Citrus Sinensis ID: 002610

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900
MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINVRQ
cccccccHHHHHccccccccEEEEEEEcccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHcccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHcccccccccccccccEEcccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHccccEEEccccccHHHHcccccccEEEEcccEEEccccccccccccccccccccccccHHHHHHHHHcccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEEccccccccccHHHHHHccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHHccccccccccccHHcccccEEEEEcccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHcccccHHHHHccccccccccccccccccccHHHHHHHHHccEEEEEEccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccEEEcccccccHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccHHHHHHHHcccccccccccccccccHHHHHHcccccccccccccccccccccEEcccccEEcHHHHHHHHHHccccEEEEEcccccccccHHHHHccccccccEEEEEcccHHHHcccccccccccEEcccccccccccccccEEEEEEccccccccccccEEEEEcccccEEEEEEEEccHHHHHHHHccccHHHHHHHHHHHcc
ccccccHHHHHHHccccccccEEEEEEcHHHcccccccccHHHHHHHHHHHHHccccEEcHHHHHHHHHHHccccccEEEcccccEEEEEccccccHHHHHHHHHHHHHHHcccHHHcccccccEEEEEcEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEccccccEEEEEcHHHHHHHHEccccccccccEEEccccHHHHHHHccEEEEccHHHHHHHHHcccEEEEccEEEEEEEEccccccccHHHHHHHHHHHHcccccEcEEEEEEcHHHHHccHHHHHHHHHHHHHHcEcEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccEEEEccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHcccEEEEEcccEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHcccHHHHHHccccEEEccccEEccccccccHHHHHHHHcccEEEEEEEcccccccccccHcHHHHHcccccHHHHHHHcccEEEcccccccccccccccEEEEcccccHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHccEccccccEcccccccEEccccccccccccccccccHcccEEEEEccccccccccccccccccccHHHHHHHHccccccccccccccccccEEEEEccHHEEEEEHcccccccccEEEEccccccccHHHHHHHHHHccccEEEEccccEcEcccccHHHHHHHHccEEEEEEccEcHHHHHHHHHcccEEEEEccHHHHHHcccccEEEEEEEccccccccccccEEEEEEccccEEEEEEEEccHHHHHHHccccHHHHHHHHHHHccc
MATENPFKSILKtlqrpdggefgkyyslpalndpridklPYSIKILLESAIRNCDEFQVKSKDVEKIIDwettspkqveipfkpaRVLLqdftgvpavvDLACMRDAmnklggdsnkinplvpvdLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFhnmlvvppgsgivhqVNLEYLGRVVfntngmlypdsvvgtdshttmidglgvagwgvgGIEAEAAmlgqpmsmvlpgvvgfklsgklrdgvtaTDLVLTVTQMLRKHGVVGMFVEFYGegmselslADRAtianmspeygatmgffpvDHVTLQYLkltgrsddTVSMIESYLRANKMfvdysepqserVYSSYLELnleevvpcvsgpkrphdrvplnemkadWHACldnrvgfkgfaipKEYQSKVAefnfhgtpaqlrhGDVVIAAITsctntsnpsVMLGAALVAKKACELGlevkpwiktslapgsgvVTKYLQNSGLQKYLNHLGFHIVGYGcttcignsgdIDDAVAAAITENDIVAAAVLSgnrnfegrvhpltranylaspPLVVAYALAgsvnidfetepvgvgkdgkkiflrdiwpsseEVAHVVQKSVLPDMFKATYEAItkgnpmwnqlsvpsgtlyawdpkstyiheppyfkdmtmsppgphgvkgaycllnfgdsittdhispagsihkdspaAKYLMErgvdrrdfnsygsrrgndeimARGTFANIRLVNKllngevgpktihiptgeklSVFDAAMRYKNEGHDTVILAGaeygsgssrdwaakgpmLLGVKAVIAKSFERIHRsnlvgmgiiplcfkpgedaethgltgherytidlpssvseirpgqdvrvvtdsgksftcvIRFDTEVELAYFDHGGILQYVIRNLINVRQ
matenpfksilktlqrpdggeFGKYyslpalndpriDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWettspkqveipfKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWiktslapgsGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIdfetepvgvgkdgKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAItkgnpmwnqLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHIspagsihkdspaaKYLMergvdrrdfnsygsrrgndeiMARGTFANIRLVNKLLNGevgpktihiptgeklSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTidlpssvseirpgqdvrvvtdsgksfTCVIRFDTEVELAYFDHGGILQYVIRNLINVRQ
MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDglgvagwgvggieaeaaMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINVRQ
*******************GEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSG******RVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCI************AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMT******HGVKGAYCLLNFGDSITTDHI***********************************DEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLP*****IRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINV**
**********LKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN****D*NKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVG*****************NFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLIN***
MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINVRQ
****NPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINV**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINVRQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query900 2.2.26 [Sep-21-2011]
Q42560898 Aconitate hydratase 1 OS= yes no 0.995 0.997 0.904 0.0
P49608898 Aconitate hydratase, cyto N/A no 0.995 0.997 0.875 0.0
Q6YZX6898 Putative aconitate hydrat yes no 0.994 0.996 0.864 0.0
Q9SIB9990 Aconitate hydratase 2, mi no no 0.994 0.904 0.868 0.0
Q94A28995 Aconitate hydratase 3, mi no no 0.994 0.899 0.8 0.0
Q42669764 Aconitate hydratase (Frag N/A no 0.843 0.993 0.865 0.0
Q54X73894 Probable cytoplasmic acon yes no 0.991 0.997 0.634 0.0
P21399889 Cytoplasmic aconitate hyd yes no 0.983 0.995 0.604 0.0
Q90875889 Cytoplasmic aconitate hyd yes no 0.982 0.994 0.619 0.0
P28271889 Cytoplasmic aconitate hyd yes no 0.984 0.996 0.608 0.0
>sp|Q42560|ACO1_ARATH Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2 Back     alignment and function desciption
 Score = 1704 bits (4413), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 810/896 (90%), Positives = 855/896 (95%)

Query: 1   MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVK 60
           MA+ENPF+SILK L++PDGGEFG YYSLPALNDPRIDKLPYSI+ILLESAIRNCDEFQVK
Sbjct: 1   MASENPFRSILKALEKPDGGEFGNYYSLPALNDPRIDKLPYSIRILLESAIRNCDEFQVK 60

Query: 61  SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120
           SKDVEKI+DWE TSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LGGDSNKINP
Sbjct: 61  SKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDSNKINP 120

Query: 121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
           LVPVDLVIDHSVQVDVARSENAVQANME EF+RNKERFAFLKWGSNAFHNMLVVPPGSGI
Sbjct: 121 LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGI 180

Query: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240
           VHQVNLEYL RVVFNTNG+LYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEA MLGQPMS
Sbjct: 181 VHQVNLEYLARVVFNTNGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMS 240

Query: 241 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300
           MVLPGVVGFKL+GKLRDG+TATDLVLTVTQMLRKHGVVG FVEF+GEGM ELSLADRATI
Sbjct: 241 MVLPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEFHGEGMRELSLADRATI 300

Query: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360
           ANMSPEYGATMGFFPVDHVTLQYL+LTGRSDDTVSMIE+YLRANKMFVDYSEP+S+ VYS
Sbjct: 301 ANMSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRANKMFVDYSEPESKTVYS 360

Query: 361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420
           S LELNLE+V PCVSGPKRPHDRVPL EMKADWH+CLDNRVGFKGFA+PKE QSK  EFN
Sbjct: 361 SCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGFKGFAVPKEAQSKAVEFN 420

Query: 421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480
           F+GT AQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKAC+LGLEVKPWIKTSLAPGSG
Sbjct: 421 FNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACDLGLEVKPWIKTSLAPGSG 480

Query: 481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540
           VVTKYL  SGLQKYLN LGF IVGYGCTTCIGNSGDI +AVA+AI +ND+VA+AVLSGNR
Sbjct: 481 VVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVASAIVDNDLVASAVLSGNR 540

Query: 541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600
           NFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFET+P+G GKDGK+IF RDIWPS++EV
Sbjct: 541 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETQPIGTGKDGKQIFFRDIWPSNKEV 600

Query: 601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660
           A VVQ SVLPDMFKATYEAITKGN MWNQLSV SGTLY WDPKSTYIHEPPYFK MTMSP
Sbjct: 601 AEVVQSSVLPDMFKATYEAITKGNSMWNQLSVASGTLYEWDPKSTYIHEPPYFKGMTMSP 660

Query: 661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
           PGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND
Sbjct: 661 PGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720

Query: 721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780
           EIMARGTFANIR+VNK L GEVGPKT+HIPTGEKLSVFDAAM+Y+NEG DT+ILAGAEYG
Sbjct: 721 EIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKLSVFDAAMKYRNEGRDTIILAGAEYG 780

Query: 781 SGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERY 840
           SGSSRDWAAKGPMLLGVKAVI+KSFERIHRSNLVGMGIIPLCFK GEDAET GLTG E Y
Sbjct: 781 SGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELY 840

Query: 841 TIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLI 896
           TI+LP++VSEI+PGQDV VVT++GKSFTC +RFDTEVELAYFDHGGILQYVIRNLI
Sbjct: 841 TIELPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 896
Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 3
>sp|P49608|ACOC_CUCMA Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1 Back     alignment and function description
>sp|Q6YZX6|ACOC_ORYSJ Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1 Back     alignment and function description
>sp|Q9SIB9|ACO2M_ARATH Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2 Back     alignment and function description
>sp|Q94A28|ACO3M_ARATH Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=3 Back     alignment and function description
>sp|Q42669|ACOC_CUCMC Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1 Back     alignment and function description
>sp|Q54X73|ACOC_DICDI Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1 Back     alignment and function description
>sp|P21399|ACOC_HUMAN Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3 Back     alignment and function description
>sp|Q90875|ACOC_CHICK Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1 Back     alignment and function description
>sp|P28271|ACOC_MOUSE Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query900
285309965900 aconitate hydratase 1 [Citrus clementina 1.0 1.0 0.997 0.0
255579588900 aconitase, putative [Ricinus communis] g 1.0 1.0 0.924 0.0
224117236899 predicted protein [Populus trichocarpa] 0.998 1.0 0.917 0.0
225468576900 PREDICTED: aconitate hydratase 1-like [V 0.998 0.998 0.912 0.0
224133986899 predicted protein [Populus trichocarpa] 0.998 1.0 0.921 0.0
296084058918 unnamed protein product [Vitis vinifera] 0.997 0.978 0.912 0.0
15233349898 aconitate hydratase 1 [Arabidopsis thali 0.995 0.997 0.904 0.0
449434116900 PREDICTED: aconitate hydratase 1-like [C 1.0 1.0 0.894 0.0
356538327901 PREDICTED: aconitate hydratase 1-like [G 1.0 0.998 0.895 0.0
356496602901 PREDICTED: aconitate hydratase 1 [Glycin 1.0 0.998 0.894 0.0
>gi|285309965|emb|CBE71056.1| aconitate hydratase 1 [Citrus clementina] Back     alignment and taxonomy information
 Score = 1862 bits (4822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 898/900 (99%), Positives = 899/900 (99%)

Query: 1   MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVK 60
           MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRI KLPYSIKILLESAIRNCDEFQVK
Sbjct: 1   MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIGKLPYSIKILLESAIRNCDEFQVK 60

Query: 61  SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120
           SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP
Sbjct: 61  SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120

Query: 121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
           LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI
Sbjct: 121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180

Query: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240
           VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS
Sbjct: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240

Query: 241 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300
           MVLPGVVGFKLSGKL+DGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI
Sbjct: 241 MVLPGVVGFKLSGKLQDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300

Query: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360
           ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS
Sbjct: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360

Query: 361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420
           SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN
Sbjct: 361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420

Query: 421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480
           FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG
Sbjct: 421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480

Query: 481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540
           VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR
Sbjct: 481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540

Query: 541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600
           NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV
Sbjct: 541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600

Query: 601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660
           AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP
Sbjct: 601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660

Query: 661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
           PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND
Sbjct: 661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720

Query: 721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780
           EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG
Sbjct: 721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780

Query: 781 SGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERY 840
           SGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERY
Sbjct: 781 SGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERY 840

Query: 841 TIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINVRQ 900
           TIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINVRQ
Sbjct: 841 TIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLINVRQ 900

Source: Citrus clementina

Species: Citrus clementina

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255579588|ref|XP_002530635.1| aconitase, putative [Ricinus communis] gi|223529808|gb|EEF31743.1| aconitase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224117236|ref|XP_002331755.1| predicted protein [Populus trichocarpa] gi|222874452|gb|EEF11583.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225468576|ref|XP_002263337.1| PREDICTED: aconitate hydratase 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224133986|ref|XP_002327728.1| predicted protein [Populus trichocarpa] gi|222836813|gb|EEE75206.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296084058|emb|CBI24446.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15233349|ref|NP_195308.1| aconitate hydratase 1 [Arabidopsis thaliana] gi|13124706|sp|Q42560.2|ACO1_ARATH RecName: Full=Aconitate hydratase 1; Short=Aconitase 1; AltName: Full=Citrate hydro-lyase 1 gi|3805849|emb|CAA21469.1| cytoplasmatic aconitate hydratase (citrate hydro-lyase)(aconitase)(EC 4.2.1.3) [Arabidopsis thaliana] gi|7270535|emb|CAB81492.1| cytoplasmatic aconitate hydratase (citrate hydro-lyase)(aconitase)(EC 4.2.1.3) [Arabidopsis thaliana] gi|17065392|gb|AAL32850.1| Unknown protein [Arabidopsis thaliana] gi|332661176|gb|AEE86576.1| aconitate hydratase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449434116|ref|XP_004134842.1| PREDICTED: aconitate hydratase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356538327|ref|XP_003537655.1| PREDICTED: aconitate hydratase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356496602|ref|XP_003517155.1| PREDICTED: aconitate hydratase 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query900
TAIR|locus:2125354898 ACO1 "AT4G35830" [Arabidopsis 0.995 0.997 0.886 0.0
TAIR|locus:2063354990 ACO3 "AT2G05710" [Arabidopsis 0.994 0.904 0.850 0.0
TAIR|locus:2116297995 ACO2 "AT4G26970" [Arabidopsis 0.994 0.899 0.781 0.0
DICTYBASE|DDB_G0279159894 aco1 "aconitate hydratase" [Di 0.991 0.997 0.617 1.4e-300
UNIPROTKB|F1NY25889 ACO1 "Cytoplasmic aconitate hy 0.983 0.995 0.601 1.7e-295
UNIPROTKB|Q90875889 ACO1 "Cytoplasmic aconitate hy 0.983 0.995 0.601 2.2e-295
UNIPROTKB|I3LJW4898 ACO1 "Uncharacterized protein" 0.983 0.985 0.597 1.8e-293
UNIPROTKB|E2RMX9901 ACO1 "Uncharacterized protein" 0.983 0.982 0.593 1.3e-292
MGI|MGI:87879889 Aco1 "aconitase 1" [Mus muscul 0.984 0.996 0.591 2e-292
UNIPROTKB|Q0VCU1889 ACO1 "Cytoplasmic aconitate hy 0.983 0.995 0.590 5.4e-292
TAIR|locus:2125354 ACO1 "AT4G35830" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4192 (1480.7 bits), Expect = 0., P = 0.
 Identities = 794/896 (88%), Positives = 839/896 (93%)

Query:     1 MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVK 60
             MA+ENPF+SILK L++PDGGEFG YYSLPALNDPRIDKLPYSI+ILLESAIRNCDEFQVK
Sbjct:     1 MASENPFRSILKALEKPDGGEFGNYYSLPALNDPRIDKLPYSIRILLESAIRNCDEFQVK 60

Query:    61 SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120
             SKDVEKI+DWE TSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LGGDSNKINP
Sbjct:    61 SKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDSNKINP 120

Query:   121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
             LVPVDLVIDHSVQVDVARSENAVQANME EF+RNKERFAFLKWGSNAFHNMLVVPPGSGI
Sbjct:   121 LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGI 180

Query:   181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMS 240
             VHQVNLEYL RVVFNTNG+LYPDSVVGTDSHTTMID                 MLGQPMS
Sbjct:   181 VHQVNLEYLARVVFNTNGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMS 240

Query:   241 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300
             MVLPGVVGFKL+GKLRDG+TATDLVLTVTQMLRKHGVVG FVEF+GEGM ELSLADRATI
Sbjct:   241 MVLPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEFHGEGMRELSLADRATI 300

Query:   301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360
             ANMSPEYGATMGFFPVDHVTLQYL+LTGRSDDTVSMIE+YLRANKMFVDYSEP+S+ VYS
Sbjct:   301 ANMSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRANKMFVDYSEPESKTVYS 360

Query:   361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420
             S LELNLE+V PCVSGPKRPHDRVPL EMKADWH+CLDNRVGFKGFA+PKE QSK  EFN
Sbjct:   361 SCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGFKGFAVPKEAQSKAVEFN 420

Query:   421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480
             F+GT AQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKAC+LGLEVKPWIKTSLAPGSG
Sbjct:   421 FNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACDLGLEVKPWIKTSLAPGSG 480

Query:   481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540
             VVTKYL  SGLQKYLN LGF IVGYGCTTCIGNSGDI +AVA+AI +ND+VA+AVLSGNR
Sbjct:   481 VVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVASAIVDNDLVASAVLSGNR 540

Query:   541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600
             NFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFET+P+G GKDGK+IF RDIWPS++EV
Sbjct:   541 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETQPIGTGKDGKQIFFRDIWPSNKEV 600

Query:   601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660
             A VVQ SVLPDMFKATYEAITKGN MWNQLSV SGTLY WDPKSTYIHEPPYFK MTMSP
Sbjct:   601 AEVVQSSVLPDMFKATYEAITKGNSMWNQLSVASGTLYEWDPKSTYIHEPPYFKGMTMSP 660

Query:   661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
             PGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND
Sbjct:   661 PGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720

Query:   721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780
             EIMARGTFANIR+VNK L GEVGPKT+HIPTGEKLSVFDAAM+Y+NEG DT+ILAGAEYG
Sbjct:   721 EIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKLSVFDAAMKYRNEGRDTIILAGAEYG 780

Query:   781 SGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERY 840
             SGSSRDWAAKGPMLLGVKAVI+KSFERIHRSNLVGMGIIPLCFK GEDAET GLTG E Y
Sbjct:   781 SGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELY 840

Query:   841 TIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLI 896
             TI+LP++VSEI+PGQDV VVT++GKSFTC +RFDTEVELAYFDHGGILQYVIRNLI
Sbjct:   841 TIELPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 896
GO:0003994 "aconitate hydratase activity" evidence=ISS;IMP
GO:0005737 "cytoplasm" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA
GO:0005739 "mitochondrion" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005829 "cytosol" evidence=IDA;NAS
GO:0006101 "citrate metabolic process" evidence=IMP
GO:0006102 "isocitrate metabolic process" evidence=IMP
GO:0048027 "mRNA 5'-UTR binding" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP;RCA
GO:0048046 "apoplast" evidence=IDA
GO:0005507 "copper ion binding" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0000302 "response to reactive oxygen species" evidence=RCA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0006972 "hyperosmotic response" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0007033 "vacuole organization" evidence=RCA
GO:0009266 "response to temperature stimulus" evidence=RCA
GO:0010039 "response to iron ion" evidence=RCA
GO:0015979 "photosynthesis" evidence=RCA
GO:0046686 "response to cadmium ion" evidence=RCA
GO:0055072 "iron ion homeostasis" evidence=RCA
TAIR|locus:2063354 ACO3 "AT2G05710" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116297 ACO2 "AT4G26970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279159 aco1 "aconitate hydratase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1NY25 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q90875 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|I3LJW4 ACO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RMX9 ACO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:87879 Aco1 "aconitase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VCU1 ACO1 "Cytoplasmic aconitate hydratase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6YZX6ACOC_ORYSJ4, ., 2, ., 1, ., 30.86480.99440.9966yesno
Q6G9K9ACON_STAAS4, ., 2, ., 1, ., 30.53880.96550.9644yesno
P63433ACON_STAAM4, ., 2, ., 1, ., 30.53880.96550.9644yesno
P09339ACON_BACSU4, ., 2, ., 1, ., 30.55840.960.9504yesno
Q90875ACOC_CHICK4, ., 2, ., 1, ., 30.61990.98220.9943yesno
Q94A28ACO3M_ARATH4, ., 2, ., 1, ., 30.80.99440.8994nono
Q0VCU1ACOC_BOVIN4, ., 2, ., 1, ., 30.60710.98330.9955yesno
Q68VV0ACON_RICTY4, ., 2, ., 1, ., 30.54050.930.9533yesno
Q92G90ACON_RICCN4, ., 2, ., 1, ., 30.54670.93330.9567yesno
Q9SIB9ACO2M_ARATH4, ., 2, ., 1, ., 30.86810.99440.9040nono
Q9RTN7ACON_DEIRA4, ., 2, ., 1, ., 30.55240.97770.9713yesno
P99148ACON_STAAN4, ., 2, ., 1, ., 30.53880.96550.9644yesno
Q54X73ACOC_DICDI4, ., 2, ., 1, ., 30.63400.99110.9977yesno
O04916ACOC_SOLTU4, ., 2, ., 1, ., 30.84660.68110.9951N/Ano
Q8NQ98ACON_CORGL4, ., 2, ., 1, ., 30.50270.96220.9222yesno
P28271ACOC_MOUSE4, ., 2, ., 1, ., 30.60870.98440.9966yesno
P49608ACOC_CUCMA4, ., 2, ., 1, ., 30.8750.99550.9977N/Ano
Q6GH55ACON_STAAR4, ., 2, ., 1, ., 30.53880.96550.9644yesno
Q2A1K3ACON_FRATH4, ., 2, ., 1, ., 30.53210.97770.9391yesno
Q42669ACOC_CUCMC4, ., 2, ., 1, ., 30.86570.84330.9934N/Ano
Q5HPJ0ACON_STAEQ4, ., 2, ., 1, ., 30.54340.96550.9644yesno
Q01059ACOC_RABIT4, ., 2, ., 1, ., 30.60710.98330.9955yesno
Q4UK20ACON_RICFE4, ., 2, ., 1, ., 30.54740.930.9533yesno
P63434ACON_STAAW4, ., 2, ., 1, ., 30.53880.96550.9644yesno
Q9ZCF4ACON_RICPR4, ., 2, ., 1, ., 30.53630.92660.9498yesno
Q42560ACO1_ARATH4, ., 2, ., 1, ., 30.90400.99550.9977yesno
P21399ACOC_HUMAN4, ., 2, ., 1, ., 30.60490.98330.9955yesno
Q8CPC2ACON_STAES4, ., 2, ., 1, ., 30.54340.96550.9644yesno
Q8FTA8ACON_COREF4, ., 2, ., 1, ., 30.50540.96110.9231yesno
Q63270ACOC_RAT4, ., 2, ., 1, ., 30.60530.98440.9966yesno
Q9I3F5ACON1_PSEAE4, ., 2, ., 1, ., 30.55220.980.9692yesno
A0QX20ACON_MYCS24, ., 2, ., 1, ., 30.50730.98770.9427yesno
Q1RKD5ACON_RICBR4, ., 2, ., 1, ., 30.54080.940.9559yesno
P70920ACON_BRAJA4, ., 2, ., 1, ., 30.53740.95440.9481yesno
Q59938ACON_STRMU4, ., 2, ., 1, ., 30.52590.95220.9650yesno
Q23500ACOC_CAEEL4, ., 2, ., 1, ., 30.60310.98220.9966yesno
P25516ACON1_ECOLI4, ., 2, ., 1, ., 30.54910.95330.9629N/Ano
Q6NH63ACON_CORDI4, ., 2, ., 1, ., 30.51190.960.9250yesno
P37032ACON_LEGPH4, ., 2, ., 1, ., 30.56300.95550.9652yesno
Q4JVM4ACON_CORJK4, ., 2, ., 1, ., 30.50650.96110.9241yesno
Q5HG69ACON_STAAC4, ., 2, ., 1, ., 30.53880.96550.9644yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.10.998
3rd Layer4.2.1.30.993

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.01810009
aconitate hydratase 1 (EC-4.2.1.3) (899 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_Genewise1_v1.C_LG_XVI2794
citrate synthase (EC-2.3.3.1) (509 aa)
•    •• 0.941
estExt_Genewise1_v1.C_LG_XIV2957
citrate synthase (EC-2.3.3.1) (512 aa)
•    •• 0.941
estExt_fgenesh4_pm.C_1480010
citrate synthase (EC-2.3.3.1) (478 aa)
   • •• 0.916
estExt_fgenesh4_pg.C_LG_XVI0781
SubName- Full=Putative uncharacterized protein; (363 aa)
•    •• 0.908
eugene3.00280188
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (361 aa)
•    •• 0.908
estExt_fgenesh4_pg.C_660173
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (371 aa)
•    •• 0.902
estExt_fgenesh4_pm.C_LG_IX0030
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (372 aa)
•    •• 0.902
eugene3.00050378
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (339 aa)
•    •• 0.902
estExt_fgenesh4_pg.C_LG_VII0812
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (367 aa)
•    •• 0.902
eugene3.00070229
isocitrate lyase (EC-4.1.3.1) (576 aa)
     •  0.900

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query900
PLN00070936 PLN00070, PLN00070, aconitate hydratase 0.0
PTZ00092898 PTZ00092, PTZ00092, aconitate hydratase-like prote 0.0
PRK09277888 PRK09277, PRK09277, aconitate hydratase; Validated 0.0
TIGR01341876 TIGR01341, aconitase_1, aconitate hydratase 1 0.0
PRK12881889 PRK12881, acnA, aconitate hydratase; Provisional 0.0
COG1048861 COG1048, AcnA, Aconitase A [Energy production and 0.0
cd01586404 cd01586, AcnA_IRP, Aconitase A catalytic domain 0.0
TIGR02333858 TIGR02333, 2met_isocit_dHY, 2-methylisocitrate deh 0.0
pfam00330464 pfam00330, Aconitase, Aconitase family (aconitate 1e-160
cd01580171 cd01580, AcnA_IRP_Swivel, Aconitase A swivel domai 1e-110
cd01351389 cd01351, Aconitase, Aconitase catalytic domain; Ac 2e-91
TIGR01340745 TIGR01340, aconitase_mito, aconitate hydratase, mi 2e-70
TIGR01342658 TIGR01342, acon_putative, aconitate hydratase, put 4e-66
PRK07229646 PRK07229, PRK07229, aconitate hydratase; Validated 1e-57
pfam00694131 pfam00694, Aconitase_C, Aconitase C-terminal domai 3e-57
cd01584412 cd01584, AcnA_Mitochondrial, Aconitase catalyzes t 8e-56
cd01585380 cd01585, AcnA_Bact, Aconitase catalyzes the revers 1e-50
cd01583382 cd01583, IPMI, 3-isopropylmalate dehydratase catal 3e-46
COG0065423 COG0065, LeuC, 3-isopropylmalate dehydratase large 1e-40
PRK00402418 PRK00402, PRK00402, 3-isopropylmalate dehydratase 1e-31
TIGR02083419 TIGR02083, LEU2, 3-isopropylmalate dehydratase, la 9e-31
TIGR02086412 TIGR02086, IPMI_arch, 3-isopropylmalate dehydratas 1e-30
TIGR00170465 TIGR00170, leuC, 3-isopropylmalate dehydratase, la 4e-29
PRK12466471 PRK12466, PRK12466, isopropylmalate isomerase larg 1e-28
TIGR01343412 TIGR01343, hacA_fam, homoaconitate hydratase famil 3e-27
cd01582363 cd01582, Homoaconitase, Homoaconitase and other un 1e-26
TIGR00139712 TIGR00139, h_aconitase, homoaconitase 5e-25
PRK07229646 PRK07229, PRK07229, aconitate hydratase; Validated 8e-24
cd01579121 cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-lik 4e-21
cd0040488 cd00404, Aconitase_swivel, Aconitase swivel domain 1e-19
cd01578149 cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconi 4e-16
PRK05478466 PRK05478, PRK05478, isopropylmalate isomerase larg 8e-16
cd0157791 cd01577, IPMI_Swivel, Aconatase-like swivel domain 6e-12
COG0066191 COG0066, LeuD, 3-isopropylmalate dehydratase small 6e-10
PRK11413751 PRK11413, PRK11413, putative hydratase; Provisiona 1e-09
TIGR02087154 TIGR02087, LEUD_arch, 3-isopropylmalate dehydratas 3e-09
PRK14023166 PRK14023, PRK14023, homoaconitate hydratase small 8e-09
cd01581436 cd01581, AcnB, Aconitate hydratase B catalyses the 9e-09
TIGR00117844 TIGR00117, acnB, aconitate hydratase 2 1e-07
PRK00439163 PRK00439, leuD, 3-isopropylmalate dehydratase smal 4e-07
COG1049852 COG1049, AcnB, Aconitase B [Energy production and 4e-07
PRK09238835 PRK09238, PRK09238, bifunctional aconitate hydrata 6e-06
PRK01641200 PRK01641, leuD, isopropylmalate isomerase small su 3e-05
PRK05478466 PRK05478, PRK05478, isopropylmalate isomerase larg 6e-05
PLN00094938 PLN00094, PLN00094, aconitate hydratase 2; Provisi 6e-05
TIGR02084156 TIGR02084, leud, 3-isopropylmalate dehydratase, sm 4e-04
PLN00072246 PLN00072, PLN00072, 3-isopropylmalate isomerase/de 0.002
>gnl|CDD|215047 PLN00070, PLN00070, aconitate hydratase Back     alignment and domain information 
 Score = 2013 bits (5216), Expect = 0.0
 Identities = 811/897 (90%), Positives = 857/897 (95%)

Query: 1   MATENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVK 60
           MA+ENPFK IL +L +P GGEFGKYYSLPALNDPRIDKLPYSI+ILLESAIRNCD FQV 
Sbjct: 39  MASENPFKGILTSLPKPGGGEFGKYYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVT 98

Query: 61  SKDVEKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINP 120
            +DVEKIIDWE TSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LGGD NKINP
Sbjct: 99  KEDVEKIIDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDPNKINP 158

Query: 121 LVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGI 180
           LVPVDLVIDHSVQVDVARSENAVQANME EF+RNKERFAFLKWGS AF NMLVVPPGSGI
Sbjct: 159 LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFQNMLVVPPGSGI 218

Query: 181 VHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 240
           VHQVNLEYLGRVVFNT+G+LYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS
Sbjct: 219 VHQVNLEYLGRVVFNTDGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS 278

Query: 241 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATI 300
           MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVG FVEFYGEGMSELSLADRATI
Sbjct: 279 MVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATI 338

Query: 301 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYS 360
           ANMSPEYGATMGFFPVDHVTLQYLKLTGRSD+TV+MIE+YLRANKMFVDY+EPQ ERVYS
Sbjct: 339 ANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRANKMFVDYNEPQQERVYS 398

Query: 361 SYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFN 420
           SYLEL+LE+V PC+SGPKRPHDRVPL EMKADWH+CLDN+VGFKGFA+PKE QSKVA+F+
Sbjct: 399 SYLELDLEDVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKEAQSKVAKFS 458

Query: 421 FHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSG 480
           FHG PA+LRHG VVIAAITSCTNTSNPSVMLGA LVAKKACELGLEVKPWIKTSLAPGSG
Sbjct: 459 FHGQPAELRHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLEVKPWIKTSLAPGSG 518

Query: 481 VVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNR 540
           VVTKYL  SGLQKYLN  GFHIVGYGCTTCIGNSG++D++VA+AITENDIVAAAVLSGNR
Sbjct: 519 VVTKYLLKSGLQKYLNQQGFHIVGYGCTTCIGNSGELDESVASAITENDIVAAAVLSGNR 578

Query: 541 NFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEV 600
           NFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFE EP+G GKDGK +F RDIWPS+EEV
Sbjct: 579 NFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKDVFFRDIWPSNEEV 638

Query: 601 AHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSP 660
           A VVQ SVLPDMFK+TYEAITKGNPMWNQLSVPSGTLY+WDPKSTYIHEPPYFK+MTMSP
Sbjct: 639 AEVVQSSVLPDMFKSTYEAITKGNPMWNQLSVPSGTLYSWDPKSTYIHEPPYFKNMTMSP 698

Query: 661 PGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGND 720
           PGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDR+DFNSYGSRRGND
Sbjct: 699 PGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRKDFNSYGSRRGND 758

Query: 721 EIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYG 780
           EIMARGTFANIR+VNKLL GEVGPKT+HIPTGEKLSVFDAAM+YK+EGHDT+ILAGAEYG
Sbjct: 759 EIMARGTFANIRIVNKLLKGEVGPKTVHIPTGEKLSVFDAAMKYKSEGHDTIILAGAEYG 818

Query: 781 SGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERY 840
           SGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA+T GLTGHERY
Sbjct: 819 SGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERY 878

Query: 841 TIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLIN 897
           TIDLPS++SEI+PGQDV V TD+GKSFTC +RFDTEVELAYFDHGGIL YVIRNLI 
Sbjct: 879 TIDLPSNISEIKPGQDVTVTTDNGKSFTCTLRFDTEVELAYFDHGGILPYVIRNLIK 935

Length = 936
>gnl|CDD|240263 PTZ00092, PTZ00092, aconitate hydratase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|236445 PRK09277, PRK09277, aconitate hydratase; Validated Back     alignment and domain information
>gnl|CDD|233363 TIGR01341, aconitase_1, aconitate hydratase 1 Back     alignment and domain information
>gnl|CDD|237246 PRK12881, acnA, aconitate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|223977 COG1048, AcnA, Aconitase A [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|153136 cd01586, AcnA_IRP, Aconitase A catalytic domain Back     alignment and domain information
>gnl|CDD|131386 TIGR02333, 2met_isocit_dHY, 2-methylisocitrate dehydratase, Fe/S-dependent Back     alignment and domain information
>gnl|CDD|215861 pfam00330, Aconitase, Aconitase family (aconitate hydratase) Back     alignment and domain information
>gnl|CDD|238812 cd01580, AcnA_IRP_Swivel, Aconitase A swivel domain Back     alignment and domain information
>gnl|CDD|153129 cd01351, Aconitase, Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>gnl|CDD|233362 TIGR01340, aconitase_mito, aconitate hydratase, mitochondrial Back     alignment and domain information
>gnl|CDD|130409 TIGR01342, acon_putative, aconitate hydratase, putative, Aquifex type Back     alignment and domain information
>gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated Back     alignment and domain information
>gnl|CDD|201399 pfam00694, Aconitase_C, Aconitase C-terminal domain Back     alignment and domain information
>gnl|CDD|153134 cd01584, AcnA_Mitochondrial, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>gnl|CDD|153135 cd01585, AcnA_Bact, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>gnl|CDD|153133 cd01583, IPMI, 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate Back     alignment and domain information
>gnl|CDD|223143 COG0065, LeuC, 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|234748 PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed Back     alignment and domain information
>gnl|CDD|131138 TIGR02083, LEU2, 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>gnl|CDD|233715 TIGR02086, IPMI_arch, 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>gnl|CDD|232854 TIGR00170, leuC, 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>gnl|CDD|183543 PRK12466, PRK12466, isopropylmalate isomerase large subunit; Provisional Back     alignment and domain information
>gnl|CDD|130410 TIGR01343, hacA_fam, homoaconitate hydratase family protein Back     alignment and domain information
>gnl|CDD|153132 cd01582, Homoaconitase, Homoaconitase and other uncharacterized proteins of the Aconitase family Back     alignment and domain information
>gnl|CDD|129245 TIGR00139, h_aconitase, homoaconitase Back     alignment and domain information
>gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated Back     alignment and domain information
>gnl|CDD|238811 cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-like swivel domain Back     alignment and domain information
>gnl|CDD|238236 cd00404, Aconitase_swivel, Aconitase swivel domain Back     alignment and domain information
>gnl|CDD|238810 cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconitase A swivel domain Back     alignment and domain information
>gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated Back     alignment and domain information
>gnl|CDD|238809 cd01577, IPMI_Swivel, Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins Back     alignment and domain information
>gnl|CDD|223144 COG0066, LeuD, 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|183125 PRK11413, PRK11413, putative hydratase; Provisional Back     alignment and domain information
>gnl|CDD|233716 TIGR02087, LEUD_arch, 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>gnl|CDD|184460 PRK14023, PRK14023, homoaconitate hydratase small subunit; Provisional Back     alignment and domain information
>gnl|CDD|153131 cd01581, AcnB, Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle Back     alignment and domain information
>gnl|CDD|129223 TIGR00117, acnB, aconitate hydratase 2 Back     alignment and domain information
>gnl|CDD|234762 PRK00439, leuD, 3-isopropylmalate dehydratase small subunit; Reviewed Back     alignment and domain information
>gnl|CDD|223978 COG1049, AcnB, Aconitase B [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|236424 PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated Back     alignment and domain information
>gnl|CDD|179314 PRK01641, leuD, isopropylmalate isomerase small subunit; Provisional Back     alignment and domain information
>gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated Back     alignment and domain information
>gnl|CDD|215053 PLN00094, PLN00094, aconitate hydratase 2; Provisional Back     alignment and domain information
>gnl|CDD|131139 TIGR02084, leud, 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>gnl|CDD|177701 PLN00072, PLN00072, 3-isopropylmalate isomerase/dehydratase small subunit; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 900
KOG0452892 consensus RNA-binding translational regulator IRP 100.0
PLN00070936 aconitate hydratase 100.0
PTZ00092898 aconitate hydratase-like protein; Provisional 100.0
TIGR01341876 aconitase_1 aconitate hydratase 1. This model repr 100.0
PRK12881889 acnA aconitate hydratase; Provisional 100.0
PRK09277888 aconitate hydratase; Validated 100.0
TIGR02333858 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe 100.0
COG1048861 AcnA Aconitase A [Energy production and conversion 100.0
TIGR01340745 aconitase_mito aconitate hydratase, mitochondrial. 100.0
PRK07229646 aconitate hydratase; Validated 100.0
TIGR01342658 acon_putative aconitate hydratase, putative, Aquif 100.0
TIGR00139712 h_aconitase homoaconitase. Homoaconitase, aconitas 100.0
PRK11413751 putative hydratase; Provisional 100.0
KOG0453778 consensus Aconitase/homoaconitase (aconitase super 100.0
cd01586404 AcnA_IRP Aconitase A catalytic domain. Aconitase A 100.0
TIGR00170465 leuC 3-isopropylmalate dehydratase, large subunit. 100.0
PRK12466471 isopropylmalate isomerase large subunit; Provision 100.0
PRK05478466 isopropylmalate isomerase large subunit; Validated 100.0
PF00330465 Aconitase: Aconitase family (aconitate hydratase); 100.0
cd01584412 AcnA_Mitochondrial Aconitase catalyzes the reversi 100.0
cd01583382 IPMI 3-isopropylmalate dehydratase catalyzes the i 100.0
TIGR01343412 hacA_fam homoaconitate hydratase family protein. T 100.0
PRK00402418 3-isopropylmalate dehydratase large subunit; Revie 100.0
TIGR02086412 IPMI_arch 3-isopropylmalate dehydratase, large sub 100.0
cd01585380 AcnA_Bact Aconitase catalyzes the reversible isome 100.0
TIGR02083419 LEU2 3-isopropylmalate dehydratase, large subunit. 100.0
COG0065423 LeuC 3-isopropylmalate dehydratase large subunit [ 100.0
cd01581436 AcnB Aconitate hydratase B catalyses the formation 100.0
cd01582363 Homoaconitase Homoaconitase and other uncharacteri 100.0
cd01351389 Aconitase Aconitase catalytic domain; Aconitase ca 100.0
PRK09238835 bifunctional aconitate hydratase 2/2-methylisocitr 100.0
TIGR00117844 acnB aconitate hydratase 2. Aconitate hydratase (a 100.0
PLN00094938 aconitate hydratase 2; Provisional 100.0
cd01580171 AcnA_IRP_Swivel Aconitase A swivel domain. This is 100.0
COG1049852 AcnB Aconitase B [Energy production and conversion 100.0
KOG0454502 consensus 3-isopropylmalate dehydratase (aconitase 100.0
cd01578149 AcnA_Mitochon_Swivel Mitochondrial aconitase A swi 100.0
PRK00439163 leuD 3-isopropylmalate dehydratase small subunit; 100.0
PRK14023166 homoaconitate hydratase small subunit; Provisional 100.0
TIGR02084156 leud 3-isopropylmalate dehydratase, small subunit. 100.0
TIGR02087154 LEUD_arch 3-isopropylmalate dehydratase, small sub 100.0
COG0066191 LeuD 3-isopropylmalate dehydratase small subunit [ 100.0
PLN00072246 3-isopropylmalate isomerase/dehydratase small subu 100.0
PF00694131 Aconitase_C: Aconitase C-terminal domain CAUTION: 100.0
cd01579121 AcnA_Bact_Swivel Bacterial Aconitase-like swivel d 99.97
TIGR00171188 leuD 3-isopropylmalate dehydratase, small subunit. 99.97
PRK01641200 leuD isopropylmalate isomerase small subunit; Prov 99.97
cd0157791 IPMI_Swivel Aconatase-like swivel domain of 3-isop 99.95
cd0040488 Aconitase_swivel Aconitase swivel domain. Aconitas 99.95
PRK09238 835 bifunctional aconitate hydratase 2/2-methylisocitr 99.93
cd01674129 Homoaconitase_Swivel Homoaconitase swivel domain. 99.93
KOG0454502 consensus 3-isopropylmalate dehydratase (aconitase 99.9
cd01576131 AcnB_Swivel Aconitase B swivel domain. Aconitate h 99.89
TIGR00117 844 acnB aconitate hydratase 2. Aconitate hydratase (a 99.88
PRK14812119 hypothetical protein; Provisional 99.76
PLN00094 938 aconitate hydratase 2; Provisional 99.74
PF06434204 Aconitase_2_N: Aconitate hydratase 2 N-terminus; I 98.21
PF04412400 DUF521: Protein of unknown function (DUF521); Inte 95.55
COG1049 852 AcnB Aconitase B [Energy production and conversion 95.4
COG1679403 Predicted aconitase [General function prediction o 92.77
cd01355389 AcnX Putative Aconitase X catalytic domain. Putati 90.14
>KOG0452 consensus RNA-binding translational regulator IRP (aconitase superfamily) [RNA processing and modification; Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-282  Score=2292.79  Aligned_cols=887  Identities=73%  Similarity=1.205  Sum_probs=870.6

Q ss_pred             CCCccccccceecCCCCceeEEEeCCCCCCCCCCCCChhhHHHHhhhccccCccCccHHHHHHHHhhhcCCCCceeEeec
Q 002610            4 ENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFK   83 (900)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~rvlle~~~r~~~~~~~~~~~ie~il~~~~~~~~~~ei~~~   83 (900)
                      .+||....++|...+.  .++||+|++|. ..+++||||||||||+++||||++.|+++++|+||.|+...++..||+|+
T Consensus         6 ~~~f~~~~~~l~~~~~--~~kyf~l~~l~-~ryd~LP~SIrvLLEsAvRnCD~f~v~k~DVe~IldW~~t~~k~vEvpFk   82 (892)
T KOG0452|consen    6 ENPFAQLIETLPKPGG--VYKYFDLPKLN-SRYDKLPYSIRVLLESAVRNCDNFHVKKKDVENILDWKNTQKKQVEVPFK   82 (892)
T ss_pred             cccHHHHHhccCCCCC--cceeeeccccc-cccccCchhHHHHHHHHHhcCccceeeHHHHHHHhCccccCccceeeccc
Confidence            4789876778887754  79999999998 68999999999999999999999999999999999999877778899999


Q ss_pred             cceeeeecCCchhHHHHHHHHHHHHHHcCCCCCccCCCCCEEEEecCCCCCCCccchhHHHhhhHHHHHHhhhhhhhhhh
Q 002610           84 PARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW  163 (900)
Q Consensus        84 pdrvl~qD~tg~~a~~dlaamr~~~~~~G~dp~~inp~~pv~lviDH~v~~~~~~~~~a~~~n~~~e~~rn~ery~flk~  163 (900)
                      |+||++|||||+||+||||+|||+++++|+||+||||.+|+|||||||||+|+.++++|+++|+..||+||+|||.||||
T Consensus        83 PARViLQDFTGvPavVD~AaMRdAv~~lGgdp~KinP~cP~DLviDHSvQvDf~r~~~alqkN~~lEF~RNkERf~FlKW  162 (892)
T KOG0452|consen   83 PARVILQDFTGVPAVVDFAAMRDAVKNLGGDPEKINPLCPVDLVIDHSVQVDFARSADALQKNQELEFERNKERFTFLKW  162 (892)
T ss_pred             cceeeeecccCCchheeHHHHHHHHHHcCCCHHHcCCCCCcceEeeeeeEEeeccCHHHHhhcceeeeecchhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccceecCCCCcceeeeeecccceeeecCCCcccCCeEeecCCCCcccCccceeeccCChHHHHHHHcCCcEEeec
Q 002610          164 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVL  243 (900)
Q Consensus       164 ~~~~f~~~~~~ppg~GI~Hqv~lE~la~~v~~~~G~~~PdtvvGtDSHT~~~galG~lg~GVGg~ea~~~m~g~~~~~~v  243 (900)
                      +.++|+|+.++|||+||+||||||||||||+..++++|||++|||||||||++|||++||||||||+|++|+|||++|.+
T Consensus       163 gs~af~NmlivPPGsGivHQvNLEYLaRvVF~~~~~lyPDSvVGTDSHtTMidGlGvlGWGVGGIEaEAvMLGqpiSmvl  242 (892)
T KOG0452|consen  163 GSRAFDNMLIVPPGSGIVHQVNLEYLARVVFESKDLLYPDSVVGTDSHTTMIDGLGVLGWGVGGIEAEAVMLGQPISMVL  242 (892)
T ss_pred             hhHhhcceEEeCCCCceeEEeehhhhhheeeccCceecccccccccCcceeecccceeeccccceehhhhhhcCchheec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEEecccCCCCChhhHHHHHHHHHHHcCccceEEEEecCcccccChhhhhhhhccCcccCcceeeecCChHHHHH
Q 002610          244 PGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQY  323 (900)
Q Consensus       244 PevvgV~L~G~L~~gVtakDliL~i~~~L~~~G~~gk~VEf~G~gv~~LS~~dR~TIaNMa~E~GAt~g~fp~De~t~~Y  323 (900)
                      |+|||++|+|+|+++||++||+|+||++||+.|++||||||||+|+++||++||+||+||+||||||.||||+|+.|+.|
T Consensus       243 P~ViG~~L~Gkl~~~vTstDlVLtiTk~LRq~GVvGKFVEF~G~Gva~LSiaDRaTIaNMcPEYGAt~gfFPvD~vtl~y  322 (892)
T KOG0452|consen  243 PEVIGYKLTGKLSPLVTSTDLVLTITKHLRQLGVVGKFVEFFGPGVAELSIADRATIANMCPEYGATMGFFPVDEVTLQY  322 (892)
T ss_pred             ccceeEEeccccCCCceeehhhhhHHHHHHHhccceeeEEEecCccceechhhhhhhhhcCccccceeeeeccchhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCcchHHHHHHHHHHhhccccCCCCCCCCcccEEEEEEcCCcccccccCCCCCCcccccccchhhhhhhcccccC
Q 002610          324 LKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF  403 (900)
Q Consensus       324 L~~tgr~~~~~~~~e~y~~~~~l~~~~~~~D~~a~Y~~~ieiDLs~veP~vAgP~~P~~~~~l~e~~~~~~~~~~~~~~~  403 (900)
                      |+.|||+++.++.+|+|+|+.++|+++..++.++.|++++++||++|+|+|+||+||+|+++|++|+++|..||++++|+
T Consensus       323 l~~Tgrs~~~~~~i~~yLka~~~f~~~~~~~q~p~yt~~l~l~L~~vvp~vSGPKRPhDrV~v~dmk~Df~scL~~~vgF  402 (892)
T KOG0452|consen  323 LKQTGRSEEKLDIIEKYLKAVKMFRDYNDPSQDPVYTQVLELDLGTVVPSVSGPKRPHDRVAVSDMKADFHSCLDSKVGF  402 (892)
T ss_pred             HHHcCCcHHHHHHHHHHHHHHhhhhhccCcccCcceeeEEEEecCceeeccCCCCCCccccchhhHHHHHHHhhcCcccc
Confidence            99999999999999999999999999888888899999999999999999999999999999999999999999999999


Q ss_pred             CCccCccccccccceeccCCCcccccCCceEEEEeecCCCCCChHHHHHHHHHHHHHHhcCCccCCceeEEEecCCHHHH
Q 002610          404 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVT  483 (900)
Q Consensus       404 ~g~~~~~~~~~~~~~~~~~g~~~~l~~g~V~~a~IgSCTN~s~~dl~~aA~lLak~A~~~G~kv~p~Vk~~v~PgS~~V~  483 (900)
                      ||+.++++.+++...+.|+|++++|.||+|+||+|+||||+|||++|++|+||||||+++|++|+||+|||++|||.+|+
T Consensus       403 KgFai~~e~q~~~v~f~~~g~~~~l~HGsVVIAAitSCTNtsNPSVMlgAgLlAKkAv~~GL~v~PyikTSLsPGSgvVt  482 (892)
T KOG0452|consen  403 KGFAIAPEAQSKSVEFQYDGTTAKLKHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVELGLNVKPYIKTSLSPGSGVVT  482 (892)
T ss_pred             cccccChhHhhceEEEEECCeeeEeccCcEEEEEEecccCCCCcHHhhhhhHHHHHHHhcCceecceeecccCCCCchhh
Confidence            99999998888888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHhcCcEEeccCcccccCCCCCCchHHHhhhccCceEEEEeeccCCCCCCCCCCCCCceEecChHHHHH
Q 002610          484 KYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVA  563 (900)
Q Consensus       484 ~~l~~~Gl~~~l~~aG~~i~~~GC~~CiG~~g~l~~~~~~~i~~~~~~~~~vsS~NRNF~GR~g~~~~~~yLaSP~lVaA  563 (900)
                      .||.++|++++|+++||.|+||||+|||||||+|.+++.++|++|++++++|+|||||||||+||.+++||||||+||+|
T Consensus       483 ~YL~~SGv~pyL~klGF~IvGYGC~TCiGNsgpl~e~V~~ai~~ndlV~~gvLSGNrNFEGRvhp~tRANYLASPpLvva  562 (892)
T KOG0452|consen  483 KYLSESGVLPYLEKLGFDIVGYGCMTCIGNSGPLDEAVVNAIEQNDLVAAGVLSGNRNFEGRVHPNTRANYLASPPLVVA  562 (892)
T ss_pred             hhhhhccchhHHHhcCceeeccccceeccCCCCCCHHHHHhhhcCCeEEEEEeecCCCccccccccchhhhccCchHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccccccCCCCCCcccCCCCceeecccCCCChHHHHHHhhhccCchhhhhhcccccCCCcccccccCCCCCccccCCC
Q 002610          564 YALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPK  643 (900)
Q Consensus       564 ~AlaG~i~~d~~~~plg~~~~G~~v~l~diwP~~~ei~~~~~~~~~~~~f~~~y~~i~~~~~~w~~l~~~~~~~~~w~~~  643 (900)
                      |||||+++||+++||||+++||+.|||+||||+++||+++++++|.|+||++.|+.|..|++.|+.|++|++.+|+||++
T Consensus       563 YaiaGtV~IDfe~eplg~~~~Gk~vfl~DIWPtr~Ev~~ve~~~Vip~mFk~~y~~I~~gn~~Wn~L~~p~~~Ly~Wd~~  642 (892)
T KOG0452|consen  563 YAIAGTVNIDFETEPLGVDPDGKNVFLRDIWPTREEVAEVEEEHVIPSMFKEVYEKIELGNPDWNQLEVPSSKLYPWDPK  642 (892)
T ss_pred             hhhcceeecceeccccccCCCCCeEEEeecCCCHHHHHHHHHhcccHHHHHHHHHHHhhcChhhhhccCCccceeccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCCCCCCCCCCCCccccceEEeecCCCCCcCcccCCCCCCCCChHhhHHHHcCCCCcCCCccccCCCchhhh
Q 002610          644 STYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIM  723 (900)
Q Consensus       644 styi~~pp~f~~~~~~~~~~~~i~~a~vL~~~gD~itTDhIsPaG~i~~~spa~~~L~~~g~~~~~fn~ygsrrgN~evm  723 (900)
                      ||||++||||++|+.+++.+++|++|+||+.|||+||||||||||+|.++|||+|||.+||++|+|||||||||||+|||
T Consensus       643 STYI~~ppfF~~mT~~~p~~~~i~~A~~LLnlGDSvTTDHISPAGsI~r~SpAAr~L~~Rg~tprdFNsYGsRRGND~vM  722 (892)
T KOG0452|consen  643 STYIKEPPFFEGMTRDLPGPQSIEDAYCLLNLGDSVTTDHISPAGSIARTSPAARYLTERGLTPRDFNSYGSRRGNDAVM  722 (892)
T ss_pred             CceecCCccccccccCCCCcccccceeEEEeccCcccccccCCCccccccCHHHHHHHhcCCChhhccccccccCchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccchhhhhhhcCCCCCCceeecCCCcccccchHHHHHHhcCCceEEEeCCccCCCCcchhhhccccccCceEEEec
Q 002610          724 ARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAK  803 (900)
Q Consensus       724 ~rg~F~n~r~~N~l~~~~~g~~t~~~p~g~~~~i~~aa~~y~~~g~~~IiVAG~nyG~GSSRE~Aa~~~~~lGVraVIA~  803 (900)
                      .||||+|||+.|+++. +.||.|+|+|+||.+.|||||++|+++|.|+||+||++||||||||||||+|.+|||||||||
T Consensus       723 aRGTFANIrlvNkl~~-k~gP~TvHiPsge~ldvFdAA~~Y~~~g~p~iilaGkeYGsGsSRDWAAKGP~LlGvKAViae  801 (892)
T KOG0452|consen  723 ARGTFANIRLVNKLLS-KVGPKTVHIPSGEELDVFDAAERYKSEGIPLIILAGKEYGSGSSRDWAAKGPFLLGVKAVIAE  801 (892)
T ss_pred             hcccchhhHHHHHHhc-ccCCceEecCCCCeecHhhHHHHHHhcCCceEEEeccccCCCCccchhhcCchhhhhHHHHHH
Confidence            9999999999999985 899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhhhhcccCcccccccCCccchhhccCCCCeEEEEeCCCCcccCCCCceEEEEcCCCEEEEEEecCCCHHHHHHHH
Q 002610          804 SFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFD  883 (900)
Q Consensus       804 SFarIh~~Nli~~GiLpL~f~~~~~~~~l~l~g~e~~~Idl~~~~~~~~~~~~v~v~~~~G~~f~~~~~~~t~~e~~~~~  883 (900)
                      |||||||+||++|||+||+|.+++++++|+|+|.|.++|.+++.  .++||+.++|+..+|+.|.+++||||+.|+.||+
T Consensus       802 S~ErIHrsnLvGmGIiPl~f~~Ge~AdtLgLtG~E~yti~lP~~--~lkPgq~i~v~~dtGk~F~~~~rFdteVeltyy~  879 (892)
T KOG0452|consen  802 SYERIHRSNLVGMGIIPLQFLPGEDADTLGLTGRERYTIHLPEN--ILKPGQDITVTTDTGKVFVCTLRFDTEVELTYYK  879 (892)
T ss_pred             HHHHHHhhccccceeeeeeecCCCChhhcCcccceeEEEECCcc--cCCCCceEEEEecCCcEEEEEEEecceEEEEEEe
Confidence            99999999999999999999999999999999999999999984  3899999999988999999999999999999999


Q ss_pred             hcCHHHHHHHHHh
Q 002610          884 HGGILQYVIRNLI  896 (900)
Q Consensus       884 aGGiL~yv~~~~~  896 (900)
                      +||||||+.|++.
T Consensus       880 ~GGiL~y~iRk~~  892 (892)
T KOG0452|consen  880 NGGILNYMIRKLS  892 (892)
T ss_pred             cCCcHHHHHhhcC
Confidence            9999999999873

>PLN00070 aconitate hydratase Back     alignment and domain information
>PTZ00092 aconitate hydratase-like protein; Provisional Back     alignment and domain information
>TIGR01341 aconitase_1 aconitate hydratase 1 Back     alignment and domain information
>PRK12881 acnA aconitate hydratase; Provisional Back     alignment and domain information
>PRK09277 aconitate hydratase; Validated Back     alignment and domain information
>TIGR02333 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe/S-dependent Back     alignment and domain information
>COG1048 AcnA Aconitase A [Energy production and conversion] Back     alignment and domain information
>TIGR01340 aconitase_mito aconitate hydratase, mitochondrial Back     alignment and domain information
>PRK07229 aconitate hydratase; Validated Back     alignment and domain information
>TIGR01342 acon_putative aconitate hydratase, putative, Aquifex type Back     alignment and domain information
>TIGR00139 h_aconitase homoaconitase Back     alignment and domain information
>PRK11413 putative hydratase; Provisional Back     alignment and domain information
>KOG0453 consensus Aconitase/homoaconitase (aconitase superfamily) [Energy production and conversion; Amino acid transport and metabolism] Back     alignment and domain information
>cd01586 AcnA_IRP Aconitase A catalytic domain Back     alignment and domain information
>TIGR00170 leuC 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>PRK12466 isopropylmalate isomerase large subunit; Provisional Back     alignment and domain information
>PRK05478 isopropylmalate isomerase large subunit; Validated Back     alignment and domain information
>PF00330 Aconitase: Aconitase family (aconitate hydratase); InterPro: IPR001030 Aconitase (aconitate hydratase; 4 Back     alignment and domain information
>cd01584 AcnA_Mitochondrial Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>cd01583 IPMI 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate Back     alignment and domain information
>TIGR01343 hacA_fam homoaconitate hydratase family protein Back     alignment and domain information
>PRK00402 3-isopropylmalate dehydratase large subunit; Reviewed Back     alignment and domain information
>TIGR02086 IPMI_arch 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>TIGR02083 LEU2 3-isopropylmalate dehydratase, large subunit Back     alignment and domain information
>COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] Back     alignment and domain information
>cd01581 AcnB Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle Back     alignment and domain information
>cd01582 Homoaconitase Homoaconitase and other uncharacterized proteins of the Aconitase family Back     alignment and domain information
>cd01351 Aconitase Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle Back     alignment and domain information
>PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated Back     alignment and domain information
>TIGR00117 acnB aconitate hydratase 2 Back     alignment and domain information
>PLN00094 aconitate hydratase 2; Provisional Back     alignment and domain information
>cd01580 AcnA_IRP_Swivel Aconitase A swivel domain Back     alignment and domain information
>COG1049 AcnB Aconitase B [Energy production and conversion] Back     alignment and domain information
>KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] Back     alignment and domain information
>cd01578 AcnA_Mitochon_Swivel Mitochondrial aconitase A swivel domain Back     alignment and domain information
>PRK00439 leuD 3-isopropylmalate dehydratase small subunit; Reviewed Back     alignment and domain information
>PRK14023 homoaconitate hydratase small subunit; Provisional Back     alignment and domain information
>TIGR02084 leud 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>TIGR02087 LEUD_arch 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>COG0066 LeuD 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] Back     alignment and domain information
>PLN00072 3-isopropylmalate isomerase/dehydratase small subunit; Provisional Back     alignment and domain information
>PF00694 Aconitase_C: Aconitase C-terminal domain CAUTION: The Prosite patterns do not match this domain Back     alignment and domain information
>cd01579 AcnA_Bact_Swivel Bacterial Aconitase-like swivel domain Back     alignment and domain information
>TIGR00171 leuD 3-isopropylmalate dehydratase, small subunit Back     alignment and domain information
>PRK01641 leuD isopropylmalate isomerase small subunit; Provisional Back     alignment and domain information
>cd01577 IPMI_Swivel Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins Back     alignment and domain information
>cd00404 Aconitase_swivel Aconitase swivel domain Back     alignment and domain information
>PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated Back     alignment and domain information
>cd01674 Homoaconitase_Swivel Homoaconitase swivel domain Back     alignment and domain information
>KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] Back     alignment and domain information
>cd01576 AcnB_Swivel Aconitase B swivel domain Back     alignment and domain information
>TIGR00117 acnB aconitate hydratase 2 Back     alignment and domain information
>PRK14812 hypothetical protein; Provisional Back     alignment and domain information
>PLN00094 aconitate hydratase 2; Provisional Back     alignment and domain information
>PF06434 Aconitase_2_N: Aconitate hydratase 2 N-terminus; InterPro: IPR015929 Aconitase (aconitate hydratase; 4 Back     alignment and domain information
>PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins Back     alignment and domain information
>COG1049 AcnB Aconitase B [Energy production and conversion] Back     alignment and domain information
>COG1679 Predicted aconitase [General function prediction only] Back     alignment and domain information
>cd01355 AcnX Putative Aconitase X catalytic domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query900
3snp_A908 Crystal Structure Analysis Of Iron Regulatory Prote 0.0
2b3x_A888 Structure Of An Orthorhombic Crystal Form Of Human 0.0
1ami_A754 Steric And Conformational Features Of The Aconitase 7e-52
1aco_A754 Crystal Structure Of Aconitase With Transaconitate 8e-52
1c96_A753 S642a:citrate Complex Of Aconitase Length = 753 9e-52
1nis_A754 Crystal Structure Of Aconitase With Trans-Aconitate 1e-51
5acn_A754 Structure Of Activated Aconitase. Formation Of The 2e-51
1b0j_A754 Crystal Structure Of Aconitase With Isocitrate Leng 4e-51
1c97_A753 S642a:isocitrate Complex Of Aconitase Length = 753 4e-51
1b0m_A753 Aconitase R644q:fluorocitrate Complex Length = 753 8e-51
2pkp_A170 Crystal Structure Of 3-Isopropylmalate Dehydratase 7e-07
1v7l_A163 Structure Of 3-Isopropylmalate Isomerase Small Subu 7e-06
>pdb|3SNP|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In Complex With Ferritin H Ire Rna Length = 908 Back     alignment and structure 
Iteration: 1

 Score = 1107 bits (2863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/891 (58%), Positives = 672/891 (75%), Gaps = 6/891 (0%)
Query: 5   NPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDV 64
           NPF  + + L     G+  K+++L  L+  R  +LP+SI++LLE+A+RNCD+F VK +D+
Sbjct: 22  NPFAYLAEPLDPAQPGK--KFFNLNKLDYSRYGRLPFSIRVLLEAAVRNCDKFLVKKEDI 79
Query: 65  EKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPV 124
           E I++W  T    +E+PFKPARV+LQDFTGVP+VVD A MRDA+ KLGGD  KINP+ PV
Sbjct: 80  ENILNWNVTQHMNIEVPFKPARVILQDFTGVPSVVDFAAMRDAVKKLGGDPEKINPICPV 139
Query: 125 DLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQV 184
           DLVIDHS+QVD  R  +++Q N + EF RN+ERF FLKWGS AF NM ++PPGSGI+HQV
Sbjct: 140 DLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSKAFRNMRIIPPGSGIIHQV 199
Query: 185 NLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSMVLP 244
           NLEYL RVVF+ +G  YPDS+VGTDSHTTMID                 MLGQP+SMVLP
Sbjct: 200 NLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGVLGWGVGGIEAEAVMLGQPISMVLP 259
Query: 245 GVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMS 304
            V+G++L GK    VT+TD+VLT+T+ LR+ GVVG FVEF+G G+++LS+ADRATIANM 
Sbjct: 260 QVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMC 319
Query: 305 PEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLE 364
           PEYGAT  FFPVD V+++YL  TGR +  V  I  YL+A  MF DYS+P  +  ++  +E
Sbjct: 320 PEYGATATFFPVDEVSIKYLVQTGRDESKVKQIRKYLQAVGMFRDYSDPSQDPDFTQVVE 379
Query: 365 LNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGT 424
           L+L+ VVPC SGPKRP D+V +++MK D+ +CL  + GFKGF +  ++ +    F ++ +
Sbjct: 380 LDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPDHHNDHKTFIYNDS 439
Query: 425 PAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTK 484
              L HG VVIAAITS TNTSNPSVMLGA L+AKKA + GL VKP++KTSL+PGSGVVT 
Sbjct: 440 EFTLSHGSVVIAAITSSTNTSNPSVMLGAGLLAKKAVDAGLNVKPYVKTSLSPGSGVVTY 499
Query: 485 YLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEG 544
           YL+ SG+  YL+ LGF +VGYG  TCIGNSG + + V  AIT+ D+VA  VLSGNRNFEG
Sbjct: 500 YLRESGVMPYLSQLGFDVVGYGSMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEG 559
Query: 545 RVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVV 604
           RVHP TRANYLASPPLV+AYA+AG++ IDFE EP+G    G+++FLRDIWP+ EE+  V 
Sbjct: 560 RVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGTNAKGQQVFLRDIWPTREEIQAVE 619
Query: 605 QKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPH 664
           ++ V+P MF   Y+ I   N  WN L+ PS  LY W+PKSTYI  PP+F+++T+    P 
Sbjct: 620 RQYVIPGMFTEVYQKIETVNASWNALAAPSDKLYLWNPKSTYIKSPPFFENLTLDLQPPK 679
Query: 665 GVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMA 724
            +  AY LLN GDS+TTDHISPAG+I ++SPAA+YL  RG+  R+FNSYGSRRGND IMA
Sbjct: 680 SIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAIMA 739
Query: 725 RGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSS 784
           RGTFANIRL+N+ LN +  P+TIH+P+GE L VFDAA RY+ EGH  ++LAG EYGSGSS
Sbjct: 740 RGTFANIRLLNRFLNKQ-APQTIHLPSGETLDVFDAAERYQQEGHPLIVLAGKEYGSGSS 798
Query: 785 RDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDL 844
           RDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL + PGE+A++ GLTG ERYTI +
Sbjct: 799 RDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADSLGLTGRERYTIII 858
Query: 845 PSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 895
           P +++   P   V+V  D+GK+F  VIRFDT+VEL YF +GGIL Y+IR +
Sbjct: 859 PENLT---PRMHVQVKLDTGKTFQAVIRFDTDVELTYFHNGGILNYMIRKM 906
>pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human Cytosolic Aconitase (Irp1) Length = 888 Back     alignment and structure
>pdb|1AMI|A Chain A, Steric And Conformational Features Of The Aconitase Mechanism Length = 754 Back     alignment and structure
>pdb|1ACO|A Chain A, Crystal Structure Of Aconitase With Transaconitate Bound Length = 754 Back     alignment and structure
>pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase Length = 753 Back     alignment and structure
>pdb|1NIS|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And Nitrocitrate Bound Length = 754 Back     alignment and structure
>pdb|5ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The (4fe-4s) Cluster In The Crystal Length = 754 Back     alignment and structure
>pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate Length = 754 Back     alignment and structure
>pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase Length = 753 Back     alignment and structure
>pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex Length = 753 Back     alignment and structure
>pdb|2PKP|A Chain A, Crystal Structure Of 3-Isopropylmalate Dehydratase (Leud) From Methhanocaldococcus Jannaschii Dsm2661 (Mj1271) Length = 170 Back     alignment and structure
>pdb|1V7L|A Chain A, Structure Of 3-Isopropylmalate Isomerase Small Subunit From Pyrococcus Horikoshii Length = 163 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query900
2b3y_A888 Iron-responsive element binding protein 1; IRP1 IR 0.0
1c96_A753 Mitochondrial aconitase; lyase, tricarboxylic acid 0.0
1l5j_A865 Aconitate hydratase 2; molecular recognition, RNA 2e-38
1v7l_A163 3-isopropylmalate dehydratase small subunit; beta 3e-17
2pkp_A170 Homoaconitase small subunit; beta barrel, amino-ac 3e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
2hcu_A213 3-isopropylmalate dehydratase small subunit; beta 5e-06
3h5j_A171 3-isopropylmalate dehydratase small subunit; leuci 9e-06
3q3w_A203 3-isopropylmalate dehydratase small subunit; struc 7e-05
>2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A Length = 888 Back     alignment and structure
 Score = 1738 bits (4503), Expect = 0.0
 Identities = 539/892 (60%), Positives = 685/892 (76%), Gaps = 6/892 (0%)

Query: 5   NPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDV 64
           NPF  + + L     G+  K+++L  L D R  +LP+SI++LLE+AIRNCDEF VK +D+
Sbjct: 2   NPFAHLAEPLDPVQPGK--KFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDI 59

Query: 65  EKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPV 124
           E I+ W  T  K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLGGD  KINP+ P 
Sbjct: 60  ENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPA 119

Query: 125 DLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQV 184
           DLVIDHS+QVD  R  +++Q N + EF RN+ERF FLKWGS AFHNM ++PPGSGI+HQV
Sbjct: 120 DLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQV 179

Query: 185 NLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLP 244
           NLEYL RVVF+ +G  YPDS+VGTDSHTTMIDGLG+ GWGVGGIEAEA MLGQP+SMVLP
Sbjct: 180 NLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLP 239

Query: 245 GVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMS 304
            V+G++L GK    VT+TD+VLT+T+ LR+ GVVG FVEF+G G+++LS+ADRATIANM 
Sbjct: 240 QVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMC 299

Query: 305 PEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLE 364
           PEYGAT  FFPVD V++ YL  TGR ++ +  I+ YL+A  MF D+++P  +  ++  +E
Sbjct: 300 PEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVE 359

Query: 365 LNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGT 424
           L+L+ VVPC SGPKRP D+V +++MK D+ +CL  + GFKGF +  E+ +    F +  T
Sbjct: 360 LDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNT 419

Query: 425 PAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTK 484
              L HG VVIAAITSCTNTSNPSVMLGA L+AKKA + GL V P+IKTSL+PGSGVVT 
Sbjct: 420 EFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTY 479

Query: 485 YLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEG 544
           YLQ SG+  YL+ LGF +VGYGC TCIGNSG + + V  AIT+ D+VA  VLSGNRNFEG
Sbjct: 480 YLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEG 539

Query: 545 RVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVV 604
           RVHP TRANYLASPPLV+AYA+AG++ IDFE EP+GV   G+++FL+DIWP+ +E+  V 
Sbjct: 540 RVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVE 599

Query: 605 QKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDMTMSPPGPH 664
           ++ V+P MFK  Y+ I   N  WN L+ PS  L+ W+ KSTYI  PP+F+++T+    P 
Sbjct: 600 RQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSKSTYIKSPPFFENLTLDLQPPK 659

Query: 665 GVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMA 724
            +  AY LLN GDS+TTDHISPAG+I ++SPAA+YL  RG+  R+FNSYGSRRGND +MA
Sbjct: 660 SIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMA 719

Query: 725 RGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSS 784
           RGTFANIRL+N+ LN +  P+TIH+P+GE L VFDAA RY+  G   ++LAG EYG+GSS
Sbjct: 720 RGTFANIRLLNRFLNKQ-APQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSS 778

Query: 785 RDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDL 844
           RDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL + PGE+A+  GLTG ERYTI +
Sbjct: 779 RDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIII 838

Query: 845 PSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLI 896
           P     ++P   V+V  D+GK+F  V+RFDT+VEL YF +GGIL Y+IR + 
Sbjct: 839 P---ENLKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFLNGGILNYMIRKMA 887
>1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A Length = 753 Back     alignment and structure
>1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Length = 865 Back     alignment and structure
>1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 Length = 163 Back     alignment and structure
>2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii} Length = 170 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} Length = 213 Back     alignment and structure
>3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A Length = 171 Back     alignment and structure
>3q3w_A 3-isopropylmalate dehydratase small subunit; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE; 1.89A {Campylobacter jejuni} Length = 203 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 900
d2b3ya2629 c.83.1.1 (A:2-630) Iron-responsive element binding 0.0
d1acoa2527 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain 1e-114
d2b3ya1259 c.8.2.1 (A:631-889) ron-responsive element binding 7e-95
d1l5ja3490 c.83.1.1 (A:373-862) Aconitase B, C-terminal domai 6e-68
d1acoa1226 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain 3e-53
d1v7la_162 c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyroc 4e-24
>d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 629 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Aconitase iron-sulfur domain
superfamily: Aconitase iron-sulfur domain
family: Aconitase iron-sulfur domain
domain: Iron-responsive element binding protein 1, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  742 bits (1917), Expect = 0.0
 Identities = 381/630 (60%), Positives = 482/630 (76%), Gaps = 2/630 (0%)

Query: 5   NPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDV 64
           NPF  + + L     G+  K+++L  L D R  +LP+SI++LLE+AIRNCDEF VK +D+
Sbjct: 2   NPFAHLAEPLDPVQPGK--KFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDI 59

Query: 65  EKIIDWETTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPV 124
           E I+ W  T  K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLGGD  KINP+ P 
Sbjct: 60  ENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPA 119

Query: 125 DLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQV 184
           DLVIDHS+QVD  R  +++Q N + EF RN+ERF FLKWGS AFHNM ++PPGSGI+HQV
Sbjct: 120 DLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQV 179

Query: 185 NLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLP 244
           NLEYL RVVF+ +G  YPDS+VGTDSHTTMIDGLG+ GWGVGGIEAEA MLGQP+SMVLP
Sbjct: 180 NLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLP 239

Query: 245 GVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMS 304
            V+G++L GK    VT+TD+VLT+T+ LR+ GVVG FVEF+G G+++LS+ADRATIANM 
Sbjct: 240 QVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMC 299

Query: 305 PEYGATMGFFPVDHVTLQYLKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLE 364
           PEYGAT  FFPVD V++ YL  TGR ++ +  I+ YL+A  MF D+++P  +  ++  +E
Sbjct: 300 PEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVE 359

Query: 365 LNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKVAEFNFHGT 424
           L+L+ VVPC SGPKRP D+V +++MK D+ +CL  + GFKGF +  E+ +    F +  T
Sbjct: 360 LDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNT 419

Query: 425 PAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTK 484
              L HG VVIAAITSCTNTSNPSVMLGA L+AKKA + GL V P+IKTSL+PGSGVVT 
Sbjct: 420 EFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTY 479

Query: 485 YLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEG 544
           YLQ SG+  YL+ LGF +VGYGC TCIGNSG + + V  AIT+ D+VA  VLSGNRNFEG
Sbjct: 480 YLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEG 539

Query: 545 RVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVV 604
           RVHP TRANYLASPPLV+AYA+AG++ IDFE EP+GV   G+++FL+DIWP+ +E+  V 
Sbjct: 540 RVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVE 599

Query: 605 QKSVLPDMFKATYEAITKGNPMWNQLSVPS 634
           ++ V+P MFK  Y+ I   N  WN L+ PS
Sbjct: 600 RQYVIPGMFKEVYQKIETVNESWNALATPS 629
>d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 527 Back     information, alignment and structure
>d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259 Back     information, alignment and structure
>d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 490 Back     information, alignment and structure
>d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 226 Back     information, alignment and structure
>d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} Length = 162 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query900
d2b3ya2629 Iron-responsive element binding protein 1, N-termi 100.0
d1acoa2527 Aconitase A, N-terminal domain {Cow (Bos taurus) [ 100.0
d1l5ja3490 Aconitase B, C-terminal domain {Escherichia coli [ 100.0
d2b3ya1259 ron-responsive element binding protein 1, C-termin 100.0
d1acoa1226 Aconitase A, C-terminal domain {Cow (Bos taurus) [ 100.0
d1v7la_162 Isopropylmalate isomerase LeuD {Pyrococcus horikos 100.0
d1l5ja2212 Aconitase B, second N-terminal domain {Escherichia 97.48
>d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Aconitase iron-sulfur domain
superfamily: Aconitase iron-sulfur domain
family: Aconitase iron-sulfur domain
domain: Iron-responsive element binding protein 1, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=1574.35  Aligned_cols=629  Identities=60%  Similarity=1.058  Sum_probs=605.0

Q ss_pred             CCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             99710012410069997225997178999999898981357787421025595676399999998311499994058412
Q 002610            4 ENPFKSILKTLQRPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKDVEKIIDWETTSPKQVEIPFK   83 (900)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lP~s~rvllEn~lR~~~~~~~~~~~ie~il~~~~~~~~~~ei~~~   83 (900)
                      .|||+...++|+..+.  .++||+|+++.+.++++|||||||||||+|||||+..++++++++|++|......+.||+|+
T Consensus         1 ~~~f~~~~~~~~~~~~--~~~~~~l~~l~~~~~~~lP~s~rillEn~lr~~~~~~v~~~~i~~~~~~~~~~~~~~ei~f~   78 (629)
T d2b3ya2           1 SNPFAHLAEPLDPVQP--GKKFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDIENILHWNVTQHKNIEVPFK   78 (629)
T ss_dssp             CCTTGGGEEESCTTST--TCEEECGGGGCCTTGGGSCHHHHHHHHHHHHTCCSSSSCHHHHHHHHTHHHHTTTTCEEEEC
T ss_pred             CCCHHHHHHHCCCCCC--CCEEECHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEECCC
T ss_conf             9845777631045788--75373378955157665884299999898870688757999999997233568988744603


Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             55345306873669998999999999909998743788877999368887797552669985149999994431113311
Q 002610           84 PARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEFEFRRNKERFAFLKW  163 (900)
Q Consensus        84 pdrvl~qD~tg~~a~~dlaamr~~~~~~G~dp~~i~p~~pv~lviDHsv~~~~~~~~~a~~~n~~~e~~rn~ery~flkw  163 (900)
                      ||||+||||||+|+++|||+|||+++++|+||.+|||.+||+|+||||||+++++++++++.|+.+||+||.|||+||||
T Consensus        79 p~rv~lqD~tg~~a~~dlaamrda~~~~g~dp~~i~p~~p~~lviDHsv~~~~~~~~~~~~~n~~~e~~rn~er~~fl~w  158 (629)
T d2b3ya2          79 PARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKW  158 (629)
T ss_dssp             CSEEEEEHHHHHHHHHHHHHHHHHHHHTTCCGGGSSCSSCEEEECCSSCCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf             24034232557539999998799999707990103789863299778767615888026663301344302788888999


Q ss_pred             CCCCCCCCEECCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEC
Q ss_conf             01124663020899861001320101204542798224783762389875567553042257868999999279078445
Q 002610          164 GSNAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGMLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVL  243 (900)
Q Consensus       164 ~~~~f~~~~v~ppG~GI~Hqv~lE~la~~v~~~~G~~~PdtivGtDSHT~~~galG~la~GVGg~ea~aamlg~~~~~~v  243 (900)
                      ++++|+||+|+|||+|||||||+||||++|+.++|+++|||||||||||||+||||+|||||||+|++++|+|||+||++
T Consensus       159 ~~~~~~~~~~~pPg~GI~HQvnlE~la~~v~~~~~~~~pdtlVGtDSHT~~~GalG~lg~GVGg~Eae~amlg~~~~~~v  238 (629)
T d2b3ya2         159 GSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVL  238 (629)
T ss_dssp             HHHHSTTEEEECTTSCCHHHHHHHTTCCSEEEETTEEEECEEEESSGGGGGGGGGTCEEEECCHHHHHHHHTTCCEEEEC
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHCCCEEEEC
T ss_conf             99886346221355425667788875046537788587314996478865000320054686669999998379079953


Q ss_pred             CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHH
Q ss_conf             81899999611699987212899999999974821059999438666669111132302482238502000278578999
Q 002610          244 PGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGMFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQY  323 (900)
Q Consensus       244 PevVgV~L~G~L~~gvtakDivL~i~~~Lr~~g~vgk~VEf~G~gv~~Ls~~dR~TIaNMa~E~GAt~g~fp~D~~t~~Y  323 (900)
                      ||||||+|+|+|++|||||||||+|+++||++|++||||||+|||+++||++||||||||+|||||||||||+|++|++|
T Consensus       239 Pevvgv~L~G~L~~gVtakDliL~i~~~L~~~G~vgk~VEF~G~gi~~LS~~dRaTI~NMa~E~GAt~gifp~De~T~~Y  318 (629)
T d2b3ya2         239 PQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITY  318 (629)
T ss_dssp             CCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHCCTTCEEEEESGGGTTSCHHHHHHHHHTHHHHTCSEEECCCCHHHHHH
T ss_pred             CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHH
T ss_conf             73689999940599966507898887885407755189874066111068878656642002137569997504614664


Q ss_pred             HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
Q ss_conf             83029984058999999998000124899999982027999986984100006999998423664420156531154567
Q 002610          324 LKLTGRSDDTVSMIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGF  403 (900)
Q Consensus       324 L~~tgr~~~~~~~~e~y~~~~~l~~~~~~~d~~a~Y~~~i~iDLs~ieP~vAgP~~P~~~~~l~e~~~~~~~~~~~~~~~  403 (900)
                      |+.|||++++++++++|.++|++|++...+|++|.|+++++||||+|+|+||||++|||+++|++++.+|..++..+.+.
T Consensus       319 L~~tgR~~~~~~~ve~y~~a~~l~~~~~~~d~da~Y~~vieiDLs~veP~VAgP~~P~d~v~l~e~~~~~~~~l~~~~~~  398 (629)
T d2b3ya2         319 LVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGF  398 (629)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHHTCCCCTTCGGGCCCCSEEEEEEGGGCCSEEECSSCTTCEEEGGGHHHHHHHHHHSCSBT
T ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHH
T ss_conf             44201341111145677778776411022466667642999866680242578997666158876676866643355432


Q ss_pred             CCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHH
Q ss_conf             77567500112221002489864225775689985157899986799999999999985699338862199952879999
Q 002610          404 KGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVT  483 (900)
Q Consensus       404 ~~~~i~~~~~~~~~~~~~~g~~~~l~~g~V~~a~IgSCTN~s~~dl~~aA~lLa~~A~~~G~kv~p~Vk~~v~PgS~~V~  483 (900)
                      +++..+.+.......+.+++.++.+.||+|+||||||||||||||+|+||+|||+||+++|++++||||++|+|||++|+
T Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~V~ia~IgSCTN~s~~dl~~AA~lLa~kaV~~Gl~v~p~Vk~~v~PGS~~V~  478 (629)
T d2b3ya2         399 KGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVT  478 (629)
T ss_dssp             TBCCCCGGGTTCEEEEEETTEEEEEETTBEEEEEECCHHHHTCHHHHHHHHHHHHHHHHTTCCCCTTSEEEECCSSHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHH
T ss_conf             01211333333333332036322345774779999667788817899999998402553398405536688853603323


Q ss_pred             HHHHHCCCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCHHHHHH
Q ss_conf             99998591799983593994357633447989996578864114962788751157777898798778607429588988
Q 002610          484 KYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVA  563 (900)
Q Consensus       484 ~~l~~~Gl~~~l~~aG~~i~~~GC~~CiG~~g~l~~~~~~~i~~~~~~~~~V~S~NRNF~GR~g~~~~~~yLaSP~lVaA  563 (900)
                      +||+++||+++|+++||+|++|||++||||+|+++++++++|.++++++++||||||||+|||||..+++|||||+||||
T Consensus       479 ~~le~~Gl~~~L~~aGf~i~~~GC~~CiGnsGpl~~~~~~~i~~gdl~~~~V~S~NRNFeGR~g~~~~~~yLaSP~lVaA  558 (629)
T d2b3ya2         479 YYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIA  558 (629)
T ss_dssp             HHHHHTSCHHHHHHTTCCBCCSSCGGGGTCCCCCCHHHHHHHHHHTCCCEEEESSSCCCTTSSCTTCSEEEECCHHHHHH
T ss_pred             HHHHHCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHH
T ss_conf             78776771553331005892464300378878877404331046871576651628898867899989869899999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             87616334477789753489995211245899907788874203581023210022258996655556899
Q 002610          564 YALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPS  634 (900)
Q Consensus       564 ~AlaG~i~~d~~~~plg~~~~G~~v~l~diwP~~~ei~~~~~~~~~~~~~~~~~~~i~~~~~~w~~l~~~~  634 (900)
                      |||+|+|++|+++||||+|++|++|||+||||+.+||++++.++++|+||.+.|++++.|++.|++|++|+
T Consensus       559 ~AiaG~I~id~~~eplg~~~~G~~V~L~diwPs~~Ei~~~~~~~v~~~~f~~~y~~v~~g~~~W~~l~~p~  629 (629)
T d2b3ya2         559 YAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPS  629 (629)
T ss_dssp             HHHHCBSCCCTTTSCSEEETTTEEECHHHHCCCHHHHHHHHHHHCCHHHHHHHHTTTTTCCHHHHHCCCCC
T ss_pred             HHHCEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCCCCC
T ss_conf             98215455687768776699989773678797879999999854696666899887625781011588999
>d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1l5ja2 c.8.2.1 (A:161-372) Aconitase B, second N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure