Citrus Sinensis ID: 002612


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900
MVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
cccHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccccccccHHcHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHccccHHHHcHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEcccccccccccccccccccccccEEEEccccHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccHHHHHHHHHHccccccccccEEEEEcccccccccHHHHHHHHHcccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccHHHHHHHHHcccHHHcccHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHccHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHcc
MVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMhemddevpTTVAVAYTtnnsqplsrrtrlkgdnqfgvhgladgshsstfdghdedgsleahdetsldglsigwlanstpdEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAqtgttglhfmkgqlrsyqlpkqkrqngislsgtllavspvsalmapMGKAQAAAKELLDSILDSVVRIFENHVVVGELLesrssrhdintpksmiadanwnpdseasvtggySIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLaskapskekrdgsedgltfafrftdatisipnqgADLIrqgwsrrgtnvlqegygtaavlpEQGIYLAASIYRPVLQFTDKVASMlpqkysqlgNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAisspaafrprahtaatyvpsiekgrpVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGrhdidkllrlepasaslpngqldsvssvndaetpgvESELRELFLSLRpirqenlihdENKLILLASLSDSLEYVADSIERLGRAtlresnlveesrkphhnrsssapsrdlASFADEYRKLAIDCLKVLRVEMQLETIFHLQemtsrdyledqdaeepddFIISLTSQItrrdeemapfIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALaaipsidsEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKvnvpgreipsdaLDRVSEILSL
MVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYttnnsqplsrrtrLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVgellesrssrhdintpksmiadanwnpdSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARlaskapskekrdgsedGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAIsspaafrprAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASAslpngqldsvssvNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATlresnlveesrkphhnrsssapsrdlASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALaaipsidseavrRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASllkvnvpgreipsdaldrvseilsl
MVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVeselrelflslrPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
*****IEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAY****************************************************GLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINS****IG****TGTTGLHFMKGQL*************ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELL***************************SVTGGYSIGFSMTVLQSECQQLICEILRAT*******************************LTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRL******************************RELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERL********************************FADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSR*Y**********DFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVP******************
MVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVL******************************************A************************************************DAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKI***************************************************************PMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESR*****************************YSIGFSMTVLQSECQQLICEILRATP************************************************************************VLPEQGIYLAASIYRPVLQFTDKVASM***********GLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVL************IDKLLRLEP***************************LRELFL**RPIRQENLIHDENKLILLASLSDSLEYVADSIER******************************LASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLE*QDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIP*********RLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVN*************VSEILSL
MVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATP****************************DGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSV*************ELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESN*******************DLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
MVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEM***************************************************************DGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSS*********TGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATP**********T*RLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQG*************GTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLD*VSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATL*****************SSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
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MVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query900 2.2.26 [Sep-21-2011]
Q93YU51053 Probable exocyst complex yes no 0.986 0.843 0.735 0.0
Q54P761182 Exocyst complex component yes no 0.463 0.352 0.214 2e-20
Q9VNH6985 Exocyst complex component yes no 0.464 0.424 0.239 6e-20
Q62824975 Exocyst complex component yes no 0.594 0.548 0.220 3e-18
O35382975 Exocyst complex component yes no 0.594 0.548 0.220 7e-18
Q96A65974 Exocyst complex component yes no 0.566 0.523 0.223 1e-17
Q9XWS2893 Exocyst complex component yes no 0.468 0.472 0.235 2e-13
Q9HE881111 Probable exocyst complex N/A no 0.463 0.375 0.220 2e-08
>sp|Q93YU5|EXOC4_ARATH Probable exocyst complex component 4 OS=Arabidopsis thaliana GN=SEC8 PE=1 SV=1 Back     alignment and function desciption
 Score = 1308 bits (3386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/919 (73%), Positives = 778/919 (84%), Gaps = 31/919 (3%)

Query: 2    VPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLED 61
            VP+RIEKLIA KQ+YAA+Q++ QS+LMLEREGLQTVGALQDVRSELTKLRG LF+K+L+D
Sbjct: 144  VPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVGALQDVRSELTKLRGALFFKILDD 203

Query: 62   LHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTR-LKGDNQFGVHGLA 120
            LHAHLYNRGEYSS   S++E DDEVPTT AVA +  +SQPLSRRTR LKGD+QFGV GL 
Sbjct: 204  LHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMSSQPLSRRTRTLKGDSQFGVRGLT 263

Query: 121  DGSH-------SSTFDGHDEDGSLEAHDETSLDGLSIG------------WLANSTPDEF 161
            +GS+       SS+FDGHDE+ S+E HDE++ D    G            WL++STPDEF
Sbjct: 264  NGSYRTASNDESSSFDGHDEEDSVE-HDESTADTARNGTDSKLLSHQLPPWLSDSTPDEF 322

Query: 162  VEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLIN 221
            +EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIICQ+LRPTIHEII SKIKAH +  N
Sbjct: 323  IEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIICQKLRPTIHEIIISKIKAHLETTN 382

Query: 222  SSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKA 281
             S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNGIS SGT LAVSPVS LMAP GKA
Sbjct: 383  LSKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNGISNSGTHLAVSPVSPLMAPGGKA 442

Query: 282  QAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEAS-VT 340
            QAAAKELLDSILD++V+IFENHVV+GELLE ++S+HDINTP+S+  D NWN +SEAS  T
Sbjct: 443  QAAAKELLDSILDTIVKIFENHVVIGELLEMKASQHDINTPRSLPTDVNWNTESEASQAT 502

Query: 341  GGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLT 400
            GGY+I F +TVLQSECQQLICEILRATPEAASADAA QTA+LA KAP K+KRD  EDGLT
Sbjct: 503  GGYTISFPLTVLQSECQQLICEILRATPEAASADAAAQTAKLAKKAPKKDKRDAPEDGLT 562

Query: 401  FAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQF 460
            F FRFTDAT+SI NQGADLIRQGW +R  N   EGYG+AAVLPEQGIYLAASIYRPVLQF
Sbjct: 563  FTFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYGSAAVLPEQGIYLAASIYRPVLQF 622

Query: 461  TDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHT 520
            TDK+ SMLP+K+SQL NDGLL F ENFVKDHLLPTMFVDYRKGVQQAISS AAFRPRAHT
Sbjct: 623  TDKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTMFVDYRKGVQQAISSAAAFRPRAHT 682

Query: 521  AATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTS 580
              TY  ++EKGRP+LQGLLAID LAKEVLGWAQAMPKFA DLVKYVQTFLERT+ERCRTS
Sbjct: 683  T-TYTATVEKGRPILQGLLAIDLLAKEVLGWAQAMPKFATDLVKYVQTFLERTFERCRTS 741

Query: 581  YMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVESELRELFL 640
            YMEAVLEK SYMLIGRHDI+KL+RL+ ASA LP+    +VS    +E  G E EL +LFL
Sbjct: 742  YMEAVLEKLSYMLIGRHDIEKLMRLDAASACLPSTLGHAVSH---SEAVGTEVELSDLFL 798

Query: 641  SLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSS 700
            SLRPI+Q+NLI D+NKLILLASLSDSLEYVADSIERLG+A  R ++  E      ++R+ 
Sbjct: 799  SLRPIKQDNLIRDDNKLILLASLSDSLEYVADSIERLGQAVPRVASQAE-----GNSRNQ 853

Query: 701  SAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIIS 760
            +A  R+LASFADEYRKLA DCLKVLRVEMQLET+FHLQEMT+R+YLED+DAEEPDDF+IS
Sbjct: 854  AASPRNLASFADEYRKLATDCLKVLRVEMQLETVFHLQEMTNREYLEDEDAEEPDDFVIS 913

Query: 761  LTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIA 820
            LTSQITRR+E MAPFI+ EKRNY+FGGI GIAANASIKALADM++INLFGVQQICRN+IA
Sbjct: 914  LTSQITRREEGMAPFISGEKRNYVFGGISGIAANASIKALADMRSINLFGVQQICRNTIA 973

Query: 821  LEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVN 880
            +EQA+AAIP ID E V++ LDRVRTY+ELLNMPFEALLAF+ EH+ +FT TEY++LLKVN
Sbjct: 974  VEQAMAAIPYIDGETVQQNLDRVRTYFELLNMPFEALLAFIAEHDQMFTPTEYSNLLKVN 1033

Query: 881  VPGREIPSDALDRVSEILS 899
            VPGR+ PSDA  R+ EILS
Sbjct: 1034 VPGRDTPSDAQSRLLEILS 1052




Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q54P76|EXOC4_DICDI Exocyst complex component 4 OS=Dictyostelium discoideum GN=exoc4 PE=3 SV=1 Back     alignment and function description
>sp|Q9VNH6|EXOC4_DROME Exocyst complex component 4 OS=Drosophila melanogaster GN=sec8 PE=1 SV=3 Back     alignment and function description
>sp|Q62824|EXOC4_RAT Exocyst complex component 4 OS=Rattus norvegicus GN=Exoc4 PE=1 SV=1 Back     alignment and function description
>sp|O35382|EXOC4_MOUSE Exocyst complex component 4 OS=Mus musculus GN=Exoc4 PE=1 SV=2 Back     alignment and function description
>sp|Q96A65|EXOC4_HUMAN Exocyst complex component 4 OS=Homo sapiens GN=EXOC4 PE=1 SV=1 Back     alignment and function description
>sp|Q9XWS2|EXOC4_CAEEL Exocyst complex component 4 OS=Caenorhabditis elegans GN=sec-8 PE=2 SV=2 Back     alignment and function description
>sp|Q9HE88|SEC8_NEUCR Probable exocyst complex component sec8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sec-8 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query900
225448968 1076 PREDICTED: probable exocyst complex comp 0.996 0.833 0.800 0.0
296085980 1084 unnamed protein product [Vitis vinifera] 0.996 0.827 0.793 0.0
356533947 1066 PREDICTED: probable exocyst complex comp 0.99 0.835 0.788 0.0
356574621 1065 PREDICTED: probable exocyst complex comp 0.988 0.835 0.781 0.0
118481312886 unknown [Populus trichocarpa] 0.945 0.960 0.772 0.0
224113089 1084 predicted protein [Populus trichocarpa] 0.96 0.797 0.729 0.0
449444630 1073 PREDICTED: probable exocyst complex comp 0.994 0.834 0.739 0.0
449490429 1073 PREDICTED: probable exocyst complex comp 0.994 0.834 0.739 0.0
297833818 1053 hypothetical protein ARALYDRAFT_897214 [ 0.986 0.843 0.735 0.0
224097788 1087 predicted protein [Populus trichocarpa] 0.972 0.804 0.715 0.0
>gi|225448968|ref|XP_002269663.1| PREDICTED: probable exocyst complex component 4-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1526 bits (3952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 747/933 (80%), Positives = 825/933 (88%), Gaps = 36/933 (3%)

Query: 2    VPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLED 61
            VPARIEKLIA KQ+YAAVQLHAQS LMLEREGLQTVGALQDVRSELTKLRG++FYK+LED
Sbjct: 144  VPARIEKLIAEKQFYAAVQLHAQSTLMLEREGLQTVGALQDVRSELTKLRGIIFYKILED 203

Query: 62   LHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRL-KGDNQFGVHGLA 120
            LHAHLYN+GEYSSA  S+HE DDEVPTT AVA++ N+SQPLSRRTRL KGDNQFGV GL 
Sbjct: 204  LHAHLYNKGEYSSAASSIHERDDEVPTTTAVAFSMNSSQPLSRRTRLLKGDNQFGVLGLG 263

Query: 121  DGSH------SSTFDGHDEDGSLEAHDETSLDGLSI----------------------GW 152
            DG         S+FDGHDE+G+LE HDE +LDG +                        W
Sbjct: 264  DGYRPGSIDGGSSFDGHDEEGALELHDEATLDGYNAITKVNGGDGSQKDIKIVSHQIPPW 323

Query: 153  LANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSK 212
            L+ +TPDEF+E+++KSDAPLHVKYLQTMVECLC+LGKVAAAGA+ICQRLRPTIHEIITSK
Sbjct: 324  LSYATPDEFLESMKKSDAPLHVKYLQTMVECLCMLGKVAAAGAMICQRLRPTIHEIITSK 383

Query: 213  IKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVS 272
            IKAHA+L+NS+RS I +AA T TTGLH++KGQL SYQ PKQKRQNGISL+GTLLAVSPVS
Sbjct: 384  IKAHAELVNSTRSGICRAAHTATTGLHYLKGQLESYQSPKQKRQNGISLAGTLLAVSPVS 443

Query: 273  ALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWN 332
             +MAP G AQ AAKELLDSILD VVRIFENHVVVGELLES+ ++ D+NTPKS+  + NWN
Sbjct: 444  PVMAPAGTAQTAAKELLDSILDIVVRIFENHVVVGELLESKGTQVDMNTPKSVTVEVNWN 503

Query: 333  PDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEK 391
             DSEAS VTGGYSIGFS+TVLQSECQQLICEILRATPEAASADA VQTARLASKAPSKEK
Sbjct: 504  HDSEASQVTGGYSIGFSLTVLQSECQQLICEILRATPEAASADATVQTARLASKAPSKEK 563

Query: 392  RDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAA 451
            RD SEDGLTFAFRFTDATIS+PNQG DLIRQGW+RRG NVLQEGYG+AA+LPEQGIYLAA
Sbjct: 564  RDRSEDGLTFAFRFTDATISVPNQGVDLIRQGWTRRGPNVLQEGYGSAAILPEQGIYLAA 623

Query: 452  SIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSP 511
            SIYRPV+QFTDK+ASMLP+KYSQLGNDGLLAFVENFVKDH LPTMFVDYRKGVQQAISSP
Sbjct: 624  SIYRPVIQFTDKIASMLPKKYSQLGNDGLLAFVENFVKDHFLPTMFVDYRKGVQQAISSP 683

Query: 512  AAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLE 571
            AAFRPR+H A+TY P +EKGRPVLQGLLAIDFLAKEVLGWAQAMPKFA DLVKYVQTFLE
Sbjct: 684  AAFRPRSHAASTYSPLVEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAGDLVKYVQTFLE 743

Query: 572  RTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPN--GQLDSVSSVNDAETP 629
            RTYERCRTSYMEAVLEKQSYMLIGRHDI+KL+R +PASA LPN  GQ +  S+ +D +  
Sbjct: 744  RTYERCRTSYMEAVLEKQSYMLIGRHDIEKLMRCDPASACLPNPFGQPNMESNASDVDVE 803

Query: 630  GVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVE 689
             VE EL +L LSLRPI+QENLI D+NKLILLASLSDSLEYVADSIERLG+A++R SN VE
Sbjct: 804  -VEMELCDLLLSLRPIKQENLIRDDNKLILLASLSDSLEYVADSIERLGKASIRASNPVE 862

Query: 690  ESRKP---HHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYL 746
            E+ K    HH ++SSAP R+LASFADEYRKLAIDCLKVLRVEMQLETIFH+QEMTSR+YL
Sbjct: 863  ENGKQKMHHHTQTSSAPPRNLASFADEYRKLAIDCLKVLRVEMQLETIFHMQEMTSREYL 922

Query: 747  EDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNI 806
            +DQDAEEPDDFIISLT+QITRRDEEMAPF+A  KRNYIFGGIC IAANAS+KALADMK+I
Sbjct: 923  DDQDAEEPDDFIISLTAQITRRDEEMAPFVAGVKRNYIFGGICSIAANASMKALADMKSI 982

Query: 807  NLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHEN 866
            NLFGVQQICRNSIALEQALAAIPSIDSE V++RLD +RTYYELLNMPFEALLAF+TEHEN
Sbjct: 983  NLFGVQQICRNSIALEQALAAIPSIDSETVQQRLDHIRTYYELLNMPFEALLAFITEHEN 1042

Query: 867  LFTTTEYASLLKVNVPGREIPSDALDRVSEILS 899
            LFT TEY +LLKV VPGREIP+DA +RVSEILS
Sbjct: 1043 LFTATEYTNLLKVQVPGREIPADARERVSEILS 1075




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085980|emb|CBI31421.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356533947|ref|XP_003535519.1| PREDICTED: probable exocyst complex component 4-like [Glycine max] Back     alignment and taxonomy information
>gi|356574621|ref|XP_003555444.1| PREDICTED: probable exocyst complex component 4-like [Glycine max] Back     alignment and taxonomy information
>gi|118481312|gb|ABK92599.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113089|ref|XP_002316388.1| predicted protein [Populus trichocarpa] gi|222865428|gb|EEF02559.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449444630|ref|XP_004140077.1| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449490429|ref|XP_004158603.1| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297833818|ref|XP_002884791.1| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata] gi|297330631|gb|EFH61050.1| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224097788|ref|XP_002311074.1| predicted protein [Populus trichocarpa] gi|222850894|gb|EEE88441.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query900
TAIR|locus:20762491053 SEC8 "subunit of exocyst compl 0.986 0.843 0.725 0.0
DICTYBASE|DDB_G02848331182 exoc4 "exocyst complex subunit 0.173 0.131 0.273 8.7e-24
UNIPROTKB|B7Z321873 EXOC4 "cDNA FLJ53330, highly s 0.553 0.570 0.221 1.6e-22
UNIPROTKB|Q96A65974 EXOC4 "Exocyst complex compone 0.553 0.511 0.221 2.2e-22
RGD|621791975 Exoc4 "exocyst complex compone 0.576 0.532 0.217 2.5e-22
UNIPROTKB|Q62824975 Exoc4 "Exocyst complex compone 0.576 0.532 0.217 2.5e-22
UNIPROTKB|F1PMM8975 EXOC4 "Uncharacterized protein 0.553 0.510 0.219 2e-21
ZFIN|ZDB-GENE-041210-112968 exoc4 "exocyst complex compone 0.482 0.448 0.241 4e-21
MGI|MGI:1096376975 Exoc4 "exocyst complex compone 0.576 0.532 0.210 4.4e-21
UNIPROTKB|E1BUN2976 EXOC4 "Uncharacterized protein 0.535 0.493 0.217 1.1e-19
TAIR|locus:2076249 SEC8 "subunit of exocyst complex 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3319 (1173.4 bits), Expect = 0., P = 0.
 Identities = 667/919 (72%), Positives = 768/919 (83%)

Query:     2 VPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLED 61
             VP+RIEKLIA KQ+YAA+Q++ QS+LMLEREGLQTVGALQDVRSELTKLRG LF+K+L+D
Sbjct:   144 VPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVGALQDVRSELTKLRGALFFKILDD 203

Query:    62 LHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTR-LKGDNQFGVHGLA 120
             LHAHLYNRGEYSS   S++E DDEVPTT AVA +  +SQPLSRRTR LKGD+QFGV GL 
Sbjct:   204 LHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMSSQPLSRRTRTLKGDSQFGVRGLT 263

Query:   121 DGSH-------SSTFDGHDEDGSLEAHDETSLDGLSIG------------WLANSTPDEF 161
             +GS+       SS+FDGHDE+ S+E HDE++ D    G            WL++STPDEF
Sbjct:   264 NGSYRTASNDESSSFDGHDEEDSVE-HDESTADTARNGTDSKLLSHQLPPWLSDSTPDEF 322

Query:   162 VEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLIN 221
             +EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIICQ+LRPTIHEII SKIKAH +  N
Sbjct:   323 IEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIICQKLRPTIHEIIISKIKAHLETTN 382

Query:   222 SSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKA 281
              S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNGIS SGT LAVSPVS LMAP GKA
Sbjct:   383 LSKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNGISNSGTHLAVSPVSPLMAPGGKA 442

Query:   282 QAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEAS-VT 340
             QAAAKELLDSILD++V+IFENHVV+GELLE ++S+HDINTP+S+  D NWN +SEAS  T
Sbjct:   443 QAAAKELLDSILDTIVKIFENHVVIGELLEMKASQHDINTPRSLPTDVNWNTESEASQAT 502

Query:   341 GGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLT 400
             GGY+I F +TVLQSECQQLICEILRATPEAASADAA QTA+LA KAP K+KRD  EDGLT
Sbjct:   503 GGYTISFPLTVLQSECQQLICEILRATPEAASADAAAQTAKLAKKAPKKDKRDAPEDGLT 562

Query:   401 FAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQF 460
             F FRFTDAT+SI NQGADLIRQGW +R  N   EGYG+AAVLPEQGIYLAASIYRPVLQF
Sbjct:   563 FTFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYGSAAVLPEQGIYLAASIYRPVLQF 622

Query:   461 TDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHT 520
             TDK+ SMLP+K+SQL NDGLL F ENFVKDHLLPTMFVDYRKGVQQAISS AAFRPRAHT
Sbjct:   623 TDKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTMFVDYRKGVQQAISSAAAFRPRAHT 682

Query:   521 AATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTS 580
               TY  ++EKGRP+LQGLLAID LAKEVLGWAQAMPKFA DLVKYVQTFLERT+ERCRTS
Sbjct:   683 T-TYTATVEKGRPILQGLLAIDLLAKEVLGWAQAMPKFATDLVKYVQTFLERTFERCRTS 741

Query:   581 YMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVXXXXXXXXX 640
             YMEAVLEK SYMLIGRHDI+KL+RL+ ASA LP+    +VS    +E  G          
Sbjct:   742 YMEAVLEKLSYMLIGRHDIEKLMRLDAASACLPSTLGHAVSH---SEAVGTEVELSDLFL 798

Query:   641 XXXPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSS 700
                PI+Q+NLI D+NKLILLASLSDSLEYVADSIERLG+A  R ++  E +     +R+ 
Sbjct:   799 SLRPIKQDNLIRDDNKLILLASLSDSLEYVADSIERLGQAVPRVASQAEGN-----SRNQ 853

Query:   701 SAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIIS 760
             +A  R+LASFADEYRKLA DCLKVLRVEMQLET+FHLQEMT+R+YLED+DAEEPDDF+IS
Sbjct:   854 AASPRNLASFADEYRKLATDCLKVLRVEMQLETVFHLQEMTNREYLEDEDAEEPDDFVIS 913

Query:   761 LTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIA 820
             LTSQITRR+E MAPFI+ EKRNY+FGGI GIAANASIKALADM++INLFGVQQICRN+IA
Sbjct:   914 LTSQITRREEGMAPFISGEKRNYVFGGISGIAANASIKALADMRSINLFGVQQICRNTIA 973

Query:   821 LEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVN 880
             +EQA+AAIP ID E V++ LDRVRTY+ELLNMPFEALLAF+ EH+ +FT TEY++LLKVN
Sbjct:   974 VEQAMAAIPYIDGETVQQNLDRVRTYFELLNMPFEALLAFIAEHDQMFTPTEYSNLLKVN 1033

Query:   881 VPGREIPSDALDRVSEILS 899
             VPGR+ PSDA  R+ EILS
Sbjct:  1034 VPGRDTPSDAQSRLLEILS 1052




GO:0000145 "exocyst" evidence=IEA;IDA
GO:0005634 "nucleus" evidence=ISM
GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA
GO:0015031 "protein transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0009846 "pollen germination" evidence=IGI
GO:0009860 "pollen tube growth" evidence=IGI
GO:0005829 "cytosol" evidence=IDA
GO:0048354 "mucilage biosynthetic process involved in seed coat development" evidence=IMP
GO:0009506 "plasmodesma" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
DICTYBASE|DDB_G0284833 exoc4 "exocyst complex subunit 4" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z321 EXOC4 "cDNA FLJ53330, highly similar to Exocyst complex component 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q96A65 EXOC4 "Exocyst complex component 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|621791 Exoc4 "exocyst complex component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q62824 Exoc4 "Exocyst complex component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PMM8 EXOC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041210-112 exoc4 "exocyst complex component 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1096376 Exoc4 "exocyst complex component 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BUN2 EXOC4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93YU5EXOC4_ARATHNo assigned EC number0.73550.98660.8433yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pm.C_LG_X0909
hypothetical protein (1085 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 900
KOG3691982 consensus Exocyst complex subunit Sec8 [Intracellu 100.0
PF10474234 DUF2451: Protein of unknown function C-terminus (D 98.48
PF04437494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 97.89
PF04091311 Sec15: Exocyst complex subunit Sec15-like ; InterP 95.0
PF06046566 Sec6: Exocyst complex component Sec6; InterPro: IP 86.68
>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=100.00  E-value=1.3e-107  Score=932.15  Aligned_cols=778  Identities=20%  Similarity=0.259  Sum_probs=572.9

Q ss_pred             chhHHHHHHhcccHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHhHhHHHHHHHHHHHHhhhcCCCccchhhcccc
Q 002612            2 VPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHE   81 (900)
Q Consensus         2 vP~klE~~iseK~yl~A~~lL~~sl~~l~~~~L~~I~AL~dlR~~L~~qe~~L~d~LIEELh~hlYlKs~~~~~~~~~~~   81 (900)
                      ||+|||++|++|+|+||+++|++|+.++|++ |.+|++|+|||++|+.+++.|+|+|+||||+|+|+|+.- ..-.+..+
T Consensus       145 vPqkie~~i~keqY~~Asdll~~~~~~lng~-L~~VEgLs~l~~ele~~~~~L~~~L~eELv~ily~ks~~-~~l~~~~~  222 (982)
T KOG3691|consen  145 VPQKIETLIAKEQYLQASDLLTRAWELLNGP-LDGVEGLSDLRSELEGLLSHLEDILIEELVSILYLKSVA-YPLVSYCR  222 (982)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhh-hhHHhhhc
Confidence            8999999999999999999999999999997 999999999999999999999999999999999999741 10000001


Q ss_pred             cCCCCCcccccccccCCCCCccccccccCCCCCccccccCCCCCcCCCCCCCCCCccccccccccccc-cccccCCC-ch
Q 002612           82 MDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLS-IGWLANST-PD  159 (900)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~e~~~~~~~~~~~~d~~~~~~~~~~~~s~~~~~~l-~~~l~~~~-~~  159 (900)
                                       .+|++.+  +       ++++|++   ++.++        .+++.....++ ..-..... ..
T Consensus       223 -----------------~~~~~s~--l-------~~~~~~~---in~t~--------l~~sr~~~ea~~~k~~~g~~sv~  265 (982)
T KOG3691|consen  223 -----------------TNPLSSR--L-------NDFLYNN---INTTT--------LGTSRQLLEALCHKSDAGSGSVR  265 (982)
T ss_pred             -----------------CCchhhH--H-------HHHhhcc---cCccc--------cCccHHHHHHHHHHhhcCCcchh
Confidence                             0111111  0       1233332   11111        00110000000 00000000 00


Q ss_pred             -----hHHHhhhcC-CCcchHHHHHHHHHHHHhhCChHHHHHHHHhhhhHHHHHHHHHhHHHhHhhhhcccccccccccc
Q 002612          160 -----EFVEAIRKS-DAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQT  233 (900)
Q Consensus       160 -----~~~e~~~~n-~e~~sf~yi~~LlesL~~LgkL~~Al~~i~qRl~~EL~~iV~~t~~e~~e~v~~~~~~~~~~~~~  233 (900)
                           ...++..-. ||+.+-.++.++++.++++.|+|.++++|..|+.+|+++||.+++..    +..++++.+.++  
T Consensus       266 ~~~~~~~~~~l~~~~pe~~sslf~~il~k~~~~~~k~p~~~n~i~~~~~~el~niv~kSt~~----i~~~g~~~~e~a--  339 (982)
T KOG3691|consen  266 DIRIVLEKEDLLLSLPEANSSLFRRILEKFTTVDSKSPAIVNKISERINVELVNIVSKSTYD----ISLSGETDREHA--  339 (982)
T ss_pred             hHHHHHhhccccccchhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhhccchh----hhccccchhhhh--
Confidence                 012233333 67777788889999999999999999999999999999999998888    655555333210  


Q ss_pred             CccccccccccccccccccccccCCccccccccccCcccccccccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 002612          234 GTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESR  313 (900)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~lf~kf~av~~~Hrvv~e~~~~~  313 (900)
                                           +.+     +                 --.+|++|||.||.||+++++.|+++++-... 
T Consensus       340 ---------------------t~~-----t-----------------n~f~L~ell~~if~kf~a~aq~Ha~~~~~s~~-  375 (982)
T KOG3691|consen  340 ---------------------TFD-----T-----------------NHFMLLELLEEIFTKFEAAAQKHASSLHKSLQ-  375 (982)
T ss_pred             ---------------------hcc-----C-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence                                 000     0                 00268999999999999999999999873331 


Q ss_pred             hccccCCCCccccccCCCCCCCCccccCCCchhhhHHHHHHHHHHHHHHHhhcCCcccch-hhHHHH----------hhh
Q 002612          314 SSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASA-DAAVQT----------ARL  382 (900)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~vW~~iq~Ei~~LL~~YL~~~~~~~~~-~~~~~~----------~~~  382 (900)
                       .  |.-+           |..  +-...|+|.++|.++|+||+.||.+||+..+..... .++...          ..|
T Consensus       376 -~--~vv~-----------P~~--sq~d~f~~~~~W~k~qs~ielllsE~i~~nn~~~~~~e~s~~~sp~s~~r~~~~~f  439 (982)
T KOG3691|consen  376 -N--DVVS-----------PKV--SQKDTFDFTDFWQKAQSEIELLLSEYIDNNNNSVKGTEMSINNSPASNERKKLFDF  439 (982)
T ss_pred             -c--cccC-----------Ccc--cCCCcccHHHHHHHHHHHHHHHHHHHhccCCCccccccccccCCCCCcchhHHHHh
Confidence             1  1111           111  112359999999999999999999999877543221 222111          122


Q ss_pred             hcCCCCCcccCCCCCccccceeccCcccccCcccchhhhcccccCCCcccccCCcccccccCCCcchhHHhhHHHHHHHH
Q 002612          383 ASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTD  462 (900)
Q Consensus       383 ~~~~~~~~k~~~~~~~~~~lF~~~~~~~s~~~~~~~~l~~g~~~s~~~~~~e~~~~~~~Lv~psvFNm~~il~P~L~Fi~  462 (900)
                      +...+..++.      +.|-|+++..+.....++..........++--.+.++++..+.+|+||+|||++||+|++.|++
T Consensus       440 ~~e~~~~~~s------~~f~~~~~~~a~~k~~~l~~qrs~~~~~~~el~~g~s~e~~e~ic~Psvfni~vI~~pll~fie  513 (982)
T KOG3691|consen  440 TNEIAVEPNS------NLFYHRINELANEKAPELILQRSNASVSTIELFSGSSKEIVELICKPSVFNIKVILPPLLRFIE  513 (982)
T ss_pred             hccccCCCCc------ccchhHHHHHhhhccchhhhhhhhhhhccchhccCcchhhhcccCCcccceeeehhhHHHHHHH
Confidence            2222222221      2333444444333222211111111101110023344455578999999999999999999999


Q ss_pred             HHHhhcCCCCcccCccchHHHHHHHHHhhccccHHHHHHHHHHHHhcCCCcccccccccccccccccCCCcccchHHHHH
Q 002612          463 KVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAID  542 (900)
Q Consensus       463 ~~~~ilp~~~s~~~~~~l~~FlddFv~~vFLPql~~~l~~~~~~~v~~~daf~~~~~~~~~~~~~~~~~rPI~ksa~~~~  542 (900)
                      .++.++|.+  .+.+|.++.|||+||+++||||+..++...|+.++++.|||+...+|+.+.  ..+-.+|++++++.+.
T Consensus       514 ~te~~l~~~--p~q~c~l~~Fm~~yi~~sFl~qv~~~m~~~ie~~~k~~~a~~l~~s~~~i~--i~k~~~~l~q~~~~ve  589 (982)
T KOG3691|consen  514 ETESILKNP--PIQPCSLRNFMDEYIKGSFLPQVYKEMSSHIEGIMKDVDAFRLHRSWKIIP--IFKCHLPLLQSFHIVE  589 (982)
T ss_pred             HHHHHcCCC--CCCCchHHHHHHHHHHHHhHHHHHHHHHHHhHhhcccCcceeeecCHhhhh--HHHHhHHHHHHHHHHH
Confidence            999999876  466899999999999999999999999999999999999999999996421  2244567777777776


Q ss_pred             HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hhhhhhhcccchHhHHHhcCccccCCCC-C
Q 002612          543 FLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVL------EKQSYMLIGRHDIDKLLRLEPASASLPN-G  615 (900)
Q Consensus       543 ~l~~~l~~ml~t~p~y~~~~~~li~~~L~~y~~~c~~~y~~lv~------~~~s~~w~~~~di~~lm~~~~~~~~~~~-~  615 (900)
                      .-+.++...+++++.|.+-|+.++|..+..|++-|.+.|++.+.      ++++++|++|+||+++++..|+|..... +
T Consensus       590 ~~L~~v~n~~~~l~~~~~~~l~m~~~~~~~Y~~~c~~a~~g~~~~~~~~~~~is~aWl~Dddisr~l~klpNw~~~s~~~  669 (982)
T KOG3691|consen  590 DYLPIVANLAVDLYELSDYLLNMVCNHLSDYLDICRAALRGIVQHVSEVKRKISVAWLKDDDISRQLKKLPNWKNPSLEG  669 (982)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhhhhHHHhccchhHHHHHhccCCccccccc
Confidence            67778888999999999999999999999999999999999987      4689999999999999999999986422 1


Q ss_pred             CCCC--CCC-----CCCCCchhhHHHHHHHHhc-CCCCCccccccChhHHHHHHHHHHhHHHHHHHHHHhhhhhccCCcc
Q 002612          616 QLDS--VSS-----VNDAETPGVESELRELFLS-LRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNL  687 (900)
Q Consensus       616 ~~~~--~~~-----~~~~~~~e~E~~l~~~~~~-~~~l~~~dli~d~~~l~~La~L~~Sl~Wl~~~l~~L~~~~~~~~~~  687 (900)
                      +...  .+.     ..+....|.|+.+.++.+. +..++..||++|...++++|.+++|++|+++++........... .
T Consensus       670 ~~~~~r~E~e~~lq~~~r~~kE~e~li~nLgt~~q~~~s~~~il~~m~~lK~~a~m~ES~~w~a~r~rs~~~~l~~~~-l  748 (982)
T KOG3691|consen  670 QNELCREEEESFLQAGDRNIKESELLISNLGTDSQLSISVSDILNDMSDLKQLANMHESLEWFADRARSGFDFLPIDN-L  748 (982)
T ss_pred             ccchhhhhcchHhHhhhcccchHhhhhcccchhhhcccCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhccccchhh-h
Confidence            2111  000     1112234666666555433 56899999999999999999999999999999765554432110 0


Q ss_pred             cccCCCCCCCC------C-CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccccC-CCc--cCCCCCCCCChH
Q 002612          688 VEESRKPHHNR------S-SSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTS-RDY--LEDQDAEEPDDF  757 (900)
Q Consensus       688 ~~~~~~~~~~r------~-s~~~~~~f~~i~~~f~~La~~~Ll~LrlEvR~~~iy~L~~l~~-~~y--~~~~~~~epD~~  757 (900)
                      ..+.+......      - ..-....|+.++++|++||++||+.||+|||+||||||+++.. ++|  +-..+++||||.
T Consensus       749 l~~n~~~~~~~~~dl~~l~dd~~~s~~ee~~~~fq~la~~cLLlLhlEVRv~Cfh~l~~~s~~~n~~i~~~~~s~e~D~~  828 (982)
T KOG3691|consen  749 LGNNPALMKGYLTDLIELYDDFYKSAYEELADSFQRLAFDCLLLLHLEVRVQCFHYLNPLSKLRNTSIVNRDVSGEPDPS  828 (982)
T ss_pred             hcCCccccccccccchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhccCCceeecccccCCCCHH
Confidence            00001000000      0 1123457999999999999999999999999999999996533 443  333349999999


Q ss_pred             HHHHhhHHHHHHhhhccccchhhhhhhhccHHHHHHHHHHHhchhhhhhcHhhHHHHhhhHHHHHHHhhcCCCCChHHHH
Q 002612          758 IISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVR  837 (900)
Q Consensus       758 I~~Ln~dL~~~de~ls~~L~~~k~~fIF~GL~~li~~~lI~~~~~i~~iN~~Gvkkm~rNI~aLQQ~L~nI~~~~e~~v~  837 (900)
                      |+.||++|.++|++|+++|+|+|++|||+|||+|++.+||+++++|++||++|||||||||+||||+|+||++.|+    
T Consensus       829 V~aL~k~l~~~e~klk~~L~e~k~~yIFeGL~hL~s~~LI~~a~~i~~ln~~~ikkMcRNv~~lQQ~Lsnit~~re----  904 (982)
T KOG3691|consen  829 VVALNKDLSTTEEKLKACLNEWKRRYIFEGLGHLVSSILISGAQYIERLNEGGIKKMCRNVSALQQILSNITESRE----  904 (982)
T ss_pred             HHHHHHHHHHHHHHHHhhcCHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcccccc----
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999996    


Q ss_pred             hhhHHHHHHHHHcCCCHHHHHHHHHhcCCCCCHHHHHHhhhhccCC-CCC-----chhHHHhHHhhhc
Q 002612          838 RRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPG-REI-----PSDALDRVSEILS  899 (900)
Q Consensus       838 ~~l~ra~~yyeL~~~~~~~ll~~i~e~~~~Fs~~Ey~~ll~L~~~~-~~~-----~~~~~~r~~~i~~  899 (900)
                      +||++||+||+||+.+|++|++.+.+++.+||+.||+++++|.|++ .|+     ..+++||+++|+|
T Consensus       905 vdld~ar~fy~ll~nt~deile~v~d~~~qfse~e~~qllrls~rS~~g~~k~~~~~e~~qkl~n~i~  972 (982)
T KOG3691|consen  905 VDLDKARRFYELLQNTADEILEHVIDARKQFSEPELKQLLRLSYRSLKGDAKRNGRDELLQKLSNIIG  972 (982)
T ss_pred             cccHHHHHHHHHHhcCHHHHHHHHHhccccccHHHHHHHHHHHHHhhccccCCCchHHHHHHHHHHHh
Confidence            6999999999999999999999999999999999999999999985 443     5889999999873



>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query900
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-12
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 81.8 bits (201), Expect = 7e-16
 Identities = 102/657 (15%), Positives = 193/657 (29%), Gaps = 204/657 (31%)

Query: 157 TPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAH 216
           + +E    I   DA      L      L    +       + + LR   ++ + S IK  
Sbjct: 47  SKEEIDHIIMSKDAVSGTLRL---FWTLLSKQEEMVQ-KFVEEVLRIN-YKFLMSPIKTE 101

Query: 217 A-QLINSSRSAIGQAAQTGTTGLHFMKG---------QLRSYQLPKQKRQNGISLSGTLL 266
             Q    +R  I Q  +       F K          +LR   L + +    + + G   
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ-ALLELRPAKNVLIDG--- 157

Query: 267 AVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVV---VGELLESRSSRHDINTPK 323
                   +   GK   A    L      V    +  +    +             N+P+
Sbjct: 158 --------VLGSGKTWVALDVCLS---YKVQCKMDFKIFWLNLKN----------CNSPE 196

Query: 324 SMIA---------DANWNPDSEASVTGGYSIGFSMTVLQSECQQLICE--------ILR- 365
           +++          D NW   S+ S     +I   +  +Q+E ++L+          +L  
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHS----SNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 366 -ATPEAASA------------DAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISI 412
               +A +A               V T  L++   +    D     LT            
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQV-TDFLSAATTTHISLDHHSMTLT------------ 299

Query: 413 PNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQ---GIYLAASIYRPVLQFTDKVASMLP 469
           P++   L+           L         LP +         SI          +A  + 
Sbjct: 300 PDEVKSLLL--------KYLDCRPQD---LPREVLTTNPRRLSI----------IAESIR 338

Query: 470 ------QKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQ-AISSPAAFRPRAHTAA 522
                   +  +  D L   +E+ + + L P    +YRK   + ++     F P AH   
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSL-NVLEPA---EYRKMFDRLSV-----FPPSAH--- 386

Query: 523 TYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMP----KFAADLVKYVQTFLERTYERCR 578
             +P+      +L            ++ W   +          L KY  + +E+  +   
Sbjct: 387 --IPT-----ILL-----------SLI-WFDVIKSDVMVVVNKLHKY--SLVEKQPKEST 425

Query: 579 TSYM------------EAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDS------- 619
            S              E  L +    ++  ++I K    +      P   LD        
Sbjct: 426 ISIPSIYLELKVKLENEYALHRS---IVDHYNIPK--TFDSDDLIPP--YLDQYFYSHIG 478

Query: 620 --VSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSL-------EYV 670
             + ++   E     +  R +FL  R + Q+ + HD        S+ ++L        Y+
Sbjct: 479 HHLKNIEHPER---MTLFRMVFLDFRFLEQK-IRHDSTAWNASGSILNTLQQLKFYKPYI 534

Query: 671 ADSIERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFA--DEYRKLAIDCLKVL 725
            D+  +  R     + +++   K   N   S    DL   A   E   +  +  K +
Sbjct: 535 CDNDPKYER---LVNAILDFLPKIEENLICS-KYTDLLRIALMAEDEAIFEEAHKQV 587


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query900
d2d2sa1229 Exocyst complex component EXO84 {Baker's yeast (Sa 89.41
>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.41  E-value=0.42  Score=21.79  Aligned_cols=64  Identities=14%  Similarity=0.079  Sum_probs=45.0

Q ss_pred             CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             96058999882000999999999999975356----98876660789999998595899999999987
Q 002612            1 MVPARIEKLIAGKQYYAAVQLHAQSALMLERE----GLQTVGALQDVRSELTKLRGVLFYKVLEDLHA   64 (900)
Q Consensus         1 ~vP~klE~~iseK~~l~A~~lL~~sl~~l~~~----~L~~IgAL~dlR~~L~~qe~~L~d~LIEELh~   64 (900)
                      +.||.|+..|++.+|=+|++++..+=..+++-    ...++-.+..++..+.+.+..|.+.|...|..
T Consensus        14 d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l~~   81 (229)
T d2d2sa1          14 EGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS   81 (229)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             66188899999860999999999999999736345675327899999999999999999999999852