Citrus Sinensis ID: 002599
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 902 | 2.2.26 [Sep-21-2011] | |||||||
| P49608 | 898 | Aconitate hydratase, cyto | N/A | no | 0.881 | 0.885 | 0.924 | 0.0 | |
| Q9SIB9 | 990 | Aconitate hydratase 2, mi | yes | no | 0.929 | 0.846 | 0.868 | 0.0 | |
| Q6YZX6 | 898 | Putative aconitate hydrat | yes | no | 0.881 | 0.885 | 0.899 | 0.0 | |
| Q42560 | 898 | Aconitate hydratase 1 OS= | no | no | 0.881 | 0.885 | 0.864 | 0.0 | |
| Q94A28 | 995 | Aconitate hydratase 3, mi | no | no | 0.940 | 0.852 | 0.804 | 0.0 | |
| Q42669 | 764 | Aconitate hydratase (Frag | N/A | no | 0.723 | 0.854 | 0.842 | 0.0 | |
| Q54X73 | 894 | Probable cytoplasmic acon | yes | no | 0.874 | 0.882 | 0.626 | 0.0 | |
| P21399 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.854 | 0.867 | 0.624 | 0.0 | |
| Q90875 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.873 | 0.886 | 0.624 | 0.0 | |
| P28271 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.874 | 0.887 | 0.619 | 0.0 |
| >sp|P49608|ACOC_CUCMA Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1 | Back alignment and function desciption |
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Score = 1551 bits (4016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 735/795 (92%), Positives = 771/795 (96%)
Query: 99 MAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVK 158
MAAE+PFKE LT+LPKPGGGEFGK+YSLP+LNDPRI++LPYSIRILLESAIRNCDNFQVK
Sbjct: 1 MAAENPFKENLTSLPKPGGGEFGKYYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVK 60
Query: 159 KEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINP 218
KEDVEKIIDWENS+PKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINP
Sbjct: 61 KEDVEKIIDWENSSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINP 120
Query: 219 LVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGI 278
LVPVDLVIDHSVQVDV RSENAV+ANMELEFQRNKERFAFLKWGS+AF NMLVVPPGSGI
Sbjct: 121 LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFQNMLVVPPGSGI 180
Query: 279 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 338
VHQVNLEYLGRVVFNT+G+LYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS
Sbjct: 181 VHQVNLEYLGRVVFNTSGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240
Query: 339 MVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATI 398
MVLPGVVGFKLSGKL NGVTATDLVLTVTQMLRKHGVVGKFVEF+GDGM ELSLADRATI
Sbjct: 241 MVLPGVVGFKLSGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGDGMEELSLADRATI 300
Query: 399 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYS 458
ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETV+M+E YLRANKMFVDY EPQQE+VYS
Sbjct: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVSMIEAYLRANKMFVDYKEPQQEKVYS 360
Query: 459 SYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFS 518
SYL+L+L DVEPCISGPKRPHDRVPLKEMK+DWH+CLDNKVGFKGFA+PKE QE V KFS
Sbjct: 361 SYLQLDLTDVEPCISGPKRPHDRVPLKEMKSDWHACLDNKVGFKGFAIPKEAQENVAKFS 420
Query: 519 FHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSG 578
FHGQPAELKHGSVVIAAITSCTNTSNPSVMLGA LVAKKACELGLQVKPWVKTSLAPGSG
Sbjct: 421 FHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKACELGLQVKPWVKTSLAPGSG 480
Query: 579 VVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNR 638
VVTKYLL+SGLQ YLN+QGFHIVGYGCTTCIGNSGDLDESV++ I+DNDIVAAAVLSGNR
Sbjct: 481 VVTKYLLKSGLQPYLNQQGFHIVGYGCTTCIGNSGDLDESVSAAISDNDIVAAAVLSGNR 540
Query: 639 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTTEEI 698
NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDF+KEPIG KDGK VYF+DIWP+TEEI
Sbjct: 541 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGKGKDGKDVYFRDIWPSTEEI 600
Query: 699 AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDP 758
AEVVQSSVLPDMFKSTYE+ITKGNP WNQLSVP+ LYSWDPNSTYIHEPPYFK+MTMDP
Sbjct: 601 AEVVQSSVLPDMFKSTYESITKGNPMWNQLSVPSGTLYSWDPNSTYIHEPPYFKNMTMDP 660
Query: 759 PGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGSRRGND 818
PGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSP AKYLLERGV+R+DFNSYGSRRGND
Sbjct: 661 PGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGND 720
Query: 819 EVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYG 878
EVMARGTFANIRLVNKLL+GEVGPKTVHVPTGEKLSVF+AA KYKSAG TI+LAGAEYG
Sbjct: 721 EVMARGTFANIRLVNKLLDGEVGPKTVHVPTGEKLSVFEAAEKYKSAGQDTIVLAGAEYG 780
Query: 879 SGSSRDWAAKGPMLL 893
SGSSRDWAAKGPMLL
Sbjct: 781 SGSSRDWAAKGPMLL 795
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Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Cucurbita maxima (taxid: 3661) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9SIB9|ACO2M_ARATH Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q6YZX6|ACOC_ORYSJ Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q42560|ACO1_ARATH Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q94A28|ACO3M_ARATH Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q42669|ACOC_CUCMC Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1 | Back alignment and function description |
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| >sp|Q54X73|ACOC_DICDI Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P21399|ACOC_HUMAN Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q90875|ACOC_CHICK Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P28271|ACOC_MOUSE Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 902 | ||||||
| 285309969 | 898 | aconitate hydratase 2 [Citrus clementina | 0.881 | 0.885 | 0.994 | 0.0 | |
| 255566397 | 997 | aconitase, putative [Ricinus communis] g | 0.941 | 0.851 | 0.908 | 0.0 | |
| 449493135 | 989 | PREDICTED: aconitate hydratase, cytoplas | 0.980 | 0.893 | 0.881 | 0.0 | |
| 449453502 | 989 | PREDICTED: aconitate hydratase, cytoplas | 0.980 | 0.893 | 0.878 | 0.0 | |
| 171854675 | 995 | putative aconitase [Capsicum chinense] | 0.939 | 0.851 | 0.899 | 0.0 | |
| 356517636 | 979 | PREDICTED: aconitate hydratase, cytoplas | 0.971 | 0.894 | 0.861 | 0.0 | |
| 225460961 | 1009 | PREDICTED: aconitate hydratase 2, mitoch | 0.982 | 0.878 | 0.850 | 0.0 | |
| 356542824 | 984 | PREDICTED: aconitate hydratase, cytoplas | 0.973 | 0.892 | 0.853 | 0.0 | |
| 357471289 | 979 | Aconitate hydratase [Medicago truncatula | 0.968 | 0.892 | 0.852 | 0.0 | |
| 356550020 | 984 | PREDICTED: aconitate hydratase, cytoplas | 0.939 | 0.860 | 0.885 | 0.0 |
| >gi|285309969|emb|CBE71058.1| aconitate hydratase 2 [Citrus clementina] | Back alignment and taxonomy information |
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Score = 1649 bits (4269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 791/795 (99%), Positives = 793/795 (99%)
Query: 99 MAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVK 158
MAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVK
Sbjct: 1 MAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVK 60
Query: 159 KEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINP 218
KED+EKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINP
Sbjct: 61 KEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINP 120
Query: 219 LVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGI 278
LVPVDLVIDHSVQVDVTRSENAVKANME EFQRNKERFAFLKWGSSAFHNMLVVPPGSGI
Sbjct: 121 LVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGI 180
Query: 279 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 338
VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS
Sbjct: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240
Query: 339 MVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATI 398
MVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATI
Sbjct: 241 MVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATI 300
Query: 399 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYS 458
ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDET+AMVEGYLRANKMFVDYNEPQQERVYS
Sbjct: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETLAMVEGYLRANKMFVDYNEPQQERVYS 360
Query: 459 SYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFS 518
SYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFS
Sbjct: 361 SYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFS 420
Query: 519 FHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSG 578
FHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSG
Sbjct: 421 FHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSG 480
Query: 579 VVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNR 638
VVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVAS ITDNDIVAAAVLSGNR
Sbjct: 481 VVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNR 540
Query: 639 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTTEEI 698
NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTTEEI
Sbjct: 541 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTTEEI 600
Query: 699 AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDP 758
AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDP
Sbjct: 601 AEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDP 660
Query: 759 PGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGSRRGND 818
PGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGSRRGND
Sbjct: 661 PGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGSRRGND 720
Query: 819 EVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYG 878
EVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYG
Sbjct: 721 EVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYG 780
Query: 879 SGSSRDWAAKGPMLL 893
SGSSRDWAAKGPMLL
Sbjct: 781 SGSSRDWAAKGPMLL 795
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Source: Citrus clementina Species: Citrus clementina Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255566397|ref|XP_002524184.1| aconitase, putative [Ricinus communis] gi|223536553|gb|EEF38199.1| aconitase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449493135|ref|XP_004159202.1| PREDICTED: aconitate hydratase, cytoplasmic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449453502|ref|XP_004144496.1| PREDICTED: aconitate hydratase, cytoplasmic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|171854675|dbj|BAG16527.1| putative aconitase [Capsicum chinense] | Back alignment and taxonomy information |
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| >gi|356517636|ref|XP_003527493.1| PREDICTED: aconitate hydratase, cytoplasmic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|225460961|ref|XP_002278138.1| PREDICTED: aconitate hydratase 2, mitochondrial [Vitis vinifera] gi|297737441|emb|CBI26642.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356542824|ref|XP_003539865.1| PREDICTED: aconitate hydratase, cytoplasmic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357471289|ref|XP_003605929.1| Aconitate hydratase [Medicago truncatula] gi|355506984|gb|AES88126.1| Aconitate hydratase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356550020|ref|XP_003543388.1| PREDICTED: aconitate hydratase, cytoplasmic-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 902 | ||||||
| TAIR|locus:2063354 | 990 | ACO3 "AT2G05710" [Arabidopsis | 0.929 | 0.846 | 0.849 | 0.0 | |
| TAIR|locus:2125354 | 898 | ACO1 "AT4G35830" [Arabidopsis | 0.881 | 0.885 | 0.844 | 0.0 | |
| TAIR|locus:2116297 | 995 | ACO2 "AT4G26970" [Arabidopsis | 0.933 | 0.846 | 0.787 | 0.0 | |
| ZFIN|ZDB-GENE-031118-76 | 896 | aco1 "aconitase 1, soluble" [D | 0.881 | 0.887 | 0.606 | 6.5e-264 | |
| DICTYBASE|DDB_G0279159 | 894 | aco1 "aconitate hydratase" [Di | 0.874 | 0.882 | 0.608 | 8.6e-262 | |
| UNIPROTKB|F1NY25 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.873 | 0.886 | 0.605 | 3.7e-261 | |
| UNIPROTKB|Q90875 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.873 | 0.886 | 0.605 | 4.7e-261 | |
| MGI|MGI:87879 | 889 | Aco1 "aconitase 1" [Mus muscul | 0.874 | 0.887 | 0.601 | 4.3e-260 | |
| UNIPROTKB|Q0VCU1 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.873 | 0.886 | 0.600 | 8.9e-260 | |
| UNIPROTKB|F1MS05 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.873 | 0.886 | 0.599 | 2.4e-259 |
| TAIR|locus:2063354 ACO3 "AT2G05710" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 3783 (1336.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 715/842 (84%), Positives = 771/842 (91%)
Query: 55 AVRSFRCSVP---RWSHRVDWR-SPLSLRAQIRTVAPAIERLERAFATMAAEHPFKEILT 110
A RSF P RWSH + SP +QIR V+P ++RL+R F++MA+EHPFK I T
Sbjct: 45 ARRSFGTISPAFRRWSHSFHSKPSPFRFTSQIRAVSPVLDRLQRTFSSMASEHPFKGIFT 104
Query: 111 ALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWEN 170
LPKPGGGEFGKFYSLPALNDPR++KLPYSIRILLESAIRNCDNFQV KEDVEKIIDWE
Sbjct: 105 TLPKPGGGEFGKFYSLPALNDPRVDKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWEK 164
Query: 171 SAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSV 230
++PKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSV
Sbjct: 165 TSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSV 224
Query: 231 QVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRV 290
QVDV RSENAV+ANMELEFQRNKERFAFLKWGS+AF NMLVVPPGSGIVHQVNLEYLGRV
Sbjct: 225 QVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFQNMLVVPPGSGIVHQVNLEYLGRV 284
Query: 291 VFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSMVLPGVVGFKLS 350
VFNT G+LYPDSVVGTDSHTTMID MLGQPMSMVLPGVVGFKL+
Sbjct: 285 VFNTKGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMSMVLPGVVGFKLA 344
Query: 351 GKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMG 410
GK+ NGVTATDLVLTVTQMLRKHGVVGKFVEF+G+GM LSLADRATIANMSPEYGATMG
Sbjct: 345 GKMRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGNGMSGLSLADRATIANMSPEYGATMG 404
Query: 411 FFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSSYLELNLADVEP 470
FFPVDHVTLQYLKLTGRSDETVAM+E YLRAN MFVDYNEPQQ+RVYSSYLELNL DVEP
Sbjct: 405 FFPVDHVTLQYLKLTGRSDETVAMIEAYLRANNMFVDYNEPQQDRVYSSYLELNLDDVEP 464
Query: 471 CISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGS 530
CISGPKRPHDRV LKEMKADWHSCLD+KVGFKGFA+PKE QEKVV FSF GQPAELKHGS
Sbjct: 465 CISGPKRPHDRVTLKEMKADWHSCLDSKVGFKGFAIPKEAQEKVVNFSFDGQPAELKHGS 524
Query: 531 VVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQ 590
VVIAAITSCTNTSNPSVMLGAGLVAKKAC+LGLQVKPW+KTSLAPGSGVVTKYLL+SGLQ
Sbjct: 525 VVIAAITSCTNTSNPSVMLGAGLVAKKACDLGLQVKPWIKTSLAPGSGVVTKYLLKSGLQ 584
Query: 591 KYLNEQGFHIVGYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNRNFEGRVHPLTRA 650
+YLNEQGF+IVGYGCTTCIGNSG+++ESV + IT+NDIVAAAVLSGNRNFEGRVHPLTRA
Sbjct: 585 EYLNEQGFNIVGYGCTTCIGNSGEINESVGAAITENDIVAAAVLSGNRNFEGRVHPLTRA 644
Query: 651 NYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTTEEIAEVVQSSVLPDM 710
NYLASPPLVVAYALAGTV+IDF+ EPIG K+GK V+ +DIWPTTEEIAEVVQSSVLPDM
Sbjct: 645 NYLASPPLVVAYALAGTVNIDFETEPIGKGKNGKDVFLRDIWPTTEEIAEVVQSSVLPDM 704
Query: 711 FKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCL 770
F++TYE+ITKGNP WN+LSVP + LYSWDPNSTYIHEPPYFKDMTMDPPG H VKDAYCL
Sbjct: 705 FRATYESITKGNPMWNKLSVPENTLYSWDPNSTYIHEPPYFKDMTMDPPGPHNVKDAYCL 764
Query: 771 LNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIR 830
LNFGDSITTDHISPAG+I KDSP AK+L+ERGV+R+DFNSYGSRRGNDE+MARGTFANIR
Sbjct: 765 LNFGDSITTDHISPAGNIQKDSPAAKFLMERGVDRKDFNSYGSRRGNDEIMARGTFANIR 824
Query: 831 LVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGP 890
+VNKL+NGEVGPKTVH+P+GEKLSVFDAAM+YKS+G TIILAGAEYGSGSSRDWAAKGP
Sbjct: 825 IVNKLMNGEVGPKTVHIPSGEKLSVFDAAMRYKSSGEDTIILAGAEYGSGSSRDWAAKGP 884
Query: 891 ML 892
ML
Sbjct: 885 ML 886
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| TAIR|locus:2125354 ACO1 "AT4G35830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2116297 ACO2 "AT4G26970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-031118-76 aco1 "aconitase 1, soluble" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0279159 aco1 "aconitate hydratase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NY25 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q90875 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:87879 Aco1 "aconitase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q0VCU1 ACO1 "Cytoplasmic aconitate hydratase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MS05 ACO1 "Cytoplasmic aconitate hydratase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6YZX6 | ACOC_ORYSJ | 4, ., 2, ., 1, ., 3 | 0.8993 | 0.8813 | 0.8853 | yes | no |
| Q6G9K9 | ACON_STAAS | 4, ., 2, ., 1, ., 3 | 0.5573 | 0.8569 | 0.8579 | yes | no |
| P63433 | ACON_STAAM | 4, ., 2, ., 1, ., 3 | 0.5573 | 0.8569 | 0.8579 | yes | no |
| P09339 | ACON_BACSU | 4, ., 2, ., 1, ., 3 | 0.5710 | 0.8503 | 0.8437 | yes | no |
| Q90875 | ACOC_CHICK | 4, ., 2, ., 1, ., 3 | 0.6245 | 0.8736 | 0.8863 | yes | no |
| Q94A28 | ACO3M_ARATH | 4, ., 2, ., 1, ., 3 | 0.8047 | 0.9401 | 0.8522 | no | no |
| Q0VCU1 | ACOC_BOVIN | 4, ., 2, ., 1, ., 3 | 0.6194 | 0.8736 | 0.8863 | yes | no |
| Q68VV0 | ACON_RICTY | 4, ., 2, ., 1, ., 3 | 0.5565 | 0.8192 | 0.8416 | yes | no |
| Q92G90 | ACON_RICCN | 4, ., 2, ., 1, ., 3 | 0.5674 | 0.8226 | 0.8451 | yes | no |
| Q9SIB9 | ACO2M_ARATH | 4, ., 2, ., 1, ., 3 | 0.8681 | 0.9290 | 0.8464 | yes | no |
| Q9RTN7 | ACON_DEIRA | 4, ., 2, ., 1, ., 3 | 0.5610 | 0.8614 | 0.8576 | yes | no |
| P99148 | ACON_STAAN | 4, ., 2, ., 1, ., 3 | 0.5573 | 0.8569 | 0.8579 | yes | no |
| Q54X73 | ACOC_DICDI | 4, ., 2, ., 1, ., 3 | 0.6268 | 0.8747 | 0.8825 | yes | no |
| Q8NQ98 | ACON_CORGL | 4, ., 2, ., 1, ., 3 | 0.5098 | 0.8503 | 0.8168 | yes | no |
| P28271 | ACOC_MOUSE | 4, ., 2, ., 1, ., 3 | 0.6199 | 0.8747 | 0.8875 | yes | no |
| P49608 | ACOC_CUCMA | 4, ., 2, ., 1, ., 3 | 0.9245 | 0.8813 | 0.8853 | N/A | no |
| Q6GH55 | ACON_STAAR | 4, ., 2, ., 1, ., 3 | 0.5548 | 0.8569 | 0.8579 | yes | no |
| Q2A1K3 | ACON_FRATH | 4, ., 2, ., 1, ., 3 | 0.5530 | 0.8636 | 0.8313 | yes | no |
| Q42669 | ACOC_CUCMC | 4, ., 2, ., 1, ., 3 | 0.8426 | 0.7239 | 0.8547 | N/A | no |
| Q5HPJ0 | ACON_STAEQ | 4, ., 2, ., 1, ., 3 | 0.5586 | 0.8569 | 0.8579 | yes | no |
| Q01059 | ACOC_RABIT | 4, ., 2, ., 1, ., 3 | 0.6256 | 0.8547 | 0.8672 | yes | no |
| Q4UK20 | ACON_RICFE | 4, ., 2, ., 1, ., 3 | 0.5644 | 0.8192 | 0.8416 | yes | no |
| P63434 | ACON_STAAW | 4, ., 2, ., 1, ., 3 | 0.5573 | 0.8569 | 0.8579 | yes | no |
| Q9ZCF4 | ACON_RICPR | 4, ., 2, ., 1, ., 3 | 0.5530 | 0.8159 | 0.8382 | yes | no |
| Q42560 | ACO1_ARATH | 4, ., 2, ., 1, ., 3 | 0.8641 | 0.8813 | 0.8853 | no | no |
| P21399 | ACOC_HUMAN | 4, ., 2, ., 1, ., 3 | 0.6243 | 0.8547 | 0.8672 | yes | no |
| Q8CPC2 | ACON_STAES | 4, ., 2, ., 1, ., 3 | 0.5586 | 0.8569 | 0.8579 | yes | no |
| Q8FTA8 | ACON_COREF | 4, ., 2, ., 1, ., 3 | 0.5160 | 0.8503 | 0.8185 | yes | no |
| Q63270 | ACOC_RAT | 4, ., 2, ., 1, ., 3 | 0.6186 | 0.8747 | 0.8875 | yes | no |
| Q9I3F5 | ACON1_PSEAE | 4, ., 2, ., 1, ., 3 | 0.5770 | 0.8481 | 0.8406 | yes | no |
| A0QX20 | ACON_MYCS2 | 4, ., 2, ., 1, ., 3 | 0.5220 | 0.8547 | 0.8176 | yes | no |
| Q1RKD5 | ACON_RICBR | 4, ., 2, ., 1, ., 3 | 0.5557 | 0.8270 | 0.8429 | yes | no |
| P70920 | ACON_BRAJA | 4, ., 2, ., 1, ., 3 | 0.5587 | 0.8436 | 0.8399 | yes | no |
| Q59938 | ACON_STRMU | 4, ., 2, ., 1, ., 3 | 0.5450 | 0.8370 | 0.8502 | yes | no |
| Q23500 | ACOC_CAEEL | 4, ., 2, ., 1, ., 3 | 0.6216 | 0.8580 | 0.8726 | yes | no |
| P25516 | ACON1_ECOLI | 4, ., 2, ., 1, ., 3 | 0.5648 | 0.8414 | 0.8518 | N/A | no |
| Q6NH63 | ACON_CORDI | 4, ., 2, ., 1, ., 3 | 0.5179 | 0.8503 | 0.8211 | yes | no |
| P37032 | ACON_LEGPH | 4, ., 2, ., 1, ., 3 | 0.5734 | 0.8470 | 0.8574 | yes | no |
| Q4JVM4 | ACON_CORJK | 4, ., 2, ., 1, ., 3 | 0.5228 | 0.8492 | 0.8183 | yes | no |
| Q5HG69 | ACON_STAAC | 4, ., 2, ., 1, ., 3 | 0.5573 | 0.8569 | 0.8579 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.2.1 | 0.983 |
| 3rd Layer | 4.2.1.3 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | GSVIVG00027318001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (1009 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | GSVIVG00026043001 | • | • | 0.943 | |||||||
 | GSVIVG00023212001 | • | • | • | 0.926 | ||||||
 | GSVIVG00003727001 | • | • | • | 0.925 | ||||||
 | GSVIVG00011753001 | • | • | • | 0.915 | ||||||
 | GSVIVG00036195001 | • | • | • | 0.914 | ||||||
 | GSVIVG00002132001 | • | • | 0.911 | |||||||
 | GSVIVG00023479001 | • | • | 0.911 | |||||||
 | GSVIVG00038599001 | • | 0.899 | ||||||||
 | GSVIVG00033143001 | • | 0.899 | ||||||||
 | GSVIVG00022538001 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 902 | |||
| PLN00070 | 936 | PLN00070, PLN00070, aconitate hydratase | 0.0 | |
| PTZ00092 | 898 | PTZ00092, PTZ00092, aconitate hydratase-like prote | 0.0 | |
| PRK09277 | 888 | PRK09277, PRK09277, aconitate hydratase; Validated | 0.0 | |
| TIGR01341 | 876 | TIGR01341, aconitase_1, aconitate hydratase 1 | 0.0 | |
| PRK12881 | 889 | PRK12881, acnA, aconitate hydratase; Provisional | 0.0 | |
| COG1048 | 861 | COG1048, AcnA, Aconitase A [Energy production and | 0.0 | |
| cd01586 | 404 | cd01586, AcnA_IRP, Aconitase A catalytic domain | 0.0 | |
| TIGR02333 | 858 | TIGR02333, 2met_isocit_dHY, 2-methylisocitrate deh | 0.0 | |
| pfam00330 | 464 | pfam00330, Aconitase, Aconitase family (aconitate | 1e-162 | |
| cd01351 | 389 | cd01351, Aconitase, Aconitase catalytic domain; Ac | 2e-92 | |
| cd01580 | 171 | cd01580, AcnA_IRP_Swivel, Aconitase A swivel domai | 2e-73 | |
| TIGR01340 | 745 | TIGR01340, aconitase_mito, aconitate hydratase, mi | 6e-60 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 9e-59 | |
| cd01584 | 412 | cd01584, AcnA_Mitochondrial, Aconitase catalyzes t | 4e-55 | |
| cd01585 | 380 | cd01585, AcnA_Bact, Aconitase catalyzes the revers | 2e-52 | |
| TIGR01342 | 658 | TIGR01342, acon_putative, aconitate hydratase, put | 8e-50 | |
| cd01583 | 382 | cd01583, IPMI, 3-isopropylmalate dehydratase catal | 5e-48 | |
| COG0065 | 423 | COG0065, LeuC, 3-isopropylmalate dehydratase large | 8e-42 | |
| pfam00694 | 131 | pfam00694, Aconitase_C, Aconitase C-terminal domai | 4e-37 | |
| TIGR02086 | 412 | TIGR02086, IPMI_arch, 3-isopropylmalate dehydratas | 2e-32 | |
| TIGR02083 | 419 | TIGR02083, LEU2, 3-isopropylmalate dehydratase, la | 4e-32 | |
| PRK00402 | 418 | PRK00402, PRK00402, 3-isopropylmalate dehydratase | 3e-31 | |
| TIGR01343 | 412 | TIGR01343, hacA_fam, homoaconitate hydratase famil | 1e-30 | |
| PRK12466 | 471 | PRK12466, PRK12466, isopropylmalate isomerase larg | 6e-30 | |
| TIGR00170 | 465 | TIGR00170, leuC, 3-isopropylmalate dehydratase, la | 8e-28 | |
| cd01582 | 363 | cd01582, Homoaconitase, Homoaconitase and other un | 4e-26 | |
| TIGR00139 | 712 | TIGR00139, h_aconitase, homoaconitase | 7e-26 | |
| PRK05478 | 466 | PRK05478, PRK05478, isopropylmalate isomerase larg | 6e-14 | |
| cd01581 | 436 | cd01581, AcnB, Aconitate hydratase B catalyses the | 1e-10 | |
| COG1049 | 852 | COG1049, AcnB, Aconitase B [Energy production and | 7e-10 | |
| PRK11413 | 751 | PRK11413, PRK11413, putative hydratase; Provisiona | 7e-10 | |
| TIGR00117 | 844 | TIGR00117, acnB, aconitate hydratase 2 | 1e-08 | |
| PRK05478 | 466 | PRK05478, PRK05478, isopropylmalate isomerase larg | 2e-06 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 1e-05 | |
| PRK09238 | 835 | PRK09238, PRK09238, bifunctional aconitate hydrata | 3e-05 | |
| cd01579 | 121 | cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-lik | 5e-05 | |
| cd01578 | 149 | cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconi | 2e-04 | |
| PLN00094 | 938 | PLN00094, PLN00094, aconitate hydratase 2; Provisi | 2e-04 | |
| cd00404 | 88 | cd00404, Aconitase_swivel, Aconitase swivel domain | 0.003 |
| >gnl|CDD|215047 PLN00070, PLN00070, aconitate hydratase | Back alignment and domain information |
|---|
Score = 1835 bits (4754), Expect = 0.0
Identities = 747/820 (91%), Positives = 786/820 (95%)
Query: 74 SPLSLRAQIRTVAPAIERLERAFATMAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPR 133
SP SLRAQIR +P IER +R FA+MA+E+PFK ILT+LPKPGGGEFGK+YSLPALNDPR
Sbjct: 14 SPFSLRAQIRAASPVIERFQRKFASMASENPFKGILTSLPKPGGGEFGKYYSLPALNDPR 73
Query: 134 IEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGV 193
I+KLPYSIRILLESAIRNCDNFQV KEDVEKIIDWEN++PKQVEIPFKPARVLLQDFTGV
Sbjct: 74 IDKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWENTSPKQVEIPFKPARVLLQDFTGV 133
Query: 194 PAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNK 253
PAVVDLACMRDAMN LG D NKINPLVPVDLVIDHSVQVDV RSENAV+ANMELEFQRNK
Sbjct: 134 PAVVDLACMRDAMNNLGGDPNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNK 193
Query: 254 ERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMI 313
ERFAFLKWGS+AF NMLVVPPGSGIVHQVNLEYLGRVVFNT+G+LYPDSVVGTDSHTTMI
Sbjct: 194 ERFAFLKWGSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTDGILYPDSVVGTDSHTTMI 253
Query: 314 DGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKH 373
DGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKL +GVTATDLVLTVTQMLRKH
Sbjct: 254 DGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKH 313
Query: 374 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVA 433
GVVGKFVEF+G+GM ELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVA
Sbjct: 314 GVVGKFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVA 373
Query: 434 MVEGYLRANKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHS 493
M+E YLRANKMFVDYNEPQQERVYSSYLEL+L DVEPCISGPKRPHDRVPLKEMKADWHS
Sbjct: 374 MIEAYLRANKMFVDYNEPQQERVYSSYLELDLEDVEPCISGPKRPHDRVPLKEMKADWHS 433
Query: 494 CLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGL 553
CLDNKVGFKGFAVPKE Q KV KFSFHGQPAEL+HGSVVIAAITSCTNTSNPSVMLGAGL
Sbjct: 434 CLDNKVGFKGFAVPKEAQSKVAKFSFHGQPAELRHGSVVIAAITSCTNTSNPSVMLGAGL 493
Query: 554 VAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSG 613
VAKKACELGL+VKPW+KTSLAPGSGVVTKYLL+SGLQKYLN+QGFHIVGYGCTTCIGNSG
Sbjct: 494 VAKKACELGLEVKPWIKTSLAPGSGVVTKYLLKSGLQKYLNQQGFHIVGYGCTTCIGNSG 553
Query: 614 DLDESVASTITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFD 673
+LDESVAS IT+NDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDF+
Sbjct: 554 ELDESVASAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFE 613
Query: 674 KEPIGTTKDGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPAS 733
KEPIGT KDGK V+F+DIWP+ EE+AEVVQSSVLPDMFKSTYEAITKGNP WNQLSVP+
Sbjct: 614 KEPIGTGKDGKDVFFRDIWPSNEEVAEVVQSSVLPDMFKSTYEAITKGNPMWNQLSVPSG 673
Query: 734 KLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSP 793
LYSWDP STYIHEPPYFK+MTM PPG HGVKDAYCLLNFGDSITTDHISPAGSIHKDSP
Sbjct: 674 TLYSWDPKSTYIHEPPYFKNMTMSPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSP 733
Query: 794 TAKYLLERGVERRDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPTGEKL 853
AKYL+ERGV+R+DFNSYGSRRGNDE+MARGTFANIR+VNKLL GEVGPKTVH+PTGEKL
Sbjct: 734 AAKYLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLLKGEVGPKTVHIPTGEKL 793
Query: 854 SVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLL 893
SVFDAAMKYKS GH TIILAGAEYGSGSSRDWAAKGPMLL
Sbjct: 794 SVFDAAMKYKSEGHDTIILAGAEYGSGSSRDWAAKGPMLL 833
|
Length = 936 |
| >gnl|CDD|240263 PTZ00092, PTZ00092, aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236445 PRK09277, PRK09277, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|233363 TIGR01341, aconitase_1, aconitate hydratase 1 | Back alignment and domain information |
|---|
| >gnl|CDD|237246 PRK12881, acnA, aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223977 COG1048, AcnA, Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|153136 cd01586, AcnA_IRP, Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|131386 TIGR02333, 2met_isocit_dHY, 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >gnl|CDD|215861 pfam00330, Aconitase, Aconitase family (aconitate hydratase) | Back alignment and domain information |
|---|
| >gnl|CDD|153129 cd01351, Aconitase, Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|238812 cd01580, AcnA_IRP_Swivel, Aconitase A swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|233362 TIGR01340, aconitase_mito, aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|153134 cd01584, AcnA_Mitochondrial, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|153135 cd01585, AcnA_Bact, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|130409 TIGR01342, acon_putative, aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >gnl|CDD|153133 cd01583, IPMI, 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >gnl|CDD|223143 COG0065, LeuC, 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|201399 pfam00694, Aconitase_C, Aconitase C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|233715 TIGR02086, IPMI_arch, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131138 TIGR02083, LEU2, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|234748 PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|130410 TIGR01343, hacA_fam, homoaconitate hydratase family protein | Back alignment and domain information |
|---|
| >gnl|CDD|183543 PRK12466, PRK12466, isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|232854 TIGR00170, leuC, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|153132 cd01582, Homoaconitase, Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >gnl|CDD|129245 TIGR00139, h_aconitase, homoaconitase | Back alignment and domain information |
|---|
| >gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|153131 cd01581, AcnB, Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|223978 COG1049, AcnB, Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|183125 PRK11413, PRK11413, putative hydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|129223 TIGR00117, acnB, aconitate hydratase 2 | Back alignment and domain information |
|---|
| >gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|236424 PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|238811 cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238810 cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|215053 PLN00094, PLN00094, aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238236 cd00404, Aconitase_swivel, Aconitase swivel domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 902 | |||
| KOG0452 | 892 | consensus RNA-binding translational regulator IRP | 100.0 | |
| PLN00070 | 936 | aconitate hydratase | 100.0 | |
| PTZ00092 | 898 | aconitate hydratase-like protein; Provisional | 100.0 | |
| TIGR01341 | 876 | aconitase_1 aconitate hydratase 1. This model repr | 100.0 | |
| PRK12881 | 889 | acnA aconitate hydratase; Provisional | 100.0 | |
| PRK09277 | 888 | aconitate hydratase; Validated | 100.0 | |
| TIGR02333 | 858 | 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe | 100.0 | |
| COG1048 | 861 | AcnA Aconitase A [Energy production and conversion | 100.0 | |
| TIGR01340 | 745 | aconitase_mito aconitate hydratase, mitochondrial. | 100.0 | |
| PRK07229 | 646 | aconitate hydratase; Validated | 100.0 | |
| TIGR01342 | 658 | acon_putative aconitate hydratase, putative, Aquif | 100.0 | |
| KOG0453 | 778 | consensus Aconitase/homoaconitase (aconitase super | 100.0 | |
| TIGR00139 | 712 | h_aconitase homoaconitase. Homoaconitase, aconitas | 100.0 | |
| PRK11413 | 751 | putative hydratase; Provisional | 100.0 | |
| cd01586 | 404 | AcnA_IRP Aconitase A catalytic domain. Aconitase A | 100.0 | |
| TIGR00170 | 465 | leuC 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| PRK12466 | 471 | isopropylmalate isomerase large subunit; Provision | 100.0 | |
| PF00330 | 465 | Aconitase: Aconitase family (aconitate hydratase); | 100.0 | |
| PRK05478 | 466 | isopropylmalate isomerase large subunit; Validated | 100.0 | |
| cd01584 | 412 | AcnA_Mitochondrial Aconitase catalyzes the reversi | 100.0 | |
| cd01583 | 382 | IPMI 3-isopropylmalate dehydratase catalyzes the i | 100.0 | |
| TIGR01343 | 412 | hacA_fam homoaconitate hydratase family protein. T | 100.0 | |
| PRK00402 | 418 | 3-isopropylmalate dehydratase large subunit; Revie | 100.0 | |
| cd01585 | 380 | AcnA_Bact Aconitase catalyzes the reversible isome | 100.0 | |
| TIGR02086 | 412 | IPMI_arch 3-isopropylmalate dehydratase, large sub | 100.0 | |
| TIGR02083 | 419 | LEU2 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| COG0065 | 423 | LeuC 3-isopropylmalate dehydratase large subunit [ | 100.0 | |
| cd01581 | 436 | AcnB Aconitate hydratase B catalyses the formation | 100.0 | |
| cd01582 | 363 | Homoaconitase Homoaconitase and other uncharacteri | 100.0 | |
| cd01351 | 389 | Aconitase Aconitase catalytic domain; Aconitase ca | 100.0 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 100.0 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 100.0 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 100.0 | |
| cd01580 | 171 | AcnA_IRP_Swivel Aconitase A swivel domain. This is | 100.0 | |
| COG1049 | 852 | AcnB Aconitase B [Energy production and conversion | 100.0 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 100.0 | |
| cd01578 | 149 | AcnA_Mitochon_Swivel Mitochondrial aconitase A swi | 99.94 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 99.9 | |
| PF00694 | 131 | Aconitase_C: Aconitase C-terminal domain CAUTION: | 99.87 | |
| cd01579 | 121 | AcnA_Bact_Swivel Bacterial Aconitase-like swivel d | 99.75 | |
| COG0066 | 191 | LeuD 3-isopropylmalate dehydratase small subunit [ | 99.74 | |
| TIGR02084 | 156 | leud 3-isopropylmalate dehydratase, small subunit. | 99.74 | |
| PRK14023 | 166 | homoaconitate hydratase small subunit; Provisional | 99.74 | |
| PRK00439 | 163 | leuD 3-isopropylmalate dehydratase small subunit; | 99.73 | |
| TIGR02087 | 154 | LEUD_arch 3-isopropylmalate dehydratase, small sub | 99.72 | |
| PRK01641 | 200 | leuD isopropylmalate isomerase small subunit; Prov | 99.67 | |
| TIGR00171 | 188 | leuD 3-isopropylmalate dehydratase, small subunit. | 99.65 | |
| PLN00072 | 246 | 3-isopropylmalate isomerase/dehydratase small subu | 99.65 | |
| cd00404 | 88 | Aconitase_swivel Aconitase swivel domain. Aconitas | 99.57 | |
| cd01674 | 129 | Homoaconitase_Swivel Homoaconitase swivel domain. | 99.56 | |
| cd01577 | 91 | IPMI_Swivel Aconatase-like swivel domain of 3-isop | 99.56 | |
| cd01576 | 131 | AcnB_Swivel Aconitase B swivel domain. Aconitate h | 99.34 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 99.26 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 98.9 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 97.66 | |
| PF04412 | 400 | DUF521: Protein of unknown function (DUF521); Inte | 95.79 | |
| COG1679 | 403 | Predicted aconitase [General function prediction o | 93.12 | |
| cd01355 | 389 | AcnX Putative Aconitase X catalytic domain. Putati | 88.76 | |
| PF06434 | 204 | Aconitase_2_N: Aconitate hydratase 2 N-terminus; I | 88.66 |
| >KOG0452 consensus RNA-binding translational regulator IRP (aconitase superfamily) [RNA processing and modification; Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-266 Score=2160.92 Aligned_cols=796 Identities=72% Similarity=1.188 Sum_probs=785.3
Q ss_pred cCCchhhhcccccCCCCCceeeeeecCCCCCCCCCCCCceeeeehhhhhcccCCccccHHHHHHHHhcccCCCCccEEee
Q 002599 101 AEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPF 180 (902)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lP~sirvllE~~~R~~d~~~~~~~~vekil~~~~~~~~~~eI~~ 180 (902)
+++||+...++|+..++ .++||+|++|+ .++++||||||||||+++||||++.+++++||+||+|+..+.+..||+|
T Consensus 5 ~~~~f~~~~~~l~~~~~--~~kyf~l~~l~-~ryd~LP~SIrvLLEsAvRnCD~f~v~k~DVe~IldW~~t~~k~vEvpF 81 (892)
T KOG0452|consen 5 SENPFAQLIETLPKPGG--VYKYFDLPKLN-SRYDKLPYSIRVLLESAVRNCDNFHVKKKDVENILDWKNTQKKQVEVPF 81 (892)
T ss_pred ccccHHHHHhccCCCCC--cceeeeccccc-cccccCchhHHHHHHHHHhcCccceeeHHHHHHHhCccccCccceeecc
Confidence 46899888889998764 79999999998 7899999999999999999999999999999999999988888899999
Q ss_pred ecceeeeecCccHHHHHHHHHHHHHHHHcCCCCCccCCCCCEEEEecCCCCCCCccchHHHHHhhHHHHHHhhhhhhhhh
Q 002599 181 KPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLK 260 (902)
Q Consensus 181 ~pdrVl~qD~TG~pa~vdlaamr~~~~~~G~dp~~inP~~pv~lviDHsv~~d~~~~~~a~~~n~~~ef~rN~ery~flk 260 (902)
+|+||++|||||+||+||||+|||+++++|+||+||||.+|+|||||||+|+|+.++++|+++|+..||+||+|||.|||
T Consensus 82 kPARViLQDFTGvPavVD~AaMRdAv~~lGgdp~KinP~cP~DLviDHSvQvDf~r~~~alqkN~~lEF~RNkERf~FlK 161 (892)
T KOG0452|consen 82 KPARVILQDFTGVPAVVDFAAMRDAVKNLGGDPEKINPLCPVDLVIDHSVQVDFARSADALQKNQELEFERNKERFTFLK 161 (892)
T ss_pred ccceeeeecccCCchheeHHHHHHHHHHcCCCHHHcCCCCCcceEeeeeeEEeeccCHHHHhhcceeeeecchhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccceeeCCCCcccceeeccccceeeecCCCcccCCeEEecCCCCcccCcccceecccCHHHHHHHHcCCcEEee
Q 002599 261 WGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMV 340 (902)
Q Consensus 261 w~~~~f~~i~v~ppG~GI~HQV~lE~la~vv~~~~G~~~PdtvVGtDSHT~~~GgLG~lg~GVGg~Eaeaamlg~p~~l~ 340 (902)
|++++|+|+.++|||+||+|||||||||||||++++++|||++|||||||||++|||++||||||||+|++|+|||++|.
T Consensus 162 Wgs~af~NmlivPPGsGivHQvNLEYLaRvVF~~~~~lyPDSvVGTDSHtTMidGlGvlGWGVGGIEaEAvMLGqpiSmv 241 (892)
T KOG0452|consen 162 WGSRAFDNMLIVPPGSGIVHQVNLEYLARVVFESKDLLYPDSVVGTDSHTTMIDGLGVLGWGVGGIEAEAVMLGQPISMV 241 (892)
T ss_pred hhhHhhcceEEeCCCCceeEEeehhhhhheeeccCceecccccccccCcceeecccceeeccccceehhhhhhcCchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEEEEeccCCCCCChhcHHHHHHHHHHhcCcccEEEEEecCcccCCChhhhhhhhccccccCcceeeeeCCHHHHH
Q 002599 341 LPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQ 420 (902)
Q Consensus 341 vPevVgV~LtG~L~~GVtAkDliL~i~~~Lr~~G~vgk~VEF~G~Gv~~LSv~dRaTIaNMa~E~GAt~g~Fp~De~Tl~ 420 (902)
+|+|||++|+|+|.++||++||+|+||++||+.|++||||||||+|+++||++||+||+||+||||||.||||+|+.|++
T Consensus 242 lP~ViG~~L~Gkl~~~vTstDlVLtiTk~LRq~GVvGKFVEF~G~Gva~LSiaDRaTIaNMcPEYGAt~gfFPvD~vtl~ 321 (892)
T KOG0452|consen 242 LPEVIGYKLTGKLSPLVTSTDLVLTITKHLRQLGVVGKFVEFFGPGVAELSIADRATIANMCPEYGATMGFFPVDEVTLQ 321 (892)
T ss_pred cccceeEEeccccCCCceeehhhhhHHHHHHHhccceeeEEEecCccceechhhhhhhhhcCccccceeeeeccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCChhHHHHHHHHHHHccccccCCCCCCCCcccEEEEEEcCCccccccCCCCCCCcccccccccchhhhhccccc
Q 002599 421 YLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVG 500 (902)
Q Consensus 421 YL~~tgR~~~~~~l~e~y~~~~~l~~~~~~~D~~a~Y~~vieiDLs~veP~VAgP~~P~~~v~vse~~~~~~~~l~~~~~ 500 (902)
||++|||+++.++.+|.|+|+.++|+++..++.++.|++++++||++|+|+|+||+||||+++|++|+.+|+.||.++++
T Consensus 322 yl~~Tgrs~~~~~~i~~yLka~~~f~~~~~~~q~p~yt~~l~l~L~~vvp~vSGPKRPhDrV~v~dmk~Df~scL~~~vg 401 (892)
T KOG0452|consen 322 YLKQTGRSEEKLDIIEKYLKAVKMFRDYNDPSQDPVYTQVLELDLGTVVPSVSGPKRPHDRVAVSDMKADFHSCLDSKVG 401 (892)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHhhhhhccCcccCcceeeEEEEecCceeeccCCCCCCccccchhhHHHHHHHhhcCccc
Confidence 99999999999999999999999999988888899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccceeeeecCCCcccccCCcEEEEEeccCCCCCChHHHHHHHHHHHHHHhcCCccCCceeEEEecCcHHH
Q 002599 501 FKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVV 580 (902)
Q Consensus 501 ~~g~~i~~~~~~~~~~~~~~g~~~~l~~g~V~~a~IGSCTN~s~~dl~~aA~lLak~A~~kGlkV~p~Vkt~vaPGS~~V 580 (902)
|||+.++++.+++.+++.|+|++++|.||+|+||+|+||||+|||++|++|++|||||+++|++|+||+||+++|||.+|
T Consensus 402 FKgFai~~e~q~~~v~f~~~g~~~~l~HGsVVIAAitSCTNtsNPSVMlgAgLlAKkAv~~GL~v~PyikTSLsPGSgvV 481 (892)
T KOG0452|consen 402 FKGFAIAPEAQSKSVEFQYDGTTAKLKHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVELGLNVKPYIKTSLSPGSGVV 481 (892)
T ss_pred ccccccChhHhhceEEEEECCeeeEeccCcEEEEEEecccCCCCcHHhhhhhHHHHHHHhcCceecceeecccCCCCchh
Confidence 99999999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCcHHHHHhcCcEEeccCcccccCCCCCCChhhhccccCCCeeEEEeeccCCCCCCCCCCCCCceEecCHHHHH
Q 002599 581 TKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVV 660 (902)
Q Consensus 581 ~~~l~~~Gll~~L~~aGf~i~~~GCg~CiGn~g~l~~~~~~~i~~~~l~~~~VsS~NRNF~GR~gp~~~~~YLASP~lVa 660 (902)
+.||.++|++++|+++||.|+||||+|||||+|+|++++..+|.+|++++++|+|||||||||+||.+++||||||+||+
T Consensus 482 t~YL~~SGv~pyL~klGF~IvGYGC~TCiGNsgpl~e~V~~ai~~ndlV~~gvLSGNrNFEGRvhp~tRANYLASPpLvv 561 (892)
T KOG0452|consen 482 TKYLSESGVLPYLEKLGFDIVGYGCMTCIGNSGPLDEAVVNAIEQNDLVAAGVLSGNRNFEGRVHPNTRANYLASPPLVV 561 (892)
T ss_pred hhhhhhccchhHHHhcCceeeccccceeccCCCCCCHHHHHhhhcCCeEEEEEeecCCCccccccccchhhhccCchHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCccccCCCCCCcccCCCCCeeeccCCCCChhhHHHHhhccCCccccccccccccCCCcccccccCCCCCccccCC
Q 002599 661 AYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDP 740 (902)
Q Consensus 661 A~AlaG~I~~d~~~eplg~~~~G~~v~l~diwP~~~Ei~~~~~~~v~~~~f~~~y~~i~~~~~~w~~l~~~~~~~~~wd~ 740 (902)
||||||+++|||++||||++++||.|||+||||+++||++++++.|.|+||++.|+.|..|++.||+|++|++.+|+||+
T Consensus 562 aYaiaGtV~IDfe~eplg~~~~Gk~vfl~DIWPtr~Ev~~ve~~~Vip~mFk~~y~~I~~gn~~Wn~L~~p~~~Ly~Wd~ 641 (892)
T KOG0452|consen 562 AYAIAGTVNIDFETEPLGVDPDGKNVFLRDIWPTREEVAEVEEEHVIPSMFKEVYEKIELGNPDWNQLEVPSSKLYPWDP 641 (892)
T ss_pred hhhhcceeecceeccccccCCCCCeEEEeecCCCHHHHHHHHHhcccHHHHHHHHHHHhhcChhhhhccCCccceeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCCCCCCCCCCCCccccEEEEecCCCcccCcccCCCCCCCCChHHhHHHhhCCCccccccccCCCCchhh
Q 002599 741 NSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGSRRGNDEV 820 (902)
Q Consensus 741 ~styi~~pp~f~~~~~~~~~~~~i~~a~vL~~~gd~itTDhIsPAg~i~~~s~a~~yL~~~G~~~~~~nsygsrRgN~ev 820 (902)
+||||++||||++|+.+++.+++|++|+||+.+||+||||||||||+|.++|||+|||.+||++|+|||||||||||++|
T Consensus 642 ~STYI~~ppfF~~mT~~~p~~~~i~~A~~LLnlGDSvTTDHISPAGsI~r~SpAAr~L~~Rg~tprdFNsYGsRRGND~v 721 (892)
T KOG0452|consen 642 KSTYIKEPPFFEGMTRDLPGPQSIEDAYCLLNLGDSVTTDHISPAGSIARTSPAARYLTERGLTPRDFNSYGSRRGNDAV 721 (892)
T ss_pred CCceecCCccccccccCCCCcccccceeEEEeccCcccccccCCCccccccCHHHHHHHhcCCChhhccccccccCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccchhhhhhccCCCCCCceeecCCCcccchHHHHHHHHhcCCceEEEecCccCCCcchhhhhcccccccceEEee
Q 002599 821 MARGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLVSLFIWP 900 (902)
Q Consensus 821 M~rgtF~nir~~n~~~~~~~g~~t~~~~~g~~~~i~~~a~~y~~~~~p~iivaG~nyG~GSSRe~Aa~~~~~lGv~aVIa 900 (902)
|.||||+|||+.|+++. +.||.|+|.|+||.++|||||++||++|+|+||+||++||+|||||||||||.|||||||||
T Consensus 722 MaRGTFANIrlvNkl~~-k~gP~TvHiPsge~ldvFdAA~~Y~~~g~p~iilaGkeYGsGsSRDWAAKGP~LlGvKAVia 800 (892)
T KOG0452|consen 722 MARGTFANIRLVNKLLS-KVGPKTVHIPSGEELDVFDAAERYKSEGIPLIILAGKEYGSGSSRDWAAKGPFLLGVKAVIA 800 (892)
T ss_pred hhcccchhhHHHHHHhc-ccCCceEecCCCCeecHhhHHHHHHhcCCceEEEeccccCCCCccchhhcCchhhhhHHHHH
Confidence 99999999999999995 89999999999999999999999999999999999999999999999999999999999997
|
|
| >PLN00070 aconitate hydratase | Back alignment and domain information |
|---|
| >PTZ00092 aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01341 aconitase_1 aconitate hydratase 1 | Back alignment and domain information |
|---|
| >PRK12881 acnA aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >PRK09277 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR02333 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >COG1048 AcnA Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01340 aconitase_mito aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >PRK07229 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR01342 acon_putative aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >KOG0453 consensus Aconitase/homoaconitase (aconitase superfamily) [Energy production and conversion; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00139 h_aconitase homoaconitase | Back alignment and domain information |
|---|
| >PRK11413 putative hydratase; Provisional | Back alignment and domain information |
|---|
| >cd01586 AcnA_IRP Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >TIGR00170 leuC 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >PRK12466 isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >PF00330 Aconitase: Aconitase family (aconitate hydratase); InterPro: IPR001030 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
| >PRK05478 isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >cd01584 AcnA_Mitochondrial Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01583 IPMI 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >TIGR01343 hacA_fam homoaconitate hydratase family protein | Back alignment and domain information |
|---|
| >PRK00402 3-isopropylmalate dehydratase large subunit; Reviewed | Back alignment and domain information |
|---|
| >cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >TIGR02086 IPMI_arch 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >TIGR02083 LEU2 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01581 AcnB Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01582 Homoaconitase Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >cd01351 Aconitase Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >cd01580 AcnA_IRP_Swivel Aconitase A swivel domain | Back alignment and domain information |
|---|
| >COG1049 AcnB Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01578 AcnA_Mitochon_Swivel Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF00694 Aconitase_C: Aconitase C-terminal domain CAUTION: The Prosite patterns do not match this domain | Back alignment and domain information |
|---|
| >cd01579 AcnA_Bact_Swivel Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >COG0066 LeuD 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02084 leud 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PRK14023 homoaconitate hydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >PRK00439 leuD 3-isopropylmalate dehydratase small subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR02087 LEUD_arch 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PRK01641 leuD isopropylmalate isomerase small subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00171 leuD 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PLN00072 3-isopropylmalate isomerase/dehydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >cd00404 Aconitase_swivel Aconitase swivel domain | Back alignment and domain information |
|---|
| >cd01674 Homoaconitase_Swivel Homoaconitase swivel domain | Back alignment and domain information |
|---|
| >cd01577 IPMI_Swivel Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins | Back alignment and domain information |
|---|
| >cd01576 AcnB_Swivel Aconitase B swivel domain | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins | Back alignment and domain information |
|---|
| >COG1679 Predicted aconitase [General function prediction only] | Back alignment and domain information |
|---|
| >cd01355 AcnX Putative Aconitase X catalytic domain | Back alignment and domain information |
|---|
| >PF06434 Aconitase_2_N: Aconitate hydratase 2 N-terminus; InterPro: IPR015929 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 902 | ||||
| 2b3x_A | 888 | Structure Of An Orthorhombic Crystal Form Of Human | 0.0 | ||
| 3snp_A | 908 | Crystal Structure Analysis Of Iron Regulatory Prote | 0.0 | ||
| 1aco_A | 754 | Crystal Structure Of Aconitase With Transaconitate | 2e-41 | ||
| 1ami_A | 754 | Steric And Conformational Features Of The Aconitase | 2e-41 | ||
| 1nis_A | 754 | Crystal Structure Of Aconitase With Trans-Aconitate | 4e-41 | ||
| 5acn_A | 754 | Structure Of Activated Aconitase. Formation Of The | 6e-41 | ||
| 1c96_A | 753 | S642a:citrate Complex Of Aconitase Length = 753 | 7e-41 | ||
| 1b0j_A | 754 | Crystal Structure Of Aconitase With Isocitrate Leng | 1e-40 | ||
| 1c97_A | 753 | S642a:isocitrate Complex Of Aconitase Length = 753 | 1e-40 | ||
| 1b0m_A | 753 | Aconitase R644q:fluorocitrate Complex Length = 753 | 2e-40 |
| >pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human Cytosolic Aconitase (Irp1) Length = 888 | Back alignment and structure |
|
| >pdb|3SNP|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In Complex With Ferritin H Ire Rna Length = 908 | Back alignment and structure |
| >pdb|1ACO|A Chain A, Crystal Structure Of Aconitase With Transaconitate Bound Length = 754 | Back alignment and structure |
| >pdb|1AMI|A Chain A, Steric And Conformational Features Of The Aconitase Mechanism Length = 754 | Back alignment and structure |
| >pdb|1NIS|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And Nitrocitrate Bound Length = 754 | Back alignment and structure |
| >pdb|5ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The (4fe-4s) Cluster In The Crystal Length = 754 | Back alignment and structure |
| >pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate Length = 754 | Back alignment and structure |
| >pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex Length = 753 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A Length = 888 | Back alignment and structure |
|---|
Score = 1559 bits (4039), Expect = 0.0
Identities = 486/791 (61%), Positives = 601/791 (75%), Gaps = 3/791 (0%)
Query: 103 HPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDV 162
+PF + L G+ KF++L L D R +LP+SIR+LLE+AIRNCD F VKK+D+
Sbjct: 2 NPFAHLAEPLDPVQPGK--KFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDI 59
Query: 163 EKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPV 222
E I+ W + K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLG D KINP+ P
Sbjct: 60 ENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPA 119
Query: 223 DLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQV 282
DLVIDHS+QVD R ++++ N +LEF+RN+ERF FLKWGS AFHNM ++PPGSGI+HQV
Sbjct: 120 DLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQV 179
Query: 283 NLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLP 342
NLEYL RVVF+ +G YPDS+VGTDSHTTMIDGLG+ GWGVGGIEAEA MLGQP+SMVLP
Sbjct: 180 NLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLP 239
Query: 343 GVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIANMS 402
V+G++L GK H VT+TD+VLT+T+ LR+ GVVGKFVEF G G+ +LS+ADRATIANM
Sbjct: 240 QVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMC 299
Query: 403 PEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSSYLE 462
PEYGAT FFPVD V++ YL TGR +E + ++ YL+A MF D+N+P Q+ ++ +E
Sbjct: 300 PEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVE 359
Query: 463 LNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQ 522
L+L V PC SGPKRP D+V + +MK D+ SCL K GFKGF V E F +
Sbjct: 360 LDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNT 419
Query: 523 PAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTK 582
L HGSVVIAAITSCTNTSNPSVMLGAGL+AKKA + GL V P++KTSL+PGSGVVT
Sbjct: 420 EFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTY 479
Query: 583 YLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNRNFEG 642
YL +SG+ YL++ GF +VGYGC TCIGNSG L E V IT D+VA VLSGNRNFEG
Sbjct: 480 YLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEG 539
Query: 643 RVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTTEEIAEVV 702
RVHP TRANYLASPPLV+AYA+AGT+ IDF+KEP+G G+ V+ KDIWPT +EI V
Sbjct: 540 RVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVE 599
Query: 703 QSSVLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAH 762
+ V+P MFK Y+ I N +WN L+ P+ KL+ W+ STYI PP+F+++T+D
Sbjct: 600 RQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSKSTYIKSPPFFENLTLDLQPPK 659
Query: 763 GVKDAYCLLNFGDSITTDHISPAGSIHKDSPTAKYLLERGVERRDFNSYGSRRGNDEVMA 822
+ DAY LLN GDS+TTDHISPAG+I ++SP A+YL RG+ R+FNSYGSRRGND VMA
Sbjct: 660 SIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMA 719
Query: 823 RGTFANIRLVNKLLNGEVGPKTVHVPTGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSS 882
RGTFANIRL+N+ LN + P+T+H+P+GE L VFDAA +Y+ AG I+LAG EYG+GSS
Sbjct: 720 RGTFANIRLLNRFLNKQ-APQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSS 778
Query: 883 RDWAAKGPMLL 893
RDWAAKGP LL
Sbjct: 779 RDWAAKGPFLL 789
|
| >1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A Length = 753 | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Length = 865 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 Length = 163 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 902 | ||||
| d2b3ya2 | 629 | c.83.1.1 (A:2-630) Iron-responsive element binding | 0.0 | |
| d1acoa2 | 527 | c.83.1.1 (A:2-528) Aconitase A, N-terminal domain | 1e-117 | |
| d1l5ja3 | 490 | c.83.1.1 (A:373-862) Aconitase B, C-terminal domai | 7e-71 | |
| d2b3ya1 | 259 | c.8.2.1 (A:631-889) ron-responsive element binding | 4e-59 | |
| d1acoa1 | 226 | c.8.2.1 (A:529-754) Aconitase A, C-terminal domain | 6e-29 | |
| d1v7la_ | 162 | c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyroc | 4e-06 |
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 629 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aconitase iron-sulfur domain superfamily: Aconitase iron-sulfur domain family: Aconitase iron-sulfur domain domain: Iron-responsive element binding protein 1, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 746 bits (1927), Expect = 0.0
Identities = 386/630 (61%), Positives = 475/630 (75%), Gaps = 2/630 (0%)
Query: 103 HPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDV 162
+PF + L G+ KF++L L D R +LP+SIR+LLE+AIRNCD F VKK+D+
Sbjct: 2 NPFAHLAEPLDPVQPGK--KFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDI 59
Query: 163 EKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPV 222
E I+ W + K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLG D KINP+ P
Sbjct: 60 ENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPA 119
Query: 223 DLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQV 282
DLVIDHS+QVD R ++++ N +LEF+RN+ERF FLKWGS AFHNM ++PPGSGI+HQV
Sbjct: 120 DLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQV 179
Query: 283 NLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLP 342
NLEYL RVVF+ +G YPDS+VGTDSHTTMIDGLG+ GWGVGGIEAEA MLGQP+SMVLP
Sbjct: 180 NLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLP 239
Query: 343 GVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIANMS 402
V+G++L GK H VT+TD+VLT+T+ LR+ GVVGKFVEF G G+ +LS+ADRATIANM
Sbjct: 240 QVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMC 299
Query: 403 PEYGATMGFFPVDHVTLQYLKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSSYLE 462
PEYGAT FFPVD V++ YL TGR +E + ++ YL+A MF D+N+P Q+ ++ +E
Sbjct: 300 PEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVE 359
Query: 463 LNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQ 522
L+L V PC SGPKRP D+V + +MK D+ SCL K GFKGF V E F +
Sbjct: 360 LDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNT 419
Query: 523 PAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTK 582
L HGSVVIAAITSCTNTSNPSVMLGAGL+AKKA + GL V P++KTSL+PGSGVVT
Sbjct: 420 EFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTY 479
Query: 583 YLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNRNFEG 642
YL +SG+ YL++ GF +VGYGC TCIGNSG L E V IT D+VA VLSGNRNFEG
Sbjct: 480 YLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEG 539
Query: 643 RVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTTEEIAEVV 702
RVHP TRANYLASPPLV+AYA+AGT+ IDF+KEP+G G+ V+ KDIWPT +EI V
Sbjct: 540 RVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVE 599
Query: 703 QSSVLPDMFKSTYEAITKGNPTWNQLSVPA 732
+ V+P MFK Y+ I N +WN L+ P+
Sbjct: 600 RQYVIPGMFKEVYQKIETVNESWNALATPS 629
|
| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 527 | Back information, alignment and structure |
|---|
| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 490 | Back information, alignment and structure |
|---|
| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259 | Back information, alignment and structure |
|---|
| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 226 | Back information, alignment and structure |
|---|
| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} Length = 162 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 902 | |||
| d2b3ya2 | 629 | Iron-responsive element binding protein 1, N-termi | 100.0 | |
| d1acoa2 | 527 | Aconitase A, N-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1l5ja3 | 490 | Aconitase B, C-terminal domain {Escherichia coli [ | 100.0 | |
| d2b3ya1 | 259 | ron-responsive element binding protein 1, C-termin | 100.0 | |
| d1acoa1 | 226 | Aconitase A, C-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1v7la_ | 162 | Isopropylmalate isomerase LeuD {Pyrococcus horikos | 99.84 |
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aconitase iron-sulfur domain superfamily: Aconitase iron-sulfur domain family: Aconitase iron-sulfur domain domain: Iron-responsive element binding protein 1, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=1600.36 Aligned_cols=629 Identities=61% Similarity=1.052 Sum_probs=608.5
Q ss_pred CCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf 89425520343389997400365068999989888981563301111001487544099999998100589984179630
Q 002599 102 EHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFK 181 (902)
Q Consensus 102 ~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~lP~sirillE~~~R~~~~~~~~~~~vekil~~~~~~~~~~eI~~~ 181 (902)
.|||....++|+..+. .++||+|++|.+.++++|||||||||||+|||||+..+++++|++|++|......+.||+|+
T Consensus 1 ~~~f~~~~~~~~~~~~--~~~~~~l~~l~~~~~~~lP~s~rillEn~lr~~~~~~v~~~~i~~~~~~~~~~~~~~ei~f~ 78 (629)
T d2b3ya2 1 SNPFAHLAEPLDPVQP--GKKFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDIENILHWNVTQHKNIEVPFK 78 (629)
T ss_dssp CCTTGGGEEESCTTST--TCEEECGGGGCCTTGGGSCHHHHHHHHHHHHTCCSSSSCHHHHHHHHTHHHHTTTTCEEEEC
T ss_pred CCCHHHHHHHCCCCCC--CCEEECHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEECCC
T ss_conf 9845777631045788--75373378955157665884299999898870688757999999997233568988744603
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 24345305862779998999999999909998743788887999469988797662679997259999995431214420
Q 002599 182 PARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMELEFQRNKERFAFLKW 261 (902)
Q Consensus 182 pdrVl~qD~TG~paivdlaamrd~~~~~G~dp~~inP~~pv~lviDHsv~~d~~~~~~A~~~n~~~ef~RN~Ery~fLkw 261 (902)
|+||+||||||+|+++|||+|||+++++|+||.+|||.+||+|||||+||+++++++++++.|+++||+||.|||+||||
T Consensus 79 p~rv~lqD~tg~~a~~dlaamrda~~~~g~dp~~i~p~~p~~lviDHsv~~~~~~~~~~~~~n~~~e~~rn~er~~fl~w 158 (629)
T d2b3ya2 79 PARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKW 158 (629)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHHHHHHHTTCCGGGSSCSSCEEEECCSSCCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 24034232557539999998799999707990103789863299778767615888026663301344302788888999
Q ss_pred CCCCCCCCEEECCCCCCCCEEECCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEECCCCHHHHHHHHCCCCEEEEC
Q ss_conf 12235651141899961000101101105531799535781772388876557443110356879999999179078555
Q 002599 262 GSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVL 341 (902)
Q Consensus 262 ~~~~f~ni~vvppG~GI~HQVnlE~la~vv~~~~G~~~PdtiVGTDSHTtm~GglGvlg~GVGg~Eaeaamlg~p~~l~v 341 (902)
++++|+||+|||||+|||||||+||||+||+.++|+++|||||||||||||+||||+|||||||+|+|++|+|||+||++
T Consensus 159 ~~~~~~~~~~~pPg~GI~HQvnlE~la~~v~~~~~~~~pdtlVGtDSHT~~~GalG~lg~GVGg~Eae~amlg~~~~~~v 238 (629)
T d2b3ya2 159 GSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVL 238 (629)
T ss_dssp HHHHSTTEEEECTTSCCHHHHHHHTTCCSEEEETTEEEECEEEESSGGGGGGGGGTCEEEECCHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHCCCEEEEC
T ss_conf 99886346221355425667788875046537788587314996478865000320054686669999998379079953
Q ss_pred CCEEEEEEECCCCCCCCHHCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHH
Q ss_conf 81899999620799999330899999999965842079999559666799222233511463238604112077789999
Q 002599 342 PGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQY 421 (902)
Q Consensus 342 PevVgV~LtG~L~~gVtakDivL~i~~~Lr~~Gvvgk~VEF~G~Gv~~LSv~dRaTIaNMa~E~GAt~g~Fp~De~Tl~Y 421 (902)
||||||+|+|+|++|||||||||+|+++||++|++||||||+|||+++||++||||||||+|||||||||||+|++|++|
T Consensus 239 Pevvgv~L~G~L~~gVtakDliL~i~~~L~~~G~vgk~VEF~G~gi~~LS~~dRaTI~NMa~E~GAt~gifp~De~T~~Y 318 (629)
T d2b3ya2 239 PQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITY 318 (629)
T ss_dssp CCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHCCTTCEEEEESGGGTTSCHHHHHHHHHTHHHHTCSEEECCCCHHHHHH
T ss_pred CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHH
T ss_conf 73689999940599966507898887885407755189874066111068878656642002137569997504614664
Q ss_pred HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
Q ss_conf 97609991579999999998000123899999985227999985874100138999997422565520036431054467
Q 002599 422 LKLTGRSDETVAMVEGYLRANKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 501 (902)
Q Consensus 422 L~~tgR~~~~i~lve~y~ka~~l~~~~~~~D~~a~Y~~vieiDLS~ieP~VAgP~~P~~~v~lse~~~~~~~~l~~~~~~ 501 (902)
|+.|||++++++++++|+++|++|++...+|++|.|+++++||||+|||+||||++|||++++++++.+|.+++..+.++
T Consensus 319 L~~tgR~~~~~~~ve~y~~a~~l~~~~~~~d~da~Y~~vieiDLs~veP~VAgP~~P~d~v~l~e~~~~~~~~l~~~~~~ 398 (629)
T d2b3ya2 319 LVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGF 398 (629)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHTCCCCTTCGGGCCCCSEEEEEEGGGCCSEEECSSCTTCEEEGGGHHHHHHHHHHSCSBT
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHH
T ss_conf 44201341111145677778776411022466667642999866680242578997666158876676866643355432
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHH
Q ss_conf 78788821112201330289754346876899972158899985799999999999986698348862189943859999
Q 002599 502 KGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVT 581 (902)
Q Consensus 502 ~g~~i~~~~~~~~~~~~~~g~~~~l~~g~V~ia~IgSCTNts~~dlm~AA~lLak~A~~~GlkV~p~VktsvaPgS~~V~ 581 (902)
+++....+.......+.+++..+.+.||+|+||||||||||||||+|+||+||||||+++|++++||||++|+|||++|+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~V~ia~IgSCTN~s~~dl~~AA~lLa~kaV~~Gl~v~p~Vk~~v~PGS~~V~ 478 (629)
T d2b3ya2 399 KGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVT 478 (629)
T ss_dssp TBCCCCGGGTTCEEEEEETTEEEEEETTBEEEEEECCHHHHTCHHHHHHHHHHHHHHHHTTCCCCTTSEEEECCSSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHH
T ss_conf 01211333333333332036322345774779999667788817899999998402553398405536688853603323
Q ss_pred HHHHHCCCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCHHHHHH
Q ss_conf 99998592799984694993357533437999997100012467971687862157777898789888527349899999
Q 002599 582 KYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASTITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVA 661 (902)
Q Consensus 582 ~~l~~~Gll~~L~~aGf~i~~~GCg~CiGnsg~l~~~~~~~i~~~~l~~~~V~SgNRNF~GRigp~~~~~YLASP~lVaA 661 (902)
+||+++||+++|+++||+|++|||++||||+|+++++++++|.++|+++++|+|+||||+|||||..++||||||+||||
T Consensus 479 ~~le~~Gl~~~L~~aGf~i~~~GC~~CiGnsGpl~~~~~~~i~~gdl~~~~V~S~NRNFeGR~g~~~~~~yLaSP~lVaA 558 (629)
T d2b3ya2 479 YYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIA 558 (629)
T ss_dssp HHHHHTSCHHHHHHTTCCBCCSSCGGGGTCCCCCCHHHHHHHHHHTCCCEEEESSSCCCTTSSCTTCSEEEECCHHHHHH
T ss_pred HHHHHCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHH
T ss_conf 78776771553331005892464300378878877404331046871576651628898867899989869899999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97607454588889865589997232347999916689874215784210112232358996655556788
Q 002599 662 YALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPTTEEIAEVVQSSVLPDMFKSTYEAITKGNPTWNQLSVPA 732 (902)
Q Consensus 662 ~ALaG~I~~d~~~eplg~~~~G~~v~l~diwP~~~ei~~~~~~~v~~~~f~~~y~~i~~~~~~w~~l~~~~ 732 (902)
|||+|+|+||+++||||+|++|++|||+||||+.+||++++.++++|+||++.|+++++|++.|++|++|+
T Consensus 559 ~AiaG~I~id~~~eplg~~~~G~~V~L~diwPs~~Ei~~~~~~~v~~~~f~~~y~~v~~g~~~W~~l~~p~ 629 (629)
T d2b3ya2 559 YAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPS 629 (629)
T ss_dssp HHHHCBSCCCTTTSCSEEETTTEEECHHHHCCCHHHHHHHHHHHCCHHHHHHHHTTTTTCCHHHHHCCCCC
T ss_pred HHHCEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCCCCC
T ss_conf 98215455687768776699989773678797879999999854696666899887625781011588999
|
| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|