999999999999999999999999999999999999998888889999999999999988999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+|.||++||+|.-.++ .+++++.+++|..+|+.||.|||++|||+||||.+|+|+|..|++|
T Consensus 325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghik 391 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIK 391 (593)
T ss_pred eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCcee
Confidence 9999999999999988887 7899999999999999999999999999999999999999999987
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.8e-21 Score=210.57 Aligned_cols=139 Identities=22% Similarity=0.358 Sum_probs=126.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+++++.+++.||+|++.+...........+..|..++..+ +|++|++++..+.+.++.|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999999875544444556678899999888 499999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++||+|.+++. ..+++..++.++.|++.||+|||++||+||||||+|||++.+|.+|
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~k 142 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIR 142 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEE
Confidence 99999999999996 5789999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.3e-21 Score=209.68 Aligned_cols=139 Identities=19% Similarity=0.260 Sum_probs=127.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||+|++..+++.+|+|++.+..............|..++..+.+||+|++++..+.+.+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 68999999999999999999999999999999987665445556677888899888877999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++|+|..++. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~k 141 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEE
Confidence 9999999999987 6799999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.3e-21 Score=213.12 Aligned_cols=139 Identities=24% Similarity=0.388 Sum_probs=129.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++ ||+|++++..+.+.+++|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD-SPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC-CCCccchhhheecCCeEEEE
Confidence 47999999999999999999999999999999998876655566778899999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~k 141 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIK 141 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence 99999999999997 5799999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.9e-21 Score=210.23 Aligned_cols=133 Identities=23% Similarity=0.319 Sum_probs=122.0
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|..+++.++ ||||++++..+...+++|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999999999999999998766555555667889999999995 99999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~k 135 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIK 135 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEE
Confidence 99999987 6799999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.4e-22 Score=206.43 Aligned_cols=146 Identities=18% Similarity=0.247 Sum_probs=138.6
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
...+...+|.++.+||+|+||.|.++..+.+.+.||+|++++..+......+..+.|.++|....+.|++++++..|+.-
T Consensus 343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred ccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 34788999999999999999999999999999999999999998887778888899999999887799999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.+|+||||+.||+|.-.++ ++|.++.+.+|+++|+.||-+||++|||+||||.+|||+|.+||+|
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiK 490 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIK 490 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceE
Confidence 99999999999999998888 8999999999999999999999999999999999999999999987
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.9e-21 Score=209.94 Aligned_cols=137 Identities=18% Similarity=0.182 Sum_probs=128.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
-..|++.+.||+|.||.||+|+.+.+|+.+|+|++.+...........+.+|+.||+.+..||||+.+++.|.+...+|+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 45699999999999999999999999999999999998876665677899999999999779999999999999999999
Q ss_pred EEecCCCCcHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 848 LLNTYLACPLASILHTP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 848 v~e~~~gg~L~~~l~~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
|||+|.||+|++.+... +++..+..++.|++.++.|||+.||+||||||+|+|+...
T Consensus 114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~ 171 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASK 171 (382)
T ss_pred EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccc
Confidence 99999999999999854 9999999999999999999999999999999999999754
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=207.88 Aligned_cols=139 Identities=20% Similarity=0.355 Sum_probs=127.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.++.+++.+|+|++++...........+..|+.+++.+ +||+|++++..+.+.++.|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEE
Confidence 4799999999999999999999999999999999876654455566788899999987 599999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~k 142 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIK 142 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEE
Confidence 99999999999997 5699999999999999999999999999999999999999998875
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=208.01 Aligned_cols=133 Identities=23% Similarity=0.341 Sum_probs=121.6
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++++..+++.||+|++.+...........+.+|..+++.++ ||||+++++.|.....+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCC
Confidence 36999999999999999999999999998766555555667888999999995 99999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k 135 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 135 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEE
Confidence 99999887 6799999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-20 Score=207.91 Aligned_cols=133 Identities=23% Similarity=0.333 Sum_probs=121.9
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++++..+++.||+|++.+...........+.+|+.+++.+. ||+|++++..+...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999999999999999998766555556678889999999985 99999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~k 135 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIK 135 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEE
Confidence 99999887 6799999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=202.39 Aligned_cols=138 Identities=25% Similarity=0.380 Sum_probs=124.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.++..++ |+++++++..+.+.+.+|++|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEEEEEccCCeEEEEE
Confidence 3788999999999999999999999999999988766544444566889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~k 142 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIR 142 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEE
Confidence 9999999988874 3689999999999999999999999999999999999999888764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=207.76 Aligned_cols=134 Identities=22% Similarity=0.314 Sum_probs=123.0
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|++..+++.||+|++++...........+..|..++..+.+||||+++++.+.+...+|++|||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999999999999999998766555555677889999999987799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~k 136 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIK 136 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence 99999886 6899999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-20 Score=206.89 Aligned_cols=139 Identities=21% Similarity=0.375 Sum_probs=126.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+++++.+++.+|+|++.+...........+..|+.++..+ +|++|++++..+.+...+|+|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEE
Confidence 4799999999999999999999999999999999876544444555688899999888 599999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++|+|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++|
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~k 142 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIR 142 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEE
Confidence 99999999999996 5689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-20 Score=206.27 Aligned_cols=138 Identities=19% Similarity=0.300 Sum_probs=124.1
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeeccCCeEEEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~~~~~~iv 848 (908)
|++++.||+|+||.||++.+..+++.||+|++++...........+.+|+.++..++ +||||+++++++.+.+++|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 788999999999999999999999999999998766544455667888887765432 499999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~k 141 (324)
T cd05589 81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVK 141 (324)
T ss_pred EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEE
Confidence 99999999999887 7899999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=206.66 Aligned_cols=134 Identities=22% Similarity=0.322 Sum_probs=122.0
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|+++.+++.||+|++.+...........+..|..++..+.+||+|+++++.+.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999998766555555667888999998876799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~k 136 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCK 136 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence 99999887 6799999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-20 Score=205.09 Aligned_cols=131 Identities=24% Similarity=0.371 Sum_probs=120.7
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|+||.||+|++..+++.||+|++.+...........+.+|+.++..++ ||||++++..+.+.+.+|++|||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 799999999999999999999999998766555556677889999999995 9999999999999999999999999999
Q ss_pred HHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~k 133 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIA 133 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEE
Confidence 999997 6799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-20 Score=205.59 Aligned_cols=139 Identities=22% Similarity=0.340 Sum_probs=124.5
Q ss_pred ceEEEEEecCCCeEEEEEEEEC---CCCceEEEeeechhhhhc-cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKC-LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~~-~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+|++++.||+|+||.||+|+.. .+++.+|+|++.+..... ......+..|..++..+.+||+|++++..+...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999874 478899999998755332 334567888999999997899999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~k 145 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVV 145 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEE
Confidence 99999999999999986 6799999999999999999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-20 Score=205.94 Aligned_cols=134 Identities=22% Similarity=0.340 Sum_probs=122.4
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|+++.+++.||+|++.+...........+..|..++..+.+||+|+++++++.+.+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998766555556677888999998876799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~k 136 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCK 136 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEE
Confidence 99999887 6799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-20 Score=205.38 Aligned_cols=134 Identities=25% Similarity=0.404 Sum_probs=120.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+.+||+|+++++.+....++|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998765544445566777888887766799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~k 136 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIK 136 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEE
Confidence 99999987 6799999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.1e-20 Score=205.82 Aligned_cols=134 Identities=24% Similarity=0.335 Sum_probs=123.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|++..+++.+|+|++.+...........+..|..++..+.+||+|+.+++++.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998876555556677889999999987799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~k 136 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIK 136 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEE
Confidence 99999886 6799999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-20 Score=204.45 Aligned_cols=133 Identities=23% Similarity=0.340 Sum_probs=121.0
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|.+..+++.+|+|++.+...........+..|..++..+. ||||++++..+.....+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999999999999999998766555555667888999999985 99999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+|
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~k 136 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIK 136 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEE
Confidence 99999886 679999999999999999999997 7999999999999999998765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-20 Score=205.63 Aligned_cols=134 Identities=23% Similarity=0.322 Sum_probs=122.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++++..+++.+|+|++.+...........+..|..++..+.+||||+++++.+.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998776555555667889999998876799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~k 136 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK 136 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEE
Confidence 99998886 6799999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-20 Score=204.21 Aligned_cols=134 Identities=23% Similarity=0.353 Sum_probs=120.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|+++.+++.||+|++++..............|..++..+.+||+|+++++.+.+.+++|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999998765444445566788888888765799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~k 136 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIK 136 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence 99999987 6799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-20 Score=204.55 Aligned_cols=143 Identities=16% Similarity=0.215 Sum_probs=126.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEEECCCCce-EEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENF-LSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 762 ~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~-~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
....+...++.+.+.||.|+||+||++.+. |.. +|+|++......... ...+.+|+.+|.+++ ||||+++++++.
T Consensus 34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~-HpNIV~f~G~~~ 109 (362)
T KOG0192|consen 34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLR-HPNIVQFYGACT 109 (362)
T ss_pred cceecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCC-CCCeeeEEEEEc
Confidence 344566777888888999999999999885 444 999998876544433 778999999999995 999999999999
Q ss_pred cCC-eEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC-cEecCCCCCcEEEcCCC-ccC
Q 002560 841 DSM-HAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRG-VLYRGVSPDVLMLDKSG-HLQ 908 (908)
Q Consensus 841 ~~~-~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~g-IiHrDIKp~NILi~~~g-~vK 908 (908)
+.. .++|||||+++|+|..++. ..++...+..++.+|+.|++|||+++ ||||||||+|||++.++ ++|
T Consensus 110 ~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~K 184 (362)
T KOG0192|consen 110 SPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLK 184 (362)
T ss_pred CCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEE
Confidence 887 7999999999999999995 57999999999999999999999999 99999999999999997 765
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.3e-20 Score=200.18 Aligned_cols=138 Identities=17% Similarity=0.217 Sum_probs=122.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
++++|++.+.||.|+||.||++.+..+++.+|+|.++.... ......+.+|+.+++.++ ||||+++++++.+....|
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 79 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLK-HANIVTLHDIIHTERCLT 79 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEE
Confidence 47889999999999999999999999999999999865432 223456778999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+.+ +|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~k 143 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELK 143 (288)
T ss_pred EEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence 99999975 8998886 4579999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-19 Score=180.74 Aligned_cols=211 Identities=21% Similarity=0.351 Sum_probs=143.4
Q ss_pred CCCCCcceEEEecCCCCCCCcEEEEEecCCCcC---hHHHHHHHHHHHHHH--HHhcCC-cchhHHHHHHHHHHHHHHHH
Q 002560 110 LDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEF---GAQCSQFVKRKLCEN--LLRNNK-FHEDAVDACHSSYLTTNSQL 183 (908)
Q Consensus 110 ~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~---G~~as~~~~~~l~~~--l~~~~~-~~~~~~~~l~~~~~~~~~~i 183 (908)
.-+..||++++..+ ....+.|||||+||| |--++.|..+.+... +.+... ...++...|..|+.++
T Consensus 87 ~~~~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l---- 158 (330)
T KOG1379|consen 87 VGKGGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAEL---- 158 (330)
T ss_pred CCCCCCcceeeccC----cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHH----
Confidence 34457999999653 456799999999998 877888866655443 222222 3347788888777654
Q ss_pred HhccCCCCCCcceEEEEEEE--CCEEEEEEeccceEEEEEEcCCeeEEEeCCCCC--CCCChhHHHHHHHcCCEEeeecc
Q 002560 184 HADVLDDSMSGTTAVTVLVR--GRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQ--TPFREDELERVKLSGARVLTLDQ 259 (908)
Q Consensus 184 ~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh--~~~~~~E~~Ri~~~gg~v~~~~~ 259 (908)
.+. ......+|||+++++. +++||+||+|||-..++|+|.. ..-|..| -.+.| .|
T Consensus 159 ~~~-~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~v----v~~S~~Q~H~FN~P----------------yQ 217 (330)
T KOG1379|consen 159 KSQ-KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKV----VFRSPEQQHYFNTP----------------YQ 217 (330)
T ss_pred hhc-CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEE----EEcCchheeccCCc----------------ee
Confidence 222 1122357888888887 8999999999999999998852 2223322 11111 01
Q ss_pred cccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEEEEcCcccccc
Q 002560 260 IEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFL 339 (908)
Q Consensus 260 ~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l 339 (908)
+. -||+ ....+++|. .-.-+++.++++++|. ||||||||||.|
T Consensus 218 Ls------------------~~p~-----------~~~~~~~d~-------p~~ad~~~~~v~~GDv-IilATDGlfDNl 260 (330)
T KOG1379|consen 218 LS------------------SPPE-----------GYSSYISDV-------PDSADVTSFDVQKGDV-IILATDGLFDNL 260 (330)
T ss_pred ec------------------cCCc-----------cccccccCC-------ccccceEEEeccCCCE-EEEecccccccc
Confidence 10 0000 002223332 2345788999999999 799999999999
Q ss_pred ChHHHHHHHhc-----cCCHHHHHHHHHHHHHHHHHh------------------cCCCCCCeEEEEEEc
Q 002560 340 SSQAVVDMVAK-----YKDPRDACAAIVAESYRLWLQ------------------YETRTDDITVIVVHI 386 (908)
Q Consensus 340 ~~~ei~~~v~~-----~~~~~~~a~~Lv~~a~~~~~~------------------~~g~~DNiTvivv~~ 386 (908)
.+++|..++.. ..+++..|+.+++.|...... ++|..||||+||..+
T Consensus 261 ~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 261 PEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 99999999864 357899999999999876221 245689999999753
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.3e-21 Score=192.20 Aligned_cols=134 Identities=16% Similarity=0.223 Sum_probs=122.5
Q ss_pred eEEE-EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 771 MEWR-KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 771 ~~~~-~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
|++. +.||+|+|+.|-.|....++..||+|++.|.. .....++.+|++++.++.+|+||++++++|+++..+|+||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 5543 57999999999999999999999999998763 3456789999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
|-+.||+|...|. +.|++.++..++..|+.||.|||.+||.||||||+|||-.+..++
T Consensus 156 EKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKV 215 (463)
T ss_pred ecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCc
Confidence 9999999999997 789999999999999999999999999999999999998765543
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.2e-20 Score=198.00 Aligned_cols=138 Identities=25% Similarity=0.388 Sum_probs=124.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||++.+..+++.+|+|++.............+.+|+.+++.++ ||+|+++++.+.+.+++|++|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC-CCCEeeeeeeecCCCeEEEEE
Confidence 4889999999999999999999999999999997765444444556788999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~ 142 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIR 142 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEE
Confidence 9999999998875 4589999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.1e-21 Score=190.43 Aligned_cols=141 Identities=14% Similarity=0.186 Sum_probs=126.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh-----ccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK-----CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
.+.|.-.+.||.|..+.|.+|.++.+++.+|+|++...... -....+....|+.||+++.+||+|+.+.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 56677788999999999999999999999999998643321 1234566788999999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++|+|+|.|+.|.|+++|. -.+++..++.+++|++.|+.|||.++|+||||||+|||+|++.++|
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~ 163 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIK 163 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceE
Confidence 99999999999999999998 5799999999999999999999999999999999999999988775
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.2e-20 Score=201.36 Aligned_cols=134 Identities=22% Similarity=0.347 Sum_probs=120.1
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|++..+++.||+|++++..............|..++..+.+||+|+++++.+.+.+.+|++|||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999998765443444566778888888765699999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~k 136 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIK 136 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEE
Confidence 99999997 5799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.8e-20 Score=201.82 Aligned_cols=134 Identities=22% Similarity=0.326 Sum_probs=122.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+.+||||+++++.+.+.+++|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998876555555667888999998886799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~k 136 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIK 136 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEE
Confidence 99999887 5799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.9e-21 Score=176.52 Aligned_cols=137 Identities=17% Similarity=0.216 Sum_probs=124.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
.+|.-.++||+|+||+||+++++.+++.+|+|.++... .+++.....++|+.+++.++ |.||+++++....++.+-+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldd-ddegvpssalreicllkelk-hknivrl~dvlhsdkkltlv 79 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccC-CCCCCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEe
Confidence 45666789999999999999999999999999987654 33455667899999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||| ..+|..+.. +.++...++.++.|++.||.|+|+++++|||+||.|+||+.+|.+|
T Consensus 80 fe~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelk 141 (292)
T KOG0662|consen 80 FEFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELK 141 (292)
T ss_pred HHHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEE
Confidence 9999 568888876 8899999999999999999999999999999999999999999886
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.5e-20 Score=202.91 Aligned_cols=142 Identities=16% Similarity=0.188 Sum_probs=131.2
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
......|.+.+.||+|.|+.|.++++..++..+|||++.+...... ....+.+|+++|+.++ ||||+++|.+......
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-~~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-KRQKLGREVDIMKSLN-HPNIVKLFSVIETEAT 129 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-HHHHHHHHHHHHHhcC-Ccceeeeeeeeeecce
Confidence 4467889999999999999999999999999999999998876554 3455899999999996 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||+.+|.+++++. +.+.+..++.++.|++.|++|||+++|+|||||++||||+.+-++|
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnik 195 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIK 195 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccccee
Confidence 999999999999999997 7888899999999999999999999999999999999999887665
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.1e-20 Score=201.98 Aligned_cols=133 Identities=22% Similarity=0.315 Sum_probs=117.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHH-HHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNL-MKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~i-l~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
+.||+|+||.||++.+..+++.+|+|++.+...........+..|..+ ++.+ +||||++++..+...+.+|++|||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCCC
Confidence 369999999999999999999999999987654444445566677665 5556 59999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~k 136 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVV 136 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEE
Confidence 999998887 6799999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=201.38 Aligned_cols=133 Identities=22% Similarity=0.346 Sum_probs=117.9
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHH-HHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNL-MKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~i-l~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
+.||+|+||.||++.+..+++.+|+|++.+...........+..|..+ ++.+ +||||+++++.+.+.+..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 369999999999999999999999999987665444445566677665 4566 59999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~k 136 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVV 136 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEE
Confidence 999999987 6799999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=202.02 Aligned_cols=132 Identities=22% Similarity=0.341 Sum_probs=118.2
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeeccCCeEEEEEecCCC
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
||+|+||.||++++..+++.+|+|++.+..............|..++..+. +||+|+.++..+.+...+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999998766554445556677877777653 699999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~k 136 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIA 136 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEE
Confidence 99999887 6799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=200.77 Aligned_cols=133 Identities=22% Similarity=0.332 Sum_probs=117.6
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHH-HHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKN-LMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~-il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
+.||+|+||.||+|++..+++.||+|++.+...........+..|.. +++.+ +||||++++..+.+.+..|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36999999999999999999999999998766544444556666665 46666 59999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|...+. ..+++..++.++.||+.||.|||++||+||||||+||||+.+|.+|
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~k 136 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVV 136 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEE
Confidence 999998886 6799999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=218.12 Aligned_cols=141 Identities=19% Similarity=0.295 Sum_probs=129.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.+++|++++.||.|+||.||+|.+..+++.||+|++.+...........+..|+.++..++ ||+|++++..+....++|
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~ 80 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK-SPFIVHLYYSLQSANNVY 80 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC-CCCcCeEEEEEEECCEEE
Confidence 4789999999999999999999999999999999998765555555677889999999985 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||||+.|++|.+++. +.+++..++.|+.||+.||.|||.+||+||||||+||||+.+|++|
T Consensus 81 lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk 144 (669)
T cd05610 81 LVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIK 144 (669)
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEE
Confidence 9999999999999997 6789999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=200.96 Aligned_cols=133 Identities=23% Similarity=0.347 Sum_probs=116.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHH-HHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNL-MKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~i-l~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
+.||+|+||.||+|++..+++.||+|++.+...........+..|... ++.+ +||||++++..+...+.+|++|||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 369999999999999999999999999987654444444555666554 5666 59999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~k 136 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIV 136 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence 999999997 6789999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=198.47 Aligned_cols=137 Identities=16% Similarity=0.210 Sum_probs=121.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.++|++.+.||+|+||.||+|++..+++.+|+|++..... ......+.+|+.+++.++ ||||+++++++.+....|+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCC-CCCcCeEEEEEecCCeEEE
Confidence 4789999999999999999999999999999999875432 222346778999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+. ++|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 143 (303)
T cd07869 81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELK 143 (303)
T ss_pred EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 999995 67877775 5689999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-19 Score=195.24 Aligned_cols=131 Identities=21% Similarity=0.353 Sum_probs=118.1
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|+||.||+|.++.+++.+|+|.+.+...........+..|+.+++.+ +||+|++++..+....+.|++|||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 69999999999999999999999999876554444556778899999999 59999999999999999999999999999
Q ss_pred HHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|..++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~ 137 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVR 137 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 988773 4689999999999999999999999999999999999999888764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-19 Score=193.23 Aligned_cols=140 Identities=9% Similarity=0.065 Sum_probs=122.8
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC---CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
+..++|++.+.||+|+||.||++.++ ..+..+|+|.++... .......+.+|+.++..++ ||||+++++.+...
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~ 78 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFD-HSNIVRLEGVITRG 78 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecC
Confidence 45678999999999999999999865 345689999886542 1233457889999999985 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++.|+||||+++++|.+++. ..+++..++.++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~ 147 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCK 147 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEE
Confidence 99999999999999999986 4689999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-19 Score=201.78 Aligned_cols=141 Identities=13% Similarity=0.165 Sum_probs=118.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.++..+.+||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 45578999999999999999999752 345689999986432 22234678899999999966999999999876
Q ss_pred cC-CeEEEEEecCCCCcHHHHHcC--------------------------------------------------------
Q 002560 841 DS-MHAGLLLNTYLACPLASILHT-------------------------------------------------------- 863 (908)
Q Consensus 841 ~~-~~~~iv~e~~~gg~L~~~l~~-------------------------------------------------------- 863 (908)
.. ..+|++|||+++|+|.+++..
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 54 468999999999999998851
Q ss_pred --------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 --------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 --------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~k 214 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVK 214 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEE
Confidence 266778889999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-20 Score=201.90 Aligned_cols=140 Identities=14% Similarity=0.175 Sum_probs=127.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe-E
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH-A 845 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~-~ 845 (908)
.+++|..++.+|+|+||.+++++++..++.|++|.+........ ..+...+|+.+++++ +||||+.+++.|..++. +
T Consensus 2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l 79 (426)
T KOG0589|consen 2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLL 79 (426)
T ss_pred ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceE
Confidence 36889999999999999999999999999999999987665443 344788999999998 59999999999998888 9
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+|+||+||+|.+.+. ..|+++.+..|+.|++.|++|||+++|+|||||+.||+++.++.||
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~Vk 146 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVK 146 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCcee
Confidence 99999999999999997 4699999999999999999999999999999999999999988764
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.6e-20 Score=192.89 Aligned_cols=130 Identities=18% Similarity=0.264 Sum_probs=111.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----Ce
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS-----MH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~-----~~ 844 (908)
.|.-.+++|.|+||.||.+....+++.+|||.+..+.-.. -+|..+|+.+ +||||+++..+|... -+
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKL-DHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhc-CCcCeeeEEEEEEecCCCchhH
Confidence 4777899999999999999999999999999876544222 3688999988 499999998777432 25
Q ss_pred EEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC-CccC
Q 002560 845 AGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~-g~vK 908 (908)
+.+||||++ .+|.++++ ..++.-.++.|++||++||.|||+.||+||||||.|||+|.+ |.+|
T Consensus 97 lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LK 166 (364)
T KOG0658|consen 97 LNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLK 166 (364)
T ss_pred HHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEE
Confidence 678999996 59999887 679999999999999999999999999999999999999976 6654
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-19 Score=198.66 Aligned_cols=133 Identities=22% Similarity=0.346 Sum_probs=118.3
Q ss_pred EEecCCCeEEEEEEEEC---CCCceEEEeeechhhhhc-cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 775 KCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKC-LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~~-~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
+.||+|+||.||+|+.. .+++.||+|++.+..... ......+.+|+.+++.++ ||||+++++.+..++.+|++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEe
Confidence 67999999999999874 468899999998765432 234456788999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k 140 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVK 140 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEE
Confidence 999999999997 6789999999999999999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-19 Score=193.56 Aligned_cols=139 Identities=31% Similarity=0.421 Sum_probs=128.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.+|+|++.+...........+.+|+.+++.+. ||||+++++.+.+....|++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEE
Confidence 47999999999999999999999999999999998766555556778899999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||+|.|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~k 141 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIK 141 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEE
Confidence 99999999999997 7799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-19 Score=195.60 Aligned_cols=143 Identities=11% Similarity=0.154 Sum_probs=123.5
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCce--EEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENF--LSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~--~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..+.+++|++.+.||+|+||.||+|.+..++.. +++|.+... ........+.+|+.++.++.+||||+++++.+..
T Consensus 2 ~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~ 79 (303)
T cd05088 2 PVLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 79 (303)
T ss_pred CccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC
Confidence 467889999999999999999999998877764 466665432 1223456788899999999669999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc--C----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 842 SMHAGLLLNTYLACPLASILH--T----------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~--~----------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
.+..|++|||+++++|.+++. + .+++..++.++.|++.||+|||++||+||||||+|||++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 159 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence 999999999999999999986 1 4788999999999999999999999999999999999998
Q ss_pred CCccC
Q 002560 904 SGHLQ 908 (908)
Q Consensus 904 ~g~vK 908 (908)
++.+|
T Consensus 160 ~~~~k 164 (303)
T cd05088 160 NYVAK 164 (303)
T ss_pred CCcEE
Confidence 88764
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.9e-19 Score=196.64 Aligned_cols=140 Identities=14% Similarity=0.177 Sum_probs=126.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++++..++..+|+|++.... .......+.+|+.+++.++ ||||+++++++.+.+.+
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 78 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEI 78 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEE
Confidence 45688999999999999999999999999999999987542 2234567899999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.+|.+|
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~k 144 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIK 144 (331)
T ss_pred EEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEE
Confidence 99999999999999997 6789999999999999999999986 699999999999999988764
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-19 Score=194.01 Aligned_cols=138 Identities=11% Similarity=0.168 Sum_probs=122.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|+++.+++.+|+|++...... ......+.+|+.+++.++ ||||+++++.+.....+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLK-QENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCC-CccccchhhhEecCCEEEEE
Confidence 4799999999999999999999999999999998765322 234567888999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++++.+..+.. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~k 140 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLK 140 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence 99999887766554 5799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-19 Score=211.69 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=123.3
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|++.+.||+|+||.||+|.+..+++.+|+|++............++.+|+.+++.+. ||||+++++.+.+.+..|+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyL 79 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYY 79 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEE
Confidence 468999999999999999999999999999999987654333344567899999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||++|++|.+++. ..++...+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEE
Confidence 999999999999885 1244567788999999999999999999999999999999988764
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.2e-19 Score=191.45 Aligned_cols=138 Identities=24% Similarity=0.372 Sum_probs=123.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||++.+..+++.+|+|.+.+...........+.+|+.+++.++ |++++.++..+.+.++.|++|
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEE
Confidence 3778899999999999999999999999999987765444444556788999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~ 142 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIR 142 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEE
Confidence 9999999999885 3589999999999999999999999999999999999999887653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.1e-19 Score=196.15 Aligned_cols=132 Identities=23% Similarity=0.393 Sum_probs=117.4
Q ss_pred EEecCCCeEEEEEEEE---CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 775 KCLYSTDCSEIGLVLL---RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~---~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+.||+|+||.||++++ ..+++.+|+|++.+.... ......+..|+.+++.++ ||||+++++.+.+...+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999986 357889999999875532 223456778999999995 99999999999999999999999
Q ss_pred CCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 138 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIK 138 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEE
Confidence 99999999997 6799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-19 Score=198.86 Aligned_cols=132 Identities=15% Similarity=0.156 Sum_probs=119.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCC-----CCccceeeeeeccCCe
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSP-----SACVPQILCTCADSMH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~-----~~~i~~~~~~~~~~~~ 844 (908)
.|++.+.||+|+||.|.+|++..|++.||||+++... ....+...|+.||..|++ .-|+++++++|...+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 6999999999999999999999999999999997654 345677789999999962 3489999999999999
Q ss_pred EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
+|||+|.+ +.+|+++|+ ..++...++.++.||+.||.+||+.||||+|||||||||.+-+.
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r 327 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKR 327 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCc
Confidence 99999998 679999998 56999999999999999999999999999999999999986553
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-21 Score=188.31 Aligned_cols=134 Identities=13% Similarity=0.191 Sum_probs=121.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|++.+.||+|.|+.|++|.+..+|+.||+|++....+... ..+.+.+|++|.+.|+ ||||++++.++....+.|||
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcC-CCcEeehhhhhcccceeEEE
Confidence 569999999999999999999999999999999987665443 5678899999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
+|++.|++|..-+- .-++|..+-.++.||+.||.|+|.+||||||+||+|+|+-++
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK 146 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK 146 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec
Confidence 99999999987664 568999999999999999999999999999999999999654
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.1e-19 Score=200.32 Aligned_cols=133 Identities=12% Similarity=0.149 Sum_probs=120.1
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+...+|++++.||+|+||.||+|.+..+++.+|+|.... ..+.+|+.+++.++ ||||++++++|.....
T Consensus 88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~ 157 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAIN-HPSIIQLKGTFTYNKF 157 (391)
T ss_pred ccccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCC-CCCCCCEeEEEEECCe
Confidence 3556789999999999999999999999999999996432 34678999999995 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++||++. ++|..++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 158 ~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vk 222 (391)
T PHA03212 158 TCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVC 222 (391)
T ss_pred eEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEE
Confidence 999999995 68888886 6799999999999999999999999999999999999999988764
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.2e-19 Score=190.61 Aligned_cols=131 Identities=19% Similarity=0.327 Sum_probs=117.3
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|+||.||+++++.+++.||+|.+.+...........+..|+.+++.++ ||||++++..+.+..+.|++|||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC-CCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 799999999999999999999999998765544444556677999999995 9999999999999999999999999999
Q ss_pred HHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~ 135 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCR 135 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEE
Confidence 998875 3588999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.3e-19 Score=190.49 Aligned_cols=137 Identities=25% Similarity=0.387 Sum_probs=123.2
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|+..+.||+|+||.||++.+..+++.+|+|.+.+...........+.+|+.+++.++ |++++.++..+.+.+..|++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-SQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC-CcCceeEEEEEecCCEEEEEEE
Confidence 778899999999999999999999999999987765544444556788999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~k 142 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIR 142 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEE
Confidence 999999998875 3699999999999999999999999999999999999999887664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.7e-19 Score=195.62 Aligned_cols=140 Identities=14% Similarity=0.165 Sum_probs=125.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++.+..++..+|+|++.... .......+.+|+.+++.++ ||||+++++++.+.+++
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 78 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEI 78 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCcccceeEEEEECCEE
Confidence 34578999999999999999999999999999999876542 2223457889999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. +.+++..+..++.|++.||.|||++ +|+||||||+|||++.+|.+|
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~k 144 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 144 (333)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEE
Confidence 99999999999999997 6789999999999999999999985 799999999999999988764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-19 Score=204.77 Aligned_cols=140 Identities=17% Similarity=0.158 Sum_probs=122.9
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee-cc---
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC-AD--- 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~-~~--- 841 (908)
+.-..+++.+.|.+|||+.||+|++...+..||+|++... +....+.+.+|+.+|+.|++|+|||.+++.. ..
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 4445688899999999999999999988899999987543 5667888999999999999999999999832 11
Q ss_pred ---CCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC--cEecCCCCCcEEEcCCCccC
Q 002560 842 ---SMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ---~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~g--IiHrDIKp~NILi~~~g~vK 908 (908)
.-.++|+||||.||.|-++|+ ..|++.++..|+.++++|+.+||... |||||||-|||||+.+|+.|
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~K 186 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYK 186 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEE
Confidence 134679999999999999997 56999999999999999999999998 99999999999999999765
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-19 Score=198.21 Aligned_cols=137 Identities=15% Similarity=0.193 Sum_probs=126.2
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
...|.....||+|+.|.||.+....+++.+|+|.+..... ...+-+++|+.+|+.. +|+||+++++.|-..+.+|+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~deLWV 347 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDELWV 347 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhc-cchHHHHHHHHhcccceeEE
Confidence 4557788899999999999999999999999999976653 3456789999999998 59999999999998899999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||++||+|.+.+. ..++|..+..+..+++.||.|||.+||||||||.+|||++.+|.+|
T Consensus 348 VMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vK 409 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVK 409 (550)
T ss_pred EEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEE
Confidence 999999999999998 7799999999999999999999999999999999999999999886
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-19 Score=201.56 Aligned_cols=132 Identities=16% Similarity=0.203 Sum_probs=117.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM----- 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~----- 843 (908)
--|..-+.||+|+||.||+++++.+|+.+|+|.+++.. .....+...+|+++|++++ |||||++++.-.+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~ 89 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVT 89 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCccc
Confidence 34666788999999999999999999999999988755 2335678899999999997 999999998765543
Q ss_pred -eEEEEEecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 844 -HAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 844 -~~~iv~e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
...++||||.||+|...|+ ..+++.....+...+..||.|||++||+||||||.|||+-.
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~ 155 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQI 155 (732)
T ss_pred ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEee
Confidence 4579999999999999998 56999999999999999999999999999999999999854
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-19 Score=186.53 Aligned_cols=135 Identities=13% Similarity=0.187 Sum_probs=119.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-----CCeE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-----SMHA 845 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~-----~~~~ 845 (908)
|..++.||+|+||.|+.+.++.+|+.||+|.+... +...-..++..+|+.+|+.++ |+||+.+++.+.. -+.+
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhc-CCCcceEEeeccccccccccee
Confidence 44479999999999999999999999999988643 233445678999999999996 9999999988865 3579
Q ss_pred EEEEecCCCCcHHHHHc-CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH-TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+|+|+| +.+|.+.++ +. +++..+++++.|++.||.|+|+.+|+||||||.|+|++.+..+|
T Consensus 102 YiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lK 165 (359)
T KOG0660|consen 102 YLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLK 165 (359)
T ss_pred EEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEE
Confidence 9999999 679999998 44 99999999999999999999999999999999999999887664
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-19 Score=195.86 Aligned_cols=142 Identities=17% Similarity=0.242 Sum_probs=128.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc-----cchHHHHHHHHHHHHhcC--CCCccceeeeee
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----LGKEVQVLKEKNLMKSVS--PSACVPQILCTC 839 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~-----~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~ 839 (908)
++.+|..++.||.|+||.|++|.++.....|++|.+.|..+.. ......+-.|+.||..++ .|+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 5788999999999999999999999999999999999877542 334455788999999994 389999999999
Q ss_pred ccCCeEEEEEecC-CCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 840 ADSMHAGLLLNTY-LACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 840 ~~~~~~~iv~e~~-~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++.||+||-. +|-+|++++. ..++|.+++.|++|++.|+++||+.||||||||-+|++++.+|.+|
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~k 710 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVK 710 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEE
Confidence 9999999999965 6679999998 7899999999999999999999999999999999999999999875
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.2e-19 Score=188.31 Aligned_cols=135 Identities=19% Similarity=0.281 Sum_probs=122.6
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++++.||+|+||.||++.+..+++.||+|++........ ......+|..+++.+ .||+|+++++++.+....|++||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence 7899999999999999999999999999999987654333 223345699999999 59999999999999999999999
Q ss_pred cCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 851 TYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
++.+++|.+++. +.+++..+..++.|++.||.+||++||+|+||||+|||++.+|.+
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~ 137 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEV 137 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999997 889999999999999999999999999999999999999988865
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.9e-19 Score=192.64 Aligned_cols=138 Identities=16% Similarity=0.213 Sum_probs=121.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
++++|++.+.||+|+||.||+++++.+++.+|+|.++.... ......+.+|+.+++.++ ||||+++++++...+..|
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 80 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIVHTDKSLT 80 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCC-CCCcceEEEEEeeCCeEE
Confidence 46889999999999999999999999999999999875432 223345778999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++ +|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~k 144 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELK 144 (309)
T ss_pred EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 99999975 8888876 4589999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.7e-19 Score=199.45 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=123.1
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
....+++|++++.||+|+||.||++.+..+++.||+|++.... .......+.+|+.+++.++ |+||+++++++...+
T Consensus 69 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 145 (353)
T PLN00034 69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVN-HPNVVKCHDMFDHNG 145 (353)
T ss_pred CCCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCC-CCCcceeeeEeccCC
Confidence 4456789999999999999999999999999999999986432 2233467889999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|++|||+.+++|... ...++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 146 ~~~lv~e~~~~~~L~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~k 208 (353)
T PLN00034 146 EIQVLLEFMDGGSLEGT--HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVK 208 (353)
T ss_pred eEEEEEecCCCCccccc--ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEE
Confidence 99999999999998654 3457788889999999999999999999999999999999988765
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.2e-19 Score=192.41 Aligned_cols=140 Identities=11% Similarity=0.165 Sum_probs=119.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC----------------CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD----------------SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~----------------~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~ 829 (908)
+..++|++.+.||+|+||.||+|.+.. ++..+|+|++.... .......+.+|+.++..++ |
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h 78 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLK-D 78 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcC-C
Confidence 345789999999999999999998532 33479999886532 1224557889999999995 9
Q ss_pred CccceeeeeeccCCeEEEEEecCCCCcHHHHHc-C--------------------CCCHHHHHHHHHHHHHHHHHHHhCC
Q 002560 830 ACVPQILCTCADSMHAGLLLNTYLACPLASILH-T--------------------PLDEQSARFCAASVVAALEDLHKRG 888 (908)
Q Consensus 830 ~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~-~--------------------~l~~~~~~~~~~qi~~aL~~LH~~g 888 (908)
|||+++++++.+.+..|++|||+++++|.+++. . .++...+..++.||+.||.|||++|
T Consensus 79 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 158 (304)
T cd05096 79 PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN 158 (304)
T ss_pred CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999999885 1 2566788999999999999999999
Q ss_pred cEecCCCCCcEEEcCCCccC
Q 002560 889 VLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 889 IiHrDIKp~NILi~~~g~vK 908 (908)
|+||||||+|||++.+|.+|
T Consensus 159 ivH~dlkp~Nill~~~~~~k 178 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIK 178 (304)
T ss_pred ccccCcchhheEEcCCccEE
Confidence 99999999999999988764
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.4e-19 Score=187.93 Aligned_cols=140 Identities=17% Similarity=0.222 Sum_probs=125.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|++.+.||+|+||.||++++..+++.+|+|.+.............+.+|+.+++.++ ||+++++++.+.+.+..|+
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 79 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNELNI 79 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC-CcceeeeeeeEEECCeEEE
Confidence 468999999999999999999999999999999887644444455667889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~ 146 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVK 146 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEE
Confidence 999999999998874 3489999999999999999999999999999999999999888653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=190.63 Aligned_cols=139 Identities=24% Similarity=0.370 Sum_probs=126.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.|++|.+.+...........+.+|+.+++.++ ||||+++++.+....++|++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE-NPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEecCCEEEEE
Confidence 47999999999999999999999999999999988765444445567889999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~ 141 (305)
T cd05609 80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIK 141 (305)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEE
Confidence 99999999999997 6789999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-20 Score=187.58 Aligned_cols=146 Identities=18% Similarity=0.239 Sum_probs=133.8
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceee
Q 002560 757 SIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQIL 836 (908)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~ 836 (908)
..+.+++++..-+-|.++.+||+|+||.||++.++.+|+.+|+|.+.... ..+.+..|+.||+++ ++|+++++|
T Consensus 21 KLd~~sL~K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQEIIKEISIMQQC-~S~yVVKYY 94 (502)
T KOG0574|consen 21 KLDSSALNKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQEIIKEISIMQQC-KSKYVVKYY 94 (502)
T ss_pred ccChhhhcCChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHHHHHHHHHHHHc-CCchhhhhh
Confidence 35566777777788999999999999999999999999999999876543 567899999999998 599999999
Q ss_pred eeeccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 837 CTCADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 837 ~~~~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.|-....+|||||||-.|++.++++ +++++.++..++...+.||+|||...-||||||..|||++.+|+.|
T Consensus 95 GSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AK 169 (502)
T KOG0574|consen 95 GSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAK 169 (502)
T ss_pred hhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhh
Confidence 99999999999999999999999997 7899999999999999999999999999999999999999999876
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=194.46 Aligned_cols=136 Identities=11% Similarity=0.205 Sum_probs=118.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----Ce
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS-----MH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~-----~~ 844 (908)
.|++.+.||+|+||.||++.+..++..||+|.+.... ........+.+|+.+++.++ ||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCce
Confidence 4899999999999999999999999999999886432 22233456889999999995 99999999876432 35
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+. ++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k 143 (338)
T cd07859 79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLK 143 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEE
Confidence 899999994 68999887 6799999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.8e-19 Score=199.09 Aligned_cols=141 Identities=11% Similarity=0.144 Sum_probs=121.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||+|.+..+ +..||+|++..... ......+.+|+.+++.+..|+||+++++.+.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 4567899999999999999999986443 35799999875432 2235678899999999856999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHcC---------------------------------------------------------
Q 002560 841 DSMHAGLLLNTYLACPLASILHT--------------------------------------------------------- 863 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~~--------------------------------------------------------- 863 (908)
....+|++|||+++|+|.+++..
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 99999999999999999998741
Q ss_pred ---------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 ---------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 ---------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++++..+..++.||+.||.|||++||+||||||+|||+++++.+|
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~k 252 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAK 252 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEE
Confidence 367788999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.3e-19 Score=199.58 Aligned_cols=141 Identities=11% Similarity=0.139 Sum_probs=120.9
Q ss_pred ccccceEEEEEecCCCeEEEEEEEE-----CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLL-----RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~-----~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||+|++ ..++..+|+|+++.... ......+.+|+.++..+.+||||+++++.+.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 4566899999999999999999974 34567899999864332 2234578899999999966999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc-C--------------------------------------------------------
Q 002560 841 DSMHAGLLLNTYLACPLASILH-T-------------------------------------------------------- 863 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~-~-------------------------------------------------------- 863 (908)
+....|+||||+++|+|.+++. .
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 9999999999999999999885 1
Q ss_pred --------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 --------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 --------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~k 254 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITK 254 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEE
Confidence 367788899999999999999999999999999999999877653
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-18 Score=193.83 Aligned_cols=133 Identities=11% Similarity=0.161 Sum_probs=118.2
Q ss_pred EEEEecCC--CeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 773 WRKCLYST--DCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 773 ~~~~LG~G--~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
++++||+| +|+.||++.++.+++.||+|.+...... ......+.+|+.+++.++ ||||+++++++..++..|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEECCEEEEEEe
Confidence 46789999 7899999999999999999998765432 234556788999999985 9999999999999999999999
Q ss_pred cCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 851 TYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
|+++++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~ 140 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKV 140 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcE
Confidence 999999999985 458999999999999999999999999999999999999988765
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-18 Score=186.21 Aligned_cols=138 Identities=24% Similarity=0.431 Sum_probs=127.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||+|.+..+++.+|+|++.+...........+.+|+.++++++ ||||++++..+.+....|++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCeEEEEE
Confidence 5899999999999999999999999999999998766555456778999999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+.|++|..++. ..+++..+..++.|++.||.|||++|++|+||||+||++++++.+|
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~ 140 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVH 140 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEE
Confidence 9999999999997 4799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=194.84 Aligned_cols=139 Identities=16% Similarity=0.215 Sum_probs=120.6
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC---
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM--- 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~--- 843 (908)
-+++|++.+.||+|+||.||++.+..+++.+|+|++.+.. ........+.+|+.+++.++ ||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCcc
Confidence 4688999999999999999999999999999999987543 22334567789999999995 999999999886543
Q ss_pred ---eEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 ---HAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ---~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|++|||+.+ +|.+.+...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~k 163 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 163 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence 57999999964 67777777789999999999999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-18 Score=184.22 Aligned_cols=139 Identities=16% Similarity=0.223 Sum_probs=125.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.+|+|.++............+.+|+.+++.++ |++++++++.+.+.+..|++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCeeeeeeeeecCCeEEEE
Confidence 68999999999999999999999999999999987655444455678899999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++. ..+++..+..++.+++.||.|||++||+||||||+||+++.+|.+|
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~ 146 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVK 146 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEE
Confidence 99999999999884 3489999999999999999999999999999999999999888764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=189.90 Aligned_cols=139 Identities=27% Similarity=0.422 Sum_probs=126.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.+|+|.+.+...........+..|+.++..+. ||+|+++++.+.+....|++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEE
Confidence 47999999999999999999999999999999998765544445667899999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+.+++|.+++. ..+++..+..++.|++.||.|||++|++|+||||+|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~ 143 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIM 143 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEE
Confidence 99999999999986 4689999999999999999999999999999999999999888653
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-18 Score=188.65 Aligned_cols=137 Identities=15% Similarity=0.184 Sum_probs=123.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+.+++.++ ||||+++++.+.+.+++|++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECN-SPYIVGFYGAFYSDGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCEEEEE
Confidence 47999999999999999999999999999999876432 1223456889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..+..++.|++.||.|||+ ++|+||||||+|||++.+|.+|
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~ 140 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIK 140 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEE
Confidence 99999999999997 678999999999999999999997 5999999999999999988664
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=200.38 Aligned_cols=138 Identities=10% Similarity=0.054 Sum_probs=121.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC-CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS-ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~-~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
....|.+.+.||+|+||.||++....+ +..+|+|.+... .......+.+|+.+++.++ ||||+++++.+...+++
T Consensus 65 ~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~ 140 (478)
T PTZ00267 65 REHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACD-HFGIVKHFDDFKSDDKL 140 (478)
T ss_pred cceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEECCEE
Confidence 344599999999999999999998877 778898876432 2334456788999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||||++||+|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~k 209 (478)
T PTZ00267 141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIK 209 (478)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEE
Confidence 99999999999998774 3589999999999999999999999999999999999999998765
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-18 Score=196.16 Aligned_cols=136 Identities=17% Similarity=0.180 Sum_probs=119.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-----e
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM-----H 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~-----~ 844 (908)
+|++.+.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.++ ||||+++++.+.... .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccce
Confidence 5888999999999999999999999999999886432 22234467889999999995 999999999988776 8
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+. ++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~k 143 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLK 143 (372)
T ss_pred EEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEE
Confidence 999999996 57888776 6799999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-18 Score=187.86 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=122.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
++++|++.+.||.|+||.||++.+..+++.+|+|.+..... ......+.+|+.+++.++ ||||+++++.+.+....|
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~ 80 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLT 80 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcC-CCCcceEEEEEecCCeEE
Confidence 57889999999999999999999999999999999865432 223345778999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+. ++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 81 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~k 144 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELK 144 (301)
T ss_pred EEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEE
Confidence 9999996 58888876 5689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-18 Score=184.76 Aligned_cols=139 Identities=14% Similarity=0.158 Sum_probs=124.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
....+|++.+.||+|+||.||++.+..+++.+|+|++.... ......+.+|+.+++.++ ||+|+++++.+......
T Consensus 6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~~ 81 (267)
T cd06646 6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECK-HCNIVAYFGSYLSREKL 81 (267)
T ss_pred CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEE
Confidence 34678999999999999999999999999999999986432 123456788999999985 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 82 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~ 146 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVK 146 (267)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEE
Confidence 99999999999999886 6789999999999999999999999999999999999999888664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-18 Score=191.86 Aligned_cols=135 Identities=19% Similarity=0.251 Sum_probs=118.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-eEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM-HAGL 847 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~-~~~i 847 (908)
++|.--..||+|+||.||++..... ..+|||.+....... ...|.+|+.++.+++ |||+++++++|.+.+ ..++
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG---EREFLNEVEILSRLR-HPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcc---hhHHHHHHHHHhcCC-CcCcccEEEEEecCCceEEE
Confidence 6777778999999999999987644 899999776543211 445999999999996 999999999999888 5999
Q ss_pred EEecCCCCcHHHHHc---C-CCCHHHHHHHHHHHHHHHHHHHhCC---cEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---T-PLDEQSARFCAASVVAALEDLHKRG---VLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~-~l~~~~~~~~~~qi~~aL~~LH~~g---IiHrDIKp~NILi~~~g~vK 908 (908)
|+||+++|+|.++|. . .+++.....|+.+++.||+|||... ||||||||+|||+|++.+.|
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999999999999998 3 7899999999999999999999854 99999999999999988765
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-18 Score=186.59 Aligned_cols=140 Identities=17% Similarity=0.218 Sum_probs=125.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|++.+.||+|+||.||++.+..+++.+|+|.+.+...........+.+|+.+++.+. ||||+++++.+...+..|+
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~ 79 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNI 79 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc-CCchhhhhheeEeCCeEEE
Confidence 467999999999999999999999999999999887655444445567889999999994 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~ 146 (267)
T cd08229 80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVK 146 (267)
T ss_pred EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEE
Confidence 999999999999875 4589999999999999999999999999999999999999888764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.4e-18 Score=182.45 Aligned_cols=136 Identities=15% Similarity=0.195 Sum_probs=120.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+.++|++.+.||+|+||.||++.++ .+..+|+|.+..... ....+.+|+.+++.++ ||+|+++++++.+....|
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 75 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKPLY 75 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCC-CCCceeEEEEEccCCCEE
Confidence 4678999999999999999999875 456799998764332 2356788999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 76 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~k 140 (256)
T cd05114 76 IVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVK 140 (256)
T ss_pred EEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEE
Confidence 9999999999999986 4589999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-18 Score=195.72 Aligned_cols=140 Identities=13% Similarity=0.127 Sum_probs=120.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..++|++.+.||+|+||.||+|.+... +..+|+|++.... .....+.+.+|+.+++.+..||||+++++++.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 467899999999999999999987533 3479999986542 223456789999999999669999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHcC----------------------------------------------------------
Q 002560 842 SMHAGLLLNTYLACPLASILHT---------------------------------------------------------- 863 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~~---------------------------------------------------------- 863 (908)
....|||||||++|+|.+++..
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 9999999999999999988751
Q ss_pred ----------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 864 ----------------------------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 864 ----------------------------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
.+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC
Confidence 2667778899999999999999999999999999999998
Q ss_pred CCccC
Q 002560 904 SGHLQ 908 (908)
Q Consensus 904 ~g~vK 908 (908)
++.+|
T Consensus 273 ~~~~k 277 (400)
T cd05105 273 GKIVK 277 (400)
T ss_pred CCEEE
Confidence 87654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=5e-19 Score=194.11 Aligned_cols=150 Identities=11% Similarity=0.122 Sum_probs=132.2
Q ss_pred CCCccccccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCcc
Q 002560 753 KPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACV 832 (908)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i 832 (908)
++....+....-.+..+++.+...||+|.||+||++++.. .||||++........ +.+.|.+|+.++++-+ |.||
T Consensus 376 ~~r~~s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTR-H~NI 450 (678)
T KOG0193|consen 376 KNRQASDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTR-HENI 450 (678)
T ss_pred ccccCCccccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHH-HHHHHHHHHHHHhhcc-hhhh
Confidence 3444445556667888999999999999999999999865 499999987665444 8889999999999975 9999
Q ss_pred ceeeeeeccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 833 PQILCTCADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 833 ~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+-+++++..... .||+.+|+|.+|+.+|+ .+|.....+.|+.||++|+.|||.++|||||||..||++.+++.||
T Consensus 451 lLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVk 528 (678)
T KOG0193|consen 451 LLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVK 528 (678)
T ss_pred eeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEE
Confidence 999999988776 99999999999999998 6799999999999999999999999999999999999999988775
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.3e-18 Score=180.81 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=121.7
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||++.+..+++.+|+|.++.... ....+.+.+|..+++.++ |||++++++.+.+.+++|++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMK-HPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEE
Confidence 58999999999999999999999999999998864332 224567788999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||+++++.++
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~ 140 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVK 140 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEE
Confidence 9999999999885 4589999999999999999999999999999999999999887653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-18 Score=171.77 Aligned_cols=139 Identities=19% Similarity=0.187 Sum_probs=122.7
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc---
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--- 841 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--- 841 (908)
.++-+.|++.+.||+|+|+.||+|+...+++.||+|++.... .+..+..++|++..++++ |||++++++....
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFN-SPNVLRLVDHQLREEK 92 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhc
Confidence 455677999999999999999999999999999999886554 345778999999999996 8999999876533
Q ss_pred --CCeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCC--cEecCCCCCcEEEcCCCcc
Q 002560 842 --SMHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 842 --~~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~g--IiHrDIKp~NILi~~~g~v 907 (908)
....|++++|+..|+|.+.++ ..+++..+..|+.+++.||++||+.. ++||||||.|||+.++|..
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~ 168 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLP 168 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCce
Confidence 345999999999999999986 36999999999999999999999999 9999999999999987754
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-18 Score=183.90 Aligned_cols=139 Identities=9% Similarity=0.081 Sum_probs=121.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCc---eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
...+|++.+.||+|+||.||++.++.++. .+|+|.++.... ......+.+|+.+++.+. ||||+++++.+...+
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 78 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSK 78 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCC
Confidence 45789999999999999999998865443 799998865331 224567889999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||+++++|.+++. +.++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~ 146 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCK 146 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEE
Confidence 9999999999999999997 4689999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-18 Score=185.36 Aligned_cols=131 Identities=14% Similarity=0.215 Sum_probs=117.4
Q ss_pred eEEE--EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 771 MEWR--KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 771 ~~~~--~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
|++. +.||+|.||.||-+.++++|+.+|+|++.|-.+... +...+.+|+.||+.+ +||.|+.+...|+..+.+|+|
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l-~HPGiV~le~M~ET~ervFVV 641 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNL-HHPGIVNLECMFETPERVFVV 641 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhc-CCCCeeEEEEeecCCceEEEE
Confidence 5553 789999999999999999999999999998776543 568899999999999 599999999999999999999
Q ss_pred EecCCCCcHHHHH-c---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 849 LNTYLACPLASIL-H---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 849 ~e~~~gg~L~~~l-~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
||-+.| ++.+++ . +++++...++++.||+.||.|||-++|+|.||||||||+.+.
T Consensus 642 MEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~ 700 (888)
T KOG4236|consen 642 MEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA 700 (888)
T ss_pred ehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC
Confidence 999965 555544 4 889999999999999999999999999999999999999753
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-18 Score=185.75 Aligned_cols=138 Identities=17% Similarity=0.210 Sum_probs=122.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.+++|++.+.||+|+||.||++.++.+++.||+|.+..... ......+.+|+.+++.++ ||+|+++++++.+..+.|
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 79 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLK-HANIVTLHDIIHTKKTLT 79 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCC-CcceeeEEEEEecCCeEE
Confidence 46889999999999999999999998999999999865432 122345678999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||||+.+ +|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~k 143 (291)
T cd07844 80 LVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELK 143 (291)
T ss_pred EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEE
Confidence 99999975 8999886 4689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.9e-18 Score=182.34 Aligned_cols=139 Identities=9% Similarity=0.072 Sum_probs=122.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC---CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS---ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~---~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
..++|++.+.||+|+||.||++.++.+ ...+|+|.++... .......+.+|+.+++.++ ||+|+++++.+....
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 78 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFD-HPNIIRLEGVVTKSR 78 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCcceEeEEEecCC
Confidence 467899999999999999999988654 4589999876543 2234456888999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~ 146 (266)
T cd05033 79 PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCK 146 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEE
Confidence 9999999999999999986 4689999999999999999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.3e-18 Score=182.34 Aligned_cols=139 Identities=16% Similarity=0.157 Sum_probs=124.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc--cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC--LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
++|++.+.||+|++|.||.+.+..+++.+|+|.+....... ......+.+|+.+++.++ ||+|+++++.+.+...+|
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEccCCeEE
Confidence 57999999999999999999999999999999986543221 223457888999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. +.+++..++.++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~ 144 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVK 144 (263)
T ss_pred EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 9999999999999987 6789999999999999999999999999999999999999988764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-18 Score=188.36 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=120.0
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
-+...+|++.+.||+|+||.||++.+..++. .+|+|++.... .......+.+|+.+++.+. ||||+++++.+.
T Consensus 3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~g~~~ 79 (316)
T cd05108 3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVD-NPHVCRLLGICL 79 (316)
T ss_pred ccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEc
Confidence 4567889999999999999999999876655 48999876432 2234557889999999995 999999999887
Q ss_pred cCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.. ..+++++|+++|+|.+++. ..++...+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~k 149 (316)
T cd05108 80 TS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVK 149 (316)
T ss_pred CC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEE
Confidence 64 5789999999999999997 3588999999999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.3e-18 Score=182.41 Aligned_cols=139 Identities=10% Similarity=0.100 Sum_probs=122.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCc---eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
.+++|++.+.||+|+||.||++.++.+++ .+|+|++.... .......+..|+.+++.+. ||||+++++.+.+..
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~ 78 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSR 78 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CcCcceEEEEECCCC
Confidence 46789999999999999999999877665 69999986532 2334567899999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||+++++|.+++. +.++...++.++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~k 146 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCK 146 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEE
Confidence 9999999999999999987 5589999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-18 Score=198.91 Aligned_cols=140 Identities=12% Similarity=0.087 Sum_probs=121.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC---
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM--- 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~--- 843 (908)
.-++|++.+.||+|+||.||++++..+++.||+|++...... ......+.+|+.++..+. |+++++++..+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCC-CCcEEEeecceecccccC
Confidence 457899999999999999999999999999999998765432 234566788999999985 999999887664322
Q ss_pred -----eEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 -----HAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 -----~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+++||||+++|+|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence 4789999999999999885 3689999999999999999999999999999999999999988765
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-18 Score=181.92 Aligned_cols=131 Identities=12% Similarity=0.166 Sum_probs=116.9
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++.++.+++.+|+|.+.... .......+.+|+.+++.++ ||||+++++.+......|+||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCCCeEEEEeeccC
Confidence 36899999999999999999999999875432 2234567889999999995 99999999999999999999999999
Q ss_pred CcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~k 134 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLK 134 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEE
Confidence 99999986 3589999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.4e-18 Score=181.75 Aligned_cols=138 Identities=15% Similarity=0.198 Sum_probs=124.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+...+|.+.+.||+|+||.||++.+..+++.+|+|.+.... .....+.+|+.+++.++ ||+|+++++.+.....+
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 77 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPF 77 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCC-CCChhheEEEEcCCCCc
Confidence 45678999999999999999999999999999999886432 23456888999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||+++++.+|
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~k 144 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 144 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEE
Confidence 99999999999999986 3589999999999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.5e-18 Score=184.46 Aligned_cols=138 Identities=15% Similarity=0.236 Sum_probs=114.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECC-CCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeec-----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRD-SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCA----- 840 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~-~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~----- 840 (908)
++|++.+.||+|+||.||+|++.. +++.+|+|.+...... ........+|..+++.+. .||||+++++.+.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 469999999999999999999864 4678999988654322 223345667888877763 4999999998874
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....+|++|||+. ++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~k 150 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 150 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEE
Confidence 3457999999996 68998886 4589999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.3e-18 Score=182.98 Aligned_cols=140 Identities=14% Similarity=0.202 Sum_probs=121.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++++.||+|+||.||+++.+.+ .+.+++|.+.... .......+.+|+.+++.+. ||+|+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~ 78 (275)
T cd05046 2 FPRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLS-HKNVVRLLGLCR 78 (275)
T ss_pred CChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcC-CcceeeeEEEEC
Confidence 3457899999999999999999997643 4578999875432 1123567889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc--C---------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH--T---------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~--~---------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+....|++|||+++++|.+++. . .+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~ 157 (275)
T cd05046 79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVK 157 (275)
T ss_pred CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEE
Confidence 9999999999999999999997 3 589999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-18 Score=186.70 Aligned_cols=135 Identities=19% Similarity=0.174 Sum_probs=123.5
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|.+.+.||+|.|..|-++++.-||..||+|++.|..+... ...+++.|++.|+.+ +||||+++|.+......+|+|+|
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLV-QHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLV-QHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHh-cCcCeeeeeehhcccceEEEEEE
Confidence 7888999999999999999999999999999999876543 456899999999998 59999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCcc
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~v 907 (908)
+-.+|+|+++|- ..+.+..++.|++||+.|+.|+|...++||||||+|+.+-+ -|.+
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlV 158 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLV 158 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCce
Confidence 999999999986 77999999999999999999999999999999999998864 3444
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.2e-18 Score=184.00 Aligned_cols=140 Identities=14% Similarity=0.163 Sum_probs=121.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+++++|++.+.||+|+||.||++.+. .++..+++|.+.... .......+.+|..+++.+. ||||+++++.+..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 78 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELH-HPNIVCLLGVVTQ 78 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEec
Confidence 56789999999999999999999853 355789999886432 2223457888999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc-------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 842 SMHAGLLLNTYLACPLASILH-------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~-------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
....|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 999999999999999999984 1367888999999999999999999999999999999999
Q ss_pred CCCccC
Q 002560 903 KSGHLQ 908 (908)
Q Consensus 903 ~~g~vK 908 (908)
.++.+|
T Consensus 159 ~~~~~k 164 (283)
T cd05090 159 EQLHVK 164 (283)
T ss_pred CCCcEE
Confidence 887664
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-18 Score=191.29 Aligned_cols=139 Identities=16% Similarity=0.211 Sum_probs=120.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS---- 842 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~---- 842 (908)
-+++|++.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||||+++++.+...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhC-CCchhceeeeeecccccc
Confidence 46789999999999999999999999999999999865432 2234567788999999985 99999999987543
Q ss_pred --CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 --MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 --~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+.+ +|.+.+...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~k 159 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 159 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEE
Confidence 357999999964 77777777799999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.2e-18 Score=182.93 Aligned_cols=136 Identities=14% Similarity=0.163 Sum_probs=120.8
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++ ||+++++++.+.++...|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEE
Confidence 58999999999999999999999999999999865432 2233456788999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||++ ++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~ 141 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIK 141 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEE
Confidence 9997 58888875 4589999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-18 Score=191.05 Aligned_cols=138 Identities=15% Similarity=0.198 Sum_probs=120.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
.+.|++++.||+|+||.||+|.+..+++.||+|.+.+... .......+.+|+.+++.++ ||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMK-HENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcC-CCchhhhhhhhcccccccc
Confidence 4679999999999999999999999999999999875432 2223456778999999995 99999999877543
Q ss_pred -CeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 -MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 -~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|+++ +++|..++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~k 158 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELR 158 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEE
Confidence 4579999988 789999887 7899999999999999999999999999999999999999988765
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.8e-18 Score=183.64 Aligned_cols=140 Identities=24% Similarity=0.344 Sum_probs=128.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|+||.||++.+..+++.+|+|++.+...........+..|..+++.+..||||+++++.+.+.+..|++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999998766555555677889999999995599999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||++++++|.+++. +.+++..+..++.|++.||.|||++|++|+||||+||+++.+|.+|
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~ 142 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIK 142 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEE
Confidence 99999999999998 5799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-18 Score=190.65 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=122.9
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCc---e-EEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSEN---F-LSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~-~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
-++..+.++||+|+||.||++..+..+. . ||+|...........+...+++|.++|++++ ||||+++|++.....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEE 234 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCC
Confidence 3455666999999999999998865422 3 8999887544445567889999999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+|||+|+||+|.++|+ +.++..+...++.+.+.||+|||++++|||||-..|+|++.++.+|
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEE
Confidence 9999999999999999998 3599999999999999999999999999999999999999987754
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.9e-18 Score=182.62 Aligned_cols=137 Identities=12% Similarity=0.215 Sum_probs=118.3
Q ss_pred ccceEEEEEecCCCeEEEEEEEE----CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec--c
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLL----RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA--D 841 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~--~ 841 (908)
-++|++.+.||+|+||.||++.. ..++..+|+|.+.... ......+.+|+.+++.++ ||||+++++.+. +
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~ 78 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAG 78 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCC-CCCeeEEEEEEccCC
Confidence 35799999999999999999974 4568899999976432 234567889999999995 999999988754 3
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~ 148 (284)
T cd05081 79 RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVK 148 (284)
T ss_pred CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEE
Confidence 457899999999999999986 4589999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.6e-18 Score=190.66 Aligned_cols=141 Identities=11% Similarity=0.111 Sum_probs=118.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
++.++|++.+.||+|+||.||+|.+. .+++.||+|+++.... ......+.+|+.++..+.+||||+++++.+.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 34578999999999999999999853 4577999999865331 2234578899999999977999999998775
Q ss_pred c-CCeEEEEEecCCCCcHHHHHc-C-------------------------------------------------------
Q 002560 841 D-SMHAGLLLNTYLACPLASILH-T------------------------------------------------------- 863 (908)
Q Consensus 841 ~-~~~~~iv~e~~~gg~L~~~l~-~------------------------------------------------------- 863 (908)
. ...+|++|||+++|+|.+++. .
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 457899999999999999885 1
Q ss_pred -------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 -------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 -------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~k 219 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVK 219 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEE
Confidence 256777888999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.1e-18 Score=182.55 Aligned_cols=135 Identities=14% Similarity=0.161 Sum_probs=120.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.+|+|++.+.. .......+.+|+.+++.++ ||+|+++++.+...+..+++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 77 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCD-SPYIIGFYGAFFVENRISIC 77 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEECCEEEEE
Confidence 47899999999999999999999999999999986542 1223457889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..+ ..+++..+..++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 78 ~e~~~~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~ 135 (279)
T cd06619 78 TEFMDGGSLDVY--RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVK 135 (279)
T ss_pred EecCCCCChHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEE
Confidence 999999998655 4678999999999999999999999999999999999999988764
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.3e-18 Score=183.78 Aligned_cols=137 Identities=14% Similarity=0.159 Sum_probs=124.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
..+|++.+.||.|+||.||++.+..+++.+|+|.+..... ...+.+.+|..+++.+ +||+++++++.+....+.|+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEEE
Confidence 3789999999999999999999999999999999865432 2345678899999998 59999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 94 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~ 155 (297)
T cd06656 94 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVK 155 (297)
T ss_pred eecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 999999999999997 7789999999999999999999999999999999999999888764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.9e-18 Score=183.23 Aligned_cols=139 Identities=22% Similarity=0.335 Sum_probs=123.6
Q ss_pred ceEEEEEecCCCeEEEEEEEEC---CCCceEEEeeechhhhh-ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVK-CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+|++.+.||.|+||.||+|.+. .+++.||+|++...... .....+++.+|+.++..+.+|++|++++..+......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 5889999999999999999875 47889999998765432 2334567888999999997799999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.+|.+|
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~k 145 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV 145 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEE
Confidence 99999999999999987 6789999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-17 Score=178.13 Aligned_cols=137 Identities=15% Similarity=0.222 Sum_probs=123.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|.+.+.||+|+||.||++.+..+++.+++|.+...... ......+.+|+.+++.++ |||++++++.+.+.+..|++|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcC-CCCeehheeeeccCCEEEEEE
Confidence 588999999999999999999999999999998764433 334567889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+|
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~ 141 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVK 141 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEE
Confidence 9999999999986 4688999999999999999999999999999999999999888654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-18 Score=181.91 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=120.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+..+|++.+.||+|+||.||++.++ ++..+|+|++.+... ....+.+|+.+++.+. ||+|+++++.+......|
T Consensus 2 ~~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05059 2 DPSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRPIF 75 (256)
T ss_pred ChHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCceE
Confidence 4567999999999999999999886 466899998764332 2346778999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~k 140 (256)
T cd05059 76 IVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVK 140 (256)
T ss_pred EEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEE
Confidence 9999999999999986 4689999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.6e-18 Score=183.58 Aligned_cols=137 Identities=16% Similarity=0.228 Sum_probs=115.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeecc-----C
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCAD-----S 842 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~-----~ 842 (908)
.|++.+.||+|+||.||+|+++.+++.+|+|.++..... ......+.+|+.+++.+. .||||+++++++.+ .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 489999999999999999999999999999998754322 222334567777777663 49999999988754 3
Q ss_pred CeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..++++|||+. ++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~k 148 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVK 148 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 56899999997 48888886 3489999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-17 Score=181.85 Aligned_cols=138 Identities=13% Similarity=0.154 Sum_probs=122.7
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.++.+++.+|+|++..... .......+.+|+.+++.++ |||++++++.+......|++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEE
Confidence 469999999999999999999999999999998865432 1223346788999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++++.|..++. ..+++..++.++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~ 140 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIK 140 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEE
Confidence 99999998888876 5799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-17 Score=177.93 Aligned_cols=137 Identities=13% Similarity=0.173 Sum_probs=124.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.++|++.+.||.|+||.||++.+..+++.+++|++..... .....+.+|+.+++.++ ||+|+++++.+.+...+|+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 77 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECR-HPNIVAYFGSYLRRDKLWI 77 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCC-CCChhceEEEEEeCCEEEE
Confidence 3689999999999999999999998999999999875432 24567889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 78 ~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~ 141 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVK 141 (262)
T ss_pred EEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEE
Confidence 999999999999986 5799999999999999999999999999999999999999988764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.3e-18 Score=179.57 Aligned_cols=136 Identities=13% Similarity=0.169 Sum_probs=120.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+.++|++.+.||+|+||.||++.+.. +..+|+|.+..... ....+.+|+.+++.+. ||+|+++++++......|
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 75 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRPIY 75 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCC-CCCeeeEEEEEccCCCcE
Confidence 56789999999999999999998754 44699998764432 2356889999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+.+++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.+|
T Consensus 76 lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~k 140 (256)
T cd05113 76 IVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVK 140 (256)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEE
Confidence 9999999999999986 4689999999999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.7e-18 Score=184.05 Aligned_cols=139 Identities=9% Similarity=0.136 Sum_probs=119.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+++|++.+.||+|+||.||++....++. .+++|.++... .....+.+.+|+.++.++.+||+|+++++.+......
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 3689999999999999999999877765 46888765321 2223456888999999996699999999999999999
Q ss_pred EEEEecCCCCcHHHHHc-C-----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 846 GLLLNTYLACPLASILH-T-----------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-~-----------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
|++|||+++++|.+++. . .+++..++.++.|++.||+|||++||+||||||+|||++.++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeE
Confidence 99999999999999986 1 37888999999999999999999999999999999999988765
Q ss_pred C
Q 002560 908 Q 908 (908)
Q Consensus 908 K 908 (908)
|
T Consensus 159 k 159 (297)
T cd05089 159 K 159 (297)
T ss_pred E
Confidence 4
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.2e-18 Score=183.91 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=123.8
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|++.+.||+|+||.||++++..+++.+|+|.++... ......+.+|+.+++.++ ||+|+++++.+...+..|
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~~~ 82 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCK-HSNIVAYFGSYLRRDKLW 82 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEE
Confidence 3468999999999999999999999999999999986543 123345778999999984 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~ 146 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVK 146 (267)
T ss_pred EEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 9999999999999987 7799999999999999999999999999999999999999888654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=179.32 Aligned_cols=139 Identities=15% Similarity=0.159 Sum_probs=121.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCe
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~ 844 (908)
++|++.+.||+|+||.||++.+..+++.+|+|.+...... .......+.+|+.+++.+ +||+|+++++.+.+ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence 6899999999999999999999999999999987543211 123456788899999999 49999999998876 357
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~ 146 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVK 146 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEE
Confidence 899999999999999986 6689999999999999999999999999999999999999888654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=8e-18 Score=189.53 Aligned_cols=139 Identities=15% Similarity=0.208 Sum_probs=120.2
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS---- 842 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~---- 842 (908)
-+++|++.+.||+|+||.||++.+..+++.+|+|++.+.. ........+.+|+.+++.++ ||||+++++.+...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcC-CCCccccceeeccccccc
Confidence 3678999999999999999999999999999999987543 22334567788999999985 99999999877543
Q ss_pred --CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 --MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 --~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+|+||||+. ++|..++...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k 166 (364)
T cd07875 100 EFQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166 (364)
T ss_pred ccCeEEEEEeCCC-CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEE
Confidence 45799999996 478887777789999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.1e-18 Score=184.42 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=123.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
-++|++.+.||.|+||.||++.+..++..+|+|.+.... ......+..|+.+++.++ ||+|+++++.+.+....|+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEE
Confidence 356999999999999999999998899999999986432 234567888999999996 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|..++. ..+++..++.++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~ 143 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVK 143 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEE
Confidence 999999999999986 5699999999999999999999999999999999999999887654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.1e-18 Score=184.83 Aligned_cols=141 Identities=13% Similarity=0.146 Sum_probs=121.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-------CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeee
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-------SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-------~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~ 838 (908)
+..++|.+.+.||+|+||.||++.+.. +...+|+|.+.... .......+..|+.+++.+..||+|+++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 345789999999999999999998643 23479999887542 223345688899999999669999999999
Q ss_pred eccCCeEEEEEecCCCCcHHHHHc-C-----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEE
Q 002560 839 CADSMHAGLLLNTYLACPLASILH-T-----------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900 (908)
Q Consensus 839 ~~~~~~~~iv~e~~~gg~L~~~l~-~-----------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NIL 900 (908)
+...+..|++|||+++++|.+++. . .++...+..++.|++.||+|||++|++||||||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 172 (307)
T cd05098 93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 172 (307)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence 999999999999999999999996 1 3788899999999999999999999999999999999
Q ss_pred EcCCCccC
Q 002560 901 LDKSGHLQ 908 (908)
Q Consensus 901 i~~~g~vK 908 (908)
++.++.+|
T Consensus 173 l~~~~~~k 180 (307)
T cd05098 173 VTEDNVMK 180 (307)
T ss_pred EcCCCcEE
Confidence 99888764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.3e-18 Score=182.02 Aligned_cols=133 Identities=21% Similarity=0.322 Sum_probs=112.7
Q ss_pred EecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhc--CCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV--SPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l--~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+..+++.+|+|.+.+.............+|..++..+ .+||+++.++..+...+..|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998765543332333344555444443 358999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|..++. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~ 137 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 137 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEE
Confidence 999999886 6799999999999999999999999999999999999999888654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.2e-18 Score=183.48 Aligned_cols=137 Identities=17% Similarity=0.228 Sum_probs=122.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+|++.+.||+|+||.||++.+..+++.+|+|.+...... .......+..|+.+++.++ |++|+++++++.+.+..|+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 488899999999999999999999999999998765533 1223456778999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--C-CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--T-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~-~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+ +++|.+++. . .+++..+..++.||+.||.|||++||+|+||||+|||++.+|.+|
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~ 142 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLK 142 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEE
Confidence 99999 899999997 3 699999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=9e-18 Score=181.51 Aligned_cols=131 Identities=23% Similarity=0.365 Sum_probs=118.2
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|+||.||+|.+..+++.+|+|.+.+...........+..|+.+++.++ ||+|+++++.+...+..|++|||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 689999999999999999999999987765444445566788999999995 9999999999999999999999999999
Q ss_pred HHHHHc--C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. . .+++..+..++.|++.||.|||++|++||||+|+||+++.++.+|
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~ 135 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVR 135 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence 999986 3 699999999999999999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.7e-18 Score=179.45 Aligned_cols=137 Identities=11% Similarity=0.126 Sum_probs=121.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++++.||+|+||.||++... .+..+|+|.+..... ..+.+.+|+.+++.++ |++|+++++.+.+....
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPI 76 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch----hHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCc
Confidence 56789999999999999999999865 556799998764322 3457889999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..++......++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~ 143 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCK 143 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEE
Confidence 99999999999999986 4578889999999999999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=182.12 Aligned_cols=137 Identities=14% Similarity=0.162 Sum_probs=123.9
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
..+|++.+.||.|+||.||++.+..+++.+++|.+..... .....+.+|+.+++.+. |||++++++.+....+.|+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~~~l 94 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDELWV 94 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCEEEE
Confidence 3689999999999999999999999999999998875442 23466889999999984 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 95 v~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~k 156 (296)
T cd06654 95 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVK 156 (296)
T ss_pred eecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEE
Confidence 999999999999998 6789999999999999999999999999999999999999888654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=200.71 Aligned_cols=136 Identities=19% Similarity=0.226 Sum_probs=119.7
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SM 843 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~ 843 (908)
..+++|++++.||.|+||.||+|++..++..+|+|++...... ......+..|+.+++.+. ||+|++++++|.+ ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecCCC
Confidence 4578999999999999999999999999999999998755432 234567889999999995 9999999998844 46
Q ss_pred eEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC-------CcEecCCCCCcEEEcC
Q 002560 844 HAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKR-------GVLYRGVSPDVLMLDK 903 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~-------gIiHrDIKp~NILi~~ 903 (908)
.+||||||+++++|.++|. ..+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s 160 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST 160 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence 7999999999999999885 4699999999999999999999984 4999999999999975
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.7e-18 Score=191.87 Aligned_cols=142 Identities=12% Similarity=0.142 Sum_probs=120.9
Q ss_pred cccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.+..++|.+.+.||+|+||.||+|++. .+++.+|+|+++.... ......+.+|+.+|..+..||||+++++.+
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 456778999999999999999999864 3456899999875432 223456889999999996699999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc-C-------------------------------------------------------
Q 002560 840 ADSMHAGLLLNTYLACPLASILH-T------------------------------------------------------- 863 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~-~------------------------------------------------------- 863 (908)
.....+|+||||+++|+|.++++ .
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 99999999999999999999985 1
Q ss_pred --------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcE
Q 002560 864 --------------------------------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899 (908)
Q Consensus 864 --------------------------------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NI 899 (908)
.++...+..++.|++.||.|||++||+||||||+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni 270 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV 270 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence 245667788999999999999999999999999999
Q ss_pred EEcCCCccC
Q 002560 900 MLDKSGHLQ 908 (908)
Q Consensus 900 Li~~~g~vK 908 (908)
|+++++.+|
T Consensus 271 Ll~~~~~~k 279 (401)
T cd05107 271 LICEGKLVK 279 (401)
T ss_pred EEeCCCEEE
Confidence 999887654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.3e-18 Score=183.56 Aligned_cols=140 Identities=12% Similarity=0.196 Sum_probs=122.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCC----------------ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSE----------------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~----------------~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~ 829 (908)
+..++|++++.||+|+||.||++.+...+ ..+|+|.+...... .....+.+|+.+++.++ |
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~-~ 78 (296)
T cd05051 2 FPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLS-D 78 (296)
T ss_pred CchhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcC-C
Confidence 34678999999999999999999876544 45799988754322 34567889999999995 9
Q ss_pred CccceeeeeeccCCeEEEEEecCCCCcHHHHHc--C-----------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCC
Q 002560 830 ACVPQILCTCADSMHAGLLLNTYLACPLASILH--T-----------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSP 896 (908)
Q Consensus 830 ~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~--~-----------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp 896 (908)
|+|+++++++......+++|||+++++|.+++. . .+++..+..++.|++.||.|||++||+||||||
T Consensus 79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp 158 (296)
T cd05051 79 PNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLAT 158 (296)
T ss_pred CCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccch
Confidence 999999999999999999999999999999986 3 589999999999999999999999999999999
Q ss_pred CcEEEcCCCccC
Q 002560 897 DVLMLDKSGHLQ 908 (908)
Q Consensus 897 ~NILi~~~g~vK 908 (908)
+||+++.++.+|
T Consensus 159 ~Nili~~~~~~~ 170 (296)
T cd05051 159 RNCLVGKNYTIK 170 (296)
T ss_pred hceeecCCCceE
Confidence 999999887653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=181.14 Aligned_cols=138 Identities=14% Similarity=0.182 Sum_probs=120.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee-----cc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC-----AD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~-----~~ 841 (908)
..++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|..+++.+.+||||+++++.+ ..
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 3578999999999999999999999999999999876432 12346778999999986699999999876 34
Q ss_pred CCeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....|++|||+++++|.+++. ..+++..+..++.|++.||.|||+++|+||||||+||+++.+|.+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEE
Confidence 567999999999999998864 4688999999999999999999999999999999999999988664
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-18 Score=176.28 Aligned_cols=139 Identities=15% Similarity=0.193 Sum_probs=118.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD- 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~- 841 (908)
.+..|+.++.||+|+||.||++..++++. .||+|.++...- ..+......+|+.+++.++ |||++.+...|-.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~ 99 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELK-HPNVISLVKVFLSH 99 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhc-CCcchhHHHHHhcc
Confidence 46789999999999999999997665533 789998865432 2344567889999999995 9999999988876
Q ss_pred CCeEEEEEecCCCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC----CccC
Q 002560 842 SMHAGLLLNTYLACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS----GHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~----g~vK 908 (908)
+..+|+++||.+. +|+.+++ +.++...++.+++||+.|+.|||++=|+||||||.|||+..+ |.+|
T Consensus 100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeE
Confidence 7899999999965 9999986 458999999999999999999999999999999999999988 6654
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=177.90 Aligned_cols=136 Identities=11% Similarity=0.124 Sum_probs=122.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
++.++|++.+.||.|+||.||++... ++.+|+|.+..... ...++.+|..+++.++ |++|+++++.+.+....
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 75 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLR-HPNLVQLLGVVLQGNPL 75 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcC-CcceeeeEEEEcCCCCe
Confidence 35788999999999999999999874 78899999865432 4567889999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. . .+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~ 142 (256)
T cd05039 76 YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAK 142 (256)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEE
Confidence 99999999999999997 2 689999999999999999999999999999999999999888654
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=182.44 Aligned_cols=136 Identities=11% Similarity=0.122 Sum_probs=122.7
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|++++.||.|+||.||++++..++..+++|++.... ......+.+|+.+++.++ |||++++++.+......|++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATCN-HPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCeEEEE
Confidence 55999999999999999999999999999999986542 234567888999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~k 150 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIK 150 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEE
Confidence 99999999988875 5689999999999999999999999999999999999999888764
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.7e-18 Score=188.52 Aligned_cols=131 Identities=18% Similarity=0.186 Sum_probs=116.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
...+|++++.||+|+||.||++.+..+++.+|+|+..+. ....|..+++.++ ||||+++++++......|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVN-HPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCC-CCCCcChhheEEeCCeeE
Confidence 345799999999999999999999999999999975432 2346889999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||++. ++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 134 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~k 197 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVC 197 (357)
T ss_pred EEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 9999995 68888875 5789999999999999999999999999999999999999888764
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.2e-18 Score=184.27 Aligned_cols=137 Identities=16% Similarity=0.171 Sum_probs=122.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||++.+..+++.+|+|.+.... .......+.+|+.+++.++ ||||+++++.+...++.|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAV-SPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcC-CCcHHhhhhheecCCeEEEE
Confidence 47899999999999999999999999999999886432 2223467889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILHT-----PLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~~-----~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++.. .+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+|
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~ 143 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVK 143 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEE
Confidence 999999999999873 79999999999999999999997 5999999999999999988764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=191.95 Aligned_cols=133 Identities=11% Similarity=0.126 Sum_probs=111.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD----- 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~----- 841 (908)
...+|++.+.||+|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.++ ||||++++++|..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLN-HINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcC-CCCCcceeeeEeeccccc
Confidence 4567999999999999999999999999999999875432 12346999999995 9999999877632
Q ss_pred ---CCeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC-ccC
Q 002560 842 ---SMHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQ 908 (908)
Q Consensus 842 ---~~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g-~vK 908 (908)
..++|++|||+++ +|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vk 211 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLK 211 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCcee
Confidence 2357899999975 6766653 5689999999999999999999999999999999999999665 343
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=181.32 Aligned_cols=139 Identities=9% Similarity=0.134 Sum_probs=121.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+...+|.+.+.||+|+||.||++... .++..+|+|.+.... ......+.+|+.+++.+. ||+|+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~ 77 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQ-HEHIVKFYGVCV 77 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCC-CCCcceEEEEEe
Confidence 45678999999999999999999853 345578999876532 223557889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc--C-------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 841 DSMHAGLLLNTYLACPLASILH--T-------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~--~-------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
.....|++|||+++++|.+++. + .+++..+..++.|++.||.|||++||+||||||+|||+++++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 78 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 157 (288)
T ss_pred cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999999999999999986 2 389999999999999999999999999999999999999988
Q ss_pred ccC
Q 002560 906 HLQ 908 (908)
Q Consensus 906 ~vK 908 (908)
.+|
T Consensus 158 ~~k 160 (288)
T cd05093 158 LVK 160 (288)
T ss_pred cEE
Confidence 764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.4e-18 Score=181.88 Aligned_cols=140 Identities=14% Similarity=0.171 Sum_probs=121.7
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCC-----ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSE-----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~-----~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+.+++|++.+.||+|+||.||++.....+ ..+|+|.+.... .......+.+|+.++..+. ||+|+++++++.
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~ 78 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQ-HPNIVCLLGVCT 78 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcC-CcccceEEEEEc
Confidence 56789999999999999999999876554 689999876432 2234456889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 841 DSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
+....|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++
T Consensus 79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG 158 (283)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc
Confidence 9999999999999999999986 2367888999999999999999999999999999999999
Q ss_pred CCCccC
Q 002560 903 KSGHLQ 908 (908)
Q Consensus 903 ~~g~vK 908 (908)
+++.+|
T Consensus 159 ~~~~~~ 164 (283)
T cd05048 159 EGLTVK 164 (283)
T ss_pred CCCcEE
Confidence 988654
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-17 Score=181.48 Aligned_cols=142 Identities=11% Similarity=0.132 Sum_probs=122.9
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCC-----ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSE-----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~-----~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.+..++|++.+.||+|+||.||++...... ..+|+|.+..... ......+.+|+.++..+.+|+||+++++.+
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 456678999999999999999999876443 6899998865421 223456889999999985699999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE
Q 002560 840 ADSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi 901 (908)
.....+|++|||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 99999999999999999999984 357889999999999999999999999999999999999
Q ss_pred cCCCccC
Q 002560 902 DKSGHLQ 908 (908)
Q Consensus 902 ~~~g~vK 908 (908)
+.+|.+|
T Consensus 166 ~~~~~~k 172 (293)
T cd05053 166 TEDHVMK 172 (293)
T ss_pred cCCCeEE
Confidence 9988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-18 Score=188.64 Aligned_cols=138 Identities=13% Similarity=0.169 Sum_probs=122.2
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+..+.+++++.||+|-||.||++.+.. ...+|+|.++.... ..+.+.+|+.+|++|+ |++|+++++++.....
T Consensus 202 ei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~p 275 (468)
T KOG0197|consen 202 EIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEP 275 (468)
T ss_pred eecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCc
Confidence 3455667888999999999999999853 34789998865432 3457889999999996 9999999999999889
Q ss_pred EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||||||++.|+|.++|+ ..++......++.||++|++||+++++|||||-..||||++++.+|
T Consensus 276 iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vK 343 (468)
T KOG0197|consen 276 IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVK 343 (468)
T ss_pred eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEE
Confidence 999999999999999998 5689999999999999999999999999999999999999998876
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-18 Score=175.63 Aligned_cols=129 Identities=14% Similarity=0.131 Sum_probs=114.1
Q ss_pred ccceEEE-EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec----cC
Q 002560 768 LTDMEWR-KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA----DS 842 (908)
Q Consensus 768 ~~~~~~~-~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~----~~ 842 (908)
.++|.+- ++||-|-.|.|..|.++.|++.||+|++... ....+|+++....+.||||+.+++.|. ..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4566664 5799999999999999999999999987543 256689999888889999999998775 45
Q ss_pred CeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 843 MHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
.++.+|||+++||+|+..++ +.|+|.++..|+.||..|+.|||+.+|.||||||||+|....
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t 197 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT 197 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC
Confidence 78899999999999999997 569999999999999999999999999999999999998754
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=176.46 Aligned_cols=137 Identities=14% Similarity=0.150 Sum_probs=123.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++++.||.|+||.||+++...+++.+++|.+...... ......+.+|+.+++.++ |+||+++++.+.+...++++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhCC-CCCeeEEEeEEecCCeEEEEE
Confidence 589999999999999999999999999999988654422 234557889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+|
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~k 141 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIK 141 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEE
Confidence 9999999999997 3589999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-17 Score=181.08 Aligned_cols=145 Identities=14% Similarity=0.104 Sum_probs=123.0
Q ss_pred cccccccccceEEE--EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeee
Q 002560 761 SSLAKVSLTDMEWR--KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838 (908)
Q Consensus 761 ~~~~~~~~~~~~~~--~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~ 838 (908)
.+...++.++++.. ..||+|++|.||++.. +++.+|+|.+++.........+.+.+|+.+|.+++ ||||++++++
T Consensus 10 ~~~~~i~~~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~ 86 (283)
T PHA02988 10 NDIKCIESDDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGF 86 (283)
T ss_pred CcceecCHHHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeee
Confidence 34445566666665 6799999999999987 68899999987654333333567889999999995 9999999998
Q ss_pred ecc----CCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 839 CAD----SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 839 ~~~----~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.+ ...++++|||+++|+|.+++. +.+++.....++.+++.||.|||+ .+++||||||+|||++++|.+|
T Consensus 87 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~k 163 (283)
T PHA02988 87 IIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLK 163 (283)
T ss_pred EEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEE
Confidence 866 457899999999999999997 678999999999999999999998 4999999999999999998765
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-17 Score=175.93 Aligned_cols=137 Identities=13% Similarity=0.148 Sum_probs=119.8
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-CCeEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-SMHAGLL 848 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~-~~~~~iv 848 (908)
+|++.+.||+|++|.||++.++.+++.+|+|.+...... ......+.+|..+++.++ |++++++++.+.. ...+|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLK-HPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCC-CCCeeeeeeeecCCCCEEEEE
Confidence 589999999999999999999999999999998654322 224456888999999995 9999999988764 4578999
Q ss_pred EecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~ 142 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIK 142 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEE
Confidence 99999999999986 4589999999999999999999999999999999999999888654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.7e-18 Score=181.20 Aligned_cols=137 Identities=13% Similarity=0.127 Sum_probs=122.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
...+|++.+.||.|+||.||++.+.. +..+++|++..... .....+..|+.+++.++ ||+|+++++.+.+....|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL---LKQQDFQKEVQALKRLR-HKHLISLFAVCSVGEPVY 78 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch---hhHHHHHHHHHHHhcCC-CcchhheeeeEecCCCeE
Confidence 34679999999999999999999987 88999999876442 23456788999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~k 144 (261)
T cd05148 79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCK 144 (261)
T ss_pred EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEE
Confidence 9999999999999997 4589999999999999999999999999999999999999988664
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=178.38 Aligned_cols=134 Identities=24% Similarity=0.360 Sum_probs=116.6
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||.|+||.||+|.+..+++.+|+|++++...........+..|..++....+||+++++++.+...+..|++|||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999999999999999987655433333445566666665554699999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. +.+++..+..++.|++.||.|||++||+||||+|+||+++.++.+|
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~ 137 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLK 137 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEE
Confidence 99999997 6789999999999999999999999999999999999999887654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-17 Score=179.39 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=119.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
++.++|++.+.||+|+||.||++.+..+++ .||+|++.... .......+.+|..++..+. ||||+++++.+..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~ 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVG-SPYVCRLLGICLT 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcC-CCCCceEEEEEcC
Confidence 467889999999999999999999877766 48999876432 2223567888999999984 9999999988865
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+++|+|+++|+|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~k 149 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVK 149 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEE
Confidence 45789999999999999996 4689999999999999999999999999999999999999887664
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-17 Score=181.69 Aligned_cols=138 Identities=12% Similarity=0.180 Sum_probs=123.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.+|+|.+.+..... .....+.+|+.+++.++ ||+|+++++.+.+....|++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLR-HENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcC-CcchhhHHHhcccCCeEEEE
Confidence 47999999999999999999999899999999876543222 34556788999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++++.|..+.. ..+++..+..++.|++.||.|||++||+|+||+|+||++++++.+|
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~ 140 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVK 140 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEE
Confidence 99999999988776 5689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.2e-19 Score=170.93 Aligned_cols=131 Identities=16% Similarity=0.232 Sum_probs=116.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--Ce
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MH 844 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~ 844 (908)
..++|++.+++|+|.|+.||.+.+..+++.+++|+++.-. ...+.+|+.||..|+++|||+++++...+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 5688999999999999999999999999999999986543 457889999999999999999999998765 45
Q ss_pred EEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
..+++||+.+.+...+. ..++...++.|+.+++.||.|+|++||+|||+||.|+|||..
T Consensus 110 paLiFE~v~n~Dfk~ly-~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~ 168 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY-PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHE 168 (338)
T ss_pred chhHhhhhccccHHHHh-hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechh
Confidence 67999999887776654 578899999999999999999999999999999999999964
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-17 Score=191.06 Aligned_cols=130 Identities=15% Similarity=0.160 Sum_probs=116.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
...|.+.+.||+|+||.||++.+..+++.+|+|... ...+.+|+.+|+.++ |+||+++++++......|+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLS-HPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEE
Confidence 457999999999999999999999999999999532 123568999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+++. ++|..++. ..+++..++.++.|++.||.|||++||+||||||+||||+.++.+|
T Consensus 238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vk 300 (461)
T PHA03211 238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDIC 300 (461)
T ss_pred EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEE
Confidence 999995 68888875 4699999999999999999999999999999999999999888764
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=179.12 Aligned_cols=136 Identities=15% Similarity=0.168 Sum_probs=121.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc---cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC---LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~---~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+|+..+.||+|+||.||++.+..+++.+|+|.+....... ......+.+|+.+++.++ |++|+++++.+.+.++.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEE
Confidence 4788899999999999999999999999999987543211 223567889999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
++|||+++++|.+++. +.+++..+..++.|++.||.|||++|++|+||||+||+++.+|.
T Consensus 80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~ 141 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ 141 (268)
T ss_pred EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence 9999999999999997 67899999999999999999999999999999999999987763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=178.99 Aligned_cols=138 Identities=18% Similarity=0.263 Sum_probs=122.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc------cchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC------LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~------~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
.|.+.+.||.|+||.||++.+..+++.+|+|.+....... ....+.+.+|+.+++.+. ||+|+++++.+....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Confidence 3778899999999999999998899999999886543221 123456889999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.|++|||+++++|.+++. +.+++..+..++.|++.||.|||++|++||||||+||++++++.+|
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEE
Confidence 9999999999999999997 6789999999999999999999999999999999999999888654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=177.09 Aligned_cols=137 Identities=14% Similarity=0.149 Sum_probs=121.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++.+. +++.+|+|.++.... ....+.+|+.+++.++ ||||+++++++...+..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 76 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPI 76 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCC-CCCccceeEEEecCCCe
Confidence 45678999999999999999999875 456899999865432 2456888999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~ 143 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICK 143 (261)
T ss_pred eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEE
Confidence 99999999999999996 2589999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=178.23 Aligned_cols=138 Identities=18% Similarity=0.213 Sum_probs=121.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc-------cchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-------LGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~-------~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
.|.+.+.||.|+||.||++.+..+++.+|+|.+....... ....+.+..|..+++.++ ||+++++++.+...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccC
Confidence 4788899999999999999999899999999876432211 112356788999999995 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...++||||+++++|.+++. +.+++..++.++.|++.||.|||++|++||||||+||+++.+|.+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~ 148 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICK 148 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEE
Confidence 99999999999999999997 6789999999999999999999999999999999999999888654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-17 Score=182.86 Aligned_cols=139 Identities=11% Similarity=0.155 Sum_probs=119.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCC--------------ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCcc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSE--------------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACV 832 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~--------------~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i 832 (908)
..++|++.+.||+|+||.||+|++..++ ..+|+|.++... .......+.+|+.+++.++ ||++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i 79 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLK-NPNI 79 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCc
Confidence 4568999999999999999999875432 358999886532 2234557889999999995 9999
Q ss_pred ceeeeeeccCCeEEEEEecCCCCcHHHHHc-C-------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCc
Q 002560 833 PQILCTCADSMHAGLLLNTYLACPLASILH-T-------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898 (908)
Q Consensus 833 ~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~-~-------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~N 898 (908)
+++++.+......|++|||+++++|.+++. . .+++..+..++.|++.||.|||++|++||||||+|
T Consensus 80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N 159 (295)
T cd05097 80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN 159 (295)
T ss_pred CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence 999999999999999999999999999985 1 26788889999999999999999999999999999
Q ss_pred EEEcCCCccC
Q 002560 899 LMLDKSGHLQ 908 (908)
Q Consensus 899 ILi~~~g~vK 908 (908)
||++.++.+|
T Consensus 160 ill~~~~~~k 169 (295)
T cd05097 160 CLVGNHYTIK 169 (295)
T ss_pred EEEcCCCcEE
Confidence 9999887654
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=182.51 Aligned_cols=142 Identities=11% Similarity=0.144 Sum_probs=121.2
Q ss_pred cccccceEEEEEecCCCeEEEEEEEEC-------CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLR-------DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~-------~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
.+...+|++.+.||+|+||.||++++. ..+..+|+|.+.... .......+.+|+.+++.+.+||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 356789999999999999999999753 234579999876432 22345678899999999966999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcE
Q 002560 838 TCADSMHAGLLLNTYLACPLASILHT------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~~------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NI 899 (908)
.+......|++|||+++++|.+++.. .++...+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 99999999999999999999999861 367778899999999999999999999999999999
Q ss_pred EEcCCCccC
Q 002560 900 MLDKSGHLQ 908 (908)
Q Consensus 900 Li~~~g~vK 908 (908)
|++.+|.+|
T Consensus 169 li~~~~~~k 177 (304)
T cd05101 169 LVTENNVMK 177 (304)
T ss_pred EEcCCCcEE
Confidence 999888664
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.5e-17 Score=170.48 Aligned_cols=181 Identities=24% Similarity=0.285 Sum_probs=103.4
Q ss_pred EecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcC--hHHHHHHHHHHHHHHHHhcCCcchh--HHHHHHHH
Q 002560 100 LSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEF--GAQCSQFVKRKLCENLLRNNKFHED--AVDACHSS 175 (908)
Q Consensus 100 ~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~--G~~as~~~~~~l~~~l~~~~~~~~~--~~~~l~~~ 175 (908)
.|++| .+..|||++.+... ++..+++||||+|+. |+.+|+.+++.+.+.+.+....... ....++.+
T Consensus 3 ~sh~~-----~~~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~ 73 (212)
T PF13672_consen 3 RSHRG-----RGAPNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAI 73 (212)
T ss_dssp ----T-----TSSS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred ccccC-----CCCCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 35667 78999999996542 455677999999986 8999999999999999877653332 22223333
Q ss_pred HHHHHHHH------HhccCCCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHH
Q 002560 176 YLTTNSQL------HADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKL 249 (908)
Q Consensus 176 ~~~~~~~i------~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~ 249 (908)
...+...+ .........++||++++++.++.++++|+||||+|+..+++ ....++.+|+ .+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g---~~~~l~~~~~----~~~~~--- 143 (212)
T PF13672_consen 74 KKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG---EIQQLTDDHS----GEYPN--- 143 (212)
T ss_dssp HHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT---EEEE-S---B----HHHHH---
T ss_pred HHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC---EEEEcCCCcc----chhhh---
Confidence 22322211 11122344579999999999999999999999998776554 2566888884 11100
Q ss_pred cCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEE
Q 002560 250 SGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFV 329 (908)
Q Consensus 250 ~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flv 329 (908)
.++.+.... .....++..+++.++|. |+
T Consensus 144 ----------------------------------------------~~~~~~~~~-----~~~~~~~~~~~~~~~d~-il 171 (212)
T PF13672_consen 144 ----------------------------------------------QTRSLTGDD-----PEPDVQYGSIPLEEGDV-IL 171 (212)
T ss_dssp ----------------------------------------------CTTSCCHHC-----CCTETEEEEEE--TT-E-EE
T ss_pred ----------------------------------------------hhhccCccc-----cccCCeEEEEEcCCCCE-EE
Confidence 011111110 11234667778888998 69
Q ss_pred EEcCccccccChHH-HHHHHhcc
Q 002560 330 LASDGVFEFLSSQA-VVDMVAKY 351 (908)
Q Consensus 330 laSDGl~d~l~~~e-i~~~v~~~ 351 (908)
|||||||+.+.+.+ +..++...
T Consensus 172 L~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 172 LCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp EE-HHHHTTS-HHHHHHHH----
T ss_pred EECcCccccCCCHHHHHHHhhhc
Confidence 99999999998655 66666543
|
... |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=180.86 Aligned_cols=136 Identities=10% Similarity=0.160 Sum_probs=117.7
Q ss_pred ceEEEEEecCCCeEEEEEEEE----CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--C
Q 002560 770 DMEWRKCLYSTDCSEIGLVLL----RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--M 843 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~ 843 (908)
-|++++.||+|+||.||+|.. ..++..+|+|.++... .......+.+|+.+++.+. |||++++++.+.+. .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCC
Confidence 478899999999999999974 4567899999986432 2233457889999999995 99999999988765 6
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||++|++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~ 149 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 149 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEE
Confidence 7899999999999999986 3589999999999999999999999999999999999999888654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-18 Score=203.24 Aligned_cols=138 Identities=15% Similarity=0.201 Sum_probs=120.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc------
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD------ 841 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~------ 841 (908)
+++|+.++.||+|+||.||+|+++-+|+.||||.+.... .......+.+|+.+|.+|+ ||||+++|..|..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLn-HpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLN-HPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcC-CcceeeeehhhhccCCccc
Confidence 678999999999999999999999999999999998765 3445678999999999995 9999999865510
Q ss_pred -------------------------------------------------C------------------------------
Q 002560 842 -------------------------------------------------S------------------------------ 842 (908)
Q Consensus 842 -------------------------------------------------~------------------------------ 842 (908)
.
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 0
Q ss_pred ----------------------------------CeEEEEEecCCCCcHHHHHc-CCCC--HHHHHHHHHHHHHHHHHHH
Q 002560 843 ----------------------------------MHAGLLLNTYLACPLASILH-TPLD--EQSARFCAASVVAALEDLH 885 (908)
Q Consensus 843 ----------------------------------~~~~iv~e~~~gg~L~~~l~-~~l~--~~~~~~~~~qi~~aL~~LH 885 (908)
..+||-||||+..+|.++++ +.+. ...++.+++||++||.|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 24789999999988888888 5554 7889999999999999999
Q ss_pred hCCcEecCCCCCcEEEcCCCccC
Q 002560 886 KRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 886 ~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||||||||.||++|+++.||
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VK 737 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVK 737 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCee
Confidence 99999999999999999999886
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-17 Score=179.86 Aligned_cols=136 Identities=16% Similarity=0.247 Sum_probs=122.8
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||++.+..+++.+|+|++...... ......+.+|+.+++.++ ||+++++++.+.+....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEe
Confidence 589999999999999999999999999999998765422 234567889999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+ +++|.+++. ..+++..++.++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~ 139 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLK 139 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEE
Confidence 999 999999986 5689999999999999999999999999999999999999887653
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=178.73 Aligned_cols=140 Identities=14% Similarity=0.164 Sum_probs=121.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||++..+.. +..+|+|.+.... .......+.+|+.+++.++ ||+|+++++.+.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~ 79 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVS 79 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEc
Confidence 4578899999999999999999988643 3789999976443 1223456888999999985 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHcC------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILHT------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~~------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.....|++|||+++++|.+++.. .+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 99999999999999999999851 257788999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-17 Score=179.78 Aligned_cols=137 Identities=15% Similarity=0.193 Sum_probs=116.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.++.+++.||+|.+++.... .....+..|..++.+..+|||++++++.+......|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 4799999999999999999999999999999998754321 12345666777655545699999999999999999999
Q ss_pred EecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++ ++|.+++. ..+++..+..++.|++.||.|||++ +++||||||+|||++.++.+|
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~k 144 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVK 144 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEE
Confidence 99996 67877764 3689999999999999999999997 999999999999999988764
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.4e-19 Score=190.26 Aligned_cols=136 Identities=14% Similarity=0.176 Sum_probs=124.0
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|.-++.||.|+||.||.+++..+.+.||||.++-+.-.....+..++.|+..|.+++ |||++.+-++|-.....|+|||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeeccchHHHHHH
Confidence 666788999999999999999999999999998766556677888999999999996 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||-| +-.+++. +++-+.++..|..+.+.||.|||+++.||||||..|||+.+.|.||
T Consensus 107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VK 166 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVK 166 (948)
T ss_pred HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeee
Confidence 9964 6666665 8999999999999999999999999999999999999999999886
|
|
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-17 Score=181.87 Aligned_cols=142 Identities=11% Similarity=0.112 Sum_probs=122.6
Q ss_pred cccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.+..++|.+.+.||+|+||.||++.+. .++..+|+|+++.... ....+.+.+|+.+++++.+||||+++++.+
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 456788999999999999999999753 3455899998765431 223457889999999995699999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 840 ADSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+..|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.+|
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEE
Confidence 99999999999999999999986 2389999999999999999999999999999999999999877653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-17 Score=179.25 Aligned_cols=135 Identities=13% Similarity=0.195 Sum_probs=116.0
Q ss_pred eEEEEEecCCCeEEEEEEEE----CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCe
Q 002560 771 MEWRKCLYSTDCSEIGLVLL----RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMH 844 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~ 844 (908)
|++.+.||+|+||.||++.. ..++..+|+|.+..... ......+.+|+.+++.++ ||||+++++++.. ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLY-HENIVKYKGCCSEQGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCce
Confidence 48899999999999988753 34677999999865421 123456788999999995 9999999987654 456
Q ss_pred EEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~ 147 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVK 147 (283)
T ss_pred EEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEE
Confidence 899999999999999998 7899999999999999999999999999999999999999888664
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=182.23 Aligned_cols=141 Identities=13% Similarity=0.143 Sum_probs=121.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-------CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeee
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-------SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-------~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~ 838 (908)
+..++|.+.+.||+|+||.||++++.. ....+|+|.+.... .......+..|+.+++.+.+||||++++++
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 456789999999999999999998642 34578999876432 223456788999999998669999999999
Q ss_pred eccCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEE
Q 002560 839 CADSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900 (908)
Q Consensus 839 ~~~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NIL 900 (908)
+.+....|++|||+++++|.+++. ..++...+..++.|++.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 999999999999999999999985 13788889999999999999999999999999999999
Q ss_pred EcCCCccC
Q 002560 901 LDKSGHLQ 908 (908)
Q Consensus 901 i~~~g~vK 908 (908)
++.+|.+|
T Consensus 167 l~~~~~~k 174 (314)
T cd05099 167 VTEDNVMK 174 (314)
T ss_pred EcCCCcEE
Confidence 99988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-17 Score=181.44 Aligned_cols=136 Identities=17% Similarity=0.200 Sum_probs=120.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||+|.+..+++.+|+|.++.... .......+.+|+.+++.++ |||++++++.+.+....|+++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcC-CCCeeeHHHHhccCCceEEEE
Confidence 48899999999999999999999999999999865432 2223456778999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+. ++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~ 139 (284)
T cd07839 79 EYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELK 139 (284)
T ss_pred ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEE
Confidence 9996 57877775 5689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-17 Score=177.14 Aligned_cols=140 Identities=10% Similarity=0.087 Sum_probs=122.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCc---eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
+..++|+..+.||+|+||.||++.++.++. .+|+|.+.... .......+..|+.++..++ |||++++++.+.+.
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 78 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFS-HHNIIRLEGVVTKF 78 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEccC
Confidence 456789999999999999999999876554 78999876542 1223557889999999995 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+..|++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~k 147 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECK 147 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEE
Confidence 99999999999999999986 4689999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-17 Score=179.32 Aligned_cols=137 Identities=16% Similarity=0.176 Sum_probs=124.3
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
...|++.+.||.|+||.||++.+..+++.+++|.+.... ......+.+|+.+++.++ |||++++++.+......|+
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELK-NPNIVNFLDSFLVGDELFV 93 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcC-CCceeeeeeeEecCceEEE
Confidence 356999999999999999999999999999999886533 234567889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|..++. ..+++..+..++.|++.||.|||++|++||||||+||+++.+|.+|
T Consensus 94 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~k 155 (296)
T cd06655 94 VMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVK 155 (296)
T ss_pred EEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 999999999999988 6799999999999999999999999999999999999999888764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-17 Score=187.79 Aligned_cols=132 Identities=17% Similarity=0.243 Sum_probs=116.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC--CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD--SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~--~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
...+|++++.||+|+||.||+|.... ++..+|+|.+.... ...+|+.+++.++ ||+|+++++.+.....
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~-h~~iv~~~~~~~~~~~ 160 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTIS-HRAIINLIHAYRWKST 160 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcC-CCCccceeeeEeeCCE
Confidence 34579999999999999999997643 45789999875432 3457999999995 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++||++. ++|.+++. ..+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~ 225 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAV 225 (392)
T ss_pred EEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEE
Confidence 999999995 68888886 6799999999999999999999999999999999999999988764
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-17 Score=181.75 Aligned_cols=140 Identities=15% Similarity=0.177 Sum_probs=125.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
++.++|++++.||+|+||.||++.+..+++.+|+|++.... .......+.+|+.+++.++ ||+|+++++.+.+....
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~ 78 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECR-SPYIVSFYGAFLNENNI 78 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcC-CCCcceEeeeEecCCEE
Confidence 46788999999999999999999999999999999876432 2334567889999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|..++. +.+++..+..++.+++.||.|||+ +||+||||||+||+++.++.+|
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~ 144 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIK 144 (284)
T ss_pred EEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEE
Confidence 99999999999999987 678999999999999999999997 6999999999999999887653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-17 Score=185.49 Aligned_cols=132 Identities=9% Similarity=0.060 Sum_probs=115.6
Q ss_pred EEecCC--CeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 775 KCLYST--DCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 775 ~~LG~G--~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
..||+| +||.||++++..+++.||+|++....... ...+.+.+|+.+++.++ ||||++++++|......|++|||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFR-HPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCC-CCCcceEeeeEecCCceEEEEecc
Confidence 356666 99999999999999999999986543222 34567888999988885 999999999999999999999999
Q ss_pred CCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 853 LACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 853 ~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~ 141 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVS 141 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEE
Confidence 9999999987 3589999999999999999999999999999999999999887654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.2e-17 Score=175.36 Aligned_cols=137 Identities=12% Similarity=0.168 Sum_probs=122.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++.+. .+..+|+|.+..... ....+.+|+.+++.++ ||+++++++.+......
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPI 76 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCce
Confidence 45788999999999999999999875 457799998875432 2356889999999996 99999999999998999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..++...+..++.|++.||.|||++||+|+||||+|||++.++.+|
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~ 143 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCK 143 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEE
Confidence 99999999999999996 3689999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.3e-17 Score=175.77 Aligned_cols=139 Identities=15% Similarity=0.170 Sum_probs=121.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhh--hhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--Ce
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQK--VKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~--~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~ 844 (908)
.+|++.+.||+|+||.||++.+..+++.+|+|.+.... .........+.+|+.+++.++ ||+|+++++.+.+. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCE
Confidence 57999999999999999999999999999999875422 112234567889999999995 99999999988654 56
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+|+||||+||+++.++.+|
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~ 146 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVK 146 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEE
Confidence 899999999999999987 6689999999999999999999999999999999999999887653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.7e-17 Score=179.50 Aligned_cols=138 Identities=18% Similarity=0.239 Sum_probs=118.7
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH---- 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~---- 844 (908)
++|++.+.||+|+||.||++.+..+++.+|+|.+.... ........+.+|+.+++.+.+||+|+++++.+.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 47999999999999999999999999999999876543 2223345678899999999878999999998876655
Q ss_pred -EEEEEecCCCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCccC
Q 002560 845 -AGLLLNTYLACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 845 -~~iv~e~~~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~vK 908 (908)
.|++|||+++ +|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+|
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~k 151 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLK 151 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEE
Confidence 8999999975 7888875 24799999999999999999999999999999999999998 66543
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-17 Score=176.99 Aligned_cols=131 Identities=28% Similarity=0.456 Sum_probs=120.0
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||.|+||.||+|.+..+++.+|+|++.+...........+.+|+.+++.++ ||+|+++++.+.+....|++|||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 699999999999999899999999998766554455678999999999995 9999999999999999999999999999
Q ss_pred HHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. ..+++..+..++.|++.||.|||++|++|+||||+||+++.+|.+|
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~ 133 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVK 133 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEE
Confidence 999997 5689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-17 Score=176.79 Aligned_cols=137 Identities=18% Similarity=0.243 Sum_probs=120.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhh---hccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKV---KCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~---~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+|++.+.||.|+||.||++.. .+++.+|+|.+..... ........+.+|+.+++.++ |+||+++++++.+....|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEE
Confidence 588899999999999999986 4788999998764321 12234467889999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..+++..+..++.|++.||.|||+.||+|+||||+||+++++|.+|
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~ 142 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIK 142 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEE
Confidence 9999999999999997 6789999999999999999999999999999999999999888664
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-17 Score=177.72 Aligned_cols=139 Identities=14% Similarity=0.175 Sum_probs=121.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+...+|++.+.||+|+||.||++.++.+++ .+|+|.+..... ......+.+|+.+++.++ |||++++++.+..
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~ 80 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVD-HPHVVRLLGICLS 80 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCC-CCCcceEEEEEec
Confidence 456789999999999999999999876654 689998765432 234567889999999995 9999999998877
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~k 149 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVK 149 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEE
Confidence 78999999999999999987 4689999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-17 Score=178.85 Aligned_cols=137 Identities=17% Similarity=0.182 Sum_probs=119.2
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.++|++.+.||+|+||.||++.+..+++.+|+|.+..... ......+.+|+.+++.++ |+||+++++++.+....|+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTF 80 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcC-CCCEeEEEEEEecCCeEEE
Confidence 4789999999999999999999999999999999865432 222345678999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+. ++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~ 143 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELK 143 (291)
T ss_pred EEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEE
Confidence 999995 67766664 4578889999999999999999999999999999999999888764
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-17 Score=178.50 Aligned_cols=133 Identities=22% Similarity=0.326 Sum_probs=112.4
Q ss_pred EecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhc--CCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV--SPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l--~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+..+++.||+|++.+..............|..+++.+ .+||+|+.++..+.+....|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998765443332333344454444333 258999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|..++. +.+++..++.++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~k 137 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 137 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEE
Confidence 999999886 6799999999999999999999999999999999999999888754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-17 Score=178.52 Aligned_cols=139 Identities=17% Similarity=0.172 Sum_probs=117.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..++|++.+.||+|+||.||++..+. .+..+|+|.+.... .......+.+|..+++.+. ||+|+++++.+.+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~ 80 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFT-CHHVVRLLGVVSK 80 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 45789999999999999999997653 24589999876433 1223446788999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc--C----------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH--T----------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~--~----------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....|++|||+++++|.+++. + .++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 999999999999999999996 1 235667889999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-17 Score=180.35 Aligned_cols=140 Identities=9% Similarity=0.096 Sum_probs=121.8
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|.+.+.||+|+||.||++.+.. +++.+|+|.++.... ......+.+|+.+++.+. ||+|+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~ 78 (280)
T cd05049 2 VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQ-HENIVKFYGVCT 78 (280)
T ss_pred CChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcC-CCCchheeeEEe
Confidence 356789999999999999999998753 357899999865432 224567899999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 841 DSMHAGLLLNTYLACPLASILH----------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~----------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
.....|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~ 158 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD 158 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC
Confidence 9999999999999999999986 136888999999999999999999999999999999999988
Q ss_pred CccC
Q 002560 905 GHLQ 908 (908)
Q Consensus 905 g~vK 908 (908)
+.+|
T Consensus 159 ~~~k 162 (280)
T cd05049 159 LVVK 162 (280)
T ss_pred CeEE
Confidence 8764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-17 Score=180.24 Aligned_cols=138 Identities=13% Similarity=0.199 Sum_probs=117.9
Q ss_pred ccceEEEEEecCCCeEEEEEEEECC----------------CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCc
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRD----------------SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC 831 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~----------------~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~ 831 (908)
.++|++.+.||+|+||.||+|.+.. ++..+|+|++.... .......+.+|+.+++.++ |++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~-~~~ 80 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLK-DPN 80 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCC
Confidence 4679999999999999999986532 34478999886542 2234567889999999995 999
Q ss_pred cceeeeeeccCCeEEEEEecCCCCcHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCc
Q 002560 832 VPQILCTCADSMHAGLLLNTYLACPLASILHT-------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898 (908)
Q Consensus 832 i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~~-------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~N 898 (908)
|+++++++......|++|||+++++|.+++.. .+++..+..++.|++.||.|||++||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N 160 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence 99999999999999999999999999999861 25677899999999999999999999999999999
Q ss_pred EEEcCCCccC
Q 002560 899 LMLDKSGHLQ 908 (908)
Q Consensus 899 ILi~~~g~vK 908 (908)
||++.++.+|
T Consensus 161 ili~~~~~~~ 170 (296)
T cd05095 161 CLVGKNYTIK 170 (296)
T ss_pred EEEcCCCCEE
Confidence 9999887654
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.2e-17 Score=178.97 Aligned_cols=134 Identities=13% Similarity=0.172 Sum_probs=120.7
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||.|+||.||++.+..++..+++|.+.... ......+.+|+.+++.+. |||++++++.+......|++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCEEEEEEE
Confidence 688899999999999999999999999999886433 234567888999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~k 143 (282)
T cd06643 83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIK 143 (282)
T ss_pred ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEE
Confidence 999999998875 5689999999999999999999999999999999999999888764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.7e-17 Score=173.55 Aligned_cols=137 Identities=14% Similarity=0.149 Sum_probs=122.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.+|++.+..+++.+|+|.+...... ......+.+|+.+++.++ ||+|+++++.+...++.|++|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCC-CCCeeeeEeeecCCCeEEEEE
Confidence 489999999999999999999999999999998754432 224457889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+|||++.++.+|
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~ 141 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIK 141 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEE
Confidence 9999999999986 2578999999999999999999999999999999999999887653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.4e-17 Score=174.74 Aligned_cols=135 Identities=13% Similarity=0.163 Sum_probs=117.9
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee-ccCCe
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC-ADSMH 844 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~-~~~~~ 844 (908)
+.+.+|++.+.||+|+||.||++... +..+|+|.++... ....+.+|+.+++.++ |++++++++.+ .....
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGG 74 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCCCc
Confidence 46789999999999999999999764 7789999875432 3456889999999995 99999999864 55678
Q ss_pred EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++++|.+|
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~k 142 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAK 142 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEE
Confidence 999999999999999986 2478999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-17 Score=181.52 Aligned_cols=139 Identities=16% Similarity=0.232 Sum_probs=121.6
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--Ce
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MH 844 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~ 844 (908)
.+++|++.+.||.|+||.||+|.+..+++.+++|.++..... ......+.+|+.++..++ ||||+++++.+... ..
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~ 80 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDK 80 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCc
Confidence 357899999999999999999999999999999998754432 223445678999999996 99999999988777 89
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++|||+.+ +|.+++. ..+++..++.++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 81 ~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~ 146 (293)
T cd07843 81 IYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILK 146 (293)
T ss_pred EEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEE
Confidence 9999999974 8988886 4589999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.1e-19 Score=191.69 Aligned_cols=136 Identities=13% Similarity=0.156 Sum_probs=123.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|+|+..||.|+||.||++.++.++-..|.|++... .....+.++-|+.||..+. ||+|++++..|...+.+||+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECD-HPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCceEEE
Confidence 4599999999999999999999988888888987543 3445678899999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|||.||-...++- ..+.+..++.+++|++.||.|||+++|||||||..|||++-+|.+|
T Consensus 108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdir 170 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIR 170 (1187)
T ss_pred EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEe
Confidence 99999999888775 7899999999999999999999999999999999999999999875
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-17 Score=175.83 Aligned_cols=135 Identities=10% Similarity=0.089 Sum_probs=116.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|++.+.||+|+||.||++.+..+ ..+|+|++++... ....+.+|+.+++.+. ||+|+++++.+.. ...|
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~-~~~~ 76 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIY 76 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCC-CCCcceEEEEECC-CCcE
Confidence 457799999999999999999988765 4599999875332 2346788999999995 9999999987754 5689
Q ss_pred EEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~ 142 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 142 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEE
Confidence 9999999999999996 3478999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.5e-17 Score=177.43 Aligned_cols=135 Identities=16% Similarity=0.209 Sum_probs=119.9
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|++|.||++++..+++.+|+|.+..... ......+.+|+.+++.++ ||||+++++.+.+.+..|++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELK-HENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCcEEEEE
Confidence 58999999999999999999999999999999875432 223456778999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++ +|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++++|.+|
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~ 140 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELK 140 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEE
Confidence 99975 8888875 3589999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.8e-17 Score=175.44 Aligned_cols=139 Identities=14% Similarity=0.145 Sum_probs=121.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCe
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~ 844 (908)
.+|++.+.||+|+||.||++.+..++..+++|.+...... .......+.+|+.+++.++ ||||+++++.+.+ ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKT 80 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCE
Confidence 4789999999999999999999999999999988654321 1234557888999999995 9999999998765 467
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+++++|.+++. +.+++.....++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 81 ~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~ 146 (266)
T cd06651 81 LTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVK 146 (266)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEE
Confidence 899999999999999987 6789999999999999999999999999999999999999887654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.1e-17 Score=174.23 Aligned_cols=137 Identities=18% Similarity=0.203 Sum_probs=123.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|+||.||++....++..+++|++....... ....+.+|+.+++.++ |++++++++.+......|++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCEEEEE
Confidence 47999999999999999999998899999999986544322 4567889999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||++++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||++++++.+|
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~ 142 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVK 142 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEE
Confidence 99999999999986 2489999999999999999999999999999999999999887653
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.1e-17 Score=174.77 Aligned_cols=137 Identities=14% Similarity=0.220 Sum_probs=124.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||++.+..+++.+++|.+...... ......+.+|+.+++.++ |++|+++++.+...+..++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLK-HPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCC-CCChhheeeeEecCCEEEEEE
Confidence 488999999999999999999989999999998765432 346778999999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.+|
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~k 139 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIK 139 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 9999999999997 4589999999999999999999999999999999999999988664
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-17 Score=177.95 Aligned_cols=137 Identities=11% Similarity=0.151 Sum_probs=123.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|+..+.||.|+||.||++.+..++..+|+|++..... ......+.+|+.+++.+. ||+|+++++.+.+....|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEE
Confidence 457888999999999999999999999999999875432 234567889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +++++..+..++.|++.||.|||+++++|+||+|+||+++.++.+|
T Consensus 81 ~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~ 141 (277)
T cd06640 81 MEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVK 141 (277)
T ss_pred EecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEE
Confidence 99999999999998 7899999999999999999999999999999999999999887653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.7e-19 Score=207.93 Aligned_cols=176 Identities=15% Similarity=0.199 Sum_probs=141.0
Q ss_pred cCccccccccccCCcccCCCCCCCCC--ccccccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhh
Q 002560 730 VGPLTKISHDDQNSKDYSSDIPKKPA--KSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKV 807 (908)
Q Consensus 730 lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~ 807 (908)
+..+++...++++.+...-..-+... .....+++.++++ +|+....||.|.||.||.|.+..+|...|+|-+.....
T Consensus 1195 I~~le~~~~~~~r~~~~ig~v~d~~~~y~~kla~~lsnV~~-rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~ 1273 (1509)
T KOG4645|consen 1195 IRELEEKRKRNLRERGKIGQVCDTGNKYLNKLASSLSNVTF-RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDS 1273 (1509)
T ss_pred HHHHHHHHhhhhhhccceeeecccchHHHHHHHHHhcccee-eeccccccCCcceeeeEEeecCCccchhhhhhhhcCcc
Confidence 44455555555544433211111111 2234555666654 46667889999999999999999999999998876554
Q ss_pred hccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH
Q 002560 808 KCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLH 885 (908)
Q Consensus 808 ~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH 885 (908)
. ......+.+|..+|..++ |||++++|+.-.....+||.||||++|+|.+++. +..++...+.|..|++.|+.|||
T Consensus 1274 ~-~k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH 1351 (1509)
T KOG4645|consen 1274 D-HKTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLH 1351 (1509)
T ss_pred c-cccCcchHHHHHHHHhcc-CccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence 4 445667889999999996 9999999999999999999999999999999998 56788889999999999999999
Q ss_pred hCCcEecCCCCCcEEEcCCCccC
Q 002560 886 KRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 886 ~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||||||||+||+++.+|.+|
T Consensus 1352 ~~gIVHRDIK~aNI~Ld~~g~iK 1374 (1509)
T KOG4645|consen 1352 EHGIVHRDIKPANILLDFNGLIK 1374 (1509)
T ss_pred hcCceecCCCccceeeecCCcEE
Confidence 99999999999999999999876
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-17 Score=177.76 Aligned_cols=138 Identities=8% Similarity=0.198 Sum_probs=120.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEEC----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLR----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-- 841 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~-- 841 (908)
..+|++.+.||+|+||.||++... .+++.+|+|++...... .....+.+|+.+++.+. ||+|+++++++..
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~ 79 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLD-HENIVKYKGVCEKPG 79 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCC-CCChheEEeeeecCC
Confidence 457888999999999999999864 34789999998755432 34667899999999995 9999999988876
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+.|++|||+++++|.+++. ..++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~ 149 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVK 149 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEE
Confidence 668999999999999999997 3589999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.8e-17 Score=175.82 Aligned_cols=131 Identities=18% Similarity=0.269 Sum_probs=114.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC-------Cccceeeeeec-
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS-------ACVPQILCTCA- 840 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~-------~~i~~~~~~~~- 840 (908)
..|.+.++||=|.|++||+|++....++||||+.+... ...+..+.|+.+|++++.+ .+|+++++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 67999999999999999999999999999999986544 2445678899999998432 36899999885
Q ss_pred ---cCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCC
Q 002560 841 ---DSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 841 ---~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~ 904 (908)
...++|||+|++ |.+|..+|. +.++...++.|+.||+.||.|||. .||||-||||+|||+...
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence 457999999998 889999987 779999999999999999999996 599999999999999754
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.5e-17 Score=182.01 Aligned_cols=140 Identities=14% Similarity=0.146 Sum_probs=118.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC-------CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS-------ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~-------~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
...+|++.+.||+|+||.||+|++... ...+|+|.+.... .......+.+|+.+++++.+||||+++++.+
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 345799999999999999999986432 2368999876432 2234567889999999996699999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE
Q 002560 840 ADSMHAGLLLNTYLACPLASILHT------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~~------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi 901 (908)
.....+|++|||+++++|.+++.. .++...+..++.|++.||.|||++||+||||||+|||+
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill 167 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV 167 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 999999999999999999999851 26678888999999999999999999999999999999
Q ss_pred cCCCccC
Q 002560 902 DKSGHLQ 908 (908)
Q Consensus 902 ~~~g~vK 908 (908)
+.++.+|
T Consensus 168 ~~~~~~k 174 (334)
T cd05100 168 TEDNVMK 174 (334)
T ss_pred cCCCcEE
Confidence 9887654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-18 Score=184.21 Aligned_cols=137 Identities=12% Similarity=0.167 Sum_probs=124.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|..++.||+|+||.||++.+..+++.+|+|++...... ...+.+..|+.+|.+++ ++||.++|+.|..+..+|++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~--deIediqqei~~Ls~~~-~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE--DEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc--hhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHH
Confidence 4577779999999999999999999999999999876543 34677889999999985 89999999999999999999
Q ss_pred EecCCCCcHHHHHc-CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||.||++.+.|+ +. +++..+..++++++.||.|||.++.+|||||+.|||+..+|.+|
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vk 151 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVK 151 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEE
Confidence 99999999999999 44 59999999999999999999999999999999999999998875
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-17 Score=177.78 Aligned_cols=139 Identities=10% Similarity=0.150 Sum_probs=120.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
++..+|.+.+.||+|+||.||++.+.. ++..+++|.+..... .....+.+|+.+++.++ ||+|+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~ 77 (291)
T cd05094 2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL---AARKDFQREAELLTNLQ-HEHIVKFYGVCG 77 (291)
T ss_pred CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH---HHHHHHHHHHHHHhcCC-CCCcceEEEEEc
Confidence 467789999999999999999998643 445788888754332 23456889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 841 DSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
.....+++|||+++++|.+++. +.+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~ 157 (291)
T cd05094 78 DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG 157 (291)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc
Confidence 9999999999999999999985 1278899999999999999999999999999999999999
Q ss_pred CCCccC
Q 002560 903 KSGHLQ 908 (908)
Q Consensus 903 ~~g~vK 908 (908)
.++.+|
T Consensus 158 ~~~~~~ 163 (291)
T cd05094 158 ANLLVK 163 (291)
T ss_pred cCCcEE
Confidence 988764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-17 Score=176.74 Aligned_cols=131 Identities=26% Similarity=0.399 Sum_probs=119.9
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||.|+||.||++.+..+++.+++|++.............+.+|..+++.++ |||++++++.+......|++|||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999899999999987765544456678899999999996 9999999999999999999999999999
Q ss_pred HHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. +.+++..+..++.|++.||.|||++|++|+||+|+|||++.++.+|
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~ 133 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLK 133 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEE
Confidence 999997 6789999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-17 Score=184.50 Aligned_cols=140 Identities=13% Similarity=0.130 Sum_probs=117.6
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec-
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA- 840 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~- 840 (908)
.-++|++.+.||+|+||.||+|.... +++.||+|++..... ......+..|+.++..+.+|+||+++++++.
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 34579999999999999999997543 457899998864321 2234567889999999966999999998775
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----------------------------------------------------------
Q 002560 841 DSMHAGLLLNTYLACPLASILH---------------------------------------------------------- 862 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~---------------------------------------------------------- 862 (908)
....+|++|||+++++|.+++.
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 4567899999999999999884
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 863 -----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 863 -----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vk 213 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVK 213 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEE
Confidence 1578889999999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-18 Score=170.81 Aligned_cols=141 Identities=17% Similarity=0.280 Sum_probs=123.0
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
...+++++++..||.|++|.||+++.+.+|...|+|.+.+... .....+++..+.++....++|+|+++|++|..+..
T Consensus 88 ~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N--kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d 165 (391)
T KOG0983|consen 88 QADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD 165 (391)
T ss_pred ccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC--HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch
Confidence 4578899999999999999999999999999999999987653 23456788888888887669999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.||.|. ..+..++. ++++|..+-.+...++.||.||.+ +||||||+||+|||+|+.|++|
T Consensus 166 V~IcMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniK 232 (391)
T KOG0983|consen 166 VFICMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIK 232 (391)
T ss_pred HHHHHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEE
Confidence 999999883 34444444 889999999999999999999986 5899999999999999999987
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.5e-17 Score=172.88 Aligned_cols=134 Identities=14% Similarity=0.201 Sum_probs=120.8
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||++.+..+++.+|+|.+...... ......+.+|+.+++.++ ||+++++++.+...+..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLS-HPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCC-CCchhheeeeEecCCEEEEEE
Confidence 589999999999999999999999999999998765432 234567889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~ 138 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK 138 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 9999999999997 3489999999999999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-17 Score=176.87 Aligned_cols=136 Identities=12% Similarity=0.160 Sum_probs=122.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
-|++.+.||.|+||.||++.+..++..+|+|++..... ......+.+|+.++..++ ||+|+++++.+.++.+.|+||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEEE
Confidence 47788999999999999999988999999998764432 224467889999999985 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.|+.|||++|++|+||||+||+++.+|.+|
T Consensus 82 e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~ 141 (277)
T cd06641 82 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 141 (277)
T ss_pred EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEE
Confidence 9999999999998 7789999999999999999999999999999999999999888653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.1e-17 Score=173.93 Aligned_cols=137 Identities=20% Similarity=0.286 Sum_probs=124.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|++|.||++.+..+++.+++|++...... .....+.+|+.++..++ ||+++++++.+......|++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 77 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIV 77 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEE
Confidence 4799999999999999999999999999999998765321 34567889999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. ..+++.....++.|++.||.|||+ +|++||||+|+||+++.+|.+|
T Consensus 78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~ 140 (264)
T cd06623 78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVK 140 (264)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEE
Confidence 99999999999997 779999999999999999999999 9999999999999999888653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.4e-17 Score=176.92 Aligned_cols=137 Identities=11% Similarity=0.157 Sum_probs=122.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeeccCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~~~~~~i 847 (908)
.|++.+.||.|+||.||++.+..+++.+|+|.+.... .......+.+|+.+++.+. .||+++++++.+.+....|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 5788899999999999999999999999999886532 1223456788999999985 49999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. +.+++..+..++.|++.||.|||++||+|+||+|+||+++.+|.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~ 141 (277)
T cd06917 80 IMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVK 141 (277)
T ss_pred EEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEE
Confidence 999999999999998 7889999999999999999999999999999999999999888664
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-17 Score=176.26 Aligned_cols=130 Identities=15% Similarity=0.100 Sum_probs=109.3
Q ss_pred EecCCCeEEEEEEEECC--CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRD--SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~--~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.... ....+++|.+.... .......+.+|+.+++.++ ||||+++++.+......|++|||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELN-HPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCC-CCCcceEEEEECCCCceEEEEEeCC
Confidence 58999999999996543 34578888765432 1223456788999999985 9999999999999999999999999
Q ss_pred CCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~k 140 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVK 140 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEE
Confidence 999999986 1246778899999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-17 Score=173.86 Aligned_cols=138 Identities=20% Similarity=0.207 Sum_probs=122.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.|+..+.||+|+||.||++.+..+++.+++|.+...... .......+.+|+.+++.++ |++++++++.+.+....|+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC-CCCchheeeeEecCCeEEE
Confidence 367788999999999999999989999999998654321 1234567889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~k 142 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVK 142 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 999999999999997 5689999999999999999999999999999999999999888764
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-17 Score=176.99 Aligned_cols=136 Identities=13% Similarity=0.174 Sum_probs=119.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc------C
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD------S 842 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~------~ 842 (908)
+.|++.+.||+|+||.||++.+..+++.+|+|++.... .....+.+|+.++..+.+|||++++++.+.. .
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45888899999999999999999999999999986532 2345678899999998679999999998764 3
Q ss_pred CeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+.+++|.+++. ..+++..+..++.|++.||.|||+++|+||||||+||++++++.+|
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~ 151 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVK 151 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEE
Confidence 56899999999999999987 3589999999999999999999999999999999999999988654
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.4e-17 Score=174.27 Aligned_cols=136 Identities=13% Similarity=0.149 Sum_probs=118.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+.-++|++++.||+|+||.||+|..+ +++.+|+|.+..... ....+.+|+.+++.+. ||+++++++.+. ....
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~ 75 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQ-HPRLVRLYAVVT-QEPI 75 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcC-CcCeeeEEEEEc-cCCc
Confidence 34578999999999999999999865 567899998865432 2357889999999995 999999998874 4578
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..++...+..++.|++.||.|||++|++||||||+||++++++.++
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~ 142 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCK 142 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEE
Confidence 99999999999999986 4689999999999999999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.4e-17 Score=175.71 Aligned_cols=137 Identities=14% Similarity=0.190 Sum_probs=120.0
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
.++|++.+.||+|+||.||++....+++.+|+|++.... .....+.+|..++..+.+|||++++++.+...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 577999999999999999999999999999999986532 12346778999999986699999999887543
Q ss_pred CeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+++++|.++++ ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEE
Confidence 46899999999999998874 4689999999999999999999999999999999999999888654
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.72 E-value=4e-17 Score=176.70 Aligned_cols=139 Identities=14% Similarity=0.125 Sum_probs=116.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+..++|++.+.||+|+||.||++.+..+++ .+++|.+.... .......+..|..++..+. ||||+++++++.
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~-h~~iv~~~~~~~- 79 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLD-HAYIVRLLGICP- 79 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcCC-CCCcceEEEEEC-
Confidence 456889999999999999999999887776 46667654221 1223356777888888885 999999999875
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....++++||+++++|.+++. +.+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~k 149 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQ 149 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEE
Confidence 456789999999999999996 5689999999999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.4e-17 Score=175.44 Aligned_cols=139 Identities=12% Similarity=0.157 Sum_probs=117.8
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
.-++|++.+.||+|+||.||++.+.. ++..+|+|.+..... ......+.+|+.+++.++ ||||+++++.+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMKEFN-CHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 34679999999999999999998642 356899998754321 123456889999999985 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc--C----------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH--T----------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~--~----------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....|++|||+++++|.+++. . .++...+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence 999999999999999999986 1 246678889999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-17 Score=175.29 Aligned_cols=131 Identities=11% Similarity=0.132 Sum_probs=113.5
Q ss_pred EecCCCeEEEEEEEECCCCc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRDSEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+..++. .+++|.++... .......+.+|+.++.++.+||||+++++.+......|++|||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 58999999999999988776 46888775322 223445788999999999779999999999999999999999999
Q ss_pred CCcHHHHHc-C-----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH-T-----------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~-~-----------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. . .+++..+..++.|++.||+|||++|++||||||+|||++.++.+|
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEE
Confidence 999999986 1 368899999999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.72 E-value=5e-17 Score=178.68 Aligned_cols=139 Identities=19% Similarity=0.224 Sum_probs=120.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--Ce
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MH 844 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~ 844 (908)
++++|++.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++.++ |++++++++.+... +.
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDS 82 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCe
Confidence 578999999999999999999999999999999998654322 222335668999999995 99999999988654 56
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||+. ++|.+++. ..+++..+..++.|++.||.|||++|++||||||+||+++.+|.+|
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~k 148 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLK 148 (309)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 899999996 47888776 5689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-17 Score=173.54 Aligned_cols=134 Identities=10% Similarity=0.132 Sum_probs=117.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+++++|++.+.||+|+||.||++.. +++.+|+|.++... ....+.+|+.+++.++ ||+++++++.+... ..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~-~~ 73 (254)
T cd05083 3 LNLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLH-HKNLVRLLGVILHN-GL 73 (254)
T ss_pred ccHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCC-CCCcCeEEEEEcCC-Cc
Confidence 3578899999999999999999864 67889999875432 2357889999999995 99999999988654 57
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.+|.+|
T Consensus 74 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~k 140 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAK 140 (254)
T ss_pred EEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEE
Confidence 99999999999999997 3478999999999999999999999999999999999999888664
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.5e-17 Score=178.91 Aligned_cols=133 Identities=18% Similarity=0.142 Sum_probs=104.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-CCceEEEeeechhhh--hccchHHHHHHHHHHHHhcCCCCccc-eeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-SENFLSLKRFSKQKV--KCLGKEVQVLKEKNLMKSVSPSACVP-QILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-~~~~~alK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~~i~-~~~~~~~~ 841 (908)
.-..+|.+.+.||+|+||.||+|+++. +++.+|+|++..... ........+.+|+.+|+.++ |++++ .++..
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc---
Confidence 346789999999999999999999876 677789998653211 12224566899999999996 77766 45442
Q ss_pred CCeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCC-CCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGV-SPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDI-Kp~NILi~~~g~vK 908 (908)
...|+||||++|++|.. +. ... ...++.|++.||.|||++||+|||| ||+|||++.+|.+|
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~-~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ik 152 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR-PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAA 152 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC-ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEE
Confidence 45799999999999973 22 111 1467899999999999999999999 99999999888664
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-17 Score=176.41 Aligned_cols=137 Identities=14% Similarity=0.234 Sum_probs=123.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|+||.||++.+..+++.+|+|.+.... .......+.+|+.+++.+. |||++++++.+.+...+|++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEE
Confidence 46888999999999999999999999999999986543 1234456788999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||+++++|.+++. ..+++..+..++.|++.||.|||+++++||||+|+||+++++|.++
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~ 138 (274)
T cd06609 78 MEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVK 138 (274)
T ss_pred EEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence 99999999999998 6899999999999999999999999999999999999999988653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.4e-17 Score=178.87 Aligned_cols=137 Identities=15% Similarity=0.201 Sum_probs=118.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECC--CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--CeE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRD--SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MHA 845 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~--~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~~ 845 (908)
.|++.+.||+|+||.||++.+.. +++.||+|.+.............+.+|+.++..++ ||+|+++++.+.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK-HENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceE
Confidence 48899999999999999999988 88999999987644333334567788999999995 99999999999888 889
Q ss_pred EEEEecCCCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC----CCccC
Q 002560 846 GLLLNTYLACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK----SGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~----~g~vK 908 (908)
|+||||+++ +|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++. +|.+|
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEE
Confidence 999999965 6776664 26899999999999999999999999999999999999998 66654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.7e-17 Score=172.78 Aligned_cols=135 Identities=13% Similarity=0.186 Sum_probs=123.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.++|++.+.||.|+||.||++.+..+++.+++|.+..... ...+.+|+.+++.+ +||+|+++++.+.+..+.|+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l 75 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWI 75 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEE
Confidence 4679999999999999999999998899999999865432 56788999999999 59999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||+.||+||||+|+||+++.+|.+|
T Consensus 76 ~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~ 139 (256)
T cd06612 76 VMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAK 139 (256)
T ss_pred EEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEE
Confidence 999999999999986 5689999999999999999999999999999999999999988764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.4e-17 Score=176.46 Aligned_cols=139 Identities=20% Similarity=0.313 Sum_probs=122.3
Q ss_pred ceEEEEEecCCCeEEEEEEEEC---CCCceEEEeeechhhhhc-cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKC-LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~~-~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+|++.+.||+|+||.||+++.. .+++.+|+|++.+..... ......+.+|+.++..+.+||+|+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 5889999999999999999864 456899999987654322 334567889999999997799999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||||+.+++|.+++. ..+++..++.++.|++.||.|||++|++||||||.||+++.++.+|
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~ 145 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVV 145 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence 99999999999999987 6689999999999999999999999999999999999999887653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-17 Score=179.75 Aligned_cols=140 Identities=9% Similarity=0.102 Sum_probs=120.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+.+.+|++.+.||.|+||.||++.+..+ +..+|+|+++... .......+..|..++..+. ||+|+++++.+.
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~ 78 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQ-HPNIVCLLGVVT 78 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEc
Confidence 4677899999999999999999987543 5789999987432 1223456888999999985 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 841 DSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
.....++++||+.+++|.+++. ..++...+..++.|++.||.|||++||+||||||+|||++
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 9999999999999999999984 2378888999999999999999999999999999999999
Q ss_pred CCCccC
Q 002560 903 KSGHLQ 908 (908)
Q Consensus 903 ~~g~vK 908 (908)
+++.+|
T Consensus 159 ~~~~~k 164 (283)
T cd05091 159 DKLNVK 164 (283)
T ss_pred CCCceE
Confidence 887664
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.9e-17 Score=172.25 Aligned_cols=136 Identities=12% Similarity=0.150 Sum_probs=120.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
...+|++.+.||.|+||.||++.+. .+..+|+|.+..... ....+.+|+.+++.+. ||+++++++.+......|
T Consensus 2 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05112 2 HPSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLS-HPKLVQLYGVCTERSPIC 75 (256)
T ss_pred ChhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCC-CCCeeeEEEEEccCCceE
Confidence 4568999999999999999999875 467899998765432 2346788999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. +.+++..+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~ 140 (256)
T cd05112 76 LVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVK 140 (256)
T ss_pred EEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEE
Confidence 9999999999999986 4589999999999999999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.3e-17 Score=174.89 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=119.7
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||++.+.. ++..+++|.+.... .......+.+|..+++.++ |++|+++++.+.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~ 79 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFN-HQNIVRLIGVSF 79 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEc
Confidence 345789999999999999999999977 67899999875432 1223456888999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc--C-------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 841 DSMHAGLLLNTYLACPLASILH--T-------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~--~-------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
+....|++|||+++++|.+++. + .+++..+..++.||+.||.|||+++++||||||+|||++.+|
T Consensus 80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG 153 (277)
T ss_pred cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC
Confidence 9999999999999999999986 1 488999999999999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=179.75 Aligned_cols=136 Identities=15% Similarity=0.227 Sum_probs=120.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|.....||.|+||.||++.+..++..+|+|.+.... ......+.+|+.+++.++ |||++++++.+...++.|++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~lv 97 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDELWVV 97 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCC-CCcHHHHHHheecCCeEEEE
Confidence 34555678999999999999999999999999876433 223456889999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..+..++.||+.||.|||++||+||||||+||++++++.+|
T Consensus 98 ~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~k 158 (292)
T cd06658 98 MEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIK 158 (292)
T ss_pred EeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEE
Confidence 99999999999987 7799999999999999999999999999999999999999888764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-17 Score=176.60 Aligned_cols=136 Identities=13% Similarity=0.159 Sum_probs=120.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++++.||.|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||||+++++++.+....|++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEe
Confidence 58999999999999999999999999999998865432 2223457889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+. ++|..++. ..+++..+..++.|++.||.|||++|++||||+|+||+++.+|.+|
T Consensus 79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~ 140 (284)
T cd07860 79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 140 (284)
T ss_pred eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 9995 68888885 4689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5e-17 Score=174.74 Aligned_cols=132 Identities=14% Similarity=0.225 Sum_probs=112.3
Q ss_pred ccceEEEEEe--cCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 768 LTDMEWRKCL--YSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 768 ~~~~~~~~~L--G~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
.++|++.+.+ |+|+||.||++.++.++..+|+|.+.+..... .|......+.+||+++++++.+...+..
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 3567776666 99999999999999999999999987643211 1222233233699999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC-cc
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HL 907 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g-~v 907 (908)
|+||||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++ .+
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~ 149 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRI 149 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeE
Confidence 99999999999999997 5799999999999999999999999999999999999999887 54
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.8e-17 Score=174.02 Aligned_cols=136 Identities=13% Similarity=0.126 Sum_probs=117.8
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++... .+..+|+|.+..... ....+.+|+.+++.++ |+++++++..+. ....
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~ 75 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLR-HDKLVQLYAVVS-EEPI 75 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcC-CCceEEEEeEEC-CCCc
Confidence 34678999999999999999999875 556799998875432 2346889999999995 999999998875 4568
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~ 142 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCK 142 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEE
Confidence 99999999999999986 3589999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.3e-17 Score=180.60 Aligned_cols=138 Identities=16% Similarity=0.202 Sum_probs=120.0
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM---- 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~---- 843 (908)
.++|++.+.||+|+||.||++.+..++..||+|.+.+.. ........+.+|+.+++.++ ||||+++++.+....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMK-HENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCccceeeeecCCccccc
Confidence 356999999999999999999999999999999886532 22223456789999999995 999999999887653
Q ss_pred --eEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 --HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 --~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|+|+ +++|..++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELK 158 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 458999998 789998887 7899999999999999999999999999999999999999888764
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.9e-17 Score=181.11 Aligned_cols=138 Identities=15% Similarity=0.219 Sum_probs=119.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
.+.|++.+.||+|+||.||++.+..+++.+|+|.+.+.. ........+.+|+.+++.++ ||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcC-CCCCcceeeeeccCCCccc
Confidence 477999999999999999999999999999999986532 22234456778999999995 99999999887543
Q ss_pred -CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 -MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 -~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+.|+||||+. ++|.+.+...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~k 158 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 158 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEE
Confidence 35799999995 588888875699999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-17 Score=174.80 Aligned_cols=136 Identities=17% Similarity=0.150 Sum_probs=115.1
Q ss_pred eEEEEEecCCCeEEEEEEEECC---CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC----
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRD---SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM---- 843 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~---~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~---- 843 (908)
|++.+.||+|+||.||++.... ++..+|+|.+..... .......+.+|+.+++.+. ||+|+++++.+....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEeeeccCCcccc
Confidence 5778999999999999998764 347899998865332 2234567899999999985 999999998775544
Q ss_pred --eEEEEEecCCCCcHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 --HAGLLLNTYLACPLASILH--------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 --~~~iv~e~~~gg~L~~~l~--------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+++|||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+||++++++.+|
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~k 153 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVC 153 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEE
Confidence 3799999999999998884 2589999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.2e-17 Score=176.51 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=123.3
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
..+|++.+.||+|+||.||++.+..+++.+++|.+.... ....+.+.+|+.+++.+. |||++++++.+......|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEE
Confidence 478999999999999999999998899999999875432 223467889999999985 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 94 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~k 155 (293)
T cd06647 94 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVK 155 (293)
T ss_pred EEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEE
Confidence 999999999999998 6789999999999999999999999999999999999999887653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.71 E-value=5e-17 Score=176.04 Aligned_cols=139 Identities=9% Similarity=0.109 Sum_probs=120.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+...+|.+.+.||+|+||.||++... .++..+|+|.+.... ......+.+|+.+++.+. |+||+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~ 77 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQ-HQHIVRFYGVCT 77 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCC-CCCCceEEEEEe
Confidence 45678999999999999999999753 345688999876432 233557889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc--C---------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 841 DSMHAGLLLNTYLACPLASILH--T---------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~--~---------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
+....|++|||+++++|.+++. + .+++..+..++.|++.||.|||++||+||||||+|||+++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~ 157 (280)
T cd05092 78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ 157 (280)
T ss_pred cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC
Confidence 9999999999999999999986 1 3788999999999999999999999999999999999998
Q ss_pred CCccC
Q 002560 904 SGHLQ 908 (908)
Q Consensus 904 ~g~vK 908 (908)
++.+|
T Consensus 158 ~~~~k 162 (280)
T cd05092 158 GLVVK 162 (280)
T ss_pred CCCEE
Confidence 88664
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-17 Score=176.99 Aligned_cols=128 Identities=14% Similarity=0.093 Sum_probs=110.2
Q ss_pred EEecCCCeEEEEEEEECCCCc-------eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 775 KCLYSTDCSEIGLVLLRDSEN-------FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~-------~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+.||.|+||.||++.+...+. .+++|.+.... ....+.+..|..+++.+. |||++++++.+......++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLS-HKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCC-CCChhheeeEEEeCCCcEE
Confidence 368999999999998865543 47888765432 223456788999999985 9999999999999899999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
||||+++++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~ 138 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREED 138 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccc
Confidence 999999999999997 35899999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.2e-17 Score=176.05 Aligned_cols=126 Identities=17% Similarity=0.138 Sum_probs=107.7
Q ss_pred EecCCCeEEEEEEEECCC------------------------CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCc
Q 002560 776 CLYSTDCSEIGLVLLRDS------------------------ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC 831 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~------------------------~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~ 831 (908)
.||+|+||.||++....+ ...+++|++..... .....+..|..+++.++ |||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~l~-h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR---DIALAFFETASLMSQVS-HIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH---HHHHHHHHHHHHHhcCC-CCC
Confidence 599999999999875321 23588888765431 23456788899999985 999
Q ss_pred cceeeeeeccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 832 VPQILCTCADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 832 i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
|+++++++.+....|+||||+++++|..++. +.+++..+..++.|++.||.|||++||+||||||+|||++..|
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLG 154 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccC
Confidence 9999999999999999999999999999985 5689999999999999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.7e-17 Score=173.58 Aligned_cols=137 Identities=12% Similarity=0.175 Sum_probs=121.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM---- 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~---- 843 (908)
.++|++.+.||.|+||.||++.++.+++.+++|++..... ....+.+|+.+++.+..|++|+++++.+.+..
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 4789999999999999999999998999999999875432 34568899999999866999999999986544
Q ss_pred --eEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 --HAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 --~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|++|||+++++|.+++. ..+++..++.++.|++.||.|||++|++|+||+|+||+++.+|.+|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~ 153 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVK 153 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEE
Confidence 5899999999999999875 3689999999999999999999999999999999999999988764
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.2e-17 Score=180.80 Aligned_cols=136 Identities=13% Similarity=0.155 Sum_probs=118.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----C
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS-----M 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~-----~ 843 (908)
++|++.+.||+|+||.||++.+..+++.||+|.++... .......+.+|+.+++.++ ||||+++++++... .
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFESFN 81 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccccc
Confidence 57999999999999999999999999999999986422 2234456788999999996 99999999876543 4
Q ss_pred eEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|++|||+. ++|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~k 146 (336)
T cd07849 82 DVYIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLK 146 (336)
T ss_pred eEEEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEE
Confidence 6899999996 58888887 7899999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-17 Score=176.57 Aligned_cols=139 Identities=14% Similarity=0.180 Sum_probs=120.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..++|++.+.||+|+||.||++.+.. ++..+|+|++..... ......+.+|+.+++.+. ||+|+++++.+.+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l~-h~~iv~~~~~~~~ 79 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFD-HPNIVKLLGVCAV 79 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhcC-CCchheEEEEEcC
Confidence 46789999999999999999998753 577999998865431 223456888999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc-C-----------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCC
Q 002560 842 SMHAGLLLNTYLACPLASILH-T-----------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPD 897 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~-~-----------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~ 897 (908)
....|++|||+++++|.+++. . .+++..+..++.|++.||.|||++|++||||||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ 159 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR 159 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence 999999999999999999986 1 3677888999999999999999999999999999
Q ss_pred cEEEcCCCccC
Q 002560 898 VLMLDKSGHLQ 908 (908)
Q Consensus 898 NILi~~~g~vK 908 (908)
|||++.+|.+|
T Consensus 160 nil~~~~~~~~ 170 (288)
T cd05050 160 NCLVGENMVVK 170 (288)
T ss_pred heEecCCCceE
Confidence 99999888664
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.4e-17 Score=175.70 Aligned_cols=138 Identities=12% Similarity=0.146 Sum_probs=122.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ |++|+++++.+.+.+..|++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEE
Confidence 469999999999999999999999999999998865432 2334567889999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++++.+..++. ..+++..+..++.|++.||.|||++|++||||+|+||+++++|.+|
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~k 140 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLK 140 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEE
Confidence 99999877776665 5689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.5e-17 Score=175.48 Aligned_cols=137 Identities=18% Similarity=0.276 Sum_probs=123.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|+||.||++.++.+++.+++|.+..... ......+.+|+.+++.+. ||||+++++.+......|++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 77 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISIC 77 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEE
Confidence 468888999999999999999999999999999876532 234567889999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.+|.+|
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~ 141 (265)
T cd06605 78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIK 141 (265)
T ss_pred EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEE
Confidence 99999999999997 578999999999999999999999 9999999999999999988654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.7e-17 Score=177.04 Aligned_cols=138 Identities=14% Similarity=0.157 Sum_probs=121.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|++.+.||+|+||.||++.+..+++.+|+|.+.............+.+|+.+++.++ |||++++++.+.+.+..|+|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEEeCCeEEEE
Confidence 45889999999999999999999999999999986544333444567889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+. ++|.+++. +.+++..+..++.|++.||.|||++||+||||+|+||+++.+|.+|
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~k 155 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVK 155 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEE
Confidence 99997 56666664 6789999999999999999999999999999999999999988764
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.6e-17 Score=174.70 Aligned_cols=138 Identities=12% Similarity=0.161 Sum_probs=120.6
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec------
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA------ 840 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~------ 840 (908)
....|++.+.||.|+||.||++.+..+++.+|+|++.... .....+..|+.++..+.+|+|++++++.+.
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 3468999999999999999999999999999999876542 233567789999999867999999999874
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.....|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 3568899999999999999986 4588999999999999999999999999999999999999888653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-16 Score=170.99 Aligned_cols=136 Identities=11% Similarity=0.108 Sum_probs=118.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++.+. .+..+|+|.+.... .....+.+|+.+++.+. |++++++++.+.. ...
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EPI 75 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CCe
Confidence 45688999999999999999999865 45679999876432 23457888999999995 9999999999887 788
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..++...+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~ 142 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK 142 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEE
Confidence 99999999999999996 3478888999999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-16 Score=169.78 Aligned_cols=137 Identities=18% Similarity=0.259 Sum_probs=124.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|++|.||++.+..+++.+++|.+...... ......+.+|+.++..+. ||+++++++.+.+....|++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEE
Confidence 588999999999999999999989999999998765432 234567899999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~ 139 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVK 139 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEE
Confidence 9999999999987 6799999999999999999999999999999999999999887654
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-16 Score=173.98 Aligned_cols=135 Identities=13% Similarity=0.139 Sum_probs=117.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|++.+.||+|++|.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||+++++++++.+..+.|+
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 78 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKRLYL 78 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhcc-CCCEeeEEEEEecCCeEEE
Confidence 4689999999999999999999999999999998865432 2234456788999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 848 LLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 848 v~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||||++ ++|.+++. ..+++..+..++.||+.||.|||++||+||||||+||+++.++
T Consensus 79 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~ 139 (294)
T PLN00009 79 VFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT 139 (294)
T ss_pred EEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC
Confidence 999996 57877775 2368888999999999999999999999999999999998643
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-16 Score=171.29 Aligned_cols=135 Identities=10% Similarity=0.067 Sum_probs=115.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|++...||+|+||.||++.+..+ ..+|+|.+..... ..+.+.+|+.+++.+. ||+++++++.+. .+..|
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLR-HDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCC-CCCeeeEEEEEc-CCCcE
Confidence 456799999999999999999988655 4689998764331 2356788999999995 999999998875 45689
Q ss_pred EEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+.+++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~ 142 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCK 142 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEE
Confidence 9999999999999996 3478999999999999999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.4e-17 Score=178.20 Aligned_cols=136 Identities=10% Similarity=0.154 Sum_probs=121.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
-|+..+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.+++.+. ||+|+++++.+...+..|+||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCC-CCccHhhhcccccCCceEEEE
Confidence 36667789999999999999998999999998864432 223467889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. +.+++..++.++.|++.||.|||++|++|+||+|+||+++++|.+|
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~ 141 (277)
T cd06642 82 EYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVK 141 (277)
T ss_pred EccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEE
Confidence 9999999999988 7799999999999999999999999999999999999999888654
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.2e-17 Score=171.51 Aligned_cols=130 Identities=13% Similarity=0.201 Sum_probs=113.5
Q ss_pred EEecCCCeEEEEEEEECCCC---ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 775 KCLYSTDCSEIGLVLLRDSE---NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~---~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+.||+|+||.||++.+..++ ..+|+|.+...... .....+.+|+.+++.+. ||+++++++++. ....+++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLD-HPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcC-CCCeeeEEEEEc-CCceEEEEEe
Confidence 46999999999999876554 78999998765533 34567889999999995 999999999876 4568999999
Q ss_pred CCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~k 135 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAK 135 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEE
Confidence 99999999997 5699999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.8e-17 Score=171.67 Aligned_cols=137 Identities=15% Similarity=0.197 Sum_probs=120.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec--cCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA--DSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~--~~~~~~i 847 (908)
+|++.+.||.|+||.||++.+..++..+|+|.+..... .......+..|+.+++.++ ||+++++++.+. .....|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEE
Confidence 58999999999999999999999999999999865443 2334567888999999995 999999998764 4467899
Q ss_pred EEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH-----hCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLH-----KRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH-----~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.+|.+|
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~k 150 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVK 150 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEE
Confidence 999999999999985 46899999999999999999999 99999999999999999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.4e-17 Score=173.72 Aligned_cols=135 Identities=16% Similarity=0.129 Sum_probs=112.8
Q ss_pred EEEEEecCCCeEEEEEEEECCCCc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc------CC
Q 002560 772 EWRKCLYSTDCSEIGLVLLRDSEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD------SM 843 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~~~~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~------~~ 843 (908)
.+.+.||+|+||.||++++..++. .+|+|.++... ......+.+.+|..+++.++ ||||+++++.+.. ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCCC
Confidence 467889999999999999877765 68999876542 22334567889999999995 9999999986532 23
Q ss_pred eEEEEEecCCCCcHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 152 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVC 152 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEE
Confidence 5789999999999998873 3478999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-16 Score=171.82 Aligned_cols=135 Identities=16% Similarity=0.201 Sum_probs=116.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+++.....||+|+||.||++.+..++..+++|.+.... ......+.+|+.+++.++ |+||+++++.+......|++
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEE
Confidence 33444568999999999999999899999999876543 224557889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCC--CHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCcc
Q 002560 849 LNTYLACPLASILH---TPL--DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHL 907 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l--~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~v 907 (908)
|||+++++|.+++. ..+ ++..+..++.|++.||.|||++||+||||||+|||++. ++.+
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~ 148 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVV 148 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeE
Confidence 99999999999987 345 88889999999999999999999999999999999986 4443
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-16 Score=173.24 Aligned_cols=137 Identities=20% Similarity=0.267 Sum_probs=119.7
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCeEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMHAG 846 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~~~ 846 (908)
++|+..+.||.|++|.||+|.+..+++.+|+|.+..... ......+.+|+.+++.++ ||||+++++.+.+ ...+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEE
Confidence 468999999999999999999999999999999875432 234567889999999995 9999999998754 45789
Q ss_pred EEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+|
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~ 145 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVK 145 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEE
Confidence 9999999999988764 4588999999999999999999999999999999999999887653
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.7e-17 Score=171.34 Aligned_cols=130 Identities=11% Similarity=0.178 Sum_probs=116.1
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||.|+||.||++.+.. ++.+|+|.+...... .....+.+|+.+++.+. ||+|+++++++.+....|++|||+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 368999999999999887 999999988754432 24567889999999995 99999999999999999999999999
Q ss_pred CcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. ..++...+..++.+++.||.|||++|++||||||+|||++.++.+|
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~ 133 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLK 133 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEE
Confidence 99999996 4578999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.7e-17 Score=191.08 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=109.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCc-eEEEe--------------eechhhhhccchHHHHHHHHHHHHhcCCCCc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSEN-FLSLK--------------RFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC 831 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~-~~alK--------------~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~ 831 (908)
.+++|++++.||+|+||.||+|..+.... ..+.| .+.+...........+.+|+.+|+.++ |||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-HEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-CCC
Confidence 35789999999999999999997654322 22222 111111112223456789999999995 999
Q ss_pred cceeeeeeccCCeEEEEEecCCCCcHHHHHc-C------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 832 VPQILCTCADSMHAGLLLNTYLACPLASILH-T------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 832 i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~-~------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
|+++++++.+.+..|++|+++. ++|..++. . ......++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD 303 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 9999999999999999999994 57777764 2 23456788899999999999999999999999999999999
Q ss_pred CccC
Q 002560 905 GHLQ 908 (908)
Q Consensus 905 g~vK 908 (908)
|.+|
T Consensus 304 ~~vk 307 (501)
T PHA03210 304 GKIV 307 (501)
T ss_pred CCEE
Confidence 8765
|
|
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.71 E-value=7e-17 Score=175.82 Aligned_cols=136 Identities=14% Similarity=0.143 Sum_probs=116.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
+|++.+.||+|+||.||++.+.. ....+++|.+..... ......+.+|+.+++.++ ||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVN-HPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCC
Confidence 57889999999999999998753 235788888764332 223467889999999995 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCc
Q 002560 845 AGLLLNTYLACPLASILH--------------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--------------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~N 898 (908)
.|++|||+.+++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 999999999999999875 136788899999999999999999999999999999
Q ss_pred EEEcCCCccC
Q 002560 899 LMLDKSGHLQ 908 (908)
Q Consensus 899 ILi~~~g~vK 908 (908)
||+++++.+|
T Consensus 158 ill~~~~~~k 167 (290)
T cd05045 158 VLVAEGRKMK 167 (290)
T ss_pred EEEcCCCcEE
Confidence 9999888664
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.8e-17 Score=171.77 Aligned_cols=135 Identities=13% Similarity=0.179 Sum_probs=119.5
Q ss_pred eEEEEEecCCCeEEEEEEEECCCC----ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSE----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~----~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+++.+.||.|+||.||++.+...+ ..+|+|++...... .....+..|+.++..+ +|++|+++++.+.+.+..|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeE
Confidence 356789999999999999998766 89999998654321 2456888999999999 5999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CC--CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TP--LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~--l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. .. +++..+..++.|++.||.|||++|++||||||+||+++.+|.+|
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~ 143 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVK 143 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEE
Confidence 9999999999999997 22 99999999999999999999999999999999999999988653
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.2e-17 Score=171.47 Aligned_cols=131 Identities=17% Similarity=0.185 Sum_probs=117.2
Q ss_pred EEecCCCeEEEEEEEECCC---CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 775 KCLYSTDCSEIGLVLLRDS---ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~---~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+.||+|+||.||++.+... +..+++|.+....... ....+.+|+.++..++ |++++++++++.+....|++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 3689999999999999865 8899999987654322 4678899999999996 99999999999999999999999
Q ss_pred CCCCcHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH-----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~-----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~ 145 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVK 145 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEE
Confidence 99999999986 2479999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.70 E-value=8e-17 Score=172.03 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=112.2
Q ss_pred EecCCCeEEEEEEEE--CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLL--RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~--~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+ ..++..+|+|++.... ......+.+.+|+.+++.+. ||+|+++++.+. ....+++|||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLD-NPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCC-CCCcceEEEEEc-CCCcEEEEecCC
Confidence 589999999999965 4567899999886433 22334567889999999995 999999998875 456799999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. +.+++..+..++.|++.||.|||++||+||||||.|||++.++.+|
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~k 135 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAK 135 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEE
Confidence 999999997 6789999999999999999999999999999999999999888654
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=171.98 Aligned_cols=139 Identities=12% Similarity=0.174 Sum_probs=118.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC---CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS---ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~---~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
++-++|.+.+.||.|+||.||++.+... ...+++|....... ....+.+.+|+.+++.+. ||||+++++.+.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~- 78 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFD-HPHIVKLIGVITE- 78 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCC-CCchhceeEEEcC-
Confidence 3556799999999999999999987544 34789998754331 234567889999999995 9999999998876
Q ss_pred CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~ 147 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVK 147 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeE
Confidence 45789999999999999997 3589999999999999999999999999999999999999888664
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.1e-17 Score=176.53 Aligned_cols=140 Identities=14% Similarity=0.170 Sum_probs=118.7
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
.+..++|+..+.||+|+||.||++.+..++. .+|+|.+..... ......+.+|..+++.+. ||||+++++.+.
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~ 79 (303)
T cd05110 3 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASMD-HPHLVRLLGVCL 79 (303)
T ss_pred ccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCC-CCCcccEEEEEc
Confidence 4567889999999999999999999877776 468887754321 222346788999999994 999999999886
Q ss_pred cCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.. ..+++++|+++|+|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~k 149 (303)
T cd05110 80 SP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVK 149 (303)
T ss_pred CC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceE
Confidence 54 5679999999999999987 3689999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=171.03 Aligned_cols=129 Identities=11% Similarity=0.159 Sum_probs=110.4
Q ss_pred EecCCCeEEEEEEEEC--CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLR--DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~--~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+. ..+..+|+|++.... .....+.+.+|+.+++.+. ||+|+++++.+.. ...|+||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLD-NPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcC-CCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 3899999999998765 345579999886542 2234457889999999995 9999999998754 57899999999
Q ss_pred CCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~k 135 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAK 135 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEE
Confidence 999999986 5689999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=175.65 Aligned_cols=139 Identities=14% Similarity=0.200 Sum_probs=118.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS---- 842 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~---- 842 (908)
.+++|++.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||+|+++++.+...
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 87 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKATPY 87 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCC-CCCccceEEEEecccccc
Confidence 46789999999999999999999999999999998865432 1223345678999999995 99999999887554
Q ss_pred ----CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 ----MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ----~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+. ++|.+++. ..+++..++.++.|++.||.|||++|++|+||||+|||++.+|.+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~k 159 (310)
T cd07865 88 NRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILK 159 (310)
T ss_pred cCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEE
Confidence 34699999996 58888776 3689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.4e-17 Score=179.92 Aligned_cols=137 Identities=15% Similarity=0.212 Sum_probs=120.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec----cCCe
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA----DSMH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~----~~~~ 844 (908)
++|++.+.||.|+||.||++.++.+++.||+|.+..... .......+.+|+.+++.++ ||+|+++++.+. ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCce
Confidence 679999999999999999999999999999999875432 2234566788999999996 999999988775 3457
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+. ++|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~k 147 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELR 147 (334)
T ss_pred EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence 899999995 68999986 6799999999999999999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=171.25 Aligned_cols=134 Identities=18% Similarity=0.273 Sum_probs=114.8
Q ss_pred EEEEEecCCCeEEEEEEEEC----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 772 EWRKCLYSTDCSEIGLVLLR----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
++.+.||.|.||.||++.+. ..+..+++|.++... .......+.+|+.+++++ +||||+++++++......++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS--SEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS--SHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc--ccccceeeeecccccccc-cccccccccccccccccccc
Confidence 56789999999999999987 345689999985422 223467899999999999 59999999999998888999
Q ss_pred EEecCCCCcHHHHHc-C---CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-T---PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~---~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+++|+|.++|. . .++......++.||+.||.|||+++|+|+||+|.||+++.++.+|
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~K 143 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVK 143 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999998 3 689999999999999999999999999999999999999998775
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=185.83 Aligned_cols=134 Identities=13% Similarity=0.125 Sum_probs=110.4
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC-----CCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS-----PSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~-----~~~~i~~~~~~~~~ 841 (908)
..++|++.+.||+|+||.||+|.+..+++.||||+++... ........|+.+++.+. +++++++++.+|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3578999999999999999999999999999999986432 12233455666666653 34568888888865
Q ss_pred C-CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCC
Q 002560 842 S-MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 842 ~-~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g 905 (908)
. .++|+||+++ |++|.+++. +.+++..++.++.||+.||.|||+ .|||||||||+|||++.+|
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~ 269 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSD 269 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCC
Confidence 4 5789999988 778888886 679999999999999999999998 5999999999999998765
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=169.79 Aligned_cols=135 Identities=14% Similarity=0.167 Sum_probs=121.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||++.+..++..+|+|.+....... .....+.+|+.+++.++ |++|+++++.+.+....|+++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMK-HPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCC-CCChhhhhheeccCCeEEEEE
Confidence 5889999999999999999999999999999987654322 34457789999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||+++|+|+||||+||++++++.
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~ 139 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM 139 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC
Confidence 9999999999986 24799999999999999999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.1e-17 Score=177.53 Aligned_cols=136 Identities=18% Similarity=0.221 Sum_probs=120.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|.....||+|+||.||++.+..+++.+|+|.+..... .....+.+|+.++..+. ||+++++++.+...+..|++
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~iv 96 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEELWVL 96 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCC-CCchhhhhhheeeCCeEEEE
Confidence 345555679999999999999998999999999865332 23456888999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 97 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~k 157 (297)
T cd06659 97 MEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVK 157 (297)
T ss_pred EecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEE
Confidence 99999999999887 6799999999999999999999999999999999999999988764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-16 Score=172.80 Aligned_cols=134 Identities=17% Similarity=0.310 Sum_probs=115.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--CeEEEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MHAGLL 848 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~~~iv 848 (908)
|++.+.||+|+||.||++.+..+++.+|+|.+++... .. ......+|+.++.++.+|+|++++++.+.+. +.+|++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6789999999999999999999999999998865432 11 2234457888899887799999999999887 899999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+. ++|.+.+. ..+++..+..++.|++.||.|||++||+||||||+||+++. |.+|
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~k 139 (282)
T cd07831 79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILK 139 (282)
T ss_pred EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeE
Confidence 99997 47777776 46899999999999999999999999999999999999998 7654
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.9e-17 Score=172.56 Aligned_cols=131 Identities=15% Similarity=0.137 Sum_probs=111.1
Q ss_pred EEecCCCeEEEEEEEEC--CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 775 KCLYSTDCSEIGLVLLR--DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~--~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
+.||+|+||.||++... .++..+|+|.++.... ......+.+|+.+++.++ ||||+++++.+.+....|++|||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECC
Confidence 35899999999999764 3456899998765432 123346888999999995 999999999999999999999999
Q ss_pred CCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 853 LACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 853 ~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++++|.+++. ..++...+..++.|++.||.|||++|++||||||+|||++.++++|
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~k 140 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVK 140 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEE
Confidence 9999999986 1356778889999999999999999999999999999999887664
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-16 Score=182.71 Aligned_cols=219 Identities=22% Similarity=0.346 Sum_probs=175.8
Q ss_pred CCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhccCCCCCCcceEEEEEEEC---
Q 002560 128 QDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRG--- 204 (908)
Q Consensus 128 ~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~~--- 204 (908)
.....||++||-+ -.....++...+..++..+.....+-.+.|+.+|...|+++-..+.. -|..++.+.+..
T Consensus 549 ~~~a~~g~~dgs~--n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~rklg~~g~~---lg~~~~~~~i~~d~~ 623 (1081)
T KOG0618|consen 549 NPQATFGCFDGSR--NSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNRKLGEEGQV---LGGSVVLCQIVEDSL 623 (1081)
T ss_pred CCcceEEEEcCCC--chhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhhhhhhhhcc---ccchhhheeeccccc
Confidence 4557999999999 66888888888888887665433334455999999999999655433 355566666642
Q ss_pred -----CEEEEEEeccceEEEEEEcCCeeEEEeCCCCC-CCCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCC
Q 002560 205 -----RTIYVANSGDSRAVLAERRGKEIVAVDLSIDQ-TPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDD 278 (908)
Q Consensus 205 -----~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh-~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~ 278 (908)
.++++||||+|-++++++|+. .++|... -..+++|.+||...+|.|...+.+
T Consensus 624 ~~asS~~l~~Anvg~c~avls~ng~~----~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~------------------ 681 (1081)
T KOG0618|consen 624 SPASSKTLFAANVGTCMAVLSRNGKP----LPTTRSPMLEVDREEYKRIVDSKGFITEDNKL------------------ 681 (1081)
T ss_pred CcccchhhhHhhhccchhhhhhcCCc----CcccccccccCCHHHHHHHHHhcCeecCCCee------------------
Confidence 578999999999999998863 3344443 344899999999999988432211
Q ss_pred CCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEEEEcCccccccChHHHHHHHhccCCHHHHH
Q 002560 279 GDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDAC 358 (908)
Q Consensus 279 ~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v~~~~~~~~~a 358 (908)
+|+ ...||++|....-+ +|.+.|+|..+.|++.|+|||+|+-+||++|+-+++++.+++..+|-.||
T Consensus 682 ---------ngv---t~~tR~iG~~~l~P-~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AA 748 (1081)
T KOG0618|consen 682 ---------NGV---TSSTRAIGPFSLFP-HVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAA 748 (1081)
T ss_pred ---------ece---eeeeeecccccccc-cccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHH
Confidence 222 57899999775544 59999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCCC
Q 002560 359 AAIVAESYRLWLQYETRTDDITVIVVHINGLKN 391 (908)
Q Consensus 359 ~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~~~ 391 (908)
++|.+.|... |..||++|+||++.....
T Consensus 749 kKL~d~AqSY-----gc~~nv~vlVv~l~~~~~ 776 (1081)
T KOG0618|consen 749 KKLCDLAQSY-----GCAENVSVLVVRLNHLEE 776 (1081)
T ss_pred HHHHHHHHhc-----ccccCeeEEEEEeecchh
Confidence 9999999886 899999999999987755
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.4e-17 Score=177.57 Aligned_cols=122 Identities=13% Similarity=0.111 Sum_probs=103.5
Q ss_pred EEEecCCCeEEEEEEEEC--CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCeEEEEE
Q 002560 774 RKCLYSTDCSEIGLVLLR--DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMHAGLLL 849 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~--~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~~~iv~ 849 (908)
.+.||+|+||.||+|+++ .+++.+|+|.+.... ....+.+|+.+++.++ ||||+++++.+.. ...+|++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEE
Confidence 467999999999999976 367899999886432 2335678999999995 9999999998843 56789999
Q ss_pred ecCCCCcHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 850 NTYLACPLASILH-----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 850 e~~~gg~L~~~l~-----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
||+. ++|..++. ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~ 142 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEe
Confidence 9985 58888764 1489999999999999999999999999999999999994
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.6e-17 Score=165.18 Aligned_cols=129 Identities=16% Similarity=0.131 Sum_probs=97.4
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccch-----------------------HHHHHHHHHHHHhcCCCC
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGK-----------------------EVQVLKEKNLMKSVSPSA 830 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~-----------------------~~~~~~E~~il~~l~~~~ 830 (908)
.+.||+|+||.||+|.+. +|+.+|+|+++......... ......|..++..+. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 367999999999999987 89999999997643211110 123345889999984 55
Q ss_pred ccceeeeeeccCCeEEEEEecCCCCcHHHH-Hc-CCCCHHHHHHHHHHHHHHHHHH-HhCCcEecCCCCCcEEEcCCCcc
Q 002560 831 CVPQILCTCADSMHAGLLLNTYLACPLASI-LH-TPLDEQSARFCAASVVAALEDL-HKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 831 ~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~-l~-~~l~~~~~~~~~~qi~~aL~~L-H~~gIiHrDIKp~NILi~~~g~v 907 (908)
++...+.... . ..||||||++|+++... +. ..++...+..++.|++.+|.|| |++||+||||||+|||+++ |.+
T Consensus 80 ~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~-~~v 156 (190)
T cd05147 80 GIPCPEPILL-K-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD-GKL 156 (190)
T ss_pred CCCCCcEEEe-c-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC-CcE
Confidence 5533222221 2 23899999998877654 34 7899999999999999999999 7999999999999999984 544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-17 Score=157.90 Aligned_cols=139 Identities=16% Similarity=0.178 Sum_probs=120.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.-+++.-+..||+|+||.|-+.++..+|...|+|.+...- ..+...+.++|+.+..+...+|+++++|+.+.+...+|
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 3455666788999999999999999999999999986543 23355678899999888778999999999999999999
Q ss_pred EEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
|.||.| ..+|..+.. +.++|..+-.++..++.||.|||++ .+||||+||+||||+.+|++|
T Consensus 122 IcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVK 189 (282)
T KOG0984|consen 122 ICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVK 189 (282)
T ss_pred EeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEE
Confidence 999998 457766654 6799999999999999999999986 899999999999999999987
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.4e-17 Score=171.41 Aligned_cols=125 Identities=16% Similarity=0.174 Sum_probs=108.6
Q ss_pred EEecCCCeEEEEEEEECCCC----------ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 775 KCLYSTDCSEIGLVLLRDSE----------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~----------~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
+.||+|+||.||++.+..++ ..+++|.+..... ....+.+|..+++.++ ||+|+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLS-HKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCC-CcchhheeeEEec-CC
Confidence 36899999999999998766 3477777654331 1567888999999995 9999999998877 77
Q ss_pred EEEEEecCCCCcHHHHHc--C-CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 845 AGLLLNTYLACPLASILH--T-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~-~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
.|++|||+++++|.+++. . .++...+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~ 138 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYG 138 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCc
Confidence 899999999999999997 3 689999999999999999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-16 Score=175.91 Aligned_cols=138 Identities=12% Similarity=0.131 Sum_probs=120.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-CCeEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-SMHAG 846 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~-~~~~~ 846 (908)
-++|++.+.||.|+||.||++.+..+++.+|+|.+.+... .......+..|+.+++.++ |||+++++++|.. ....|
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLR-HENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcC-CCCeeeEeeeEecCCCcEE
Confidence 3579999999999999999999999999999998765432 2234567788999999995 9999999998865 56899
Q ss_pred EEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+ +++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 87 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~ 148 (328)
T cd07856 87 FVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLK 148 (328)
T ss_pred EEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEE
Confidence 999998 678999887 6789999999999999999999999999999999999999888654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=169.13 Aligned_cols=130 Identities=12% Similarity=0.180 Sum_probs=113.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++... ++..+|+|.+..... ......+.+|+.+++.+. ||||+++++.+......|++|||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP--QELKIKFLSEARILKQYD-HPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCC--HHHHHHHHHHHHHHHhCC-CCCcCeEEEEEecCCccEEEEECCCC
Confidence 36899999999999864 678999998765431 223446889999999994 99999999999999999999999999
Q ss_pred CcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~ 133 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLK 133 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEE
Confidence 99999986 4578999999999999999999999999999999999999888654
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=175.60 Aligned_cols=138 Identities=13% Similarity=0.178 Sum_probs=121.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|...+.||+|+||.||++.+..++..+|+|.+.............+.+|+.+++.+. |||++++++.+.+....|++
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEEEE
Confidence 45888999999999999999999999999999987654434445567889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+.| +|.+.+. ..+++..+..++.|++.||.|||++||+||||+|+||+++.+|.+|
T Consensus 104 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~k 165 (317)
T cd06635 104 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVK 165 (317)
T ss_pred EeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEE
Confidence 999975 7777764 6689999999999999999999999999999999999999888764
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-16 Score=169.25 Aligned_cols=131 Identities=27% Similarity=0.408 Sum_probs=120.2
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||.|+||.||++.+..+++.+++|++.+...........+..|+.+++.++ ||++++++..+.+....|++|||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 689999999999999889999999998776555556778899999999996 9999999999999999999999999999
Q ss_pred HHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.+|
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~ 133 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIK 133 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEE
Confidence 999997 5789999999999999999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=174.85 Aligned_cols=139 Identities=12% Similarity=0.208 Sum_probs=119.8
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC---
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM--- 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~--- 843 (908)
..++|++.+.||.|+||.||++.++.+++.+|+|.+..... .......+.+|+.+++.++ |||++++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLN-HRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCC-CCCeeeeeheecCcchhh
Confidence 46889999999999999999999999999999999865432 1223346778999999995 999999998886654
Q ss_pred -------eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 -------HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 -------~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|++|||+++ +|...+. ..+++..++.++.|++.||.|||++||+||||||+||++++++.+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEE
Confidence 89999999976 6777665 4689999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.4e-17 Score=181.22 Aligned_cols=137 Identities=10% Similarity=0.176 Sum_probs=120.0
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh-ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe--EEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK-CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH--AGL 847 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~--~~i 847 (908)
.++...||+|+|-+||++.+..+|-.||.-.++...+. .....+++..|+.+|+.|+ ||||+++|.+|.+... +-+
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~in~ 120 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKTINF 120 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCceeee
Confidence 44557899999999999999999999997766655543 3455689999999999995 9999999999987655 788
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC--cEecCCCCCcEEEcC-CCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~g--IiHrDIKp~NILi~~-~g~vK 908 (908)
|+|++.+|+|..|++ +.++...++.|++||+.||.|||++. |||||||.+||+|+. -|.||
T Consensus 121 iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VK 186 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVK 186 (632)
T ss_pred eeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCcee
Confidence 999999999999998 88999999999999999999999996 999999999999984 46554
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-16 Score=176.71 Aligned_cols=138 Identities=14% Similarity=0.186 Sum_probs=119.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
.++|++.+.||+|+||.||++.+..+++.||+|++.+... .......+.+|+.+++.++ ||||+++++.+...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEE 93 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcC-CCcccceeeeeeecccccc
Confidence 3779999999999999999999999999999999865321 2223456788999999995 99999999887543
Q ss_pred -CeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 -MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 -~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++++++ +++|.+++. ..+++..++.++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 94 ~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 94 FNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEE
Confidence 4578888887 789998887 6799999999999999999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-16 Score=172.09 Aligned_cols=135 Identities=13% Similarity=0.226 Sum_probs=120.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--CeEEEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MHAGLL 848 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~~~iv 848 (908)
|++.+.||.|+||.||++.+..+++.+|+|.+.... ........+.+|+.+++.+. ||+++++++.+.+. ...|++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEE
Confidence 678999999999999999999999999999998654 22334556888999999996 99999999999887 899999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++ +|..++. ..+++..+..++.|++.||.|||++|++|+||||+|||++++|.+|
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~ 140 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLK 140 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEE
Confidence 999974 8888886 3699999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=156.78 Aligned_cols=136 Identities=16% Similarity=0.210 Sum_probs=120.9
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
-+....|.+++.||+|+||.+|++....+|..||+|+-+... ...++..|..+...|++...|+.+..+..+..+
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY 85 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence 346788999999999999999999999999999999865433 234678899999999888899999999999999
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
-.+||+.+ |.+|.++++ ..|+..++..++-|++.-++|+|.+++|||||||+|+|..-+-+
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh 149 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRH 149 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccc
Confidence 99999988 889888887 88999999999999999999999999999999999999875443
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-16 Score=176.07 Aligned_cols=137 Identities=15% Similarity=0.151 Sum_probs=116.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECCC--CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec----cCC
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDS--ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA----DSM 843 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~--~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~----~~~ 843 (908)
+|++.+.||+|+||.||++.+..+ +..+|+|.+.... ........+.+|+.+++.+.+||||+++++.+. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488999999999999999999888 8899999886432 122234567889999999977999999987642 235
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|+|+. ++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~k 145 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELK 145 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEE
Confidence 6889999985 68999886 7799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.1e-17 Score=179.26 Aligned_cols=130 Identities=16% Similarity=0.264 Sum_probs=116.4
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
-+||+|+||+||.+++..+....|+|-+.... ....+-+..|+.+.+.|+ |.||+++++.+..++++-|.||-++|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPG 656 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCC
Confidence 36999999999999999999999999886433 334556788999999996 99999999999999999999999999
Q ss_pred CcHHHHHc---CCC--CHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCccC
Q 002560 855 CPLASILH---TPL--DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 855 g~L~~~l~---~~l--~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~vK 908 (908)
|+|.++|+ +++ ++.+.-+|.+||++||.|||++.|+|||||-+|+||+. .|.+|
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlK 716 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLK 716 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEE
Confidence 99999998 777 89999999999999999999999999999999999973 55543
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.6e-16 Score=170.96 Aligned_cols=135 Identities=14% Similarity=0.221 Sum_probs=120.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|...+.||+|++|.||++.+..+++.+++|.+.... ......+.+|+.+++.+. ||+++++++.+...++.|+++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHcC-CCChheEEEEEEcCCeEEEEE
Confidence 3555679999999999999999899999999875332 223456889999999985 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. .++++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 96 e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~ 155 (285)
T cd06648 96 EFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVK 155 (285)
T ss_pred eccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEE
Confidence 9999999999998 7799999999999999999999999999999999999999988764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-16 Score=171.24 Aligned_cols=130 Identities=12% Similarity=0.099 Sum_probs=108.6
Q ss_pred EecCCCeEEEEEEEECCC--CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRDS--ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~--~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++..... ...+++|.+..... ......+.+|..+++.++ ||||+++++.+.+....|++|||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS--SKEQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC--hHHHHHHHHHHHHHhccC-CcchhheEEEecCCCccEEEEecCC
Confidence 599999999999975433 23566776554321 223567899999999985 9999999999999999999999999
Q ss_pred CCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+|
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~ 139 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVK 139 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEE
Confidence 999999986 2356777889999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-16 Score=168.12 Aligned_cols=137 Identities=15% Similarity=0.146 Sum_probs=122.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||++.+..+++.+++|.+....... .....+..|+.+++.++ |++|+++++.+.+....|++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEe
Confidence 5889999999999999999999999999999987654332 34556788999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+|
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~k 143 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVK 143 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEE
Confidence 9999999999885 3589999999999999999999999999999999999999887654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.5e-16 Score=166.55 Aligned_cols=137 Identities=16% Similarity=0.221 Sum_probs=122.7
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||++.+..+++.+++|++..... .......+..|+++++.++ ||+++++++.+......+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEE
Confidence 58899999999999999999998999999999865442 2234567889999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.+++.||.|||++|++|+||+|+||+++.++.+|
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~ 143 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVK 143 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEE
Confidence 9999999999886 4589999999999999999999999999999999999999887653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-16 Score=169.41 Aligned_cols=130 Identities=12% Similarity=0.077 Sum_probs=114.3
Q ss_pred EEecCCCeEEEEEEEECC-CCc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 775 KCLYSTDCSEIGLVLLRD-SEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~-~~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+.||+|+||.||++.+.. .++ .+|+|.+...... .....+.+|+.++++++ ||||+++++.+.+ ...|++|||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEe
Confidence 368999999999998865 333 6899998776543 45678899999999995 9999999999888 899999999
Q ss_pred CCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~k 137 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVK 137 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEE
Confidence 99999999996 2589999999999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.8e-16 Score=166.29 Aligned_cols=137 Identities=16% Similarity=0.227 Sum_probs=123.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--CeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~~~i 847 (908)
+|++.+.||+|++|.||++.+..+++.+++|++...... ......+.+|+.++++++ ||+|+++++.+.+. ...|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEE
Confidence 488899999999999999999989999999998765432 335677889999999996 99999999999888 89999
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.+|.+|
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~ 141 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVK 141 (260)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEE
Confidence 999999999999997 5799999999999999999999999999999999999999887654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-16 Score=169.12 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=108.2
Q ss_pred EEecCCCeEEEEEEEECCC------------CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 775 KCLYSTDCSEIGLVLLRDS------------ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~------------~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
+.||+|+||.||++..... ...+++|.+.... ......+..|..++..++ ||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVS-HKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC
Confidence 3689999999999975322 2357888875533 223456788889999985 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
...+++|||+++++|..++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~ 143 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGI 143 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCc
Confidence 99999999999999998886 46899999999999999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.9e-16 Score=165.47 Aligned_cols=135 Identities=13% Similarity=0.222 Sum_probs=123.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|++|.||++.+..+++.+++|++..... .....+.+|+.+++.+. |++++++++.+......|+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEE
Confidence 58899999999999999999998999999999876442 34567889999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.+|.+|
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~ 138 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVK 138 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEE
Confidence 9999999999987 3789999999999999999999999999999999999999888654
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.4e-16 Score=172.42 Aligned_cols=136 Identities=13% Similarity=0.186 Sum_probs=119.9
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|...+.||+|+||.||++.+..+++.+++|.+.............+.+|+.+++.++ ||+++++++.+.+....|++||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEEEEe
Confidence 666788999999999999999999999999987654444445567889999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+. ++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 102 ~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~k 161 (313)
T cd06633 102 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVK 161 (313)
T ss_pred cCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEE
Confidence 996 57777775 5689999999999999999999999999999999999999888664
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-16 Score=175.76 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=118.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----C
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS-----M 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~-----~ 843 (908)
+.|++.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||||+++++.+... .
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLD-HENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcC-CCCccchHHheecccccccC
Confidence 469999999999999999999999999999999865432 2233456778999999995 99999999877543 3
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||+. ++|.+++. +.+++..+..++.|++.||.|||++|++||||||+|||++.+|.+|
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~k 148 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLK 148 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEE
Confidence 5899999995 68988886 6799999999999999999999999999999999999999888764
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-16 Score=167.66 Aligned_cols=120 Identities=22% Similarity=0.260 Sum_probs=104.9
Q ss_pred CCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCcHHH
Q 002560 780 TDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLAS 859 (908)
Q Consensus 780 G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~ 859 (908)
|.||.||+|+++.+++.||+|.+.+... ...|...+... .|||++++++.+.+....|++|||+++++|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~--------~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE--------YSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh--------hhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 8899999999999999999999876531 22333344443 48999999999999999999999999999999
Q ss_pred HHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 860 ILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 860 ~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~ 125 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQ 125 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEE
Confidence 987 5799999999999999999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-16 Score=170.81 Aligned_cols=136 Identities=15% Similarity=0.196 Sum_probs=123.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.+.|++.+.||+|+||.||++.+..++..+++|++..... ....+.+|+.+++.++ |+|++++++.+......|+
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCK-HPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCC-CCCeeEEEEEEEECCEEEE
Confidence 4568888999999999999999998899999999875432 4567889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--C-CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--T-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~-~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++||+++++|.+++. . .++...+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~ 156 (286)
T cd06614 93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVK 156 (286)
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEE
Confidence 999999999999998 3 799999999999999999999999999999999999999988764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.6e-16 Score=160.42 Aligned_cols=123 Identities=10% Similarity=0.081 Sum_probs=99.6
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC----CCCccceeeeeeccCC---eEE
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS----PSACVPQILCTCADSM---HAG 846 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~----~~~~i~~~~~~~~~~~---~~~ 846 (908)
.+.||+|+||.||. ++.++.. ++|++.... ....+.+.+|+.+++.+. .||||+++|+++.++. .+|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 46799999999995 7766665 689876532 223467899999999994 3899999999998874 444
Q ss_pred -EEEec--CCCCcHHHHHc-CCCCHHHHHHHHHHHHHHH-HHHHhCCcEecCCCCCcEEEcCC
Q 002560 847 -LLLNT--YLACPLASILH-TPLDEQSARFCAASVVAAL-EDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 847 -iv~e~--~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL-~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
+|||| +++++|.+++. +.+++. ..++.|++.++ +|||+++|+||||||+|||++..
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~ 141 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRI 141 (210)
T ss_pred EEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEecc
Confidence 78999 66799999998 556665 35688888888 99999999999999999999853
|
|
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-16 Score=172.60 Aligned_cols=139 Identities=14% Similarity=0.199 Sum_probs=118.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|+..+.||+|+||.||++.+..+++.+|+|.+.+.... .....+.+|+.++.++..||||+++++.+......|
T Consensus 2 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~ 79 (288)
T cd06616 2 TAEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCW 79 (288)
T ss_pred cHHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEE
Confidence 356788889999999999999999999999999998754322 345578899999999866999999999999999999
Q ss_pred EEEecCCCCcHHHHH---c----CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASIL---H----TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l---~----~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+. ++|.++. . ..+++..+..++.|++.||.|||+. ||+||||||+|||++.+|.+|
T Consensus 80 ~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~k 148 (288)
T cd06616 80 ICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIK 148 (288)
T ss_pred EEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEE
Confidence 9999985 4554432 1 5689999999999999999999974 999999999999999888654
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-16 Score=173.05 Aligned_cols=132 Identities=16% Similarity=0.247 Sum_probs=118.1
Q ss_pred EEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 773 WRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 773 ~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
....||+|+||.||++....+++.+|+|.+.... ......+.+|+.+++.++ |++++++++.+...++.|++|||+
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 99 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFL 99 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEEecC
Confidence 3467999999999999999999999999875322 234556889999999995 999999999999999999999999
Q ss_pred CCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 853 LACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 853 ~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 100 ~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~ 156 (292)
T cd06657 100 EGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVK 156 (292)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 9999999887 6789999999999999999999999999999999999999988654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-16 Score=177.10 Aligned_cols=139 Identities=14% Similarity=0.212 Sum_probs=119.9
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCeE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMHA 845 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~~ 845 (908)
.++|++.+.||+|+||.||++.+..+++.+|+|.+.+... .......+.+|+.++..+.+||||+++++++.. ....
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 5679999999999999999999998999999998865322 222345677899999999559999999998754 3468
Q ss_pred EEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||||+. ++|..++. +.+++.....++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~k 147 (337)
T cd07852 85 YLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVK 147 (337)
T ss_pred EEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence 99999997 59999887 6789999999999999999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.9e-16 Score=175.22 Aligned_cols=132 Identities=15% Similarity=0.198 Sum_probs=115.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC------
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS------ 842 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~------ 842 (908)
.+|++.+.||.|+||.||++.+..+++.+|+|.+..... .....+.+|+.+++.++ ||+|+++++.+...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcC-CCcchhhHhhhccccccccc
Confidence 679999999999999999999999999999998865432 34567889999999995 99999998766543
Q ss_pred --------CeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 843 --------MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 843 --------~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
...|++|||+. ++|.+++. ..+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~ 151 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED 151 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC
Confidence 46899999996 58988887 7799999999999999999999999999999999999998543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.67 E-value=3e-16 Score=170.08 Aligned_cols=135 Identities=15% Similarity=0.177 Sum_probs=119.4
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||.|++|.||++.+..++..+|+|++..... .......+.+|+.+++.++ ||+++++++.+.+....|++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEe
Confidence 6788999999999999999999999999999875432 2233456788999999996 9999999999999999999999
Q ss_pred cCCCCcHHHHHc--C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH--T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~--~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+. ++|.+++. . .+++..+..++.|++.||.|||+++++||||+|+||+++.+|.+|
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~ 139 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALK 139 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEE
Confidence 995 68999886 3 589999999999999999999999999999999999999888664
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-16 Score=172.28 Aligned_cols=139 Identities=17% Similarity=0.231 Sum_probs=117.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD----- 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~----- 841 (908)
.+++|++.+.||.|+||.||++.+..+++.+|+|.+....... .....+.+|+.+++.++ ||+|+++++.+.+
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 83 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLK-HPNVVPLIDMAVERPDKS 83 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcC-CCCccchhhheecccccc
Confidence 3789999999999999999999999999999999886543221 22345678999999995 9999999987643
Q ss_pred ---CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 ---SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ---~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+|++|+|+.+ +|...+. ..+++..+..++.|++.||.|||++||+||||||+|||++++|.+|
T Consensus 84 ~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~ 155 (311)
T cd07866 84 KRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILK 155 (311)
T ss_pred cccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 3457999999964 6776665 4799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.2e-16 Score=170.21 Aligned_cols=141 Identities=18% Similarity=0.288 Sum_probs=120.7
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+.+++|++.+.||+|+||.||++.+..+++.+|+|.+.+.... .....+..|..++.....||+|+++++++.+...
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD 88 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence 55789999999999999999999999988999999998754321 2344566777777776569999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++|||+. ++|..++. ..+++..+..++.|++.||.|||+ +||+||||+|+||+++.++.+|
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~k 155 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVK 155 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEE
Confidence 999999985 46766664 668999999999999999999997 6999999999999999888764
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.3e-16 Score=177.80 Aligned_cols=136 Identities=13% Similarity=0.169 Sum_probs=123.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec-----cCC
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA-----DSM 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~-----~~~ 843 (908)
+-|++.+.||.|.+|.||+++++.+++..|+|++.... ...+.+..|.+||+.+++|||++.+|++|. .++
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 55999999999999999999999999999999976543 234567789999999999999999999874 356
Q ss_pred eEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+|||||.||+..++++ ..+.|..+.+|+..++.||.+||.+.+||||||-.|||++.+|.||
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEE
Confidence 8999999999999999998 6799999999999999999999999999999999999999999886
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-16 Score=174.58 Aligned_cols=137 Identities=12% Similarity=0.175 Sum_probs=117.9
Q ss_pred ceE-EEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccc-----------hHHHHHHHHHHHHhcCCCCccceeee
Q 002560 770 DME-WRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLG-----------KEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 770 ~~~-~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~-----------~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
.|. +.+.||.|+||.||++.+..+++.+|+|.+......... ....+.+|+.+++.++ ||||+++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~ 87 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMGLVD 87 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-CcceeeeeE
Confidence 354 457799999999999999999999999998654322210 1124778999999995 999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 838 TCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++......|++|||+. ++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEE
Confidence 9999999999999996 68999887 6789999999999999999999999999999999999999988764
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-16 Score=175.01 Aligned_cols=138 Identities=14% Similarity=0.208 Sum_probs=120.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe---
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH--- 844 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~--- 844 (908)
-++|++.+.||+|+||.||++.+..+++.+|+|++.... ........+.+|+.+++.+ .||+++++++.+.....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccccc
Confidence 467999999999999999999999999999999886532 1223445678899999999 49999999887766554
Q ss_pred ---EEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 ---AGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ---~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|+++||+ +++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 158 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEE
Confidence 89999998 679999988 7899999999999999999999999999999999999999988664
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.2e-16 Score=171.23 Aligned_cols=121 Identities=15% Similarity=0.132 Sum_probs=102.4
Q ss_pred EEecCCCeEEEEEEEECC--CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec--cCCeEEEEEe
Q 002560 775 KCLYSTDCSEIGLVLLRD--SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA--DSMHAGLLLN 850 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~--~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~--~~~~~~iv~e 850 (908)
..||+|+||.||+|..+. ++..+|+|.+.... ....+.+|+.+++.++ ||||+++++.+. ....+|++||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEEe
Confidence 579999999999999754 56799999886532 2345778999999995 999999999874 4568899999
Q ss_pred cCCCCcHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 851 TYLACPLASILH-----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 851 ~~~gg~L~~~l~-----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
|+. ++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||+.
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~ 142 (317)
T cd07867 81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142 (317)
T ss_pred eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEc
Confidence 986 57777763 2478999999999999999999999999999999999993
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.4e-16 Score=166.78 Aligned_cols=140 Identities=19% Similarity=0.206 Sum_probs=119.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+.-++|++.+.||+|+||.||++.+.. ++..+++|.+.... .......+.+|..+++.+ .|||++++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~ 79 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGL-SHQNILPILHVCIE 79 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEec
Confidence 456789999999999999999999876 35788999876432 333466788999999999 59999999987554
Q ss_pred -CCeEEEEEecCCCCcHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 -SMHAGLLLNTYLACPLASILH----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 -~~~~~iv~e~~~gg~L~~~l~----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....+++++|+++++|..++. ..+++..+..++.|++.||.|||+++++||||||+|||++.++.+|
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~k 157 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVK 157 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEE
Confidence 577899999999999999986 1378999999999999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.3e-16 Score=173.88 Aligned_cols=136 Identities=15% Similarity=0.228 Sum_probs=120.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-----e
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM-----H 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~-----~ 844 (908)
+|++.+.||.|+||.||+|.+..+++.+|+|.+.+.. ........+.+|+.+++.++ ||+|+++++.+.+.. .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccc
Confidence 4899999999999999999999899999999887543 22334567889999999995 999999999887765 7
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|+|+. ++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~ 143 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLK 143 (330)
T ss_pred eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 999999997 58988887 5799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.1e-17 Score=160.24 Aligned_cols=139 Identities=17% Similarity=0.168 Sum_probs=121.7
Q ss_pred ccccccccc-ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee-e
Q 002560 761 SSLAKVSLT-DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC-T 838 (908)
Q Consensus 761 ~~~~~~~~~-~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~-~ 838 (908)
.++..+++. .|.+.+.||+|-||.+-+|+++.++..+++|.+.+... ....+.+|...--.|.+|.||+.-|+ .
T Consensus 15 ~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~va 90 (378)
T KOG1345|consen 15 EELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVA 90 (378)
T ss_pred ccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHH
Confidence 344455554 49999999999999999999999999999999877653 45678888887777788999988885 5
Q ss_pred eccCCeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 839 CADSMHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 839 ~~~~~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
|+..+...++|||++.|+|..-+. ..+-|...+.++.|++.||.|||+++++|||||.+||||-.
T Consensus 91 Fqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~ 156 (378)
T KOG1345|consen 91 FQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD 156 (378)
T ss_pred hhcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec
Confidence 888899999999999999999888 78999999999999999999999999999999999999964
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-16 Score=170.57 Aligned_cols=126 Identities=13% Similarity=0.180 Sum_probs=110.1
Q ss_pred CeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCcHHHH
Q 002560 781 DCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASI 860 (908)
Q Consensus 781 ~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~ 860 (908)
++|.||+++...+++.+|+|+++.... .......+.+|+.+++.++ ||||+++++.+.+....|++|||+++++|.++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~ 89 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDL 89 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEeccCCCCHHHH
Confidence 445667777777999999999876432 2335678999999999995 99999999999999999999999999999999
Q ss_pred Hc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 861 LH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 861 l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 90 l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~k 141 (314)
T cd08216 90 LKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVV 141 (314)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceE
Confidence 86 4589999999999999999999999999999999999999888764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.9e-16 Score=166.58 Aligned_cols=136 Identities=15% Similarity=0.216 Sum_probs=116.4
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeeccCCe----
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSMH---- 844 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~~~~---- 844 (908)
|++.+.||+|+||.||++++..+++.+|+|.+..... .......+.+|+.+++.+. .||+++++++.+.+...
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6789999999999999999998899999999875432 2223445667888877763 49999999999987776
Q ss_pred -EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 -AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 -~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++|||+. ++|.+++. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+|
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~ 147 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVK 147 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEE
Confidence 999999996 48888876 3589999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.6e-16 Score=167.93 Aligned_cols=135 Identities=14% Similarity=0.236 Sum_probs=117.7
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||.|+||.||++....+++.+++|.+...... .......+|...+..+..||+++++++.+.+....|++||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67889999999999999999989999999988654321 1223445788889998659999999999999999999999
Q ss_pred cCCCCcHHHHHc--C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH--T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~--~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+ +++|.+++. . .+++..+..++.|++.+|.|||++|++|+||||+||+++.++.+|
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~ 139 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVK 139 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEE
Confidence 99 789998886 2 689999999999999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.4e-16 Score=166.72 Aligned_cols=139 Identities=17% Similarity=0.205 Sum_probs=118.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECC-CCceEEEeeechhhh-------hccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRD-SENFLSLKRFSKQKV-------KCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~-~~~~~alK~~~~~~~-------~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+|++.+.||+|+||.||++.+.. +++.+|+|.+..... ........+..|..++...-.||||+++++.+..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999987 678999998764321 1122345677888888764469999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++.|++|||+++++|.+++. ..+++..++.++.|++.||.|||+ .|++|+||||+|||++.++.+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~ 154 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVT 154 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEE
Confidence 999999999999999998873 468999999999999999999996 7899999999999999988654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.5e-16 Score=165.38 Aligned_cols=131 Identities=18% Similarity=0.141 Sum_probs=108.9
Q ss_pred EEecCCCeEEEEEEEECC---CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec-cCCeEEEEEe
Q 002560 775 KCLYSTDCSEIGLVLLRD---SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA-DSMHAGLLLN 850 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~---~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~-~~~~~~iv~e 850 (908)
+.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|..+++.++ ||+++++++.+. .+...|++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFS-HPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccCC-CCCcceEEEEeecCCCCcEEEEe
Confidence 368999999999998753 34579999875322 2234567888999999985 999999999654 5567899999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+.+++|.+++. ..++...+..++.|++.||.|||+++|+||||||+|||+++++.+|
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~k 138 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVK 138 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEE
Confidence 999999999996 3467788889999999999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.8e-18 Score=166.99 Aligned_cols=138 Identities=15% Similarity=0.220 Sum_probs=117.2
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec-------
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA------- 840 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~------- 840 (908)
.+.|+.+.++|+|.||.||+++.+++++.+|+|++-... .+.+.....++|+.+|..++ |+|++.+...+.
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lk-Henv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLK-HENVVNLIEICRTKATPTN 93 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCcc
Confidence 456777889999999999999999999999998764422 23344556789999999995 999988876553
Q ss_pred -cCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 -DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 -~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+...+|+||.+|+. +|.-+|. .+++..+++.++.+++.||.|+|++.|+|||+||+|+||+.+|.+|
T Consensus 94 r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilk 164 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILK 164 (376)
T ss_pred cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEE
Confidence 33469999999964 8998887 5799999999999999999999999999999999999999999875
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.4e-16 Score=170.43 Aligned_cols=138 Identities=14% Similarity=0.167 Sum_probs=120.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|+..+.||.|+||.||++.+..++..+|+|.+.............+.+|+.+++.+. |++++++++++......|+|
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeEEE
Confidence 44777889999999999999999999999999986543333344567888999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+. ++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.+|.+|
T Consensus 94 ~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~k 155 (308)
T cd06634 94 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK 155 (308)
T ss_pred EEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEE
Confidence 99996 57777764 5689999999999999999999999999999999999999988764
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-17 Score=163.54 Aligned_cols=144 Identities=14% Similarity=0.225 Sum_probs=123.1
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 762 ~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..-.++-++++-+..||.|+||.|++..++.+|+..|+|.++.... .....+++.|.+...+-+..|+|+++|+..-.
T Consensus 57 ~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~ 134 (361)
T KOG1006|consen 57 HLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS 134 (361)
T ss_pred cccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc
Confidence 3445566777778899999999999999999999999999976554 34567888999988887789999999999888
Q ss_pred CCeEEEEEecCCCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH-------TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
++..||.||+| ..+|..+.. ..++|..+-.+.-..+.||.||.. ..||||||||+|||+|..|.+|
T Consensus 135 EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vK 208 (361)
T KOG1006|consen 135 EGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVK 208 (361)
T ss_pred CCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEe
Confidence 89999999999 456655443 579999999999999999999986 5899999999999999999886
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.6e-16 Score=167.77 Aligned_cols=135 Identities=15% Similarity=0.173 Sum_probs=119.6
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||.|++|.||++.+..+++.+++|.+..... .......+..|+.+++.++ ||+|+++++.+.+....|++||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEe
Confidence 5678899999999999999998999999998865442 2234567888999999996 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++ +|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+|
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~ 138 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLK 138 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEE
Confidence 9975 8888886 4789999999999999999999999999999999999999888764
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.65 E-value=5e-16 Score=168.10 Aligned_cols=135 Identities=16% Similarity=0.206 Sum_probs=120.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||+|+||.||++.+..+++.+|+|++.... ........+..|+.+++.++ |++++++++.+.+....|++||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEec
Confidence 677889999999999999999999999999987654 22334567788999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++ ++|.+++. ..+++..+..++.|++.||.|||++||+||||+|+||+++++|.+|
T Consensus 79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~ 138 (282)
T cd07829 79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLK 138 (282)
T ss_pred CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEE
Confidence 997 58999997 3799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.9e-16 Score=156.99 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=98.1
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccc-----------------------hHHHHHHHHHHHHhcCCCC
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLG-----------------------KEVQVLKEKNLMKSVSPSA 830 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~-----------------------~~~~~~~E~~il~~l~~~~ 830 (908)
.+.||+|+||.||+|.+. +|+.||+|+++........ .......|...+.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 468999999999999987 8999999998765311000 0123457888898885 67
Q ss_pred ccceeeeeeccCCeEEEEEecCCCCcHHH-HHc-CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCcc
Q 002560 831 CVPQILCTCADSMHAGLLLNTYLACPLAS-ILH-TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 831 ~i~~~~~~~~~~~~~~iv~e~~~gg~L~~-~l~-~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~v 907 (908)
++......... ..||||||++|+++.. .+. ..++...+..++.|++.++.+||+ +||+||||||+|||++ +|.+
T Consensus 80 ~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 80 GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred CCCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence 66333322222 2489999999885543 344 678889999999999999999999 9999999999999998 6654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-16 Score=172.62 Aligned_cols=143 Identities=10% Similarity=0.176 Sum_probs=123.7
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 762 ~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
.+.++.-+.+.+.++||+|-||.|.+|... .+..+|+|+++..... +....+.+|+++|.+| +||||+++++.|..
T Consensus 531 al~EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~--~~r~~F~kEIkiLsqL-khPNIveLvGVC~~ 606 (807)
T KOG1094|consen 531 ALVEFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATK--NARNDFLKEIKILSRL-KHPNIVELLGVCVQ 606 (807)
T ss_pred chhhcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccch--hHHHHHHHHHHHHhcc-CCCCeeEEEeeeec
Confidence 344566677899999999999999999864 3689999998765533 3457899999999999 49999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILHT----PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~~----~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++.++++|||++.|+|.+++.. .........++.||+.|+.||.+.+++||||.|.|+|+|.++++|
T Consensus 607 DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iK 677 (807)
T KOG1094|consen 607 DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIK 677 (807)
T ss_pred CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEE
Confidence 9999999999999999999972 224445566999999999999999999999999999999999886
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.5e-16 Score=165.95 Aligned_cols=136 Identities=15% Similarity=0.119 Sum_probs=113.4
Q ss_pred eEEEEEecCCCeEEEEEEEECC---CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC----
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRD---SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM---- 843 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~---~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~---- 843 (908)
|++.+.||+|+||.||++.... ++..+|+|++.... ......+.+.+|+.+++.+. ||+|+++++.+....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCc
Confidence 5678899999999999998643 57899999986543 22334567889999999995 999999999775432
Q ss_pred --eEEEEEecCCCCcHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 --HAGLLLNTYLACPLASILH--------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 --~~~iv~e~~~gg~L~~~l~--------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+++++|+.+++|..++. ..++...+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~k 153 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVC 153 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEE
Confidence 3478899999999988764 1478899999999999999999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-15 Score=170.66 Aligned_cols=137 Identities=16% Similarity=0.219 Sum_probs=117.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC------
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS------ 842 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~------ 842 (908)
++|.+.+.||+|+||.||++.+..+++.+|+|.+.+... .......+.+|+.+++.+. ||||+++++++...
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQ-HENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcC-CCCccchhheecccccCCCC
Confidence 579999999999999999999999999999998865432 2223456789999999995 99999999887654
Q ss_pred CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+. .+|..++...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 93 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~k 157 (342)
T cd07879 93 QDFYLVMPYMQ-TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELK 157 (342)
T ss_pred ceEEEEecccc-cCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 34699999995 478777766799999999999999999999999999999999999999988764
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2e-16 Score=171.37 Aligned_cols=131 Identities=11% Similarity=0.172 Sum_probs=114.5
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+.++...-++.||.|+.|.||+++. .++.||||.++.-. ..+++.|++|+ ||||+.|.++|.....
T Consensus 120 eiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~elk----------ETdIKHLRkLk-H~NII~FkGVCtqsPc 186 (904)
T KOG4721|consen 120 EIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRELK----------ETDIKHLRKLK-HPNIITFKGVCTQSPC 186 (904)
T ss_pred cCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhhhh----------hhhHHHHHhcc-CcceeeEeeeecCCce
Confidence 34555555577899999999999987 46899999764221 24677899995 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||||||..|.|..+|+ ..+.......|..+|+.|++|||.+.|||||||.-||||..+..||
T Consensus 187 yCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VK 252 (904)
T KOG4721|consen 187 YCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVK 252 (904)
T ss_pred eEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEE
Confidence 999999999999999998 7789999999999999999999999999999999999999877665
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.8e-16 Score=165.44 Aligned_cols=127 Identities=17% Similarity=0.121 Sum_probs=109.9
Q ss_pred EecCCCeEEEEEEEECCCC------ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 776 CLYSTDCSEIGLVLLRDSE------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~------~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.||+|+||.||+++++... ..+|+|.+.+... ......+.+|..+++.+. ||+|+++++++.+....|++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCCeEEEE
Confidence 5899999999999886543 6899998754321 223557888999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 850 NTYLACPLASILH---------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 850 e~~~gg~L~~~l~---------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||+++++|+||||+|||++.++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~ 143 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKG 143 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCC
Confidence 9999999999986 1367889999999999999999999999999999999999866
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-16 Score=168.28 Aligned_cols=146 Identities=16% Similarity=0.113 Sum_probs=123.0
Q ss_pred cccccccccc-cc-cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh----ccchHHHHHHHHHHHHhcCCCC
Q 002560 757 SIDISSLAKV-SL-TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK----CLGKEVQVLKEKNLMKSVSPSA 830 (908)
Q Consensus 757 ~~~~~~~~~~-~~-~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~----~~~~~~~~~~E~~il~~l~~~~ 830 (908)
..+.+.|.+- .+ +.|-++.+||+|+|+.||++.+....+++|+|+-...... +.+...+..+|.+|.+.|. ||
T Consensus 449 NEdnSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD-Hp 527 (775)
T KOG1151|consen 449 NEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD-HP 527 (775)
T ss_pred ccchhhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC-cc
Confidence 3444555442 23 4588899999999999999999999999999986443322 2445678899999999994 99
Q ss_pred ccceeeeeec-cCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC--CcEecCCCCCcEEEcC
Q 002560 831 CVPQILCTCA-DSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKR--GVLYRGVSPDVLMLDK 903 (908)
Q Consensus 831 ~i~~~~~~~~-~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~--gIiHrDIKp~NILi~~ 903 (908)
.|+++|++|. +.+.+|-|+|||+|.+|.-+|+ +.+++.+++.|+.||+.||.||.+. -|||-||||.|||+-.
T Consensus 528 RIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~ 605 (775)
T KOG1151|consen 528 RIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVN 605 (775)
T ss_pred eeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEec
Confidence 9999999985 6677899999999999999998 7799999999999999999999986 4999999999999964
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.4e-16 Score=178.72 Aligned_cols=143 Identities=12% Similarity=0.177 Sum_probs=126.0
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
...++..+.++.+.||+|.||+||+++... ....||||.++... +......|.+|++++..++ |||||++++
T Consensus 480 ~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~-H~nIVrLlG 556 (774)
T KOG1026|consen 480 VLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQ-HPNIVRLLG 556 (774)
T ss_pred eeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhcc-CCCeEEEEE
Confidence 446778899999999999999999997643 34589999987654 3336778999999999995 999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHc------------CC----CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE
Q 002560 838 TCADSMHAGLLLNTYLACPLASILH------------TP----LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~------------~~----l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi 901 (908)
.+..++.+|||+|||..|||.++|+ .. ++..+...++.||+.|++||-++.++||||-..|+||
T Consensus 557 VC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 557 VCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV 636 (774)
T ss_pred EEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee
Confidence 9999999999999999999999996 12 7788899999999999999999999999999999999
Q ss_pred cCCCccC
Q 002560 902 DKSGHLQ 908 (908)
Q Consensus 902 ~~~g~vK 908 (908)
.++-.||
T Consensus 637 ge~l~VK 643 (774)
T KOG1026|consen 637 GENLVVK 643 (774)
T ss_pred ccceEEE
Confidence 9887765
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-15 Score=156.68 Aligned_cols=131 Identities=14% Similarity=0.223 Sum_probs=118.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
-+|++.++||+|+||.++++.+.-++++||||.-+... ...++..|.+.++.|.+.+.|+..|.+.+...+-.||
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 47999999999999999999999999999999754332 3457888999999998899999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||++ |-+|.+++. ..|+..++..++.|++.-++|+|++.+|+|||||+|+||..-|
T Consensus 103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~ 161 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPG 161 (449)
T ss_pred hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCC
Confidence 9988 778877776 8899999999999999999999999999999999999998655
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.1e-16 Score=161.18 Aligned_cols=136 Identities=12% Similarity=0.110 Sum_probs=117.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCC-CC----ccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSP-SA----CVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~----~i~~~~~~~~~ 841 (908)
--+.|++++.||+|+||.|-.|.+..++..+|+|+++.-. ...+..+-|+++|+++.. .| .++.+.++|.-
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy 162 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY 162 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence 3577999999999999999999999999999999986432 245567789999999832 22 36677788999
Q ss_pred CCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 842 SMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
.++.|||+|.+ |.+++++|. .+++...++.+++|++.++.|||+.+++|-||||||||+-+..+.
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceE
Confidence 99999999988 779999997 579999999999999999999999999999999999999876543
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.9e-16 Score=167.60 Aligned_cols=139 Identities=17% Similarity=0.124 Sum_probs=116.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 761 SSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 761 ~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
..+-.++=..|++++.||+||.+.||+|...+.+ .||+|.+... ..+......+.+|+.+|.+|++|..|+++|++-.
T Consensus 353 ~~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~-iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv 430 (677)
T KOG0596|consen 353 NEIIKVKGREYEILKQIGSGGSSKVFKVLNSDKQ-IYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV 430 (677)
T ss_pred CeeEEECcchhhHHHhhcCCCcceeeeeecCCCc-chhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence 3455566677999999999999999999876544 4555544332 2345567889999999999999999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
.++++||||||= ..+|..+|+ ..++.-.+++|..||+.|+.++|.+||||.||||.|+|+-
T Consensus 431 ~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV 494 (677)
T KOG0596|consen 431 TDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV 494 (677)
T ss_pred cCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE
Confidence 999999999976 579999998 3344458999999999999999999999999999999985
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.62 E-value=2e-15 Score=161.45 Aligned_cols=133 Identities=14% Similarity=0.130 Sum_probs=114.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|..+++.++ ||||+++++.+.+....|+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD-HPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC-CCcHHHHHHHHhcCCceEE
Confidence 488999999999999999999887777777776543321 1223445677889999985 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 848 LLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 848 v~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||||+||+++.
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~ 141 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN 141 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec
Confidence 999999999998874 46899999999999999999999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.8e-16 Score=172.28 Aligned_cols=135 Identities=21% Similarity=0.205 Sum_probs=118.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|++...+|.|+|+.|..|.+..+++.+++|++.+... ...+|..++....+|||+++++..+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCceee
Confidence 46789999999999999999999999999999999987621 23356767777778999999999999999999
Q ss_pred EEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE-cCCCccC
Q 002560 847 LLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML-DKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi-~~~g~vK 908 (908)
+|||++.|+.|.+.+. .+.....+..|+++|+.|+.|||++|++||||||+|||+ ++.|++|
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lr 456 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLR 456 (612)
T ss_pred eeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEE
Confidence 9999999999888877 444448888999999999999999999999999999999 5888764
|
|
| >smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.5e-14 Score=144.61 Aligned_cols=175 Identities=15% Similarity=0.120 Sum_probs=118.2
Q ss_pred CCCCcceEEEecCCCCCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhccCCC
Q 002560 111 DKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDD 190 (908)
Q Consensus 111 r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~ 190 (908)
....-|.|.+.. .+++..+++|+|||| +..+|.+++..+...+........ .+.+.+..+|+.+.... .
T Consensus 14 ~~~~GD~~~~~~---~~~~~~~~~v~Dg~G--~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n~~l~~~~--~ 82 (193)
T smart00331 14 TQVGGDFYDVVK---LPEGRLLIAIADVMG--KGLAAALAMSMARSALRTLLSEGI----SLSQILERLNRAIYENG--E 82 (193)
T ss_pred HhcCccEEEEEE---eCCCeEEEEEEecCC--CChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHHHHHHhcC--C
Confidence 456778887644 234578999999999 334444444444444433222111 24556667788887652 3
Q ss_pred CCCcceEEEEEE--ECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCc
Q 002560 191 SMSGTTAVTVLV--RGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDV 268 (908)
Q Consensus 191 ~~~GtT~~~~~i--~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~ 268 (908)
..+|+|++++++ ..++++++|+||+|+|+++.++.. ...+.+.
T Consensus 83 ~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~---~~~~~~~-------------------------------- 127 (193)
T smart00331 83 DGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGL---VEDLDDL-------------------------------- 127 (193)
T ss_pred CCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCe---EEEcCCC--------------------------------
Confidence 347999999998 588999999999999999843321 1122221
Q ss_pred ccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEEEEcCccccccChHHHHHHH
Q 002560 269 QCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMV 348 (908)
Q Consensus 269 ~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v 348 (908)
++.+|.. ...++++...++.++|. |+|+||||||.++.+++.+++
T Consensus 128 ----------------------------~~~lG~~------~~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~l~~~l 172 (193)
T smart00331 128 ----------------------------GAPLGLE------PDVEVDVRELTLEPGDL-LLLYTDGLTEARNPERLEELL 172 (193)
T ss_pred ----------------------------CceeeeC------CCCcceeEEEeeCCCCE-EEEECCCccccCChHHHHHHH
Confidence 2233322 12356778889999998 699999999999999999998
Q ss_pred hcc--CCHHHHHHHHHHHHH
Q 002560 349 AKY--KDPRDACAAIVAESY 366 (908)
Q Consensus 349 ~~~--~~~~~~a~~Lv~~a~ 366 (908)
.+. .++++.++.+.+++.
T Consensus 173 ~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 173 EELLGSPPAEIAQRILEELL 192 (193)
T ss_pred HHhcCCCHHHHHHHHHHHHh
Confidence 775 467777777776653
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-15 Score=159.26 Aligned_cols=131 Identities=14% Similarity=0.157 Sum_probs=113.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhc-CCCCccceeeeeeccC----C
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV-SPSACVPQILCTCADS----M 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~~i~~~~~~~~~~----~ 843 (908)
.+..+.+.||+|.||.||++.+ .|+.||||+++.. .+....+|.+|++.. -.|+||..|++.=..+ .
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 5688899999999999999988 5789999998654 356788899998874 2499999988654322 3
Q ss_pred eEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC--------CcEecCCCCCcEEEcCCCcc
Q 002560 844 HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKR--------GVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~--------gIiHrDIKp~NILi~~~g~v 907 (908)
.+|+|++|.+.|+|+++|. ..++......++..++.||.+||.. .|.|||||..|||+-++|.+
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred EEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 5899999999999999999 8899999999999999999999953 49999999999999999865
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.3e-15 Score=160.79 Aligned_cols=141 Identities=10% Similarity=0.062 Sum_probs=102.7
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC---CceEEEeeechhhhhc--c------chHHHHHHHHHHHHhcCCCCccce
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS---ENFLSLKRFSKQKVKC--L------GKEVQVLKEKNLMKSVSPSACVPQ 834 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~---~~~~alK~~~~~~~~~--~------~~~~~~~~E~~il~~l~~~~~i~~ 834 (908)
+.-+.|++.+.||+|+||.||++.+..+ +..+|+|+........ . ........+...+..+ .|+++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~ 87 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPK 87 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCc
Confidence 3446899999999999999999998877 6677887643221100 0 0001112233334455 4899999
Q ss_pred eeeeeccCC----eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 835 ILCTCADSM----HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 835 ~~~~~~~~~----~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++...... ..|++|+++. .++.+.+. ...++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEE
Confidence 997654432 4578888874 46666665 4578889999999999999999999999999999999999887654
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-16 Score=158.36 Aligned_cols=137 Identities=17% Similarity=0.187 Sum_probs=115.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM----- 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~----- 843 (908)
.|.+--+.||.|+||.||.+.+..+|+.+|+|.+..-. .....-+++.+|..+|..++ |.|+...++..+..+
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFq 130 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQ 130 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHH
Confidence 34455578999999999999999999999999886432 23334578999999999995 999988887766543
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+++|++. .+|..++- +.++...++-+..||+.||.|||+.+|+||||||.|+|++++-.+|
T Consensus 131 EiYV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLK 196 (449)
T KOG0664|consen 131 ELYVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILK 196 (449)
T ss_pred HHHHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEE
Confidence 4688999885 58888876 7899999999999999999999999999999999999999886654
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.1e-15 Score=176.26 Aligned_cols=143 Identities=18% Similarity=0.194 Sum_probs=126.4
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCc-----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN-----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~-----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
+..++....++.+.||+|.||.||.+....... .||+|.+.+.. +......|++|..+|+.++ ||||+++++
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f~-HpNiv~liG 762 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKFD-HPNIVSLIG 762 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcCC-CcceeeEEE
Confidence 556778889999999999999999998765433 48888876543 4556788999999999996 999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 838 TCADSMHAGLLLNTYLACPLASILH---------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~---------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+-+....+|++|||+||+|..+|+ ..++......++.+|++|.+||+++++|||||-..|+||+....+|
T Consensus 763 v~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VK 842 (1025)
T KOG1095|consen 763 VCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVK 842 (1025)
T ss_pred eecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEE
Confidence 9999999999999999999999998 2488999999999999999999999999999999999999887665
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.4e-15 Score=159.81 Aligned_cols=134 Identities=15% Similarity=0.137 Sum_probs=116.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhc-CCCCccceeeeeeccC--
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV-SPSACVPQILCTCADS-- 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~~i~~~~~~~~~~-- 842 (908)
..+...++.+.+|+|.||.||+++. +++.||||+++... .+.+.+|.+|+... -.|+||++++..-...
T Consensus 207 ~~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~ 278 (534)
T KOG3653|consen 207 LELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTA 278 (534)
T ss_pred ccCCchhhHHHhhcCccceeehhhc--cCceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhccCCc
Confidence 3477888899999999999999988 45999999987543 56788999998875 3599999998765443
Q ss_pred --CeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---------CCcEecCCCCCcEEEcCCCcc
Q 002560 843 --MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHK---------RGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 843 --~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~---------~gIiHrDIKp~NILi~~~g~v 907 (908)
..+++|++|.+.|+|.++|. ..++......++..++.||.|||+ ..|+|||||..||||-+++.+
T Consensus 279 ~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTc 355 (534)
T KOG3653|consen 279 DRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTC 355 (534)
T ss_pred cccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcE
Confidence 47899999999999999999 889999999999999999999996 359999999999999988764
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.8e-16 Score=173.79 Aligned_cols=138 Identities=14% Similarity=0.182 Sum_probs=126.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.-++|+.+..+|.|+||.||+++++.+++..|+|+++...-. ....+..|+-+++.++ ||||+.+++.|.....+|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d---d~~~iqqei~~~~dc~-h~nivay~gsylr~dklw 88 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD---DFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKLW 88 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc---cccccccceeeeecCC-CcChHHHHhhhhhhcCcE
Confidence 357899999999999999999999999999999998765432 3455678888888875 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.||||.||+|.+..+ +++++..+.+..++.+.||.|||+.|=+|||||-.|||+++.|.+|
T Consensus 89 icMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvk 152 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVK 152 (829)
T ss_pred EEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCcee
Confidence 9999999999999888 8999999999999999999999999999999999999999999876
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-15 Score=161.18 Aligned_cols=130 Identities=13% Similarity=0.230 Sum_probs=118.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECC---CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRD---SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~---~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+.|..+.+||+|+|+.||++.+.. ..+.+|+|.+.... ...++.+|+++|..+.++.||+.+.+.+..++.
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 5679999999999999999998877 67899999876544 345799999999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
..+||||++..+..+++. .++...++.|++.++.||.++|.+|||||||||.|+|.+.
T Consensus 110 v~ivlp~~~H~~f~~l~~-~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~ 167 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYR-SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR 167 (418)
T ss_pred eEEEecccCccCHHHHHh-cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc
Confidence 999999999998888875 6778999999999999999999999999999999999874
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.4e-15 Score=172.81 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=97.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeee---
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT--- 838 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~--- 838 (908)
+..++|++.+.||+|+||.||++.+..+ +..+|+|.+..... .+....| .+ .... +.++..+...
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e-~l-~~~~-~~~~~~~~~~~~~ 200 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE-RV-RRAC-PNSCADFVYGFLE 200 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH-HH-Hhhc-hhhHHHHHHhhhc
Confidence 4678999999999999999999999988 89999998754221 1111222 11 1111 2222222211
Q ss_pred ---eccCCeEEEEEecCCCCcHHHHHc-CCC---------------------CHHHHHHHHHHHHHHHHHHHhCCcEecC
Q 002560 839 ---CADSMHAGLLLNTYLACPLASILH-TPL---------------------DEQSARFCAASVVAALEDLHKRGVLYRG 893 (908)
Q Consensus 839 ---~~~~~~~~iv~e~~~gg~L~~~l~-~~l---------------------~~~~~~~~~~qi~~aL~~LH~~gIiHrD 893 (908)
.......|++|||+.+++|.+++. ..+ ....+..++.||+.||.|||++||+|||
T Consensus 201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD 280 (566)
T PLN03225 201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD 280 (566)
T ss_pred ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence 245667999999999999999886 221 1234667999999999999999999999
Q ss_pred CCCCcEEEcC-CCccC
Q 002560 894 VSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 894 IKp~NILi~~-~g~vK 908 (908)
|||+|||++. ++.+|
T Consensus 281 LKP~NILl~~~~~~~K 296 (566)
T PLN03225 281 VKPQNIIFSEGSGSFK 296 (566)
T ss_pred CCHHHEEEeCCCCcEE
Confidence 9999999985 46554
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.3e-15 Score=188.08 Aligned_cols=130 Identities=15% Similarity=0.122 Sum_probs=113.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|...+.||+|+||.||++++..++..||+|.+..... ....|+.++++++ ||||+++++++.+....|+|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEE
Confidence 456677889999999999999998999999998764321 1124577888984 99999999999999999999
Q ss_pred EecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCcEecCCCCCcEEEcCCCcc
Q 002560 849 LNTYLACPLASILHTPLDEQSARFCAASVVAALEDLH---KRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 849 ~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH---~~gIiHrDIKp~NILi~~~g~v 907 (908)
|||+++|+|.++++ .+++.....++.|++.||.||| +.+|+||||||+|||++.++..
T Consensus 762 ~Ey~~~g~L~~~l~-~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~ 822 (968)
T PLN00113 762 HEYIEGKNLSEVLR-NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEP 822 (968)
T ss_pred EeCCCCCcHHHHHh-cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCce
Confidence 99999999999996 5888999999999999999999 6799999999999999987653
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-14 Score=167.04 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=106.3
Q ss_pred cccccceEEEEEecCCCeEEEEEEEEC----------------CCCceEEEeeechhhhhc-----------cchHHHHH
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLR----------------DSENFLSLKRFSKQKVKC-----------LGKEVQVL 817 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~----------------~~~~~~alK~~~~~~~~~-----------~~~~~~~~ 817 (908)
+++.++|.+.++||+|+||.||++... ..++.+|||.+....... ....+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 346789999999999999999998642 234679999975432110 11122344
Q ss_pred HHHHHHHhcCCCCc----cceeeeeec--------cCCeEEEEEecCCCCcHHHHHcC----------------------
Q 002560 818 KEKNLMKSVSPSAC----VPQILCTCA--------DSMHAGLLLNTYLACPLASILHT---------------------- 863 (908)
Q Consensus 818 ~E~~il~~l~~~~~----i~~~~~~~~--------~~~~~~iv~e~~~gg~L~~~l~~---------------------- 863 (908)
.|..++.++.+++. +++++++|. .....|+||||+++++|.++++.
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 57777777754432 345555443 23568999999999999998861
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 ----PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 ----~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++...++.++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~k 349 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVK 349 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEE
Confidence 124567888999999999999999999999999999999888764
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-14 Score=147.58 Aligned_cols=130 Identities=15% Similarity=0.092 Sum_probs=103.8
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHH------HHHHHHHHHhcCCCCccceeeeeec
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQ------VLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~------~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
--.+|++.+.||.|+||.||++.. ++..+|+|++............. +.+|...+.++. ||+|+.+...+.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-~~GI~~~~d~~~ 105 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-SEGLASLNDFYL 105 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-HCCCCcceEeee
Confidence 346799999999999999999755 46689999987654333333233 578888999995 999998887755
Q ss_pred cC--------CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 841 DS--------MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 841 ~~--------~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
+. ...+++|||++|.+|.++.. +++ ....+++.+|..||++|++|||+||+|||++.+|
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE--ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh--ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC
Confidence 33 35899999999999988743 333 2456999999999999999999999999999877
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.9e-15 Score=166.69 Aligned_cols=141 Identities=9% Similarity=0.079 Sum_probs=127.8
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCc---eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
.++.+...|.++||.|.||.|+.++.+..++ .||||.++... ..++...|+.|..||-++. ||||+++-+....
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTk 701 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTK 701 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCC-CCcEEEEEEEEec
Confidence 4677889999999999999999999887664 89999987544 3456788999999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+.||+|||++|+|..+|+ +.|+..+...+.+.|+.|++||-+.|++||||-..|||++.+-.+|
T Consensus 702 s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCK 771 (996)
T KOG0196|consen 702 SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCK 771 (996)
T ss_pred CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEE
Confidence 999999999999999999998 7799999999999999999999999999999999999999987665
|
|
| >KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.6e-15 Score=167.04 Aligned_cols=209 Identities=21% Similarity=0.287 Sum_probs=168.2
Q ss_pred cCCCEEEcCCCcCCeEEEEEEeEEEEEEeccc--cCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccceEEEEE
Q 002560 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE--KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWAL 579 (908)
Q Consensus 502 ~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~--g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~~~l~~i 579 (908)
+..++|.++|+...++|+|.+|.+.++....+ ++.... -...+..+||+++|-++++.+.|...+++|.++|.+..|
T Consensus 392 keitiiv~q~a~~~gl~~ii~g~l~v~~sm~~~s~~~~~~-~~~~f~v~pG~ivgyla~lt~e~S~~tirArsdt~v~~i 470 (1158)
T KOG2968|consen 392 KEITIIVEQGARDVGLYYIIKGSLSVYQSMYDVSGNLVLA-GMLLFVVGPGEIVGYLAILTNEPSFITIRARSDTRVLFI 470 (1158)
T ss_pred cceEEEEecccccceeeEEeecceeeeehhcccccccccc-cceEEEecCCceechhhhhcCCcceEEEEEecceEEEEe
Confidence 44555799999999999999999988865432 211111 123455699999999999999999999999999999999
Q ss_pred eHHHHHHHHhhhhhhH--HHHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcc
Q 002560 580 KREDFRGILMSEFSNL--SSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA 657 (908)
Q Consensus 580 ~~~~f~~ll~~~~~~~--~~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~ 657 (908)
++.+|.+++.+.|..- ..-..++ .++ .-+.++-.++.+..+.+|+.+++|||.+|.+|+|.+|.++-....
T Consensus 471 srs~l~~~~~~~p~I~L~ia~svl~------~ls-p~lr~~D~AldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~ 543 (1158)
T KOG2968|consen 471 SRSDLERFLDAEPLIYLRIAHSVLR------RLS-PFLRKLDFALDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQ 543 (1158)
T ss_pred eHHHHHHHHHhCceEEEehhhHHHH------hcC-HHHhhhhhhcceEEeccccHHHhcCCccCcEEEEecCeehhhhhc
Confidence 9999999999988421 1111222 222 234567788999999999999999999999999999999865433
Q ss_pred cccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCcccccc
Q 002560 658 DLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS 737 (908)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~ 737 (908)
. .++...+.++++||.+|+.+.+++++|..||.|+.++++.+|+..-|+-+.-.+|++.
T Consensus 544 ~---------------------~~k~~i~~EygrGd~iG~~E~lt~~~R~tTv~AvRdSelariPe~l~~~ik~ryP~v~ 602 (1158)
T KOG2968|consen 544 S---------------------GGKKEIVGEYGRGDLIGEVEMLTKQPRATTVMAVRDSELARIPEGLLNFIKLRYPQVV 602 (1158)
T ss_pred c---------------------CccchhhhhccCcceeehhHHhhcCCccceEEEEeehhhhhccHHHHHHHHHhccHHH
Confidence 2 2345689999999999999999999999999999999999999999988887777765
Q ss_pred cc
Q 002560 738 HD 739 (908)
Q Consensus 738 ~~ 739 (908)
.+
T Consensus 603 ~r 604 (1158)
T KOG2968|consen 603 TR 604 (1158)
T ss_pred HH
Confidence 53
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-14 Score=151.70 Aligned_cols=133 Identities=12% Similarity=0.092 Sum_probs=101.9
Q ss_pred ceEEEEEecCCCeEEEEEEE-ECCCCceEEEeeechhhhhcc---------------------chHHHHHHHHHHHHhcC
Q 002560 770 DMEWRKCLYSTDCSEIGLVL-LRDSENFLSLKRFSKQKVKCL---------------------GKEVQVLKEKNLMKSVS 827 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~-~~~~~~~~alK~~~~~~~~~~---------------------~~~~~~~~E~~il~~l~ 827 (908)
.|.+.+.||+|+||.||+|. +..+++.+|+|++........ .....+..|..++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47888999999999999998 677899999999875431100 01123568999999985
Q ss_pred C-CCccceeeeeeccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC-cEecCCCCCcEEEcC
Q 002560 828 P-SACVPQILCTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRG-VLYRGVSPDVLMLDK 903 (908)
Q Consensus 828 ~-~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~g-IiHrDIKp~NILi~~ 903 (908)
+ ...+++++.. ...|+||||+.|.+|...+. ..+....+..++.|++.+|.+||++| |+||||||+|||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 2 2334455542 23489999999988876553 55666678899999999999999999 99999999999998
Q ss_pred CCcc
Q 002560 904 SGHL 907 (908)
Q Consensus 904 ~g~v 907 (908)
++.+
T Consensus 184 ~~~i 187 (237)
T smart00090 184 DGKV 187 (237)
T ss_pred CCCE
Confidence 5544
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.5e-15 Score=160.86 Aligned_cols=137 Identities=15% Similarity=0.204 Sum_probs=122.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.-.+.....+||-|.||.||.+.+++..-.+|+|.++.+.+ ..+.|+.|..+|+.+ +|||+++++++|.-+..+|
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeE
Confidence 34567778899999999999999999999999998865443 467899999999999 5999999999999999999
Q ss_pred EEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+|||..|+|.++|+ ..++.-....++.||..|++||..+++|||||-..|+|+.++..+|
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVK 405 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVK 405 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEE
Confidence 9999999999999998 4567777788899999999999999999999999999999887665
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.3e-14 Score=146.39 Aligned_cols=134 Identities=22% Similarity=0.318 Sum_probs=120.0
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|...+..++ |++++++++.+......|+++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLK-HPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCC-CCChhhheeeeecCCceEEEEe
Confidence 56789999999999999999988999999998765432 24567888999999995 9999999999998899999999
Q ss_pred cCCCCcHHHHHc--CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 851 TYLACPLASILH--TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~--~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
++++++|.+++. .. +++..+..++.+++.++.+||+++++|+||+|.||+++.++.+
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~ 137 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLV 137 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCE
Confidence 999999999997 34 8999999999999999999999999999999999999987765
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-14 Score=147.57 Aligned_cols=139 Identities=21% Similarity=0.219 Sum_probs=115.5
Q ss_pred CceeEEEEccceEEEEEeHHHHHHHHh-hhhh-hHHHHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCC
Q 002560 563 PLQASVRAVTNGMLWALKREDFRGILM-SEFS-NLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGV 640 (908)
Q Consensus 563 ~r~~tv~A~~~~~l~~i~~~~f~~ll~-~~~~-~~~~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~ 640 (908)
.|..+|.|.+-+.-. +.|...+. +... .+....+++++-+|.+|+++++.++.+++..+.+++|+.|+.||+.+
T Consensus 88 ~RRssV~aE~~tp~~----d~~~~~~~pKd~e~~~~L~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeG 163 (368)
T KOG1113|consen 88 VRRSSVSAEEITPDD----DEFKRKYIPKDDETRRRLEEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEG 163 (368)
T ss_pred cccceeeeeecCccc----hhhhhcCCCCCHHHHHHHHHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcC
Confidence 444555554432222 44444443 2233 33455789999999999999999999999999999999999999999
Q ss_pred CeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEE
Q 002560 641 AALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAI 720 (908)
Q Consensus 641 d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~ 720 (908)
|+||||-+|++.|++... .+..+++|.+|||+||+.+.||.+||+|.+++.++.
T Consensus 164 d~fYvI~kGt~dVyv~~~--------------------------~v~~~~~g~sFGElALmyn~PRaATv~a~t~~klWg 217 (368)
T KOG1113|consen 164 DNFYVIDKGTFDVYVNGT--------------------------YVTTYSPGGSFGELALMYNPPRAATVVAKSLKKLWG 217 (368)
T ss_pred CcEEEEecceEEEEECCe--------------------------EEeeeCCCCchhhhHhhhCCCcccceeeccccceEE
Confidence 999999999999998765 688999999999999999999999999999999999
Q ss_pred ecccccccccC
Q 002560 721 LTKEKFDLVVG 731 (908)
Q Consensus 721 i~~~~f~~llg 731 (908)
|++..|.+++-
T Consensus 218 ldr~SFrrIi~ 228 (368)
T KOG1113|consen 218 LDRTSFRRIIM 228 (368)
T ss_pred EeeceeEEEee
Confidence 99999977653
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.7e-14 Score=142.50 Aligned_cols=128 Identities=19% Similarity=0.303 Sum_probs=114.4
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|.+|.||++....+++.+++|++....... ....+.+|+..++.+. |+++++++..+......+++||++.+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999998889999999987554221 3467889999999996 7999999999999899999999999999
Q ss_pred HHHHHc-C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCcc
Q 002560 857 LASILH-T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHL 907 (908)
Q Consensus 857 L~~~l~-~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~v 907 (908)
|.+++. . .++...+..++.+++.++.+||++|++|+||+|.||+++. ++.+
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~ 132 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKV 132 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcE
Confidence 999997 3 6899999999999999999999999999999999999998 5654
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.1e-14 Score=140.06 Aligned_cols=126 Identities=14% Similarity=0.038 Sum_probs=97.6
Q ss_pred EEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccc-hHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 772 EWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLG-KEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~-~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
.+...|++|+||+|+++.. .+..++.+.+......... ....+.+|+.+|++|.+++++++++++ +..|++|+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3567899999999998765 5667776666544332111 122478999999999878999999885 45799999
Q ss_pred cCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCC-CCCcEEEcCCCccC
Q 002560 851 TYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGV-SPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDI-Kp~NILi~~~g~vK 908 (908)
|+.|.+|.+.+.. . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++
T Consensus 79 yI~G~~L~~~~~~----~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~ 132 (218)
T PRK12274 79 YLAGAAMYQRPPR----G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPA 132 (218)
T ss_pred eecCccHHhhhhh----h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEE
Confidence 9999999765421 1 2357889999999999999999999 79999999888753
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.8e-14 Score=154.84 Aligned_cols=132 Identities=16% Similarity=0.179 Sum_probs=112.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCC-ceEEEeeechhhhhccchHHHHHHHHHHHHhcC---CCCccceeeeee-ccCCe
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSE-NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS---PSACVPQILCTC-ADSMH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~-~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~---~~~~i~~~~~~~-~~~~~ 844 (908)
.|++.+.||+|+||.||+|.+..++ ..+|+|+........ ...+..|..++..+. +.++++.++... ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999988774 689999876543211 115667888888875 346899999988 58889
Q ss_pred EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
-||||+.+ |.+|.++.. +.++..++..++.|++.+|++||+.|++||||||+|+++...+
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~ 159 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS 159 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC
Confidence 99999988 899999885 6799999999999999999999999999999999999998653
|
|
| >PRK09392 ftrB transcriptional activator FtrB; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-13 Score=144.30 Aligned_cols=120 Identities=18% Similarity=0.250 Sum_probs=108.7
Q ss_pred HHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCC
Q 002560 472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLS 551 (908)
Q Consensus 472 ~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~ 551 (908)
.++|+.+++|..|++++++.|...+..+.|++|++|+++|+.++.+|+|++|.++++... +|++.+.. .+++|+
T Consensus 6 ~~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~-~~~~~~i~-----~~~~g~ 79 (236)
T PRK09392 6 LIRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASS-QDRETTLA-----ILRPVS 79 (236)
T ss_pred HHHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcC-CCceEEEE-----EeCCCc
Confidence 458899999999999999999999999999999999999999999999999999999875 45454433 348899
Q ss_pred cchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHHH
Q 002560 552 SFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 552 ~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~ 597 (908)
+||+.+++.+.++.++++|.++|+++.|+++.|.+++.++|.....
T Consensus 80 ~~g~~~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~~ 125 (236)
T PRK09392 80 TFILAAVVLDAPYLMSARTLTRSRVLMIPAELVREAMSEDPGFMRA 125 (236)
T ss_pred hhhhHHHhCCCCCceEEEEcCceEEEEEeHHHHHHHHHHCHHHHHH
Confidence 9999999999999999999999999999999999999999986643
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.6e-14 Score=153.15 Aligned_cols=134 Identities=10% Similarity=0.191 Sum_probs=113.1
Q ss_pred eEEEEEecCCCeEEEEEEEECCC--C--ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDS--E--NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~--~--~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..+.+.||.|-||.||.+..... | --||+|.-+++.. ....+.|+.|..+|+.+. ||||+++++.+.+ ...|
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnfd-HphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNFD-HPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC--hhhHHHHHHHHHHHHhCC-Ccchhheeeeeec-ccee
Confidence 33446899999999999976432 3 3688887665432 334678999999999995 9999999999865 4799
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+++-|.|..+|+ ..++......|+.||+.||.|||++.++||||-..|||+.+..-+|
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVK 531 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVK 531 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceee
Confidence 9999999999999998 5789999999999999999999999999999999999998765443
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.7e-14 Score=149.55 Aligned_cols=144 Identities=19% Similarity=0.207 Sum_probs=121.8
Q ss_pred ccccccccccc-----cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCC----
Q 002560 758 IDISSLAKVSL-----TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSP---- 828 (908)
Q Consensus 758 ~~~~~~~~~~~-----~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~---- 828 (908)
+++..+..+.+ ..|.+....|+|-||.|..|.+...+..||||++....+. ...=+.|+.||++|+.
T Consensus 416 dDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~E 491 (752)
T KOG0670|consen 416 DDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPE 491 (752)
T ss_pred ccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCch
Confidence 34444544444 4599999999999999999999999999999999876643 3345689999999942
Q ss_pred -CCccceeeeeeccCCeEEEEEecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 829 -SACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 829 -~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
--++++++..|...+++|||+|.+ ..+|.++|. -.+....++.|+.|+..||..|...||+|.||||+|||++
T Consensus 492 dk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN 570 (752)
T KOG0670|consen 492 DKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN 570 (752)
T ss_pred hhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec
Confidence 236789999999999999999988 679999997 2588899999999999999999999999999999999999
Q ss_pred CCCc
Q 002560 903 KSGH 906 (908)
Q Consensus 903 ~~g~ 906 (908)
+..+
T Consensus 571 E~k~ 574 (752)
T KOG0670|consen 571 ESKN 574 (752)
T ss_pred cCcc
Confidence 7644
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.6e-14 Score=152.47 Aligned_cols=151 Identities=22% Similarity=0.321 Sum_probs=131.2
Q ss_pred HHHHHHHHhhccCCcccccCcccccC-----CHHHHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCC
Q 002560 438 RARLRAIENSLENGQIWVPSSSAHRK-----TWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGG 512 (908)
Q Consensus 438 ~~~r~~~~~~~~~~~~~~~~~~~~~k-----~~e~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd 512 (908)
...|.|+..++.+...|.++|.+|.- ..+..+...++|+..|+|.+|+++.+.++++.++...|.+|++|+++|+
T Consensus 232 nctRtAsV~alt~~~lWaidR~vFq~IM~~tg~~r~~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~Yd~g~yIirqge 311 (732)
T KOG0614|consen 232 NCTRTASVRALTDVRLWAIDREVFQAIMMRTGLERHEQYMNFLRSVPLFQNLPEELLLKIADVLEEEYYDAGEYIIRQGE 311 (732)
T ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHhhcCCceEEeecC
Confidence 34567777788889999999988754 4566788899999999999999999999999999999999999999999
Q ss_pred cCCeEEEEEEeEEEEEEeccc-cCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccc-eEEEEEeHHHHHHHHhh
Q 002560 513 EGDCFYVVGSGEFEVMATQEE-KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTN-GMLWALKREDFRGILMS 590 (908)
Q Consensus 513 ~~~~~yiI~~G~v~v~~~~~~-g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~-~~l~~i~~~~f~~ll~~ 590 (908)
.++.||+|-+|.|.|...++. +.+..+. +++.||+|||-+|+....|+|++.|..+ ++++.|+++.|.+++..
T Consensus 312 ~G~~ffii~~G~V~vtq~~e~~~q~~~lr-----~l~kGd~FGE~al~~edvRtAniia~~~gv~cl~lDresF~~liG~ 386 (732)
T KOG0614|consen 312 KGDTFFIISKGTVKVTQQDEGSTQPQELR-----TLNKGDYFGERALLGEDVRTANIIAQAPGVECLTLDRESFKKLIGD 386 (732)
T ss_pred CCCeEEEEecceEEEeecCCCCCchhHHh-----hccccchhhHHHhhccCccchhhhccCCCceEEEecHHHHHHhccc
Confidence 999999999999999987764 3333333 3478999999999999999999999998 99999999999999876
Q ss_pred hhh
Q 002560 591 EFS 593 (908)
Q Consensus 591 ~~~ 593 (908)
..+
T Consensus 387 l~~ 389 (732)
T KOG0614|consen 387 LEE 389 (732)
T ss_pred HHH
Confidence 543
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.3e-14 Score=157.88 Aligned_cols=139 Identities=12% Similarity=0.096 Sum_probs=120.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-Cc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-EN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
|..++..+.++||+|.||.|+.+.+... |+ .||||++....... ....|++|..+|.+|. |++++++|+...+
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~-H~hliRLyGvVl~- 182 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQ-HPHLIRLYGVVLD- 182 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhcc-CcceeEEeeeecc-
Confidence 4566777889999999999999988653 33 78999987654332 5678999999999995 9999999999887
Q ss_pred CeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+.||||+++.|+|.+.|+ ..|.......|+.||+.|+.||.++++|||||-..|+|+-..-.||
T Consensus 183 qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVK 252 (1039)
T KOG0199|consen 183 QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVK 252 (1039)
T ss_pred chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceee
Confidence 67889999999999999997 5688899999999999999999999999999999999997765554
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.2e-14 Score=144.05 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=118.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
...|.-++.+|.|.- .|..+.+.-+++.+|+|.+... .......++..+|..++..+. |+|+++++.+|...
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVN-HKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhc-ccceeeeeeccCccccHHH
Confidence 456888889999988 7778888889999999988765 333455678889999999995 99999999988654
Q ss_pred -CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 -MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 -~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|+|||++ ..+|.+.+.-.++...+.++..|++.|++|||+.||+||||||+||++..++.+|
T Consensus 93 ~~e~y~v~e~m-~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lK 158 (369)
T KOG0665|consen 93 FQEVYLVMELM-DANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLK 158 (369)
T ss_pred HHhHHHHHHhh-hhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhhee
Confidence 3579999999 5689988887789999999999999999999999999999999999999887765
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.2e-13 Score=139.67 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=99.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhh-----ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK-----CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+.||+|++|.||++.+ .+..+++|+....... .......+.+|..++..+. +++++....++.+....+++|
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999987 6678899975432211 1112346788999999985 777766555566677889999
Q ss_pred ecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 850 NTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 850 e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
||++|++|.+++....+ ....++.+++.+|.+||++|++|||++|.|||++ ++.
T Consensus 79 e~~~G~~L~~~~~~~~~--~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~ 132 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM--EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGK 132 (211)
T ss_pred EEeCCcCHHHHHHhccH--HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCC
Confidence 99999999999873222 7788999999999999999999999999999998 443
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.3e-13 Score=141.01 Aligned_cols=125 Identities=24% Similarity=0.417 Sum_probs=111.2
Q ss_pred CeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCcHHHH
Q 002560 781 DCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASI 860 (908)
Q Consensus 781 ~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~ 860 (908)
+||.||++.+..+++.+++|++........ ...+.+|+..++.+ +|++++++++.+......+++|||+.+++|..+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 589999999998899999999876543221 56888999999999 599999999999988999999999999999999
Q ss_pred Hc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 861 LH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 861 l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+. ..++...+..++.+++.++.|||+.||+|+||+|.||+++.++.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~ 127 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVK 127 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEE
Confidence 87 3489999999999999999999999999999999999999887653
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >TIGR02865 spore_II_E stage II sporulation protein E | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.5e-12 Score=152.13 Aligned_cols=207 Identities=21% Similarity=0.196 Sum_probs=137.5
Q ss_pred eeCCCeeEEEEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcChHH---HHHHHHHHHHHHHHhcCCc
Q 002560 88 VPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQ---CSQFVKRKLCENLLRNNKF 164 (908)
Q Consensus 88 ~~~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~---as~~~~~~l~~~l~~~~~~ 164 (908)
.+..++.+.++++...- ..+..+.|.|.+.. .+++...++|+|||| +|.. +|..+.+.+.+.+....
T Consensus 545 ~e~~~~~~~~g~a~~~k----~g~~vsGD~y~~~~---l~~g~~~~~laDGmG-hG~~Aa~~S~~~~~ll~~~~~~g~-- 614 (764)
T TIGR02865 545 EETPKYHVSTGVARAAK----DGELVSGDSYSFGK---LSAGKYAVAISDGMG-SGPEAAQESSACVRLLEKFLESGF-- 614 (764)
T ss_pred ecCCceeehhhHHHhcC----CCCcccCceEEEEE---ECCCEEEEEEEcccC-CCHHHHHHHHHHHHHHHHHHHcCC--
Confidence 45556666665542221 24788999987754 234557899999999 3333 34444444433332221
Q ss_pred chhHHHHHHHHHHHHHHHHHhccCCCCCCcceEEEEEEE--CCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChh
Q 002560 165 HEDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR--GRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFRED 242 (908)
Q Consensus 165 ~~~~~~~l~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~ 242 (908)
+ ...++..+|+.+.... ...+++|+.+++++ .+++.++|+|+++.|+.|++. ...++..+-|
T Consensus 615 --~----~~~ai~~lN~~L~~~~--~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~----v~~i~s~~lP---- 678 (764)
T TIGR02865 615 --D----REVAIKTVNSILSLRS--TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAK----VEVIRSSNLP---- 678 (764)
T ss_pred --C----HHHHHHHHHHHHHhCC--CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCE----EEEecCCCce----
Confidence 1 2456677888776542 23468999999996 789999999999999987643 2333322111
Q ss_pred HHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeC
Q 002560 243 ELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELT 322 (908)
Q Consensus 243 E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~ 322 (908)
+|-. -..+++....++.
T Consensus 679 ---------------------------------------------------------lGil------~~~~~~~~~~~L~ 695 (764)
T TIGR02865 679 ---------------------------------------------------------IGIL------DEVDVELVRKKLK 695 (764)
T ss_pred ---------------------------------------------------------eEec------cCCccceEEEEeC
Confidence 1100 1135677788999
Q ss_pred CCCCEEEEEcCccccccChHH-----HHHHHhc--cCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEc
Q 002560 323 NDHPFFVLASDGVFEFLSSQA-----VVDMVAK--YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHI 386 (908)
Q Consensus 323 ~~d~flvlaSDGl~d~l~~~e-----i~~~v~~--~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~ 386 (908)
+||. |||+|||+||..++.+ +.+++.. ..+|++.++.|++++.+.. .+...||+|++++++
T Consensus 696 ~GD~-Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~--~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 696 NGDL-IVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELR--SGKIKDDMTVIVAKV 763 (764)
T ss_pred CCCE-EEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc--CCCCCCCeEEEEEEe
Confidence 9998 7999999999887543 6667754 3589999999999998652 123489999999986
|
Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs. |
| >cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-12 Score=120.54 Aligned_cols=112 Identities=35% Similarity=0.516 Sum_probs=102.4
Q ss_pred cccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhh
Q 002560 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALM 559 (908)
Q Consensus 480 ~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll 559 (908)
+|..|+++.+..|++.++.+.|++|++|+.+|++.+.+|+|++|.++++....+|++.....+ .+|++||+..++
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~-----~~g~~~g~~~~~ 75 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFL-----GPGDLFGELALL 75 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEec-----CCccCcChHHHh
Confidence 578999999999999999999999999999999999999999999999999888766554443 789999999999
Q ss_pred cCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHH
Q 002560 560 YNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 560 ~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~ 596 (908)
.+.++..+++|.++|.+|.|+++.|.+++.+++....
T Consensus 76 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~ 112 (115)
T cd00038 76 GNGPRSATVRALTDSELLVLPRSDFRRLLQEYPELAR 112 (115)
T ss_pred cCCCCCceEEEcCceEEEEEeHHHHHHHHHHCcHhHH
Confidence 8899999999999999999999999999999886553
|
In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of |
| >PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.5e-12 Score=132.95 Aligned_cols=110 Identities=21% Similarity=0.249 Sum_probs=100.2
Q ss_pred cCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcC
Q 002560 482 RKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561 (908)
Q Consensus 482 ~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~ 561 (908)
+.+++++++.+++.+..+.|++|++|+.+|++++++|||++|.++++..+.+|++....++ ++|++||+.+++.+
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~-----~~g~~~g~~~~~~~ 80 (211)
T PRK11753 6 KPQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYL-----NQGDFIGELGLFEE 80 (211)
T ss_pred CCCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEc-----CCCCEEeehhhccC
Confidence 4689999999999999999999999999999999999999999999998888877654444 89999999999886
Q ss_pred C-CceeEEEEccceEEEEEeHHHHHHHHhhhhhhHH
Q 002560 562 K-PLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 562 ~-~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~ 596 (908)
. ++.++++|.++|.++.|++++|.+++.++|....
T Consensus 81 ~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~ 116 (211)
T PRK11753 81 GQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILM 116 (211)
T ss_pred CCCceEEEEEcCcEEEEEEcHHHHHHHHHHCHHHHH
Confidence 4 7889999999999999999999999999997653
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.8e-13 Score=154.36 Aligned_cols=121 Identities=14% Similarity=0.211 Sum_probs=102.6
Q ss_pred EEEecCCCeEE-EEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 774 RKCLYSTDCSE-IGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 774 ~~~LG~G~~g~-V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
.+.+|.|+.|+ ||++.. .++.||||.+-... .....+|+..|+.-..||||+++|+.-.+..++||..|.|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY--EGREVAVKRLLEEF------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred HHHcccCCCCcEEEEEee--CCceehHHHHhhHh------HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 35688999875 688877 57899999875433 3467799999999988999999999999999999999999
Q ss_pred CCCcHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 853 LACPLASILHTP------LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 853 ~gg~L~~~l~~~------l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
.++|.+++... ......+....|++.||.+||+.+||||||||.||||+.
T Consensus 586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~ 641 (903)
T KOG1027|consen 586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISV 641 (903)
T ss_pred -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEc
Confidence 58999999832 111445788999999999999999999999999999986
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.8e-13 Score=134.98 Aligned_cols=123 Identities=12% Similarity=0.078 Sum_probs=92.1
Q ss_pred EecCCCeEEEEEEEECCCCceEEEeeechhhhh-----ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 776 CLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK-----CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
.||+|+||.||++.. .+..+++|........ ......++.+|..++..+. +++++.....+.+....+++||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 389999999999984 5678999985432211 1112356788999999985 5544333333345556789999
Q ss_pred cCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 851 TYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
|++|++|.+++...- . .++.+++.+|.+||+.|++|+|++|.|||++ ++.+
T Consensus 78 ~~~g~~l~~~~~~~~--~---~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~ 128 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN--D---ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKL 128 (199)
T ss_pred EECCccHHHHHhhcH--H---HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcE
Confidence 999999998876211 1 7899999999999999999999999999998 5543
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.1e-13 Score=135.52 Aligned_cols=128 Identities=13% Similarity=0.087 Sum_probs=96.6
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--cc-----------------chHHHHHHHHHHHHhcCCCC-
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CL-----------------GKEVQVLKEKNLMKSVSPSA- 830 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~-----------------~~~~~~~~E~~il~~l~~~~- 830 (908)
|.+.+.||+|+||.||++... +++.+|+|++...... .. ........|..++..+. ++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence 777889999999999999875 7999999987643200 00 01123567888888884 44
Q ss_pred -ccceeeeeeccCCeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 831 -CVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 831 -~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++..+. ....+++|||++|++|..+... .....++.+++.++.++|++||+||||||+||+++.++.+|
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 4444443 2345899999999998765431 34567889999999999999999999999999999887653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.6e-13 Score=153.51 Aligned_cols=136 Identities=13% Similarity=0.145 Sum_probs=116.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
...+..++||+|+||+||++.+-..++ +||+|++..... ...-..++.|.-+|.++. |||++++++++....
T Consensus 696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~--~~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~- 771 (1177)
T KOG1025|consen 696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS--PKASIELLDEALRMASLD-HPNLLRLLGVCMLST- 771 (1177)
T ss_pred hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC--chhhHHHHHHHHHHhcCC-CchHHHHhhhcccch-
Confidence 345556899999999999998765554 788888765443 334567999999999995 999999999987765
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+-||++|+++|.|.++++ ..+-......|..||++|+.|||.++++||||-..|+|+..-.++|
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvk 838 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVK 838 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEE
Confidence 889999999999999998 6788899999999999999999999999999999999998877765
|
|
| >PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.5e-12 Score=114.66 Aligned_cols=91 Identities=27% Similarity=0.443 Sum_probs=83.0
Q ss_pred EEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccceEEE
Q 002560 498 RVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLW 577 (908)
Q Consensus 498 ~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~~~l~ 577 (908)
.++|++|++|+++|+.++.+|||++|.++++..+.+++..+...+ .+|++||+.+++.+.++.++++|.++|.+|
T Consensus 1 ~~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~-----~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~ 75 (91)
T PF00027_consen 1 EKTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFL-----GPGDIFGEIELLTGKPSPFTVIALTDSEVL 75 (91)
T ss_dssp -EEESTTEEEEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEE-----ETTEEESGHHHHHTSBBSSEEEESSSEEEE
T ss_pred CeEECCCCEEEeCCCcCCEEEEEEECceEEEeceecceeeeecce-----eeeccccceeecCCCccEEEEEEccCEEEE
Confidence 368999999999999999999999999999999988876544444 789999999999999999999999999999
Q ss_pred EEeHHHHHHHHhhhhh
Q 002560 578 ALKREDFRGILMSEFS 593 (908)
Q Consensus 578 ~i~~~~f~~ll~~~~~ 593 (908)
.|++++|.+++.++|+
T Consensus 76 ~i~~~~~~~~~~~~p~ 91 (91)
T PF00027_consen 76 RIPREDFLQLLQQDPE 91 (91)
T ss_dssp EEEHHHHHHHHHHSHH
T ss_pred EEeHHHHHHHHHhCcC
Confidence 9999999999999874
|
The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B .... |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.2e-12 Score=152.08 Aligned_cols=127 Identities=13% Similarity=0.064 Sum_probs=97.1
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhh-----hhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQK-----VKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~-----~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
|...+.||+|+||.||++.+... .+++|+..... .........+.+|..++..++ |++++..+.++.+....
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEeCCCC
Confidence 45578899999999999987543 33444321111 111123456889999999995 78887776666666778
Q ss_pred EEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 846 GLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
+++|||++|++|.+++. ....++.+++.+|.|||++||+||||||+|||++ ++.+
T Consensus 412 ~lv~E~~~g~~L~~~l~------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~~~~ 466 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-DDRL 466 (535)
T ss_pred EEEEEecCCCcHHHHHH------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-CCcE
Confidence 99999999999999875 4567899999999999999999999999999994 4443
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.2e-12 Score=130.55 Aligned_cols=128 Identities=12% Similarity=0.088 Sum_probs=87.5
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHH---------------------HHHHHHHHHHhcCCC-Cc
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEV---------------------QVLKEKNLMKSVSPS-AC 831 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~---------------------~~~~E~~il~~l~~~-~~ 831 (908)
.+.||+|+||.||++.+. +++.+|+|++............ ....|...+..+.++ ..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999886 7899999998653221111111 113455566665322 23
Q ss_pred cceeeeeeccCCeEEEEEecCCCCcHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCcc
Q 002560 832 VPQILCTCADSMHAGLLLNTYLACPLAS-ILHTPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 832 i~~~~~~~~~~~~~~iv~e~~~gg~L~~-~l~~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~v 907 (908)
+++.+.. ...+++|||++++++.. .+........++.++.+++.++.++|. +||+||||||+|||++ ++.+
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~ 153 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKV 153 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcE
Confidence 4555443 23589999999854322 111111116788999999999999999 9999999999999998 6554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.5e-12 Score=153.61 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=109.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeee
Q 002560 762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTC 839 (908)
Q Consensus 762 ~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~ 839 (908)
....+.-..|.|.+.||+|+||.||+|...+ ++.+|||+-+.....+.-.- ..++.+|+ --+.|+.++..+
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~------~q~~~RLk~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYIC------LQVMERLKPQMLPSIMHISSAH 763 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeeh------HHHHHhhchhhhcchHHHHHHH
Confidence 3445567789999999999999999999887 99999998765543332111 12223331 124566777777
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 840 ADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
...+..++|+||.+.|+|.++++ +.+++..+.+++.|++.-++.||..+|||+||||+|+||..
T Consensus 764 ~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~ 829 (974)
T KOG1166|consen 764 VFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRR 829 (974)
T ss_pred ccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeec
Confidence 77788899999999999999998 78999999999999999999999999999999999999964
|
|
| >PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-11 Score=130.07 Aligned_cols=117 Identities=14% Similarity=0.141 Sum_probs=100.3
Q ss_pred HhcCccccCCCHHHHHHHhhcce-EEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcc
Q 002560 475 LHDHFLFRKLTDSQCHVLLDCMQ-RVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSF 553 (908)
Q Consensus 475 l~~~~~f~~L~~~~l~~l~~~~~-~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~f 553 (908)
++..+.|..|++++++.|..... .+.|++|++|+++||+++++|+|++|.++++..+.+|++.+..++ .||++|
T Consensus 15 ~~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~-----~~gd~~ 89 (235)
T PRK11161 15 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH-----LAGDLV 89 (235)
T ss_pred ccccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECCCCCEEEEEec-----cCCcee
Confidence 34455555799999999999886 578999999999999999999999999999999998887665554 789999
Q ss_pred hhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHHH
Q 002560 554 GELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 554 Ge~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~ 597 (908)
|+.+++. .++..+++|+++++++.|+++.|++++.++|.....
T Consensus 90 g~~~~~~-~~~~~~~~a~~~~~i~~ip~~~f~~l~~~~p~~~~~ 132 (235)
T PRK11161 90 GFDAIGS-GQHPSFAQALETSMVCEIPFETLDDLSGKMPKLRQQ 132 (235)
T ss_pred ccccccC-CCCcceEEEeccEEEEEEEHHHHHHHHHHChHHHHH
Confidence 9977654 455678999999999999999999999999976543
|
|
| >PRK10402 DNA-binding transcriptional activator YeiL; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.1e-11 Score=129.33 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=100.2
Q ss_pred HHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCC
Q 002560 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL 550 (908)
Q Consensus 471 i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G 550 (908)
+...+.++-+-+-+.. .|.+.+..+.|++|++|+.+|++++.+|+|++|.|+++..+.+|++.+..++ .||
T Consensus 10 ~~~~~~~~~~~~~~~~----~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~-----~~g 80 (226)
T PRK10402 10 ISHYMSESAFKDCFSF----DVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFF-----AAP 80 (226)
T ss_pred HHHHHHHcChhhcCCH----HHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeec-----CCC
Confidence 4445555544333443 4777888999999999999999999999999999999999999988766555 889
Q ss_pred CcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHH
Q 002560 551 SSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 551 ~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~ 596 (908)
++||+.+++.+.++.++++|+++|+++.|+++.|.+++..+|....
T Consensus 81 ~~~G~~~~~~~~~~~~~~~A~~~~~i~~i~~~~~~~ll~~~p~~~~ 126 (226)
T PRK10402 81 CFIGEIELIDKDHETKAVQAIEECWCLALPMKDCRPLLLNDALFLR 126 (226)
T ss_pred CeEEeehhhcCCCCCccEEEeccEEEEEEEHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999999999999999999999997654
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-11 Score=152.93 Aligned_cols=121 Identities=21% Similarity=0.259 Sum_probs=108.0
Q ss_pred HHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCC
Q 002560 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEK 549 (908)
Q Consensus 470 ~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~ 549 (908)
....+++++++|++++++.+..|+..++.+.|++||.|+.+|+.++.+|||.+|.|+++.. .++++.+.. .+++
T Consensus 371 l~~~~l~~~~lF~~~s~~~l~~L~~~~~~~~~~pge~I~~qge~~~~lY~I~~G~V~i~~~-~~~~e~~l~-----~l~~ 444 (823)
T PLN03192 371 LFLPVVEKVYLFKGVSREILLLLVTKMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIIDS-EGEKERVVG-----TLGC 444 (823)
T ss_pred HHHHHHhhCcchhcCCHHHHHHHHHhhheeeeCCCCEEEECCCCCceEEEEEecEEEEEEe-cCCcceeeE-----EccC
Confidence 3456789999999999999999999999999999999999999999999999999999863 344544433 3489
Q ss_pred CCcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHH
Q 002560 550 LSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 550 G~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~ 596 (908)
|++|||.+++.+.|++++++|.+.|.++.|++++|.++++++|....
T Consensus 445 Gd~FGE~~~l~~~p~~~t~ra~~~s~ll~l~~~~f~~ll~~~p~d~~ 491 (823)
T PLN03192 445 GDIFGEVGALCCRPQSFTFRTKTLSQLLRLKTSTLIEAMQTRQEDNV 491 (823)
T ss_pred CCEecchHHhcCCCCCCeEEEcccEEEEEEEHHHHHHHHHHhhHHHH
Confidence 99999999999999999999999999999999999999999987543
|
|
| >smart00100 cNMP Cyclic nucleotide-monophosphate binding domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-11 Score=112.86 Aligned_cols=111 Identities=30% Similarity=0.480 Sum_probs=99.6
Q ss_pred cccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhh
Q 002560 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALM 559 (908)
Q Consensus 480 ~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll 559 (908)
+|.+++++.+..++..+..+.|++|++|+++|++.+.+|+|.+|.++++..+.+|++.....+ .+|++||+..++
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~-----~~g~~~g~~~~~ 75 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGIL-----GPGDFFGELALL 75 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEee-----cCCceechhhhc
Confidence 578999999999999999999999999999999999999999999999998877776554444 889999999998
Q ss_pred --cCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhH
Q 002560 560 --YNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNL 595 (908)
Q Consensus 560 --~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~ 595 (908)
...+...++.|.++|.++.++.+.|...+...+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 113 (120)
T smart00100 76 TNSRRAASATAVALELATLLRIDFRDFLQLLQENPQLL 113 (120)
T ss_pred cCCCcccceEEEEEeeEEEEccCHHHHHHHHHHhHHHH
Confidence 457889999999999999999999999998887643
|
Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases. |
| >COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.6e-11 Score=126.81 Aligned_cols=114 Identities=25% Similarity=0.343 Sum_probs=102.4
Q ss_pred hcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchh
Q 002560 476 HDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGE 555 (908)
Q Consensus 476 ~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe 555 (908)
...+.|..++.+.+..+......+.|++|++|+++|++++.+|+|++|.++++...++|++.+..++ ++|++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~-----~~g~~fg~ 77 (214)
T COG0664 3 KENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTEDGREIILGFL-----GPGDFFGE 77 (214)
T ss_pred ccccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEe-----cCCchhhh
Confidence 3456677788888888888899999999999999999999999999999999999999887766655 89999999
Q ss_pred hhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhh
Q 002560 556 LALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN 594 (908)
Q Consensus 556 ~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~ 594 (908)
.+++.+.|++++++|+++|++|.++++.|.+++.+.|..
T Consensus 78 ~~l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~p~l 116 (214)
T COG0664 78 LALLGGDPRSASAVALTDVEVLEIPRKDFLELLAESPKL 116 (214)
T ss_pred HHHhcCCCccceEEEcceEEEEEecHHHHHHHHhhCcHH
Confidence 999999999999999999999999999999999884443
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-11 Score=133.44 Aligned_cols=132 Identities=23% Similarity=0.338 Sum_probs=117.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|.+.+.||.|+||.||++.+. ..+++|.+.+...........+.+|..++..+.+++++++++..+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788999999999999999987 78899998876654434577899999999999755589999999988888899999
Q ss_pred cCCCCcHHHHHc-C----CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 851 TYLACPLASILH-T----PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 851 ~~~gg~L~~~l~-~----~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
++.++++.+++. . .++......++.|++.++.|+|+.|++|||+||+|||++..+
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~ 138 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDG 138 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCC
Confidence 999999997777 2 699999999999999999999999999999999999999876
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=129.45 Aligned_cols=126 Identities=16% Similarity=0.231 Sum_probs=91.9
Q ss_pred EEec-CCCeEEEEEEEECCCCceEEEeeechhhh----h------ccchHHHHHHHHHHHHhcCCCCc--cceeeeeecc
Q 002560 775 KCLY-STDCSEIGLVLLRDSENFLSLKRFSKQKV----K------CLGKEVQVLKEKNLMKSVSPSAC--VPQILCTCAD 841 (908)
Q Consensus 775 ~~LG-~G~~g~V~~~~~~~~~~~~alK~~~~~~~----~------~~~~~~~~~~E~~il~~l~~~~~--i~~~~~~~~~ 841 (908)
..|| .|+.|+||.+... +..+++|.+..... . .......+.+|..++..+. +++ ++..+.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARVV 113 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeeee
Confidence 3466 7778888888763 67899998754221 0 1123456788999999995 555 4666655332
Q ss_pred -CCe---EEEEEecCCC-CcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 842 -SMH---AGLLLNTYLA-CPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 842 -~~~---~~iv~e~~~g-g~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
... .++|||+++| .+|.+++. ..+++.. +.+++.+|.+||++||+||||||+|||++.++.+
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v 181 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEAPLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKF 181 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcCCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCE
Confidence 222 3599999997 69998887 5566543 5789999999999999999999999999987754
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-11 Score=147.03 Aligned_cols=140 Identities=13% Similarity=0.170 Sum_probs=121.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC---C----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD---S----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~---~----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.-+++++.+.||+|.||.|+++.... . ...+|+|.++..... .....+..|+.+|+.+.+||||+.+.+.+
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 34555667799999999999997431 1 347899988765433 46778999999999998899999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc-CC-----------------CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE
Q 002560 840 ADSMHAGLLLNTYLACPLASILH-TP-----------------LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~-~~-----------------l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi 901 (908)
.....+++++||+..|+|..+|+ .+ ++......++.||+.|++||++..+|||||-..|||+
T Consensus 372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI 451 (609)
T ss_pred ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe
Confidence 99999999999999999999998 45 8899999999999999999999999999999999999
Q ss_pred cCCCccC
Q 002560 902 DKSGHLQ 908 (908)
Q Consensus 902 ~~~g~vK 908 (908)
..+..+|
T Consensus 452 ~~~~~~k 458 (609)
T KOG0200|consen 452 TKNKVIK 458 (609)
T ss_pred cCCCEEE
Confidence 9886554
|
|
| >PLN02868 acyl-CoA thioesterase family protein | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.6e-11 Score=135.80 Aligned_cols=115 Identities=22% Similarity=0.271 Sum_probs=101.6
Q ss_pred HHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecC
Q 002560 469 AHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAE 548 (908)
Q Consensus 469 ~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~ 548 (908)
+.+..+|+++++|++|++++++.|+..++.++|++|++|+++|+.++.+|||++|.|+++..+.+| +.+ ...++
T Consensus 4 ~~~~~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~g-e~~-----l~~l~ 77 (413)
T PLN02868 4 ESVVEFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEE-SRP-----EFLLK 77 (413)
T ss_pred HHHHHHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCC-cEE-----EEEeC
Confidence 346678999999999999999999999999999999999999999999999999999999988766 332 23448
Q ss_pred CCCcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhh
Q 002560 549 KLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSE 591 (908)
Q Consensus 549 ~G~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~ 591 (908)
+|++||+. +.+.++.++++|.++|+++.|+++.|..+....
T Consensus 78 ~Gd~fG~~--l~~~~~~~~~~A~~d~~v~~ip~~~~~~~~~~~ 118 (413)
T PLN02868 78 RYDYFGYG--LSGSVHSADVVAVSELTCLVLPHEHCHLLSPKS 118 (413)
T ss_pred CCCEeehh--hCCCCcccEEEECCCEEEEEEcHHHHhhhcccc
Confidence 99999975 688999999999999999999999988776443
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-11 Score=118.75 Aligned_cols=123 Identities=17% Similarity=0.155 Sum_probs=101.3
Q ss_pred EEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC-CccceeeeeeccCCeEEEEEec
Q 002560 773 WRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS-ACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 773 ~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~-~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+++.||.|.++.||++.... ..+++|....... ...+..|..++..+.++ +.+++++..+...+..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35789999999999999854 7899998765432 35678899999999644 6889999888888899999999
Q ss_pred CCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CcEecCCCCCcEEEcCCCcc
Q 002560 852 YLACPLASILHTPLDEQSARFCAASVVAALEDLHKR---GVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 852 ~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~---gIiHrDIKp~NILi~~~g~v 907 (908)
++|..+..+ +......++.+++.+|.+||.. +++|+|++|+|||+++.+.+
T Consensus 75 ~~g~~~~~~-----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~ 128 (155)
T cd05120 75 IEGETLDEV-----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKIL 128 (155)
T ss_pred cCCeecccC-----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEE
Confidence 988777543 5566777899999999999985 79999999999999986654
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK09392 ftrB transcriptional activator FtrB; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-11 Score=129.95 Aligned_cols=120 Identities=13% Similarity=0.110 Sum_probs=109.8
Q ss_pred HHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCcccc
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED 676 (908)
Q Consensus 597 ~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~ 676 (908)
...+++..++|..++..++..+........|++|++|+++|+..+++|+|.+|.++++...+
T Consensus 5 ~~~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~~------------------ 66 (236)
T PRK09392 5 DLIRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASSQ------------------ 66 (236)
T ss_pred HHHHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcCC------------------
Confidence 34688999999999999999999999999999999999999999999999999999986433
Q ss_pred CCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCccccccc
Q 002560 677 DGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 677 ~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+++..+..+.+|++||+.+++++.++.++++|.++++++.|++++|.+++...+.+..
T Consensus 67 ----~~~~~i~~~~~g~~~g~~~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~ 124 (236)
T PRK09392 67 ----DRETTLAILRPVSTFILAAVVLDAPYLMSARTLTRSRVLMIPAELVREAMSEDPGFMR 124 (236)
T ss_pred ----CceEEEEEeCCCchhhhHHHhCCCCCceEEEEcCceEEEEEeHHHHHHHHHHCHHHHH
Confidence 3466889999999999999999999999999999999999999999999988777554
|
|
| >PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.9e-10 Score=114.02 Aligned_cols=181 Identities=22% Similarity=0.249 Sum_probs=110.0
Q ss_pred CCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhccCCCCCCcceEEEEEEE--CC
Q 002560 128 QDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR--GR 205 (908)
Q Consensus 128 ~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~--~~ 205 (908)
++..+++|+|++| ||..||-+ ...+...+........+ ..+.+..+|+.+....... .+++|++++.+. .+
T Consensus 2 ~~~~~~~v~D~~G-hG~~aa~~-~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~-~~~~t~~~~~~d~~~~ 74 (193)
T PF07228_consen 2 DGRYFIIVGDVSG-HGVSAALL-SAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD-NRYATACYAIIDPETG 74 (193)
T ss_dssp TTEEEEEEEEESS-SSHHHHHH-HHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT-STTEEEEEEEEETTTT
T ss_pred CCEEEEEEEEecC-CCHHHHHH-HHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc-cccceEEEEEecccce
Confidence 3557899999998 44433322 22233322221111111 3445567777775442222 357888888876 78
Q ss_pred EEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCcee
Q 002560 206 TIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLW 285 (908)
Q Consensus 206 ~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~ 285 (908)
+++++|+|++++++++.++... ..+....
T Consensus 75 ~l~~~~aG~~~~l~~~~~~~~~--~~~~~~~------------------------------------------------- 103 (193)
T PF07228_consen 75 TLTYANAGHPPPLLLRPGGREI--EQLESEG------------------------------------------------- 103 (193)
T ss_dssp EEEEEEESSSEEEEEETTCTEE--EEETCSS-------------------------------------------------
T ss_pred EEEEeCCCCCCEEEEeccccce--eecccCc-------------------------------------------------
Confidence 8999999999999999754221 1111110
Q ss_pred ccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEEEEcCccccccChH-------HHHHHHhc--cCCHHH
Q 002560 286 VPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQ-------AVVDMVAK--YKDPRD 356 (908)
Q Consensus 286 ~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~-------ei~~~v~~--~~~~~~ 356 (908)
-.+|-. ...++....+++.++|. |+|+||||+|....+ .+.+++.+ ..++++
T Consensus 104 ------------~~lG~~------~~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 164 (193)
T PF07228_consen 104 ------------PPLGIF------EDIDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQE 164 (193)
T ss_dssp ------------BBCSSS------CTTCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHH
T ss_pred ------------cceeee------ccccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHH
Confidence 002211 11355667889999999 799999999998433 34566663 357888
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEEEEcC
Q 002560 357 ACAAIVAESYRLWLQYETRTDDITVIVVHIN 387 (908)
Q Consensus 357 ~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~ 387 (908)
.++.|++.+... ......||+|+++++++
T Consensus 165 ~~~~l~~~~~~~--~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 165 IIDALLEAIDRF--GKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp HHHHHHHHHHHH--TTSSTSS-EEEEEEEE-
T ss_pred HHHHHHHHHHHh--cCCCCCCceEEEEEEEC
Confidence 888888888762 23457899999999874
|
pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B .... |
| >KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.4e-11 Score=141.28 Aligned_cols=119 Identities=19% Similarity=0.220 Sum_probs=107.6
Q ss_pred HHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCC
Q 002560 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL 550 (908)
Q Consensus 471 i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G 550 (908)
..++++++|+|+++++.-+..|+..++...|.+|++|++|||+.+.||||.+|.+++...+.+| +.....+++|
T Consensus 417 ~~~lv~~vpLF~~md~~~L~al~~rlk~~~f~pge~iireGd~v~~myFI~rG~le~~~~~~g~------~~~~~~L~~G 490 (727)
T KOG0498|consen 417 CLDLVRKVPLFAGMDDGLLDALCSRLKPEYFTPGEYIIREGDPVTDMYFIVRGSLESITTDGGG------FFVVAILGPG 490 (727)
T ss_pred hHHHHhhCchhhcCCHHHHHHHHHHhhhhccCCCCeEEecCCccceeEEEEeeeEEEEEccCCc------eEEEEEecCC
Confidence 4678999999999999999999999999999999999999999999999999999998877543 2345567999
Q ss_pred Ccch-hhhhhcC-CCceeEEEEccceEEEEEeHHHHHHHHhhhhhhH
Q 002560 551 SSFG-ELALMYN-KPLQASVRAVTNGMLWALKREDFRGILMSEFSNL 595 (908)
Q Consensus 551 ~~fG-e~sll~~-~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~ 595 (908)
|+|| |+.+... .|.++||+|++.|+++.|++++|..++...+...
T Consensus 491 d~~GeEl~~~~~~~p~t~TVralt~~el~~L~~~dL~~V~~~f~~~~ 537 (727)
T KOG0498|consen 491 DFFGEELLTWCLDLPQTRTVRALTYCELFRLSADDLKEVLQQFRRLG 537 (727)
T ss_pred CccchHHHHHHhcCCCCceeehhhhhhHHhccHHHHHHHHHHhHHHH
Confidence 9999 8888877 8999999999999999999999999999988543
|
|
| >PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.6e-11 Score=108.10 Aligned_cols=90 Identities=21% Similarity=0.359 Sum_probs=81.2
Q ss_pred ccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhccc
Q 002560 624 EVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGE 703 (908)
Q Consensus 624 ~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~ 703 (908)
+++|++|++|+++|+..+.+|+|++|.+++..... .+....+..+.+|++||+.+++.+
T Consensus 1 ~~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~---------------------~~~~~~~~~~~~g~~~g~~~~~~~ 59 (91)
T PF00027_consen 1 EKTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINE---------------------DGKEQIIFFLGPGDIFGEIELLTG 59 (91)
T ss_dssp -EEESTTEEEEETTSBESEEEEEEESEEEEEEETT---------------------TSEEEEEEEEETTEEESGHHHHHT
T ss_pred CeEECCCCEEEeCCCcCCEEEEEEECceEEEecee---------------------cceeeeecceeeeccccceeecCC
Confidence 36799999999999999999999999999988765 344557899999999999999999
Q ss_pred CcccceEeecCceEEEEecccccccccCccc
Q 002560 704 HMGSLTAVAVDDVVCAILTKEKFDLVVGPLT 734 (908)
Q Consensus 704 ~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~ 734 (908)
.++.++++|.++++++.|++++|.+++...|
T Consensus 60 ~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~p 90 (91)
T PF00027_consen 60 KPSPFTVIALTDSEVLRIPREDFLQLLQQDP 90 (91)
T ss_dssp SBBSSEEEESSSEEEEEEEHHHHHHHHHHSH
T ss_pred CccEEEEEEccCEEEEEEeHHHHHHHHHhCc
Confidence 9999999999999999999999999887654
|
The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B .... |
| >cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.1e-11 Score=108.04 Aligned_cols=111 Identities=28% Similarity=0.415 Sum_probs=100.9
Q ss_pred hhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCcccee
Q 002560 606 LLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKEL 685 (908)
Q Consensus 606 ~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (908)
+|..++...+..+...++...|.+|++|+.+|+..+.+|+|.+|.++++.... ++.+..
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~---------------------~g~~~~ 59 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDE---------------------DGREQI 59 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECC---------------------CCcEEE
Confidence 36788999999999999999999999999999999999999999999987654 356778
Q ss_pred eeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCcccccc
Q 002560 686 SVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS 737 (908)
Q Consensus 686 v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~ 737 (908)
+..+.+|++||+.+++.+.++.++++|.+++.++.|++++|.+++...+.+.
T Consensus 60 ~~~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~ 111 (115)
T cd00038 60 VGFLGPGDLFGELALLGNGPRSATVRALTDSELLVLPRSDFRRLLQEYPELA 111 (115)
T ss_pred EEecCCccCcChHHHhcCCCCCceEEEcCceEEEEEeHHHHHHHHHHCcHhH
Confidence 9999999999999999889999999999999999999999999988776654
|
In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.2e-12 Score=141.15 Aligned_cols=132 Identities=21% Similarity=0.287 Sum_probs=116.8
Q ss_pred EecCCCeEEEEEEEE---CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 776 CLYSTDCSEIGLVLL---RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~---~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
.+|.|+||.|++|+- ...+..||+|++++......... +...|..++..++.||++++++..|+.+..+|+++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999999854 34678999999987665443333 77788899999877999999999999999999999999
Q ss_pred CCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 853 LACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 853 ~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.||+|+..+. ..+.+...+.+.++++.+++++|+.||+|||+|++||+++.+|++|
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~ 137 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIK 137 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccc
Confidence 9999999887 6789999999999999999999999999999999999999999886
|
|
| >COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-10 Score=125.82 Aligned_cols=119 Identities=19% Similarity=0.269 Sum_probs=107.5
Q ss_pred HHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCC
Q 002560 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL 550 (908)
Q Consensus 471 i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G 550 (908)
+.++++.+|+|+.|++++++.|...+....|++||+|+..|.+..++|+|.+|.|+++..+. + ++..+ ..|
T Consensus 5 ~~~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~~~g--~-----v~~~~--~~g 75 (610)
T COG2905 5 PDQFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRSDGG--E-----VLDRL--AAG 75 (610)
T ss_pred HHHHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEcCCC--e-----eeeee--ccC
Confidence 57899999999999999999999999999999999999999999999999999999986543 2 23322 569
Q ss_pred CcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHHHH
Q 002560 551 SSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSL 598 (908)
Q Consensus 551 ~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~~ 598 (908)
+.||-.+|+...+...+..|++|+.+|.|+++.|.+++.++|.+..++
T Consensus 76 dlFg~~~l~~~~~~~~~~~aeedsl~y~lp~s~F~ql~~~n~~f~~ff 123 (610)
T COG2905 76 DLFGFSSLFTELNKQRYMAAEEDSLCYLLPKSVFMQLMEENPEFADFF 123 (610)
T ss_pred ccccchhhcccCCCcceeEeeccceEEecCHHHHHHHHHhCcHHHHHH
Confidence 999999999999999999999999999999999999999999877665
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-10 Score=142.72 Aligned_cols=117 Identities=17% Similarity=0.134 Sum_probs=107.5
Q ss_pred HHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCcccc
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED 676 (908)
Q Consensus 597 ~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~ 676 (908)
+..+++++++|+.++...+..|+..++.+.|.+|+.|+.||+.++.+|||.+|+|++....+
T Consensus 372 ~~~~l~~~~lF~~~s~~~l~~L~~~~~~~~~~pge~I~~qge~~~~lY~I~~G~V~i~~~~~------------------ 433 (823)
T PLN03192 372 FLPVVEKVYLFKGVSREILLLLVTKMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIIDSEG------------------ 433 (823)
T ss_pred HHHHHhhCcchhcCCHHHHHHHHHhhheeeeCCCCEEEECCCCCceEEEEEecEEEEEEecC------------------
Confidence 34678999999999999999999999999999999999999999999999999999975332
Q ss_pred CCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCcccc
Q 002560 677 DGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTK 735 (908)
Q Consensus 677 ~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~ 735 (908)
+.+..+..+++|++|||.+++.+.|++++++|.+.++++.|++++|.+++...++
T Consensus 434 ----~~e~~l~~l~~Gd~FGE~~~l~~~p~~~t~ra~~~s~ll~l~~~~f~~ll~~~p~ 488 (823)
T PLN03192 434 ----EKERVVGTLGCGDIFGEVGALCCRPQSFTFRTKTLSQLLRLKTSTLIEAMQTRQE 488 (823)
T ss_pred ----CcceeeEEccCCCEecchHHhcCCCCCCeEEEcccEEEEEEEHHHHHHHHHHhhH
Confidence 3466789999999999999999999999999999999999999999999987765
|
|
| >PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2e-10 Score=118.77 Aligned_cols=110 Identities=19% Similarity=0.234 Sum_probs=99.1
Q ss_pred ccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeee
Q 002560 608 SRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSV 687 (908)
Q Consensus 608 ~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 687 (908)
+.++.+++..++..+....|++|++|+.+|++.+.+|+|++|.++++.... ++++..+.
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~---------------------~g~~~~~~ 64 (211)
T PRK11753 6 KPQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDE---------------------EGKEMILS 64 (211)
T ss_pred CCCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECC---------------------CCCEEEEE
Confidence 468899999999999999999999999999999999999999999987544 46678899
Q ss_pred EcCCCCeechhhhccc-CcccceEeecCceEEEEecccccccccCccccccc
Q 002560 688 EKSEGSYFGEWTLLGE-HMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 688 ~l~~G~~FGe~all~~-~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
.+++|++||+.+++.. .++.++++|.+++.++.|++++|.+++...+.+..
T Consensus 65 ~~~~g~~~g~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~ 116 (211)
T PRK11753 65 YLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILM 116 (211)
T ss_pred EcCCCCEEeehhhccCCCCceEEEEEcCcEEEEEEcHHHHHHHHHHCHHHHH
Confidence 9999999999999886 46888999999999999999999999888777653
|
|
| >PRK09391 fixK transcriptional regulator FixK; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.8e-10 Score=116.13 Aligned_cols=98 Identities=12% Similarity=0.144 Sum_probs=85.9
Q ss_pred HhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEc
Q 002560 492 LLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAV 571 (908)
Q Consensus 492 l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~ 571 (908)
+...+..++|++|++|+.+||+++++|+|++|.|+++..+++|++.+..++ .+|++||+. .+.++.++++|+
T Consensus 34 ~~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~-----~~Gd~fG~~---~~~~~~~~~~A~ 105 (230)
T PRK09391 34 AGLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFH-----LPGDVFGLE---SGSTHRFTAEAI 105 (230)
T ss_pred ccceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEe-----cCCceeccc---CCCcCCeEEEEc
Confidence 345577899999999999999999999999999999999999987665554 789999964 466788999999
Q ss_pred cceEEEEEeHHHHHHHHhhhhhhHHH
Q 002560 572 TNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 572 ~~~~l~~i~~~~f~~ll~~~~~~~~~ 597 (908)
++|.++.|+++.|.+++.++|.....
T Consensus 106 ~ds~v~~i~~~~f~~l~~~~p~l~~~ 131 (230)
T PRK09391 106 VDTTVRLIKRRSLEQAAATDVDVARA 131 (230)
T ss_pred CceEEEEEEHHHHHHHHhhChHHHHH
Confidence 99999999999999999999976543
|
|
| >KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-10 Score=122.45 Aligned_cols=119 Identities=20% Similarity=0.263 Sum_probs=108.9
Q ss_pred HHHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccc
Q 002560 596 SSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVE 675 (908)
Q Consensus 596 ~~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~ 675 (908)
-.+..|+++++|+.-.+.-+..|...|+.+.|+||++|+++||.+...|||++|.+.|.-...
T Consensus 304 vh~dTLkkV~iF~~ce~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~dDg----------------- 366 (536)
T KOG0500|consen 304 VHLDTLKKVRIFQDCEAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVADDG----------------- 366 (536)
T ss_pred HHHHHHHhhhHHHhcchhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEEEEEecCC-----------------
Confidence 456889999999999999999999999999999999999999999999999999999976544
Q ss_pred cCCCCccceeeeEcCCCCeechhhhcc------cCcccceEeecCceEEEEecccccccccCccccccc
Q 002560 676 DDGTQSSKELSVEKSEGSYFGEWTLLG------EHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 676 ~~~~~~~~~~v~~l~~G~~FGe~all~------~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
.....+|.+|++|||.++|+ ++.|+++|++++=+.+++++|+|+.+++.++|+...
T Consensus 367 -------~t~~~~L~~G~~FGEisIlni~g~~~gNRRtanvrSvGYSDlfvLskdDl~~aL~eYP~a~~ 428 (536)
T KOG0500|consen 367 -------VTVFVTLKAGSVFGEISILNIKGNKNGNRRTANVRSVGYSDLFVLSKDDLWEALSEYPDARK 428 (536)
T ss_pred -------cEEEEEecCCceeeeeEEEEEcCcccCCcceeeeeeeccceeeEeeHHHHHHHHHhCCHHHH
Confidence 45788999999999999984 478999999999999999999999999999988554
|
|
| >TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.1e-10 Score=112.85 Aligned_cols=89 Identities=18% Similarity=0.161 Sum_probs=79.5
Q ss_pred CCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcCCC--ceeEEEEccceEEEEEeH
Q 002560 504 GDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKP--LQASVRAVTNGMLWALKR 581 (908)
Q Consensus 504 ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~~~--r~~tv~A~~~~~l~~i~~ 581 (908)
|++|+++|++++++|+|++|.|+++...++|++.+..++ +||++||+.+++.+.+ +.++++|.++|+++.|++
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~-----~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~~ 75 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALL-----RENSVFGVLSLITGHRSDRFYHAVAFTRVELLAVPI 75 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEc-----cCCCEeeeeeeccCCCCccceEEEEecceEEEEeeH
Confidence 789999999999999999999999999999988665554 8999999999998865 457899999999999999
Q ss_pred HHHHHHHhhhhhhHHH
Q 002560 582 EDFRGILMSEFSNLSS 597 (908)
Q Consensus 582 ~~f~~ll~~~~~~~~~ 597 (908)
+.|.+++.++|.....
T Consensus 76 ~~~~~l~~~~p~l~~~ 91 (193)
T TIGR03697 76 EQVEKAIEEDPDLSML 91 (193)
T ss_pred HHHHHHHHHChHHHHH
Confidence 9999999999976543
|
Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C. |
| >smart00100 cNMP Cyclic nucleotide-monophosphate binding domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.5e-10 Score=104.50 Aligned_cols=113 Identities=26% Similarity=0.374 Sum_probs=99.6
Q ss_pred hhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCcccee
Q 002560 606 LLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKEL 685 (908)
Q Consensus 606 ~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (908)
+|..++...+..++..+....|.+|++|+++|++.+++|+|.+|.++++.... .+....
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~---------------------~g~~~~ 59 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLE---------------------DGREQI 59 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECC---------------------CCceEE
Confidence 36789999999999999999999999999999999999999999999987543 355778
Q ss_pred eeEcCCCCeechhhhc--ccCcccceEeecCceEEEEecccccccccCcccccccc
Q 002560 686 SVEKSEGSYFGEWTLL--GEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHD 739 (908)
Q Consensus 686 v~~l~~G~~FGe~all--~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~~ 739 (908)
+..+.+|++||+.+++ ...+...++.+.+++.++.++.+.|...+...+.++.+
T Consensus 60 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 115 (120)
T smart00100 60 LGILGPGDFFGELALLTNSRRAASATAVALELATLLRIDFRDFLQLLQENPQLLLE 115 (120)
T ss_pred EEeecCCceechhhhccCCCcccceEEEEEeeEEEEccCHHHHHHHHHHhHHHHHH
Confidence 9999999999999998 44778899999999999999999999888777766543
|
Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases. |
| >COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.4e-10 Score=116.09 Aligned_cols=108 Identities=27% Similarity=0.349 Sum_probs=96.5
Q ss_pred chhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccc
Q 002560 604 VDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSK 683 (908)
Q Consensus 604 ~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (908)
...|..+.......++.......+++|++|+.+|++++.+|+|.+|.+++++... ++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~---------------------~G~~ 63 (214)
T COG0664 5 NPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTE---------------------DGRE 63 (214)
T ss_pred ccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECC---------------------CCcE
Confidence 3455556777777777888899999999999999999999999999999998765 4678
Q ss_pred eeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCc
Q 002560 684 ELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGP 732 (908)
Q Consensus 684 ~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~ 732 (908)
..+..+++|++||+.+++.+.++.++++|.++++++.++++.|.+++..
T Consensus 64 ~~~~~~~~g~~fg~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 112 (214)
T COG0664 64 IILGFLGPGDFFGELALLGGDPRSASAVALTDVEVLEIPRKDFLELLAE 112 (214)
T ss_pred EEEEEecCCchhhhHHHhcCCCccceEEEcceEEEEEecHHHHHHHHhh
Confidence 8899999999999999999999999999999999999999999887765
|
|
| >KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.03 E-value=3e-10 Score=132.30 Aligned_cols=120 Identities=20% Similarity=0.256 Sum_probs=108.0
Q ss_pred HHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCcccc
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED 676 (908)
Q Consensus 597 ~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~ 676 (908)
.+.+++++|+|+.+++.-+..|+..++...|.+|++|++|||..+.+|||.+|.+++.....
T Consensus 417 ~~~lv~~vpLF~~md~~~L~al~~rlk~~~f~pge~iireGd~v~~myFI~rG~le~~~~~~------------------ 478 (727)
T KOG0498|consen 417 CLDLVRKVPLFAGMDDGLLDALCSRLKPEYFTPGEYIIREGDPVTDMYFIVRGSLESITTDG------------------ 478 (727)
T ss_pred hHHHHhhCchhhcCCHHHHHHHHHHhhhhccCCCCeEEecCCccceeEEEEeeeEEEEEccC------------------
Confidence 45789999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCCccceeeeEcCCCCeec-hhhhccc-CcccceEeecCceEEEEecccccccccCccccccc
Q 002560 677 DGTQSSKELSVEKSEGSYFG-EWTLLGE-HMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 677 ~~~~~~~~~v~~l~~G~~FG-e~all~~-~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+....+..|++||+|| |..+... -|.++||.|.+-|+++.|.+++|..++..++.+-.
T Consensus 479 ----g~~~~~~~L~~Gd~~GeEl~~~~~~~p~t~TVralt~~el~~L~~~dL~~V~~~f~~~~~ 538 (727)
T KOG0498|consen 479 ----GGFFVVAILGPGDFFGEELLTWCLDLPQTRTVRALTYCELFRLSADDLKEVLQQFRRLGS 538 (727)
T ss_pred ----CceEEEEEecCCCccchHHHHHHhcCCCCceeehhhhhhHHhccHHHHHHHHHHhHHHHH
Confidence 3567899999999999 6666555 78899999999999999999999999888775443
|
|
| >PRK13918 CRP/FNR family transcriptional regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.6e-09 Score=111.12 Aligned_cols=84 Identities=24% Similarity=0.274 Sum_probs=75.2
Q ss_pred cceEEEecCCCEEEcCCC--cCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEcc
Q 002560 495 CMQRVEVQAGDIVVKQGG--EGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVT 572 (908)
Q Consensus 495 ~~~~~~~~~ge~I~~~Gd--~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~ 572 (908)
.++.+.|++|++|+++|| +++.+|+|++|.|+++..+.+|++.+..++ .||++||+.+++ +.++++++.|++
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~-----~~Gd~~G~~~~~-~~~~~~~~~A~~ 78 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYV-----RPGEYFGEEALA-GAERAYFAEAVT 78 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEe-----cCCCeechHHhc-CCCCCceEEEcC
Confidence 467789999999999999 779999999999999999999998766655 899999997654 578999999999
Q ss_pred ceEEEEEeHHHH
Q 002560 573 NGMLWALKREDF 584 (908)
Q Consensus 573 ~~~l~~i~~~~f 584 (908)
+|+++.|+++.|
T Consensus 79 ~~~v~~i~~~~~ 90 (202)
T PRK13918 79 DSRIDVLNPALM 90 (202)
T ss_pred ceEEEEEEHHHc
Confidence 999999998876
|
|
| >PLN02868 acyl-CoA thioesterase family protein | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.6e-09 Score=123.35 Aligned_cols=114 Identities=25% Similarity=0.379 Sum_probs=100.9
Q ss_pred HHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCcccc
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED 676 (908)
Q Consensus 597 ~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~ 676 (908)
...+++++++|+.++..++.+|+..+....|++|++|+++|+..+.+|+|++|.|++++...
T Consensus 6 ~~~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~------------------ 67 (413)
T PLN02868 6 VVEFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAE------------------ 67 (413)
T ss_pred HHHHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECC------------------
Confidence 34678899999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCccc
Q 002560 677 DGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLT 734 (908)
Q Consensus 677 ~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~ 734 (908)
++ +..+..+++|++||+. +.+.++.++++|.++++|+.|+++.|..+.....
T Consensus 68 ---~g-e~~l~~l~~Gd~fG~~--l~~~~~~~~~~A~~d~~v~~ip~~~~~~~~~~~~ 119 (413)
T PLN02868 68 ---EE-SRPEFLLKRYDYFGYG--LSGSVHSADVVAVSELTCLVLPHEHCHLLSPKSI 119 (413)
T ss_pred ---CC-cEEEEEeCCCCEeehh--hCCCCcccEEEECCCEEEEEEcHHHHhhhccccc
Confidence 23 5678899999999975 6789999999999999999999999976654433
|
|
| >PRK10402 DNA-binding transcriptional activator YeiL; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.1e-10 Score=114.95 Aligned_cols=101 Identities=14% Similarity=0.184 Sum_probs=91.5
Q ss_pred HHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeec
Q 002560 617 HLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFG 696 (908)
Q Consensus 617 ~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FG 696 (908)
.+......+.|++|++|+.+|++.+.+|+|.+|.|+++.... ++++..+..+.+|++||
T Consensus 26 ~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~---------------------~G~e~~~~~~~~g~~~G 84 (226)
T PRK10402 26 DVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLA---------------------NGKVSLIDFFAAPCFIG 84 (226)
T ss_pred HHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECC---------------------CCCEeeeeecCCCCeEE
Confidence 467778888999999999999999999999999999987654 46678899999999999
Q ss_pred hhhhcccCcccceEeecCceEEEEecccccccccCccccccc
Q 002560 697 EWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 697 e~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+.+++.+.++.+++.|.++++++.|+++.|.+++...+.+..
T Consensus 85 ~~~~~~~~~~~~~~~A~~~~~i~~i~~~~~~~ll~~~p~~~~ 126 (226)
T PRK10402 85 EIELIDKDHETKAVQAIEECWCLALPMKDCRPLLLNDALFLR 126 (226)
T ss_pred eehhhcCCCCCccEEEeccEEEEEEEHHHHHHHHhcCHHHHH
Confidence 999999999999999999999999999999999988776654
|
|
| >KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.4e-09 Score=115.86 Aligned_cols=257 Identities=17% Similarity=0.171 Sum_probs=172.4
Q ss_pred cccccCCHHHHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEec--c---
Q 002560 458 SSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQ--E--- 532 (908)
Q Consensus 458 ~~~~~k~~e~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~--~--- 532 (908)
++++-+++.++.-....|.....|++|-...++.++....++.++...++|+.|+.+.++||+++|.|-|.-.- +
T Consensus 22 k~~~~~t~~~~rN~~~~lh~ld~~snl~~~~lk~l~~~aryer~~g~~ilf~~~~var~wyillsgsv~v~gqi~mp~~~ 101 (1283)
T KOG3542|consen 22 KPPHLRTPDDIRNVYEQLHQLDTFSNLFIGPLKALCKTARYERHPGQYILFRDGDVARSWYILLSGSVFVEGQIYMPYGC 101 (1283)
T ss_pred CCcccCChhhhhhHHHHHhhhhhhhhhhhhhHHHhhhhhhhhcCCCceEEecccchhhheeeeeccceEeecceecCccc
Confidence 34556677777777778999999999999999999999999999999999999999999999999998763200 0
Q ss_pred ----ccCcccce--------EEEe-eecCC------------C-----C---cchhh----------hh-----------
Q 002560 533 ----EKNGEVPR--------VLQR-YTAEK------------L-----S---SFGEL----------AL----------- 558 (908)
Q Consensus 533 ----~g~~~~~~--------~~~~-~~~~~------------G-----~---~fGe~----------sl----------- 558 (908)
-|....-. .+.+ |--.+ + + .=||- ++
T Consensus 102 fgkr~g~~r~~nclllq~semivid~~~e~q~n~ms~~~p~rq~~~~~~~v~~k~erks~~~~~~~~a~~slPad~tklh 181 (1283)
T KOG3542|consen 102 FGKRTGQNRTHNCLLLQESEMIVIDYPTEPQSNGMSPRTPPRQIHHSGEPVHQKTERKSAPNMSVDIAMPSLPADPTKLH 181 (1283)
T ss_pred cccccccccccceeeecccceeeeecCCCccccccCCCCCcccccccCCccccccccccCCccchhccCCCCCCCccccc
Confidence 01000000 0000 00000 0 0 00000 00
Q ss_pred hcCCCce-----------eEEE-----------------EccceEE-------------------------EEEeHHHHH
Q 002560 559 MYNKPLQ-----------ASVR-----------------AVTNGML-------------------------WALKREDFR 585 (908)
Q Consensus 559 l~~~~r~-----------~tv~-----------------A~~~~~l-------------------------~~i~~~~f~ 585 (908)
+...|.+ +++. .+.+..+ -..+|+..+
T Consensus 182 Lt~~phPqvthvSSS~SgcSi~sdsGsSsLsdiyqatEsevGdidl~rLpEtavDSedDe~e~e~ierssdplm~RD~VR 261 (1283)
T KOG3542|consen 182 LTQTPHPQVTHVSSSSSGCSINSDSGSSSLSDIYQATESEVGDIDLARLPETAVDSEDDEGEMESIERSSDPLMDRDSVR 261 (1283)
T ss_pred CCCCCCCCCceeccCCCCCceeCCCCchHHHHHHHHhhccccccccccCCCCCCCcccccccchhhhhcCCCccchHHHH
Confidence 0000100 0000 0000001 112244555
Q ss_pred HHHhhhhh------hHHHHHHhhhchhhccCCHHHHHHHHHhcccccc-CCCCEEEEcCCCCCeEEEEEecEEEEEEccc
Q 002560 586 GILMSEFS------NLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSF-SAGQTIVNMNEGVAALYIIQRGQVRITFDAD 658 (908)
Q Consensus 586 ~ll~~~~~------~~~~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~-~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~ 658 (908)
+.|.+.|. ....+.|+.+.+.|..|+-..+..|+..+....+ .+|.+|+..|++.|.+|+|++|.|+|++...
T Consensus 262 eCLEKeP~drtddDieqLLeFMhqlpAFAnmtMSvrReLC~vMvFaVVe~AGtivL~dgeeLDSWsVIlNG~VEv~~PdG 341 (1283)
T KOG3542|consen 262 ECLEKEPSDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCLVMVFAVVEDAGTIVLADGEELDSWSVILNGCVEVVKPDG 341 (1283)
T ss_pred HHHhcCCcccchHHHHHHHHHHHhchHhhcccHHHHHHHHHHHHHHHHhhcCeEEecCCcccceeEEEecceEEEecCCC
Confidence 55655553 3356789999999999999999999998887655 7899999999999999999999999987554
Q ss_pred ccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCcccceEe-ecCceEEEEecccccccccCcccccc
Q 002560 659 LLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAV-AVDDVVCAILTKEKFDLVVGPLTKIS 737 (908)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~-a~~~~~~~~i~~~~f~~llg~~~~~~ 737 (908)
....|.-|+-||-..-+..+...-.+. -++||+..+|...+|-+++..+.+-+
T Consensus 342 --------------------------k~e~l~mGnSFG~~PT~dkqym~G~mRTkVDDCqFVciaqqDycrIln~vekn~ 395 (1283)
T KOG3542|consen 342 --------------------------KREELKMGNSFGAEPTPDKQYMIGEMRTKVDDCQFVCIAQQDYCRILNTVEKNI 395 (1283)
T ss_pred --------------------------ceEEeecccccCCCCCcchhhhhhhhheecccceEEEeehhhHHHHHHHHHhhh
Confidence 355678899999765555433333332 45899999999999999998887766
Q ss_pred ccc
Q 002560 738 HDD 740 (908)
Q Consensus 738 ~~~ 740 (908)
++.
T Consensus 396 ~Kv 398 (1283)
T KOG3542|consen 396 EKV 398 (1283)
T ss_pred hhh
Confidence 654
|
|
| >KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.4e-09 Score=114.45 Aligned_cols=124 Identities=21% Similarity=0.269 Sum_probs=107.2
Q ss_pred HHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeee
Q 002560 467 EEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYT 546 (908)
Q Consensus 467 ~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~ 546 (908)
..+...+.|+++++|+.-.+.-+.+|+-.++...|.||++|++.||.+..||||.+|.+.|...+ |... + .+
T Consensus 301 A~nvh~dTLkkV~iF~~ce~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~dD--g~t~----~--~~ 372 (536)
T KOG0500|consen 301 AINVHLDTLKKVRIFQDCEAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVADD--GVTV----F--VT 372 (536)
T ss_pred HHHHHHHHHHhhhHHHhcchhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEEEEEecC--CcEE----E--EE
Confidence 34556788999999999999999999999999999999999999999999999999999997543 3221 1 24
Q ss_pred cCCCCcchhhhhhc------CCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHHHH
Q 002560 547 AEKLSSFGELALMY------NKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSL 598 (908)
Q Consensus 547 ~~~G~~fGe~sll~------~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~~ 598 (908)
+.+|++|||++++. +..|+++|+.+.-+.+++++++++.+.|.+.|+.+..+
T Consensus 373 L~~G~~FGEisIlni~g~~~gNRRtanvrSvGYSDlfvLskdDl~~aL~eYP~a~~~L 430 (536)
T KOG0500|consen 373 LKAGSVFGEISILNIKGNKNGNRRTANVRSVGYSDLFVLSKDDLWEALSEYPDARKRL 430 (536)
T ss_pred ecCCceeeeeEEEEEcCcccCCcceeeeeeeccceeeEeeHHHHHHHHHhCCHHHHHH
Confidence 47899999999862 47899999999999999999999999999999765433
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.7e-10 Score=118.84 Aligned_cols=146 Identities=17% Similarity=0.170 Sum_probs=104.1
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEEECCCCc-----------------------------------eEEEe
Q 002560 756 KSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN-----------------------------------FLSLK 800 (908)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~-----------------------------------~~alK 800 (908)
.+.+..-...+++++|++...||+|....||.++.+..+. +.|+|
T Consensus 144 Dei~~r~dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiK 223 (598)
T KOG4158|consen 144 DEIPNRIDSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIK 223 (598)
T ss_pred CcCcchhhcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHH
Confidence 3344445567899999999999999999999986543110 23556
Q ss_pred eechhhhhc--cchHHHHHHHH-----------------HHHH----hcCCCCccceeeeeecc----------------
Q 002560 801 RFSKQKVKC--LGKEVQVLKEK-----------------NLMK----SVSPSACVPQILCTCAD---------------- 841 (908)
Q Consensus 801 ~~~~~~~~~--~~~~~~~~~E~-----------------~il~----~l~~~~~i~~~~~~~~~---------------- 841 (908)
++..-...+ ....+...+|. +.+. .|..||||++++..|.+
T Consensus 224 mMfN~~~~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdal 303 (598)
T KOG4158|consen 224 MMFNFEHDSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDAL 303 (598)
T ss_pred HhcccccCCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccc
Confidence 553222111 00111111110 0011 23459999999877743
Q ss_pred -----------CCeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 842 -----------SMHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 842 -----------~~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
...+|+||..+ ..+|..++. ...+....+.+++|+++|+.|||.+||.|||+|.+||||.
T Consensus 304 p~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~E 375 (598)
T KOG4158|consen 304 PARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLE 375 (598)
T ss_pred cceecccccCCCceEEEehhcc-hhhHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEE
Confidence 34689999988 469999998 8889999999999999999999999999999999999995
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.9e-10 Score=127.88 Aligned_cols=127 Identities=17% Similarity=0.263 Sum_probs=83.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc-------------------------------cchHHHH
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-------------------------------LGKEVQV 816 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~-------------------------------~~~~~~~ 816 (908)
+.+|+. +.||+|++|.||+|+.+.+|+.||||+.++..... .+..+.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 455666 78999999999999999889999999987532100 0112333
Q ss_pred HHHHHHHHhcCCCCccceeeeeecc-------------CCeEEEEEecCCCCcHHHH--Hc-C-----CCCHHHHHHHHH
Q 002560 817 LKEKNLMKSVSPSACVPQILCTCAD-------------SMHAGLLLNTYLACPLASI--LH-T-----PLDEQSARFCAA 875 (908)
Q Consensus 817 ~~E~~il~~l~~~~~i~~~~~~~~~-------------~~~~~iv~e~~~gg~L~~~--l~-~-----~l~~~~~~~~~~ 875 (908)
.+|..+.... .|+.++...|.+ ....+|+|||+.|+++.++ +. . .+.+..+..++.
T Consensus 198 ~~ElD~~~Ea---~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 198 HDELDLMREA---ANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFT 274 (537)
T ss_pred HHhhCHHHHH---HHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 4444443332 122222222222 3345799999999999874 32 2 244555555555
Q ss_pred HHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 876 SVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 876 qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
|++ ..|++|+|+||.||+++.+|
T Consensus 275 Qif-------~~GffHaDpHPGNIlv~~~g 297 (537)
T PRK04750 275 QVF-------RDGFFHADMHPGNIFVSYDP 297 (537)
T ss_pred HHH-------hCCeeeCCCChHHeEEecCC
Confidence 554 58999999999999999887
|
|
| >KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1e-08 Score=117.35 Aligned_cols=225 Identities=18% Similarity=0.198 Sum_probs=162.3
Q ss_pred HhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhh-hh---hcCCC---c
Q 002560 492 LLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGEL-AL---MYNKP---L 564 (908)
Q Consensus 492 l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~-sl---l~~~~---r 564 (908)
++++++...+..|++|++.|++.+.+|++.+|.+.|+..+.+|++...+.+ .+|+.|-.+ ++ +.+.| +
T Consensus 111 L~rh~~t~~l~~Gd~i~~~~~~dd~i~vv~sg~l~v~~~~~~g~~~llk~V-----~~G~~~tSllSiLd~l~~~ps~~~ 185 (1158)
T KOG2968|consen 111 LDRHIETLSLDAGDYIFKPGESDDSIYVVISGELTVHIRNGDGKEYLLKTV-----PPGGSFTSLLSILDSLPGFPSLSR 185 (1158)
T ss_pred echhhhhhcccCCceeccCCCCCceEEEEeccceEEEecCCCCceeeEeec-----cCCCchHhHHHHHHhccCCCcccc
Confidence 347788889999999999999999999999999999999999998776666 788776544 33 33334 5
Q ss_pred eeEEEEccceEEEEEeHHHHHHHHhhhhhhHHH-----H------------------HHhhhchhhccCCH---------
Q 002560 565 QASVRAVTNGMLWALKREDFRGILMSEFSNLSS-----L------------------KLLRSVDLLSRLTI--------- 612 (908)
Q Consensus 565 ~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~-----~------------------~~l~~~~~l~~l~~--------- 612 (908)
...++|.++|.+..++...|.....++|..... + +.+..+..++.++.
T Consensus 186 ~i~akA~t~~tv~~~p~~sF~~~~~k~P~s~iriiQvvmTRLq~vTf~t~~~YLGL~~el~~~e~~~~l~~~~g~~~~~~ 265 (1158)
T KOG2968|consen 186 TIAAKAATDCTVARIPYTSFRESFHKNPESSIRIIQVVMTRLQRVTLTTLHNYLGLSNELMSIERRKRLDSSEGSTYGNR 265 (1158)
T ss_pred eeeeeeecCceEEEeccchhhhhhccChHHHHHHHHHHHHHHHHhhHHHHHhhcCcchhhhhhhhhccccccccccccCc
Confidence 678899999999999999999999888853210 0 11110000000000
Q ss_pred --------------------------------------------------------------HHHHH---------HHHh
Q 002560 613 --------------------------------------------------------------LQLSH---------LADT 621 (908)
Q Consensus 613 --------------------------------------------------------------~~~~~---------l~~~ 621 (908)
.+... ....
T Consensus 266 ~~~g~s~~~lq~~~~~~~~~~s~~v~~~~~~~n~~dlls~~~~gt~~~~~sv~~l~~~~~~~~~~~~~~s~~~ls~~~t~ 345 (1158)
T KOG2968|consen 266 ATIGASSSSLQLLVEIPYSEHSRSVKEGSKLFNAGDLLSDSTRGTRKLFASVHGLLIDALLVRDNIQQGSFSMLSKTGTS 345 (1158)
T ss_pred cccCCCCcccccccccccccccccccccccccCCcccccccccCccccccccccccccccchhhhhhhcccccccccCcc
Confidence 00000 0000
Q ss_pred ccc----------------------------------------cccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccc
Q 002560 622 LSE----------------------------------------VSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLS 661 (908)
Q Consensus 622 l~~----------------------------------------~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~ 661 (908)
+.. ..-+...+|.++|+....+|+|..|...++......
T Consensus 346 i~~~~~~~~~~~~~~e~~~~~~~~v~~l~~~l~~~~~~si~ll~~~keitiiv~q~a~~~gl~~ii~g~l~v~~sm~~~- 424 (1158)
T KOG2968|consen 346 IHLEIFEGEHKLVEKEGRKISSDGVDALDLFLGLSNEDSIVLLELEKEITIIVEQGARDVGLYYIIKGSLSVYQSMYDV- 424 (1158)
T ss_pred chhhccCCcccccccccchhhhhhHHHHHHHhhhcccchhhhhccccceEEEEecccccceeeEEeecceeeeehhccc-
Confidence 000 111334567899999999999999999776554311
Q ss_pred cccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCccccc
Q 002560 662 NANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736 (908)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~ 736 (908)
+. ......+.+...++|++||.+++|++++.-++++|.+|+.++.|++.+|.+++-..+.+
T Consensus 425 --------s~------~~~~~~~~~f~v~pG~ivgyla~lt~e~S~~tirArsdt~v~~isrs~l~~~~~~~p~I 485 (1158)
T KOG2968|consen 425 --------SG------NLVLAGMLLFVVGPGEIVGYLAILTNEPSFITIRARSDTRVLFISRSDLERFLDAEPLI 485 (1158)
T ss_pred --------cc------ccccccceEEEecCCceechhhhhcCCcceEEEEEecceEEEEeeHHHHHHHHHhCceE
Confidence 00 12234567888999999999999999999999999999999999999999999887743
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.4e-10 Score=131.45 Aligned_cols=135 Identities=15% Similarity=0.097 Sum_probs=105.0
Q ss_pred EEEEEecCCCeEEEEEEEECCCCceEEEeeechh---hhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 772 EWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQ---KVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~---~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
.....+|.|++|.|+.+......+.++.|..... ..........+..|..+-..+. ||+++.....+.+....+-.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhcccchhh
Confidence 3467899999998888888776666666655421 1111111222666777777774 99987777766666555555
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||++ +|+.++. +.+....+..++.|++.|++|||+.||.|||+||+|+|+..+|.+|
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lk 460 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILK 460 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceE
Confidence 999999 9999998 3899999999999999999999999999999999999999998765
|
|
| >PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.2e-09 Score=111.73 Aligned_cols=115 Identities=17% Similarity=0.238 Sum_probs=97.5
Q ss_pred hhchhhccCCHHHHHHHHHhccc-cccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCC
Q 002560 602 RSVDLLSRLTILQLSHLADTLSE-VSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQ 680 (908)
Q Consensus 602 ~~~~~l~~l~~~~~~~l~~~l~~-~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (908)
++...+-.++.+++..|...... ..|++|++|+++||+.+++|+|.+|.|++++... +
T Consensus 16 ~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~---------------------~ 74 (235)
T PRK11161 16 SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE---------------------Q 74 (235)
T ss_pred cccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECC---------------------C
Confidence 34445557999999999998864 6799999999999999999999999999987654 4
Q ss_pred ccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCccccccc
Q 002560 681 SSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 681 ~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+++..+..+.+|++||+.+++.. ....+++|.++++++.|+++.|.+++...+.+..
T Consensus 75 G~e~i~~~~~~gd~~g~~~~~~~-~~~~~~~a~~~~~i~~ip~~~f~~l~~~~p~~~~ 131 (235)
T PRK11161 75 GDEQITGFHLAGDLVGFDAIGSG-QHPSFAQALETSMVCEIPFETLDDLSGKMPKLRQ 131 (235)
T ss_pred CCEEEEEeccCCceeccccccCC-CCcceEEEeccEEEEEEEHHHHHHHHHHChHHHH
Confidence 66778889999999999776544 4556899999999999999999999988877644
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.7e-09 Score=104.29 Aligned_cols=116 Identities=12% Similarity=0.033 Sum_probs=86.1
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
++.|+.|.++.||+++.. ++.|++|+...... .......|..+++.+.+...+++++..... ..++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEecC
Confidence 467899999999999874 77899998754321 112356788888888544556677665432 3579999999
Q ss_pred CCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCc-----EecCCCCCcEEEcC
Q 002560 854 ACPLASILHTPLDEQSARFCAASVVAALEDLHKRGV-----LYRGVSPDVLMLDK 903 (908)
Q Consensus 854 gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gI-----iHrDIKp~NILi~~ 903 (908)
|.++... ......++.+++.+|..||+.++ +|+|++|.|||++.
T Consensus 75 G~~l~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~ 123 (170)
T cd05151 75 GSELLTE------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD 123 (170)
T ss_pred CCccccc------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC
Confidence 9887643 11123457899999999999985 99999999999983
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.6e-09 Score=109.79 Aligned_cols=137 Identities=13% Similarity=0.090 Sum_probs=89.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCC---------CCccceeeee--
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSP---------SACVPQILCT-- 838 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~---------~~~i~~~~~~-- 838 (908)
.+...+.||.|+++.||.|++..|++.+|+|++...........+.+.+|.-....+.+ |-.++-.++.
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 56778999999999999999999999999999876553344455666666544433221 1111111111
Q ss_pred -------eccC---C-----eEEEEEecCCCCcHHHHHc-----CCC---CHHHH-HHHHHHHHHHHHHHHhCCcEecCC
Q 002560 839 -------CADS---M-----HAGLLLNTYLACPLASILH-----TPL---DEQSA-RFCAASVVAALEDLHKRGVLYRGV 894 (908)
Q Consensus 839 -------~~~~---~-----~~~iv~e~~~gg~L~~~l~-----~~l---~~~~~-~~~~~qi~~aL~~LH~~gIiHrDI 894 (908)
+... . +.+++|+-+ -++|.+++. ... ....+ ..+..|++..+.+||+.|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 1111 1 346778877 468888765 222 12223 344589999999999999999999
Q ss_pred CCCcEEEcCCCcc
Q 002560 895 SPDVLMLDKSGHL 907 (908)
Q Consensus 895 Kp~NILi~~~g~v 907 (908)
||+|++++.+|.+
T Consensus 172 ~~~nfll~~~G~v 184 (288)
T PF14531_consen 172 KPENFLLDQDGGV 184 (288)
T ss_dssp SGGGEEE-TTS-E
T ss_pred ceeeEEEcCCCCE
Confidence 9999999999975
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.2e-09 Score=119.44 Aligned_cols=127 Identities=17% Similarity=0.213 Sum_probs=84.8
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhcc-------------------------------ch------HHHHH
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCL-------------------------------GK------EVQVL 817 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~-------------------------------~~------~~~~~ 817 (908)
+.||.|++|.||+++.+ +|+.||||+.+......- .. +-.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 56999999999999875 789999999754310000 00 00134
Q ss_pred HHHHHHHhc----CCCCcc--ceeeeeeccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHH-HHHHHHhC
Q 002560 818 KEKNLMKSV----SPSACV--PQILCTCADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVA-ALEDLHKR 887 (908)
Q Consensus 818 ~E~~il~~l----~~~~~i--~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~-aL~~LH~~ 887 (908)
+|...+..+ .+++++ +++|..+ ....+++|||++|.+|.++.. ...+ ...++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR--TSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh--cCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC
Confidence 455444444 234433 3444322 345689999999999988765 1222 2345555555 46789999
Q ss_pred CcEecCCCCCcEEEcCCCcc
Q 002560 888 GVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 888 gIiHrDIKp~NILi~~~g~v 907 (908)
|++|+|+||.|||++.+|.+
T Consensus 277 g~~H~D~hPgNilv~~~g~i 296 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKI 296 (437)
T ss_pred CceeCCCCcccEEECCCCcE
Confidence 99999999999999988865
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.7e-09 Score=116.70 Aligned_cols=114 Identities=23% Similarity=0.298 Sum_probs=104.4
Q ss_pred HHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCC
Q 002560 599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDG 678 (908)
Q Consensus 599 ~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (908)
..|.++.+|+..+...+.-+...|..+.|-+|+.|.+.|+.+...|||+-|+|.|.-..+
T Consensus 527 ~~lSKVqLFq~Cdr~mirDmllrLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVlGGp~-------------------- 586 (815)
T KOG0499|consen 527 SILSKVQLFQGCDRQMIRDMLLRLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVLGGPD-------------------- 586 (815)
T ss_pred hhhhHHHHhhhhHHHHHHHHHHHhhceeecCCceeeecccccceeEEeecceEEEecCCC--------------------
Confidence 678899999999999999999999999999999999999999999999999999965433
Q ss_pred CCccceeeeEcCCCCeechhhhcc---cCcccceEeecCceEEEEecccccccccCcccc
Q 002560 679 TQSSKELSVEKSEGSYFGEWTLLG---EHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTK 735 (908)
Q Consensus 679 ~~~~~~~v~~l~~G~~FGe~all~---~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~ 735 (908)
..+.+++|.+|.+|||++||. ++.|+|+|+|.+=+.+++++|+++++++-.+++
T Consensus 587 ---~~~Vl~tL~~GsVFGEISLLaigG~nRRTAnV~a~Gf~nLfvL~KkdLneil~~YP~ 643 (815)
T KOG0499|consen 587 ---GTKVLVTLKAGSVFGEISLLAIGGGNRRTANVVAHGFANLFVLDKKDLNEILVHYPD 643 (815)
T ss_pred ---CCEEEEEecccceeeeeeeeeecCCCccchhhhhcccceeeEecHhHHHHHHHhCcc
Confidence 356899999999999999984 488999999999999999999999999988776
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.3e-09 Score=135.23 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=62.7
Q ss_pred Cccceeeeee-------ccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcE
Q 002560 830 ACVPQILCTC-------ADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899 (908)
Q Consensus 830 ~~i~~~~~~~-------~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NI 899 (908)
+||.+++++| .....++++||++ +++|.++|. ..+++..++.|+.||+.||.|||++||+||||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 4555555555 2234577788887 679999996 4599999999999999999999999999999999999
Q ss_pred EEcCCCcc
Q 002560 900 MLDKSGHL 907 (908)
Q Consensus 900 Li~~~g~v 907 (908)
||+..|.+
T Consensus 112 Ll~~~~~~ 119 (793)
T PLN00181 112 VMSSFNHV 119 (793)
T ss_pred EEcccCcE
Confidence 99765543
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.6e-09 Score=110.44 Aligned_cols=138 Identities=16% Similarity=0.165 Sum_probs=108.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCC-----ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee-cc
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSE-----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC-AD 841 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~-----~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~-~~ 841 (908)
-..++....+.+|.||.||.+.+.+.. +.+-+|.++... ..-+...++.|...+..+. |||+..+.+.. .+
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~s-H~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIED 359 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCc-CCCccceeEEEeec
Confidence 344777788999999999999765432 233445443322 2335667889999999985 99999988765 45
Q ss_pred CCeEEEEEecCCCCcHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....++++.+..-|+|..+|. +.++..+...++.|+..|+.|||++|+||.||-..|++||+.-++|
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVk 436 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVK 436 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEE
Confidence 567788889998899999986 3467778888999999999999999999999999999999876554
|
|
| >COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-08 Score=112.84 Aligned_cols=114 Identities=24% Similarity=0.350 Sum_probs=105.5
Q ss_pred HHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCC
Q 002560 599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDG 678 (908)
Q Consensus 599 ~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (908)
.|+.+.|.|..|+++++..|..++.-..|.+|++|+..|.+..++|+|.+|.|.+.....
T Consensus 7 ~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~~~g-------------------- 66 (610)
T COG2905 7 QFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRSDGG-------------------- 66 (610)
T ss_pred HHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEcCCC--------------------
Confidence 689999999999999999999999999999999999999999999999999999876543
Q ss_pred CCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCcccccc
Q 002560 679 TQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS 737 (908)
Q Consensus 679 ~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~ 737 (908)
..+..+..|+.||-.+|++..+-...++|.+|+.||.|+++.|.++.+..+.+.
T Consensus 67 -----~v~~~~~~gdlFg~~~l~~~~~~~~~~~aeedsl~y~lp~s~F~ql~~~n~~f~ 120 (610)
T COG2905 67 -----EVLDRLAAGDLFGFSSLFTELNKQRYMAAEEDSLCYLLPKSVFMQLMEENPEFA 120 (610)
T ss_pred -----eeeeeeccCccccchhhcccCCCcceeEeeccceEEecCHHHHHHHHHhCcHHH
Confidence 278999999999999999999999999999999999999999999988776643
|
|
| >PRK13918 CRP/FNR family transcriptional regulator; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-08 Score=103.53 Aligned_cols=84 Identities=24% Similarity=0.287 Sum_probs=74.8
Q ss_pred hccccccCCCCEEEEcCC--CCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeechh
Q 002560 621 TLSEVSFSAGQTIVNMNE--GVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEW 698 (908)
Q Consensus 621 ~l~~~~~~~G~~Ii~qG~--~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~ 698 (908)
.++...|++|++|+++|+ +.+.+|+|++|.|++++... ++++..+..+.+|++||+.
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~---------------------~G~e~~l~~~~~Gd~~G~~ 63 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDD---------------------EGNALTLRYVRPGEYFGEE 63 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECC---------------------CCCEEEEEEecCCCeechH
Confidence 356678999999999999 77999999999999988654 5778899999999999997
Q ss_pred hhcccCcccceEeecCceEEEEeccccc
Q 002560 699 TLLGEHMGSLTAVAVDDVVCAILTKEKF 726 (908)
Q Consensus 699 all~~~~r~~tv~a~~~~~~~~i~~~~f 726 (908)
++. ..++++++.|.++++++.|++..|
T Consensus 64 ~~~-~~~~~~~~~A~~~~~v~~i~~~~~ 90 (202)
T PRK13918 64 ALA-GAERAYFAEAVTDSRIDVLNPALM 90 (202)
T ss_pred Hhc-CCCCCceEEEcCceEEEEEEHHHc
Confidence 665 578899999999999999999987
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.7e-08 Score=98.02 Aligned_cols=125 Identities=12% Similarity=0.108 Sum_probs=89.5
Q ss_pred EEecCCCeEEEEEEEECC------CCceEEEeeechhhh--------h-----------ccchHHHH----HHHHHHHHh
Q 002560 775 KCLYSTDCSEIGLVLLRD------SENFLSLKRFSKQKV--------K-----------CLGKEVQV----LKEKNLMKS 825 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~------~~~~~alK~~~~~~~--------~-----------~~~~~~~~----~~E~~il~~ 825 (908)
..||.|.=+.||.+.... .+..+|+|+.+.... . +......+ .+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999997643 357999999753211 0 01112223 379999998
Q ss_pred cCC-CCccceeeeeeccCCeEEEEEecCCCCcHH-HHHc-CCCCHHHHHHHHHHHHHHHHHH-HhCCcEecCCCCCcEEE
Q 002560 826 VSP-SACVPQILCTCADSMHAGLLLNTYLACPLA-SILH-TPLDEQSARFCAASVVAALEDL-HKRGVLYRGVSPDVLML 901 (908)
Q Consensus 826 l~~-~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~-~~l~-~~l~~~~~~~~~~qi~~aL~~L-H~~gIiHrDIKp~NILi 901 (908)
+.. .-.+|..+.. ...+|||||+.+..+. ..+. ..+++.....+..+++.+|..| |..||+|+||+|.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 842 3567777764 4568999999664332 2233 3456667778889999999998 89999999999999999
Q ss_pred cC
Q 002560 902 DK 903 (908)
Q Consensus 902 ~~ 903 (908)
++
T Consensus 159 ~~ 160 (197)
T cd05146 159 HD 160 (197)
T ss_pred EC
Confidence 74
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.3e-08 Score=109.59 Aligned_cols=115 Identities=26% Similarity=0.355 Sum_probs=99.8
Q ss_pred HHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCc
Q 002560 473 RALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS 552 (908)
Q Consensus 473 ~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~ 552 (908)
..|+++.+|++.+...+..++-.+..+.|-+|+.|++.|+.+..||||..|.|.|.-. ++|. .++ .++..|.+
T Consensus 527 ~~lSKVqLFq~Cdr~mirDmllrLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVlGG-p~~~----~Vl--~tL~~GsV 599 (815)
T KOG0499|consen 527 SILSKVQLFQGCDRQMIRDMLLRLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVLGG-PDGT----KVL--VTLKAGSV 599 (815)
T ss_pred hhhhHHHHhhhhHHHHHHHHHHHhhceeecCCceeeecccccceeEEeecceEEEecC-CCCC----EEE--EEecccce
Confidence 4688999999999999999999999999999999999999999999999999999733 2332 222 24477999
Q ss_pred chhhhhh---cCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhh
Q 002560 553 FGELALM---YNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN 594 (908)
Q Consensus 553 fGe~sll---~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~ 594 (908)
|||++|+ .+..|+|+|+|..-|.|++++++++++++.-.|..
T Consensus 600 FGEISLLaigG~nRRTAnV~a~Gf~nLfvL~KkdLneil~~YP~s 644 (815)
T KOG0499|consen 600 FGEISLLAIGGGNRRTANVVAHGFANLFVLDKKDLNEILVHYPDS 644 (815)
T ss_pred eeeeeeeeecCCCccchhhhhcccceeeEecHhHHHHHHHhCccH
Confidence 9999997 34789999999999999999999999999887753
|
|
| >TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.4e-08 Score=103.34 Aligned_cols=88 Identities=22% Similarity=0.266 Sum_probs=78.1
Q ss_pred CCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCc--cc
Q 002560 630 GQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHM--GS 707 (908)
Q Consensus 630 G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~--r~ 707 (908)
|+.|+++|++.+.+|+|++|.|+++.... ++++..+..+++|++||+.+++.+.+ +.
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~---------------------~G~e~~l~~~~~g~~~G~~~~~~~~~~~~~ 59 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYE---------------------SGEEITVALLRENSVFGVLSLITGHRSDRF 59 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCC---------------------CCcEeeeEEccCCCEeeeeeeccCCCCccc
Confidence 78999999999999999999999987654 46678899999999999999998764 45
Q ss_pred ceEeecCceEEEEecccccccccCccccccc
Q 002560 708 LTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 708 ~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
++++|.++++++.|++++|.+++...+.+..
T Consensus 60 ~~~~A~~~~~v~~i~~~~~~~l~~~~p~l~~ 90 (193)
T TIGR03697 60 YHAVAFTRVELLAVPIEQVEKAIEEDPDLSM 90 (193)
T ss_pred eEEEEecceEEEEeeHHHHHHHHHHChHHHH
Confidence 7899999999999999999999988777654
|
Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C. |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.4e-09 Score=121.47 Aligned_cols=130 Identities=19% Similarity=0.154 Sum_probs=103.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhh-hhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQK-VKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~-~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+|...+.||++.|=+|.++++.+ | .+++|++-+.. ........+.+.|+. .... .+||++.+-.+.......|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHHHHhhHHHHHH
Confidence 78999999999999999998753 3 49999987654 223333344444555 3333 599999988887888888999
Q ss_pred EecCCCCcHHHHHc-CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 849 LNTYLACPLASILH-TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
-+|.. .+|++.|. ++ +..-+.+.|+.|++.||.-+|..||+|+|||.|||||+.=
T Consensus 100 Rqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSW 156 (1431)
T KOG1240|consen 100 RQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSW 156 (1431)
T ss_pred HHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeee
Confidence 99984 59999998 44 6777888899999999999999999999999999999863
|
|
| >PRK09391 fixK transcriptional regulator FixK; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.2e-08 Score=102.59 Aligned_cols=98 Identities=17% Similarity=0.243 Sum_probs=83.8
Q ss_pred HHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeech
Q 002560 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGE 697 (908)
Q Consensus 618 l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe 697 (908)
+......+.|++|++|+.+|+.++++|+|++|.|+++.... ++++..+..+.+|++||+
T Consensus 34 ~~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~---------------------~G~e~i~~~~~~Gd~fG~ 92 (230)
T PRK09391 34 AGLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLS---------------------DGRRQIGAFHLPGDVFGL 92 (230)
T ss_pred ccceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECC---------------------CCcEEEEEEecCCceecc
Confidence 34455678999999999999999999999999999987654 456778888999999996
Q ss_pred hhhcccCcccceEeecCceEEEEecccccccccCcccccccc
Q 002560 698 WTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHD 739 (908)
Q Consensus 698 ~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~~ 739 (908)
. ...++.+++.|+++++++.|+++.|.+++...+.+...
T Consensus 93 ~---~~~~~~~~~~A~~ds~v~~i~~~~f~~l~~~~p~l~~~ 131 (230)
T PRK09391 93 E---SGSTHRFTAEAIVDTTVRLIKRRSLEQAAATDVDVARA 131 (230)
T ss_pred c---CCCcCCeEEEEcCceEEEEEEHHHHHHHHhhChHHHHH
Confidence 4 45678899999999999999999999999887776553
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=8e-07 Score=85.42 Aligned_cols=131 Identities=8% Similarity=0.085 Sum_probs=93.1
Q ss_pred EEEEecCCCeEEEEEEEECCCCceEEEeee-----chhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 773 WRKCLYSTDCSEIGLVLLRDSENFLSLKRF-----SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 773 ~~~~LG~G~~g~V~~~~~~~~~~~~alK~~-----~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.+..+-+|+=+.|+++.+ .|+.+.+|.= +...+...-...+..+|.++|.++. --.|+-..-+|.|...-+|
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 467788999999999877 5677777642 2222222233466788999998873 3334333335566677789
Q ss_pred EEecCCC-CcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 848 LLNTYLA-CPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 848 v~e~~~g-g~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
+|||++| .++.+++. ..........++..|-..+.-||.++|||+||..+|||+..+|.
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~ 151 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGN 151 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCC
Confidence 9999987 46777775 22333333678888999999999999999999999999987763
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.2e-07 Score=93.72 Aligned_cols=109 Identities=18% Similarity=0.209 Sum_probs=80.1
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC-CccceeeeeeccC---CeEEEEEe
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS-ACVPQILCTCADS---MHAGLLLN 850 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~-~~i~~~~~~~~~~---~~~~iv~e 850 (908)
+.|+.|.++.||++.... |+.+++|+....... .....+..|..+++.+..+ ..+++++.+.... +..|+|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999998753 678999987654321 1234678899999998542 3467777766554 36789999
Q ss_pred cCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 002560 851 TYLACPLASILH-TPLDEQSARFCAASVVAALEDLHK 886 (908)
Q Consensus 851 ~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~ 886 (908)
|++|.++...+. ..+++.....++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 117 (223)
T cd05154 81 RVDGRVLRDRLLRPELSPEERRALARALADTLAALHS 117 (223)
T ss_pred EeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 999998877654 456777777777788888877773
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.3e-08 Score=112.85 Aligned_cols=105 Identities=25% Similarity=0.351 Sum_probs=80.2
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
.....-.+|+.++.+..|+||.||+++++.+.+.||+|+ ++..+.- + .|+... .+|+++
T Consensus 77 ~~~p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~lil--------R--nilt~a-~npfvv--------- 135 (1205)
T KOG0606|consen 77 RRAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLIL--------R--NILTFA-GNPFVV--------- 135 (1205)
T ss_pred ccCCCccccceeEeeccCCCCceeeeeccccccchhhcc-cccchhh--------h--cccccc-CCccee---------
Confidence 444567899999999999999999999999999999964 4433211 1 133333 466665
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+-...++ ++++... +.+++|||+.||+|||+||+|++|..-|++|
T Consensus 136 ------------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiK 183 (1205)
T KOG0606|consen 136 ------------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIK 183 (1205)
T ss_pred ------------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeeccccc
Confidence 55555555 4555443 7899999999999999999999999999986
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.9e-06 Score=83.50 Aligned_cols=123 Identities=14% Similarity=0.078 Sum_probs=84.9
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeee-ch----hhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRF-SK----QKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~-~~----~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
..+++|+=+.++.+.+. +..+++|.= +| ..+...-...+..+|.+++..+. ...|+-.+-+..+.+...|+|
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 35778888899888663 334555542 22 22222223456788999999874 334444444455667778999
Q ss_pred ecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 850 NTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 850 e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||++|..|.+.+... . -.++..+-.-+.-||.+||+|+||.++||++..++
T Consensus 79 e~I~G~~lkd~l~~~-~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~ 129 (204)
T COG3642 79 EYIEGELLKDALEEA-R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR 129 (204)
T ss_pred EEeCChhHHHHHHhc-c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc
Confidence 999999999888733 2 34555666667779999999999999999998764
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.32 E-value=8e-08 Score=113.29 Aligned_cols=140 Identities=20% Similarity=0.182 Sum_probs=117.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC-CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS-ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~-~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
....|.+.+.||+|+|+.|-++..... ...+|+|.+.... .......++..|..+-..++.|+|++++++......+.
T Consensus 18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~ 96 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSY 96 (601)
T ss_pred ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccc
Confidence 466788889999999999998877544 4467777765543 23334556667888878876799999999999999999
Q ss_pred EEEEecCCCCcHHHHH-c--C-CCCHHHHHHHHHHHHHHHHHHH-hCCcEecCCCCCcEEEcCCC-cc
Q 002560 846 GLLLNTYLACPLASIL-H--T-PLDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSG-HL 907 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l-~--~-~l~~~~~~~~~~qi~~aL~~LH-~~gIiHrDIKp~NILi~~~g-~v 907 (908)
++.++|..|++++..+ . . ..+...+..++.|+..++.|+| ..++.||||||+|.+++..| .+
T Consensus 97 ~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l 164 (601)
T KOG0590|consen 97 LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSAL 164 (601)
T ss_pred ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcc
Confidence 9999999999999999 5 2 6788899999999999999999 99999999999999999988 54
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.6e-07 Score=102.10 Aligned_cols=141 Identities=15% Similarity=0.103 Sum_probs=114.7
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEEC-CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLR-DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~-~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
......+|..+..||.|.|+.|+.+... .++..|++|.+.+....... ...-+.|+-+...+..|.+++..+..|...
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~-di~sl~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFAS-DIFSLGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHh-hhcchhhhhHhhHhhcccccCCCCCCcccc
Confidence 4556788999999999999999988754 56779999987654433322 223445666666666688898999888888
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
...|+-.|||.++++...+. ..+++...+....|++.++.++|++.++|+|+||+||++..+|
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~ 403 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG 403 (524)
T ss_pred ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch
Confidence 88999999999998776655 6788889999999999999999999999999999999998864
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.5e-07 Score=91.19 Aligned_cols=146 Identities=14% Similarity=0.118 Sum_probs=118.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee
Q 002560 758 IDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
...+.+..+++.++.++.+|.+...|..|++++. |.-++.|++...... ....+.|..|.-.|+.++ ||||+.+++
T Consensus 179 atlsr~~gid~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t-~risrdfneefp~lrifs-hpnilpvlg 254 (448)
T KOG0195|consen 179 ATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVT-ARISRDFNEEFPALRIFS-HPNILPVLG 254 (448)
T ss_pred cccccccCcchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeec-CCchhhhhh
Confidence 4456677889999999999999999999999885 455667877654432 223445667777777775 999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC--cEecCCCCCcEEEcCCCcc
Q 002560 838 TCADSMHAGLLLNTYLACPLASILHT----PLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~~----~l~~~~~~~~~~qi~~aL~~LH~~g--IiHrDIKp~NILi~~~g~v 907 (908)
.+....++.++..|++.|+|+.+|++ -.+..++..++..++.|+.|||+.. |.---|....+|||++-..
T Consensus 255 acnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedlta 330 (448)
T KOG0195|consen 255 ACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTA 330 (448)
T ss_pred hccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhh
Confidence 99999999999999999999999982 2678899999999999999999975 4444688889999987543
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.17 E-value=9.8e-06 Score=81.08 Aligned_cols=117 Identities=13% Similarity=0.133 Sum_probs=75.8
Q ss_pred EEEEEEECCCCceEEEeeechhhh-----------------------hccchHHHHHHHHHHHHhcCCC-Cccceeeeee
Q 002560 784 EIGLVLLRDSENFLSLKRFSKQKV-----------------------KCLGKEVQVLKEKNLMKSVSPS-ACVPQILCTC 839 (908)
Q Consensus 784 ~V~~~~~~~~~~~~alK~~~~~~~-----------------------~~~~~~~~~~~E~~il~~l~~~-~~i~~~~~~~ 839 (908)
.||.|... .+..+|+|+.+.... ...-......+|.+.|..+... -++|+++.+.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 37888764 567899998753210 0011234578899999999533 3678877553
Q ss_pred ccCCeEEEEEecCC--CCcHHHHHcCCCCHHHHHHHHHHHHHHHHH-HHhCCcEecCCCCCcEEEcCCC
Q 002560 840 ADSMHAGLLLNTYL--ACPLASILHTPLDEQSARFCAASVVAALED-LHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 840 ~~~~~~~iv~e~~~--gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~-LH~~gIiHrDIKp~NILi~~~g 905 (908)
..+|||||+. |..+..+....++......++.+++..+.. +|+.||+|+||.+.|||+++++
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~~ 144 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDGK 144 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETTC
T ss_pred ----CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecce
Confidence 2369999998 666665544444455667788888886655 5799999999999999998763
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.3e-05 Score=83.29 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhcCC-CCccceeeeeecc-----CCeEEEEEecCCCC-cHHHHHc----CCCCHHHHHHHHHHHHHHHHH
Q 002560 815 QVLKEKNLMKSVSP-SACVPQILCTCAD-----SMHAGLLLNTYLAC-PLASILH----TPLDEQSARFCAASVVAALED 883 (908)
Q Consensus 815 ~~~~E~~il~~l~~-~~~i~~~~~~~~~-----~~~~~iv~e~~~gg-~L~~~l~----~~l~~~~~~~~~~qi~~aL~~ 883 (908)
...+|...+..|.. .-.++....+... ....|+|||++++. +|.+++. ...+......++.+++..+.-
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~ 153 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD 153 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 36678887777621 1222333333322 23578999999886 7988875 345667788999999999999
Q ss_pred HHhCCcEecCCCCCcEEEcC
Q 002560 884 LHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 884 LH~~gIiHrDIKp~NILi~~ 903 (908)
||.+||+|+|++|.|||++.
T Consensus 154 LH~~Gi~HgDL~~~NiLl~~ 173 (268)
T PRK15123 154 MHAAGINHRDCYICHFLLHL 173 (268)
T ss_pred HHHCcCccCCCChhhEEEec
Confidence 99999999999999999985
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.8e-05 Score=77.45 Aligned_cols=93 Identities=14% Similarity=0.240 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHhcCC-CCccceeeeeeccC----CeEEEEEecCCCC-cHHHHHc--CCCCHHHHHHHHHHHHHHHHHH
Q 002560 813 EVQVLKEKNLMKSVSP-SACVPQILCTCADS----MHAGLLLNTYLAC-PLASILH--TPLDEQSARFCAASVVAALEDL 884 (908)
Q Consensus 813 ~~~~~~E~~il~~l~~-~~~i~~~~~~~~~~----~~~~iv~e~~~gg-~L~~~l~--~~l~~~~~~~~~~qi~~aL~~L 884 (908)
.....+|...+..|.. .-.+++.+.+.... ...|+|||++++. +|.+++. ...+......++.++...+.-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 3456777777666621 22344555444332 3458999999884 7999887 3467778889999999999999
Q ss_pred HhCCcEecCCCCCcEEEcCCC
Q 002560 885 HKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 885 H~~gIiHrDIKp~NILi~~~g 905 (908)
|.+||+|+|++|.|||++.++
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~ 155 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDD 155 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCC
Confidence 999999999999999999875
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 908 | ||||
| 2qvs_B | 310 | Crystal Structure Of Type Iia Holoenzyme Of Camp-De | 1e-29 | ||
| 1cx4_A | 305 | Crystal Structure Of A Deletion Mutant Of The Type | 2e-26 | ||
| 3of1_A | 246 | Crystal Structure Of Bcy1, The Yeast Regulatory Sub | 1e-25 | ||
| 3tnp_B | 416 | Structure And Allostery Of The Pka Riib Tetrameric | 1e-25 | ||
| 3tnq_A | 416 | Structure And Allostery Of The Pka Riib Tetrameric | 2e-25 | ||
| 2qcs_B | 291 | A Complex Structure Between The Catalytic And Regul | 7e-25 | ||
| 1rl3_A | 288 | Crystal Structure Of Camp-free R1a Subunit Of Pka L | 9e-25 | ||
| 1ne4_A | 283 | Crystal Structure Of Rp-Camp Binding R1a Subunit Of | 9e-25 | ||
| 4din_B | 381 | Novel Localization And Quaternary Structure Of The | 5e-23 | ||
| 3shr_A | 299 | Crystal Structure Of Cgmp-Dependent Protein Kinase | 3e-20 | ||
| 4da1_A | 389 | Crystal Structure Of Branched-Chain Alpha-Ketoacid | 1e-18 | ||
| 2iq1_A | 274 | Crystal Structure Of Human Ppm1k Length = 274 | 3e-18 | ||
| 3nmv_B | 324 | Crystal Structure Of Pyrabactin-Bound Abscisic Acid | 3e-18 | ||
| 3kdj_B | 316 | Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le | 2e-17 | ||
| 3jrq_A | 326 | Crystal Structure Of (+)-aba-bound Pyl1 In Complex | 2e-17 | ||
| 3nmn_B | 319 | Crystal Structure Of Pyrabactin-Bound Abscisic Acid | 3e-17 | ||
| 3idb_B | 161 | Crystal Structure Of (108-268)riib:c Holoenzyme Of | 2e-16 | ||
| 3idc_B | 164 | Crystal Structure Of (102-265)riib:c Holoenzyme Of | 2e-16 | ||
| 3fhi_B | 154 | Crystal Structure Of A Complex Between The Catalyti | 1e-15 | ||
| 3pvb_B | 160 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 1e-15 | ||
| 3nmt_B | 341 | Crystal Structure Of Pyrabactin Bound Abscisic Acid | 1e-14 | ||
| 3kb3_B | 321 | Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co | 1e-14 | ||
| 4ds8_B | 343 | Complex Structure Of Abscisic Acid Receptor Pyl3-(+ | 1e-14 | ||
| 3qn1_B | 337 | Crystal Structure Of The Pyr1 Abscisic Acid Recepto | 2e-14 | ||
| 3ujg_B | 350 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 2e-14 | ||
| 3rt0_A | 340 | Crystal Structure Of Pyl10-Hab1 Complex In The Abse | 6e-14 | ||
| 2i0o_A | 304 | Crystal Structure Of Anopheles Gambiae SerTHR PHOSP | 2e-13 | ||
| 2pnq_A | 467 | Crystal Structure Of Pyruvate Dehydrogenase Phospha | 5e-10 | ||
| 3mq3_A | 467 | Crystal Structure Of Native Bovine Pdp1c Length = 4 | 6e-10 | ||
| 3ocp_A | 139 | Crystal Structure Of Camp Bound Cgmp-Dependent Prot | 1e-09 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 3e-09 | ||
| 2p8e_A | 307 | Crystal Structure Of The SerineTHREONINE PHOSPHATAS | 1e-08 | ||
| 3fxj_A | 390 | Crystal Structure Of Human Protein Phosphatase 1a ( | 1e-08 | ||
| 1a6q_A | 382 | Crystal Structure Of The Protein SerineTHREONINE PH | 1e-08 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 1e-08 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 4e-08 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 4e-08 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 4e-08 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 2e-07 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 2e-07 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 3e-07 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 3e-07 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 3e-07 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 3e-07 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 3e-07 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 3e-07 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 3e-07 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 3e-07 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 3e-07 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 3e-07 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 3e-07 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 3e-07 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 4e-07 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 4e-07 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 4e-07 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 4e-07 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 4e-07 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 4e-07 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 4e-07 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 4e-07 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 5e-07 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 6e-07 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 7e-07 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 7e-07 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 7e-07 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 7e-07 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 8e-07 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 8e-07 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 8e-07 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 1e-06 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 1e-06 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-06 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 2e-06 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 2e-06 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 2e-06 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 2e-06 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 2e-06 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-06 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 2e-06 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-06 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 2e-06 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 2e-06 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 2e-06 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 2e-06 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 2e-06 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 2e-06 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 3e-06 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 3e-06 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 4e-06 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 4e-06 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 5e-06 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 6e-06 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 7e-06 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 7e-06 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 7e-06 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 7e-06 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 7e-06 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 7e-06 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 7e-06 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 9e-06 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 1e-05 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 1e-05 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 1e-05 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 2e-05 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 2e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 7e-05 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 1e-04 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 1e-04 | ||
| 2pop_A | 353 | The Crystal Structure Of Tab1 And Bir1 Complex Leng | 1e-04 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 2e-04 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 2e-04 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 2e-04 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 2e-04 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 2e-04 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 3e-04 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 3e-04 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 3e-04 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-04 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 3e-04 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 3e-04 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 3e-04 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-04 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 3e-04 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 3e-04 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 3e-04 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-04 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 3e-04 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 3e-04 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 3e-04 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 3e-04 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-04 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 3e-04 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-04 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 4e-04 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 4e-04 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 5e-04 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 8e-04 |
| >pdb|2QVS|B Chain B, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent Protein Kinase Length = 310 | Back alignment and structure |
|
| >pdb|1CX4|A Chain A, Crystal Structure Of A Deletion Mutant Of The Type Ii Beta Regulatory Subunit Of Camp-Dependent Protein Kinase Length = 305 | Back alignment and structure |
|
| >pdb|3OF1|A Chain A, Crystal Structure Of Bcy1, The Yeast Regulatory Subunit Of Pka Length = 246 | Back alignment and structure |
|
| >pdb|3TNP|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric Holoenzyme Length = 416 | Back alignment and structure |
|
| >pdb|3TNQ|A Chain A, Structure And Allostery Of The Pka Riib Tetrameric Holoenzyme Length = 416 | Back alignment and structure |
|
| >pdb|2QCS|B Chain B, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 291 | Back alignment and structure |
|
| >pdb|1RL3|A Chain A, Crystal Structure Of Camp-free R1a Subunit Of Pka Length = 288 | Back alignment and structure |
|
| >pdb|1NE4|A Chain A, Crystal Structure Of Rp-Camp Binding R1a Subunit Of Camp- Dependent Protein Kinase Length = 283 | Back alignment and structure |
|
| >pdb|4DIN|B Chain B, Novel Localization And Quaternary Structure Of The Pka Ri Beta Holoenzyme Length = 381 | Back alignment and structure |
|
| >pdb|3SHR|A Chain A, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals Novel Site Of Interchain Communication Length = 299 | Back alignment and structure |
|
| >pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 | Back alignment and structure |
|
| >pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 | Back alignment and structure |
|
| >pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 | Back alignment and structure |
|
| >pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 | Back alignment and structure |
|
| >pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 | Back alignment and structure |
|
| >pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 | Back alignment and structure |
|
| >pdb|3IDB|B Chain B, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp- Dependent Protein Kinase Length = 161 | Back alignment and structure |
|
| >pdb|3IDC|B Chain B, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp- Dependent Protein Kinase Length = 164 | Back alignment and structure |
|
| >pdb|3FHI|B Chain B, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 154 | Back alignment and structure |
|
| >pdb|3PVB|B Chain B, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 160 | Back alignment and structure |
|
| >pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 | Back alignment and structure |
|
| >pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 | Back alignment and structure |
|
| >pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 | Back alignment and structure |
|
| >pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 | Back alignment and structure |
|
| >pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 | Back alignment and structure |
|
| >pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 | Back alignment and structure |
|
| >pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 | Back alignment and structure |
|
| >pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 | Back alignment and structure |
|
| >pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 | Back alignment and structure |
|
| >pdb|3OCP|A Chain A, Crystal Structure Of Camp Bound Cgmp-Dependent Protein Kinase(92-227) Length = 139 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 | Back alignment and structure |
|
| >pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 | Back alignment and structure |
|
| >pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 6e-77
Identities = 65/337 (19%), Positives = 120/337 (35%), Gaps = 44/337 (13%)
Query: 78 LPPEGSRTVKVPSAKYE---LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD-HFF 133
L + T+ VP + + G K +D F + +DD FF
Sbjct: 2 LTMDVPPTIHVPLPPTSYPAFDAAIFTDIGG-----RKHQEDRFTLCPQLVPGRDDCAFF 56
Query: 134 GVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAV--------------------DACH 173
GVFDG G S+ VK + L+ + + E A
Sbjct: 57 GVFDGTV--GDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPATEVDEKLPQLLDQAVD 114
Query: 174 SSYLTTNSQL--HADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVD 231
Y +++L + L+ + +T+VT ++ + V + GDSR + +
Sbjct: 115 DMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVETPNGLNCEF 174
Query: 232 LSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMY 291
L++D P E R+ +G V L GD
Sbjct: 175 LTVDHKPDMPHEKLRIMRNGGSVEYLH----------NHNNKPFIRGGDFSFRKSRGEQP 224
Query: 292 PGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK- 350
++R+ G + G+ P++ V +T H +LA+DG+++ +S+ V++ +
Sbjct: 225 MQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQA 284
Query: 351 YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHIN 387
++ R+ A+V + D+IT + V
Sbjct: 285 RQEGRNPAQALVEMTLAEQQSRNQSADNITAMTVFFK 321
|
| >3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B* Length = 416 | Back alignment and structure |
|---|
Score = 226 bits (576), Expect = 6e-66
Identities = 91/433 (21%), Positives = 162/433 (37%), Gaps = 29/433 (6%)
Query: 333 DGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKNT 392
G+ E L V + + D + + + G
Sbjct: 7 AGLTELLQGFTVEVLRHQPADLLEFALQHFTRLQQENERKGAARFGHEGRTWGDAG---A 63
Query: 393 AVNQSIPPGVFLRTPVPQVIEVTGSESPSTFGWSSRNQRIRHDLSRAR-LRAIENSLENG 451
A IP P + E + N + + +R + A + +
Sbjct: 64 AAGGGIPSKGVNFAEEPMRSDSENGEEEEAAEAGAFNAPVINRFTRRASVCAEAYNPDEE 123
Query: 452 QIWVPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQG 511
+ S H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG
Sbjct: 124 EDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQG 183
Query: 512 GEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAV 571
+GD FYV+ G F++ + V + SFGELALMYN P A++ A
Sbjct: 184 DDGDNFYVIDRGTFDIYVKCDGVGRCVG------NYDNRGSFGELALMYNTPKAATITAT 237
Query: 572 TNGMLWALKREDFRGILMSEFSNLSS--LKLLRSVDLLSRLTILQLSHLADTLSEVSFSA 629
+ G LW L R FR I++ + + S+ L L + + + D + ++
Sbjct: 238 SPGALWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVVDVIGTKVYND 297
Query: 630 GQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEK 689
G+ I+ + + +I++ G+V+IT + + E++
Sbjct: 298 GEQIIAQGDLADSFFIVESGEVKIT--------------MKRKGKSEVEENGAVEIARCF 343
Query: 690 SEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSD 749
G YFGE L+ + +A A+ V C + + F+ ++GP +I +N Y
Sbjct: 344 -RGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIM--KRNIATYEEQ 400
Query: 750 IPKKPAKSIDISS 762
+ ++DI
Sbjct: 401 LVALFGTNMDIVE 413
|
| >3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus} Length = 299 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 9e-61
Identities = 78/314 (24%), Positives = 131/314 (41%), Gaps = 35/314 (11%)
Query: 437 SRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCM 496
S S+E K+ + I+ A+ D+ + L SQ ++DCM
Sbjct: 4 SHHHHHHGMASIEGRGSMQAFRK-FTKSERSKDLIKEAILDNDFMKNLELSQIQEIVDCM 62
Query: 497 QRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGEL 556
VE ++K+G G YV+ G+ EV K G + FGEL
Sbjct: 63 YPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVT-----KEGVKLCTMGPG-----KVFGEL 112
Query: 557 ALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFS--NLSSLKLLRSVDLLSRLTILQ 614
A++YN A+V+ + N LWA+ R+ F+ I+M + ++ L+SV L
Sbjct: 113 AILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEI 172
Query: 615 LSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHV 674
LS LAD L E + G+ I+ +II +G+V +T
Sbjct: 173 LSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVT-------------------R 213
Query: 675 EDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLT 734
ED + L +G +FGE L GE + + +A + V C ++ ++ F ++G L
Sbjct: 214 EDSPNEDPVFLR-TLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVIDRDSFKHLIGGLD 272
Query: 735 KISHDDQNSKDYSS 748
+S ++ +D +
Sbjct: 273 DVS--NKAYEDAEA 284
|
| >4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens} Length = 381 | Back alignment and structure |
|---|
Score = 203 bits (516), Expect = 4e-58
Identities = 96/389 (24%), Positives = 149/389 (38%), Gaps = 45/389 (11%)
Query: 362 VAESYRLWLQYETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQVIEVTGSESPS 421
V + + L + + H L+ Q + EV+ +
Sbjct: 30 VLKDCIVHLCISKPERPMKFLREHFEKLEKEENRQILARQKSNSQSDSHDEEVSPTPPNP 89
Query: 422 TFGWSSRNQRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERALHDHFLF 481
R R + A + E+ +V K ++ + +A+ + LF
Sbjct: 90 VVKARRR---------RGGVSAEVYTEEDAVSYVRKV--IPKDYKTMTALAKAISKNVLF 138
Query: 482 RKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRV 541
L D++ + D M V AG+ V++QG EGD FYVV GE +V NGE
Sbjct: 139 AHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVY-----VNGEWVTN 193
Query: 542 LQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILM--SEFSNLSSLK 599
+ SFGELAL+Y P A+V+A T+ LW + R+ +R ILM + +
Sbjct: 194 ISEG-----GSFGELALIYGTPRAATVKAKTDLKLWGIDRDSYRRILMGSTLRKRKMYEE 248
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
L V +L L + +AD L V F G+ IV E YII G +
Sbjct: 249 FLSKVSILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVL----- 303
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCA 719
+ E+ YFGE LL + T VA + C
Sbjct: 304 --------------QRRSPNEEYVEVG-RLGPSDYFGEIALLLNRPRAATVVARGPLKCV 348
Query: 720 ILTKEKFDLVVGPLTKISHDDQNSKDYSS 748
L + +F+ V+GP ++I +N + Y+S
Sbjct: 349 KLDRPRFERVLGPCSEIL--KRNIQRYNS 375
|
| >4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 | Back alignment and structure |
|---|
Score = 203 bits (517), Expect = 5e-58
Identities = 98/388 (25%), Positives = 157/388 (40%), Gaps = 66/388 (17%)
Query: 20 RIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQLNPELGITRLSRVSSQFLP 79
++ ++ S + A + + D E D I ++G L + + +P
Sbjct: 58 AFAKRQGKEMDSLRFLYDGIRIQADQAPEDLDMEDNDIIEAHREQIGGENLYFQAGKPIP 117
Query: 80 PEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGH 139
SQ G + N+D F + + +F V+DGH
Sbjct: 118 KISL-----------ENVGCASQIGKRKE-----NEDRFDFA---QLTDEVLYFAVYDGH 158
Query: 140 GEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDS-----MSG 194
G G + F + + ++ ++ ++L + + + SG
Sbjct: 159 G--GPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSG 216
Query: 195 TTAVTVLVR-GRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGAR 253
TTA L+R G + VA+ GDSRA+L R+GK + L+ID TP R+DE ER+K G
Sbjct: 217 TTATVALLRDGIELVVASVGDSRAILC-RKGK---PMKLTIDHTPERKDEKERIKKCGGF 272
Query: 254 VLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVAN 313
V + P + NG A TRSIGD +T GV+A
Sbjct: 273 V--------------------AWNSLGQPHV---NGRL---AMTRSIGDLDLKTSGVIAE 306
Query: 314 PEIVVWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQY 372
PE +L D F VL +DG+ ++SQ + D V + DP +A A+ ++ +QY
Sbjct: 307 PETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQA----IQY 362
Query: 373 ETRTDDITVIVVHING---LKNTAVNQS 397
T D+ T +VV KN+ +N S
Sbjct: 363 GT-EDNSTAVVVPFGAWGKYKNSEINFS 389
|
| >3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae} Length = 246 | Back alignment and structure |
|---|
Score = 196 bits (501), Expect = 1e-57
Identities = 77/272 (28%), Positives = 120/272 (44%), Gaps = 37/272 (13%)
Query: 467 EEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFE 526
+ +E+++ ++FLF KL ++++C++ V G ++KQG +GD FYVV G +
Sbjct: 1 QLQRLEKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVD 60
Query: 527 VMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRG 586
N SSFGELALMYN P A+V A ++ +LWAL R FR
Sbjct: 61 FY-----VNDNKVNSSGPG-----SSFGELALMYNSPRAATVVATSDCLLWALDRLTFRK 110
Query: 587 ILM--SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALY 644
IL+ S L LL+S+ +L LT + LAD L + G+TI+ + Y
Sbjct: 111 ILLGSSFKKRLMYDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGENFY 170
Query: 645 IIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEH 704
+I+ G V + ++ + + + + YFGE LL +
Sbjct: 171 LIEYGAVDV-------------------------SKKGQGVINKLKDHDYFGEVALLNDL 205
Query: 705 MGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736
T A A L K F ++GP +
Sbjct: 206 PRQATVTATKRTKVATLGKSGFQRLLGPAVDV 237
|
| >2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 2e-57
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 121 HTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTN 180
+ + +F V+DGHG G + F + + ++ ++ ++L +
Sbjct: 26 FDFAQLTDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEID 83
Query: 181 SQLHADVLDDS-----MSGTTAVTVLVR-GRTIYVANSGDSRAVLAERRGKEIVAVDLSI 234
+ + SGTTA L+R G + VA+ GDSRA+L R+GK + L+I
Sbjct: 84 KAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILC-RKGK---PMKLTI 139
Query: 235 DQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGT 294
D TP R+DE ER+K G V + P + NG
Sbjct: 140 DHTPERKDEKERIKKCGGFV--------------------AWNSLGQPHV---NGRL--- 173
Query: 295 AFTRSIGDSIAETIGVVANPEIVVWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAKYKD 353
A TRSIGD +T GV+A PE +L D F VL +DG+ ++SQ + D V + D
Sbjct: 174 AMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHD 233
Query: 354 PRDACAAIVAESYRLWLQYETRTDDITVIVVHING 388
P +A A+ ++ +QY T D+ T +VV
Sbjct: 234 PNEAAHAVTEQA----IQYGT-EDNSTAVVVPFGA 263
|
| >2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A* Length = 291 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 4e-57
Identities = 86/302 (28%), Positives = 127/302 (42%), Gaps = 36/302 (11%)
Query: 449 ENGQIWVPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVV 508
E+ +V K ++ A + +A+ + LF L D++ + D M V AG+ V+
Sbjct: 17 EDAASYVRKV--IPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVI 74
Query: 509 KQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASV 568
+QG EGD FYV+ GE +V N E + SFGELAL+Y P A+V
Sbjct: 75 QQGDEGDNFYVIDQGEMDVY-----VNNEWATSVGEG-----GSFGELALIYGTPRAATV 124
Query: 569 RAVTNGMLWALKREDFRGILMSEFSN--LSSLKLLRSVDLLSRLTILQLSHLADTLSEVS 626
+A TN LW + R+ +R ILM + L V +L L + +AD L V
Sbjct: 125 KAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALEPVQ 184
Query: 627 FSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELS 686
F GQ IV E +II G + + E+
Sbjct: 185 FEDGQKIVVQGEPGDEFFIILEGSAAVL-------------------QRRSENEEFVEVG 225
Query: 687 VEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDY 746
YFGE LL + T VA + C L + +F+ V+GP + I +N + Y
Sbjct: 226 -RLGPSDYFGEIALLMNRPKAATVVARGPLKCVKLDRPRFERVLGPCSDIL--KRNIQQY 282
Query: 747 SS 748
+S
Sbjct: 283 NS 284
|
| >2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 | Back alignment and structure |
|---|
Score = 189 bits (480), Expect = 3e-52
Identities = 72/309 (23%), Positives = 118/309 (38%), Gaps = 12/309 (3%)
Query: 71 SRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD 130
S+ S+ L + ++ E+ + S R P + + + +
Sbjct: 81 SQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKE----ASKL 136
Query: 131 HFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDD 190
+F G+ E + + L N D + + NS L+ VL
Sbjct: 137 YFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRV 196
Query: 191 SMSGTTAVTVLVRGRTIYVANSGDSRAVLAER-RGKEIVAVDLSIDQTPFREDELERVKL 249
+ SG TA V G ++VAN+GDSRA+L + AV LS D E EL+R+KL
Sbjct: 197 AFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKL 256
Query: 250 S-----GARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNG--MYPGTAFTRSIGD 302
V+ D++ GL P + D + + +G +T+ I
Sbjct: 257 EHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPP 316
Query: 303 SIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIV 362
+ + A PE+ L F VLA+DG++E + Q VV +V +Y I
Sbjct: 317 NYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIA 376
Query: 363 AESYRLWLQ 371
Y++ L
Sbjct: 377 VGGYKVTLG 385
|
| >2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 7e-52
Identities = 67/319 (21%), Positives = 119/319 (37%), Gaps = 76/319 (23%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD-HFFGVFDGHGEFGAQCSQFVKRK 153
LRY S +G+ + +D+ +D FF V+DGH G++ + +
Sbjct: 24 LRYGLSSMQGWRVE-----MEDAHTAVVGIPHGLEDWSFFAVYDGHA--GSRVANYCSTH 76
Query: 154 LCENLLRNNKFH-------------EDAVDACHSSYLTTNSQL---HADVLDDSMSGTTA 197
L E++ N F E+ + + +L + + SG+TA
Sbjct: 77 LLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTA 136
Query: 198 VTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTL 257
V V++ + IY N GDSRAVL R G+ + D P E ER++ +G V+
Sbjct: 137 VGVMISPKHIYFINCGDSRAVLY-RNGQ---VCFSTQDHKPCNPREKERIQNAGGSVMI- 191
Query: 258 DQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGD--------SIAETIG 309
R+ NG A +R++GD
Sbjct: 192 ------------------------QRV---NGSL---AVSRALGDYDYKCVDGKGPTEQL 221
Query: 310 VVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKY----KDPRDACAAIVAES 365
V PE+ + F +LA DG+++ +S++ + + V D + C +V
Sbjct: 222 VSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTC 281
Query: 366 YRLWLQYETRTDDITVIVV 384
D++++++V
Sbjct: 282 LHK-----GSRDNMSIVLV 295
|
| >2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 1e-51
Identities = 76/301 (25%), Positives = 118/301 (39%), Gaps = 70/301 (23%)
Query: 116 DSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAV-DACHS 174
D+ F FF V+DGHG GA+ +Q+ L L + A
Sbjct: 39 DAHNCILNF--DDQCSFFAVYDGHG--GAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKE 94
Query: 175 SYLTTNSQL-----------------HADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRA 217
++L ++ L +D SG TAV L+ G+ +YVAN+GDSR
Sbjct: 95 AFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRC 154
Query: 218 VLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGD 277
V+ R GK A+++S D P E +R++ +G RV ++G
Sbjct: 155 VVC-RNGK---ALEMSFDHKPEDTVEYQRIEKAGGRV----TLDG--------------- 191
Query: 278 DGDPPRLWVPNGMYPGTAFTRSIGD--------SIAETIGVVANPEIVVWELTNDHPFFV 329
R+ NG +R+IGD AE + A P+I + + F V
Sbjct: 192 -----RV---NGGL---NLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMV 240
Query: 330 LASDGVFEFLSSQAVVDMVAKY-----KDPRDACAAIVAESY-RLWLQYETRTDDITVIV 383
LA DG++ F++S+ VV V + C + T D++T I+
Sbjct: 241 LACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAII 300
Query: 384 V 384
V
Sbjct: 301 V 301
|
| >1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 7e-51
Identities = 69/315 (21%), Positives = 120/315 (38%), Gaps = 72/315 (22%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD-HFFGVFDGHGEFGAQCSQFVKRK 153
LRY S +G+ + +D+ + + FF V+DGH G+Q +++
Sbjct: 22 LRYGLSSMQGWRVE-----MEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEH 74
Query: 154 LCENLLRNNKFH--------EDAVDACHSSYLTTNSQLHA---DVLDDSMSGTTAVTVLV 202
L +++ N F E+ + + +L + + SG+TAV VL+
Sbjct: 75 LLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLI 134
Query: 203 RGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEG 262
+ Y N GDSR +L R K + D P E ER++ +G V+
Sbjct: 135 SPQHTYFINCGDSRGLLC-RNRK---VHFFTQDHKPSNPLEKERIQNAGGSVMI------ 184
Query: 263 LKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGD--------SIAETIGVVANP 314
R+ NG A +R++GD V P
Sbjct: 185 -------------------QRV---NGSL---AVSRALGDFDYKCVHGKGPTEQLVSPEP 219
Query: 315 EIVVWELTN-DHPFFVLASDGVFEFLSSQAVVDMVAKY----KDPRDACAAIVAESYRLW 369
E+ E + D F +LA DG+++ + ++ + D V D C +V
Sbjct: 220 EVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTC---- 275
Query: 370 LQYETRTDDITVIVV 384
L +R D+++VI++
Sbjct: 276 LYKGSR-DNMSVILI 289
|
| >3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 2e-48
Identities = 74/324 (22%), Positives = 131/324 (40%), Gaps = 83/324 (25%)
Query: 113 ANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN----------- 161
+ + F HFFGV+DGHG G+Q + + + ++ L
Sbjct: 35 QSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVANYCRERMHLALAEEIAKEKPMLSDG 92
Query: 162 NKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAE 221
+ + E A +S+L +S++ + + G+T+V +V I+VAN GDSRAVL
Sbjct: 93 DTWLEKWKKALFNSFLRVDSEIESVAPETV--GSTSVVAVVFPSHIFVANCGDSRAVLC- 149
Query: 222 RRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDP 281
R A+ LS+D P REDE R++ +G +V+ +
Sbjct: 150 RGKT---ALPLSVDHKPDREDEAARIEAAGGKVIQWNG---------------------- 184
Query: 282 PRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSS 341
R+ G+ A +RSIGD + ++ +PE+ + + +LASDGV++ ++
Sbjct: 185 ARV---FGVL---AMSRSIGDRYLKP-SIIPDPEVTAVKRVKEDDCLILASDGVWDVMTD 237
Query: 342 QAVVDMVAKY---------------------------KDPRDACAAIVAESYRLWLQYET 374
+ +M K A + + +Q +
Sbjct: 238 EEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLA----IQRGS 293
Query: 375 RTDDITVIVV---HINGLKNTAVN 395
+ D+I+V+VV LK+ +N
Sbjct: 294 K-DNISVVVVDLKPRRKLKSKPLN 316
|
| >2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 | Back alignment and structure |
|---|
Score = 172 bits (436), Expect = 6e-47
Identities = 72/382 (18%), Positives = 118/382 (30%), Gaps = 107/382 (28%)
Query: 96 RYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLC 155
S R Y D + F + + +GVF+G+ G + + FV ++L
Sbjct: 28 GVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYD--GNRVTNFVAQRLS 85
Query: 156 ENLLRNNKFHE-----------DAVDACHSSYLTTNSQLHADVLD--------------- 189
LL E A D S+L + A+
Sbjct: 86 AELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLP 145
Query: 190 ---------------DSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSI 234
+ G AV ++ +YVAN G +RA+L + + L++
Sbjct: 146 PQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNV 205
Query: 235 DQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGT 294
D T EDEL R+ G D G ++ + G
Sbjct: 206 DHTTENEDELFRLSQLG------------------------LDAGKIKQVGIICGQES-- 239
Query: 295 AFTRSIGD-------------SIAETIGVVANPEI-VVWELTNDHPFFVLASDGVFEFLS 340
TR IGD S A++ ++A PEI L F VL S+G+++ L
Sbjct: 240 --TRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALE 297
Query: 341 SQAVVDMV------------AKYKDPRDACAAIVAESYRLWL----------QYETRTDD 378
+ AK A+V R+ ++ R +D
Sbjct: 298 AAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHED 357
Query: 379 ITVIVVHINGLKNTAVNQSIPP 400
+T++V + + P
Sbjct: 358 MTLLVRNFGYPLGEMSQPTPSP 379
|
| >3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 2e-46
Identities = 76/308 (24%), Positives = 125/308 (40%), Gaps = 81/308 (26%)
Query: 122 TPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAV------------ 169
+P T HFFGV+DGHG G + + + + +L L + +D +
Sbjct: 54 SPSLTHLTGHFFGVYDGHG--GHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQ 111
Query: 170 --DACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 112 WDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 171
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL R + A+ LS+D P REDE R++ +G +V+
Sbjct: 172 DSRAVLF-RGKE---AMPLSVDHKPDREDEYARIENAGGKVIQWQG-------------- 213
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
R+ G+ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 214 --------ARV---FGVL---AMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 258
Query: 334 GVFEFLSSQAVVDMVAKY-----------------KDPRDACAAIVAESYRLWLQYETRT 376
G+++ +++Q V ++ + K AC A L LQ +
Sbjct: 259 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGS-K 317
Query: 377 DDITVIVV 384
D+I++IV+
Sbjct: 318 DNISIIVI 325
|
| >2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 3e-42
Identities = 51/368 (13%), Positives = 103/368 (27%), Gaps = 109/368 (29%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKL 154
Y +R ++ D + + + + GH G ++ +++
Sbjct: 23 QIYKDDGRRCEGYESRD--------KKCLCISDNNTSLYAILSGHN--GVTVAENALQEM 72
Query: 155 CENLLRNNKFHE-----------DAVDACHSSYLTTNSQLHADVLDDSM----------- 192
LL + + Y + + A +
Sbjct: 73 AAELLLGQLNVCNTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYE 132
Query: 193 --------------------SGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKE--IVAV 230
G++AV L+ +Y+ N G+ RA+L + + +
Sbjct: 133 ISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLC-KTDEHDTLTVT 191
Query: 231 DLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGM 290
LS+D +E R+ G + + + R G
Sbjct: 192 QLSVDHNLLNAEEAARLFRLGLMA------QNFEGVPLYST-----------RCI---GN 231
Query: 291 YPGTAFTRSIGD----SIAETIGVVANPEIV-VWELTNDHPFFVLASDGVFEFL------ 339
Y D S A V+ PEIV ++T F VL S G+ L
Sbjct: 232 Y---LGKAGYKDCNFLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPG 288
Query: 340 ----SSQAVVDMVAKY----KDPRDACAAIVAESYRLWLQYETRT------------DDI 379
++ +V M+++ ++V + + DD+
Sbjct: 289 DASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDV 348
Query: 380 TVIVVHIN 387
T+++ + N
Sbjct: 349 TLLIRNFN 356
|
| >3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B* Length = 161 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 3e-41
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 26 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 85
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ + V + SFGELALMYN P A++ A + G LW L
Sbjct: 86 DRGTFDIYVKCDGVGRCV------GNYDNRGSFGELALMYNTPRAATITATSPGALWGLD 139
Query: 581 REDFRGILMS 590
R FR I++
Sbjct: 140 RVTFRRIIVK 149
|
| >3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B* Length = 161 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 6e-13
Identities = 27/167 (16%), Positives = 51/167 (30%), Gaps = 25/167 (14%)
Query: 566 ASVRAVTNGMLWALKREDFRGILM--SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLS 623
ASV A + + I+ ++ + + + L L Q+S + D +
Sbjct: 4 ASVCAEAYN-PDEEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMF 62
Query: 624 EVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSK 683
E G+ +++ + Y+I RG I D + V +
Sbjct: 63 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRC-VGNYD-------------- 107
Query: 684 ELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVV 730
FGE L+ + T A L + F ++
Sbjct: 108 -------NRGSFGELALMYNTPRAATITATSPGALWGLDRVTFRRII 147
|
| >3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B* Length = 154 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 7e-41
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 438 RARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQ 497
R + A + E+ +V K ++ A + +A+ + LF L D++ + D M
Sbjct: 5 RGAISAEVYTEEDAASYVRKV--IPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMF 62
Query: 498 RVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELA 557
V AG+ V++QG EGD FYV+ GE +V N E + SFGELA
Sbjct: 63 PVSFIAGETVIQQGDEGDNFYVIDQGEMDVY-----VNNEWATSVGEG-----GSFGELA 112
Query: 558 LMYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
L+Y P A+V+A TN LW + R+ +R ILM
Sbjct: 113 LIYGTPRAATVKAKTNVKLWGIDRDSYRRILMG 145
|
| >3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B* Length = 154 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-11
Identities = 27/167 (16%), Positives = 58/167 (34%), Gaps = 31/167 (18%)
Query: 566 ASVRAVTNGMLWALKREDFRGILM--SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLS 623
++ A + ++ + + K + L S L + S + D +
Sbjct: 6 GAISAEV---YTEEDAASYVRKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMF 62
Query: 624 EVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSK 683
VSF AG+T++ + Y+I +G++ + + N S+
Sbjct: 63 PVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVN-----NEWATSVG-------------- 103
Query: 684 ELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVV 730
EG FGE L+ + T A +V + ++ + ++
Sbjct: 104 -------EGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRIL 143
|
| >3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A* Length = 139 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 1e-40
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
+ K+ + + I+ A+ D+ + L SQ ++DCM VE ++K+G G YV+
Sbjct: 11 YPKSPQSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVM 70
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G+ EV K G + FGELA++YN A+V+ + N LWA+
Sbjct: 71 EDGKVEVT-----KEGVKLCTMGPG-----KVFGELAILYNCTRTATVKTLVNVKLWAID 120
Query: 581 REDFRGILMS 590
R+ F+ I+M
Sbjct: 121 RQCFQTIMMR 130
|
| >3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A* Length = 139 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 4e-11
Identities = 19/133 (14%), Positives = 49/133 (36%), Gaps = 26/133 (19%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA 657
+ + D + L + Q+ + D + V + I+ + + +Y+++ G+V +T +
Sbjct: 22 KEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKE- 80
Query: 658 DLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVV 717
+C++ G FGE +L + T + +V
Sbjct: 81 ----GVKLCTM---------------------GPGKVFGELAILYNCTRTATVKTLVNVK 115
Query: 718 CAILTKEKFDLVV 730
+ ++ F ++
Sbjct: 116 LWAIDRQCFQTIM 128
|
| >3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 2e-36
Identities = 48/334 (14%), Positives = 88/334 (26%), Gaps = 101/334 (30%)
Query: 111 DKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAV- 169
+ D + + +FDG G + ++ + + L +E+ +
Sbjct: 29 SPHSDDVVVVEGMLRGRPETRVHAMFDGFQ--GRHSAMWLAQNVMNYLNDLRDVNEEEIT 86
Query: 170 DACHS----------------------------------SYLTTNSQLHADVLDDSMSGT 195
+ + +++ G
Sbjct: 87 RQFERMDGDLRAANLPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGP 146
Query: 196 TAVTVLVRG----------RTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELE 245
V + TI+VA+ G+SR VL A+ LS T E
Sbjct: 147 LMPVVAMNFRRDPRAAKGIYTIHVASLGNSRCVLK-SGRT---AIHLSTPHTASSHKERH 202
Query: 246 RVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGD--- 302
RV+ +G T++ + G+ TR+ G
Sbjct: 203 RVQAAGGVFTTVNGE------------------------LLLGGVV---PMTRAFGSFDF 235
Query: 303 -----SIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMV-----AKYK 352
+ V A P++ + V + G F S A + +
Sbjct: 236 KKGGQGKLQQDLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHAAIAAAIALYPVSPE 294
Query: 353 DPRDACAAIVAESYRLWLQYETR--TDDITVIVV 384
DA A+V + R R T +I+ V
Sbjct: 295 TVLDAAKAMVVNAKR-------RKVTKNISTFVR 321
|
| >2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 | Back alignment and structure |
|---|
Score = 132 bits (332), Expect = 1e-33
Identities = 59/341 (17%), Positives = 98/341 (28%), Gaps = 111/341 (32%)
Query: 116 DSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVK------------------------ 151
D+ + P + + VFDGH G SQ+
Sbjct: 29 DAILVSAPATSRPNVRIKAVFDGHA--GEATSQYCAKHAAKHLGKLSEFTFAEVKKACLS 86
Query: 152 ------------------------RKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHAD- 186
+L ++ N E A +++ + +
Sbjct: 87 LDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEE 146
Query: 187 -VLDDSMSGTTAVTVLV-------RGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTP 238
+ G V + N GDSRA L G LS D P
Sbjct: 147 EAEHPELVGRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGG---LTRLSKDHKP 203
Query: 239 FREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTR 298
E R++ +G V D PR+ +G+ A +R
Sbjct: 204 NHPTEASRIEKAGGSVE----------------------TFDVPRV---DGVL---ALSR 235
Query: 299 SIGD--------SIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSS-------QA 343
+ GD E V+A P++ + +LA DGV+E
Sbjct: 236 AFGDSDFKMNPNLPPEEQKVIAVPDVRQFYAL-SSDLLLLACDGVYEPSGMDWAYVRDLT 294
Query: 344 VVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVV 384
V +M D + A ++ +Y + D+I+V++V
Sbjct: 295 VAEMQRSKGDLEEVAARVMDYAYDM-----NSQDNISVMLV 330
|
| >2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens} Length = 134 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-25
Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Query: 459 SAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQ-RVEVQAGDIVVKQGGEGDCF 517
S+ ++ + +H F +T S L M V QAG I+++ G E D +
Sbjct: 2 SSGSSGDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSW 61
Query: 518 YVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRA-VTNGML 576
YV+ +G E+ L +SFG + + + VR V +
Sbjct: 62 YVILNGTVEI-----SHPDGKVENLFMG-----NSFGITPTLDKQYMHGIVRTKVDDCQF 111
Query: 577 WALKREDFRGIL 588
+ ++D+ IL
Sbjct: 112 VCIAQQDYWRIL 123
|
| >2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens} Length = 134 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 8e-11
Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 28/140 (20%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLSEVSF-SAGQTIVNMNEGVAALYIIQRGQVRITFD 656
L+ + + + +T+ L + AG I+ + + + Y+I G V I+
Sbjct: 15 LEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISHP 74
Query: 657 ADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVA-VDD 715
+ V +L G+ FG L + VDD
Sbjct: 75 -----DGKVENLF---------------------MGNSFGITPTLDKQYMHGIVRTKVDD 108
Query: 716 VVCAILTKEKFDLVVGPLTK 735
+ ++ + ++ + K
Sbjct: 109 CQFVCIAQQDYWRILNHVEK 128
|
| >1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2 Length = 469 | Back alignment and structure |
|---|
Score = 108 bits (269), Expect = 7e-25
Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 4/253 (1%)
Query: 442 RAIENSLENGQIWVPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEV 501
A + I ++ E+ I L F K + + C +
Sbjct: 11 HAAHSQSSAEWIACLDKRPLERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENL 70
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561
+ G + +QG G +Y V +G +V ++ + + + T ++FGE +++ N
Sbjct: 71 EKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTIC---TLGIGTAFGE-SILDN 126
Query: 562 KPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADT 621
P A++ + L +++EDF+ + ++ L + + ++ +
Sbjct: 127 TPRHATIVTRESSELLRIEQEDFKALWEKYRQYMAGLLAPPYGVMETGSNNDRIPDKENV 186
Query: 622 LSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQS 681
SE AG+ + A I R T+ + V + TQ+
Sbjct: 187 PSEKILRAGKILRIAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWMIQQTSCVHSRTQA 246
Query: 682 SKELSVEKSEGSY 694
V +G
Sbjct: 247 VGMWQVLLEDGVL 259
|
| >1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2 Length = 469 | Back alignment and structure |
|---|
Score = 102 bits (254), Expect = 6e-23
Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 12/153 (7%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQ-RVEVQAGDIVVKQGGEGDCFYV 519
++T ++ I L L+ + L + + G ++ QG EG +Y+
Sbjct: 325 GQRTVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYI 384
Query: 520 VGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGM-LWA 578
+ G V+ + V L FG+LAL+ + P AS+ +
Sbjct: 385 ILKGSVNVVIYGK----GVVCTLHEG-----DDFGKLALVNDAPRAASIVLREDNCHFLR 435
Query: 579 LKREDFRGILMSEFSNLSSLK-LLRSVDLLSRL 610
+ +EDF IL +N LK + V +L ++
Sbjct: 436 VDKEDFNRILRDVEANTVRLKEHDQDVLVLEKV 468
|
| >1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2 Length = 469 | Back alignment and structure |
|---|
Score = 50.3 bits (119), Expect = 2e-06
Identities = 45/280 (16%), Positives = 81/280 (28%), Gaps = 38/280 (13%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
+ + + + +L D R QA + +G +V
Sbjct: 208 HMIRDRKYHLKTYRQCCVGTELVDWMIQQTSCVHSRT--QAVGMWQVLLEDGVLNHVDQE 265
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
F+ R L + E ++ LQ ++ ++ A R
Sbjct: 266 RHFQ-------DKYLFYRFLDDEREDAPLPTEEEKKECDEELQDTMLLLSQMGPDAHMRM 318
Query: 583 DFRGILM--SEFSNLSSLKLLRSVDLLSRLTILQLSHLADTL-SEVSFSAGQTIVNMNEG 639
R + L + LS L+ LA L E G + N E
Sbjct: 319 ILRKPPGQRTVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEE 378
Query: 640 VAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWT 699
+ YII +G V + VC+L EG FG+
Sbjct: 379 GTSWYIILKGSVNVVIY----GKGVVCTLH---------------------EGDDFGKLA 413
Query: 700 LLGEHMGSLTAVAV-DDVVCAILTKEKFDLVVGPLTKISH 738
L+ + + + V D+ + KE F+ ++ + +
Sbjct: 414 LVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV 453
|
| >3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens} Length = 142 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 2e-21
Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 6/138 (4%)
Query: 475 LHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEK 534
L + F LTD Q + + G ++ K+ + D ++ G E+ +
Sbjct: 8 LRVYRFFASLTDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGA 67
Query: 535 NGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN 594
+ + + FG +L+ +S RA + + R +
Sbjct: 68 GSAANSTVC--SVVPGAIFGVSSLIKPYHYTSSARATKPVRVVDINGARLRE-MSENNQA 124
Query: 595 LSSLKLLRSV--DLLSRL 610
L L+ +V +L+RL
Sbjct: 125 L-GQVLMNNVAAAVLARL 141
|
| >3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens} Length = 142 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 9e-15
Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 18/133 (13%)
Query: 595 LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRIT 654
+ S + LR + LT QL +A E SF G I N L ++ G V +
Sbjct: 2 MISPERLRVYRFFASLTDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVELF 61
Query: 655 FDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVD 714
G+ ++ + G+ FG +L+ + + +A A
Sbjct: 62 -----------------YSNGGAGSAANSTVCSVV-PGAIFGVSSLIKPYHYTSSARATK 103
Query: 715 DVVCAILTKEKFD 727
V + +
Sbjct: 104 PVRVVDINGARLR 116
|
| >2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3} Length = 149 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 1e-19
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 469 AHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVM 528
H++ L + LF L D Q L M V + GD + +G GD YVV G+ ++
Sbjct: 1 GHMDDVLRRNPLFAALDDEQSAELRASMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLH 60
Query: 529 ATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
T + + V+ GEL+L P A+ A+T L AL D +
Sbjct: 61 RTSPDGRENMLAVVGPS-----ELIGELSLFDPGPRTATGTALTEVKLLALGHGDLQP-W 114
Query: 589 MSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFS 628
++ + + LLR ++R +L D +S++ FS
Sbjct: 115 LNVRPEV-ATALLR---AVAR----RLRKTNDAMSDLVFS 146
|
| >2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3} Length = 149 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 6e-13
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 23/129 (17%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
+LR L + L Q + L ++SEV+ + G T+ + + LY++ G+V++
Sbjct: 6 VLRRNPLFAALDDEQSAELRASMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLH----- 60
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVEK-SEGSYFGEWTLLGEHMGSLTAVAVDDVVC 718
DG +E + GE +L + T A+ +V
Sbjct: 61 -------------RTSPDG----RENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKL 103
Query: 719 AILTKEKFD 727
L
Sbjct: 104 LALGHGDLQ 112
|
| >3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT} Length = 187 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 1e-19
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 13/171 (7%)
Query: 458 SSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCF 517
K +EE I ++ LF ++ + L MQ ++ +G GD
Sbjct: 27 LGGADKYFEEILEI---VNKIKLFGDFSNEEVRYLCSYMQCYAAPRDCQLLTEGDPGDYL 83
Query: 518 YVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLW 577
++ +GE V+ K + + + GE++++ P AS A
Sbjct: 84 LLILTGEVNVIKDIPNKGIQTIAKVGAG-----AIIGEMSMIDGMPRSASCVASLPTDFA 138
Query: 578 ALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFS 628
L R+ L++ L + L+R + LL+ + D + +
Sbjct: 139 VLSRDALYQ-LLANMPKLGNKVLIRLLQLLTA----RFRESYDRILPKTLG 184
|
| >3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT} Length = 187 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 2e-14
Identities = 17/130 (13%), Positives = 47/130 (36%), Gaps = 21/130 (16%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA 657
L+++ + L + ++ +L + + ++ + L +I G+V +
Sbjct: 38 LEIVNKIKLFGDFSNEEVRYLCSYMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVI--- 94
Query: 658 DLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVV 717
+ + G Q+ ++ G+ GE +++ S + VA
Sbjct: 95 --------------KDIPNKGIQTIAKV----GAGAIIGEMSMIDGMPRSASCVASLPTD 136
Query: 718 CAILTKEKFD 727
A+L+++
Sbjct: 137 FAVLSRDALY 146
|
| >1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A Length = 138 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 2e-19
Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 20/137 (14%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE--KNGE 537
LF+KL + ++ ++ V AG ++ + G GD + V G V G
Sbjct: 18 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELGPGA 77
Query: 538 VPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS 597
FGE+AL+ +P A+V A T L +L DF+ L S + +
Sbjct: 78 F--------------FGEMALISGEPRSATVSAATTVSLLSLHSADFQM-LCSSSPEI-A 121
Query: 598 LKLLRSVDLLSRLTILQ 614
++ L R
Sbjct: 122 EIFRKT--ALERRGAAA 136
|
| >1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A Length = 138 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 8e-17
Identities = 30/159 (18%), Positives = 53/159 (33%), Gaps = 38/159 (23%)
Query: 579 LKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNE 638
++R DF + + +L+ +V L +L L + L + AG I + E
Sbjct: 1 VRRGDF----------VRNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGE 50
Query: 639 GVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEW 698
++ + G V + T + EL G++FGE
Sbjct: 51 PGDRMFFVVEGSVSVA------------------------TPNPVEL----GPGAFFGEM 82
Query: 699 TLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS 737
L+ S T A V L F ++ +I+
Sbjct: 83 ALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIA 121
|
| >2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa} Length = 154 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 2e-16
Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 15/163 (9%)
Query: 466 EEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEF 525
E + ++ L H LF L+ Q LL V + G V +QG FY + SG
Sbjct: 5 EFQRVHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCV 64
Query: 526 EVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQ-ASVRAVTNGMLWALKREDF 584
++ E ++ V ++F E + + P A+ +AV L+ + +
Sbjct: 65 KIYRLTPEGQEKILEVTNER-----NTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAY 119
Query: 585 RGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSF 627
+ + + L +L LL LS +L D + +S
Sbjct: 120 LR-QLQDNTPL-ALALLA---KLST----RLHQRIDEIETLSL 153
|
| >2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa} Length = 154 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 3e-12
Identities = 26/129 (20%), Positives = 44/129 (34%), Gaps = 24/129 (18%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
LL+S L L+ +QL L + V+ G + E A Y + G V+I
Sbjct: 13 LLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIY----- 67
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVEK-SEGSYFGEWTLL-GEHMGSLTAVAVDDVV 717
+ +G +E +E +E + F E + TA AV
Sbjct: 68 -------------RLTPEG----QEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQ 110
Query: 718 CAILTKEKF 726
+ + +
Sbjct: 111 LFRFSNKAY 119
|
| >4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A* Length = 333 | Back alignment and structure |
|---|
Score = 76.6 bits (188), Expect = 4e-15
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 7/126 (5%)
Query: 467 EEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFE 526
A +E L +F+ L +Q + AG ++++QG F ++ SG E
Sbjct: 8 TGARVED-LAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAE 66
Query: 527 VMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRG 586
V + +G ++ R + GE+AL+ + P A+V + W R F
Sbjct: 67 V--SHVGDDGVA--IIARALPGMI--VGEIALLRDSPRSATVTTIEPLTGWTGGRGAFAT 120
Query: 587 ILMSEF 592
++
Sbjct: 121 MVHIPG 126
|
| >4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A* Length = 333 | Back alignment and structure |
|---|
Score = 65.8 bits (160), Expect = 1e-11
Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 22/132 (16%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA 657
++ L +D+ L LA ++ + +AGQ ++ E + +I G ++
Sbjct: 12 VEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVS--- 68
Query: 658 DLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVV 717
HV DDG G GE LL + S T ++ +
Sbjct: 69 ---------------HVGDDGVAIIARA----LPGMIVGEIALLRDSPRSATVTTIEPLT 109
Query: 718 CAILTKEKFDLV 729
+ F +
Sbjct: 110 GWTGGRGAFATM 121
|
| >1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2 Length = 137 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 4e-15
Identities = 16/118 (13%), Positives = 43/118 (36%), Gaps = 13/118 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF + + + + ++ +V++G + + G E + T ++G
Sbjct: 13 LFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFY- 71
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQ---------ASVRAVTNGMLWALKREDFRGIL 588
R ++ G+ L + + +V+A+T +AL ++ + +
Sbjct: 72 ---NRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVA 126
|
| >1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2 Length = 137 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 4e-10
Identities = 25/144 (17%), Positives = 42/144 (29%), Gaps = 29/144 (20%)
Query: 595 LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRIT 654
S +R V L + L + + L F+ +V + V + I RG++
Sbjct: 2 SSGSSGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLES- 60
Query: 655 FDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSL------ 708
V DG +S EG + G+ L
Sbjct: 61 -------------------VTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPS 101
Query: 709 ---TAVAVDDVVCAILTKEKFDLV 729
T A+ +V L ++ V
Sbjct: 102 STRTVKALTEVEAFALIADELKFV 125
|
| >4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus} Length = 160 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 1e-14
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
FR +D L Q V GD++ G D V SG EV+ ++ EV
Sbjct: 34 AFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVI-----QDDEVV 88
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQ--ASVRAVTNGMLWALKREDFRGILMS--EFSNL 595
+L K FG++ Q A+VRA+T L +KR+ + +L FS+
Sbjct: 89 AIL-----GKGDVFGDVFWKEATLAQSCANVRALTYCDLHVIKRDALQKVLEFYTAFSHS 143
Query: 596 SSLKLLRSVDLLSRL 610
S L+ + +L R+
Sbjct: 144 FSRNLILTYNLRKRI 158
|
| >4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus} Length = 160 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 28/134 (20%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA 657
K+ + + L LA V + G I + E V +L + G + +
Sbjct: 26 RKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEV---- 81
Query: 658 DLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTA--VAVDD 715
+ + V L +G FG+ + A A+
Sbjct: 82 -IQDDEVVAILG---------------------KGDVFGDVFWKEATLAQSCANVRALTY 119
Query: 716 VVCAILTKEKFDLV 729
++ ++ V
Sbjct: 120 CDLHVIKRDALQKV 133
|
| >3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A* Length = 227 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 3e-13
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 30/170 (17%)
Query: 469 AHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVM 528
+H++ L +F+ + S L +Q V+ G V +G GD Y++ SG+ ++
Sbjct: 2 SHMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIG 61
Query: 529 ATQEE---------KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWAL 579
+ ++ FGEL++ P +S +T ++
Sbjct: 62 RRAPDGRENLLTIMGPSDM--------------FGELSIFDPGPRTSSATTITEVRAVSM 107
Query: 580 KREDFRGILMS------EFSNLSSLKLLRSVDLLSRLTILQLSH-LADTL 622
R+ R + + + + +L R+ + L+ L + +A L
Sbjct: 108 DRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQL 157
|
| >3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A* Length = 227 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 23/128 (17%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
+L + + ++ L L V F G T+ E LYII G+V+I
Sbjct: 7 ILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIG----- 61
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMGSLTAVAVDDVVC 718
DG +E + FGE ++ + +A + +V
Sbjct: 62 -------------RRAPDG----RENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRA 104
Query: 719 AILTKEKF 726
+ ++
Sbjct: 105 VSMDRDAL 112
|
| >2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus} Length = 198 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 6e-13
Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
F + ++ ++ Q D V+++G GD + + G +++ + +G +
Sbjct: 78 FFVGADSNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIMS----DGVIA 133
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLK 599
L S FGE+ L+ + ASV+ T L++L + F +L EF +
Sbjct: 134 TSLSDG-----SYFGEICLLTRERRVASVKCETYCTLFSLSVQHFNQVL-DEFPAMRKTM 187
Query: 600 LLRSVDLLSRL 610
+V L+R+
Sbjct: 188 EEIAVRRLTRI 198
|
| >2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus} Length = 198 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 23/132 (17%), Positives = 37/132 (28%), Gaps = 25/132 (18%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA 657
L+ SV ++ + L F ++ ++ IQ+G V I
Sbjct: 70 RDLVASVPFFVGADSNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIMS- 128
Query: 658 DLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVV 717
SL +GSYFGE LL +
Sbjct: 129 ---DGVIATSLS---------------------DGSYFGEICLLTRERRVASVKCETYCT 164
Query: 718 CAILTKEKFDLV 729
L+ + F+ V
Sbjct: 165 LFSLSVQHFNQV 176
|
| >3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B Length = 212 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 1e-12
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMA 529
H+ + L LF + L ++ G+ +++QG Y V SG EV+
Sbjct: 72 HLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVL- 130
Query: 530 TQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQ--ASVRAVTNGMLWALKREDFRGI 587
K+ V +L K G +L + ++ A+V+A+T L + + R +
Sbjct: 131 ----KDNTVLAIL-----GKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYISLKGLREV 181
Query: 588 L 588
L
Sbjct: 182 L 182
|
| >3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B Length = 212 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 6e-04
Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 28/131 (21%)
Query: 601 LRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
L + L + L L+ + + G+ ++ + + A+Y + G + + L
Sbjct: 77 LLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEV-----LK 131
Query: 661 SNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTA--VAVDDVVC 718
N + L +G G +L E + A A+
Sbjct: 132 DNTVLAILG---------------------KGDLIGSDSLTKEQVIKTNANVKALTYCDL 170
Query: 719 AILTKEKFDLV 729
++ + V
Sbjct: 171 QYISLKGLREV 181
|
| >3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656} Length = 220 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 27/166 (16%), Positives = 64/166 (38%), Gaps = 14/166 (8%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNG-EV 538
L+ L +Q ++ D + V+ G I+ + +V SG+ + G E+
Sbjct: 10 LWNDLNTAQKKLISDNLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSD--EGREI 67
Query: 539 PRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS-- 596
L R + +M + + ++ A + LW + E ++G +M + + ++
Sbjct: 68 --TLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWIIPAEIYKG-IMKDSAPVANY 124
Query: 597 -----SLKLLRSVDLLSRLTILQLSH-LADTLSEVSFSAGQTIVNM 636
+ + + L+ ++ L +A L E + G + +
Sbjct: 125 TNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKI 170
|
| >3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656} Length = 220 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 6e-09
Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 25/133 (18%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA 657
+ L + L Q ++D L G I N N L +++ GQ+R
Sbjct: 2 MSFENYFPLWNDLNTAQKKLISDNLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTY--- 58
Query: 658 DLLSNANVCSLKSDLHVEDDGTQSSKELS---VEKSEGSYFGEWTLLGEHMGSLTAVAVD 714
+ D+G +E++ + + ++ +T A
Sbjct: 59 ---------------ILSDEG----REITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEK 99
Query: 715 DVVCAILTKEKFD 727
D I+ E +
Sbjct: 100 DTDLWIIPAEIYK 112
|
| >4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus} Length = 216 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 12/155 (7%)
Query: 475 LHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEK 534
+ LF L + + L QR G + QG G Y+V SG+ + T
Sbjct: 1 MKGSPLFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGG 60
Query: 535 NGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS---- 590
+L FGE++L+ AS AV + L AL RED+ ++
Sbjct: 61 QERTLALLGPG-----ELFGEMSLLDEGERSASAVAVEDTELLALFREDYLALIRRLPLV 115
Query: 591 --EFSNLSSLKLLRSVDLLSRLTILQLSH-LADTL 622
+ L + +L + L L+ + + +A L
Sbjct: 116 AHNLAALLARRLREADLELDLLSFEEARNRVAYAL 150
|
| >4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus} Length = 216 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 4e-11
Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 23/127 (18%)
Query: 601 LRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
++ L L ++ + G+ I + ALY++ G+VR+
Sbjct: 1 MKGSPLFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLF------ 54
Query: 661 SNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMGSLTAVAVDDVVCA 719
G +E ++ G FGE +LL E S +AVAV+D
Sbjct: 55 ------------RTHLGG----QERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELL 98
Query: 720 ILTKEKF 726
L +E +
Sbjct: 99 ALFREDY 105
|
| >3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300} Length = 231 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 3e-12
Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 14/154 (9%)
Query: 469 AHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVM 528
++ L LF+ + + L + Q ++VV+Q EG+ ++V +G V
Sbjct: 3 GRLDD-LKRSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVS 61
Query: 529 ATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
V + GE A++ ++ ASVRA+T L RE F +
Sbjct: 62 RVSLGGRERVLGDIYAP-----GVVGETAVLAHQERSASVRALTPVRTLMLHREHFEL-I 115
Query: 589 MSEFSNLSSLKLLRSVDLLS---RLTILQLSHLA 619
+ + L +L+ +L
Sbjct: 116 LRRHPRV-LWNLAE---MLARRVTFLNDELIAFG 145
|
| >3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300} Length = 231 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-10
Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 23/134 (17%)
Query: 595 LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRIT 654
+ L L+ L + + ++E +F + +V + AL+++ G VR++
Sbjct: 2 VGRLDDLKRSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVS 61
Query: 655 FDADLLSNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMGSLTAVAV 713
V G +E + GE +L S + A+
Sbjct: 62 ------------------RVSLGG----RERVLGDIYAPGVVGETAVLAHQERSASVRAL 99
Query: 714 DDVVCAILTKEKFD 727
V +L +E F+
Sbjct: 100 TPVRTLMLHREHFE 113
|
| >3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A* Length = 202 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 8e-12
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 15/123 (12%)
Query: 471 IERALHDHF-----LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEF 525
I LF + +L ++ Q GD ++++G G Y + G
Sbjct: 65 IVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVV 124
Query: 526 EVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
V+ G L S FGE+ L+ ASVRA T L++L ++F
Sbjct: 125 SVL-----TKGNKEMKLSDG-----SYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFN 174
Query: 586 GIL 588
+L
Sbjct: 175 EVL 177
|
| >3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A* Length = 202 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 26/132 (19%), Positives = 41/132 (31%), Gaps = 26/132 (19%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA 657
KL+ S+ L + ++ + L F G I+ +Y IQ G V +
Sbjct: 71 RKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK- 129
Query: 658 DLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVV 717
L +GSYFGE LL + + A
Sbjct: 130 ----GNKEMKLS---------------------DGSYFGEICLLTRGRRTASVRADTYCR 164
Query: 718 CAILTKEKFDLV 729
L+ + F+ V
Sbjct: 165 LYSLSVDNFNEV 176
|
| >2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 8e-12
Identities = 58/296 (19%), Positives = 91/296 (30%), Gaps = 86/296 (29%)
Query: 112 KANQDSFCIHTPFGTSQDDHFFGVFDGHG--EFGAQCSQFVKRKLCENLLRNNKFH-EDA 168
NQD F + DG G G S+ L + + +
Sbjct: 19 SNNQDFINQ---FENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEI 75
Query: 169 VDACHSSYLTTNSQLHADVLDDSMS--GTTAVTVLVRGRTIYVANSGDSRAVLAERRGKE 226
D S T N +++ D GTT V + G I A+ GDSR +
Sbjct: 76 RDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGI------- 128
Query: 227 IVAVDLSIDQTPFREDELERVKLSGARVLTLD-----------QIEGLKNPDVQCWGTEE 275
R+ E LT D Q+ TEE
Sbjct: 129 ------------VRQGEYHL--------LTSDHSLVNELVKAGQL------------TEE 156
Query: 276 GDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELT-NDHPFFVLASDG 334
P + + T+SIG P++ V L D + V+ SDG
Sbjct: 157 EAASHPQKNII----------TQSIG------QANPVEPDLGVHLLEEGD--YLVVNSDG 198
Query: 335 VFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETR--TDDITVIVVHING 388
+ LS+ + ++ + K D ++ + R D+ITV +V++
Sbjct: 199 LTNMLSNADIATVLTQEKTLDDKNQDLITLANH-------RGGLDNITVALVYVES 247
|
| >1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-11
Identities = 59/312 (18%), Positives = 103/312 (33%), Gaps = 101/312 (32%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHG--EFGAQCSQFVKR 152
LRY+ S RG N+DS + DG G G SQ V
Sbjct: 5 LRYAARSDRGLVRAN----NEDSVYA--------GARLLALADGMGGHAAGEVASQLVIA 52
Query: 153 KLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDS----MSGTTAVTVLVRGRTIY 208
L L +++ D + ++ NS + A V + M GTT +L G +
Sbjct: 53 ALAH--LDDDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGM-GTTLTAILFAGNRLG 109
Query: 209 VANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLD---------- 258
+ + GDSR L R+ EL + +T D
Sbjct: 110 LVHIGDSRGYL-------------------LRDGELTQ--------ITKDDTFVQTLVDE 142
Query: 259 -QIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIV 317
+I T E P R + R++ E P +
Sbjct: 143 GRI------------TPEEAHSHPQRSLI----------MRALTGHEVE-------PTLT 173
Query: 318 VWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETR- 375
+ E D ++L SDG+ + +S + +++ + + ++ ++ + R
Sbjct: 174 MREARAGDR--YLLCSDGLSDPVSDETILEALQI-PEVAESAHRLIELALR-------GG 223
Query: 376 -TDDITVIVVHI 386
D++TV+V +
Sbjct: 224 GPDNVTVVVADL 235
|
| >3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli} Length = 260 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 13/173 (7%)
Query: 458 SSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCF 517
+ +++ + L + TD L + + ++ QG + +
Sbjct: 31 MDSPDLGTDDDDKAMADIGSMVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETL 90
Query: 518 YVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELAL-MYNKPLQASVRAVTNGML 576
Y + G V+ EE + L + GEL L + A VRA T +
Sbjct: 91 YYIVKGSVAVLIKDEEGKEMILSYLNQG-----DFIGELGLFEEGQERSAWVRAKTACEV 145
Query: 577 WALKREDFRGILMS------EFSNLSSLKLLRSVDLLSRLTILQLSH-LADTL 622
+ + FR ++ S + +L + + + L L ++ +A TL
Sbjct: 146 AEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTL 198
|
| >3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli} Length = 260 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 24/133 (18%)
Query: 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFD 656
++ + S+ L T L + + T+++ E LY I +G V +
Sbjct: 44 AMADIGSMVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVL-- 101
Query: 657 ADLLSNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMG-SLTAVAVD 714
+++G KE+ + ++G + GE L E S A
Sbjct: 102 ----------------IKDEEG----KEMILSYLNQGDFIGELGLFEEGQERSAWVRAKT 141
Query: 715 DVVCAILTKEKFD 727
A ++ +KF
Sbjct: 142 ACEVAEISYKKFR 154
|
| >3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A* Length = 237 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 14/153 (9%)
Query: 475 LHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEK 534
+ L R L + LL G+ + Q + +VV G ++
Sbjct: 13 ARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTG 72
Query: 535 NGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN 594
+ V V R SFGE + N P S AVT + + F LM
Sbjct: 73 SEAVVSVFTRG-----ESFGEAVALRNTPYPVSAEAVTPCEVMHIPSPVFVS-LMRRDPE 126
Query: 595 LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSF 627
+ + +L L L L ++
Sbjct: 127 I-CISILA---TTFG----HLHSLVAQLEQLKA 151
|
| >3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A* Length = 237 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 23/136 (16%)
Query: 593 SNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVR 652
++ + + R+ L+ L + L S+ G+T+ E A++++ G V+
Sbjct: 5 AHEAQKAIARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVK 64
Query: 653 ITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMGSLTAV 711
+ + G E V + G FGE L ++A
Sbjct: 65 LF------------------RMTPTG----SEAVVSVFTRGESFGEAVALRNTPYPVSAE 102
Query: 712 AVDDVVCAILTKEKFD 727
AV + F
Sbjct: 103 AVTPCEVMHIPSPVFV 118
|
| >1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2 Length = 213 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 5e-11
Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 13/166 (7%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
+ LL C + + + G+IV Q + ++ G + +NG+
Sbjct: 6 IHHHHHHMDLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEG--TLKTEHVSENGKT- 62
Query: 540 RVLQRYTAEKLSSFGELALMYNKP-LQASVRAVTNGMLWALKREDFRGILMS------EF 592
+ ++ + ++P +V A N + ++ +E F +LM F
Sbjct: 63 LEIDEIKPVQI--IASGFIFSSEPRFPVNVVAGENSKILSIPKEVFLDLLMKDRELLLFF 120
Query: 593 SNLSSLKLLRSVDLLSRLTILQLSH-LADTLSEVSFSAGQTIVNMN 637
S + L LT L L + L + + +
Sbjct: 121 LKDVSEHFRVVSEKLFFLTTKTLREKLMNFLVRHMNEKRELTLPVT 166
|
| >1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2 Length = 213 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 8e-09
Identities = 18/128 (14%), Positives = 42/128 (32%), Gaps = 24/128 (18%)
Query: 601 LRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
+ S + + L L + F G+ + + ++ + + I+ G ++
Sbjct: 1 MGSDKIHHHHHHMDLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTE------ 54
Query: 661 SNANVCSLKSDLHVEDDGTQSSKELSVEK-SEGSYFGEWTLL-GEHMGSLTAVAVDDVVC 718
HV ++G K L +++ + E + VA ++
Sbjct: 55 ------------HVSENG----KTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSKI 98
Query: 719 AILTKEKF 726
+ KE F
Sbjct: 99 LSIPKEVF 106
|
| >3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ... Length = 210 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 6e-11
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 13/151 (8%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
L + TD L + + ++ QG + + Y + G V+ EE +
Sbjct: 3 LGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMIL 62
Query: 540 RVLQRYTAEKLSSFGELAL-MYNKPLQASVRAVTNGMLWALKREDFRGILMS------EF 592
L + GEL L + A VRA T + + + FR ++
Sbjct: 63 SYLNQG-----DFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRL 117
Query: 593 SNLSSLKLLRSVDLLSRLTILQLSH-LADTL 622
S + +L + + + L L ++ +A TL
Sbjct: 118 SAQMARRLQVTSEKVGNLAFLDVTGRIAQTL 148
|
| >3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ... Length = 210 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 2e-08
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 24/126 (19%)
Query: 604 VDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNA 663
+ L T L + + T+++ E LY I +G V +
Sbjct: 1 MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVL--------- 51
Query: 664 NVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMG-SLTAVAVDDVVCAIL 721
+++G KE+ + ++G + GE L E S A A +
Sbjct: 52 ---------IKDEEG----KEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 98
Query: 722 TKEKFD 727
+ +KF
Sbjct: 99 SYKKFR 104
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 2e-10
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 731 GPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIG---- 786
K + ++ K++ + + K + S L + K L G
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTL--------GTGSF 54
Query: 787 ----LVLLRDSENFLSLKRFSKQKVKCLGKEVQ-VLKEKNLMKSVSPSACVPQILCTCAD 841
LV ++S N ++K KQKV L K+++ L EK ++++V+ V ++ + D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKL-KQIEHTLNEKRILQAVNFPFLV-KLEFSFKD 112
Query: 842 SMHAGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899
+ + +++ + S L E ARF AA +V E LH ++YR + P+ L
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 900 MLDKSGHLQ 908
++D+ G++Q
Sbjct: 173 LIDQQGYIQ 181
|
| >2byv_E RAP guanine nucleotide exchange factor 4; EPAC2, CAMP-GEF2, CAMP, cyclic nucleotide, regulation, auto-inhibition, CDC25 homology domain; 2.7A {Mus musculus} Length = 999 | Back alignment and structure |
|---|
Score = 64.1 bits (155), Expect = 2e-10
Identities = 25/128 (19%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
++ E+ I L F K + + C ++ G + +QG G +Y V
Sbjct: 30 LERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAV 89
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
+G +V ++ + + + T ++FGE +++ N P A++ + L ++
Sbjct: 90 LAGSLDVKVSETSSHQDAVTIC---TLGIGTAFGE-SILDNTPRHATIVTRESSELLRIE 145
Query: 581 REDFRGIL 588
+EDF+ +
Sbjct: 146 QEDFKALW 153
|
| >2byv_E RAP guanine nucleotide exchange factor 4; EPAC2, CAMP-GEF2, CAMP, cyclic nucleotide, regulation, auto-inhibition, CDC25 homology domain; 2.7A {Mus musculus} Length = 999 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 3e-06
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 11/141 (7%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQ-RVEVQAGDIVVKQGGEGDCFYV 519
++T ++ I L L+ + L + + G ++ QG EG +Y+
Sbjct: 325 GQRTVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYI 384
Query: 520 VGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVR-AVTNGMLWA 578
+ G V+ + G V + + FG+LAL+ + P AS+ N
Sbjct: 385 ILKGSVNVVIYGK---GVVCTLHEG------DDFGKLALVNDAPRAASIVLREDNCHFLR 435
Query: 579 LKREDFRGILMSEFSNLSSLK 599
+ +EDF IL +N LK
Sbjct: 436 VDKEDFNRILRDVEANTVRLK 456
|
| >3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa} Length = 227 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 2e-10
Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 15/166 (9%)
Query: 466 EEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEF 525
E + ++ L H LF L+ Q LL V + G V +QG FY + SG
Sbjct: 2 EFQRVHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCV 61
Query: 526 EVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPL-QASVRAVTNGMLWALKREDF 584
++ E ++ V ++F E + + P A+ +AV L+ + +
Sbjct: 62 KIYRLTPEGQEKILEVTNER-----NTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAY 116
Query: 585 RGILMSEFSNLS-------SLKLLRSVDLLSRLTILQLSH-LADTL 622
+ + + L+ S +L + +D + L++ +H + L
Sbjct: 117 LR-QLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYL 161
|
| >3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa} Length = 227 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 6e-09
Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 24/130 (18%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
LL+S L L+ +QL L + V+ G + E A Y + G V+I
Sbjct: 10 LLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIY----- 64
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLL-GEHMGSLTAVAVDDVV 717
+ +G +E +E +E + F E + TA AV
Sbjct: 65 -------------RLTPEG----QEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQ 107
Query: 718 CAILTKEKFD 727
+ + +
Sbjct: 108 LFRFSNKAYL 117
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 3e-10
Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 2/182 (1%)
Query: 727 DLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIG 786
D + + + + + +I+ ++ D E K + E+
Sbjct: 27 DGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQ 86
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
LV + + ++K SK ++ +E+++M + S V Q+ D +
Sbjct: 87 LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLY 145
Query: 847 LLLNTYLACPLASILHT-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
+++ L +++ + E+ ARF A VV AL+ +H G ++R V PD ++LDKSG
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 205
Query: 906 HL 907
HL
Sbjct: 206 HL 207
|
| >2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2 Length = 232 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 30/159 (18%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE------ 533
++ L + + +L +Q + V +G + + + G+ +++
Sbjct: 17 VWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHIS 76
Query: 534 ---KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
K G+ FG + ++ AV N + A+ E +L
Sbjct: 77 RIVKPGQF--------------FGMRPYFAEETCSSTAIAVENSKVLAIPVEAIEALLKG 122
Query: 591 ------EFSNLSSLKLLRSVDLLSRLTILQLSH-LADTL 622
F + +L + LT + LA+TL
Sbjct: 123 NTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETL 161
|
| >2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2 Length = 232 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 23/125 (18%)
Query: 604 VDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNA 663
D+ S L + L + T+ + + L+ + G+++I
Sbjct: 15 RDVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKIL--------- 65
Query: 664 NVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILT 722
G + G +FG E S TA+AV++ +
Sbjct: 66 ---------REGVYG----RFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIP 112
Query: 723 KEKFD 727
E +
Sbjct: 113 VEAIE 117
|
| >3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV} Length = 230 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 5e-10
Identities = 26/162 (16%), Positives = 46/162 (28%), Gaps = 33/162 (20%)
Query: 474 ALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE 533
+ + L L R V + G Y V SG ++A +++
Sbjct: 12 TVRNATPSLTLDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDD 71
Query: 534 ---------KNGEVPRVLQRYTAEKLSSFGELALMY-NKPLQASVRAVTNGMLWALKRED 583
+GE GE+ L + + +R T L + E
Sbjct: 72 DRELVLGYFGSGEF--------------VGEMGLFIESDTREVILRTRTQCELAEISYER 117
Query: 584 FRGILMSEFSNLS---SLKLLRSVDLLS---RLTILQLSHLA 619
+ + + S + + LS T + S LA
Sbjct: 118 LQQLFQTSLSPDAPRILYAIGV---QLSKRLLDTTRKASRLA 156
|
| >3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV} Length = 230 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 21/141 (14%), Positives = 36/141 (25%), Gaps = 24/141 (17%)
Query: 589 MSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQR 648
MS + +R+ L + + + + LY +
Sbjct: 1 MSLGNTTVVTTTVRNATPSLTLDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVIS 60
Query: 649 GQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMG- 706
G V I EDD +EL + G + GE L E
Sbjct: 61 GSVSII------------------AEEDDD----RELVLGYFGSGEFVGEMGLFIESDTR 98
Query: 707 SLTAVAVDDVVCAILTKEKFD 727
+ A ++ E+
Sbjct: 99 EVILRTRTQCELAEISYERLQ 119
|
| >1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1 Length = 222 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 7e-10
Identities = 23/149 (15%), Positives = 44/149 (29%), Gaps = 22/149 (14%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
+ L + G +V G+ + +VV G V EE+ E+
Sbjct: 7 IANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEER--EI- 63
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLK 599
L T+ F + V A + F + ++ +
Sbjct: 64 -SLFYLTSG--DMFCMHSG-------CLVEATERTEVRFADIRTFEQ-KLQTCPSM-AWG 111
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFS 628
L+ +L R L+ T+ ++ F
Sbjct: 112 LIA---ILGR----ALTSCMRTIEDLMFH 133
|
| >1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1 Length = 222 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 10/129 (7%), Positives = 31/129 (24%), Gaps = 31/129 (24%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
+ ++ + L + G + ++++ G++R+
Sbjct: 1 MPPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVY----- 55
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVEK-SEGSYFGEWTLLGEHMGSLTAVAVDDVVC 718
+ + +E+S+ + G F A +
Sbjct: 56 --------------LVGEE----REISLFYLTSGDMFCM-------HSGCLVEATERTEV 90
Query: 719 AILTKEKFD 727
F+
Sbjct: 91 RFADIRTFE 99
|
| >3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Length = 355 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 1e-09
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 16/139 (11%)
Query: 457 SSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDC 516
R + + A+ LF+KL + ++ ++ V AG ++ + G GD
Sbjct: 215 YQEVRRGDFVRNWQLVAAVP---LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDR 271
Query: 517 FYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGML 576
+ V G V + G + FGE+AL+ +P A+V A T L
Sbjct: 272 MFFVVEGSVSVATPNPVELGPG------------AFFGEMALISGEPRSATVSAATTVSL 319
Query: 577 WALKREDFRGILMSEFSNL 595
+L DF+ +L S +
Sbjct: 320 LSLHSADFQ-MLCSSSPEI 337
|
| >3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Length = 355 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 6e-06
Identities = 29/148 (19%), Positives = 46/148 (31%), Gaps = 35/148 (23%)
Query: 586 GILMSEFSN-------LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNE 638
GIL + F + + +L+ +V L +L L + L + AG I + E
Sbjct: 208 GILATGFYQEVRRGDFVRNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGE 267
Query: 639 GVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEW 698
++ + G V + VE G++FGE
Sbjct: 268 PGDRMFFVVEGSVSVATPNP----------------------------VELGPGAFFGEM 299
Query: 699 TLLGEHMGSLTAVAVDDVVCAILTKEKF 726
L+ S T A V L F
Sbjct: 300 ALISGEPRSATVSAATTVSLLSLHSADF 327
|
| >2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 1e-09
Identities = 56/314 (17%), Positives = 92/314 (29%), Gaps = 108/314 (34%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDG---HGEFGAQCSQFVK 151
L + + +G + NQD+ D + V DG G A S
Sbjct: 6 LSAATATDQGPVREN----NQDACLA--------DGILYAVADGFGARGHH-A--SATAL 50
Query: 152 RKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDS----MSGTTAVTVLVRGR-T 206
+ L D + N ++ + D+ TAV V G+
Sbjct: 51 KTLSAGFAA-----APDRDGLLEAVQQANLRVFELLGDEPTVSGT-TLTAVAVFEPGQGG 104
Query: 207 IYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLD-------- 258
V N GDS R+ +E+ LT D
Sbjct: 105 PLVVNIGDSPLYR-------------------IRDGHMEQ--------LTDDHSVAGELV 137
Query: 259 ---QIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPE 315
+I T P R + TR++G IG P+
Sbjct: 138 RMGEI------------TRHEARWHPQRHLL----------TRALG------IGPHIGPD 169
Query: 316 IVVWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYET 374
+ + D +++SDG+F +VD DP+ A +V +
Sbjct: 170 VFGIDCGPGDR--LLISSDGLFAAADEALIVDAATS-PDPQVAVRRLVEVAND------- 219
Query: 375 R--TDDITVIVVHI 386
+D+ TV+V+ +
Sbjct: 220 AGGSDNTTVVVIDL 233
|
| >1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2 Length = 232 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 25/177 (14%), Positives = 48/177 (27%), Gaps = 21/177 (11%)
Query: 471 IERALHDHFLFRKLTDSQCHVLLDC--MQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVM 528
+ L LF+ L +LD + ++ +AG+ ++K G + G E+
Sbjct: 16 MFDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKG--EIS 73
Query: 529 ATQEEKNGEVPRVLQRYTAEKLSS---FGELALMY-NKPLQASVRAVTNGMLWALKREDF 584
K E++ + +L N +S A T + +
Sbjct: 74 IVTNAKEN------IYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCISKAFV 127
Query: 585 RGILMS------EFSNLSSLKLLRSVDLLSRLTILQLSH-LADTLSEVSFSAGQTIV 634
L + N+ S + L L L +
Sbjct: 128 LSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKT 184
|
| >1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2 Length = 232 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 19/133 (14%), Positives = 41/133 (30%), Gaps = 26/133 (19%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLS--EVSFSAGQTIVNMNEGVAALYIIQRGQVRITF 655
L + L L + + D + + AG+TI+ L + +G++ I
Sbjct: 17 FDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVT 76
Query: 656 DADLLSNANVCSLKSDLHVEDDGTQSSKELSVEK-SEGSYFGEWTLLGEHMG-SLTAVAV 713
+A + +E+ +L G + + + VA
Sbjct: 77 NA------------------KEN----IYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH 114
Query: 714 DDVVCAILTKEKF 726
+V ++K
Sbjct: 115 TEVHTVCISKAFV 127
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 2e-09
Identities = 85/563 (15%), Positives = 163/563 (28%), Gaps = 150/563 (26%)
Query: 16 PRDARIRIKEPQQTTSRTTNEIAVFSPASSSSDGPDAETRDQISQLNPELGITRLSRVSS 75
R + + + R N+ VF+ + S P + R + +L P + +
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL----IDG 157
Query: 76 QFLPPEGS-RTVKVPSA----KYELRYSF----LSQRGYYPDALDKANQDSFCIH-TPFG 125
GS +T K + + F L+ + P
Sbjct: 158 VL----GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 126 TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCEN---LLRN--NKFHEDAVD-ACHSSYLTT 179
TS+ DH + A+ + +K K EN +L N N +A + +C LTT
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC-KILLTT 272
Query: 180 NSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPF 239
V D + TT L L K ++ L
Sbjct: 273 RF---KQVTDFLSAATTTHISLD-----------HHSMTLTPDEVKSLLLKYLDC----- 313
Query: 240 REDELERVKLSGARVLTLDQI-EGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTR 298
R +L R L+ L I E ++ D W T
Sbjct: 314 RPQDLPREVLTTN-PRRLSIIAESIR---------------DGLATWDNWKHVNCDKLTT 357
Query: 299 SIGDSIA-----------ETIGV----VANPEIV---VW-ELTNDHPFFVLAS------- 332
I S+ + + V P I+ +W ++ V+
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417
Query: 333 -----DGVFE----FLSSQAVVD--------MVAKYKDPR----DACAAIVAESYRLWLQ 371
+ +L + ++ +V Y P+ D + Y +
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY--FYS 475
Query: 372 YETRTDDITVIVVHINGLKNTAVNQSIPPGVFLRTPVPQVIEVTGSESPSTFGWSSRNQR 431
+ I H+ +++ ++ VFL F + Q+
Sbjct: 476 H---------IGHHLKNIEHPE-RMTLFRMVFL-----------------DFRFLE--QK 506
Query: 432 IRHD-LSRARLRAIENSLENGQIWVPSSSAHRK-TWEEEAHIERALHD--HFLFRKLTDS 487
IRHD + +I N+L+ + + + + + ER ++ FL + +
Sbjct: 507 IRHDSTAWNASGSILNTLQQLKFY-------KPYICDNDPKYERLVNAILDFLPKIEENL 559
Query: 488 QCHVLLDCMQRVEVQAGDIVVKQ 510
C D ++ + + + ++
Sbjct: 560 ICSKYTDLLRIALMAEDEAIFEE 582
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 5e-08
Identities = 88/708 (12%), Positives = 185/708 (26%), Gaps = 263/708 (37%)
Query: 232 LSIDQTPFRED-------ELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRL 284
LS+ + F ++ ++ + LS + D I K+ RL
Sbjct: 22 LSVFEDAFVDNFDCKDVQDMPKSILSKEEI---DHIIMSKDAVSGTL-----------RL 67
Query: 285 -WVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSS-- 341
W + + + + + +P + P S ++
Sbjct: 68 FWTLL-SKQEEMVQKFVEEVLRINYKFLMSP----IKTEQRQP-----SMMTRMYIEQRD 117
Query: 342 --QAVVDMVAKYKDPRDACAAIVAESY---RLWLQYETRTDDITVIVVH----------- 385
+ AKY R + Y R L +++
Sbjct: 118 RLYNDNQVFAKYNVSR-------LQPYLKLRQALL---ELRPAKNVLIDGVLGSGKTWVA 167
Query: 386 INGLKNTAVNQSIPPGVF------LRTPVPQV---------IEVTGSESPSTFGWSSRNQ 430
++ + V + +F +P + I+ + S N
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD----HSSNI 223
Query: 431 RIRHDLSRARLRAI------ENSL---ENGQIWVPSSSAHRKTWEEEAHIERALHDHFLF 481
++R +A LR + EN L N + + K W + F
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLN--VQ------NAKAW-----------NAF-- 262
Query: 482 RKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE-------- 533
+ C +L + V + + T +E
Sbjct: 263 ----NLSCKIL--------LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310
Query: 534 ---KNGEVPRV-------------------------LQRYTAEKLSSFGELAL------- 558
+ ++PR + +KL++ E +L
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 559 ---MYNK----PLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLT 611
M+++ P A + + ++W + +++++ S ++ + + +
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE-KQPKESTISIP 429
Query: 612 ILQLSHLADTLSEVSFSAGQTIVNMNEGVAALY--IIQRGQVRITFDADLLSNANVCSLK 669
+ L E AL+ I+ + TFD+D L
Sbjct: 430 SIYLELKVK----------------LENEYALHRSIVDHYNIPKTFDSDDLIP------- 466
Query: 670 SDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLV 729
D YF ++ +G H+ ++ + + +F
Sbjct: 467 ----PYLDQ---------------YF--YSHIGHHLKNIEHPERMTLFRMVFLDFRF--- 502
Query: 730 VGPL-TKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDME-WRKCLYSTDCSEIGL 787
L KI HD S + +L ++ ++ Y D
Sbjct: 503 ---LEQKIRHDSTAWNASGSILN---------------TLQQLKFYKP--YICDNDPKYE 542
Query: 788 VLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQI 835
L+ +FL K E+NL+ S + +I
Sbjct: 543 RLVNAILDFL---------PKI---------EENLIC--SKYTDLLRI 570
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 7e-07
Identities = 69/503 (13%), Positives = 147/503 (29%), Gaps = 135/503 (26%)
Query: 461 HRKTWE--EEAHIERALHDHFL--FRKLTDSQCHVLLDCMQRV----EVQAGDIVVKQGG 512
H +E E + + + F F + C + D + + E+ D ++
Sbjct: 5 HHMDFETGEHQYQYKDILSVFEDAFVD--NFDCKDVQDMPKSILSKEEI---DHIIMSKD 59
Query: 513 EGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKP-LQASVRAV 571
+ F + +++E ++Q+ F E L N L + ++
Sbjct: 60 AVSGTLRL----FWTLLSKQE------EMVQK--------FVEEVLRINYKFLMSPIKTE 101
Query: 572 TNGMLWALKREDF---RGILMSEFSNLSSLKLLRSVDLLS-RLTILQLSH---------- 617
++ + R L ++ + + R L R +L+L
Sbjct: 102 QRQP--SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL 159
Query: 618 ------LA-DTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCS-LK 669
+A D M+ + + + + L + +
Sbjct: 160 GSGKTWVALDVCLSYKV-----QCKMDFKI---FWLNLKNCNSP-ETVLEMLQKLLYQID 210
Query: 670 SDLHVEDDGTQSSK-ELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDV-----------V 717
+ D + + K + ++E + + L + + +V
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSK---PYENCL--LVLLNVQNAKAWNAFNLS 265
Query: 718 CAIL--TKEK--FDLVVGPLTK-ISHDDQN---SKDYS------------SDIPKKPAKS 757
C IL T+ K D + T IS D + + D D+P++ +
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE-VLT 324
Query: 758 ID---ISSLAKVSLTDM-----EWRKCLYS--TDCSEIGLVLLRDSE---NFLSLKRFSK 804
+ +S +A+ S+ D W+ T E L +L +E F L F
Sbjct: 325 TNPRRLSIIAE-SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP 383
Query: 805 QKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP 864
+L L+ + V ++ + +H L+ SI
Sbjct: 384 S-AHI---PTILLS---LIWFDVIKSDVMVVV----NKLHKYSLVEKQPKESTISIPSIY 432
Query: 865 LDEQSARFCAASVVAALEDLHKR 887
L+ + + LH+
Sbjct: 433 LELKVK-------LENEYALHRS 448
|
| >2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 8e-09
Identities = 61/296 (20%), Positives = 110/296 (37%), Gaps = 90/296 (30%)
Query: 112 KANQDSFCIHTPFGTSQDDHFFGVFDGHG--EFGAQCSQFVKRKLCENLLRNNKFH-EDA 168
K+NQD+F I FF V DG G G + S+ + + L + + D
Sbjct: 14 KSNQDAFYIDEK-----HQRFFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDP 68
Query: 169 VDACHSSYLTTNSQLHADVLDDS----MSGTTAVTVLV--RGRTIYVANSGDSRAVLAER 222
V ++L N + +S M GTTAV +L+ +G + A+ GDSR
Sbjct: 69 VTLLRQAFLAANHAIVEQQRQNSARADM-GTTAVVILLDEKGDRAWCAHVGDSRIYR--- 124
Query: 223 RGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLD-----------QIEGLKNPDVQCW 271
+R+D+L++ +T D +
Sbjct: 125 ----------------WRKDQLQQ--------ITSDHTWIAQAVQLGSL----------- 149
Query: 272 GTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELT-NDHPFFVL 330
T E P R + ++ +G ++ +I +L D +L
Sbjct: 150 -TIEQARQHPWRHVL----------SQCLG------REDLSQIDIQPIDLEPGDR--LLL 190
Query: 331 ASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHI 386
SDG+ E L+ + +++ + + A AA+V + + R D++TV+V+ +
Sbjct: 191 CSDGLTEELTDDVISIYLSE-PNVQKAAAALVDAA----KTHGGR-DNVTVVVISV 240
|
| >2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A* Length = 220 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 22/165 (13%)
Query: 475 LHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEK 534
L D L L + +L + I+ E + ++V SG V E+K
Sbjct: 6 LTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDK 65
Query: 535 NGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN 594
E L A + F +A ++A+ + + +F+ ++ EF
Sbjct: 66 --EF--TLAILEAGDI--FCTHT-------RAFIQAMEDTTILYTDIRNFQN-IVVEFPA 111
Query: 595 LS-------SLKLLRSVDLLSRLTILQLSH-LADTLSEVSFSAGQ 631
S L S+ +++ L LA+ L + + G
Sbjct: 112 FSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGL 156
|
| >2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A* Length = 220 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 18/128 (14%), Positives = 36/128 (28%), Gaps = 31/128 (24%)
Query: 601 LRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
L +LL L + S + E +S + N +++++ G+VR+
Sbjct: 6 LTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVY------ 59
Query: 661 SNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMGSLTAVAVDDVVCA 719
+ + KE ++ G F A++D
Sbjct: 60 -------------LAYED----KEFTLAILEAGDIFCT-------HTRAFIQAMEDTTIL 95
Query: 720 ILTKEKFD 727
F
Sbjct: 96 YTDIRNFQ 103
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 27/180 (15%)
Query: 745 DYSSDIPKKPAKSIDI----SSLAKVSLTDMEWRKCL----YSTDCSEIGLVLLRDSENF 796
D ++ P+ A S+ K D ++ K L +ST + L +
Sbjct: 2 DGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFST----VVLARELATSRE 57
Query: 797 LSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACV--------PQILCTCADSMHAGLL 848
++K K+ + K V +E+++M + V + L G L
Sbjct: 58 YAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL 117
Query: 849 LNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
L Y+ DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q
Sbjct: 118 L-KYIRK------IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQ 170
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 2e-08
Identities = 43/222 (19%), Positives = 82/222 (36%), Gaps = 26/222 (11%)
Query: 703 EHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYS----SDIPKKPAKSI 758
+ A++ V ++ K+ + P + + + SD + +
Sbjct: 119 ACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWK 178
Query: 759 DISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLK 818
++ +++ D + + E+ D+ ++K K+++K E L
Sbjct: 179 NVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN 238
Query: 819 EKNLMKSVSPSAC-----------VPQILCTCADSMHAGLLLNTYLACPLASIL--HTPL 865
E+ ++ VS C P L D M+ G L L H
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG---------DLHYHLSQHGVF 289
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E RF AA ++ LE +H R V+YR + P ++LD+ GH+
Sbjct: 290 SEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHV 331
|
| >3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A Length = 250 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 14/129 (10%), Positives = 41/129 (31%), Gaps = 26/129 (20%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
++ + I +L + F+ G ++ E + ++ + G++++
Sbjct: 10 FCGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLD----- 64
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMGSLTAVAVDDVVC 718
+ +DG E + S G+ G ++ A A++
Sbjct: 65 -------------IIFEDG----SEKLLYYAGGNSLIGKLYPTGN---NIYATAMEPTRT 104
Query: 719 AILTKEKFD 727
+++
Sbjct: 105 CWFSEKSLR 113
|
| >3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A Length = 250 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 9e-08
Identities = 17/161 (10%), Positives = 39/161 (24%), Gaps = 19/161 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGE-- 537
+ + G V+ G E + G+ ++ E +G
Sbjct: 16 PDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFE--DGSEK 73
Query: 538 VPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS------E 591
+ S G+L A+ + R + + E
Sbjct: 74 LLYYAGGN-----SLIGKLYPT---GNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFE 125
Query: 592 FSNLSSLKLLRSVDLLSRLTILQLSH-LADTLSEVSFSAGQ 631
K+ ++ + + + E+ S G+
Sbjct: 126 IFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGK 166
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
+ + ARF A +V A++ +H+ G ++R + PD ++LD+ GH+
Sbjct: 159 IPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHI 201
|
| >2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2 Length = 207 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 4e-08
Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 34/159 (21%)
Query: 484 LTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE---------K 534
+ LL R A ++ G + + + G ++ ++
Sbjct: 1 MKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLN 60
Query: 535 NGEVPRVLQRYTAEKLSSFGELAL----MYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
+G+ FGEL L + A VRA + + FR +
Sbjct: 61 SGDF--------------FGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQ 106
Query: 591 ------EFSNLSSLKLLRSVDLLSRLTILQLSH-LADTL 622
+ + +L ++ + L L ++ +A TL
Sbjct: 107 DSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTL 145
|
| >2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2 Length = 207 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 27/123 (21%)
Query: 610 LTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLK 669
+ + L L ++A TI+ + L+ I +G V I
Sbjct: 1 MKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTIL--------------- 45
Query: 670 SDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMG----SLTAVAVDDVVCAILTKE 724
+DDG +E+ + + G +FGE L + S A + A ++
Sbjct: 46 ---IEDDDG----REMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYA 98
Query: 725 KFD 727
KF
Sbjct: 99 KFR 101
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 6e-08
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
L E+ ARF A +V A++ +H+ ++R + PD +++D +GH+
Sbjct: 172 LPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHI 214
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 8e-08
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 13/128 (10%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACV--------PQILCT 838
+R + + K+ K+++K E L EK +++ V+ V LC
Sbjct: 202 ACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261
Query: 839 CADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
M+ G L + + E A F AA + LEDLH+ ++YR + P+
Sbjct: 262 VLTLMNGGDLKFH-----IYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPEN 316
Query: 899 LMLDKSGH 906
++LD GH
Sbjct: 317 ILLDDHGH 324
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 2e-07
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
E A F A +V+ LE LH+R ++YR + P+ ++LD G+
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN 327
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 3e-07
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
A+F AA V ALE LH + ++YR + P+ ++LDK+GH+
Sbjct: 104 PNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHI 145
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 3e-07
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
L E+ ARF +A + AL LH+RG++YR + D ++LD GH+
Sbjct: 107 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 149
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 3e-07
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E+ ARF A +V+ALE LH R V+YR + + LMLDK GH+
Sbjct: 103 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHI 144
|
| >3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A* Length = 243 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 4e-07
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 30/139 (21%)
Query: 592 FSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQV 651
S++ + ++ ++ + +F +TI + +Y + +G V
Sbjct: 18 GSHMIVTQDKALANVFRQMATGAFPPVV-----ETFERNKTIFFPGDPAERVYFLLKGAV 72
Query: 652 RITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVE-KSEGSYFGEWTLLGEHMG--SL 708
+++ V + G +E++V E S FG +LL +
Sbjct: 73 KLS------------------RVYEAG----EEITVALLRENSVFGVLSLLTGNKSDRFY 110
Query: 709 TAVAVDDVVCAILTKEKFD 727
AVA V E+ +
Sbjct: 111 HAVAFTPVELLSAPIEQVE 129
|
| >3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A* Length = 243 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 22/181 (12%), Positives = 46/181 (25%), Gaps = 42/181 (23%)
Query: 480 LFRKLTDSQCHVLLDCMQRVE----------VQAGDIVVKQGGEGDCFYVVGSGEFEVMA 529
+ +Q L + +++ + + G + Y + G ++
Sbjct: 17 RGSHMIVTQDKALANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSR 76
Query: 530 TQEE---------KNGEVPRVLQRYTAEKLSSFGELALMYNK--PLQASVRAVTNGMLWA 578
E + V FG L+L+ A T L +
Sbjct: 77 VYEAGEEITVALLRENSV--------------FGVLSLLTGNKSDRFYHAVAFTPVELLS 122
Query: 579 LKREDFRGILMS------EFSNLSSLKLLRSVDLLSRLTILQLSH-LADTLSEVSFSAGQ 631
E L S ++L++ ++ L + L L + G
Sbjct: 123 APIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGV 182
Query: 632 T 632
Sbjct: 183 P 183
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 4e-07
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
DE ARF AA +++AL LH +G++YR + D ++LD GH
Sbjct: 121 FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHC 163
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 5e-07
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
L E+ ARF +A + AL LH+RG++YR + D ++LD GH+
Sbjct: 150 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 192
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 5e-07
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
D A F AA ++ L+ LH +G++YR + D ++LDK GH+
Sbjct: 115 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHI 157
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 5e-07
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E + +V ALE LHK G++YR + + ++LD +GH+
Sbjct: 157 TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHV 198
|
| >2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus} Length = 202 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 6e-07
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 10/143 (6%)
Query: 492 LLDCMQRVEVQAGDIVVKQGGEG--DCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEK 549
+ + V +AGD+++ G G D Y V G + A EE N R+++
Sbjct: 1 MTQVRETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPG---- 56
Query: 550 LSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSR 609
FGE AL + A T+ L L +L + + S L + + R
Sbjct: 57 -GFFGEEALF-GQERIYFAEAATDVRLEPLPENPDPELLK-DLAQHLSQGLAEAYRRIER 113
Query: 610 LTILQLSH-LADTLSEVSFSAGQ 631
L +L + +A L E+S +
Sbjct: 114 LATQRLKNRMAAALLELSETPLA 136
|
| >2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus} Length = 202 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 24/112 (21%), Positives = 36/112 (32%), Gaps = 26/112 (23%)
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAA--LYIIQRGQVRITFDADLLSNANVCSLKSDLHVE 675
+ VSF AG I+ Y + G VR+ V+
Sbjct: 1 MTQVRETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLE------------------AVD 42
Query: 676 DDGTQSSKELSVE-KSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKF 726
++G L++ G +FGE L G+ A A DV L +
Sbjct: 43 EEG----NALTLRLVRPGGFFGEEALFGQE-RIYFAEAATDVRLEPLPENPD 89
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 7e-07
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E+ +F A + AL+ LH G++YR + P+ ++LD+ GH+
Sbjct: 124 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHI 165
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 7e-07
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E A F AA + L L +G++YR + D +MLD GH+
Sbjct: 118 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHI 160
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 9e-07
Identities = 12/42 (28%), Positives = 26/42 (61%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E++ + +V AL+ L + +++R + PD ++LD+ GH+
Sbjct: 113 KEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHV 154
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 9e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
E ARF AA + +AL LH ++YR + P+ ++LD GH
Sbjct: 137 LEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH 177
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 1e-06
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E +A F A + AL LH++G++YR + P+ +ML+ GH+
Sbjct: 119 MEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHV 160
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E A F AA + L L +G++YR + D +MLD GH+
Sbjct: 439 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHI 481
|
| >3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 52/278 (18%), Positives = 78/278 (28%), Gaps = 85/278 (30%)
Query: 124 FGTSQDDHFFGVFDG-----HGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLT 178
GT D + V DG G+ A +Q L DAV A
Sbjct: 4 VGTGGDKAYCVVVDGMGGMIRGDE-A--AQRALSASVGVLDAGGSP-LDAVLA------- 52
Query: 179 TNSQLHADVLDDSMS---GTTAVTVLV--RGRTIYVANSGDSRAVLAERRGKEIVAVDLS 233
+ +H + G T V R T+ A+ GD R L
Sbjct: 53 AQAAVHRWASQGGILGRTGATMAVAAVNLRDGTLEWASVGDCRVYL-------------- 98
Query: 234 IDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPG 293
F+ L R L+LD E G P P
Sbjct: 99 -----FKGGRLSR--------LSLDHNV------SS----EMVLLGRGPVPG-PA----- 129
Query: 294 TAFTRSIGDSIAETIGVVANPEIVVWELT-----NDHPFFVLASDGVFEFLSSQAVVDMV 348
+ I IG+ EI E + ++ SDGV+ L + +
Sbjct: 130 ----GEM---ITSFIGIENLTEISTSEAPLPLEAGEG--VLVVSDGVYRSLHEDRIAMAL 180
Query: 349 AKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHI 386
++ D R + A + D+ T+ +V +
Sbjct: 181 SRGSDARGILQEVEA------QGRPYQ-DNATLALVIL 211
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 2e-06
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 17/130 (13%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS-PSACVPQILCTCADSMHA 845
L + S+ L+LK K +++ G E Q+ +E + + P+ + ++ D+
Sbjct: 27 LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN--ILRLYGYFHDATRV 84
Query: 846 GLL--------LNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPD 897
L+ + L + DEQ + AL H + V++R + P+
Sbjct: 85 YLILEYAPLGTVYRELQ------KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 138
Query: 898 VLMLDKSGHL 907
L+L +G L
Sbjct: 139 NLLLGSAGEL 148
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 3e-06
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 866 DEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHL 907
E ARF A +V+AL+ LH ++ V+YR + + LMLDK GH+
Sbjct: 246 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 288
|
| >3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus} Length = 694 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 6e-06
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 11/141 (7%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQ-RVEVQAGDIVVKQGGEGDCFYV 519
++T ++ I L L+ + L + + G ++ QG EG +Y+
Sbjct: 20 GQRTVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYI 79
Query: 520 VGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVR-AVTNGMLWA 578
+ G V+ G V + + FG+LAL+ + P AS+ N
Sbjct: 80 ILKGSVNVVIYG---KGVVCTLHEG------DDFGKLALVNDAPRAASIVLREDNCHFLR 130
Query: 579 LKREDFRGILMSEFSNLSSLK 599
+ +EDF IL +N LK
Sbjct: 131 VDKEDFNRILRDVEANTVRLK 151
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
DEQ + + AL H+R V++R + P+ L++ G L
Sbjct: 111 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGEL 153
|
| >3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A Length = 195 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 25/132 (18%)
Query: 501 VQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE---------KNGEVPRVLQRYTAEKLS 551
+ + +G E Y + G V+ + G+
Sbjct: 4 FARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDY------------- 50
Query: 552 SFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLT 611
FGE AL K + + A+T ++ L+ + + + ++ R + L
Sbjct: 51 -FGEEAL-EGKAYRYTAEAMTEAVVQGLEPRAMDHEALHRVARNLARQMRRVQAYEAHLQ 108
Query: 612 ILQLSH-LADTL 622
+L +A L
Sbjct: 109 TGELRARIARYL 120
|
| >3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A Length = 195 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 24/103 (23%)
Query: 626 SFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKEL 685
F+ +TI E LY ++ G VR+ + DG + +
Sbjct: 3 RFARKETIYLRGEEARTLYRLEEGLVRVV------------------ELLPDG----RLI 40
Query: 686 SVE-KSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFD 727
++ G YFGE L G+ TA A+ + V L D
Sbjct: 41 TLRHVLPGDYFGEEALEGKAY-RYTAEAMTEAVVQGLEPRAMD 82
|
| >3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii} Length = 194 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 7e-05
Identities = 25/152 (16%), Positives = 46/152 (30%), Gaps = 10/152 (6%)
Query: 474 ALHDHF-LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQE 532
AL +H F LTD L Q +V+ + ++K G Y V G +
Sbjct: 7 ALINHIRKFIFLTDEDAGTLSAFFQLKKVRKKETLLKTGEICRINYFVVKG--CLRLFFI 64
Query: 533 EKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEF 592
++ G ++ E +A +P +++V N L ++ + L
Sbjct: 65 DEKGI--EQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSITYTEQE-NLFERI 121
Query: 593 SNLSSLKLLRSVDLLSRLTILQLSHLADTLSE 624
L L + +
Sbjct: 122 PALERYFRL----VYQKSFAAAQLRSKFQHMY 149
|
| >2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A Length = 238 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 8/108 (7%), Positives = 27/108 (25%), Gaps = 25/108 (23%)
Query: 622 LSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQS 681
+ F + I N + + G ++T + ++G
Sbjct: 18 IKPKQFHKKELIFNQWDPQEYCIFLYDGITKLT------------------SISENG--- 56
Query: 682 SKELSVE-KSEGSYFGEWTLLGEHMGSLTAVAV--DDVVCAILTKEKF 726
++++ + E + V + ++ +
Sbjct: 57 -TIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINEL 103
|
| >2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A Length = 238 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 13/145 (8%), Positives = 42/145 (28%), Gaps = 14/145 (9%)
Query: 496 MQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGE 555
++ + +++ Q + + G T +NG + +Y +
Sbjct: 18 IKPKQFHKKELIFNQWDPQEYCIFLYDG--ITKLTSISENGT--IMNLQY-YKGAFVIMS 72
Query: 556 LALMYNKPLQASVRAVT--NGMLWALKREDFRGILMS------EFSNLSSLKLLRSVDLL 607
+ + V + +K + + +L ++ S+
Sbjct: 73 GFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKF 132
Query: 608 SRLTILQLSH-LADTLSEVSFSAGQ 631
+ +I + L +++ G+
Sbjct: 133 NDFSINGKLGSICSQLLILTYVYGK 157
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
H L + V+ L LH G+++ + P ++LD+ G +
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGV 250
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 7e-04
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
H L + V+ L LH G+++ + P ++LD+ G +
Sbjct: 199 THKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGV 245
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 908 | ||||
| d1a6qa2 | 295 | d.219.1.1 (A:2-296) Protein serine/threonine phosp | 1e-28 | |
| d1ne6a1 | 136 | b.82.3.2 (A:109-244) Regulatory subunit of Protein | 1e-22 | |
| d1ne6a1 | 136 | b.82.3.2 (A:109-244) Regulatory subunit of Protein | 2e-07 | |
| d1cx4a1 | 136 | b.82.3.2 (A:130-265) Regulatory subunit of Protein | 5e-22 | |
| d1txoa_ | 235 | d.219.1.1 (A:) putative serine/threonine phosphata | 1e-16 | |
| d1cx4a2 | 147 | b.82.3.2 (A:266-412) Regulatory subunit of Protein | 2e-15 | |
| d1cx4a2 | 147 | b.82.3.2 (A:266-412) Regulatory subunit of Protein | 1e-12 | |
| d1ne6a2 | 132 | b.82.3.2 (A:245-376) Regulatory subunit of Protein | 3e-14 | |
| d1ne6a2 | 132 | b.82.3.2 (A:245-376) Regulatory subunit of Protein | 2e-09 | |
| d1o7fa2 | 155 | b.82.3.2 (A:13-167) Regulatory domain of Epac2, do | 2e-13 | |
| d1o7fa3 | 124 | b.82.3.2 (A:322-445) Regulatory domain of Epac2, d | 4e-13 | |
| d1o7fa3 | 124 | b.82.3.2 (A:322-445) Regulatory domain of Epac2, d | 4e-04 | |
| d1i5za2 | 132 | b.82.3.2 (A:6-137) Catabolite gene activator prote | 3e-12 | |
| d1i5za2 | 132 | b.82.3.2 (A:6-137) Catabolite gene activator prote | 5e-04 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-10 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-10 | |
| d2gaua2 | 142 | b.82.3.2 (A:10-151) Transcriptional regulator PG03 | 2e-10 | |
| d2gaua2 | 142 | b.82.3.2 (A:10-151) Transcriptional regulator PG03 | 5e-04 | |
| d1wgpa_ | 137 | b.82.3.2 (A:) Probable cyclic nucleotide-gated ion | 8e-10 | |
| d1vp6a_ | 133 | b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizo | 2e-09 | |
| d1vp6a_ | 133 | b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizo | 1e-04 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 8e-09 | |
| d2oz6a2 | 134 | b.82.3.2 (A:9-142) Cyclic AMP receptor-like protei | 1e-08 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-08 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-08 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-07 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-07 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-07 | |
| d1o5la1 | 129 | b.82.3.2 (A:1-129) CRP-like transcriptional regula | 6e-07 | |
| d1q3ea_ | 193 | b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus mu | 7e-07 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-06 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-06 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-06 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 3e-06 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-06 | |
| d2zcwa2 | 112 | b.82.3.2 (A:6-117) Transcriptional regulator TTHA1 | 1e-05 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-05 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-05 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-05 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 6e-05 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 7e-05 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-04 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-04 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-04 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-04 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-04 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 7e-04 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 8e-04 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 9e-04 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 0.001 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 0.001 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 0.003 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 0.003 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 0.003 |
| >d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PP2C-like superfamily: PP2C-like family: PP2C-like domain: Protein serine/threonine phosphatase 2C, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (286), Expect = 1e-28
Identities = 59/312 (18%), Positives = 104/312 (33%), Gaps = 56/312 (17%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD-HFFGVFDGHGEFGAQCSQFVKRK 153
LRY S +G+ + +D+ + + FF V+DGH G+Q +++
Sbjct: 21 LRYGLSSMQGWRVE-----MEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEH 73
Query: 154 LCENLLRNNKFH-----------EDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLV 202
L +++ N F ++ + + SG+TAV VL+
Sbjct: 74 LLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLI 133
Query: 203 RGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEG 262
+ Y N GDSR +L R + D P E ER+
Sbjct: 134 SPQHTYFINCGDSRGLLCRNRKV----HFFTQDHKPSNPLEKERI--------------- 174
Query: 263 LKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELT 322
Q G L V + G + + V PE+ E +
Sbjct: 175 ------QNAGGSVMIQRVNGSLAVSRAL--GDFDYKCVHGKGPTEQLVSPEPEVHDIERS 226
Query: 323 NDHP-FFVLASDGVFEFLSSQAVVDMVAKY----KDPRDACAAIVAESYRLWLQYETRTD 377
+ F +LA DG+++ + ++ + D V D C +V D
Sbjct: 227 EEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKG-----SRD 281
Query: 378 DITVIVVHINGL 389
+++VI++
Sbjct: 282 NMSVILICFPNA 293
|
| >d1ne6a1 b.82.3.2 (A:109-244) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Cow (Bos taurus) [TaxId: 9913]
Score = 92.5 bits (229), Expect = 1e-22
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 8 IPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVI 67
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
GE +V E + + SFGELAL+Y P A+V+A TN LW +
Sbjct: 68 DQGEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGID 117
Query: 581 REDFRGILMS 590
R+ +R ILM
Sbjct: 118 RDSYRRILMG 127
|
| >d1ne6a1 b.82.3.2 (A:109-244) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Cow (Bos taurus) [TaxId: 9913]
Score = 48.6 bits (115), Expect = 2e-07
Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 26/129 (20%)
Query: 599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDAD 658
K + L S L + S + D + VSF AG+T++ + Y+I +G++ + + +
Sbjct: 20 KAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE 79
Query: 659 LLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVC 718
++ FGE L+ + T A +V
Sbjct: 80 WATSVGEGG--------------------------SFGELALIYGTPRAATVKAKTNVKL 113
Query: 719 AILTKEKFD 727
+ ++ +
Sbjct: 114 WGIDRDSYR 122
|
| >d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 90.6 bits (224), Expect = 5e-22
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 4 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 63
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
T + + SFGELALMYN P A++ A + G LW L
Sbjct: 64 ------DRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGLD 117
Query: 581 REDFRGILMS 590
R FR I++
Sbjct: 118 RVTFRRIIVK 127
|
| >d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PP2C-like superfamily: PP2C-like family: PP2C-like domain: putative serine/threonine phosphatase pstp/ppp species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 78.0 bits (191), Expect = 1e-16
Identities = 49/297 (16%), Positives = 95/297 (31%), Gaps = 71/297 (23%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKL 154
LRY+ S RG N+DS + DG G G + + +
Sbjct: 3 LRYAARSDRGLVR----ANNEDSVYA--------GARLLALADGMG--GHAAGEVASQLV 48
Query: 155 CENL--LRNNKFHEDAVDACHSSYLTTNSQLHADVL---DDSMSGTTAVTVLVRGRTIYV 209
L L +++ D + ++ NS + A V D GTT +L G + +
Sbjct: 49 IAALAHLDDDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGL 108
Query: 210 ANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQ 269
+ GDSR L + D + QT E +
Sbjct: 109 VHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITP----------------------- 145
Query: 270 CWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFV 329
+ + R++ E P + + E ++
Sbjct: 146 ---------------EEAHSHPQRSLIMRALTGHEVE-------PTLTMREARAGD-RYL 182
Query: 330 LASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHI 386
L SDG+ + +S + +++ + + ++ ++ + R D++TV+V +
Sbjct: 183 LCSDGLSDPVSDETILEALQI-PEVAESAHRLIELALR-----GGGPDNVTVVVADL 233
|
| >d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 147 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 72.1 bits (176), Expect = 2e-15
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Query: 472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQ 531
E + + L S+ ++D + G+ ++ QG D F++V SGE + +
Sbjct: 1 ESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKR 60
Query: 532 EEKNGEVPRVLQRYTAEKL-SSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
+ K+ FGELAL+ NKP AS A+ A+ + F +L
Sbjct: 61 KGKSDIEENGAVEIARCLRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGP 120
|
| >d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 147 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 64.1 bits (155), Expect = 1e-12
Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 17/161 (10%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
+ S+ L L + + + D + ++ G+ I+ + + +I++ G+VRIT
Sbjct: 3 FIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKG 62
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCA 719
S+ G YFGE L+ + +A A+ V C
Sbjct: 63 KSDIEENGAVEIAR---------------CLRGQYFGELALVTNKPRAASAHAIGTVKCL 107
Query: 720 ILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDI 760
+ + F+ ++GP +I +N Y + ++DI
Sbjct: 108 AMDVQAFERLLGPCMEIMK--RNIATYEEQLVALFGTNMDI 146
|
| >d1ne6a2 b.82.3.2 (A:245-376) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Cow (Bos taurus) [TaxId: 9913]
Score = 68.3 bits (166), Expect = 3e-14
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQ 531
E L + L + + D ++ V+ + G +V QG GD F+++ E A
Sbjct: 1 EEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFII----LEGSAAV 56
Query: 532 EEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
++ E ++ FGE+AL+ N+P A+V A L R F +L
Sbjct: 57 LQRRSENEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVL 113
|
| >d1ne6a2 b.82.3.2 (A:245-376) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Cow (Bos taurus) [TaxId: 9913]
Score = 54.4 bits (130), Expect = 2e-09
Identities = 36/149 (24%), Positives = 52/149 (34%), Gaps = 22/149 (14%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
L V +L L + +AD L V F GQ IV E +II G
Sbjct: 3 FLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAA------- 55
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCA 719
++ YFGE LL + T VA + C
Sbjct: 56 -------------VLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGPLKCV 102
Query: 720 ILTKEKFDLVVGPLTKISHDDQNSKDYSS 748
L + +F+ V+GP + I +N + Y+S
Sbjct: 103 KLDRPRFERVLGPCSDILK--RNIQQYNS 129
|
| >d1o7fa2 b.82.3.2 (A:13-167) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 155 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory domain of Epac2, domains 1 and 3 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 66.8 bits (162), Expect = 2e-13
Identities = 21/128 (16%), Positives = 49/128 (38%), Gaps = 4/128 (3%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
++ E+ I L F K + + C ++ G + +QG G +Y V +
Sbjct: 14 RSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLA 73
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
G +V ++ + + + +++ N P A++ + L +++E
Sbjct: 74 GSLDVKVSETSSHQDAVTICTLGIGT----AFGESILDNTPRHATIVTRESSELLRIEQE 129
Query: 583 DFRGILMS 590
DF+ +
Sbjct: 130 DFKALWEK 137
|
| >d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 124 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory domain of Epac2, domains 1 and 3 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.8 bits (157), Expect = 4e-13
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 11/127 (8%)
Query: 464 TWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQ-RVEVQAGDIVVKQGGEGDCFYVVGS 522
T ++ I L L+ + L + + G ++ QG EG +Y++
Sbjct: 1 TVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILK 60
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGM-LWALKR 581
G V+ + + + FG+LAL+ + P AS+ + + +
Sbjct: 61 GSVNVVIYGKGVVCTL---------HEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDK 111
Query: 582 EDFRGIL 588
EDF IL
Sbjct: 112 EDFNRIL 118
|
| >d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 124 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory domain of Epac2, domains 1 and 3 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.0 bits (90), Expect = 4e-04
Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 598 LKLLRSVDLLSRLTILQLSHLADTLS-EVSFSAGQTIVNMNEGVAALYIIQRGQVRITF 655
L + LS L+ LA L E G + N E + YII +G V +
Sbjct: 9 YDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVI 67
|
| >d1i5za2 b.82.3.2 (A:6-137) Catabolite gene activator protein, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Catabolite gene activator protein, N-terminal domain species: Escherichia coli [TaxId: 562]
Score = 62.6 bits (151), Expect = 3e-12
Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 12/136 (8%)
Query: 485 TDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQR 544
TD L + + ++ QG + + Y + G V+ EE + L +
Sbjct: 2 TDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQ 61
Query: 545 YTAEKLSSFGELALMYNKPL-QASVRAVTNGMLWALKREDFRGI------LMSEFSNLSS 597
GEL L A VRA T + + + FR + ++ S +
Sbjct: 62 G-----DFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMA 116
Query: 598 LKLLRSVDLLSRLTIL 613
+L + + + L L
Sbjct: 117 RRLQVTSEKVGNLAFL 132
|
| >d1i5za2 b.82.3.2 (A:6-137) Catabolite gene activator protein, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Catabolite gene activator protein, N-terminal domain species: Escherichia coli [TaxId: 562]
Score = 39.1 bits (90), Expect = 5e-04
Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 22/115 (19%)
Query: 614 QLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLH 673
L + + T+++ E LY I +G V + + + L
Sbjct: 5 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLN---- 60
Query: 674 VEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMG-SLTAVAVDDVVCAILTKEKFD 727
+G + GE L E S A A ++ +KF
Sbjct: 61 -----------------QGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFR 98
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 61.4 bits (148), Expect = 2e-10
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 734 TKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDS 793
K + ++ K++ + + K + S L + K L + + LV ++S
Sbjct: 6 AKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES 65
Query: 794 ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853
N ++K KQKV L + L EK ++++V+ + ++ + D+ + +++
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
+ S L E ARF AA +V E LH ++YR + P+ L++D+ G++Q
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.4 bits (146), Expect = 2e-10
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
+ +L D E + L + L + S+ L+LK K +++ G E Q+ +E +
Sbjct: 2 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 61
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALE 882
+ + ++ D+ L+L + L + DEQ + AL
Sbjct: 62 HLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 120
Query: 883 DLHKRGVLYRGVSPDVLMLDKSGHL 907
H + V++R + P+ L+L +G L
Sbjct: 121 YCHSKRVIHRDIKPENLLLGSAGEL 145
|
| >d2gaua2 b.82.3.2 (A:10-151) Transcriptional regulator PG0396, N-terminal domain {Porphyromonas gingivalis [TaxId: 837]} Length = 142 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Transcriptional regulator PG0396, N-terminal domain species: Porphyromonas gingivalis [TaxId: 837]
Score = 57.1 bits (137), Expect = 2e-10
Identities = 18/135 (13%), Positives = 48/135 (35%), Gaps = 9/135 (6%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
++ L + + +L +Q + V +G + + + G+ +++ +
Sbjct: 8 VWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHIS 67
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLK 599
R+++ FG + ++ AV N + A+ E L+ ++
Sbjct: 68 RIVKPGQ-----FFGMRPYFAEETCSSTAIAVENSKVLAIPVEAIEA-LLKGNTSF-CRY 120
Query: 600 LLRSVDLLSRLTILQ 614
L++ L L +
Sbjct: 121 FLKA--LAKELGYAE 133
|
| >d2gaua2 b.82.3.2 (A:10-151) Transcriptional regulator PG0396, N-terminal domain {Porphyromonas gingivalis [TaxId: 837]} Length = 142 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Transcriptional regulator PG0396, N-terminal domain species: Porphyromonas gingivalis [TaxId: 837]
Score = 39.0 bits (90), Expect = 5e-04
Identities = 21/128 (16%), Positives = 39/128 (30%), Gaps = 23/128 (17%)
Query: 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADL 659
LLR D+ S L + L + T+ + + L+ + G+++I +
Sbjct: 4 LLR--DVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVY 61
Query: 660 LSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCA 719
G +FG E S TA+AV++
Sbjct: 62 GRFHISR---------------------IVKPGQFFGMRPYFAEETCSSTAIAVENSKVL 100
Query: 720 ILTKEKFD 727
+ E +
Sbjct: 101 AIPVEAIE 108
|
| >d1wgpa_ b.82.3.2 (A:) Probable cyclic nucleotide-gated ion channel 6 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 137 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Probable cyclic nucleotide-gated ion channel 6 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 55.7 bits (133), Expect = 8e-10
Identities = 17/127 (13%), Positives = 45/127 (35%), Gaps = 13/127 (10%)
Query: 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMAT 530
+ LF + + + + ++ +V++G + + G E + T
Sbjct: 4 GSSGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTT 63
Query: 531 QEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQA---------SVRAVTNGMLWALKR 581
++G R L + G+ L + ++ +V+A+T +AL
Sbjct: 64 DGGRSGFYNRSLLKEG----DFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIA 119
Query: 582 EDFRGIL 588
++ + +
Sbjct: 120 DELKFVA 126
|
| >d1vp6a_ b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizobium loti [TaxId: 381]} Length = 133 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Putative ion channel CnbD species: Mesorhizobium loti [TaxId: 381]
Score = 54.4 bits (130), Expect = 2e-09
Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 12/111 (10%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 18 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELGPGA 77
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
+ + +P A+V A T L +L DF+ + S
Sbjct: 78 FFGEMAL------------ISGEPRSATVSAATTVSLLSLHSADFQMLCSS 116
|
| >d1vp6a_ b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizobium loti [TaxId: 381]} Length = 133 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Putative ion channel CnbD species: Mesorhizobium loti [TaxId: 381]
Score = 40.5 bits (94), Expect = 1e-04
Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 38/149 (25%)
Query: 579 LKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNE 638
++R DF + + +L+ +V L +L L + L + AG I + E
Sbjct: 1 VRRGDF----------VRNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGE 50
Query: 639 GVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEW 698
++ + G V + VE G++FGE
Sbjct: 51 PGDRMFFVVEGSVSVA----------------------------TPNPVELGPGAFFGEM 82
Query: 699 TLLGEHMGSLTAVAVDDVVCAILTKEKFD 727
L+ S T A V L F
Sbjct: 83 ALISGEPRSATVSAATTVSLLSLHSADFQ 111
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 56.3 bits (135), Expect = 8e-09
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC--VPQILCTCADSMH 844
D+ ++K K+++K E L E+ ++ VS C + +
Sbjct: 22 GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 81
Query: 845 AGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L L H E RF AA ++ LE +H R V+YR + P ++LD
Sbjct: 82 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD 141
Query: 903 KSGHLQ 908
+ GH++
Sbjct: 142 EHGHVR 147
|
| >d2oz6a2 b.82.3.2 (A:9-142) Cyclic AMP receptor-like protein Vfr {Pseudomonas aeruginosa [TaxId: 287]} Length = 134 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Cyclic AMP receptor-like protein Vfr species: Pseudomonas aeruginosa [TaxId: 287]
Score = 52.5 bits (125), Expect = 1e-08
Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 11/132 (8%)
Query: 492 LLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLS 551
LL R A ++ G + + + G ++ + R +
Sbjct: 8 LLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTIL-----IEDDDGREMIIGYLNSGD 62
Query: 552 SFGELALM----YNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLL 607
FGEL L + A VRA + + FR L + S + L +
Sbjct: 63 FFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFR-ELSQQDSEI-LYTLGSQMADR 120
Query: 608 SRLTILQLSHLA 619
R T ++ LA
Sbjct: 121 LRKTTRKVGDLA 132
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (131), Expect = 2e-08
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
KV++ D ++ K L ++ LV + + + ++K K+ + + + E +++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALE 882
+ + + ++ L L E+ ARF A +V+ALE
Sbjct: 61 NTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 883 DLHKRGVLYRGVSPDVLMLDKSGHL 907
LH R V+YR + + LMLDK GH+
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHI 144
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 53.5 bits (128), Expect = 3e-08
Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 8/129 (6%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEV------QVLKEKNLMKSVSPSACVPQILCTCA 840
+ + + ++K E LKE ++++ VS + Q+ T
Sbjct: 21 RCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 80
Query: 841 DSMHAGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
+ L+ + L L L E+ R +++ + LHK +++R + P+
Sbjct: 81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN 140
Query: 899 LMLDKSGHL 907
++LD ++
Sbjct: 141 ILLDDDMNI 149
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (124), Expect = 1e-07
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
L + ++K K+ + K V +E+++M + ++ T D
Sbjct: 26 LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLY 84
Query: 847 LLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904
L+ L + DE RF A +V+ALE LH +G+++R + P+ ++L++
Sbjct: 85 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 144
Query: 905 GHL 907
H+
Sbjct: 145 MHI 147
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.9 bits (121), Expect = 3e-07
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV 826
SL D + + L + + L+ R + + ++K K+ V L + E+ ++ V
Sbjct: 2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 61
Query: 827 SPSACVPQILCTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDL 884
+ + ++ T D+ ++++ L S+L A+F AA V ALE L
Sbjct: 62 T-HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL 120
Query: 885 HKRGVLYRGVSPDVLMLDKSGHL 907
H + ++YR + P+ ++LDK+GH+
Sbjct: 121 HSKDIIYRDLKPENILLDKNGHI 143
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (120), Expect = 4e-07
Identities = 15/124 (12%), Positives = 44/124 (35%), Gaps = 7/124 (5%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
+++ + K + + L + E +++ S + ++L +
Sbjct: 30 KAQNKETSVLAAAKVIDTKSEEELE---DYMVEIDILASCD-HPNIVKLLDAFYYENNLW 85
Query: 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903
+L+ + +++ PL E + + AL LH +++R + ++
Sbjct: 86 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 145
Query: 904 SGHL 907
G +
Sbjct: 146 DGDI 149
|
| >d1o5la1 b.82.3.2 (A:1-129) CRP-like transcriptional regulator TM1171, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: CRP-like transcriptional regulator TM1171, N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 47.3 bits (111), Expect = 6e-07
Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 12/127 (9%)
Query: 492 LLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLS 551
LL C + + + G+IV Q + ++ G + E ++
Sbjct: 6 LLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQ----- 60
Query: 552 SFGELALMYNKPLQ-ASVRAVTNGMLWALKREDFRGILMS------EFSNLSSLKLLRSV 604
+ ++P +V A N + ++ +E F +LM F S
Sbjct: 61 IIASGFIFSSEPRFPVNVVAGENSKILSIPKEVFLDLLMKDRELLLFFLKDVSEHFRVVS 120
Query: 605 DLLSRLT 611
+ L LT
Sbjct: 121 EKLFFLT 127
|
| >d1q3ea_ b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus musculus) [TaxId: 10090]} Length = 193 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: HCN pacemaker channel species: Mouse (Mus musculus) [TaxId: 10090]
Score = 48.5 bits (114), Expect = 7e-07
Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 14/161 (8%)
Query: 430 QRIRHDLSRARLRAIENSLENGQIWVPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQC 489
Q+I R + I + R+ + + LF +
Sbjct: 29 QKIHDYY---EHRYQGKMFDEDSILGELNGPLREEIVNFNC-RKLVASMPLFANADPNFV 84
Query: 490 HVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEK 549
+L ++ Q GD ++++G G Y + G V+ +
Sbjct: 85 TAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGN----------KEMKLSD 134
Query: 550 LSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMS 590
S FGE+ L+ ASVRA T L++L ++F +L
Sbjct: 135 GSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEE 175
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.8 bits (116), Expect = 1e-06
Identities = 19/123 (15%), Positives = 41/123 (33%), Gaps = 3/123 (2%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
+ +++K+ S + K ++KE ++ + Q A
Sbjct: 33 FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAW 91
Query: 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904
L++ L + PL E + L LH +++R V ++L +
Sbjct: 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 151
Query: 905 GHL 907
G +
Sbjct: 152 GLV 154
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (114), Expect = 2e-06
Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
+ + +++K+ + L + + +E L+K + V +L
Sbjct: 36 SAVDGRTGAKVAIKKLYRPFQSELFAK-RAYRELRLLKHMR-HENVIGLLDVFTPDETLD 93
Query: 847 LLLNTYLACPLASIL------HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900
+ YL P H L E +F ++ L +H G+++R + P L
Sbjct: 94 DFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA 153
Query: 901 LDKSGH 906
+++
Sbjct: 154 VNEDCE 159
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (113), Expect = 2e-06
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
L + R +E +++K ++ + KE + K ++ V + +
Sbjct: 23 LAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVV-KFYGHRREGNIQY 79
Query: 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904
L L L + + E A+ ++A + LH G+ +R + P+ L+LD+
Sbjct: 80 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 139
Query: 905 GHL 907
+L
Sbjct: 140 DNL 142
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.1 bits (114), Expect = 3e-06
Identities = 19/123 (15%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
+ + +++++ + Q+ K+ ++ E +M+ + + L +
Sbjct: 38 TAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENK-NPNIVNYLDSYLVGDELW 93
Query: 847 LLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
+++ L ++ T +DE + ALE LH V++R + D ++L G
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 153
Query: 906 HLQ 908
++
Sbjct: 154 SVK 156
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 48.3 bits (114), Expect = 3e-06
Identities = 19/121 (15%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
+ + + +K K K ++ +E +++++ + + D +
Sbjct: 53 EAINITNNEKVVVKILKPVKKK------KIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 847 L-LLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
L+ ++ L+ L + RF ++ AL+ H G+++R V P +M+D
Sbjct: 107 PALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 166
Query: 906 H 906
Sbjct: 167 R 167
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.1 bits (106), Expect = 2e-05
Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 12/110 (10%)
Query: 807 VKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA---CP---LASI 860
+K L + +E L S + +I+ + L + L S
Sbjct: 42 LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL--LIVMECLDGGELFSR 99
Query: 861 LHT----PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
+ E+ A S+ A++ LH + +R V P+ L+
Sbjct: 100 IQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 149
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 44.7 bits (105), Expect = 3e-05
Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 9/127 (7%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
V R + N + K + V KE M + + + D
Sbjct: 44 RVTERATGNNFAAKFVMTPHES---DKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMV 99
Query: 847 LLLNTYLACPLASIL---HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML-- 901
++ L + H + E A V L +H+ ++ + P+ +M
Sbjct: 100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 159
Query: 902 DKSGHLQ 908
+S L+
Sbjct: 160 KRSNELK 166
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.7 bits (105), Expect = 3e-05
Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 6/124 (4%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
V + S ++ K + Q+++E ++ + S +
Sbjct: 24 KVSHKPSGLVMARKLIHLEIKP--AIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEIS 80
Query: 847 LLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDK 903
+ + L +L + EQ + +V+ L L K +++R V P ++++
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
Query: 904 SGHL 907
G +
Sbjct: 141 RGEI 144
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.7 bits (102), Expect = 6e-05
Identities = 17/105 (16%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 806 KVKCLGKEV-QVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHT- 863
K++C+ + Q+ E + K + +P I A+ + +++ L L + +
Sbjct: 38 KLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY-NVMVMELLGPSLEDLFNFC 96
Query: 864 --PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906
++ A +++ +E +H + ++R V PD ++
Sbjct: 97 SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK 141
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (102), Expect = 7e-05
Identities = 17/114 (14%), Positives = 43/114 (37%), Gaps = 11/114 (9%)
Query: 797 LSLKRFSKQKVKCLGKEVQVLKE---KNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853
L++ + Q+++ EV VL++ N++ + L L + +L
Sbjct: 38 LNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTAPQLAIVTQWCEGSSLYH-HL 94
Query: 854 ACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
I+ T + A ++ LH + +++R + + + L + +
Sbjct: 95 -----HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV 143
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 43.1 bits (101), Expect = 1e-04
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 7/123 (5%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
+ + + K + + V E ++M + + + D
Sbjct: 47 RCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMV 102
Query: 847 LLLNTYLACPLASILHT---PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903
L+L L + + E L+ +H+ +++ + P+ +M +
Sbjct: 103 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET 162
Query: 904 SGH 906
Sbjct: 163 KKA 165
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (100), Expect = 1e-04
Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 807 VKCLGKEV---QVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLAC-PLASILH 862
VKC+ + L E ++M + + + Q+L + ++ Y+A L L
Sbjct: 35 VKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR 93
Query: 863 ----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
+ L + V A+E L ++R ++ +++ +
Sbjct: 94 SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA 142
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 42.4 bits (99), Expect = 2e-04
Identities = 17/125 (13%), Positives = 47/125 (37%), Gaps = 9/125 (7%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
+ + +++K + ++ + LKE +MK + + Q+L C
Sbjct: 35 EGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFY 89
Query: 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
++ L L + + A + +A+E L K+ ++R ++ ++
Sbjct: 90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 149
Query: 903 KSGHL 907
++ +
Sbjct: 150 ENHLV 154
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (98), Expect = 2e-04
Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 5/125 (4%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEV--QVLKEKNLMKSVSPSACVPQILCTCADSMH 844
+++ +++K+ + L+E L++ +S + +L +
Sbjct: 16 KARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSN 74
Query: 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
L+ + I L + + LE LH+ +L+R + P+ L+LD
Sbjct: 75 ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD 134
Query: 903 KSGHL 907
++G L
Sbjct: 135 ENGVL 139
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (96), Expect = 3e-04
Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 8/113 (7%)
Query: 799 LKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLA 858
+K + + E + ++E +M ++S + Q+ C ++ L
Sbjct: 33 IKMIKEGSMS----EDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLL 87
Query: 859 SILHT---PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908
+ L Q V A+E L + L+R ++ +++ G ++
Sbjct: 88 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 140
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.1 bits (93), Expect = 7e-04
Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Query: 799 LKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLA 858
+K + ++E N M S+ + ++ ++ PL
Sbjct: 41 VKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLTPPM--KMVTEL--APLG 95
Query: 859 SILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
S+L + A V + L + ++R ++ L+L +
Sbjct: 96 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLV 150
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (93), Expect = 8e-04
Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 15/134 (11%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
+ + L K + K+ ++ E NL++ + + + D +
Sbjct: 22 KIRRKSDGKILVWKELDYGSMTEAEKQ-MLVSEVNLLRELK-HPNIVRYYDRIIDRTNTT 79
Query: 847 LLLNT-YLAC-PLASILH------TPLDEQSARFCAASVVAALEDLHKRG-----VLYRG 893
L + Y LAS++ LDE+ + AL++ H+R VL+R
Sbjct: 80 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 139
Query: 894 VSPDVLMLDKSGHL 907
+ P + LD ++
Sbjct: 140 LKPANVFLDGKQNV 153
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (92), Expect = 9e-04
Identities = 21/128 (16%), Positives = 53/128 (41%), Gaps = 13/128 (10%)
Query: 790 LRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQIL-----CTCADSMH 844
L++ F++LKR Q + G + ++E +++ + + P ++ CT + +
Sbjct: 29 LKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLE-TFEHPNVVRLFDVCTVSRTDR 86
Query: 845 AGLLLNTYLACP------LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
L + L + + ++ + ++ L+ LH V++R + P
Sbjct: 87 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 146
Query: 899 LMLDKSGH 906
+++ SG
Sbjct: 147 ILVTSSGQ 154
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (93), Expect = 0.001
Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 19/131 (14%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
L DS +++K+ + K + +E+Q++++ + + ++ S
Sbjct: 38 QAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLD-------HCNIVRLRYFFYSSGEKK 89
Query: 847 LLLNTYLA------CPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVS 895
+ L H L + + +L +H G+ +R +
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 896 PDVLMLDKSGH 906
P L+LD
Sbjct: 150 PQNLLLDPDTA 160
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (91), Expect = 0.001
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 22/128 (17%)
Query: 799 LKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS---------MHAGLLL 849
+K L + ++ E ++ + + +L C G LL
Sbjct: 58 VKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 850 N-----------TYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898
N + + + LD + + V + L + ++R ++
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175
Query: 899 LMLDKSGH 906
++L
Sbjct: 176 ILLTHGRI 183
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (89), Expect = 0.003
Identities = 15/135 (11%), Positives = 40/135 (29%), Gaps = 27/135 (20%)
Query: 799 LKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLA 858
+K ++ + ++ E +M + + +L C S L+ L
Sbjct: 72 VKMLKEKADS--SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 129
Query: 859 SILHT-------------------------PLDEQSARFCAASVVAALEDLHKRGVLYRG 893
+ L + L + A V +E L + ++R
Sbjct: 130 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD 189
Query: 894 VSPDVLMLDKSGHLQ 908
++ +++ ++
Sbjct: 190 LAARNVLVTHGKVVK 204
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (88), Expect = 0.003
Identities = 13/111 (11%), Positives = 36/111 (32%), Gaps = 11/111 (9%)
Query: 800 KRFSKQKVKCLGKEVQVLKE---KNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856
S + +E +++ +++K + + + G L +
Sbjct: 45 NCTSDSVREKFLQEALTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR- 101
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
LD S A + AL L + ++R ++ +++ + +
Sbjct: 102 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV 147
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (89), Expect = 0.003
Identities = 15/125 (12%), Positives = 39/125 (31%), Gaps = 8/125 (6%)
Query: 787 LVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846
+ S+ K + +V V KE +++ + + +
Sbjct: 23 RCVETSSKKTYMAKFVKVKGTD----QVLVKKEISILNIAR-HRNILHLHESFESMEELV 77
Query: 847 LLLNTYLACPLASILHT---PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903
++ + ++T L+E+ V AL+ LH + + + P+ ++
Sbjct: 78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT 137
Query: 904 SGHLQ 908
Sbjct: 138 RRSST 142
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 908 | |||
| d1a6qa2 | 295 | Protein serine/threonine phosphatase 2C, catalytic | 100.0 | |
| d1txoa_ | 235 | putative serine/threonine phosphatase pstp/ppp {My | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.98 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.97 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.97 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.97 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.97 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 99.97 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.97 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.97 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.97 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.97 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.97 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.97 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.97 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.96 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.96 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.96 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.96 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.96 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.96 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.95 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.95 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.95 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.95 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.95 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.95 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.95 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.95 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.95 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.95 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.95 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.95 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.95 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.95 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.94 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.94 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.94 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.94 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.94 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.94 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.94 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.94 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.94 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.94 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.94 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.94 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.94 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.94 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.94 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.93 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.93 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.93 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.93 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.93 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.92 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.92 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.92 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.91 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.9 | |
| d1cx4a1 | 136 | Regulatory subunit of Protein kinase A {Rat (Rattu | 99.9 | |
| d1ne6a1 | 136 | Regulatory subunit of Protein kinase A {Cow (Bos t | 99.87 | |
| d1o7fa2 | 155 | Regulatory domain of Epac2, domains 1 and 3 {Mouse | 99.85 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.84 | |
| d1cx4a2 | 147 | Regulatory subunit of Protein kinase A {Rat (Rattu | 99.83 | |
| d1ne6a2 | 132 | Regulatory subunit of Protein kinase A {Cow (Bos t | 99.82 | |
| d1o7fa3 | 124 | Regulatory domain of Epac2, domains 1 and 3 {Mouse | 99.82 | |
| d1zyba2 | 147 | Probable transcription regulator BT4300, N-termina | 99.79 | |
| d1cx4a2 | 147 | Regulatory subunit of Protein kinase A {Rat (Rattu | 99.78 | |
| d1ne6a2 | 132 | Regulatory subunit of Protein kinase A {Cow (Bos t | 99.78 | |
| d1q3ea_ | 193 | HCN pacemaker channel {Mouse (Mus musculus) [TaxId | 99.78 | |
| d1o7fa2 | 155 | Regulatory domain of Epac2, domains 1 and 3 {Mouse | 99.77 | |
| d1vp6a_ | 133 | Putative ion channel CnbD {Mesorhizobium loti [Tax | 99.76 | |
| d1wgpa_ | 137 | Probable cyclic nucleotide-gated ion channel 6 {Th | 99.76 | |
| d1ne6a1 | 136 | Regulatory subunit of Protein kinase A {Cow (Bos t | 99.75 | |
| d1cx4a1 | 136 | Regulatory subunit of Protein kinase A {Rat (Rattu | 99.75 | |
| d2gaua2 | 142 | Transcriptional regulator PG0396, N-terminal domai | 99.74 | |
| d1o7fa3 | 124 | Regulatory domain of Epac2, domains 1 and 3 {Mouse | 99.73 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.73 | |
| d1wgpa_ | 137 | Probable cyclic nucleotide-gated ion channel 6 {Th | 99.72 | |
| d1q3ea_ | 193 | HCN pacemaker channel {Mouse (Mus musculus) [TaxId | 99.7 | |
| d1i5za2 | 132 | Catabolite gene activator protein, N-terminal doma | 99.67 | |
| d1vp6a_ | 133 | Putative ion channel CnbD {Mesorhizobium loti [Tax | 99.67 | |
| d2oz6a2 | 134 | Cyclic AMP receptor-like protein Vfr {Pseudomonas | 99.66 | |
| d1zyba2 | 147 | Probable transcription regulator BT4300, N-termina | 99.66 | |
| d3e5ua2 | 139 | Chlorophenol reduction protein CprK {Desulfitobact | 99.63 | |
| d1o5la1 | 129 | CRP-like transcriptional regulator TM1171, N-termi | 99.61 | |
| d2gaua2 | 142 | Transcriptional regulator PG0396, N-terminal domai | 99.61 | |
| d1ft9a2 | 132 | CO-sensing protein CooA, N-terminal domain {Rhodos | 99.56 | |
| d1i5za2 | 132 | Catabolite gene activator protein, N-terminal doma | 99.52 | |
| d2oz6a2 | 134 | Cyclic AMP receptor-like protein Vfr {Pseudomonas | 99.51 | |
| d2zcwa2 | 112 | Transcriptional regulator TTHA1359, N-terminal dom | 99.49 | |
| d2zcwa2 | 112 | Transcriptional regulator TTHA1359, N-terminal dom | 99.42 | |
| d1o5la1 | 129 | CRP-like transcriptional regulator TM1171, N-termi | 99.42 | |
| d1ft9a2 | 132 | CO-sensing protein CooA, N-terminal domain {Rhodos | 99.38 | |
| d3e5ua2 | 139 | Chlorophenol reduction protein CprK {Desulfitobact | 99.34 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.94 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.37 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.43 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 81.16 |
| >d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PP2C-like superfamily: PP2C-like family: PP2C-like domain: Protein serine/threonine phosphatase 2C, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=367.78 Aligned_cols=256 Identities=25% Similarity=0.408 Sum_probs=215.1
Q ss_pred EECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCC-CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC---
Q ss_conf 20899028999982466788999988852399855888-98983899993199937179999999999999981288---
Q 002560 88 VPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFG-TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNK--- 163 (908)
Q Consensus 88 ~~~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~-~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~--- 163 (908)
....+..++||++|.+| .|..|||++.+..++. ..+++.||||||||| |+.||++++++++..+.+...
T Consensus 14 ~~~~~~~~~~g~~s~~G-----~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~ 86 (295)
T d1a6qa2 14 AQGQGNGLRYGLSSMQG-----WRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKG 86 (295)
T ss_dssp EEEEETTEEEEEEEEEE-----TSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHC
T ss_pred CCCCCCCEEEEEEECCC-----CCCCCCCEEEEECCCCCCCCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 42568956899983721-----88744370499705688987607999995999--818999999999999997554213
Q ss_pred -----CCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCEEEEEEEECCEEEEEEECCCEEEEEEECCCEEEEEECCCC
Q ss_conf -----50359999999999997998742---3897888640899999799799999046629999871984699967898
Q 002560 164 -----FHEDAVDACHSSYLTTNSQLHAD---VLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSID 235 (908)
Q Consensus 164 -----~~~~~~~~l~~~~~~~~~~i~~~---~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~lt~d 235 (908)
...++.++++++|..+++.+... ......||||++++++.++++|+|||||||+|+++++. +.+||.|
T Consensus 87 ~~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~----~~~lT~d 162 (295)
T d1a6qa2 87 SAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRK----VHFFTQD 162 (295)
T ss_dssp SSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTE----EEEECCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEECCC----CEEECCC
T ss_conf 456515899999999999999988766554045767799759999942889999955787699860344----0110145
Q ss_pred CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC--------
Q ss_conf 999995599999982987963021236879886567887789999990101599757643222358433346--------
Q 002560 236 QTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAET-------- 307 (908)
Q Consensus 236 h~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~~tra~Gd~~~~~-------- 307 (908)
|+|.++.|++||...||.+... ..+| .+++||+|||..+|.
T Consensus 163 H~~~~~~E~~Ri~~~gg~v~~~----------------------------r~~g---~l~~tRa~Gd~~~k~~~~~~~~~ 211 (295)
T d1a6qa2 163 HKPSNPLEKERIQNAGGSVMIQ----------------------------RVNG---SLAVSRALGDFDYKCVHGKGPTE 211 (295)
T ss_dssp CCTTSHHHHHHHHHTTCCEETT----------------------------EETT---TBSCSBCEECGGGSCCTTCCGGG
T ss_pred CCCCCHHHHHHHHHCCCCCCCC----------------------------CCCC---CEEEEECCCCHHHHHCCCCCCCC
T ss_conf 6753187875676447741024----------------------------4388---42011316767764035567543
Q ss_pred CCCCCCCEEEEEEECC-CCCEEEEECCCCCCCCCHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 8910553199999079-977999975763113586889999851----69989999999999999998209997985999
Q 002560 308 IGVVANPEIVVWELTN-DHPFFVLASDGVFEFLSSQAVVDMVAK----YKDPRDACAAIVAESYRLWLQYETRTDDITVI 382 (908)
Q Consensus 308 ~~v~~~Pdv~~~~l~~-~d~flil~SDGl~d~l~~~ei~~~v~~----~~~~~~~a~~Lv~~a~~~~~~~~~~~DNiTvi 382 (908)
++++++||+..+++.. +|.|||||||||||+|+++++++++.. ..+++.+|+.|++.|+.+ ++.||||||
T Consensus 212 ~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-----gs~DNiTvi 286 (295)
T d1a6qa2 212 QLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK-----GSRDNMSVI 286 (295)
T ss_dssp SSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-----TCCSCEEEE
T ss_pred CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-----CCCCCEEEE
T ss_conf 332444540488850140036766457543468999999999998646898999999999999864-----998886999
Q ss_pred EEECCCCC
Q ss_conf 99929988
Q 002560 383 VVHINGLK 390 (908)
Q Consensus 383 vv~~~~~~ 390 (908)
||+|++.|
T Consensus 287 vv~~~~~~ 294 (295)
T d1a6qa2 287 LICFPNAP 294 (295)
T ss_dssp EEECTTSC
T ss_pred EEECCCCC
T ss_conf 99636889
|
| >d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PP2C-like superfamily: PP2C-like family: PP2C-like domain: putative serine/threonine phosphatase pstp/ppp species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=300.89 Aligned_cols=229 Identities=21% Similarity=0.312 Sum_probs=179.5
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC--CCCCHHHHHH
Q ss_conf 28999982466788999988852399855888989838999931999371799999999999999812--8850359999
Q 002560 94 ELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN--NKFHEDAVDA 171 (908)
Q Consensus 94 ~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~--~~~~~~~~~~ 171 (908)
.++|++.|++|. .|+.|||++++.. .+|+||||||| ..++++|++.+...+.+. .....++...
T Consensus 2 ~~~~~~~s~~G~----~R~~nEDa~~~~~--------~l~~V~DG~GG--~~~g~~as~~~~~~l~~~~~~~~~~~~~~~ 67 (235)
T d1txoa_ 2 VLRYAARSDRGL----VRANNEDSVYAGA--------RLLALADGMGG--HAAGEVASQLVIAALAHLDDDEPGGDLLAK 67 (235)
T ss_dssp EEEEEEEEECCS----SCSSCCEEEEECS--------SEEEEEEEECT--TTHHHHHHHHHHHHHGGGGSSCCCSCHHHH
T ss_pred EEEEEEECCCCC----CCCCCCCCCCCCC--------CEEEEEECCCC--CHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 799998778899----9898879501499--------88999858998--478999999999999998631675208999
Q ss_pred HHHHHHHHHHHHHHC---CCCCCCCCCEEEEEEEECCEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 999999997998742---38978886408999997997999990466299998719846999678989999955999999
Q 002560 172 CHSSYLTTNSQLHAD---VLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVK 248 (908)
Q Consensus 172 l~~~~~~~~~~i~~~---~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~lt~dh~~~~~~E~~Ri~ 248 (908)
+++++..+|..+... ......+|||++++++.+++++++||||||+|++|++. ..+||.||++. .++.
T Consensus 68 l~~~~~~~~~~l~~~~~~~~~~~~~gtt~~~~~~~~~~l~~anvGDSr~~l~r~g~----~~~lt~dH~~~-----~~~~ 138 (235)
T d1txoa_ 68 LDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGE----LTQITKDDTFV-----QTLV 138 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTE----EEECSCCCBHH-----HHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEEEECCCCCEEEECCCE----EEEECCCCCHH-----HHHH
T ss_conf 99999999999998740155666640356666630441578750776279961878----99944887588-----8766
Q ss_pred HCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE
Q ss_conf 82987963021236879886567887789999990101599757643222358433346891055319999907997799
Q 002560 249 LSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFF 328 (908)
Q Consensus 249 ~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~~tra~Gd~~~~~~~v~~~Pdv~~~~l~~~d~fl 328 (908)
..|.. .......+|.+ +.+||++|+ ...+|++..++++++|. +
T Consensus 139 ~~g~~-------------------~~~~~~~~~~~----------~~lt~~~g~-------~~~~pdi~~~~l~~~D~-l 181 (235)
T d1txoa_ 139 DEGRI-------------------TPEEAHSHPQR----------SLIMRALTG-------HEVEPTLTMREARAGDR-Y 181 (235)
T ss_dssp HTTSS-------------------CTTGGGGCTTT----------TCBCCCBSS-------SCCCCEEEEEECCTTCE-E
T ss_pred HHCCC-------------------CHHHHHHCCCC----------CHHHCCCCC-------CCCCCEEEEEECCCCCE-E
T ss_conf 51663-------------------25665516554----------411101344-------34444178886378988-9
Q ss_pred EEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 997576311358688999985169989999999999999998209997985999999299
Q 002560 329 VLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHING 388 (908)
Q Consensus 329 il~SDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~a~~~~~~~~~~~DNiTvivv~~~~ 388 (908)
|||||||||+++++++.+++.. .+++++|+.|++.|+++ |+.||||||||++++
T Consensus 182 lL~SDGl~d~l~~~ei~~i~~~-~~~~~~a~~Lv~~A~~~-----gs~DNiTvivv~l~~ 235 (235)
T d1txoa_ 182 LLCSDGLSDPVSDETILEALQI-PEVAESAHRLIELALRG-----GGPDNVTVVVADLEH 235 (235)
T ss_dssp EEECHHHHTTSCHHHHHHHHTS-SSHHHHHHHHHHHHHHT-----TCCSCEEEEEEEEEC
T ss_pred EECCCCHHCCCCHHHHHHHHHC-CCHHHHHHHHHHHHHHC-----CCCCCEEEEEEEEEC
T ss_conf 9827214137899999999857-99999999999999864-----997878999999769
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-33 Score=216.98 Aligned_cols=143 Identities=24% Similarity=0.370 Sum_probs=135.2
Q ss_pred CCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCE
Q ss_conf 42224529998745788179999998799754999620123430100688999999999752999861223345203880
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
+++++||++++.||+|+||.||+|+++.+++.||+|++.+.........+++.+|..+|+.+. ||+|++++.++.+...
T Consensus 1 ~i~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~ 79 (337)
T d1o6la_ 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDR 79 (337)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSE
T ss_pred CCCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCC-CCCEEEEEEEECCCCC
T ss_conf 984474289889831768499999998999899999981565449799999999999998679-9988778764035642
Q ss_pred EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 999972478896888970--8999999999999999999999967967358999918986899209
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+|++|||+++|+|..++. +.+++..++.|++|++.||+|||++||+||||||+|||++.+|++|
T Consensus 80 ~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vk 145 (337)
T d1o6la_ 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145 (337)
T ss_dssp EEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred CCCCEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEE
T ss_conf 111000357986055553256775999999999996521134315962246477784765899888
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=3.4e-31 Score=207.21 Aligned_cols=143 Identities=22% Similarity=0.269 Sum_probs=133.9
Q ss_pred CCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCE
Q ss_conf 42224529998745788179999998799754999620123430100688999999999752999861223345203880
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.-++++|++.+.||+|+||.||+|+++.+++.||+|++.+....+......+.+|..+++.+ +||||+++++++.+...
T Consensus 2 ~~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~ 80 (263)
T d2j4za1 2 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATR 80 (263)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred CCCHHHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC-CCCCCCEEEEEEEECCE
T ss_conf 76153769988985177858999999899949999998168856768999999999999856-88888859999998999
Q ss_pred EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 999972478896888970--8999999999999999999999967967358999918986899209
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+|++|||+++|+|..++. +++++..++.++.|++.||.|||+++|+||||||+|||++.+|.+|
T Consensus 81 ~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~k 146 (263)
T d2j4za1 81 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELK 146 (263)
T ss_dssp EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCEE
T ss_conf 899985047985898875048999999999999999999999988946522023441466899871
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.7e-31 Score=207.01 Aligned_cols=143 Identities=23% Similarity=0.309 Sum_probs=133.2
Q ss_pred CCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCE
Q ss_conf 42224529998745788179999998799754999620123430100688999999999752999861223345203880
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
....++|++++.||+|+||.||+|.++.+++.||+|++.+.........+.+.+|..+++.++ ||||+++++++.+...
T Consensus 4 ~~~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~ 82 (288)
T d1uu3a_ 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEK 82 (288)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-STTBCCEEEEEECSSE
T ss_pred CCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCC-CCCEEEEEEEEEECCE
T ss_conf 989987789889850879099999998999799999986577557778999999999998768-8886179999998998
Q ss_pred EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 999972478896888970--8999999999999999999999967967358999918986899209
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+|++|||+++|+|.+++. +.+++..++.++.|++.||.|||+++|+||||||+|||++.+|++|
T Consensus 83 ~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vk 148 (288)
T d1uu3a_ 83 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQ 148 (288)
T ss_dssp EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEE
T ss_pred EEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEE
T ss_conf 899997048987777653159999999999999999999762165088476774123668885388
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=5e-31 Score=206.20 Aligned_cols=141 Identities=25% Similarity=0.398 Sum_probs=132.7
Q ss_pred CCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
Q ss_conf 22452999874578817999999879975499962012343010068899999999975299986122334520388099
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~ 846 (908)
+++||++++.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|..+++.+ +||||+++++++.+...+|
T Consensus 2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~ 80 (316)
T d1fota_ 2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIF 80 (316)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEE
T ss_pred CHHHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC-CCCCHHHEEEEEEECCEEE
T ss_conf 654708888972076808999999899979999998457754889999999999999863-6967533035685288005
Q ss_pred EEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 9972478896888970--8999999999999999999999967967358999918986899209
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
++|||+.||+|..++. ..+++..++.++.|++.||.|||+++|+||||||+|||++.+|++|
T Consensus 81 ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vk 144 (316)
T d1fota_ 81 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIK 144 (316)
T ss_dssp EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEE
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHEEECCCCCEE
T ss_conf 6765037863223432222111007999999998765541247677055681050386899889
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=1.2e-30 Score=203.89 Aligned_cols=143 Identities=26% Similarity=0.371 Sum_probs=133.9
Q ss_pred CCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCE
Q ss_conf 42224529998745788179999998799754999620123430100688999999999752999861223345203880
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
...+++|++++.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|..+|+.+ +||+|+++++.+.+...
T Consensus 37 ~~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~ 115 (350)
T d1rdqe_ 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSN 115 (350)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred CCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC-CCCCEEECCCCCCCCCC
T ss_conf 88723708988961176808999999899989999998267745889999999999999974-87727403444432222
Q ss_pred EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 999972478896888970--8999999999999999999999967967358999918986899209
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+|++|+++.+|+|..++. +.+++..++.|+.|++.||.|||+++|+||||||+|||++.+|++|
T Consensus 116 ~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ik 181 (350)
T d1rdqe_ 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCCCCCCEE
T ss_conf 232222334662266675158989999999999999989999859986176799993607789788
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=1.3e-30 Score=203.70 Aligned_cols=143 Identities=22% Similarity=0.340 Sum_probs=127.1
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCC--CCCCCCEEEEEECCCC
Q ss_conf 22245299987457881799999987997549996201234301006889999999997529--9986122334520388
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSM 843 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~--~~~~i~~~~~~~~~~~ 843 (908)
+++++|++.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|...+..++ +||+|+++++++.+..
T Consensus 1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~ 80 (364)
T d1omwa3 1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 80 (364)
T ss_dssp CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
T ss_conf 97776851018842889099999999999799999984587542667999999999999985089985889999999899
Q ss_pred EEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 0999972478896888970--8999999999999999999999967967358999918986899209
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
.+|++|||+++|+|..++. ..+++..++.|+.|++.||.|||+++|+||||||+|||++..|.+|
T Consensus 81 ~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iK 147 (364)
T d1omwa3 81 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 147 (364)
T ss_dssp EEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEE
T ss_pred EEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEE
T ss_conf 8899999148983899987325532789999999999999999977962204442216785889679
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=8.4e-31 Score=204.79 Aligned_cols=139 Identities=19% Similarity=0.194 Sum_probs=127.7
Q ss_pred CCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
Q ss_conf 22452999874578817999999879975499962012343010068899999999975299986122334520388099
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~ 846 (908)
.+++|++.+.||+|+||.||+|+++.+++.||+|++.+..... ..+.+.+|..+++.++ ||||+++++++.+...+|
T Consensus 3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~Ei~~l~~l~-HpnIv~~~~~~~~~~~~~ 79 (271)
T d1nvra_ 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLN-HENVVKFYGHRREGNIQY 79 (271)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCC-CTTBCCEEEEEEETTEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCH--HHHHHHHHHHHHHHCC-CCCEEEEEEEECCCCEEE
T ss_conf 8746089989721748099999999999799999984566412--7999999999998579-988846965404674367
Q ss_pred EEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 9972478896888970--8999999999999999999999967967358999918986899209
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
++|||+++|+|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~K 143 (271)
T d1nvra_ 80 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLK 143 (271)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEE
T ss_pred EEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEE
T ss_conf 9886458980899975379999999999999999999999975983575468997887899879
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.7e-30 Score=200.80 Aligned_cols=141 Identities=21% Similarity=0.351 Sum_probs=128.8
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEE
Q ss_conf 24529998745788179999998799754999620123430100688999999999752999861223345203880999
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~l 847 (908)
+++|++++.||+|+||+||+|.++.+++.||+|++.+.........+.+..|..++....+||+|+++++++.+...+|+
T Consensus 1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi 80 (320)
T d1xjda_ 1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 80 (320)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEE
T ss_conf 99718865894087828999999999989999998055533848999999999999984799968789889704983167
Q ss_pred EEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 972478896888970--8999999999999999999999967967358999918986899209
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+|||+++|+|.+++. ..+++..++.++.|++.||.|||+++|+||||||+|||++..|++|
T Consensus 81 vmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~k 143 (320)
T d1xjda_ 81 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIK 143 (320)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred EEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEE
T ss_conf 775037980899864047899999999999999999999868934034765404444899630
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.8e-30 Score=201.58 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=128.3
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE
Q ss_conf 22245299987457881799999987997549996201234301006889999999997529998612233452038809
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l 845 (908)
+.-++|++++.||+|+||.||+|.++.+++.||+|++.+.. .......+.+|..+|+.++ ||||++++++|.+...+
T Consensus 3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ 79 (322)
T d1s9ja_ 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEI 79 (322)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCC-CTTBCCEEEEEECSSEE
T ss_pred CCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHH--CHHHHHHHHHHHHHHHHCC-CCCCCCEEEEEEECCEE
T ss_conf 87568889789712778099999998999699999987540--9789999999999998679-99999499999989999
Q ss_pred EEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCCEEECCCCCCC
Q ss_conf 99972478896888970--899999999999999999999996-7967358999918986899209
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~giiHrDikp~NILid~~g~iK 908 (908)
|++|||+++|+|..++. +.+++..++.++.|++.||.|||+ +||+||||||+|||++.+|.+|
T Consensus 80 ~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vk 145 (322)
T d1s9ja_ 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145 (322)
T ss_dssp EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEE
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEE
T ss_conf 999976799868998742499999999999999999999999859997144577994687899899
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5e-30 Score=199.98 Aligned_cols=136 Identities=14% Similarity=0.169 Sum_probs=125.8
Q ss_pred CCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEE
Q ss_conf 45299987457881799999987997549996201234301006889999999997529998612233452038809999
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~lv 848 (908)
+.|++++.||+|+||.||+|.++.+++.||+|++.+... ...+.+.+|..+++.++ ||||+++++++.+...+|++
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv 95 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDELWVV 95 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCC---HHHHHHHHHHHHHHHCC-CCCEEEEEEEEEECCEEEEE
T ss_conf 053887898128582999999989998999999843017---27999999999998679-99880585779889998999
Q ss_pred EECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 72478896888970-8999999999999999999999967967358999918986899209
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~~g~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|||+++|+|..++. +++++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 96 mEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vk 156 (293)
T d1yhwa1 96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVK 156 (293)
T ss_dssp EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred EEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEE
T ss_conf 9703798089886415999999999999999999999987972267768886887899686
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=2e-29 Score=196.22 Aligned_cols=141 Identities=17% Similarity=0.181 Sum_probs=128.9
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHC------CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
Q ss_conf 245299987457881799999987997549996201234301------00688999999999752999861223345203
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC------LGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~------~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
.++|++.+.||+|+||+||+|+++.+++.||+|++.+..... ....+.+.+|..+++.+..||||+++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred CCCCEECEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf 66388852884176849999999999989999999624464114788899999999999999985079974799762146
Q ss_pred CCEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 880999972478896888970--8999999999999999999999967967358999918986899209
Q 002560 842 SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
...+|++|||+++|+|.+++. +++++..++.|+.|++.||.|||+++|+||||||+|||++.+|.+|
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~k 150 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIK 150 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEE
T ss_conf 760599997689866899998659999999999999999999999875994323462548986899838
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=6.5e-30 Score=199.27 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=127.1
Q ss_pred CEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEE
Q ss_conf 52999874578817999999879975499962012343010068899999999975299986122334520388099997
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~lv~ 849 (908)
.|+.++.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|..+++.+. ||||+++++++.+...+|++|
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~iv~ 94 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVM 94 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred HCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCC-CCCEEEEEEEEEECCEEEEEE
T ss_conf 5676279701888099999998999399999984444358899999999999999778-999823899999899889999
Q ss_pred ECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 2478896888970--8999999999999999999999967967358999918986899209
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|||++|+|..++. +++++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~K 155 (309)
T d1u5ra_ 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK 155 (309)
T ss_dssp ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEE
T ss_pred EECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCCCEE
T ss_conf 8069994578997379999999999999999999999868976667884217987999789
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.2e-29 Score=194.27 Aligned_cols=143 Identities=15% Similarity=0.131 Sum_probs=127.7
Q ss_pred CCCCCCCC-EEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCC---CHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 45422245-2999874578817999999879975499962012343010---0688999999999752999861223345
Q 002560 763 LAKVSLTD-MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCL---GKEVQVLKEKNLMKSVSPSACVPQILCT 838 (908)
Q Consensus 763 ~~~~~~~~-~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~---~~~~~i~~E~~il~~l~~~~~i~~~~~~ 838 (908)
|+.-.+++ |++++.||+|+||.||+|+++.+++.||+|++.+...... ...+.+.+|..+|+.++ ||||++++++
T Consensus 3 ~~~~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~ 81 (293)
T d1jksa_ 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEV 81 (293)
T ss_dssp CBCSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEE
T ss_pred CCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCEEEE
T ss_conf 657885567798279811789599999999999899999987566321340689999999999998679-9899938899
Q ss_pred ECCCCEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCC
Q ss_conf 203880999972478896888970--89999999999999999999999679673589999189868992
Q 002560 839 CADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 839 ~~~~~~l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~ 906 (908)
+.+...+|++||||++|+|.+++. +.+++..++.++.|++.||.|||+++|+||||||+|||++..|.
T Consensus 82 ~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~ 151 (293)
T d1jksa_ 82 YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 151 (293)
T ss_dssp EECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSS
T ss_pred EEECCEEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCC
T ss_conf 9979989999986778643100103564215578999999999987666254221133301279825898
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-29 Score=197.65 Aligned_cols=136 Identities=12% Similarity=0.152 Sum_probs=124.5
Q ss_pred CCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEE
Q ss_conf 45299987457881799999987997549996201234301006889999999997529998612233452038809999
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~lv 848 (908)
+.|++++.||+|+||.||+|+++.++..+|+|++.+.. ....+.+.+|..+++.++ ||||+++++++.+...+|++
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lv 87 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWIL 87 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCC---HHHHHHHHHHHHHHHHCC-CCCCCEEEEEEEECCEEEEE
T ss_conf 37598479930778199999999999399999987289---999999999999998679-99988498898009958999
Q ss_pred EECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 72478896888970---8999999999999999999999967967358999918986899209
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|||+++|+|..++. +++++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~K 150 (288)
T d2jfla1 88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIK 150 (288)
T ss_dssp EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred EECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECCCCCEE
T ss_conf 962799818899986289999999999999999999999988988714070031487899989
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.97 E-value=2e-29 Score=196.28 Aligned_cols=138 Identities=12% Similarity=0.119 Sum_probs=124.0
Q ss_pred CCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
Q ss_conf 22452999874578817999999879975499962012343010068899999999975299986122334520388099
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~ 846 (908)
..++|++++.||+|+||.||+|.++.+++.||+|++.+.... ....+.+|..+|+.+ +||||++++++|.+...+|
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ 102 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMV 102 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHH---HHHHHHHHHHHHHHC-CCCCCCCEEEEEEECCEEE
T ss_conf 540359989993177829999999899979999998872646---799999999999867-9979891999999899999
Q ss_pred EEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC--CCCCCC
Q ss_conf 9972478896888970---8999999999999999999999967967358999918986--899209
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD--KSGHLQ 908 (908)
Q Consensus 847 lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid--~~g~iK 908 (908)
++||||++|+|.+++. .++++..++.++.|++.||.|||++||+||||||+|||++ ..|.+|
T Consensus 103 ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vk 169 (352)
T d1koba_ 103 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVK 169 (352)
T ss_dssp EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEE
T ss_pred EEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEE
T ss_conf 9998289980888898638998999999999999999999997792651314455311346788489
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.97 E-value=2.1e-29 Score=196.10 Aligned_cols=138 Identities=15% Similarity=0.135 Sum_probs=124.7
Q ss_pred CCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
Q ss_conf 22452999874578817999999879975499962012343010068899999999975299986122334520388099
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~ 846 (908)
-+++|++++.||+|+||.||+|.++.+++.||+|++.+.... ..+.+.+|..+++.++ ||||+++++++.+...+|
T Consensus 24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~---~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ 99 (350)
T d1koaa2 24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES---DKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMV 99 (350)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHH---HHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHH---HHHHHHHHHHHHHHCC-CCCCCCEEEEEEECCEEE
T ss_conf 865758988984076819999998899989999998452431---6999999999998679-979992999999899999
Q ss_pred EEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC--CCCCC
Q ss_conf 9972478896888970---89999999999999999999999679673589999189868--99209
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK--SGHLQ 908 (908)
Q Consensus 847 lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~--~g~iK 908 (908)
++|||+++|+|.+++. +++++..++.++.|++.||.|||++||+||||||+|||++. .|.+|
T Consensus 100 ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vk 166 (350)
T d1koaa2 100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK 166 (350)
T ss_dssp EEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEE
T ss_pred EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCEEE
T ss_conf 9998579988999997623789999999999999999999975697600015467364168898699
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.2e-29 Score=192.81 Aligned_cols=133 Identities=11% Similarity=0.076 Sum_probs=122.1
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEE
Q ss_conf 24529998745788179999998799754999620123430100688999999999752999861223345203880999
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~l 847 (908)
++.|++++.||+|+||.||+|.++.+++.||+|++.+... ....+.+|..+|..++ ||||+++++++.+...+|+
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~----~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~l 78 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISILNIAR-HRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH----HHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEEEE
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCC----CHHHHHHHHHHHHHCC-CCCCCEEEEEEEECCEEEE
T ss_conf 0105887898317783999999989996999999757866----5999999999998579-9798909899988998899
Q ss_pred EEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 972478896888970---8999999999999999999999967967358999918986899
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 848 v~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g 905 (908)
+||||+|++|.+++. .++++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 79 vmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~ 139 (321)
T d1tkia_ 79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR 139 (321)
T ss_dssp EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS
T ss_pred EEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC
T ss_conf 9953899808899875389999999999999999999999876997513554443443788
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.96 E-value=3.8e-29 Score=194.54 Aligned_cols=137 Identities=17% Similarity=0.204 Sum_probs=124.3
Q ss_pred CCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEE
Q ss_conf 45299987457881799999987997549996201234301006889999999997529998612233452038809999
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~lv 848 (908)
+.|++.+.||+|+||.||+|+++.+++.||+|++.+..... ....+.+|..++..++ ||||+++++++.+...+|++
T Consensus 9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv 85 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIAVLHKIK-HPNIVALDDIYESGGHLYLI 85 (307)
T ss_dssp GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred CCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHHHH--HHHHHHHHHHHHHHCC-CCCCCCEEEEEEECCEEEEE
T ss_conf 66699889940658399999999999899999981577312--8999999999998679-98999198999989988898
Q ss_pred EECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC---CCCCC
Q ss_conf 72478896888970--89999999999999999999999679673589999189868---99209
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK---SGHLQ 908 (908)
Q Consensus 849 ~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~---~g~iK 908 (908)
||||+||+|.+++. +.+++..++.++.|++.||.|||+++|+||||||+|||+.. +|.+|
T Consensus 86 mE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vk 150 (307)
T d1a06a_ 86 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM 150 (307)
T ss_dssp ECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEE
T ss_pred EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCEEE
T ss_conf 85268984888653036788789999999999998752413055687046300110468882499
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=1e-28 Score=191.91 Aligned_cols=139 Identities=16% Similarity=0.159 Sum_probs=125.9
Q ss_pred CCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC----CE
Q ss_conf 45299987457881799999987997549996201234301006889999999997529998612233452038----80
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----MH 844 (908)
Q Consensus 769 ~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~----~~ 844 (908)
++|++.+.||+|+||.||+|.++.+++.||+|++.+....+......+.+|..+++.++ ||+|++++..+... ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~-hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEECSSSEE
T ss_pred CEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCC-CCCCCCCCCEEEECCCCCCE
T ss_conf 20698689960899299999999999899999985566469899999999999998569-99887311435432688766
Q ss_pred EEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 999972478896888970--8999999999999999999999967967358999918986899209
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+|++|||++|++|..++. +++++..++.++.|++.||.|||++||+||||||+|||++..+..+
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~ 151 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 151 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEE
T ss_pred EEEEEECCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 999997788987101120358999999999999999999999857952763467556657543201
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=8.4e-29 Score=192.38 Aligned_cols=139 Identities=17% Similarity=0.221 Sum_probs=124.9
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC--CCEE
Q ss_conf 24529998745788179999998799754999620123430100688999999999752999861223345203--8809
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMHA 845 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~--~~~l 845 (908)
.+||++++.||+|+||.||+|.++.+++.||+|.+.+..... ...+.+.+|..+++.++ ||||+++++.+.+ ...+
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~ 80 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTL 80 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCH-HHHHHHHHHHHHTTSCC-CTTBCCEEEEEEC----CE
T ss_pred CHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCH-HHHHHHHHHHHHHHHCC-CCCEEEEEEEEEECCCCEE
T ss_conf 333799679830889199999999999799999987465797-99999999999999778-9998248999991789989
Q ss_pred EEEEECCCCCCHHHHHC------CCCCHHHHHHHHHHHHHHHHHHHHCC-----CEECCCCCCCEEECCCCCCC
Q ss_conf 99972478896888970------89999999999999999999999679-----67358999918986899209
Q 002560 846 GLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRG-----VLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~g-----iiHrDikp~NILid~~g~iK 908 (908)
|++||||++|+|.+++. ..+++..++.++.|++.||.|||+++ |+||||||+|||++.+|.+|
T Consensus 81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vk 154 (269)
T d2java1 81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 154 (269)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEE
T ss_pred EEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCEE
T ss_conf 99995689993899998515457899999999999999999999997167788788586765425747888579
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=5.5e-29 Score=193.54 Aligned_cols=138 Identities=15% Similarity=0.194 Sum_probs=126.4
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE
Q ss_conf 22245299987457881799999987997549996201234301006889999999997529998612233452038809
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l 845 (908)
+..++|++.+.||+|+||.||+|.++.+++.||+|++.+.. ...+.+.+|..+++.++ ||||+++++++.+...+
T Consensus 14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~ 88 (287)
T d1opja_ 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPF 88 (287)
T ss_dssp CCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSC
T ss_pred ECHHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCC----CHHHHHHHHHHHHHHCC-CCCEECCCCCEEECCEE
T ss_conf 45799398659820888089999999999699999977761----03999999999998679-99882677527457854
Q ss_pred EEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 99972478896888970----8999999999999999999999967967358999918986899209
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|++|||+++|+|..++. ..+++..++.++.|++.||.|||+++|+||||||+|||++.+|.+|
T Consensus 89 ~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~K 155 (287)
T d1opja_ 89 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 155 (287)
T ss_dssp EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEE
T ss_conf 7876314676067775303554157999999999999978889878930576045768998999289
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.8e-28 Score=190.41 Aligned_cols=139 Identities=12% Similarity=0.118 Sum_probs=122.0
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEE
Q ss_conf 24529998745788179999998799754999620123430100688999999999752999861223345203880999
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~l 847 (908)
+++|++++.||+|+||.||+|.++.+++.||+|++.+.... ......+.+|..+++.+ +||+|+++++++.+...+|+
T Consensus 1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~i 78 (298)
T d1gz8a_ 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYL 78 (298)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred CCCCEECCEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-HHHHHHHHHHHHHHHHC-CCCCEEEECCCCCCCCCEEE
T ss_conf 99977651772376809999999999979999998022257-58999999999999867-99838874453322432037
Q ss_pred EEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 972478896888970---8999999999999999999999967967358999918986899209
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+||++.++.+..... ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 79 v~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~k 142 (298)
T d1gz8a_ 79 VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 142 (298)
T ss_dssp EEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred EEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCCCCE
T ss_conf 8862377445554420256888899999999999999986528899213571140113467621
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=5.2e-28 Score=187.49 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=115.4
Q ss_pred CCCCEEEEE-EECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC----
Q ss_conf 224529998-745788179999998799754999620123430100688999999999752999861223345203----
Q 002560 767 SLTDMEWRK-CLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD---- 841 (908)
Q Consensus 767 ~~~~~~~~~-~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~---- 841 (908)
-+++|++.. .||+|+||.||+|.++.+++.||+|++.+. ..+.+|..++..+.+||||++++++|.+
T Consensus 9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~ 80 (335)
T d2ozaa1 9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAG 80 (335)
T ss_dssp GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred CCCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCC--------HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC
T ss_conf 0148798107965454869999998899989999998974--------77999999999866999978298999503468
Q ss_pred CCEEEEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 880999972478896888970----8999999999999999999999967967358999918986899
Q 002560 842 SMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 842 ~~~l~lv~e~~~~g~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g 905 (908)
..++|++||||+||+|.+++. .++++..++.++.|++.||.|||++||+||||||+|||++..+
T Consensus 81 ~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~ 148 (335)
T d2ozaa1 81 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 148 (335)
T ss_dssp EEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS
T ss_pred CCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 97899999778998499999862787757999999999999999999976986444100220113555
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.4e-27 Score=184.74 Aligned_cols=141 Identities=13% Similarity=0.142 Sum_probs=123.6
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCC-----EEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
Q ss_conf 222452999874578817999999879975-----499962012343010068899999999975299986122334520
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN-----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~-----~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||+|.+..+++ .+|+|.+..... ......+.+|..++..+.+||||+++++++.
T Consensus 34 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~ 111 (325)
T d1rjba_ 34 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACT 111 (325)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEECCCCC--HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 77899397019830788199999985788554204999999663358--7899999999999997158996868778886
Q ss_pred CCCEEEEEEECCCCCCHHHHHC-------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf 3880999972478896888970-------------------------899999999999999999999996796735899
Q 002560 841 DSMHAGLLLNTYLACPLASILH-------------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVS 895 (908)
Q Consensus 841 ~~~~l~lv~e~~~~g~L~~~l~-------------------------~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDik 895 (908)
+...+|++||||++|+|.+++. ..+++..++.++.|++.||.|||+++|+|||||
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK 191 (325)
T d1rjba_ 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA 191 (325)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred ECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCC
T ss_conf 29958999972799959999986257775102210000122200125778999999999999999999973990505270
Q ss_pred CCCEEECCCCCCC
Q ss_conf 9918986899209
Q 002560 896 PDVLMLDKSGHLQ 908 (908)
Q Consensus 896 p~NILid~~g~iK 908 (908)
|+|||++.+|.+|
T Consensus 192 p~Nill~~~~~~K 204 (325)
T d1rjba_ 192 ARNVLVTHGKVVK 204 (325)
T ss_dssp GGGEEEETTTEEE
T ss_pred HHCCCCCCCCEEE
T ss_conf 3214434598289
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=1e-27 Score=185.68 Aligned_cols=141 Identities=11% Similarity=0.111 Sum_probs=124.8
Q ss_pred CCCCCCEEEEEEECCCCEEEEEEEEECCCCC---EEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
Q ss_conf 4222452999874578817999999879975---4999620123430100688999999999752999861223345203
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 765 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~---~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
.+..++|++.+.||+|+||.||+|.++.+++ .+|+|.+.... .....+.+.+|..+|+.+ +||||+++++++.+
T Consensus 22 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~ 98 (299)
T d1jpaa_ 22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTK 98 (299)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS
T ss_pred HHCHHHCEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHC-CCCCCCCEEEEEEE
T ss_conf 208004278569802788299999995799788999999978445--989999999999999857-99888618999962
Q ss_pred CCEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 880999972478896888970---8999999999999999999999967967358999918986899209
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~l~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
...+|++|||+++|+|..++. +.+++..+..++.|++.||.|||+++|+||||||+|||++.+|.+|
T Consensus 99 ~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~K 168 (299)
T d1jpaa_ 99 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCK 168 (299)
T ss_dssp SSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEE
T ss_pred CCEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEE
T ss_conf 8877999972279853002104567999999999999999988988527983576150448988999199
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.95 E-value=2e-27 Score=183.91 Aligned_cols=135 Identities=17% Similarity=0.251 Sum_probs=119.9
Q ss_pred CCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC--CCE
Q ss_conf 224529998745788179999998799754999620123430100688999999999752999861223345203--880
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMH 844 (908)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~--~~~ 844 (908)
..++|++++.||+|+||+||+|+++.+++.||+|++++. ..+.+.+|..+|+.+.+||+|++++..+.. ..+
T Consensus 33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~ 106 (328)
T d3bqca1 33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106 (328)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCS
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCC
T ss_conf 986718978983174819999998899979999998889------99999999999985157998767999998168771
Q ss_pred EEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCC-CC
Q ss_conf 99997247889688897089999999999999999999999679673589999189868992-09
Q 002560 845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH-LQ 908 (908)
Q Consensus 845 l~lv~e~~~~g~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~-iK 908 (908)
++++||++.+++|..+. ..+++..++.++.|++.||.|||++||+||||||+|||++.++. +|
T Consensus 107 ~~~v~e~~~~~~L~~~~-~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vk 170 (328)
T d3bqca1 107 PALVFEHVNNTDFKQLY-QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 170 (328)
T ss_dssp EEEEEECCCSCBGGGTT-TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEEEEECCCCCHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEE
T ss_conf 26888631798589974-68999999999999999998876433443456441237748998366
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.3e-27 Score=182.53 Aligned_cols=137 Identities=11% Similarity=0.147 Sum_probs=120.7
Q ss_pred CEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC----CCEE
Q ss_conf 529998745788179999998799754999620123430100688999999999752999861223345203----8809
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD----SMHA 845 (908)
Q Consensus 770 ~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~----~~~l 845 (908)
.|++.+.||+|+||.||+|.++.++..+|+|.+....... ...+.+.+|..+++.++ ||||+++++++.+ ...+
T Consensus 10 y~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~-~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~~ 87 (270)
T d1t4ha_ 10 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCI 87 (270)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEE
T ss_pred EEEEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHCCH-HHHHHHHHHHHHHHHCC-CCCEEEEEEEEEECCCCCCEE
T ss_conf 7885169700828499999999999599999985122798-99999999999998579-998506999984033458889
Q ss_pred EEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCCCCEEECC-CCCCC
Q ss_conf 99972478896888970--89999999999999999999999679--673589999189868-99209
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDikp~NILid~-~g~iK 908 (908)
|++|||+++|+|..++. ..+++..++.++.|++.||.|||+++ |+||||||+|||++. +|.+|
T Consensus 88 ~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~K 155 (270)
T d1t4ha_ 88 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVK 155 (270)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEE
T ss_pred EEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCEEECCCCCEE
T ss_conf 99995789894899975135546999999999999999999978997996876743511667999889
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.3e-27 Score=185.04 Aligned_cols=145 Identities=21% Similarity=0.341 Sum_probs=129.0
Q ss_pred CCCCCCCEEEEEEECCCCEEEEEEEEE---CCCCCEEEEEEECHHHHHC-CCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 542224529998745788179999998---7997549996201234301-006889999999997529998612233452
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLL---RDSENFLSLKRFSKQKVKC-LGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 764 ~~~~~~~~~~~~~lg~G~~g~V~~~~~---~~t~~~~AiK~~~~~~~~~-~~~~~~i~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.++.+++|++++.||+|+||.||+|.+ +.+++.||+|++.+..... ....+.+.+|..+++.+++||+|++++..+
T Consensus 19 ~~~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~ 98 (322)
T d1vzoa_ 19 EKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 98 (322)
T ss_dssp CCCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE
T ss_pred CCCCHHCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 53451025999898328783999999876588794899999836772101689999999999998646798399962000
Q ss_pred CCCCEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 03880999972478896888970--8999999999999999999999967967358999918986899209
Q 002560 840 ADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 840 ~~~~~l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
.+...++++||++.+++|..++. +.+++..++.++.|++.||.|+|+++|+||||||+|||++.+|.+|
T Consensus 99 ~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vk 169 (322)
T d1vzoa_ 99 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV 169 (322)
T ss_dssp EETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCEE
T ss_conf 24873001231234117999987304543788888899999999885149989654773201246999888
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.95 E-value=3.3e-27 Score=182.54 Aligned_cols=138 Identities=13% Similarity=0.148 Sum_probs=123.7
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEE
Q ss_conf 24529998745788179999998799754999620123430100688999999999752999861223345203880999
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~l 847 (908)
+++|++++.||+|+||+||+|+++ +++.||+|++.+.... ....+.+.+|..+|+.+ +||+|++++.++.+.+..|+
T Consensus 1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i 77 (286)
T d1ob3a_ 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKED-EGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVL 77 (286)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEE
T ss_pred CCCCEECCEEECCCCCEEEEEEEC-CCCEEEEEEEEHHHCC-HHHHHHHHHHHHHHHHC-CCCCEEEEEEECCCCCCEEE
T ss_conf 999634318722778189999968-9999999998123268-58999999999999867-99868766012046773158
Q ss_pred EEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 972478896888970--8999999999999999999999967967358999918986899209
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+++++.++.+..+.. +.+++..++.++.|++.||+|||+++|+||||||+|||++.+|.+|
T Consensus 78 ~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~k 140 (286)
T d1ob3a_ 78 VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELK 140 (286)
T ss_dssp EEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred EEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCEE
T ss_conf 997400456789986047751445689999999999986057488267877505686899787
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.1e-27 Score=182.64 Aligned_cols=146 Identities=11% Similarity=0.154 Sum_probs=126.6
Q ss_pred CCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCE--EEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 344542224529998745788179999998799754--999620123430100688999999999752999861223345
Q 002560 761 SSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENF--LSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838 (908)
Q Consensus 761 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~--~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~ 838 (908)
+.+..+.+++|++.+.||+|+||.||+|.++.++.. +|+|.+.... .....+.+.+|..+|+.+.+||||++++++
T Consensus 2 ~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~ 79 (309)
T d1fvra_ 2 TIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGA 79 (309)
T ss_dssp CCSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEE
T ss_pred CCCCCCCHHHCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 989966879968877982078828999999899969999999978233--857999999999999862289988367888
Q ss_pred ECCCCEEEEEEECCCCCCHHHHHC------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEE
Q ss_conf 203880999972478896888970------------------89999999999999999999999679673589999189
Q 002560 839 CADSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900 (908)
Q Consensus 839 ~~~~~~l~lv~e~~~~g~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NIL 900 (908)
+.+...+|++|||+++|+|..+++ ..+++.....++.|++.|+.|+|+++|+||||||+|||
T Consensus 80 ~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL 159 (309)
T d1fvra_ 80 CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL 159 (309)
T ss_dssp EEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred EECCCEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
T ss_conf 84187369999802898699998640355555123101234578999999999999999987663089545550520489
Q ss_pred ECCCCCCC
Q ss_conf 86899209
Q 002560 901 LDKSGHLQ 908 (908)
Q Consensus 901 id~~g~iK 908 (908)
++..+.+|
T Consensus 160 ~~~~~~~k 167 (309)
T d1fvra_ 160 VGENYVAK 167 (309)
T ss_dssp ECGGGCEE
T ss_pred ECCCCCEE
T ss_conf 86887638
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.8e-27 Score=182.14 Aligned_cols=138 Identities=14% Similarity=0.150 Sum_probs=123.0
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC----
Q ss_conf 2452999874578817999999879975499962012343010068899999999975299986122334520388----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM---- 843 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~---- 843 (908)
.+.|++++.||+|+||.||+|.++.+++.||+|++.+... .....+.+.+|..+|+.+. ||++++++++|....
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-hpniv~l~~~~~~~~~~~~ 94 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETLDD 94 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSSTTT
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHC-CHHHHHHHHHHHHHHHHCC-CCCEEEEEEEECCCCCCCC
T ss_conf 7718998898017781999999999998999999852225-9699999999999998668-9875479998635765555
Q ss_pred --EEEEEEECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf --0999972478896888970-8999999999999999999999967967358999918986899209
Q 002560 844 --HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 --~l~lv~e~~~~g~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
.+|++|||+ +.+|..++. .++++..++.++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 95 ~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~k 161 (346)
T d1cm8a_ 95 FTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK 161 (346)
T ss_dssp CCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred CCEEEEEEECC-CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 41599998405-52189998740226999999999999999998737876456685111121001221
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=6.8e-27 Score=180.55 Aligned_cols=139 Identities=17% Similarity=0.168 Sum_probs=126.9
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEE
Q ss_conf 24529998745788179999998799754999620123430100688999999999752999861223345203880999
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~l 847 (908)
+++|++++.||+|+||+||+|+++.+++.||+|++++... .......+.+|..+++.++ |++|++++.++.+....++
T Consensus 1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~i 78 (292)
T d1unla_ 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTL 78 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEE
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC-CHHHHHHHHHHHHHHHHCC-CCCEEEECCCCCCCCCEEE
T ss_conf 9997862697128681999999999996999999803217-8689999999999998567-5788821354444431158
Q ss_pred EEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 972478896888970--8999999999999999999999967967358999918986899209
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+++++.++++..++. +.+++..++.++.|++.||.|||+++|+||||||+|||++..+.+|
T Consensus 79 v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~k 141 (292)
T d1unla_ 79 VFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELK 141 (292)
T ss_dssp EEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEE
T ss_conf 863023322211212356540367899999999998774339986001467612113378266
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=9.9e-28 Score=185.74 Aligned_cols=135 Identities=17% Similarity=0.194 Sum_probs=120.3
Q ss_pred EEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHC--CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEE
Q ss_conf 9987457881799999987997549996201234301--00688999999999752999861223345203880999972
Q 002560 773 WRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC--LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 773 ~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~--~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~lv~e 850 (908)
.++.||+|+||+||+|.++.+++.||+|++.+..... ....+.+.+|..+++.++ ||||+++++++.+..++|++||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~~~~~~~~~ivmE 80 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFD 80 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTCCEEEEE
T ss_pred CCEEECCCCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEEEECCCCCEEEHHH
T ss_conf 563851272829999999999969999998420212456799999999999998679-9998689854225874022045
Q ss_pred CCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 478896888970--8999999999999999999999967967358999918986899209
Q 002560 851 TYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|+.++++..+.. ..+++..++.++.|++.||.|||++||+||||||+|||++..|.+|
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~K 140 (299)
T d1ua2a_ 81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLK 140 (299)
T ss_dssp CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred HHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCC
T ss_conf 534507765541266778999999999999999886316355035776258853778411
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.2e-27 Score=181.88 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=118.7
Q ss_pred CCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC-----
Q ss_conf 452999874578817999999879975499962012343010068899999999975299986122334520388-----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM----- 843 (908)
Q Consensus 769 ~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~----- 843 (908)
..|++++.||+|+||+||+|.++.+++.||+|++.+.. .....+.+.+|..+|+.++ ||++++++..+....
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~-hp~iv~~~~~~~~~~~~~~~ 84 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMK 84 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTTCC
T ss_pred CCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHC--CHHHHHHHHHHHHHHHHCC-CCCCCCEEEEEEECCCCCCC
T ss_conf 98599789940648099999999999499999980310--9589999999999999768-98988588899505645541
Q ss_pred EEEEEEECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 0999972478896888970-8999999999999999999999967967358999918986899209
Q 002560 844 HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~l~lv~e~~~~g~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
++|+++ ++.+++|.+++. .++++..++.++.|++.||.|||++||+||||||+|||++..|++|
T Consensus 85 ~~~l~~-~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~k 149 (345)
T d1pmea_ 85 DVYLVT-HLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 149 (345)
T ss_dssp CEEEEE-ECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred EEEEEE-EECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEE
T ss_conf 499999-62598656644058999999999999999999999978986777876437887999778
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.4e-27 Score=183.42 Aligned_cols=139 Identities=14% Similarity=0.207 Sum_probs=121.0
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC-----
Q ss_conf 245299987457881799999987997549996201234301006889999999997529998612233452038-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
.+.|++++.||+|+||+||+|+++.+++.||+|++.+... .....+.+.+|..+|+.++ |+++++++.++...
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-h~~iv~~~~~~~~~~~~~~ 94 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEE 94 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-SHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSTTT
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCHHC-CHHHHHHHHHHHHHHHHCC-CCCEEEEEEEEEECCCCCC
T ss_conf 9871888898317883999999999997999999882002-8689999999999998668-9874259999963464566
Q ss_pred CEEEEEEECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 80999972478896888970-8999999999999999999999967967358999918986899209
Q 002560 843 MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~l~lv~e~~~~g~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
...+++++++.+++|..++. +++++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 95 ~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~k 161 (348)
T d2gfsa1 95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161 (348)
T ss_dssp CCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred CCEEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8649999962588623200224530999999999999999999738876516677633455432200
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=6.5e-27 Score=180.70 Aligned_cols=137 Identities=12% Similarity=0.168 Sum_probs=122.8
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE
Q ss_conf 22245299987457881799999987997549996201234301006889999999997529998612233452038809
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l 845 (908)
+..++|++.+.||+|+||.||++.++ ++..+|+|++.+... ..+.+.+|..++..++ ||||+++++++.+...+
T Consensus 2 idp~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~ 75 (263)
T d1sm2a_ 2 IDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPI 75 (263)
T ss_dssp BCCSCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSC
T ss_pred CCHHHCEEEEEEEECCCEEEEEEEEC-CCCEEEEEEECCCCC----CHHHHHHHHHHHHHCC-CCCCCCCCCEECCCCCE
T ss_conf 89699588889820888299999988-999999999878867----6899999999999668-99756535243159933
Q ss_pred EEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 99972478896888970---8999999999999999999999967967358999918986899209
Q 002560 846 GLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|++|||+++|+|..++. ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 76 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~K 141 (263)
T d1sm2a_ 76 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIK 141 (263)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEE
T ss_pred EEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCCCEE
T ss_conf 799983699918997520134788999999999999987765316431044315326666887768
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.6e-26 Score=178.23 Aligned_cols=138 Identities=16% Similarity=0.212 Sum_probs=121.4
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC------C
Q ss_conf 2452999874578817999999879975499962012343010068899999999975299986122334520------3
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA------D 841 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~------~ 841 (908)
++.|++++.||+|+||+||+|+++.+++.||+|++.+... .......+.+|..+++.+ +||+|++++++|. .
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~~~ 93 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEE 93 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTT
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHC-CHHHHHHHHHHHHHHHHC-CCCCEEEEEEEEECCCCCCC
T ss_conf 3775998896217585999999999998999999882336-979999999999999864-89876489989702564345
Q ss_pred CCEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 8809999724788968889708999999999999999999999967967358999918986899209
Q 002560 842 SMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~l~lv~e~~~~g~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
..++|++|||+.+ ++.+.+...+++..++.++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 94 ~~~~~iv~Ey~~~-~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~k 159 (355)
T d2b1pa1 94 FQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 159 (355)
T ss_dssp CCEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEE
T ss_pred CCEEEEEEECCCH-HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 7626999841446-77876503899999999999999999886522112456776321136544313
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.7e-26 Score=178.06 Aligned_cols=139 Identities=10% Similarity=0.145 Sum_probs=120.4
Q ss_pred CCCCCEEEEEE-ECCCCEEEEEEEEECCC--CCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf 22245299987-45788179999998799--7549996201234301006889999999997529998612233452038
Q 002560 766 VSLTDMEWRKC-LYSTDCSEIGLVLLRDS--ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~-lg~G~~g~V~~~~~~~t--~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
+..++|.+.+. ||+|+||.||+|.++.+ +..||+|.+.+.. .....+.+.+|..+++.++ ||||+++++++.+
T Consensus 5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~- 80 (285)
T d1u59a_ 5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLD-NPYIVRLIGVCQA- 80 (285)
T ss_dssp CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEES-
T ss_pred ECCCCEEECCCEEECCCCEEEEEEEEECCCCCEEEEEEEECHHC--CHHHHHHHHHHHHHHHHCC-CCCEEEEEEEECC-
T ss_conf 54447188784873060809999999608976899999988203--9789999999999998679-9888068656036-
Q ss_pred CEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 80999972478896888970---8999999999999999999999967967358999918986899209
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~l~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
..+|++|||+++|+|.+++. ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 81 ~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~K 149 (285)
T d1u59a_ 81 EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAK 149 (285)
T ss_dssp SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEE
T ss_pred CEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEE
T ss_conf 807999980789968997521256999999999999999987899868810576764660454688542
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.2e-26 Score=179.03 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=112.7
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC-----
Q ss_conf 222452999874578817999999879975499962012343010068899999999975299986122334520-----
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA----- 840 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~----- 840 (908)
....+|+.++.||+|+||+||+|+++.+++.||+|++.+.... ..+|..+|+.+ +|++|++++.+|.
T Consensus 17 ~~~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-------~~~Ei~il~~l-~h~niv~~~~~~~~~~~~ 88 (350)
T d1q5ka_ 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQIMRKL-DHCNIVRLRYFFYSSGEK 88 (350)
T ss_dssp CEEEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS-------CCHHHHHHHHC-CCTTBCCEEEEEEEC--C
T ss_pred CCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCHH-------HHHHHHHHHHC-CCCCCCCEEEEEEECCCC
T ss_conf 5667767516982176839999999999979999998816068-------99999999866-898987387899744765
Q ss_pred -CCCEEEEEEECCCCCCHHHHH---C--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC-CCC
Q ss_conf -388099997247889688897---0--8999999999999999999999967967358999918986899-209
Q 002560 841 -DSMHAGLLLNTYLACPLASIL---H--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQ 908 (908)
Q Consensus 841 -~~~~l~lv~e~~~~g~L~~~l---~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g-~iK 908 (908)
+..++|++|||++++.+..+. . ..+++..++.++.|++.||+|||++||+||||||+|||++.++ .+|
T Consensus 89 ~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~k 163 (350)
T d1q5ka_ 89 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 163 (350)
T ss_dssp CSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEE
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEE
T ss_conf 773189999841688607888863103689999999999999999999998668764578860378735897116
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.8e-26 Score=175.90 Aligned_cols=136 Identities=13% Similarity=0.142 Sum_probs=120.2
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE
Q ss_conf 22245299987457881799999987997549996201234301006889999999997529998612233452038809
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l 845 (908)
+..++|++.+.||+|+||.||+|.++ ++..||+|++.+... ..+.+.+|..++..+ +||||+++++++.+ ..+
T Consensus 10 i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~-~~~ 82 (272)
T d1qpca_ 10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPI 82 (272)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSC
T ss_pred CCHHHEEEEEEEECCCCCEEEEEEEC-CCCEEEEEEECCCCC----CHHHHHHHHHHHHHC-CCCCEEEEEEEECC-CCE
T ss_conf 38899388679810798289999999-999999999864768----889999999999867-99988578731045-976
Q ss_pred EEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 99972478896888970----8999999999999999999999967967358999918986899209
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|++|||+++|+|..++. .++++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 83 ~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~K 149 (272)
T d1qpca_ 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCK 149 (272)
T ss_dssp EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEE
T ss_pred EEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEE
T ss_conf 9999957898288887514789887889999999999999999748954675642251562024404
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.1e-26 Score=175.12 Aligned_cols=141 Identities=11% Similarity=0.085 Sum_probs=124.1
Q ss_pred CCCCCCEEEEEEECCCCEEEEEEEEECCCC----CEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
Q ss_conf 422245299987457881799999987997----5499962012343010068899999999975299986122334520
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSE----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 765 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~t~----~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
.+..++|.+.+.||+|+||.||+|.++.++ ..+|+|.+.... .......+.+|..++..++ ||||+++++++.
T Consensus 3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-H~nIv~~~g~~~ 79 (283)
T d1mqba_ 3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVIS 79 (283)
T ss_dssp BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC
T ss_pred CCCHHHEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCC-CCCEEEEEEEEE
T ss_conf 5788996861598117790999999968998787999999988445--9689999999999998568-987832367783
Q ss_pred CCCEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 3880999972478896888970---8999999999999999999999967967358999918986899209
Q 002560 841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~l~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+...++++||++.++++..++. ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 80 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~K 150 (283)
T d1mqba_ 80 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCK 150 (283)
T ss_dssp SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEE
T ss_pred CCCCEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEE
T ss_conf 38803899972135740222102345420899999999999854121212342576564427888998499
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=7.4e-26 Score=174.13 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=121.0
Q ss_pred CCCCCCEEEEEEECCCCEEEEEEEEECCCCC----EEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
Q ss_conf 4222452999874578817999999879975----499962012343010068899999999975299986122334520
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 765 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~----~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
-++-+||++++.||+|+||.||+|.+..+++ .+|+|.+.... .....+.+.+|..+++.+ +||||+++++.+.
T Consensus 5 ~~k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~ 81 (317)
T d1xkka_ 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICL 81 (317)
T ss_dssp ECCTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred CCCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHC-CCCCEEEEEEEEE
T ss_conf 3888999783198208992999999958998898999999965134--979999999999999867-9988815899996
Q ss_pred CCCEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 3880999972478896888970---8999999999999999999999967967358999918986899209
Q 002560 841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~l~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+. ..+++++++.+++|..++. ..+++..++.++.|++.||.|||+++|+||||||+|||++.++++|
T Consensus 82 ~~-~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~k 151 (317)
T d1xkka_ 82 TS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVK 151 (317)
T ss_dssp SS-SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEE
T ss_pred CC-CEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCCEE
T ss_conf 19-83699984268740101113345799999999999999999999876950476212031167998758
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=7e-26 Score=174.30 Aligned_cols=141 Identities=11% Similarity=0.127 Sum_probs=124.7
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEEC-----CCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
Q ss_conf 22245299987457881799999987-----9975499962012343010068899999999975299986122334520
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~-----~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||+|.+. .+++.+|+|++.+... ......+.+|..+++.+.+||+|+++++.+.
T Consensus 20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~ 97 (311)
T d1t46a_ 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (311)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
T ss_conf 77899698549820688299999980664477886999999874248--7799999999999876269998878998983
Q ss_pred CCCEEEEEEECCCCCCHHHHHC-C-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEE
Q ss_conf 3880999972478896888970-8-------------------9999999999999999999999679673589999189
Q 002560 841 DSMHAGLLLNTYLACPLASILH-T-------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900 (908)
Q Consensus 841 ~~~~l~lv~e~~~~g~L~~~l~-~-------------------~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NIL 900 (908)
+...+|++|||+++|+|..++. . .+++..+..++.|++.|+.|||+++++||||||+|||
T Consensus 98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl 177 (311)
T d1t46a_ 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL 177 (311)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred ECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC
T ss_conf 19978999973799879999985356654444453322233458899999999999999999887579266624102100
Q ss_pred ECCCCCCC
Q ss_conf 86899209
Q 002560 901 LDKSGHLQ 908 (908)
Q Consensus 901 id~~g~iK 908 (908)
++..+.+|
T Consensus 178 ~~~~~~~k 185 (311)
T d1t46a_ 178 LTHGRITK 185 (311)
T ss_dssp EETTTEEE
T ss_pred CCCCCCCC
T ss_conf 00257521
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5e-26 Score=175.20 Aligned_cols=141 Identities=13% Similarity=0.171 Sum_probs=124.1
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCC-------CEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 22245299987457881799999987997-------54999620123430100688999999999752999861223345
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSE-------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~-------~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~ 838 (908)
+..++|++++.||+|+||.||+|++..++ ..||+|.+.+... ......+.+|...+..+.+||+|++++++
T Consensus 10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~e~~~l~~~~~HpnIv~~~~~ 87 (299)
T d1fgka_ 10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLGA 87 (299)
T ss_dssp CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCC--HHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 2589969700985167828999998578755566754999999881128--68899999999999981399969734652
Q ss_pred ECCCCEEEEEEECCCCCCHHHHHC------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEE
Q ss_conf 203880999972478896888970------------------89999999999999999999999679673589999189
Q 002560 839 CADSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900 (908)
Q Consensus 839 ~~~~~~l~lv~e~~~~g~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NIL 900 (908)
+.+...+|++|||+.+|+|.+++. ..+++..+..++.|++.||.|||+++|+||||||+|||
T Consensus 88 ~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiL 167 (299)
T d1fgka_ 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 167 (299)
T ss_dssp ECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEE
T ss_conf 20188689999736999099999860677643222334574346799999999999999998766379786302210224
Q ss_pred ECCCCCCC
Q ss_conf 86899209
Q 002560 901 LDKSGHLQ 908 (908)
Q Consensus 901 id~~g~iK 908 (908)
++.+|.+|
T Consensus 168 l~~~~~~k 175 (299)
T d1fgka_ 168 VTEDNVMK 175 (299)
T ss_dssp ECTTCCEE
T ss_pred ECCCCCEE
T ss_conf 54789767
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=7.2e-27 Score=180.41 Aligned_cols=137 Identities=9% Similarity=0.069 Sum_probs=119.5
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE
Q ss_conf 22245299987457881799999987997549996201234301006889999999997529998612233452038809
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l 845 (908)
+..++|++.+.||+|+||.||+++.. ..+|+|++...... ....+.+.+|..++..+ +||||+++++++. ...+
T Consensus 5 i~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~-~~~~ 78 (276)
T d1uwha_ 5 IPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKT-RHVNILLFMGYST-APQL 78 (276)
T ss_dssp CCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCC-TTHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSC
T ss_pred CCCCCEEEEEEEEECCCCEEEEEEEC---CEEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCCCEEEEEEEEE-CCEE
T ss_conf 15451899889830788589999999---98999999734699-89999999999999847-9987864567971-5589
Q ss_pred EEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 99972478896888970---8999999999999999999999967967358999918986899209
Q 002560 846 GLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|++|||+++|+|.+++. .++++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 79 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~K 144 (276)
T d1uwha_ 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144 (276)
T ss_dssp EEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEE
T ss_pred EEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECCCCCEE
T ss_conf 999965899888999852357899999999999999998887509995161478997981899788
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=4.4e-26 Score=175.55 Aligned_cols=140 Identities=13% Similarity=0.162 Sum_probs=122.2
Q ss_pred CCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC-----
Q ss_conf 224529998745788179999998799754999620123430100688999999999752999861223345203-----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD----- 841 (908)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~----- 841 (908)
.+++|++++.||+|+||+||+|.++.+++.||+|++.+.... ......+.+|..+|+.++ |++++.++..+..
T Consensus 8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~-h~nii~~~~~~~~~~~~~ 85 (318)
T d3blha1 8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLK-HENVVNLIEICRTKASPY 85 (318)
T ss_dssp BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT-TSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEC-----
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-HHHHHHHHHHHHHHHHHC-CCCCCCEEEEEECCCCCC
T ss_conf 627988999972274829999999899979999998422246-378999999999999835-999660676540246544
Q ss_pred ---CCEEEEEEECCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf ---880999972478896888970--8999999999999999999999967967358999918986899209
Q 002560 842 ---SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ---~~~l~lv~e~~~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
...+|++||++.++.+..+.. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 86 ~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~k 157 (318)
T d3blha1 86 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLK 157 (318)
T ss_dssp -----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEE
T ss_pred CCCCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEEECCCCCEE
T ss_conf 445763899985357874101222034433089999999999999885229988567672220366899687
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.8e-26 Score=177.88 Aligned_cols=140 Identities=21% Similarity=0.202 Sum_probs=121.7
Q ss_pred CCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCC---HHHHHHHHHHHHHHCC-CCCCCCEEEEEECCCCE
Q ss_conf 4529998745788179999998799754999620123430100---6889999999997529-99861223345203880
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLG---KEVQVLKEKNLMKSVS-PSACVPQILCTCADSMH 844 (908)
Q Consensus 769 ~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~---~~~~i~~E~~il~~l~-~~~~i~~~~~~~~~~~~ 844 (908)
++|++.+.||+|+||.||+|.++.+++.+|+|++.+....... ....+.+|..+++.++ .||||+++++++.+...
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE
T ss_conf 83799679840878399999999999799999985688443345567999999999999743589881279999830996
Q ss_pred EEEEEECCCC-CCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC-CCCC
Q ss_conf 9999724788-96888970--899999999999999999999996796735899991898689-9209
Q 002560 845 AGLLLNTYLA-CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GHLQ 908 (908)
Q Consensus 845 l~lv~e~~~~-g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~-g~iK 908 (908)
+|++||++.+ +++..++. ..+++..++.++.|++.||.|||+++|+||||||+|||++.+ +.+|
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vk 151 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 151 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEE
T ss_pred EEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEE
T ss_conf 89999833686228999861589999999999999999999998779755667611147744788489
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=4.8e-26 Score=175.30 Aligned_cols=136 Identities=10% Similarity=0.094 Sum_probs=120.6
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE
Q ss_conf 22245299987457881799999987997549996201234301006889999999997529998612233452038809
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l 845 (908)
+..++|++.+.||+|+||.||+|.+..+ +.+|+|++..... ..+.+.+|..+++.+ +|+||+++++++.+ ..+
T Consensus 14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~----~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~-~~~ 86 (285)
T d1fmka3 14 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPI 86 (285)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSC
T ss_pred CCHHHEEEEEEEEECCCEEEEEEEECCC-CEEEEEEECCCCC----CHHHHHHHHHHHHHC-CCCCEEEEEEEEEC-CCE
T ss_conf 4779979846993079809999999999-9999999880448----889999999999866-66788689999823-975
Q ss_pred EEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 99972478896888970----8999999999999999999999967967358999918986899209
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|++|||+++|+|..++. ..+++..+..++.|++.||.|||+++|+||||||+|||++.+|.+|
T Consensus 87 ~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~k 153 (285)
T d1fmka3 87 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 153 (285)
T ss_dssp EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEE
T ss_conf 9999944799435420000355305999999999999999987541143353123079998999299
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.2e-26 Score=177.46 Aligned_cols=137 Identities=15% Similarity=0.190 Sum_probs=123.7
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE
Q ss_conf 22245299987457881799999987997549996201234301006889999999997529998612233452038809
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l 845 (908)
+..++|++.+.||+|+||.||+++++ +++.||+|.+.+... ..+.+.+|..++..+ +||||+++++.+.+...+
T Consensus 1 ~~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~ 74 (258)
T d1k2pa_ 1 IDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPI 74 (258)
T ss_dssp CCCCCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS----CHHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSE
T ss_pred CCHHHCEEEEEEECCCCEEEEEEEEC-CCCEEEEEEECCCCC----CHHHHHHHHHHHHHC-CCCCEEEEEEEEEECCCE
T ss_conf 99699799689820788399999988-998999999874757----789999999999966-898601588998507816
Q ss_pred EEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 99972478896888970---8999999999999999999999967967358999918986899209
Q 002560 846 GLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
|++|||+.+|+|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 75 ~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~k 140 (258)
T d1k2pa_ 75 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 140 (258)
T ss_dssp EEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEE
T ss_pred EEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE
T ss_conf 999970489938886410246776899999999999999987546843466541358876998479
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=8.5e-26 Score=173.76 Aligned_cols=131 Identities=13% Similarity=0.158 Sum_probs=115.2
Q ss_pred EEECCCCEEEEEEEEEC--CCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECC
Q ss_conf 87457881799999987--9975499962012343010068899999999975299986122334520388099997247
Q 002560 775 KCLYSTDCSEIGLVLLR--DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 775 ~~lg~G~~g~V~~~~~~--~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~lv~e~~ 852 (908)
+.||+|+||.||+|.+. .+++.+|+|++..... +....+.+.+|..+++.++ ||||+++++++.+. ..|++|||+
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~g~~~~~-~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLD-NPYIVRMIGICEAE-SWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCC-CTTBCCEEEEEESS-SEEEEEECC
T ss_pred CCCCCCCCEEEEEEEECCCCCCEEEEEEEECHHHC-CHHHHHHHHHHHHHHHHCC-CCCCCEEEEEECCC-CEEEEEECC
T ss_conf 78345878299999981697385999999880108-9899999999999998679-98985277775059-779999747
Q ss_pred CCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 8896888970--8999999999999999999999967967358999918986899209
Q 002560 853 LACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 853 ~~g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
++|+|..++. .++++..+..++.|++.||.|||+++|+||||||+|||++..|.+|
T Consensus 90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~k 147 (277)
T d1xbba_ 90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAK 147 (277)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCC
T ss_conf 8896899975225789999999999999997668747955677761131023567512
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.1e-26 Score=175.15 Aligned_cols=141 Identities=11% Similarity=0.044 Sum_probs=124.9
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCC-C--CEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf 2224529998745788179999998799-7--549996201234301006889999999997529998612233452038
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-E--NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t-~--~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
+..+||++.+.||+|+||.||+|.+... + ..||+|++.+.........+.+.+|..++..+ +||||+++++++.+
T Consensus 5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~- 82 (273)
T d1u46a_ 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLT- 82 (273)
T ss_dssp CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS-
T ss_pred ECHHHEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC-CCCCEEEEEEEEEE-
T ss_conf 8648919978980388839999999889990799999999835557989999999999999868-99998789877740-
Q ss_pred CEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 80999972478896888970---8999999999999999999999967967358999918986899209
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~l~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
..++++|||++++++...+. +++++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 83 ~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vk 151 (273)
T d1u46a_ 83 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVK 151 (273)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEE
T ss_pred CCHHEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCCCCCEE
T ss_conf 100114654238612544421268999999999999999999875217875205668881565565433
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.4e-25 Score=172.44 Aligned_cols=141 Identities=11% Similarity=0.105 Sum_probs=120.1
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECC-----CCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
Q ss_conf 222452999874578817999999879-----975499962012343010068899999999975299986122334520
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-----t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ....+.+..|..++..+.+|++|+.++..+.
T Consensus 10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~ 87 (299)
T d1ywna1 10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACT 87 (299)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCC--CHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf 16799798449841678399999986777555783999999860017--1789999999999886149984997411540
Q ss_pred C-CCEEEEEEECCCCCCHHHHHC------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEE
Q ss_conf 3-880999972478896888970------------------899999999999999999999996796735899991898
Q 002560 841 D-SMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901 (908)
Q Consensus 841 ~-~~~l~lv~e~~~~g~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILi 901 (908)
. ...++++||||++|+|.+++. ..+++..+..++.|++.||.|||+++|+||||||+|||+
T Consensus 88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl 167 (299)
T d1ywna1 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 167 (299)
T ss_dssp STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred CCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
T ss_conf 47975799998458992999998536666653222023321468999999999999999998873797178677310657
Q ss_pred CCCCCCC
Q ss_conf 6899209
Q 002560 902 DKSGHLQ 908 (908)
Q Consensus 902 d~~g~iK 908 (908)
+.+|.+|
T Consensus 168 ~~~~~~K 174 (299)
T d1ywna1 168 SEKNVVK 174 (299)
T ss_dssp CGGGCEE
T ss_pred CCCCCEE
T ss_conf 7998289
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.6e-25 Score=172.12 Aligned_cols=139 Identities=13% Similarity=0.180 Sum_probs=120.7
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCC---CEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf 22245299987457881799999987997---549996201234301006889999999997529998612233452038
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSE---NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~---~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
+..++|++.+.||+|+||.||+|.+..++ ..+|+|.+.... .....+.+.+|..+++.+ +||||+++++++. .
T Consensus 4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~ 79 (273)
T d1mp8a_ 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-E 79 (273)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-S
T ss_pred CCHHHEEEEEEEEECCCCEEEEEEEECCCCEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHC-CCCCEEEEEEEEE-C
T ss_conf 68899698779930788299999993699644999999936566--879999999999999868-9999856988995-3
Q ss_pred CEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 80999972478896888970---8999999999999999999999967967358999918986899209
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~l~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
..+|++|||+++|+|..++. .++++..++.++.|++.||.|||+++|+||||||+|||++..+.+|
T Consensus 80 ~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~K 148 (273)
T d1mp8a_ 80 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK 148 (273)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEE
T ss_pred CEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHEEECCCCCEE
T ss_conf 747999984069807765422478999999999999998775230226744141026553206789678
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1e-25 Score=173.20 Aligned_cols=140 Identities=14% Similarity=0.187 Sum_probs=115.0
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCC-CCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCC--CCCCCCEEEEEEC----
Q ss_conf 24529998745788179999998799-7549996201234301006889999999997529--9986122334520----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDS-ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCA---- 840 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t-~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~--~~~~i~~~~~~~~---- 840 (908)
-++|++++.||+|+||.||+|++..+ ++.+|+|++.+..... .....+.+|..+++.++ +||+|+++++.+.
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEHHHCCC-HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
T ss_conf 5897988899215586999999988899899999980232451-679999999999998742589880236632214666
Q ss_pred -CCCEEEEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf -3880999972478896888970---8999999999999999999999967967358999918986899209
Q 002560 841 -DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 -~~~~l~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
....+|++||++.++.+..... ..+++..++.++.|++.||.|||+++|+||||||+|||++..|.+|
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~k 156 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 156 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred CCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCEE
T ss_conf 667469999974058714444430378999899999999999999999758898357986278985899754
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93 E-value=3.2e-25 Score=170.21 Aligned_cols=139 Identities=14% Similarity=0.182 Sum_probs=122.9
Q ss_pred CCCCEEEEEEECCCCEEEEEEEEECC-----CCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
Q ss_conf 22452999874578817999999879-----9754999620123430100688999999999752999861223345203
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..++|++.+.||+|+||.||+|+++. ++..||+|++.... .....+.+.+|..+++.+ +|+|++.+++++.+
T Consensus 11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~ 87 (301)
T d1lufa_ 11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGVCAV 87 (301)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECS
T ss_pred CHHHCEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECHHC--CHHHHHHHHHHHHHHHHC-CCCCCCCCEEEECC
T ss_conf 988938867982078839999998887657788299999988210--857999999999999966-89976552466605
Q ss_pred CCEEEEEEECCCCCCHHHHHC--------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf 880999972478896888970--------------------------899999999999999999999996796735899
Q 002560 842 SMHAGLLLNTYLACPLASILH--------------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVS 895 (908)
Q Consensus 842 ~~~l~lv~e~~~~g~L~~~l~--------------------------~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDik 895 (908)
...++++||++++|+|.+++. ..+++..+..++.|++.||.|||+++|+|||||
T Consensus 88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlK 167 (301)
T d1lufa_ 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA 167 (301)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 98038999815899299999852755421000011100121034678898999999999999998554135786854884
Q ss_pred CCCEEECCCCCCC
Q ss_conf 9918986899209
Q 002560 896 PDVLMLDKSGHLQ 908 (908)
Q Consensus 896 p~NILid~~g~iK 908 (908)
|+|||++.++.+|
T Consensus 168 p~NILld~~~~~K 180 (301)
T d1lufa_ 168 TRNCLVGENMVVK 180 (301)
T ss_dssp GGGEEECGGGCEE
T ss_pred CCCEEECCCCCEE
T ss_conf 0116898999289
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.3e-25 Score=172.71 Aligned_cols=135 Identities=13% Similarity=0.160 Sum_probs=120.4
Q ss_pred CCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC-CCE
Q ss_conf 2224529998745788179999998799754999620123430100688999999999752999861223345203-880
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-SMH 844 (908)
Q Consensus 766 ~~~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~-~~~ 844 (908)
++.++|++.+.||+|+||.||+|.++ +..+|+|++++.. ..+.+.+|..+++.+ +||||+++++.+.+ ...
T Consensus 4 i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~ 75 (262)
T d1byga_ 4 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGG 75 (262)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC-------HHHHHTHHHHTTC-CCTTBCCEEEEECCC--C
T ss_pred CCHHHEEEEEEEECCCCEEEEEEEEC--CEEEEEEEECCHH-----HHHHHHHHHHHHHHC-CCCCEEEEEEEEEECCCC
T ss_conf 57899488579820798089999999--9099999988577-----799999999999867-898985498788723892
Q ss_pred EEEEEECCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 999972478896888970----8999999999999999999999967967358999918986899209
Q 002560 845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 l~lv~e~~~~g~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+|++|||+++|+|.+++. ..+++..++.++.|++.||.|||+++|+||||||+|||++.+|.+|
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~k 143 (262)
T d1byga_ 76 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK 143 (262)
T ss_dssp CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEE
T ss_pred EEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHEECCCCCEE
T ss_conf 89999636999899998745788889999999999998523211337655366656760146899776
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.92 E-value=1.3e-24 Score=166.48 Aligned_cols=129 Identities=13% Similarity=0.230 Sum_probs=115.9
Q ss_pred CCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEE
Q ss_conf 45299987457881799999987997549996201234301006889999999997529998612233452038809999
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~lv 848 (908)
+.|++.+.||+|+||.||+|+++.+++.+|+|++.+... ...+..|..++..+.++++++.++..+......|++
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~v 79 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 79 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCC-----CHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE
T ss_conf 806997998417882999999988997999999750258-----299999999999964899987799996018811799
Q ss_pred EECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 72478896888970---89999999999999999999999679673589999189868
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 849 ~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~ 903 (908)
||++ +++|..++. ..++...+..++.|++.||.|||++||+||||||+|||++.
T Consensus 80 me~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~ 136 (293)
T d1csna_ 80 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGR 136 (293)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECC
T ss_pred EEEC-CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
T ss_conf 9964-88879999752031106899999999999999999779662667713152347
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.2e-24 Score=166.67 Aligned_cols=141 Identities=13% Similarity=0.165 Sum_probs=123.4
Q ss_pred CCCCCCEEEEEEECCCCEEEEEEEEECC-----CCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 4222452999874578817999999879-----97549996201234301006889999999997529998612233452
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 765 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.+..++|++.+.||+|+||.||+|.+.. ++..||+|++.+.. .......+.+|..+++.+. ||+|+++++.+
T Consensus 16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~ 92 (308)
T d1p4oa_ 16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVV 92 (308)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCC-CTTBCCEEEEE
T ss_pred EECHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECCCC--CHHHHHHHHHHHHHHHHCC-CCCEEEEEEEE
T ss_conf 42689918835982078818999998786447789689999987012--8689999999999999769-99884125478
Q ss_pred CCCCEEEEEEECCCCCCHHHHHC------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCC
Q ss_conf 03880999972478896888970------------899999999999999999999996796735899991898689920
Q 002560 840 ADSMHAGLLLNTYLACPLASILH------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 840 ~~~~~l~lv~e~~~~g~L~~~l~------------~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~i 907 (908)
.....++++||++++|+|..++. ..++......++.+++.||.|||+++|+||||||+|||++.++++
T Consensus 93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~ 172 (308)
T d1p4oa_ 93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 172 (308)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred ECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEECCCCEEECCCCEE
T ss_conf 42881067776048998899987503321134446887999999999999999998764796543286775403599649
Q ss_pred C
Q ss_conf 9
Q 002560 908 Q 908 (908)
Q Consensus 908 K 908 (908)
|
T Consensus 173 K 173 (308)
T d1p4oa_ 173 K 173 (308)
T ss_dssp E
T ss_pred E
T ss_conf 9
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.92 E-value=2.4e-24 Score=164.75 Aligned_cols=133 Identities=14% Similarity=0.171 Sum_probs=113.3
Q ss_pred CCC-CEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE
Q ss_conf 224-5299987457881799999987997549996201234301006889999999997529998612233452038809
Q 002560 767 SLT-DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 767 ~~~-~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l 845 (908)
.+. .|++.+.||+|+||.||+|.+..+++.||+|++..... ...+..|..+++.+.+|++++.+...+.+....
T Consensus 4 ~vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~ 78 (299)
T d1ckia_ 4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 78 (299)
T ss_dssp EETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEE
T ss_pred EECCEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEECHHCC-----CHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEE
T ss_conf 188889996898507880999999988998999999721005-----888999999999703899601799999519877
Q ss_pred EEEEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 99972478896888970---8999999999999999999999967967358999918986899
Q 002560 846 GLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 846 ~lv~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g 905 (908)
+++||++ ++++...+. ..+++..+..++.|++.||+|||++||+||||||+|||++..+
T Consensus 79 ~ivme~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~ 140 (299)
T d1ckia_ 79 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 140 (299)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG
T ss_pred EEEEEEC-CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCC
T ss_conf 8999873-8713332443068876899999999999999999979944266787660643357
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=8.7e-24 Score=161.32 Aligned_cols=134 Identities=16% Similarity=0.142 Sum_probs=115.0
Q ss_pred EEEEEECCCCEEEEEEEEECCCC---CEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC-CCEEEE
Q ss_conf 99987457881799999987997---54999620123430100688999999999752999861223345203-880999
Q 002560 772 EWRKCLYSTDCSEIGLVLLRDSE---NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-SMHAGL 847 (908)
Q Consensus 772 ~~~~~lg~G~~g~V~~~~~~~t~---~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~-~~~l~l 847 (908)
++.+.||+|+||+||++.+..++ ..+|+|.+.+.. .....+.+.+|..++..++ ||||+++++++.. ...+++
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~l 106 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLV 106 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCC--CHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEETTTEEEE
T ss_pred CCCEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCC--CHHHHHHHHHHHHHHHHCC-CCCEEEEEEEEEECCCCEEE
T ss_conf 26669813688099999997799879999999988436--9789999999999998678-99986786789806994389
Q ss_pred EEECCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCC
Q ss_conf 972478896888970---8999999999999999999999967967358999918986899209
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~~g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g~iK 908 (908)
+|||+.+++|..++. ..+++..+..++.|++.||.|+|+++|+||||||+|||++..+.+|
T Consensus 107 v~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~k 170 (311)
T d1r0pa_ 107 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVK 170 (311)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEE
T ss_pred EEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCEE
T ss_conf 9987406741442101345404899999999988765200336762577668757677999889
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.4e-23 Score=159.97 Aligned_cols=131 Identities=13% Similarity=0.123 Sum_probs=112.0
Q ss_pred CCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHH--HCCCCCCCCEEEEEECCC----
Q ss_conf 45299987457881799999987997549996201234301006889999999997--529998612233452038----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK--SVSPSACVPQILCTCADS---- 842 (908)
Q Consensus 769 ~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~--~l~~~~~i~~~~~~~~~~---- 842 (908)
++|.+.+.||+|+||.||+|++ +++.||+|++.... .+....|.+++. .+ +||||+++++.+.+.
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~------~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~ 73 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE------ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSS
T ss_pred CEEEEEEEEEECCCEEEEEEEE--CCEEEEEEEECCCC------HHHHHHHHHHHHHHHC-CCCCCCCEEEEEEECCCCC
T ss_conf 6899988982078819999999--99899999987200------4679999999999627-9986832688998379860
Q ss_pred CEEEEEEECCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHH--------CCCEECCCCCCCEEECCCCCCC
Q ss_conf 80999972478896888970-899999999999999999999996--------7967358999918986899209
Q 002560 843 MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHK--------RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~l~lv~e~~~~g~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~--------~giiHrDikp~NILid~~g~iK 908 (908)
..+|++|||+++|+|..+++ .++++.....++.+++.|+.|+|+ ++|+||||||+|||++.+|.+|
T Consensus 74 ~~~~lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~K 148 (303)
T d1vjya_ 74 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred EEEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCEE
T ss_conf 489999964669898999865899989999999999999999887665204689866153173135786887768
|
| >d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.90 E-value=4.3e-22 Score=150.78 Aligned_cols=133 Identities=35% Similarity=0.590 Sum_probs=119.5
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCC
Q ss_conf 43468989999999997239133389999999995325599965898899088868939999986999999515667643
Q 002560 459 SAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEV 538 (908)
Q Consensus 459 ~~~~kt~e~~~~~~~~l~~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~ 538 (908)
-.|+|+.++++.+.+.|+++++|++|+++++..|+..++.+.|++|++|+++||.++.+|||.+|.|+++....++ +..
T Consensus 2 ~~~~kt~~~~~~l~~~l~~~~~F~~l~~~~~~~l~~~~~~~~~~~g~~I~~~G~~~~~~y~I~~G~v~v~~~~~~~-~~~ 80 (136)
T d1cx4a1 2 IIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGV-GRC 80 (136)
T ss_dssp CCCCCCHHHHHHHHHHHTTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEEEETTE-EEE
T ss_pred CCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCEEEEEECCCCEEEECCCCCHHHHHHHHHEEEEEECCCCC-EEE
T ss_conf 6626999999999999968983545999999998445599998999999979982214554131226773046544-165
Q ss_pred CEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHH
Q ss_conf 44887650588991201222059984119998346479998188899987444666989
Q 002560 539 PRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 539 ~~~~~~~~~~~G~~fGe~all~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~~~ 597 (908)
+..+++|++||+++++.+.|++++++|.++|.+|.|++++|.+++.+++...+.
T Consensus 81 -----~~~l~~g~~fg~~~l~~~~~~~~s~~a~~~~~~~~i~~~~f~~ll~~~~~~~r~ 134 (136)
T d1cx4a1 81 -----VGNYDNRGSFGELALMYNTPRAATITATSPGALWGLDRVTFRRIIVKNNAKKRK 134 (136)
T ss_dssp -----EEEEESSCEECHHHHHHCCCCCSEEEESSCEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred -----EECCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_conf -----210377532032787389960379998778899998599999999869999986
|
| >d1ne6a1 b.82.3.2 (A:109-244) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.87 E-value=3.7e-21 Score=145.05 Aligned_cols=129 Identities=36% Similarity=0.599 Sum_probs=116.3
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCC
Q ss_conf 43468989999999997239133389999999995325599965898899088868939999986999999515667643
Q 002560 459 SAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEV 538 (908)
Q Consensus 459 ~~~~kt~e~~~~~~~~l~~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~ 538 (908)
.+.+|..+..+.+.++|+++++|++|+++++..|+..+..+.|++|++|+++||.++.+|||++|.+.++....
T Consensus 6 ~~~~~~~~~~~~l~~~l~~~~lF~~l~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~yiI~~G~v~v~~~~~------ 79 (136)
T d1ne6a1 6 KVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE------ 79 (136)
T ss_dssp CCCCCCHHHHHHHHHHHHHCGGGTSCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEETTE------
T ss_pred CCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEECCCCEEEECCCC------
T ss_conf 16999999999999999679705529999999984646999989999999599984112552589541403310------
Q ss_pred CEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHH
Q ss_conf 44887650588991201222059984119998346479998188899987444666989
Q 002560 539 PRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 539 ~~~~~~~~~~~G~~fGe~all~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~~~ 597 (908)
.+. .+++|++|||++++.+.|+++|++|.++|.+|.|++++|..++.+++..++.
T Consensus 80 --~~~--~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~f~~ll~~~~~~~r~ 134 (136)
T d1ne6a1 80 --WAT--SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRK 134 (136)
T ss_dssp --EEE--EECTTCEECCHHHHHCCCCCSEEEESSCEEEEEEEHHHHHHHTHHHHHHHHH
T ss_pred --CCC--EECCCCCCCCHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_conf --110--2135563250998299961279999149899999899999998009999996
|
| >d1o7fa2 b.82.3.2 (A:13-167) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory domain of Epac2, domains 1 and 3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=2e-20 Score=140.47 Aligned_cols=135 Identities=19% Similarity=0.284 Sum_probs=119.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCC
Q ss_conf 86434689899999999972391333899999999953255999658988990888689399999869999995156676
Q 002560 457 SSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNG 536 (908)
Q Consensus 457 ~~~~~~kt~e~~~~~~~~l~~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~ 536 (908)
...+..|+.++.+.+..+|+++++|+.++++++..|+..+..+.|++|++|+++||.++.+|+|++|.+.++.....+..
T Consensus 8 ~k~p~~Rt~~~~~~i~~~L~~~~~F~~l~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~y~I~~G~v~v~~~~~~~~~ 87 (155)
T d1o7fa2 8 DKRPLERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQ 87 (155)
T ss_dssp TSCSTTCCHHHHHHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGG
T ss_pred CCCHHHCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCEEEEEEECCCHHEEEECCCCCC
T ss_conf 68923489999999999995998574699999999997369999799998873898050568885021110120121222
Q ss_pred CCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHH
Q ss_conf 43448876505889912012220599841199983464799981888999874446669
Q 002560 537 EVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNL 595 (908)
Q Consensus 537 ~~~~~~~~~~~~~G~~fGe~all~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~ 595 (908)
.. ..+..+++|++||| +++.+.||+++++|.++|.++.|++++|..++.+++...
T Consensus 88 ~~---~~v~~l~~g~~fGe-~~l~~~~~~~tv~a~~~~~l~~i~~~~f~~il~~~~~~~ 142 (155)
T d1o7fa2 88 DA---VTICTLGIGTAFGE-SILDNTPRHATIVTRESSELLRIEQEDFKALWEKYRQYM 142 (155)
T ss_dssp GC---EEEEEECTTCEECG-GGGGTCBCSSEEEESSSEEEEEEEHHHHHHHHHHHGGGT
T ss_pred CC---CCCCCCCCCCCCHH-HHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHH
T ss_conf 33---33223445321204-553499734899987977999981999999998799999
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=1.4e-20 Score=141.42 Aligned_cols=133 Identities=11% Similarity=0.095 Sum_probs=104.9
Q ss_pred CEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCC----------CCCCCCEEEEEE
Q ss_conf 5299987457881799999987997549996201234301006889999999997529----------998612233452
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS----------PSACVPQILCTC 839 (908)
Q Consensus 770 ~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~----------~~~~i~~~~~~~ 839 (908)
.|++++.||+|+||+||+|+++.+++.||+|++.+... ..+.+.+|..+++.+. .|++|++++..+
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~----~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~ 89 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV----YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 89 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCC----CHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEE
T ss_conf 57998997507781899999999997999999834313----36899999999998401455555422767647899876
Q ss_pred CC--CCEEEEEEECCCCCCHHHH-HC----CCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCCEEECCCCC
Q ss_conf 03--8809999724788968889-70----899999999999999999999996-79673589999189868992
Q 002560 840 AD--SMHAGLLLNTYLACPLASI-LH----TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 840 ~~--~~~l~lv~e~~~~g~L~~~-l~----~~l~~~~~~~~~~qi~~aL~~LH~-~giiHrDikp~NILid~~g~ 906 (908)
.. ....++++.++..+..... .. ..+++..++.++.|++.||.|||+ +||+||||||+|||++..|.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~ 164 (362)
T d1q8ya_ 90 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS 164 (362)
T ss_dssp EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEET
T ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCC
T ss_conf 312565202343200035420000012234678689999999999999888764058646567705705630576
|
| >d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.83 E-value=1.9e-19 Score=134.40 Aligned_cols=122 Identities=23% Similarity=0.313 Sum_probs=107.7
Q ss_pred HHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCC-CCEEEEEEECCCCC
Q ss_conf 99723913338999999999532559996589889908886893999998699999951566764-34488765058899
Q 002560 473 RALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGE-VPRVLQRYTAEKLS 551 (908)
Q Consensus 473 ~~l~~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~-~~~~~~~~~~~~G~ 551 (908)
++|+++|+|++|+++++..|+..+..+.|++|++|+++||.++.+|+|++|.|+++....++... ......+..+++|+
T Consensus 2 ~~l~~~p~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~v~~~~~~~~~~~~~~~~~i~~~~~g~ 81 (147)
T d1cx4a2 2 SFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKGKSDIEENGAVEIARCLRGQ 81 (147)
T ss_dssp HHHHTCGGGTTSCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEEEEEEEEEEC--------CCEEEEEEECTTC
T ss_pred HHHHCCHHHCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEEEECCCCC
T ss_conf 34845971507999999999975899998999999948988860289841168999965897432333103563046886
Q ss_pred CCHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHH
Q ss_conf 1201222059984119998346479998188899987444666
Q 002560 552 SFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN 594 (908)
Q Consensus 552 ~fGe~all~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~ 594 (908)
+|||.+++.+.|+.+|++|.++|++|.|++++|..++.+.+..
T Consensus 82 ~fGe~~~~~~~~~~~t~~a~~~~~~~~i~~~~f~~ll~~~~~i 124 (147)
T d1cx4a2 82 YFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEI 124 (147)
T ss_dssp EESCHHHHHTCCCSSEEEEEEEEEEEEEEHHHHHHHCGGGHHH
T ss_pred EEEEHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHH
T ss_conf 8663443489971579998878799999899999998779999
|
| >d1ne6a2 b.82.3.2 (A:245-376) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.82 E-value=3.5e-19 Score=132.80 Aligned_cols=118 Identities=25% Similarity=0.308 Sum_probs=107.6
Q ss_pred HHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCC
Q ss_conf 99723913338999999999532559996589889908886893999998699999951566764344887650588991
Q 002560 473 RALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS 552 (908)
Q Consensus 473 ~~l~~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~G~~ 552 (908)
++|+++|+|++|+++++..|+..++.+.|++|++|+++||.++++|+|.+|.|+++....++.+.. ....+++|++
T Consensus 2 ~~L~~i~~f~~L~~~~~~~l~~~~~~~~~~~g~~I~~~Gd~~~~~yii~~G~v~~~~~~~~~~~~~----~~~~~~~g~~ 77 (132)
T d1ne6a2 2 EFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFV----EVGRLGPSDY 77 (132)
T ss_dssp HHHHTSGGGGGSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECCEEEEEESSSSCCEE----EEEEECTTCE
T ss_pred HHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCHHHHHHHHHHHEEECCCCCCCCCH----HHHHCCCCCE
T ss_conf 459679826379999999999838999989999999869862378888763311201477544201----2321023426
Q ss_pred CHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHH
Q ss_conf 201222059984119998346479998188899987444666
Q 002560 553 FGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN 594 (908)
Q Consensus 553 fGe~all~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~ 594 (908)
||+.+++.+.+++++++|.++|.++.|++++|.+++.+++..
T Consensus 78 fG~~~~~~~~~~~~t~~a~~~~~~~~i~~~~~~~ll~~~p~~ 119 (132)
T d1ne6a2 78 FGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDI 119 (132)
T ss_dssp ECHHHHHHTSSCSSEEEESSCEEEEEEEHHHHHHHTGGGHHH
T ss_pred EEEEEECCCCCEEEEEEECCCEEEEEEEHHHHHHHHHHCHHH
T ss_conf 357540489824689999311899998799999999879999
|
| >d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory domain of Epac2, domains 1 and 3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=4.6e-19 Score=132.06 Aligned_cols=121 Identities=22% Similarity=0.292 Sum_probs=106.7
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEE-CCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEE
Q ss_conf 98999999999723913338999999999532559996-58988990888689399999869999995156676434488
Q 002560 464 TWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVL 542 (908)
Q Consensus 464 t~e~~~~~~~~l~~~~lf~~L~~~~~~~l~~~~~~~~~-~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~ 542 (908)
|.++.+.+.+.|+++|+|++|+++.+.+|+..+..+.| ++|++|+++||.++.+|||.+|.|.++..+..
T Consensus 1 t~~d~~~i~~~L~~~~~F~~l~~~~l~~l~~~~~~~~~~~~ge~I~~~gd~~~~lyii~~G~v~~~~~~~~--------- 71 (124)
T d1o7fa3 1 TVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKG--------- 71 (124)
T ss_dssp CHHHHHHHHHHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEETTTE---------
T ss_pred CHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCCEEEECCCCCCEEEEEECCEEEEEEEEEE---------
T ss_conf 97899999999848970536999999999840859998289989997999476689997046999975200---------
Q ss_pred EEEECCCCCCCHHHHHHCCCCCEEEEEECCC-EEEEEEEHHHHHHHHHHHHH
Q ss_conf 7650588991201222059984119998346-47999818889998744466
Q 002560 543 QRYTAEKLSSFGELALMYNKPLQASVRAVTN-GMLWALKREDFRGILMSEFS 593 (908)
Q Consensus 543 ~~~~~~~G~~fGe~all~~~~r~atv~A~~~-~~l~~i~r~~f~~il~~~~~ 593 (908)
.....++|++|||.+++.+.||++|++|.++ |.+|.|++++|..++.+.+.
T Consensus 72 ~~~~~~~G~~fGe~~ll~~~~r~~t~~a~~~~~~l~~i~~~~f~~il~~~~~ 123 (124)
T d1o7fa3 72 VVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEA 123 (124)
T ss_dssp EEEEEETTCEECGGGGTCCSCCSSEEEESSSSEEEEEEEHHHHHHHHHHTTC
T ss_pred ECCCCCCCCCHHHHHHHCCCCEEEEEEEEECCEEEEEECHHHHHHHHHHCCC
T ss_conf 0022457840056676179960668999937689999869999999866369
|
| >d1zyba2 b.82.3.2 (A:1-147) Probable transcription regulator BT4300, N-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Probable transcription regulator BT4300, N-terminal domain species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.79 E-value=2.5e-18 Score=127.44 Aligned_cols=124 Identities=16% Similarity=0.094 Sum_probs=109.8
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHCC--EEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEE
Q ss_conf 99999997239133389999999995325--5999658988990888689399999869999995156676434488765
Q 002560 468 EAHIERALHDHFLFRKLTDSQCHVLLDCM--QRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRY 545 (908)
Q Consensus 468 ~~~~~~~l~~~~lf~~L~~~~~~~l~~~~--~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~ 545 (908)
++.+.+.|.++|+|++++++++..|++.+ ..+.|++|++|+++|++++.+|+|++|.++++....+|++.....+
T Consensus 1 m~~~~d~L~~~~lF~~l~~~~~~~ll~~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~v~~~~~~g~~~~~~~~--- 77 (147)
T d1zyba2 1 METMFDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQI--- 77 (147)
T ss_dssp HHHHHTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEE---
T ss_pred CHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCEEEEEEC---
T ss_conf 96699999679060269999999998518608999889989873157763889982113999997489978999974---
Q ss_pred ECCCCCCCHHHHHHCCCCC-EEEEEECCCEEEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 0588991201222059984-11999834647999818889998744466698
Q 002560 546 TAEKLSSFGELALMYNKPL-QASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 546 ~~~~G~~fGe~all~~~~r-~atv~A~~~~~l~~i~r~~f~~il~~~~~~~~ 596 (908)
++|++|||.+++.+.++ ++++.|.++|.++.|++..|.+++.++|....
T Consensus 78 --~~g~~fGe~~~~~~~~~~~~~v~a~~~~~vl~i~~~~~~~~~~~~p~~~~ 127 (147)
T d1zyba2 78 --EAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCISKAFVLSDLFRYDIFRL 127 (147)
T ss_dssp --ESSEEECGGGGSSSCCBCSSEEEESSCEEEEEEEHHHHHHTGGGSHHHHH
T ss_pred --CCCCEECCCHHHCCCCCCCCEEEECCEEEEEEHHHHHHHHHHHHCHHHHH
T ss_conf --89988010022112345533034122033331239999999987999999
|
| >d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.78 E-value=3e-19 Score=133.15 Aligned_cols=130 Identities=21% Similarity=0.419 Sum_probs=115.3
Q ss_pred HHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99551510004889999999975232312789899976887785999993089999805632322213434577546678
Q 002560 599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDG 678 (908)
Q Consensus 599 ~~L~~~~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (908)
.||+++|+|+.++..++.+++..++.+.|++|++|+++|+.++.+|+|.+|.|+++..... +...
T Consensus 2 ~~l~~~p~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~v~~~~~~---------------~~~~ 66 (147)
T d1cx4a2 2 SFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKG---------------KSDI 66 (147)
T ss_dssp HHHHTCGGGTTSCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEEEEEEEEEEC---------------------
T ss_pred HHHHCCHHHCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEECCEEEEEEECCC---------------CCCC
T ss_conf 3484597150799999999997589999899999994898886028984116899996589---------------7432
Q ss_pred CCCCCEEEEECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87652024674899800101110458565168630855999962333222237643334456587
Q 002560 679 TQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNS 743 (908)
Q Consensus 679 ~~~~~~~~~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~~~~~~ 743 (908)
..+....+..+++|++|||.+++.+.++.++++|.++|+++.|++++|.+++++.++++++....
T Consensus 67 ~~~~~~~i~~~~~g~~fGe~~~~~~~~~~~t~~a~~~~~~~~i~~~~f~~ll~~~~~i~~~~~~~ 131 (147)
T d1cx4a2 67 EENGAVEIARCLRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIAT 131 (147)
T ss_dssp --CCEEEEEEECTTCEESCHHHHHTCCCSSEEEEEEEEEEEEEEHHHHHHHCGGGHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHHHHHH
T ss_conf 33310356304688686634434899715799988787999998999999987799999999999
|
| >d1ne6a2 b.82.3.2 (A:245-376) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.78 E-value=7.7e-19 Score=130.66 Aligned_cols=125 Identities=26% Similarity=0.376 Sum_probs=113.4
Q ss_pred HHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99551510004889999999975232312789899976887785999993089999805632322213434577546678
Q 002560 599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDG 678 (908)
Q Consensus 599 ~~L~~~~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (908)
.||+++++|+.++..++..++..++...|++|++|+++|++++.+|+|.+|.|+++....
T Consensus 2 ~~L~~i~~f~~L~~~~~~~l~~~~~~~~~~~g~~I~~~Gd~~~~~yii~~G~v~~~~~~~-------------------- 61 (132)
T d1ne6a2 2 EFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRS-------------------- 61 (132)
T ss_dssp HHHHTSGGGGGSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECCEEEEEESS--------------------
T ss_pred HHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCHHHHHHHHHHHEEECCCC--------------------
T ss_conf 459679826379999999999838999989999999869862378888763311201477--------------------
Q ss_pred CCCCCEEEEECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87652024674899800101110458565168630855999962333222237643334456587
Q 002560 679 TQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNS 743 (908)
Q Consensus 679 ~~~~~~~~~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~~~~~~ 743 (908)
.......+..+++|++||+.+++.+.++.++++|.++++++.|++++|.+++...++++.+..+.
T Consensus 62 ~~~~~~~~~~~~~g~~fG~~~~~~~~~~~~t~~a~~~~~~~~i~~~~~~~ll~~~p~~~~~~i~~ 126 (132)
T d1ne6a2 62 ENEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILKRNIQQ 126 (132)
T ss_dssp SSCCEEEEEEECTTCEECHHHHHHTSSCSSEEEESSCEEEEEEEHHHHHHHTGGGHHHHHHGGGG
T ss_pred CCCCCHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHHHHHH
T ss_conf 54420123210234263575404898246899993118999987999999998799999999999
|
| >d1q3ea_ b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: HCN pacemaker channel species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.78 E-value=3e-18 Score=126.98 Aligned_cols=121 Identities=21% Similarity=0.292 Sum_probs=107.4
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEC
Q ss_conf 99999997239133389999999995325599965898899088868939999986999999515667643448876505
Q 002560 468 EAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTA 547 (908)
Q Consensus 468 ~~~~~~~l~~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~ 547 (908)
......+|+++|+|+++++..+..|+..+..+.|.+|++|+++|+.++.+|||.+|.|.++..+. . . ..+
T Consensus 63 ~~~~~~~l~~~~~F~~~~~~~l~~l~~~~~~~~~~~g~~I~~~g~~~~~ly~i~~G~v~v~~~~~--~---~-----~~l 132 (193)
T d1q3ea_ 63 NFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGN--K---E-----MKL 132 (193)
T ss_dssp HHHTHHHHHHCHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEC-CC--C---E-----EEE
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEEEEEEECCCC--C---E-----EEE
T ss_conf 99999998202477761299999999997887622684310358877500575120577621786--2---1-----465
Q ss_pred CCCCCCHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHH
Q ss_conf 889912012220599841199983464799981888999874446669899
Q 002560 548 EKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSL 598 (908)
Q Consensus 548 ~~G~~fGe~all~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~~~~ 598 (908)
++|++|||.+++.+.+++++++|.++|.+|.|++++|..++...|.....+
T Consensus 133 ~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~l~~~~f~~ll~~~p~~~~~~ 183 (193)
T d1q3ea_ 133 SDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAF 183 (193)
T ss_dssp CTTCEECHHHHHHCSBCSSEEEESSCEEEEEEEHHHHHHHHHHSGGGHHHH
T ss_pred CCCEEEEEEECCCCCCCCCCCEECCCEEEEEEEHHHHHHHHHHCHHHHHHH
T ss_conf 065365542024777421242245746999976999999998799999999
|
| >d1o7fa2 b.82.3.2 (A:13-167) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory domain of Epac2, domains 1 and 3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.77 E-value=1.5e-18 Score=128.89 Aligned_cols=138 Identities=12% Similarity=0.119 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHH------HHHHHHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEEC
Q ss_conf 899987444666------98999955151000488999999997523231278989997688778599999308999980
Q 002560 583 DFRGILMSEFSN------LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFD 656 (908)
Q Consensus 583 ~f~~il~~~~~~------~~~~~~L~~~~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~ 656 (908)
.+..+|.+.|.. .....+|++.++|+.++...+.+++..+..+.|++|+.|+++|+.++++|+|.+|.|.+...
T Consensus 2 ~~i~~L~k~p~~Rt~~~~~~i~~~L~~~~~F~~l~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~y~I~~G~v~v~~~ 81 (155)
T d1o7fa2 2 EWIACLDKRPLERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVS 81 (155)
T ss_dssp HHHHHHTSCSTTCCHHHHHHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEC
T ss_pred HHHHHHCCCHHHCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCEEEEEEECCCHHEEEE
T ss_conf 46898568923489999999999995998574699999999997369999799998873898050568885021110120
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 56323222134345775466788765202467489980010111045856516863085599996233322223764333
Q 002560 657 ADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736 (908)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~ 736 (908)
.. ...+....+..+++|++||| +++.+.+|+++++|.+++.++.|++++|.+++...+++
T Consensus 82 ~~-------------------~~~~~~~~v~~l~~g~~fGe-~~l~~~~~~~tv~a~~~~~l~~i~~~~f~~il~~~~~~ 141 (155)
T d1o7fa2 82 ET-------------------SSHQDAVTICTLGIGTAFGE-SILDNTPRHATIVTRESSELLRIEQEDFKALWEKYRQY 141 (155)
T ss_dssp SS-------------------SCGGGCEEEEEECTTCEECG-GGGGTCBCSSEEEESSSEEEEEEEHHHHHHHHHHHGGG
T ss_pred CC-------------------CCCCCCCCCCCCCCCCCCHH-HHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHH
T ss_conf 12-------------------12223333223445321204-55349973489998797799998199999999879999
Q ss_pred CCCC
Q ss_conf 4456
Q 002560 737 SHDD 740 (908)
Q Consensus 737 ~~~~ 740 (908)
+..=
T Consensus 142 ~~~l 145 (155)
T d1o7fa2 142 MAGL 145 (155)
T ss_dssp TTTT
T ss_pred HHHH
T ss_conf 9999
|
| >d1vp6a_ b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Putative ion channel CnbD species: Mesorhizobium loti [TaxId: 381]
Probab=99.76 E-value=8e-18 Score=124.34 Aligned_cols=116 Identities=25% Similarity=0.302 Sum_probs=105.3
Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCC
Q ss_conf 99999723913338999999999532559996589889908886893999998699999951566764344887650588
Q 002560 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEK 549 (908)
Q Consensus 470 ~~~~~l~~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~ 549 (908)
...++|+++|+|+.++++++..|+..+..+.|++|++|+++|+.++.+|+|++|.++++..+. ..+ ++
T Consensus 8 ~~~~~l~~~p~F~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~I~~G~v~v~~~~~-------~~l-----~~ 75 (133)
T d1vp6a_ 8 RNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNP-------VEL-----GP 75 (133)
T ss_dssp HHHHHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSSC-------EEE-----CT
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCCCEEEECCCCEEEEEEE-------EEE-----CC
T ss_conf 899999789752469999999999738899989999999399987653443035527999642-------134-----15
Q ss_pred CCCCHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHH
Q ss_conf 991201222059984119998346479998188899987444666989
Q 002560 550 LSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 550 G~~fGe~all~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~~~ 597 (908)
|++||+.+++.+.|+.++++|.++|.+|.|++++|..++.++|.....
T Consensus 76 G~~~G~~~~l~~~~~~~~~~a~~~~~i~~i~~~~~~~l~~~~p~~~~~ 123 (133)
T d1vp6a_ 76 GAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEI 123 (133)
T ss_dssp TCEECHHHHHHCCCCSSCEEESSSEEEEEEEHHHHHHHHHHCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_conf 753222214699851466998987799998699999999709999999
|
| >d1wgpa_ b.82.3.2 (A:) Probable cyclic nucleotide-gated ion channel 6 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Probable cyclic nucleotide-gated ion channel 6 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.76 E-value=1.9e-18 Score=128.17 Aligned_cols=116 Identities=14% Similarity=0.182 Sum_probs=97.7
Q ss_pred HHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCC
Q ss_conf 99723913338999999999532559996589889908886893999998699999951566764344887650588991
Q 002560 473 RALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS 552 (908)
Q Consensus 473 ~~l~~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~G~~ 552 (908)
..|+++|+|++|+++.+..|+..++.+.|++|++|+++||.++.+|||.+|.|+++....++.... ....+++|++
T Consensus 6 s~l~~vp~F~~l~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~ly~i~~G~v~~~~~~~~~~~~~----~~~~l~~G~~ 81 (137)
T d1wgpa_ 6 SGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFY----NRSLLKEGDF 81 (137)
T ss_dssp CSCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEECCSSCSSSSS----CEEECCTTCB
T ss_pred HHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEHHCCCCEEEEEECCCCCEEE----EEEECCCCCE
T ss_conf 898779947179999999999855999979999998513355200000137469999649985034----4310447868
Q ss_pred CHHHHHHC---------CCCCEEEEEECCCEEEEEEEHHHHHHHHHHHH
Q ss_conf 20122205---------99841199983464799981888999874446
Q 002560 553 FGELALMY---------NKPLQASVRAVTNGMLWALKREDFRGILMSEF 592 (908)
Q Consensus 553 fGe~all~---------~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~ 592 (908)
|||++|+. ..+|++||+|.++|.+|.|++++|+.++.+.+
T Consensus 82 fGE~~ll~~~~~~~~~~~~~r~~tv~a~t~~~l~~L~~~dl~~il~~~~ 130 (137)
T d1wgpa_ 82 CGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFR 130 (137)
T ss_dssp SSTHHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHHHHC
T ss_pred ECCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHHC
T ss_conf 8362675067876434466667579991637999987999999999822
|
| >d1ne6a1 b.82.3.2 (A:109-244) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.75 E-value=3.1e-18 Score=126.86 Aligned_cols=115 Identities=22% Similarity=0.296 Sum_probs=105.7
Q ss_pred HHHHHHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 98999955151000488999999997523231278989997688778599999308999980563232221343457754
Q 002560 595 LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHV 674 (908)
Q Consensus 595 ~~~~~~L~~~~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~ 674 (908)
....+.++++++|+.++..++..++..+..+.|++|++|+++|++++.+|||.+|.+++....+
T Consensus 16 ~~l~~~l~~~~lF~~l~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~yiI~~G~v~v~~~~~---------------- 79 (136)
T d1ne6a1 16 AALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE---------------- 79 (136)
T ss_dssp HHHHHHHHHCGGGTSCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEETTE----------------
T ss_pred HHHHHHHHCCHHHHHCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEECCCCEEEECCCC----------------
T ss_conf 9999999679705529999999984646999989999999599984112552589541403310----------------
Q ss_pred CCCCCCCCCEEEEECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 6678876520246748998001011104585651686308559999623332222376433
Q 002560 675 EDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTK 735 (908)
Q Consensus 675 ~~~~~~~~~~~~~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~ 735 (908)
.+..+++|++|||.+++.+.++.+|++|.++|.++.|++++|.+++...+.
T Consensus 80 ----------~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~f~~ll~~~~~ 130 (136)
T d1ne6a1 80 ----------WATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTL 130 (136)
T ss_dssp ----------EEEEECTTCEECCHHHHHCCCCCSEEEESSCEEEEEEEHHHHHHHTHHHHH
T ss_pred ----------CCCEECCCCCCCCHHHCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHH
T ss_conf ----------110213556325099829996127999914989999989999999800999
|
| >d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory subunit of Protein kinase A species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.75 E-value=7.5e-18 Score=124.53 Aligned_cols=120 Identities=18% Similarity=0.205 Sum_probs=108.5
Q ss_pred HHHHHHHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 69899995515100048899999999752323127898999768877859999930899998056323222134345775
Q 002560 594 NLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLH 673 (908)
Q Consensus 594 ~~~~~~~L~~~~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~ 673 (908)
.....++|+++++|+.++..++..++..+..+.|++|++|+++|++++.+|+|.+|.|+++...+
T Consensus 11 ~~~l~~~l~~~~~F~~l~~~~~~~l~~~~~~~~~~~g~~I~~~G~~~~~~y~I~~G~v~v~~~~~--------------- 75 (136)
T d1cx4a1 11 RNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCD--------------- 75 (136)
T ss_dssp HHHHHHHHTTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEEEET---------------
T ss_pred HHHHHHHHHCCHHHHCCCHHHHHHHHCCEEEEEECCCCEEEECCCCCHHHHHHHHHEEEEEECCC---------------
T ss_conf 99999999689835459999999984455999989999999799822145541312267730465---------------
Q ss_pred CCCCCCCCCCEEEEECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 46678876520246748998001011104585651686308559999623332222376433
Q 002560 674 VEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTK 735 (908)
Q Consensus 674 ~~~~~~~~~~~~~~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~ 735 (908)
+....+..+++|++||+.+++.+.++.++++|.++|.++.|+++.|.+++-..+.
T Consensus 76 -------~~~~~~~~l~~g~~fg~~~l~~~~~~~~s~~a~~~~~~~~i~~~~f~~ll~~~~~ 130 (136)
T d1cx4a1 76 -------GVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGLDRVTFRRIIVKNNA 130 (136)
T ss_dssp -------TEEEEEEEEESSCEECHHHHHHCCCCCSEEEESSCEEEEEEEHHHHHHHHHHHHH
T ss_pred -------CCEEEEECCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHH
T ss_conf -------4416521037753203278738996037999877889999859999999986999
|
| >d2gaua2 b.82.3.2 (A:10-151) Transcriptional regulator PG0396, N-terminal domain {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Transcriptional regulator PG0396, N-terminal domain species: Porphyromonas gingivalis [TaxId: 837]
Probab=99.74 E-value=1.9e-17 Score=122.05 Aligned_cols=114 Identities=14% Similarity=0.181 Sum_probs=105.2
Q ss_pred CCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHH
Q ss_conf 13338999999999532559996589889908886893999998699999951566764344887650588991201222
Q 002560 479 FLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELAL 558 (908)
Q Consensus 479 ~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~G~~fGe~al 558 (908)
.+|+.|+++++..+...+..+.|++|++|+.+|+.++.+|+|.+|.++++..+++|++....++ ++|++||+.++
T Consensus 7 elf~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~ly~v~~G~v~~~~~~~~g~~~~~~~~-----~~G~~~G~~~~ 81 (142)
T d2gaua2 7 DVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIV-----KPGQFFGMRPY 81 (142)
T ss_dssp HHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEE-----CTTCEESHHHH
T ss_pred HHHCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEECCEEEEEECCCCCEEEEECC-----CCCCHHHHHHH
T ss_conf 9980699999999986199999999999990888155579998523056740455420223213-----54210124554
Q ss_pred HCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHH
Q ss_conf 059984119998346479998188899987444666989
Q 002560 559 MYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 559 l~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~~~ 597 (908)
+.+.|+.+++.|.++|.++.|++++|.+++.+++.....
T Consensus 82 ~~~~~~~~~~~a~~~s~v~~i~~~~~~~l~~~~~~~~~~ 120 (142)
T d2gaua2 82 FAEETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCRY 120 (142)
T ss_dssp HHTSCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_pred HCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHHH
T ss_conf 226772359996688799998599999999879899999
|
| >d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Regulatory domain of Epac2, domains 1 and 3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.73 E-value=1.9e-17 Score=122.00 Aligned_cols=116 Identities=22% Similarity=0.283 Sum_probs=104.1
Q ss_pred HHHHHHHHHCHHHCCCCHHHHHHHHHHCCCCCC-CCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 989999551510004889999999975232312-7898999768877859999930899998056323222134345775
Q 002560 595 LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSF-SAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLH 673 (908)
Q Consensus 595 ~~~~~~L~~~~~l~~l~~~~l~~la~~l~~~~~-~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~ 673 (908)
......|+++++|+.++...+.+++..+..+.| ++|++|+++|++++.+|||.+|.|.+.....
T Consensus 6 ~~i~~~L~~~~~F~~l~~~~l~~l~~~~~~~~~~~~ge~I~~~gd~~~~lyii~~G~v~~~~~~~--------------- 70 (124)
T d1o7fa3 6 EIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGK--------------- 70 (124)
T ss_dssp HHHHHHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEETTT---------------
T ss_pred HHHHHHHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCCEEEECCCCCCEEEEEECCEEEEEEEEE---------------
T ss_conf 99999984897053699999999984085999828998999799947668999704699997520---------------
Q ss_pred CCCCCCCCCCEEEEECCCCCEECHHHHCCCCCCCCEEEECCC-EEEEEECCCCCCCCCCCCCC
Q ss_conf 466788765202467489980010111045856516863085-59999623332222376433
Q 002560 674 VEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDD-VVCAILTKEKFDLVVGPLTK 735 (908)
Q Consensus 674 ~~~~~~~~~~~~~~~l~~G~~FGe~all~~~~r~~tv~a~~~-~~~~~i~~~~f~~llg~~~~ 735 (908)
..+..+++|++|||.+++.+.+|.+|++|.++ |.|+.|++++|.+++.++|+
T Consensus 71 ----------~~~~~~~~G~~fGe~~ll~~~~r~~t~~a~~~~~~l~~i~~~~f~~il~~~~~ 123 (124)
T d1o7fa3 71 ----------GVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEA 123 (124)
T ss_dssp ----------EEEEEEETTCEECGGGGTCCSCCSSEEEESSSSEEEEEEEHHHHHHHHHHTTC
T ss_pred ----------EECCCCCCCCCHHHHHHHCCCCEEEEEEEEECCEEEEEECHHHHHHHHHHCCC
T ss_conf ----------00022457840056676179960668999937689999869999999866369
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.73 E-value=2.6e-17 Score=121.15 Aligned_cols=124 Identities=10% Similarity=0.050 Sum_probs=93.5
Q ss_pred EEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHH---------------CCCHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 29998745788179999998799754999620123430---------------100688999999999752999861223
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK---------------CLGKEVQVLKEKNLMKSVSPSACVPQI 835 (908)
Q Consensus 771 ~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~---------------~~~~~~~i~~E~~il~~l~~~~~i~~~ 835 (908)
+.+.+.||+|+||.||+|.+. +++.+|+|++...... ..........|...+..+. +++++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred CHHCCEEEECCCEEEEEEECC-CCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCEE
T ss_conf 022778024856599999979-99999999986044346665565630008889999997789999999816-9991449
Q ss_pred EEEECCCCEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 3452038809999724788968889708999999999999999999999967967358999918986899
Q 002560 836 LCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 836 ~~~~~~~~~l~lv~e~~~~g~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDikp~NILid~~g 905 (908)
+.... .+++||++++..+.. ++...+..++.|++.++.|||++||+||||||+|||++..+
T Consensus 80 ~~~~~----~~lvme~~~~~~~~~-----l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~ 140 (191)
T d1zara2 80 YAWEG----NAVLMELIDAKELYR-----VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG 140 (191)
T ss_dssp EEEET----TEEEEECCCCEEGGG-----CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE
T ss_pred EEECC----CEEEEEEECCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEECCC
T ss_conf 98628----889999504565420-----01578999999999999998268889836890361142898
|
| >d1wgpa_ b.82.3.2 (A:) Probable cyclic nucleotide-gated ion channel 6 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Probable cyclic nucleotide-gated ion channel 6 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.72 E-value=7.6e-18 Score=124.49 Aligned_cols=117 Identities=18% Similarity=0.221 Sum_probs=102.7
Q ss_pred HHHHCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 95515100048899999999752323127898999768877859999930899998056323222134345775466788
Q 002560 600 LLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGT 679 (908)
Q Consensus 600 ~L~~~~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (908)
.|+++|+|+.++...+..|+..++.+.|++|++|+++|++++.+|||.+|.|+++...+ .
T Consensus 7 ~l~~vp~F~~l~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~ly~i~~G~v~~~~~~~--------------------~ 66 (137)
T d1wgpa_ 7 GVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDG--------------------G 66 (137)
T ss_dssp SCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEECCSS--------------------C
T ss_pred HHHCCHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEHHCCCCEEEEEECC--------------------C
T ss_conf 98779947179999999999855999979999998513355200000137469999649--------------------9
Q ss_pred CCCCEEEEECCCCCEECHHHHCCC---------CCCCCEEEECCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 765202467489980010111045---------856516863085599996233322223764333
Q 002560 680 QSSKELSVEKSEGSYFGEWTLLGE---------HMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736 (908)
Q Consensus 680 ~~~~~~~~~l~~G~~FGe~all~~---------~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~ 736 (908)
......+..+++|++|||.+++.. .+|.+||+|+++|+++.|++++|..++..+++.
T Consensus 67 ~~~~~~~~~l~~G~~fGE~~ll~~~~~~~~~~~~~r~~tv~a~t~~~l~~L~~~dl~~il~~~~r~ 132 (137)
T d1wgpa_ 67 RSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRRS 132 (137)
T ss_dssp SSSSSCEEECCTTCBSSTHHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHHHHCCC
T ss_pred CCEEEEEEECCCCCEECCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHHCCC
T ss_conf 850344310447868836267506787643446666757999163799998799999999982252
|
| >d1q3ea_ b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: HCN pacemaker channel species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.70 E-value=3e-17 Score=120.82 Aligned_cols=116 Identities=22% Similarity=0.277 Sum_probs=106.3
Q ss_pred HHHHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99995515100048899999999752323127898999768877859999930899998056323222134345775466
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED 676 (908)
Q Consensus 597 ~~~~L~~~~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~ 676 (908)
...+|.++++|+.++...+..++..+....|.+|++|+++|+.++.+|||.+|.|.++....
T Consensus 66 ~~~~l~~~~~F~~~~~~~l~~l~~~~~~~~~~~g~~I~~~g~~~~~ly~i~~G~v~v~~~~~------------------ 127 (193)
T d1q3ea_ 66 CRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGN------------------ 127 (193)
T ss_dssp THHHHHHCHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEC-CC------------------
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEEEEEEECCCC------------------
T ss_conf 99998202477761299999999997887622684310358877500575120577621786------------------
Q ss_pred CCCCCCCEEEEECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 78876520246748998001011104585651686308559999623332222376433344
Q 002560 677 DGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 677 ~~~~~~~~~~~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
.+..+++|++|||.+++++.+++++++|.++|+++.|++++|.+++...|.+.+
T Consensus 128 --------~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~l~~~~f~~ll~~~p~~~~ 181 (193)
T d1q3ea_ 128 --------KEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRR 181 (193)
T ss_dssp --------CEEEECTTCEECHHHHHHCSBCSSEEEESSCEEEEEEEHHHHHHHHHHSGGGHH
T ss_pred --------CEEEECCCEEEEEEECCCCCCCCCCCEECCCEEEEEEEHHHHHHHHHHCHHHHH
T ss_conf --------214650653655420247774212422457469999769999999987999999
|
| >d1i5za2 b.82.3.2 (A:6-137) Catabolite gene activator protein, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Catabolite gene activator protein, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=6.6e-16 Score=112.47 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=95.8
Q ss_pred CHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHCC-CC
Q ss_conf 99999999532559996589889908886893999998699999951566764344887650588991201222059-98
Q 002560 485 TDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN-KP 563 (908)
Q Consensus 485 ~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~G~~fGe~all~~-~~ 563 (908)
+++.++.+++.+..+.|++|++|+++||+++.+|||++|.++++....+|++.....+ .+|++||+.+++.+ .+
T Consensus 2 sd~~le~l~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~~~~~~~~g~e~~l~~~-----~~G~~~G~~~~~~~~~~ 76 (132)
T d1i5za2 2 TDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYL-----NQGDFIGELGLFEEGQE 76 (132)
T ss_dssp CCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEECCEEEEEECTTCCEEEEEEE-----CTTCEESCTTTTSSSCB
T ss_pred CHHHHHHHHHHCEEEEECCCCEEECCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHH-----CCCCCCCHHHHHCCCCC
T ss_conf 8799999997089999994899981889788799999733216522442125566550-----75342115999648766
Q ss_pred CEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 411999834647999818889998744466698
Q 002560 564 LQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 564 r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~~ 596 (908)
+.++++|.++|.++.|++++|.+++.+++....
T Consensus 77 ~~~~~~a~~~~~v~~i~~~~~~~~~~~~~~~~~ 109 (132)
T d1i5za2 77 RSAWVRAKTACEVAEISYKKFRQLIQVNPDILM 109 (132)
T ss_dssp CCSEEEESSCEEEEEEEHHHHHHHHHHCTHHHH
T ss_pred CEEEEEECCCEEEEEECHHHHHHHHHHCHHHHH
T ss_conf 618999914538999839999999866999999
|
| >d1vp6a_ b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Putative ion channel CnbD species: Mesorhizobium loti [TaxId: 381]
Probab=99.67 E-value=8.7e-17 Score=117.95 Aligned_cols=116 Identities=22% Similarity=0.366 Sum_probs=105.1
Q ss_pred HHHHHHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 98999955151000488999999997523231278989997688778599999308999980563232221343457754
Q 002560 595 LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHV 674 (908)
Q Consensus 595 ~~~~~~L~~~~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~ 674 (908)
...+++|+++|+|+.++..++..++..++.+.|++|++|+++|++++.+|+|.+|.|+++....
T Consensus 7 ~~~~~~l~~~p~F~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~I~~G~v~v~~~~~---------------- 70 (133)
T d1vp6a_ 7 VRNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNP---------------- 70 (133)
T ss_dssp HHHHHHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSSC----------------
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCCCEEEECCCCEEEEEEE----------------
T ss_conf 8899999789752469999999999738899989999999399987653443035527999642----------------
Q ss_pred CCCCCCCCCEEEEECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 6678876520246748998001011104585651686308559999623332222376433344
Q 002560 675 EDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 675 ~~~~~~~~~~~~~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
..+.+|++||+.+++.+.++.++++|.++|.++.|++++|.+++...|.+..
T Consensus 71 ------------~~l~~G~~~G~~~~l~~~~~~~~~~a~~~~~i~~i~~~~~~~l~~~~p~~~~ 122 (133)
T d1vp6a_ 71 ------------VELGPGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAE 122 (133)
T ss_dssp ------------EEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEEEHHHHHHHHHHCHHHHH
T ss_pred ------------EEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHCHHHHH
T ss_conf ------------1341575322221469985146699898779999869999999970999999
|
| >d2oz6a2 b.82.3.2 (A:9-142) Cyclic AMP receptor-like protein Vfr {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Cyclic AMP receptor-like protein Vfr species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.66 E-value=1.4e-15 Score=110.43 Aligned_cols=105 Identities=18% Similarity=0.236 Sum_probs=93.7
Q ss_pred HHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHCC----
Q ss_conf 9999999532559996589889908886893999998699999951566764344887650588991201222059----
Q 002560 486 DSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN---- 561 (908)
Q Consensus 486 ~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~G~~fGe~all~~---- 561 (908)
.++++.|+..+..+.|++|++|+++|++++.+|+|++|.++++....+|++.....+ +||++||+++++.+
T Consensus 2 ~~~le~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~-----~~g~~~G~~~~~~~~~~~ 76 (134)
T d2oz6a2 2 LKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYL-----NSGDFFGELGLFEKEGSE 76 (134)
T ss_dssp HHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEE-----ETTCEESCTTTCC-----
T ss_pred HHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEEECCCCEEEEECCCCCCEEEEC-----CCCCCCCHHHHHCCCCCC
T ss_conf 689999997089999898999994998177899999853215664012332101341-----589834518772576545
Q ss_pred CCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHH
Q ss_conf 9841199983464799981888999874446669
Q 002560 562 KPLQASVRAVTNGMLWALKREDFRGILMSEFSNL 595 (908)
Q Consensus 562 ~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~ 595 (908)
.|++++++|.++|.++.|+++.|..++..++...
T Consensus 77 ~~~~~~~~a~~~~~vl~i~~~~~~~~~~~~~~~~ 110 (134)
T d2oz6a2 77 QERSAWVRAKVECEVAEISYAKFRELSQQDSEIL 110 (134)
T ss_dssp CBCCSEEEESSCEEEEEEEHHHHHHHHHHCHHHH
T ss_pred CCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHH
T ss_conf 4220499988888999982999999998898999
|
| >d1zyba2 b.82.3.2 (A:1-147) Probable transcription regulator BT4300, N-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Probable transcription regulator BT4300, N-terminal domain species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.66 E-value=3.3e-16 Score=114.35 Aligned_cols=121 Identities=15% Similarity=0.168 Sum_probs=108.1
Q ss_pred HHHHHHHCHHHCCCCHHHHHHHHHHCC--CCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 999955151000488999999997523--231278989997688778599999308999980563232221343457754
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLS--EVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHV 674 (908)
Q Consensus 597 ~~~~L~~~~~l~~l~~~~l~~la~~l~--~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~ 674 (908)
.+..|.++|+|+.++..++..+++.+. .+.|++|++|+.+|++++.+|+|.+|.|++.....
T Consensus 4 ~~d~L~~~~lF~~l~~~~~~~ll~~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~v~~~~~---------------- 67 (147)
T d1zyba2 4 MFDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAK---------------- 67 (147)
T ss_dssp HHTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECG----------------
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEEECCEEEEEEECC----------------
T ss_conf 9999967906026999999999851860899988998987315776388998211399999748----------------
Q ss_pred CCCCCCCCCEEEEECCCCCEECHHHHCCCCCC-CCEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 66788765202467489980010111045856-51686308559999623332222376433344
Q 002560 675 EDDGTQSSKELSVEKSEGSYFGEWTLLGEHMG-SLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 675 ~~~~~~~~~~~~~~l~~G~~FGe~all~~~~r-~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
++++..+..+.+|++||+.+++...++ +++++|.++|.++.|++..|.+++...|.+..
T Consensus 68 -----~g~~~~~~~~~~g~~fGe~~~~~~~~~~~~~v~a~~~~~vl~i~~~~~~~~~~~~p~~~~ 127 (147)
T d1zyba2 68 -----ENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCISKAFVLSDLFRYDIFRL 127 (147)
T ss_dssp -----GGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCEEEEEEEHHHHHHTGGGSHHHHH
T ss_pred -----CCCEEEEEECCCCCEECCCHHHCCCCCCCCEEEECCEEEEEEHHHHHHHHHHHHCHHHHH
T ss_conf -----997899997489988010022112345533034122033331239999999987999999
|
| >d3e5ua2 b.82.3.2 (A:9-147) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Chlorophenol reduction protein CprK species: Desulfitobacterium hafniense [TaxId: 49338]
Probab=99.63 E-value=9.7e-16 Score=111.44 Aligned_cols=114 Identities=10% Similarity=0.006 Sum_probs=100.0
Q ss_pred HHCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCH
Q ss_conf 72391333899999999953255999658988990888689399999869999995156676434488765058899120
Q 002560 475 LHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFG 554 (908)
Q Consensus 475 l~~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~G~~fG 554 (908)
+..+..+..++.++++.++..+..+.|++|++|+.+|+.++.+|+|++|.++++....+|++.....+ ++|++||
T Consensus 3 ~~~~~p~~~~p~e~l~~l~~~~~~~~y~kg~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~l~~~-----~~g~~~g 77 (139)
T d3e5ua2 3 CGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYA-----GGNSLIG 77 (139)
T ss_dssp CCCSSSBSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESEEEEEEECTTSCEEEEEEE-----ETTCEEC
T ss_pred HHHCCCCCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCEEEC-----CCCCEEE
T ss_conf 53269987899999999997188999889998995799778899999644658886122332101232-----5332640
Q ss_pred HHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 122205998411999834647999818889998744466698
Q 002560 555 ELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 555 e~all~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~~ 596 (908)
+++ ..++..++.|.++|.++.|+++.|..++.++|....
T Consensus 78 ~~~---~~~~~~~~~a~~~~~v~~i~~~~f~~l~~~~p~l~~ 116 (139)
T d3e5ua2 78 KLY---PTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIF 116 (139)
T ss_dssp CCS---CCSCEEEEEESSCEEEEEECHHHHHHHHHHCTHHHH
T ss_pred HHH---HHCCCCCCCCCCCCEEEEEEHHHHHHHHHCCHHHHH
T ss_conf 212---302210000024236789608999998830999999
|
| >d1o5la1 b.82.3.2 (A:1-129) CRP-like transcriptional regulator TM1171, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: CRP-like transcriptional regulator TM1171, N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=99.61 E-value=4e-15 Score=107.66 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=91.4
Q ss_pred HHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCC-EEE
Q ss_conf 9999532559996589889908886893999998699999951566764344887650588991201222059984-119
Q 002560 489 CHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPL-QAS 567 (908)
Q Consensus 489 ~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~G~~fGe~all~~~~r-~at 567 (908)
++.|+.++..+.|++|++|+++|++++++|+|++|.++++....+|++.....+ ++|++||+.+++.+.++ +++
T Consensus 3 l~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~-----~~g~~~g~~~~~~~~~~~~~~ 77 (129)
T d1o5la1 3 LKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEI-----KPVQIIASGFIFSSEPRFPVN 77 (129)
T ss_dssp GGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEE-----CSSEESSGGGTTSSSCBCSSE
T ss_pred HHHHHHCCEEEEECCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCCHHHHC-----CCCCCCCHHHHHCCCCCCCEE
T ss_conf 898974789999999999998898676799996056099996302442022212-----544322147775048886479
Q ss_pred EEECCCEEEEEEEHHHHHHHHHHHHHHH
Q ss_conf 9983464799981888999874446669
Q 002560 568 VRAVTNGMLWALKREDFRGILMSEFSNL 595 (908)
Q Consensus 568 v~A~~~~~l~~i~r~~f~~il~~~~~~~ 595 (908)
+.|.++|+++.|+++.|..++.+++...
T Consensus 78 ~~a~~~~~vl~i~~~~~~~~~~~~~~~~ 105 (129)
T d1o5la1 78 VVAGENSKILSIPKEVFLDLLMKDRELL 105 (129)
T ss_dssp EEESSSEEEEEEEHHHHHHHHHHCHHHH
T ss_pred EEEECCCEEEEECHHHHHHHHHHCHHHH
T ss_conf 9961333899984999999998699999
|
| >d2gaua2 b.82.3.2 (A:10-151) Transcriptional regulator PG0396, N-terminal domain {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Transcriptional regulator PG0396, N-terminal domain species: Porphyromonas gingivalis [TaxId: 837]
Probab=99.61 E-value=8.1e-16 Score=111.91 Aligned_cols=113 Identities=18% Similarity=0.228 Sum_probs=104.9
Q ss_pred HHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 10004889999999975232312789899976887785999993089999805632322213434577546678876520
Q 002560 605 DLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKE 684 (908)
Q Consensus 605 ~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (908)
.+|+.++..++..++..+..+.|++|++|+.+|++++.+|+|.+|.++++...+ ++.+.
T Consensus 7 elf~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~ly~v~~G~v~~~~~~~---------------------~g~~~ 65 (142)
T d2gaua2 7 DVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGV---------------------YGRFH 65 (142)
T ss_dssp HHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC--------------------------CCC
T ss_pred HHHCCCCHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEEECCEEEEEECC---------------------CCCEE
T ss_conf 998069999999998619999999999999088815557999852305674045---------------------54202
Q ss_pred EEEECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 246748998001011104585651686308559999623332222376433344
Q 002560 685 LSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 685 ~~~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
.+..+++|++||+.+++.+.++.++++|.++++++.|+++.|.+++...+.+..
T Consensus 66 ~~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~s~v~~i~~~~~~~l~~~~~~~~~ 119 (142)
T d2gaua2 66 ISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCR 119 (142)
T ss_dssp EEEEECTTCEESHHHHHHTSCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHH
T ss_pred EEECCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHH
T ss_conf 232135421012455422677235999668879999859999999987989999
|
| >d1ft9a2 b.82.3.1 (A:2-133) CO-sensing protein CooA, N-terminal domain {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: CO-sensing protein CooA, N-terminal domain domain: CO-sensing protein CooA, N-terminal domain species: Rhodospirillum rubrum [TaxId: 1085]
Probab=99.56 E-value=4.3e-15 Score=107.41 Aligned_cols=107 Identities=14% Similarity=0.049 Sum_probs=93.7
Q ss_pred CCCCCCCCCHHHHHHHHHCCEEEEECCCCEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHH
Q ss_conf 39133389999999995325599965898899088868939999986999999515667643448876505889912012
Q 002560 477 DHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGEL 556 (908)
Q Consensus 477 ~~~lf~~L~~~~~~~l~~~~~~~~~~~ge~Ii~qGd~~~~~yiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~G~~fGe~ 556 (908)
++++|+.|++++++.+.+.++.+.|++|++|+++|+.++.+|+|++|.++++...+ +++.... .+++|++||+.
T Consensus 3 r~~~~~~L~~~~~~~~~~~~~~~~~~kG~~i~~~g~~~~~ly~v~~G~v~~~~~~~-g~e~~l~-----~~~~g~~f~~~ 76 (132)
T d1ft9a2 3 RFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGE-EREISLF-----YLTSGDMFCMH 76 (132)
T ss_dssp CCCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEEEEET-TEEEEEE-----EEETTCEEESC
T ss_pred CCCHHHHCCHHHHHHHHHHCEEEEECCCCEEECCCCCCCEEEEEEECEEEEECCCC-CCCEEEC-----CCCCCCCCCCC
T ss_conf 86765759989999999748789841870788799977789999767585520454-1000100-----01222223234
Q ss_pred HHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 2205998411999834647999818889998744466698
Q 002560 557 ALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 557 all~~~~r~atv~A~~~~~l~~i~r~~f~~il~~~~~~~~ 596 (908)
+++++.|.++|.++.|+++.|.+++.++|....
T Consensus 77 -------~~~~v~A~~~s~v~~i~~~~~~~ll~~~p~~~~ 109 (132)
T d1ft9a2 77 -------SGCLVEATERTEVRFADIRTFEQKLQTCPSMAW 109 (132)
T ss_dssp -------SSCEEEESSCEEEEEECHHHHHHHHHHCGGGHH
T ss_pred -------CCCCCEECCCEEEEEEHHHHHHHHHHHHHHHHH
T ss_conf -------556123210101310018899999998999999
|
| >d1i5za2 b.82.3.2 (A:6-137) Catabolite gene activator protein, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Catabolite gene activator protein, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=1.4e-14 Score=104.22 Aligned_cols=107 Identities=19% Similarity=0.243 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 89999999975232312789899976887785999993089999805632322213434577546678876520246748
Q 002560 611 TILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKS 690 (908)
Q Consensus 611 ~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 690 (908)
++..+..+...++.+.|++|++|+++|++.+.+|||.+|.++++.... .+++..+..+.
T Consensus 2 sd~~le~l~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~~~~~~~---------------------~g~e~~l~~~~ 60 (132)
T d1i5za2 2 TDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDE---------------------EGKEMILSYLN 60 (132)
T ss_dssp CCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEECCEEEEEECT---------------------TCCEEEEEEEC
T ss_pred CHHHHHHHHHHCEEEEECCCCEEECCCCCCCEEEEEEECCCEEEECCC---------------------CCHHHHHHHHC
T ss_conf 879999999708999999489998188978879999973321652244---------------------21255665507
Q ss_pred CCCEECHHHHCCC-CCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 9980010111045-85651686308559999623332222376433344
Q 002560 691 EGSYFGEWTLLGE-HMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 691 ~G~~FGe~all~~-~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+|++||+.+++.+ .++.++++|.++|.++.|+++.|.+++...+.+..
T Consensus 61 ~G~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~~~~~~~~~~~ 109 (132)
T d1i5za2 61 QGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILM 109 (132)
T ss_dssp TTCEESCTTTTSSSCBCCSEEEESSCEEEEEEEHHHHHHHHHHCTHHHH
T ss_pred CCCCCCHHHHHCCCCCCEEEEEECCCEEEEEECHHHHHHHHHHCHHHHH
T ss_conf 5342115999648766618999914538999839999999866999999
|
| >d2oz6a2 b.82.3.2 (A:9-142) Cyclic AMP receptor-like protein Vfr {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Cyclic AMP receptor-like protein Vfr species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.51 E-value=2.1e-14 Score=103.12 Aligned_cols=105 Identities=21% Similarity=0.270 Sum_probs=94.0
Q ss_pred HHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 99999997523231278989997688778599999308999980563232221343457754667887652024674899
Q 002560 613 LQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEG 692 (908)
Q Consensus 613 ~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G 692 (908)
.+++++...++.+.|++|++|+++|++++.+|+|.+|.|+++.... ++++..+..+.+|
T Consensus 3 ~~le~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~v~~~~~---------------------~g~~~~~~~~~~g 61 (134)
T d2oz6a2 3 KHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDD---------------------DGREMIIGYLNSG 61 (134)
T ss_dssp HHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECT---------------------TSCEEEEEEEETT
T ss_pred HHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEEECCCCEEEEEC---------------------CCCCCEEEECCCC
T ss_conf 8999999708999989899999499817789999985321566401---------------------2332101341589
Q ss_pred CEECHHHHCCC----CCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 80010111045----85651686308559999623332222376433344
Q 002560 693 SYFGEWTLLGE----HMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 693 ~~FGe~all~~----~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
++||+.+++.. .+++++++|.++|+++.|+++.|.+++...+.+..
T Consensus 62 ~~~G~~~~~~~~~~~~~~~~~~~a~~~~~vl~i~~~~~~~~~~~~~~~~~ 111 (134)
T d2oz6a2 62 DFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILY 111 (134)
T ss_dssp CEESCTTTCC-----CBCCSEEEESSCEEEEEEEHHHHHHHHHHCHHHHH
T ss_pred CCCCHHHHHCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCHHHHH
T ss_conf 83451877257654542204999888889999829999999988989999
|
| >d1o5la1 b.82.3.2 (A:1-129) CRP-like transcriptional regulator TM1171, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: CRP-like transcriptional regulator TM1171, N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=99.42 E-value=5.3e-14 Score=100.67 Aligned_cols=103 Identities=12% Similarity=0.100 Sum_probs=90.7
Q ss_pred HHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE
Q ss_conf 99999752323127898999768877859999930899998056323222134345775466788765202467489980
Q 002560 615 LSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSY 694 (908)
Q Consensus 615 l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~ 694 (908)
+.+++.....+.|++|++|+++|++++++|+|.+|.++++.... .+.+..+..+++|++
T Consensus 3 l~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~i~~G~v~~~~~~~---------------------~g~~~~~~~~~~g~~ 61 (129)
T d1o5la1 3 LKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSE---------------------NGKTLEIDEIKPVQI 61 (129)
T ss_dssp GGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECT---------------------TSCEEEEEEECSSEE
T ss_pred HHHHHHCCEEEEECCCCEEEECCCCCCEEEEEECCCCEEEEEEC---------------------CCCCCHHHHCCCCCC
T ss_conf 89897478999999999999889867679999605609999630---------------------244202221254432
Q ss_pred ECHHHHCCCCC-CCCEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 01011104585-651686308559999623332222376433344
Q 002560 695 FGEWTLLGEHM-GSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 695 FGe~all~~~~-r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
||+.+++.+.+ +.++++|.++++++.|+++.|.+++...+.+..
T Consensus 62 ~g~~~~~~~~~~~~~~~~a~~~~~vl~i~~~~~~~~~~~~~~~~~ 106 (129)
T d1o5la1 62 IASGFIFSSEPRFPVNVVAGENSKILSIPKEVFLDLLMKDRELLL 106 (129)
T ss_dssp SSGGGTTSSSCBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHH
T ss_pred CCHHHHHCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHCHHHHH
T ss_conf 214777504888647999613338999849999999986999999
|
| >d1ft9a2 b.82.3.1 (A:2-133) CO-sensing protein CooA, N-terminal domain {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: CO-sensing protein CooA, N-terminal domain domain: CO-sensing protein CooA, N-terminal domain species: Rhodospirillum rubrum [TaxId: 1085]
Probab=99.38 E-value=8.1e-14 Score=99.52 Aligned_cols=107 Identities=7% Similarity=0.109 Sum_probs=96.1
Q ss_pred HCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 15100048899999999752323127898999768877859999930899998056323222134345775466788765
Q 002560 603 SVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSS 682 (908)
Q Consensus 603 ~~~~l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (908)
+.++|..|+..++..+...++.++|++|++|+++|+.++.+|+|.+|.++++...+ ++
T Consensus 3 r~~~~~~L~~~~~~~~~~~~~~~~~~kG~~i~~~g~~~~~ly~v~~G~v~~~~~~~----------------------g~ 60 (132)
T d1ft9a2 3 RFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGE----------------------ER 60 (132)
T ss_dssp CCCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEEEEET----------------------TE
T ss_pred CCCHHHHCCHHHHHHHHHHCEEEEECCCCEEECCCCCCCEEEEEEECEEEEECCCC----------------------CC
T ss_conf 86765759989999999748789841870788799977789999767585520454----------------------10
Q ss_pred CEEEEECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 20246748998001011104585651686308559999623332222376433344
Q 002560 683 KELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 683 ~~~~~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+..+..+.+|++||+. ++++++|.++|.++.|+++.|.+++...|.+..
T Consensus 61 e~~l~~~~~g~~f~~~-------~~~~v~A~~~s~v~~i~~~~~~~ll~~~p~~~~ 109 (132)
T d1ft9a2 61 EISLFYLTSGDMFCMH-------SGCLVEATERTEVRFADIRTFEQKLQTCPSMAW 109 (132)
T ss_dssp EEEEEEEETTCEEESC-------SSCEEEESSCEEEEEECHHHHHHHHHHCGGGHH
T ss_pred CEEECCCCCCCCCCCC-------CCCCCEECCCEEEEEEHHHHHHHHHHHHHHHHH
T ss_conf 0010001222223234-------556123210101310018899999998999999
|
| >d3e5ua2 b.82.3.2 (A:9-147) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: cAMP-binding domain-like family: cAMP-binding domain domain: Chlorophenol reduction protein CprK species: Desulfitobacterium hafniense [TaxId: 49338]
Probab=99.34 E-value=2.9e-13 Score=96.14 Aligned_cols=108 Identities=12% Similarity=0.175 Sum_probs=94.8
Q ss_pred HCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 00488999999997523231278989997688778599999308999980563232221343457754667887652024
Q 002560 607 LSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELS 686 (908)
Q Consensus 607 l~~l~~~~l~~la~~l~~~~~~~G~~Ii~qG~~~~~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (908)
+..++..++.+++.....++|++|++|+.+|++++.+|+|.+|.+++++... .+++..+
T Consensus 9 ~~~~p~e~l~~l~~~~~~~~y~kg~~i~~~g~~~~~~y~v~~G~v~~~~~~~---------------------~g~~~~l 67 (139)
T d3e5ua2 9 DNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFE---------------------DGSEKLL 67 (139)
T ss_dssp BSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESEEEEEEECT---------------------TSCEEEE
T ss_pred CCCCCHHHHHHHHHHCEEEEECCCCEEEECCCCCCEEEEEEECCCEEEEEEC---------------------CCCCCCE
T ss_conf 8789999999999718899988999899579977889999964465888612---------------------2332101
Q ss_pred EECCCCCEECHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 6748998001011104585651686308559999623332222376433344
Q 002560 687 VEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 687 ~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
..+.+|++||+... .++.++++|.++++++.|+++.|..++...+.+..
T Consensus 68 ~~~~~g~~~g~~~~---~~~~~~~~a~~~~~v~~i~~~~f~~l~~~~p~l~~ 116 (139)
T d3e5ua2 68 YYAGGNSLIGKLYP---TGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIF 116 (139)
T ss_dssp EEEETTCEECCCSC---CSCEEEEEESSCEEEEEECHHHHHHHHHHCTHHHH
T ss_pred EECCCCCEEEHHHH---HCCCCCCCCCCCCEEEEEEHHHHHHHHHCCHHHHH
T ss_conf 23253326402123---02210000024236789608999998830999999
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.94 E-value=0.00012 Score=42.60 Aligned_cols=88 Identities=15% Similarity=0.073 Sum_probs=45.0
Q ss_pred CCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEE
Q ss_conf 24529998745788179999998799754999620123430100688999999999752999861223345203880999
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~lg~G~~g~V~~~~~~~t~~~~AiK~~~~~~~~~~~~~~~i~~E~~il~~l~~~~~i~~~~~~~~~~~~l~l 847 (908)
++.|++.+..+-++.+.||++. ..++.+.+|+........ ...+.+|...+..+..+--+++++....+....|+
T Consensus 13 ~~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~---~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l 87 (263)
T d1j7la_ 13 IEKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HTTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHCEEEEECCCCCCCCCEEEEE--ECCCEEEEEECCCCCCCC---HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
T ss_conf 1352799767899877189999--089869999848876532---55699999999987606998728999750896499
Q ss_pred EEECCCCCCHHHH
Q ss_conf 9724788968889
Q 002560 848 LLNTYLACPLASI 860 (908)
Q Consensus 848 v~e~~~~g~L~~~ 860 (908)
+|++++|.++...
T Consensus 88 v~~~l~G~~~~~~ 100 (263)
T d1j7la_ 88 LMSEADGVLCSEE 100 (263)
T ss_dssp EEECCSSEEHHHH
T ss_pred EEEECCCCCCCCC
T ss_conf 9986043343543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.37 E-value=0.00095 Score=37.13 Aligned_cols=19 Identities=11% Similarity=0.207 Sum_probs=8.8
Q ss_pred CCCEEEEEEECCCCCEEEEECC
Q ss_conf 5531999990799779999757
Q 002560 312 ANPEIVVWELTNDHPFFVLASD 333 (908)
Q Consensus 312 ~~Pdv~~~~l~~~d~flil~SD 333 (908)
..|.+... ++... +++..|
T Consensus 94 ~vP~v~~~--d~~~~-~lvmE~ 112 (392)
T d2pula1 94 LVPRVFYS--DTEMA-VTVMED 112 (392)
T ss_dssp GSCCEEEE--ETTTT-EEEECC
T ss_pred CCCEEEEE--CCCCC-EEEEEC
T ss_conf 85528998--59887-798713
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.43 E-value=0.049 Score=26.52 Aligned_cols=10 Identities=0% Similarity=0.375 Sum_probs=4.5
Q ss_pred CEEEEEEECC
Q ss_conf 9799999046
Q 002560 205 RTIYVANSGD 214 (908)
Q Consensus 205 ~~l~vanvGD 214 (908)
|.+|...+.+
T Consensus 56 N~~y~v~~~~ 65 (395)
T d1nw1a_ 56 NMLFLCRLSE 65 (395)
T ss_dssp EEEEEEEECT
T ss_pred CCEEEEEECC
T ss_conf 4348999688
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=81.16 E-value=0.97 Score=18.49 Aligned_cols=11 Identities=18% Similarity=0.350 Sum_probs=4.7
Q ss_pred CCEEEEEEECC
Q ss_conf 99799999046
Q 002560 204 GRTIYVANSGD 214 (908)
Q Consensus 204 ~~~l~vanvGD 214 (908)
.|..|-+..-|
T Consensus 35 EN~vy~v~~~d 45 (325)
T d1zyla1 35 ENRVYQFQDED 45 (325)
T ss_dssp SSEEEEECCTT
T ss_pred CCEEEEEECCC
T ss_conf 20269998389
|