Citrus Sinensis ID: 002625

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------90

MAMDPSSTSSLQLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRRKLPQKSDTHFEEEEGEEEDGDTEEGDFEEDFGSDGDAIMRQQSQSRLSRSLEDSTLRRYGISSSLPNVSVRNDWLEEDAKFDEAIRVRAQNCSASSLDKLNFIPTGLPSLQTPRRLEEGQSINRSGSGARLVSLGRLPRTPVGNAFEDSDEDGTEHANEDDITYSNENVDAFAYMISDADSKVQSSSALPFRGDGMNYVQDKNYRATINDAKPALDLHDNGKVDKASRNAVGTETILYNTISQLRTTVHEPTNIEEEEVWKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEIDT

cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEEccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccEEcEEccccccccccccHHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccHHHHHHHHHHHHccccccccEEEEEcHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHccccccEEcccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHccccEEEccccccccccccccccHHHHHHccccEEEccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccc

ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHcccccccccEEEEcccccccccccccccccccEEcccccEEEEcccccccccccccEEEEcccccccccHcccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccHcHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEcccEEEEEccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccEEEHHHHHHHccccccEcccccEEEcccccccccccccccccccccHHHHHHHEEcccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHccccccccEEEEEccHHHHHHHHccccccHHHHHHHHHHHHHHEcccccccccHHHHHHHEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHcccHHHHHcHcHHHHHHHHHHHHcccccccccccEEEEcccccHHHHHHcccEEEEccccccEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHcccccccccccccccEccccccHEHHHHHHHHHHHHHHHHHcccccccHccc

mamdpsstSSLQLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRRklpqksdthfeeeegeeedgdteegdfeedfgsdgdaIMRQQSQSRLsrsledstlrrygissslpnvsvrndwleedaKFDEAIRVRAqncsassldklnfiptglpslqtprrleegqsinrsgsgarlvslgrlprtpvgnafedsdedgtehanedditysnenVDAFAYMISdadskvqsssalpfrgdgmnyvqdknyratindakpaldlhdngkvdkasrnavgTETILYNTISQLRttvheptnieEEEVWKMIQECLDLRKRYVFtekvapwmkeaepetnisemrsdpfhfvpveaskhhfrmedGVVHVyasesdttelfpvasatefftdMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNadgeflaqksaphrdfynirkvdthvhhsacMNQKHLLRFIKSKlrkepdevvifrdgkYMTLKEVFESldltgydlnvdlldvhadkstfhrfdkfnlkynpcgqsrLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVfiplfevtidpsshpqLHVFLLMVVGFdlvddeskperrptkhmpkpaewtnefnpaysyYTYYFYANLYTLNklreskgmptiklrphcgeageIDHLAAAFLLCNnishgihlrkspvLQYLYYLAQIGLamsplsnnslfldyhrnpfpmffqrglnvslssddplqiHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQsgfshmakshwlgnkyfirgpggndihktnvpniriEFRHETWKEEMQYVYLGRAiipveidt

mamdpsstSSLQLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRrklpqksdthfeeeegeeedgdteegdFEEDFGSDGDAIMRQQsqsrlsrsledstlrrygissslpnvsvrnDWLEEDAKFDEAIRVRAQncsassldklnfipTGLPSLQTPRRLEegqsinrsgsgarlvslgrlprtpvgnafedsdedgtehanedditYSNENVDAFAYMISDADSKVQSSSALPFRGDGMNYVQDKNYRATINDAkpaldlhdngkvdkasrnavgTETIlyntisqlrttvheptnieeeevWKMIQECLDLRKRYVFTekvapwmkeaepetnisemrsdPFHFVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKsklrkepdevvifrdgkymtLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKperrptkhmpkpaewtnefNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEIDT

MAMDPSSTSSLQLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRRKLPQKSDTHfeeeegeeedgdteegdfeedfgsdgdAIMrqqsqsrlsrslEDSTLRRYGISSSLPNVSVRNDWLEEDAKFDEAIRVRAQNCSASSLDKLNFIPTGLPSLQTPRRLEEGQSINRSGSGARLVSLGRLPRTPVGNAFEDSDEDGTEHANEDDITYSNENVDAFAYMISDADSKVQSSSALPFRGDGMNYVQDKNYRATINDAKPALDLHDNGKVDKASRNAVGTETILYNTISQLRTTVHEPTNIEEEEVWKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPaysyytyyfyanlytlnKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEIDT

*************AMAALVGASLMAISAFYIHKRAVDQVLDRLVEIR*********************************************************************SVRNDWLEEDAKFDEAIRVRAQNCS***LDKLNFI****************************************************************NVDAFAYMI********************NYVQDKNYRATI********************NAVGTETILYNTISQLRTTVHEPTNIEEEEVWKMIQECLDLRKRYVFTEKVAPWMK***************FHFVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLV*******************WTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVE***

***********QLAMAALVGASLMAISAFYIHKRAVDQVLD***************************************************************************************************************************************************************************************************************************************************************HEPTNIEEEEVWKMIQECLDLRKRYVFTE*********************PFHFVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNA**********PHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAI*******

**********LQLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRRKLPQ************************EDFGSDGDAIMR*************STLRRYGISSSLPNVSVRNDWLEEDAKFDEAIRVRAQNCSASSLDKLNFIPTGLPSLQTPRRLEEGQSINRSGSGARLVSLGRLPRTPVGNAF************EDDITYSNENVDAFAYMISDADSKVQSSSALPFRGDGMNYVQDKNYRATINDAKPALDLHDNGKVDKASRNAVGTETILYNTISQLRTTVHEPTNIEEEEVWKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVD**************KPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEIDT

********SSLQLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRRK*****************************F*SDGDAIMRQ*S**********STLRRYGISSSLPNVSVRNDWLEEDAKFDEAIRVRAQNCSASSLDKLNFIPTGLPSLQTP***********************************************D*TYSNENVDAFAYMISDADSKVQSSSALPFRGDG********************************RNAVGTETILYNTISQLRTTVHEPTNIEEEEVWKMIQECLDLRKRYVFTEKVAPWMKE*EPETNISEMRSDPFHFVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDE*KPERRPTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRA********

iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		899	2.2.26 [Sep-21-2011]
O80452		839	AMP deaminase OS=Arabidop	yes	no	0.912	0.977	0.599	0.0
Q84NP7		815	Probable AMP deaminase OS	yes	no	0.787	0.868	0.644	0.0
Q54DD0		790	AMP deaminase OS=Dictyost	yes	no	0.649	0.739	0.580	0.0
Q9DBT5		798	AMP deaminase 2 OS=Mus mu	yes	no	0.586	0.660	0.573	0.0
Q02356		824	AMP deaminase 2 OS=Rattus	yes	no	0.586	0.639	0.573	0.0
Q01433		879	AMP deaminase 2 OS=Homo s	yes	no	0.586	0.599	0.571	0.0
P50998		831	AMP deaminase OS=Schizosa	yes	no	0.634	0.685	0.524	0.0
P15274		810	AMP deaminase OS=Saccharo	yes	no	0.596	0.661	0.573	1e-178
O09178		765	AMP deaminase 3 OS=Rattus	no	no	0.580	0.682	0.547	1e-170
O08739		766	AMP deaminase 3 OS=Mus mu	no	no	0.580	0.681	0.547	1e-169

>sp\|O80452\|AMPD_ARATH AMP deaminase OS=Arabidopsis thaliana GN=AMPD PE=1 SV=2	Back alignment and function desciption

 Score = 1058 bits (2736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/897 (59%), Positives = 650/897 (72%), Gaps = 77/897 (8%)

Query: 12  QLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRRKLPQKSDTHFEEEEGEEEDGDTE 71
           QLA+AAL GAS +A+S F++H +A++ VL+R                 +E  E  DGD  
Sbjct: 7   QLALAALFGASFVAVSGFFMHFKALNLVLER----------------GKERKENPDGDEP 50

Query: 72  EGDFEEDFGSDGDAIMRQQSQSRLSRSLEDSTLRRYGIS-SSLPNVSVRNDWLEEDAKFD 130
           +             ++R++SQ R  R + D    +YG S +SLP+ +           F 
Sbjct: 51  QNP----------TLVRRRSQVR--RKVND----QYGRSPASLPDAT----------PFT 84

Query: 131 EAIRVRAQNCSASSLD-KLNFIPTGLPSLQTPRR----LEEGQSINRSGSGARLVSLGRL 185
           +       +   S+    ++ IP GLP L TP      +    SI ++GS  R +S    
Sbjct: 85  DGGGGGGGDTGRSNGHVYVDEIPPGLPRLHTPSEGRASVHGASSIRKTGSFVRPIS---- 140

Query: 186 PRTPVGNAFEDSDEDGTEHANEDDITYSNENVDAFAYMISDADSKVQSSSALPFRGDGMN 245
           P++PV +A   S  +  E +++DD   ++E +DA +Y+ ++ D+++ +            
Sbjct: 141 PKSPVASA---SAFESVEESDDDDNLTNSEGLDA-SYLQANGDNEMPA------------ 184

Query: 246 YVQDKNYRATINDAKPALDLHD-NGKVDKASRNAVGTETIL----YNTISQLRTTVHEPT 300
              D N       A   +  H  +G +     + +  + +       T  +L   +  PT
Sbjct: 185 ---DANEEQISMAASSMIRSHSVSGDLHGVQPDPIAADILRKEPEQETFVRLNVPLEVPT 241

Query: 301 NIEEEEVWKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEASKHHF 360
           + +E E +K +QECL+LRKRYVF E VAPW KE   + +  +  ++PF   P   S H F
Sbjct: 242 S-DEVEAYKCLQECLELRKRYVFQETVAPWEKEVISDPSTPKPNTEPFAHYPQGKSDHCF 300

Query: 361 RMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFR 420
            M+DGVVHV+A++    +LFPVA AT FFTD+HH+L++++ GN+RT CH RL  LE+KF 
Sbjct: 301 EMQDGVVHVFANKDAKEDLFPVADATAFFTDLHHVLKVIAAGNIRTLCHRRLVLLEQKFN 360

Query: 421 LHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVI 480
           LHL++NAD EFLAQKSAPHRDFYN+RKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVI
Sbjct: 361 LHLMLNADKEFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVI 420

Query: 481 FRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFL 540
           FRDG Y+TL+EVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFL
Sbjct: 421 FRDGTYLTLREVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFL 480

Query: 541 KQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSEN 600
           KQDNLIQGRFL E+TKQV  DLEASKYQMAEYR+SIYGRK SEWDQLASW +NN++YSEN
Sbjct: 481 KQDNLIQGRFLGEITKQVFSDLEASKYQMAEYRISIYGRKMSEWDQLASWIVNNDLYSEN 540

Query: 601 AIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLV 660
            +WLIQLPRLYN+YK MGIV SFQNI+DN+FIPLFE T+DP SHPQLHVFL  VVGFDLV
Sbjct: 541 VVWLIQLPRLYNIYKDMGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGFDLV 600

Query: 661 DDESKPERRPTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHC 720
           DDESKPERRPTKHMP PA+WTN FNPA+SYY YY YANLY LNKLRESKGM TI LRPH 
Sbjct: 601 DDESKPERRPTKHMPTPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMTTITLRPHS 660

Query: 721 GEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNP 780
           GEAG+IDHLAA FL C++I+HGI+LRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNP
Sbjct: 661 GEAGDIDHLAATFLTCHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNP 720

Query: 781 FPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFS 840
           FP+FF RGLNVSLS+DDPLQIHLTKE LVEEYS+AA VWKLS+CDLCEIARNSVYQSGFS
Sbjct: 721 FPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIARNSVYQSGFS 780

Query: 841 HMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEI 897
           H  KSHW+G  Y+ RGP GNDIHKTNVP+IR+EFR   WKEEMQ VYLG+A+I  E+
Sbjct: 781 HALKSHWIGKDYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYLGKAVISDEV 837

AMP deaminase plays a critical role in energy metabolism. Essential for the transition from zygote to embryo.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 6

>sp\|Q84NP7\|AMPD_ORYSJ Probable AMP deaminase OS=Oryza sativa subsp. japonica GN=AMPD PE=2 SV=1	Back alignment and function description

>sp\|Q54DD0\|AMPD_DICDI AMP deaminase OS=Dictyostelium discoideum GN=amdA PE=1 SV=1	Back alignment and function description

>sp\|Q9DBT5\|AMPD2_MOUSE AMP deaminase 2 OS=Mus musculus GN=Ampd2 PE=1 SV=1	Back alignment and function description

>sp\|Q02356\|AMPD2_RAT AMP deaminase 2 OS=Rattus norvegicus GN=Ampd2 PE=2 SV=2	Back alignment and function description

>sp\|Q01433\|AMPD2_HUMAN AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2	Back alignment and function description

>sp\|P50998\|AMPD_SCHPO AMP deaminase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ada1 PE=1 SV=3	Back alignment and function description

>sp\|P15274\|AMPD_YEAST AMP deaminase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AMD1 PE=1 SV=2	Back alignment and function description

>sp\|O09178\|AMPD3_RAT AMP deaminase 3 OS=Rattus norvegicus GN=Ampd3 PE=2 SV=2	Back alignment and function description

>sp\|O08739\|AMPD3_MOUSE AMP deaminase 3 OS=Mus musculus GN=Ampd3 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		899
296086441		932	unnamed protein product [Vitis vinifera]	0.972	0.937	0.733	0.0
359473383		883	PREDICTED: AMP deaminase-like [Vitis vin	0.969	0.987	0.734	0.0
255558258		918	AMP deaminase, putative [Ricinus communi	0.972	0.952	0.708	0.0
356524116		872	PREDICTED: AMP deaminase-like [Glycine m	0.927	0.956	0.688	0.0
356503248		838	PREDICTED: AMP deaminase-like [Glycine m	0.913	0.979	0.6	0.0
222423343		839	AT2G38280 [Arabidopsis thaliana]	0.912	0.977	0.599	0.0
18404701		839	AMP deaminase [Arabidopsis thaliana] gi\|	0.912	0.977	0.599	0.0
224091022		876	predicted protein [Populus trichocarpa]	0.934	0.958	0.593	0.0
297827385		838	hypothetical protein ARALYDRAFT_482837 [	0.912	0.978	0.601	0.0
255582650		821	AMP deaminase, putative [Ricinus communi	0.902	0.987	0.596	0.0

>gi\|296086441\|emb\|CBI32030.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1304 bits (3374), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/897 (73%), Positives = 734/897 (81%), Gaps = 23/897 (2%)

Query: 11  LQLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRRKLPQKSDTHFEEEEGEEEDGDT 70
           L +AMAALVGASLMAISAFY+HKR+VDQVL RL++IRR  P K+D H     GE  D D 
Sbjct: 48  LHMAMAALVGASLMAISAFYVHKRSVDQVLHRLIDIRRGGPAKADDH---GGGERGDCDD 104

Query: 71  EEGDFEEDFGSDGDAIMRQQSQSRLSRSLEDSTLRRYGISSSLPNVSVRNDWLEEDAKFD 130
            E + E +         R+      SRSL+ + L    +SSSLPN  + + W +E++ FD
Sbjct: 105 AEAEVETN---------RKMRGRGPSRSLDKAALCCRRVSSSLPNAVLDSSWFDEESNFD 155

Query: 131 EAIRVRAQNCSASSLDKLNFIPTGLPSLQTPRRLEEGQSINRSGSGARLVSLGRL--PRT 188
                  Q+ S+   DKLN IP+GLP LQT  + EE  S + SGS  R+  + RL  PR+
Sbjct: 156 PPKPFSVQDFSSCHFDKLNSIPSGLPPLQTAPKDEEHLSASHSGSNVRVAPVSRLMTPRS 215

Query: 189 PVGNAFE---DSDEDGTEHANEDDITY----SNENVDAFAYMISDADSKVQSSSALPFRG 241
             GNAF+   DSDE+GTE    +D  +    +N +VD     I+D +S +Q+S+ LPF+ 
Sbjct: 216 LGGNAFDSAGDSDEEGTELVIGEDTFFNYADTNHSVDFMG--INDLNSNIQNSTLLPFKV 273

Query: 242 DGMNYVQDKNYRATINDAKPALDLHDNGKVDKASRNAVGTETILYNTISQLRTTVHEPTN 301
           D  N  +D+  R T  ++   +DLH NGK+D AS N +GT  I  NTIS LRT V E TN
Sbjct: 274 DNGNCFEDQKCRGTKTESNVGVDLHGNGKMDTASGNILGTRPISANTISPLRTIVQESTN 333

Query: 302 IEEEEVWKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEASKHHFR 361
           +EEEEV +MI+ CLDLR  YV+ EKVAPW K  E  +   E  SDPFHF  VE + HHFR
Sbjct: 334 VEEEEVLEMIRGCLDLRDTYVYREKVAPWEKVTELGSTALETSSDPFHFDLVETTTHHFR 393

Query: 362 MEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRL 421
           MEDGVVHVYAS++DT +LFPVAS+T FFTDMHHILRIM+IGNVR++CHHRLRFLEEKFRL
Sbjct: 394 MEDGVVHVYASKNDTLDLFPVASSTTFFTDMHHILRIMAIGNVRSSCHHRLRFLEEKFRL 453

Query: 422 HLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIF 481
           HLLVNAD EFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIF
Sbjct: 454 HLLVNADREFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIF 513

Query: 482 RDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLK 541
           RDGKY+TL+EVFESLDLTG+DLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLK
Sbjct: 514 RDGKYLTLREVFESLDLTGHDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLK 573

Query: 542 QDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENA 601
           QDNLIQGRFLAE+TKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINN IYSENA
Sbjct: 574 QDNLIQGRFLAELTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNSIYSENA 633

Query: 602 IWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVD 661
           +WLIQLPRLYNVYKQMGIV +FQNI+DNVFIPLFEVTIDPSSHPQLHVFL  VVGFD+VD
Sbjct: 634 VWLIQLPRLYNVYKQMGIVTNFQNILDNVFIPLFEVTIDPSSHPQLHVFLKQVVGFDIVD 693

Query: 662 DESKPERRPTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHCG 721
           DESKPERRPTKHMP PAEWTNEFNPAYSYY YY YANLYTLNKLRESKG+PTIK RPHCG
Sbjct: 694 DESKPERRPTKHMPTPAEWTNEFNPAYSYYAYYCYANLYTLNKLRESKGLPTIKFRPHCG 753

Query: 722 EAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPF 781
           EAG++DHLAAAFLLC+NISHGI+LRKSPVLQYLYYLAQ+GLAMSPLSNNSLFLDY RNPF
Sbjct: 754 EAGDVDHLAAAFLLCHNISHGINLRKSPVLQYLYYLAQVGLAMSPLSNNSLFLDYGRNPF 813

Query: 782 PMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSH 841
           PMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAA+VWKLSSCDLCEIARNSVYQSGFSH
Sbjct: 814 PMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAQVWKLSSCDLCEIARNSVYQSGFSH 873

Query: 842 MAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEID 898
           MAK HWLG KYF+RGP GNDIHKTN+P+ RI FRHETWKEEM YVY G+A  P EID
Sbjct: 874 MAKMHWLGRKYFMRGPEGNDIHKTNLPSTRIAFRHETWKEEMMYVYAGKAKFPEEID 930

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359473383\|ref\|XP_002269215.2\| PREDICTED: AMP deaminase-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255558258\|ref\|XP_002520156.1\| AMP deaminase, putative [Ricinus communis] gi\|223540648\|gb\|EEF42211.1\| AMP deaminase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356524116\|ref\|XP_003530678.1\| PREDICTED: AMP deaminase-like [Glycine max]	Back alignment and taxonomy information

>gi\|356503248\|ref\|XP_003520423.1\| PREDICTED: AMP deaminase-like [Glycine max]	Back alignment and taxonomy information

>gi\|222423343\|dbj\|BAH19646.1\| AT2G38280 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi|18404701|ref|NP_565886.1| AMP deaminase [Arabidopsis thaliana] gi|30687456|ref|NP_850294.1| AMP deaminase [Arabidopsis thaliana] gi|75223196|sp|O80452.2|AMPD_ARATH RecName: Full=AMP deaminase; Short=AtAMPD; AltName: Full=Protein EMBRYONIC FACTOR 1 gi|15810525|gb|AAL07150.1| putative AMP deaminase [Arabidopsis thaliana] gi|20196986|gb|AAC27176.2| putative AMP deaminase [Arabidopsis thaliana] gi|22136884|gb|AAM91786.1| putative AMP deaminase [Arabidopsis thaliana] gi|330254422|gb|AEC09516.1| AMP deaminase [Arabidopsis thaliana] gi|330254423|gb|AEC09517.1| AMP deaminase [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|224091022\|ref\|XP_002309149.1\| predicted protein [Populus trichocarpa] gi\|222855125\|gb\|EEE92672.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297827385\|ref\|XP_002881575.1\| hypothetical protein ARALYDRAFT_482837 [Arabidopsis lyrata subsp. lyrata] gi\|297327414\|gb\|EFH57834.1\| hypothetical protein ARALYDRAFT_482837 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|255582650\|ref\|XP_002532104.1\| AMP deaminase, putative [Ricinus communis] gi\|223528207\|gb\|EEF30266.1\| AMP deaminase, putative [Ricinus communis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		899
TAIR\|locus:2042902		839	FAC1 "EMBRYONIC FACTOR1" [Arab	0.810	0.868	0.653	2.1e-270
DICTYBASE\|DDB_G0292266		790	amdA "AMP deaminase" [Dictyost	0.686	0.781	0.540	8.1e-179
ZFIN\|ZDB-GENE-070713-5		793	ampd2 "adenosine monophosphate	0.611	0.693	0.548	4.3e-169
UNIPROTKB\|E1BLG8		799	AMPD2 "Uncharacterized protein	0.585	0.658	0.561	1.4e-165
ZFIN\|ZDB-GENE-091204-4		796	si:ch211-103a14.2 "si:ch211-10	0.590	0.667	0.553	1.4e-165
MGI\|MGI:88016		798	Ampd2 "adenosine monophosphate	0.585	0.659	0.559	1.8e-165
RGD\|2110		824	Ampd2 "adenosine monophosphate	0.585	0.638	0.559	3e-165
UNIPROTKB\|E2R3Y5		799	AMPD2 "Uncharacterized protein	0.585	0.658	0.557	4.8e-165
UNIPROTKB\|F1P6R6		878	AMPD2 "Uncharacterized protein	0.585	0.599	0.557	4.8e-165
SGD\|S000004498		810	AMD1 "AMP deaminase" [Saccharo	0.615	0.682	0.542	5.7e-165

TAIR\|locus:2042902 FAC1 "EMBRYONIC FACTOR1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2534 (897.1 bits), Expect = 2.1e-270, Sum P(2) = 2.1e-270
 Identities = 490/750 (65%), Positives = 580/750 (77%)

Query:   151 IPTGLPSLQTPRRLEEGQ-SINRSGSGARLVSLGR--LPRTPVGNAFEDSDEDGTEHANE 207
             IP GLP L TP    EG+ S++ + S  +  S  R   P++PV +A   S  +  E +++
Sbjct:   106 IPPGLPRLHTP---SEGRASVHGASSIRKTGSFVRPISPKSPVASA---SAFESVEESDD 159

Query:   208 DDITYSNENVDAFAYMISDADSKVQSSSALPFRGDGMNYVQDKNYRATINDAKPALDLHD 267
             DD   ++E +DA +Y+ ++ D+++ + +      + ++        + I     + DLH 
Sbjct:   160 DDNLTNSEGLDA-SYLQANGDNEMPADA----NEEQISMAAS----SMIRSHSVSGDLH- 209

Query:   268 NGKVDKASRNAVGTETILYNTISQLRTTVHEPTNIEEEEVWKMIQECLDLRKRYVFTEKV 327
               + D  + + +  E     T  +L   +  PT+ +E E +K +QECL+LRKRYVF E V
Sbjct:   210 GVQPDPIAADILRKEPE-QETFVRLNVPLEVPTS-DEVEAYKCLQECLELRKRYVFQETV 267

Query:   328 APWMKEAEPETNISEMRSDPFHFVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATE 387
             APW KE   + +  +  ++PF   P   S H F M+DGVVHV+A++    +LFPVA AT 
Sbjct:   268 APWEKEVISDPSTPKPNTEPFAHYPQGKSDHCFEMQDGVVHVFANKDAKEDLFPVADATA 327

Query:   388 FFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNADGEFLAQKSAPHRDFYNIRK 447
             FFTD+HH+L++++ GN+RT CH RL  LE+KF LHL++NAD EFLAQKSAPHRDFYN+RK
Sbjct:   328 FFTDLHHVLKVIAAGNIRTLCHRRLVLLEQKFNLHLMLNADKEFLAQKSAPHRDFYNVRK 387

Query:   448 VDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDL 507
             VDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDG Y+TL+EVFESLDLTGYDLNVDL
Sbjct:   388 VDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLREVFESLDLTGYDLNVDL 447

Query:   508 LDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKY 567
             LDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFL E+TKQV  DLEASKY
Sbjct:   448 LDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLGEITKQVFSDLEASKY 507

Query:   568 QMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNII 627
             QMAEYR+SIYGRK SEWDQLASW +NN++YSEN +WLIQLPRLYN+YK MGIV SFQNI+
Sbjct:   508 QMAEYRISIYGRKMSEWDQLASWIVNNDLYSENVVWLIQLPRLYNIYKDMGIVTSFQNIL 567

Query:   628 DNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPX 687
             DN+FIPLFE T+DP SHPQLHVFL  VVGFDLVDDESKPERRPTKHMP PA+WTN FNP 
Sbjct:   568 DNIFIPLFEATVDPDSHPQLHVFLKQVVGFDLVDDESKPERRPTKHMPTPAQWTNAFNPA 627

Query:   688 XXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGIHLRK 747
                             KLRESKGM TI LRPH GEAG+IDHLAA FL C++I+HGI+LRK
Sbjct:   628 FSYYVYYCYANLYVLNKLRESKGMTTITLRPHSGEAGDIDHLAATFLTCHSIAHGINLRK 687

Query:   748 SPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEA 807
             SPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFP+FF RGLNVSLS+DDPLQIHLTKE 
Sbjct:   688 SPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEP 747

Query:   808 LVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNV 867
             LVEEYS+AA VWKLS+CDLCEIARNSVYQSGFSH  KSHW+G  Y+ RGP GNDIHKTNV
Sbjct:   748 LVEEYSIAASVWKLSACDLCEIARNSVYQSGFSHALKSHWIGKDYYKRGPDGNDIHKTNV 807

Query:   868 PNIRIEFRHETWKEEMQYVYLGRAIIPVEI 897
             P+IR+EFR   WKEEMQ VYLG+A+I  E+
Sbjct:   808 PHIRVEFRDTIWKEEMQQVYLGKAVISDEV 837

GO:0003876 "AMP deaminase activity" evidence=IEA;IGI;ISS

GO:0006188 "IMP biosynthetic process" evidence=IEA

GO:0009168 "purine ribonucleoside monophosphate biosynthetic process" evidence=IEA;ISS

GO:0019239 "deaminase activity" evidence=IEA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;IMP

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0031307 "integral to mitochondrial outer membrane" evidence=IDA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0009165 "nucleotide biosynthetic process" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0009880 "embryonic pattern specification" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010072 "primary shoot apical meristem specification" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010431 "seed maturation" evidence=RCA

GO:0010564 "regulation of cell cycle process" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0045595 "regulation of cell differentiation" evidence=RCA

GO:0048366 "leaf development" evidence=RCA

GO:0048825 "cotyledon development" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

GO:0051301 "cell division" evidence=RCA

DICTYBASE\|DDB_G0292266 amdA "AMP deaminase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070713-5 ampd2 "adenosine monophosphate deaminase 2 (isoform L)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BLG8 AMPD2 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-091204-4 si:ch211-103a14.2 "si:ch211-103a14.2" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

MGI\|MGI:88016 Ampd2 "adenosine monophosphate deaminase 2" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|2110 Ampd2 "adenosine monophosphate deaminase 2" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|E2R3Y5 AMPD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1P6R6 AMPD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

SGD\|S000004498 AMD1 "AMP deaminase" [Saccharomyces cerevisiae (taxid:4932)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q54DD0	AMPD_DICDI	3, ., 5, ., 4, ., 6	0.5802	0.6496	0.7392	yes	no
O80452	AMPD_ARATH	3, ., 5, ., 4, ., 6	0.5997	0.9121	0.9773	yes	no
P50998	AMPD_SCHPO	3, ., 5, ., 4, ., 6	0.5247	0.6340	0.6859	yes	no
Q84NP7	AMPD_ORYSJ	3, ., 5, ., 4, ., 6	0.6449	0.7875	0.8687	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.4	0.976
3rd Layer	3.5.4.6	0.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	FAC1	FAC1 (EMBRYONIC FACTOR1); AMP deaminase; Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage. ; AMP deaminase plays a critical role in energy metabolism. Essential for the transition from zygote to embryo (839 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	ADSS	ADSS (ADENYLOSUCCINATE SYNTHASE); adenylosuccinate synthase; encoding adenylosuccinate syntheta [...] (490 aa)	•	•	•	0.962
	ADK2	ADK2 (ADENOSINE KINASE 2); adenosine kinase/ copper ion binding / kinase; Encodes adenosine kin [...] (345 aa)		•	•	0.938
	IMPDH	inosine-5'-monophosphate dehydrogenase; inosine-5'-monophosphate dehydrogenase; FUNCTIONS IN- I [...] (503 aa)	•	•	•	0.937
	At3g09820	ADK1 (adenosine kinase 1); adenosine kinase/ copper ion binding; Involved in the salvage synthe [...] (344 aa)		•	•	0.936
	AT5G50370	adenylate kinase, putative; adenylate kinase, putative; FUNCTIONS IN- nucleobase, nucleoside, n [...] (248 aa)		•	•	0.933
	AT1G71750	phosphoribosyltransferase family protein; phosphoribosyltransferase family protein; FUNCTIONS I [...] (188 aa)		•	•	0.929
	AT1G16350	inosine-5'-monophosphate dehydrogenase, putative; inosine-5'-monophosphate dehydrogenase, putat [...] (502 aa)	•	•	•	0.926
	APT3	APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3); adenine phosphoribosyltransferase; Encodes an aden [...] (183 aa)		•	•	0.923
	APT4	adenine phosphoribosyltransferase, putative; APT4; FUNCTIONS IN- adenine phosphoribosyltransfer [...] (182 aa)		•	•	0.922
	F17L21.24	APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1); adenine phosphoribosyltransferase; Adenosine phosp [...] (243 aa)		•	•	0.921

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		899
PLN02768		835	PLN02768, PLN02768, AMP deaminase	0.0
PLN03055		602	PLN03055, PLN03055, AMP deaminase; Provisional	0.0
cd01319		496	cd01319, AMPD, AMP deaminase (AMPD) catalyzes the	0.0
TIGR01429		611	TIGR01429, AMP_deaminase, AMP deaminase	0.0
PTZ00310		1453	PTZ00310, PTZ00310, AMP deaminase; Provisional	1e-179
pfam00962		328	pfam00962, A_deaminase, Adenosine/AMP deaminase	8e-87
PTZ00310		1453	PTZ00310, PTZ00310, AMP deaminase; Provisional	1e-79
COG1816		345	COG1816, Add, Adenosine deaminase [Nucleotide tran	6e-65
cd00443		305	cd00443, ADA_AMPD, Adenosine/AMP deaminase	4e-58
pfam00962		328	pfam00962, A_deaminase, Adenosine/AMP deaminase	3e-18
TIGR01430		324	TIGR01430, aden_deam, adenosine deaminase	7e-12
cd01320		325	cd01320, ADA, Adenosine deaminase (ADA) is a monom	1e-11
PRK09358		340	PRK09358, PRK09358, adenosine deaminase; Provision	6e-11
cd01292		275	cd01292, metallo-dependent_hydrolases, Superfamily	2e-08
cd01321		345	cd01321, ADGF, Adenosine deaminase-related growth	2e-05
TIGR01431		479	TIGR01431, adm_rel, adenosine deaminase-related gr	0.004

>gnl\|CDD\|215411 PLN02768, PLN02768, AMP deaminase	Back alignment and domain information

 Score = 1326 bits (3434), Expect = 0.0
 Identities = 553/903 (61%), Positives = 650/903 (71%), Gaps = 81/903 (8%)

Query: 7   STSSLQLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRRKLPQKSDTHFEEEEGEEE 66
              +L LA+AALVGAS +A+SA+Y+H++ +DQ+L                         E
Sbjct: 2   EPYALHLALAALVGASFVAVSAYYMHRKTLDQLL-------------------------E 36

Query: 67  DGDTEEGDFEEDFGSDGDAIMRQQSQSRLSRSLEDSTLRRYGISSSLPNVSVRNDWLEED 126
              T + + E D   +  + +R++      R            S+SLP+ +    +    
Sbjct: 37  FAKTLDRNREGDEPQNPTSQVRRKGNDYYRRG-----------SASLPDATA---FSGGG 82

Query: 127 AKFDEAIRVRAQNCSASSLDKLNFIPTGLPSLQTPRRLEEGQSINRSGSGARLVSLGRL- 185
              DE                ++ IP GLP L T    E   S++ +GS  R+ S  R  
Sbjct: 83  DDGDEP--------RDGHHVYVDGIPPGLPRLHTGP--EGKASVHGAGSTKRVGSFIRPT 132

Query: 186 -PRTPV--GNAF---EDSDEDGTEHANED-DITY--SNENVDAFAYMISDADSK-VQSSS 235
            P++PV   +AF   E SD++     NE  D TY  +N NV+   +  ++ +   + +SS
Sbjct: 133 SPKSPVASASAFESVEGSDDEDNLTDNEKLDTTYLHTNGNVELPDHADANGEQIPIPASS 192

Query: 236 ALPFRGDGMNYVQDKNYRATINDAKPALDLHDNGKVDKASRNAVGTETILYNTISQLRTT 295
            +                        + DLH   + D  + + +  E     T  +L  T
Sbjct: 193 MIRSHSV-------------------SGDLHGV-QPDPIAADILRKEPE-QETFVRLNIT 231

Query: 296 VHEPTNIEEEEVWKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEA 355
             E  + +E E +K++QECL+LRKRYVF E+VAPW KE   + +  +   +PF + P   
Sbjct: 232 PLEVPSPDEVEAYKVLQECLELRKRYVFREEVAPWEKEIISDPSTPKPNPNPFSYTPEGK 291

Query: 356 SKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFL 415
           S H+F M+DGVVHVYA++    ELFPVA AT FFTD+HHILR+++ GN+RT CHHRL  L
Sbjct: 292 SDHYFEMQDGVVHVYANKDSKEELFPVADATTFFTDLHHILRVIAAGNIRTLCHHRLNLL 351

Query: 416 EEKFRLHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEP 475
           E+KF LHL++NAD EFLAQKSAPHRDFYN+RKVDTHVHHSACMNQKHLLRFIKSKLRKEP
Sbjct: 352 EQKFNLHLMLNADREFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEP 411

Query: 476 DEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRL 535
           DEVVIFRDG Y+TLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRL
Sbjct: 412 DEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRL 471

Query: 536 REIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNE 595
           REIFLKQDNLIQGRFLAE+TKQV  DLEASKYQMAEYR+SIYGRKQSEWDQLASW +NNE
Sbjct: 472 REIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNE 531

Query: 596 IYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVV 655
           +YSEN +WLIQLPRLYNVYK+MGIV SFQNI+DN+FIPLFEVT+DP SHPQLHVFL  VV
Sbjct: 532 LYSENVVWLIQLPRLYNVYKEMGIVTSFQNILDNIFIPLFEVTVDPDSHPQLHVFLKQVV 591

Query: 656 GFDLVDDESKPERRPTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIK 715
           G DLVDDESKPERRPTKHMP PA+WTN FNPA+SYY YY YANLYTLNKLRESKGM TIK
Sbjct: 592 GLDLVDDESKPERRPTKHMPTPAQWTNVFNPAFSYYVYYCYANLYTLNKLRESKGMTTIK 651

Query: 716 LRPHCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLD 775
            RPH GEAG+IDHLAA FL C+NI+HGI+LRKSPVLQYLYYLAQIGLAMSPLSNNSLFLD
Sbjct: 652 FRPHSGEAGDIDHLAATFLTCHNIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLD 711

Query: 776 YHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVY 835
           YHRNPFPMFF RGLNVSLS+DDPLQIHLTKE LVEEYS+AA VWKLSSCDLCEIARNSVY
Sbjct: 712 YHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSSCDLCEIARNSVY 771

Query: 836 QSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPV 895
           QSGFSH  KSHW+G +Y+ RGP GNDIHKTNVP+IR+EFR   WKEEMQ VYLG+A IP 
Sbjct: 772 QSGFSHALKSHWIGKEYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYLGKAKIPE 831

Query: 896 EID 898
           E+D
Sbjct: 832 EVD 834

Length = 835

>gnl\|CDD\|178613 PLN03055, PLN03055, AMP deaminase; Provisional	Back alignment and domain information

>gnl\|CDD\|238644 cd01319, AMPD, AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring	Back alignment and domain information

>gnl\|CDD\|233409 TIGR01429, AMP_deaminase, AMP deaminase	Back alignment and domain information

>gnl\|CDD\|240354 PTZ00310, PTZ00310, AMP deaminase; Provisional	Back alignment and domain information

>gnl\|CDD\|216216 pfam00962, A_deaminase, Adenosine/AMP deaminase	Back alignment and domain information

>gnl\|CDD\|240354 PTZ00310, PTZ00310, AMP deaminase; Provisional	Back alignment and domain information

>gnl\|CDD\|224729 COG1816, Add, Adenosine deaminase [Nucleotide transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|238250 cd00443, ADA_AMPD, Adenosine/AMP deaminase	Back alignment and domain information

>gnl\|CDD\|216216 pfam00962, A_deaminase, Adenosine/AMP deaminase	Back alignment and domain information

>gnl\|CDD\|233410 TIGR01430, aden_deam, adenosine deaminase	Back alignment and domain information

>gnl\|CDD\|238645 cd01320, ADA, Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively	Back alignment and domain information

>gnl\|CDD\|236480 PRK09358, PRK09358, adenosine deaminase; Provisional	Back alignment and domain information

>gnl\|CDD\|238617 cd01292, metallo-dependent_hydrolases, Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>gnl\|CDD\|238646 cd01321, ADGF, Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase	Back alignment and domain information

>gnl\|CDD\|233411 TIGR01431, adm_rel, adenosine deaminase-related growth factor	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		899
PLN02768		835	AMP deaminase	100.0
KOG1096		768	consensus Adenosine monophosphate deaminase [Nucle	100.0
PLN03055		602	AMP deaminase; Provisional	100.0
TIGR01429		611	AMP_deaminase AMP deaminase. This model describes	100.0
PTZ00310		1453	AMP deaminase; Provisional	100.0
cd01319		496	AMPD AMP deaminase (AMPD) catalyzes the hydrolytic	100.0
PTZ00310		1453	AMP deaminase; Provisional	100.0
PF00962		331	A_deaminase: Adenosine/AMP deaminase immunodeficie	100.0
cd00443		305	ADA_AMPD Adenosine/AMP deaminase. Adenosine deamin	100.0
COG1816		345	Add Adenosine deaminase [Nucleotide transport and	100.0
PTZ00124		362	adenosine deaminase; Provisional	100.0
cd01321		345	ADGF Adenosine deaminase-related growth factors (A	100.0
KOG1097		399	consensus Adenine deaminase/adenosine deaminase [N	100.0
TIGR01431		479	adm_rel adenosine deaminase-related growth factor.	100.0
PRK09358		340	adenosine deaminase; Provisional	100.0
TIGR01430		324	aden_deam adenosine deaminase. This family include	100.0
cd01320		325	ADA Adenosine deaminase (ADA) is a monomeric zinc	100.0
TIGR01224		377	hutI imidazolonepropionase. This enzyme catalyzes	99.45
cd01296		371	Imidazolone-5PH Imidazolonepropionase/imidazolone-	99.36
cd01292		275	metallo-dependent_hydrolases Superfamily of metall	99.11
PRK09230		426	cytosine deaminase; Provisional	99.07
cd01305		263	archeal_chlorohydrolases Predicted chlorohydrolase	98.97
PRK07213		375	chlorohydrolase; Provisional	98.86
cd01298		411	ATZ_TRZ_like TRZ/ATZ family contains enzymes from	98.84
cd01293		398	Bact_CD Bacterial cytosine deaminase and related m	98.68
PRK08393		424	N-ethylammeline chlorohydrolase; Provisional	98.62
PRK09356		406	imidazolonepropionase; Validated	98.58
PRK06886		329	hypothetical protein; Validated	98.45
PRK14085		382	imidazolonepropionase; Provisional	98.35
cd01312		381	Met_dep_hydrolase_D Metallo-dependent hydrolases,	98.3
PRK06687		419	chlorohydrolase; Validated	98.25
cd01313		418	Met_dep_hydrolase_E Metallo-dependent hydrolases,	98.23
TIGR02967		401	guan_deamin guanine deaminase. This model describe	98.17
PRK15493		435	5-methylthioadenosine/S-adenosylhomocysteine deami	98.14
cd01303		429	GDEase Guanine deaminase (GDEase). Guanine deamina	98.14
PRK08418		408	chlorohydrolase; Provisional	98.11
PRK12393		457	amidohydrolase; Provisional	98.1
PRK07203		442	putative chlorohydrolase/aminohydrolase; Validated	98.08
TIGR03314		441	Se_ssnA putative selenium metabolism protein SsnA.	98.07
TIGR02022		455	hutF formiminoglutamate deiminase. In some species	98.07
PRK06380		418	metal-dependent hydrolase; Provisional	98.06
PRK09229		456	N-formimino-L-glutamate deiminase; Validated	98.05
PRK09228		433	guanine deaminase; Provisional	98.01
PRK07572		426	cytosine deaminase; Validated	97.97
cd01299		342	Met_dep_hydrolase_A Metallo-dependent hydrolases,	97.95
PRK07583		438	cytosine deaminase-like protein; Validated	97.94
PRK08204		449	hypothetical protein; Provisional	97.89
PRK06038		430	N-ethylammeline chlorohydrolase; Provisional	97.89
PRK09045		443	N-ethylammeline chlorohydrolase; Provisional	97.85
PRK08203		451	hydroxydechloroatrazine ethylaminohydrolase; Revie	97.83
PRK07228		445	N-ethylammeline chlorohydrolase; Provisional	97.71
COG0402		421	SsnA Cytosine deaminase and related metal-dependen	97.55
PRK06151		488	N-ethylammeline chlorohydrolase; Provisional	97.5
KOG3968		439	consensus Atrazine chlorohydrolase/guanine deamina	97.15
cd01309		359	Met_dep_hydrolase_C Metallo-dependent hydrolases,	96.73
cd01300		479	YtcJ_like YtcJ_like metal dependent amidohydrolase	96.72
PRK06846		410	putative deaminase; Validated	96.58
COG1228		406	HutI Imidazolonepropionase and related amidohydrol	96.56
COG1816		345	Add Adenosine deaminase [Nucleotide transport and	96.37
PRK05985		391	cytosine deaminase; Provisional	96.32
cd01306		325	PhnM PhnM is believed to be a subunit of the membr	94.59
PRK15446		383	phosphonate metabolism protein PhnM; Provisional	91.57
PRK12394		379	putative metallo-dependent hydrolase; Provisional	90.03
PF07969		404	Amidohydro_3: Amidohydrolase family; InterPro: IPR	87.85
TIGR02318		376	phosphono_phnM phosphonate metabolism protein PhnM	86.89
TIGR00010		252	hydrolase, TatD family. Several genomes have multi	83.27
COG1574		535	Predicted metal-dependent hydrolase with the TIM-b	81.4

>PLN02768 AMP deaminase	Back alignment and domain information

Probab=100.00  E-value=2.6e-228  Score=1954.80  Aligned_cols=825  Identities=65%  Similarity=1.046  Sum_probs=781.3

Q ss_pred             ChhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccCccCCCCCCCCCcccccCCCchhh
Q 002625            7 STSSLQLAMAALVGASLMAISAFYIHKRAVDQVLDRLVEIRRKLPQKSDTHFEEEEGEEEDGDTEEGDFEEDFGSDGDAI   86 (899)
Q Consensus         7 ~~~~~~~a~aal~gas~~a~sa~~~h~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (899)
                      |+|+||||||||||||+||+||||||||||||||++++|+||++..++.+..+                     |  ++|
T Consensus         2 ~~~~l~la~aalvgas~~a~~a~~~h~~~~~q~~~~~~~~~r~~~~~~~~~~~---------------------~--~~~   58 (835)
T PLN02768          2 EPYALHLALAALVGASFVAVSAYYMHRKTLDQLLEFAKTLDRNREGDEPQNPT---------------------S--QVR   58 (835)
T ss_pred             chhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccCCc---------------------c--ccc
Confidence            78999999999999999999999999999999999999999988777665322                     1  133


Q ss_pred             hhhhccccccccccccccccccccCCCCCcccccc-hhhhhhhhhhhHHhhhccCccccccccCCcCCCCCCCCCCcccc
Q 002625           87 MRQQSQSRLSRSLEDSTLRRYGISSSLPNVSVRND-WLEEDAKFDEAIRVRAQNCSASSLDKLNFIPTGLPSLQTPRRLE  165 (899)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~s~s~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~glp~l~~~~~~~  165 (899)
                      +.+             .+|.+|+|+||||++++++ |++++..     ++|       +.|++|+||+|||||||+||+ 
T Consensus        59 ~~~-------------~~~~~~~~~~~p~~~~~~~~~~~~~~~-----~~~-------~~~~~~~ip~glp~l~t~~~~-  112 (835)
T PLN02768         59 RKG-------------NDYYRRGSASLPDATAFSGGGDDGDEP-----RDG-------HHVYVDGIPPGLPRLHTGPEG-  112 (835)
T ss_pred             cCC-------------ccccccccccCCCcccccCCCCCCCcc-----ccC-------cccccCCCCCCCCCCccCCCC-
Confidence            333             2677999999999999998 8877666     222       779999999999999999987 


Q ss_pred             cCCcccccCCCccccccCCC--CCC--CCCCCCC---CCcccCCccccCCCcccccCCcccccccccCCCccccCCCCcc
Q 002625          166 EGQSINRSGSGARLVSLGRL--PRT--PVGNAFE---DSDEDGTEHANEDDITYSNENVDAFAYMISDADSKVQSSSALP  238 (899)
Q Consensus       166 ~~~~~~~~~s~~~~~~~~~~--~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (899)
                       +++.+++||++|+|+++||  |||  |+|+|||   |||||+ +..+++|+.+.++|+|..++   .++...+||.+.|
T Consensus       113 -~~~~~~~~s~~r~~~~~r~~~p~s~~~~~~a~~~~~~s~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  187 (835)
T PLN02768        113 -KASVHGAGSTKRVGSFIRPTSPKSPVASASAFESVEGSDDED-NLTDNEKLDTTYLHTNGNVE---LPDHADANGEQIP  187 (835)
T ss_pred             -CCcccCccccccccccccCCCCCCCCcccchhhhccCCcccc-ccCCcccccchhhccCCCCC---CccccccCccccc
Confidence             4788999999999999999  999  5677999   897774 45555544444444444444   3778889999999


Q ss_pred             cccCCCcccccccccccccCCCCcccCCCCCCCCccchhccccccccccccceeeecCCCCCChHHHHHHHHHHHHHHHh
Q 002625          239 FRGDGMNYVQDKNYRATINDAKPALDLHDNGKVDKASRNAVGTETILYNTISQLRTTVHEPTNIEEEEVWKMIQECLDLR  318 (899)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~~~~~~~~e~~~~~~~l~~~l~lR  318 (899)
                      +.+++|+       |+|   + +.+||||+ +|||+++||++|||+ +++|||+.|++.+++.+|++++++.|.+||.||
T Consensus       188 ~~~~~~~-------~~~---~-~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r  254 (835)
T PLN02768        188 IPASSMI-------RSH---S-VSGDLHGV-QPDPIAADILRKEPE-QETFVRLNITPLEVPSPDEVEAYKVLQECLELR  254 (835)
T ss_pred             ccchhce-------ecc---c-cCCccccC-CCCchHHHHhhcCch-hhhhhccccccCCCccHHHHHHHHHHHHHHHHH
Confidence            9999999       999   7 99999999 999999999999999 999999999999999999999999999999999


Q ss_pred             hcccCCCCCCCccccCCCCCCCCCCCCCCCccCCCCCCCceEEecCcEEEEEcCCCCCccccCCCCHHHHHHHHHHHHHH
Q 002625          319 KRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRI  398 (899)
Q Consensus       319 ~kY~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~GV~~v~~~~~~~~~~~pips~~eF~~D~~~l~~~  398 (899)
                      +|||+.+..+||.++.+.++.+|++.+|||++.++++++++|+|++|||+||++.+.++..+|+|||++|+.|++.|+++
T Consensus       255 ~ky~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~v~~~~~~~~~~~p~~~~~~F~~D~~~l~~~  334 (835)
T PLN02768        255 KRYVFREEVAPWEKEIISDPSTPKPNPNPFSYTPEGKSDHYFEMQDGVVHVYANKDSKEELFPVADATTFFTDLHHILRV  334 (835)
T ss_pred             HHHccCCCCCCccccccCCCCCCCCCCCCcccCCCCCCCeEEEecCCEEEEeeCCCCCcccCCCCCHHHHHHHHHHHHHH
Confidence            99999988899988877778899999999999888899999999999999999888887889999999999999999999


Q ss_pred             HhccchhhHHHHHHHHHHHHHHHHHhhCchhhhhhhcCCCcccccccCccccceecCCCCCHHHHHHHHHHHhccCCCce
Q 002625          399 MSIGNVRTACHHRLRFLEEKFRLHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEV  478 (899)
Q Consensus       399 i~~g~~ks~c~~RL~yLe~KF~Lh~lLN~~~E~~~~K~~p~rDFyn~pKVDlHvHLsGcm~~k~LlefIk~K~~~~pd~v  478 (899)
                      |++||++|||++||+|||+||+||++||+++|..++|++|||||||+||||+||||++||+|||||+|||+|++++|+++
T Consensus       335 i~dg~~ksfc~~RL~~Le~Kf~Lh~lLN~~~E~~~~K~~phrDFYnvrKVDthvh~sacMnqk~LLrFIk~kl~~epd~v  414 (835)
T PLN02768        335 IAAGNIRTLCHHRLNLLEQKFNLHLMLNADREFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEV  414 (835)
T ss_pred             HhCchHHHHHHHHHHHHHHHHHHHHHhcchhhhHhhccCCCCCceeeeEeeccchhhccCCHHHHHHHHHHHHhcCCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEccCCcccCHHHHHHhcCCCCccCcccccccccccccccccccccccCCCCchhhHHHHHhhcccCCcHHHHHHHHHHH
Q 002625          479 VIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQV  558 (899)
Q Consensus       479 V~~~~Gk~~TL~elF~~l~l~~~dLtvd~L~~~a~~~~fhrfD~Fn~kynP~G~~~Lr~iFLktdn~i~geyLaeltkev  558 (899)
                      |+.++|+.+||+|+|+++++++++||||.|||||++++|||||+||.||||+|+++||++||||||+++|+|||||+|+|
T Consensus       415 V~~~dGk~~TL~evFe~l~lt~ydLsVD~Ldvha~~~tfhRfDkFn~kynP~G~s~LReiFLktDN~i~GrYfAELiK~V  494 (835)
T PLN02768        415 VIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKQV  494 (835)
T ss_pred             eeccCCccccHHHHHHHcCCcccCCcccccccCCCccccccccccccccCccchHHHHHHHcCcCCCCChhhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCccEEEEEEcccccccccHHHHHHHHHhhcccCCceEEEEEecCCcchhhhhhHHHHHHHHHHHhcccccccc
Q 002625          559 LLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVT  638 (899)
Q Consensus       559 iedle~d~vqYaElR~Spyg~s~~ew~~la~wi~~~~l~s~nVRwiIqIpR~y~~~~a~~~V~~fqe~LdnIF~PLfeat  638 (899)
                      +++++++|||++|+|+++||++.+||++||+|+++|++++.|+||+|||||+|+++++.+.|++||++|+|||.||||||
T Consensus       495 ~~dlE~sKyQ~aE~RlsIYGr~~~EW~kLA~W~v~~~l~S~nvRWlIQIPRlY~i~k~~g~v~nFqd~L~NIF~PLFeAT  574 (835)
T PLN02768        495 FSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNELYSENVVWLIQLPRLYNVYKEMGIVTSFQNILDNIFIPLFEVT  574 (835)
T ss_pred             HHHHHhccceeeEEEEEecCCCHHHHHHHHHHHHHcCCCCCCceEEEEcccchhhhhcCCccCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCchhhhhhccccceeeeccCCCCCCCCCCCCCCCCccccccccCcchhhhHHHHHhhhhHHHHHHHcCCCCCCccc
Q 002625          639 IDPSSHPQLHVFLLMVVGFDLVDDESKPERRPTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRP  718 (899)
Q Consensus       639 l~P~~~~~L~~fl~~VVGfDLvgdEs~~e~~~~~~~~~P~~w~~~fnpay~Yy~YY~yaNi~~LN~lRk~~GLnt~~lt~  718 (899)
                      ++|++||+|+.||++|+|||+|+||++.++.++...|.|.+|+...||||+||||||||||++||++|+++|+|||+|||
T Consensus       575 l~P~~hp~L~~FL~~V~GFDsVdDESk~e~~~~~~~p~P~~W~~~~NPPyaYYlYYmyANi~~LN~lR~~rGlNTf~fRP  654 (835)
T PLN02768        575 VDPDSHPQLHVFLKQVVGLDLVDDESKPERRPTKHMPTPAQWTNVFNPAFSYYVYYCYANLYTLNKLRESKGMTTIKFRP  654 (835)
T ss_pred             cCCccCHHHHHHHHhcCCceeecCCCccccccCcCCCChhhCcCCCCCChhhhHHHHHHHHHHHHHHHHHCCCCcccccc
Confidence            99999999999999999999999999999888778899999999999999999999999999999999999999999999


Q ss_pred             ccCCCCChhHHHHhccCCCccccceecccCHHHHHHHHHcCCcEEEeccccccccccCCCCchHHHHhcCCcEEEcCCCC
Q 002625          719 HCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDP  798 (899)
Q Consensus       719 HaGEag~~e~L~~AlL~adRIgHGi~L~kdP~L~yL~~l~qI~IemCPlSN~~L~~~y~~HPf~~~~~~Gl~VSLsTDDP  798 (899)
                      ||||+|++++|+++||+|+|||||+.+.++|.|+|+++++||||+|||+||+.++.+|.+|||++|+++|++||||||||
T Consensus       655 HAGEag~~e~I~~AlL~AdRIgHGv~l~kdP~LqyL~~l~qIgLevCPlSN~~l~~~y~~HPf~~f~~~GL~VSLNTDDP  734 (835)
T PLN02768        655 HSGEAGDIDHLAATFLTCHNIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFLRGLNVSLSTDDP  734 (835)
T ss_pred             ccCCCCCHHHHHHHHhcCCccCCccccCcCHHHHHHHHHcCCeEEECCCcchhhhcchhhChHHHHHHCCCEEEEcCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhchhhhcCCCCCCccccCCChhHHHHHHHH
Q 002625          799 LQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHET  878 (899)
Q Consensus       799 l~F~~T~epL~EEY~vAaq~~~LS~~DL~ELArNSV~~Sf~~~e~K~~wlg~~~~~~g~~gNd~~ktnVp~iR~~~R~et  878 (899)
                      ++||+|++||+|||++|++.|+||.+||||||+|||.+||+++++|++|+|..|.+.|++|||++|||||+||++||+||
T Consensus       735 L~fhtT~epL~EEYsvAak~~~LS~~DL~ELarNSV~aSff~~~~K~~wLg~~y~~~g~~gNd~~ktnVp~iRl~fR~et  814 (835)
T PLN02768        735 LQIHLTKEPLVEEYSIAASVWKLSSCDLCEIARNSVYQSGFSHALKSHWIGKEYYKRGPDGNDIHKTNVPHIRVEFRDTI  814 (835)
T ss_pred             cccCCCCCCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHhcCCHHHHHHHHhccccccCCCCCCccccCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCcCCCccC
Q 002625          879 WKEEMQYVYLGRAIIPVEID  898 (899)
Q Consensus       879 l~~El~~l~~~~~~~~~~~~  898 (899)
                      |++|+++|+.|..++|+++|
T Consensus       815 L~~El~~l~~~~~~~~~~~~  834 (835)
T PLN02768        815 WKEEMQQVYLGKAKIPEEVD  834 (835)
T ss_pred             HHHHHHHHHhhhcccccccC
Confidence            99999999999999999987

>KOG1096 consensus Adenosine monophosphate deaminase [Nucleotide transport and metabolism]	Back alignment and domain information

>PLN03055 AMP deaminase; Provisional	Back alignment and domain information

>TIGR01429 AMP_deaminase AMP deaminase	Back alignment and domain information

>PTZ00310 AMP deaminase; Provisional	Back alignment and domain information

>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring	Back alignment and domain information

>PTZ00310 AMP deaminase; Provisional	Back alignment and domain information

>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3	Back alignment and domain information

>cd00443 ADA_AMPD Adenosine/AMP deaminase	Back alignment and domain information

>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]	Back alignment and domain information

>PTZ00124 adenosine deaminase; Provisional	Back alignment and domain information

>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase	Back alignment and domain information

>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]	Back alignment and domain information

>TIGR01431 adm_rel adenosine deaminase-related growth factor	Back alignment and domain information

>PRK09358 adenosine deaminase; Provisional	Back alignment and domain information

>TIGR01430 aden_deam adenosine deaminase	Back alignment and domain information

>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively	Back alignment and domain information

>TIGR01224 hutI imidazolonepropionase	Back alignment and domain information

>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate	Back alignment and domain information

>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>PRK09230 cytosine deaminase; Provisional	Back alignment and domain information

>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases	Back alignment and domain information

>PRK07213 chlorohydrolase; Provisional	Back alignment and domain information

>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	Back alignment and domain information

>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases	Back alignment and domain information

>PRK08393 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>PRK09356 imidazolonepropionase; Validated	Back alignment and domain information

>PRK06886 hypothetical protein; Validated	Back alignment and domain information

>PRK14085 imidazolonepropionase; Provisional	Back alignment and domain information

>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>PRK06687 chlorohydrolase; Validated	Back alignment and domain information

>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>TIGR02967 guan_deamin guanine deaminase	Back alignment and domain information

>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional	Back alignment and domain information

>cd01303 GDEase Guanine deaminase (GDEase)	Back alignment and domain information

>PRK08418 chlorohydrolase; Provisional	Back alignment and domain information

>PRK12393 amidohydrolase; Provisional	Back alignment and domain information

>PRK07203 putative chlorohydrolase/aminohydrolase; Validated	Back alignment and domain information

>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA	Back alignment and domain information

>TIGR02022 hutF formiminoglutamate deiminase	Back alignment and domain information

>PRK06380 metal-dependent hydrolase; Provisional	Back alignment and domain information

>PRK09229 N-formimino-L-glutamate deiminase; Validated	Back alignment and domain information

>PRK09228 guanine deaminase; Provisional	Back alignment and domain information

>PRK07572 cytosine deaminase; Validated	Back alignment and domain information

>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>PRK07583 cytosine deaminase-like protein; Validated	Back alignment and domain information

>PRK08204 hypothetical protein; Provisional	Back alignment and domain information

>PRK06038 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>PRK09045 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed	Back alignment and domain information

>PRK07228 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]	Back alignment and domain information

>PRK06151 N-ethylammeline chlorohydrolase; Provisional	Back alignment and domain information

>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	Back alignment and domain information

>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases	Back alignment and domain information

>PRK06846 putative deaminase; Validated	Back alignment and domain information

>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK05985 cytosine deaminase; Provisional	Back alignment and domain information

>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex	Back alignment and domain information

>PRK15446 phosphonate metabolism protein PhnM; Provisional	Back alignment and domain information

>PRK12394 putative metallo-dependent hydrolase; Provisional	Back alignment and domain information

>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]	Back alignment and domain information

>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM	Back alignment and domain information

>TIGR00010 hydrolase, TatD family	Back alignment and domain information

>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		899
2a3l_A		701	X-Ray Structure Of Adenosine 5'-Monophosphate Deami		0.0

>pdb|2A3L|A Chain A, X-Ray Structure Of Adenosine 5'-Monophosphate Deaminase From Arabidopsis Thaliana In Complex With Coformycin 5'-Phosphate Length = 701

Back alignment and structure

Iteration: 1

Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/717 (66%), Positives = 557/717 (77%), Gaps = 25/717 (3%) Query: 186 PRTPVGNAFEDSDEDGTEHANEDDITYSNENVDAFAYMISDADSKVQSSSALPFRGDGMN 245 P++PV +A S + E +++DD ++E +DA +Y+ ++ D+++ + Sbjct: 3 PKSPVASA---SAFESVEESDDDDNLTNSEGLDA-SYLQANGDNEMPA------------ 46 Query: 246 YVQDKNYRATINDAKPALDLHD-NGKVDKASRNAVGTETIL----YNTISQLRTTVHEPT 300 D N A + H +G + + + + + T +L + PT Sbjct: 47 ---DANEEQISMAASSMIRSHSVSGDLHGVQPDPIAADILRKEPEQETFVRLNVPLEVPT 103 Query: 301 NIEEEEVWKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEASKHHF 360 + +E E +K +QECL+LRKRYVF E VAPW KE + + + ++PF P S H F Sbjct: 104 S-DEVEAYKCLQECLELRKRYVFQETVAPWEKEVISDPSTPKPNTEPFAHYPQGKSDHCF 162 Query: 361 RMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFR 420 M+DGVVHV+A++ +LFPVA AT FFTD+HH+L++++ GN+RT CH RL LE+KF Sbjct: 163 EMQDGVVHVFANKDAKEDLFPVADATAFFTDLHHVLKVIAAGNIRTLCHRRLVLLEQKFN 222 Query: 421 LHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVI 480 LHL++NAD EFLAQKSAPHRDFYN+RKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVI Sbjct: 223 LHLMLNADKEFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVI 282 Query: 481 FRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFL 540 FRDG Y+TL+EVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFL Sbjct: 283 FRDGTYLTLREVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFL 342 Query: 541 KQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSEN 600 KQDNLIQGRFL E+TKQV DLEASKYQMAEYR+SIYGRK SEWDQLASW +NN++YSEN Sbjct: 343 KQDNLIQGRFLGEITKQVFSDLEASKYQMAEYRISIYGRKMSEWDQLASWIVNNDLYSEN 402 Query: 601 AIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLV 660 +WLIQLPRLYN+YK MGIV SFQNI+DN+FIPLFE T+DP SHPQLHVFL VVGFDLV Sbjct: 403 VVWLIQLPRLYNIYKDMGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGFDLV 462 Query: 661 DDESKPERRPTKHMPKPAEWTNEFNPXXXXXXXXXXXXXXXXXKLRESKGMPTIKLRPHC 720 DDESKPERRPTKHMP PA+WTN FNP KLRESKGM TI LRPH Sbjct: 463 DDESKPERRPTKHMPTPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMTTITLRPHS 522 Query: 721 GEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNP 780 GEAG+IDHLAA FL C++I+HGI+LRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNP Sbjct: 523 GEAGDIDHLAATFLTCHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNP 582 Query: 781 FPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFS 840 FP+FF RGLNVSLS+DDPLQIHLTKE LVEEYS+AA VWKLS+CDLCEIARNSVYQSGFS Sbjct: 583 FPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIARNSVYQSGFS 642 Query: 841 HMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEI 897 H KSHW+G Y+ RGP GNDIHKTNVP+IR+EFR WKEEMQ VYLG+A+I E+ Sbjct: 643 HALKSHWIGKDYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYLGKAVISDEV 699

PyMOL of 2a3l

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		899
2a3l_A		701	AMP deaminase, AMPD; atampd, AT2G38280, adenosine	0.0
3iar_A		367	Adenosine deaminase; purine metabolism structural	1e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-12
3lgd_A		508	Adenosine deaminase CECR1; TIM barrel, dimerizatio	4e-15
3rys_A		343	Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2	5e-15
3pao_A		326	Adenosine deaminase; structural genomics, PSI-2, p	1e-14
2pgf_A		371	Adenosine deaminase; metallo-dependent hydrolase,	6e-13

>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1 Length = 701	Back alignment and structure

 Score =  823 bits (2126), Expect = 0.0
 Identities = 483/710 (68%), Positives = 562/710 (79%), Gaps = 12/710 (1%)

Query: 188 TPVGNAFEDSDEDGTEHANEDDITYSNENVDAFAYMISDADSKVQSSSALPFRGDGMNYV 247
           +P       S  +  E +++DD   ++E +DA +Y+ ++ D+++ + +            
Sbjct: 2   SPKSPVASASAFESVEESDDDDNLTNSEGLDA-SYLQANGDNEMPADANEE--------Q 52

Query: 248 QDKNYRATINDAKPALDLHDNGKVDKASRNAVGTETILYNTISQLRTTVHEPTNIEEEEV 307
                 + I     + DLH   + D  + + +  E      +        E    +E E 
Sbjct: 53  ISMAASSMIRSHSVSGDLHGV-QPDPIAADILRKEPEQETFVR--LNVPLEVPTSDEVEA 109

Query: 308 WKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEASKHHFRMEDGVV 367
           +K +QECL+LRKRYVF E VAPW KE   + +  +  ++PF   P   S H F M+DGVV
Sbjct: 110 YKCLQECLELRKRYVFQETVAPWEKEVISDPSTPKPNTEPFAHYPQGKSDHCFEMQDGVV 169

Query: 368 HVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNA 427
           HV+A++    +LFPVA AT FFTD+HH+L++++ GN+RT CH RL  LE+KF LHL++NA
Sbjct: 170 HVFANKDAKEDLFPVADATAFFTDLHHVLKVIAAGNIRTLCHRRLVLLEQKFNLHLMLNA 229

Query: 428 DGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYM 487
           D EFLAQKSAPHRDFYN+RKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDG Y+
Sbjct: 230 DKEFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYL 289

Query: 488 TLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQ 547
           TL+EVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQ
Sbjct: 290 TLREVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQ 349

Query: 548 GRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIYSENAIWLIQL 607
           GRFL E+TKQV  DLEASKYQMAEYR+SIYGRK SEWDQLASW +NN++YSEN +WLIQL
Sbjct: 350 GRFLGEITKQVFSDLEASKYQMAEYRISIYGRKMSEWDQLASWIVNNDLYSENVVWLIQL 409

Query: 608 PRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPE 667
           PRLYN+YK MGIV SFQNI+DN+FIPLFE T+DP SHPQLHVFL  VVGFDLVDDESKPE
Sbjct: 410 PRLYNIYKDMGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGFDLVDDESKPE 469

Query: 668 RRPTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHCGEAGEID 727
           RRPTKHMP PA+WTN FNPA+SYY YY YANLY LNKLRESKGM TI LRPH GEAG+ID
Sbjct: 470 RRPTKHMPTPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMTTITLRPHSGEAGDID 529

Query: 728 HLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQR 787
           HLAA FL C++I+HGI+LRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFP+FF R
Sbjct: 530 HLAATFLTCHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPVFFLR 589

Query: 788 GLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHW 847
           GLNVSLS+DDPLQIHLTKE LVEEYS+AA VWKLS+CDLCEIARNSVYQSGFSH  KSHW
Sbjct: 590 GLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIARNSVYQSGFSHALKSHW 649

Query: 848 LGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEI 897
           +G  Y+ RGP GNDIHKTNVP+IR+EFR   WKEEMQ VYLG+A+I  E+
Sbjct: 650 IGKDYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYLGKAVISDEV 699

PyMOL of 2a3l

>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ... Length = 367	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A* Length = 508	Back alignment and structure

>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} Length = 343	Back alignment and structure

>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A* Length = 326	Back alignment and structure

>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A Length = 371	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		899
d2a3la1		628	c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalyti	0.0
d1a4ma_		349	c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus	4e-22
d2amxa1		357	c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plas	3e-19

>d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 628	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenosine/AMP deaminase
domain: AMP deaminase (AMPD), catalytic domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  834 bits (2155), Expect = 0.0
 Identities = 467/601 (77%), Positives = 522/601 (86%)

Query: 298 EPTNIEEEEVWKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFHFVPVEASK 357
           E    +E E +K +QECL+LRKRYVF E VAPW KE   + +  +  ++PF   P   S 
Sbjct: 27  EVPTSDEVEAYKCLQECLELRKRYVFQETVAPWEKEVISDPSTPKPNTEPFAHYPQGKSD 86

Query: 358 HHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEE 417
           H F M+DGVVHV+A++    +LFPVA AT FFTD+HH+L++++ GN+RT CH RL  LE+
Sbjct: 87  HCFEMQDGVVHVFANKDAKEDLFPVADATAFFTDLHHVLKVIAAGNIRTLCHRRLVLLEQ 146

Query: 418 KFRLHLLVNADGEFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDE 477
           KF LHL++NAD EFLAQKSAPHRDFYN+RKVDTHVHHSACMNQKHLLRFIKSKLRKEPDE
Sbjct: 147 KFNLHLMLNADKEFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDE 206

Query: 478 VVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLRE 537
           VVIFRDG Y+TL+EVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLRE
Sbjct: 207 VVIFRDGTYLTLREVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLRE 266

Query: 538 IFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLASWFINNEIY 597
           IFLKQDNLIQGRFL E+TKQV  DLEASKYQMAEYR+SIYGRK SEWDQLASW +NN++Y
Sbjct: 267 IFLKQDNLIQGRFLGEITKQVFSDLEASKYQMAEYRISIYGRKMSEWDQLASWIVNNDLY 326

Query: 598 SENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGF 657
           SEN +WLIQLPRLYN+YK MGIV SFQNI+DN+FIPLFE T+DP SHPQLHVFL  VVGF
Sbjct: 327 SENVVWLIQLPRLYNIYKDMGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGF 386

Query: 658 DLVDDESKPERRPTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLR 717
           DLVDDESKPERRPTKHMP PA+WTN FNPA+SYY YY YANLY LNKLRESKGM TI LR
Sbjct: 387 DLVDDESKPERRPTKHMPTPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMTTITLR 446

Query: 718 PHCGEAGEIDHLAAAFLLCNNISHGIHLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYH 777
           PH GEAG+IDHLAA FL C++I+HGI+LRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYH
Sbjct: 447 PHSGEAGDIDHLAATFLTCHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYH 506

Query: 778 RNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQS 837
           RNPFP+FF RGLNVSLS+DDPLQIHLTKE LVEEYS+AA VWKLS+CDLCEIARNSVYQS
Sbjct: 507 RNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIARNSVYQS 566

Query: 838 GFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEI 897
           GFSH  KSHW+G  Y+ RGP GNDIHKTNVP+IR+EFR   WKEEMQ VYLG+A+I  E+
Sbjct: 567 GFSHALKSHWIGKDYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYLGKAVISDEV 626

Query: 898 D 898
            
Sbjct: 627 V 627

PyMOL of d2a3la1

>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]} Length = 349	Back information, alignment and structure

>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} Length = 357	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		899
d2a3la1		628	AMP deaminase (AMPD), catalytic domain {Thale cres	100.0
d1a4ma_		349	Adenosine deaminase (ADA) {Mouse (Mus musculus) [T	100.0
d2amxa1		357	Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI	100.0
d1p1ma2		281	Hypothetical protein TM0936, probable catalytic do	98.81
d2i9ua2		310	Guanine deaminase {Clostridium acetobutylicum [Tax	98.77
d2bb0a2		300	Imidazolonepropionase {Bacillus subtilis [TaxId: 1	98.63
d2uz9a2		313	Guanine deaminase {Human (Homo sapiens) [TaxId: 96	98.5
d2q09a2		301	Probable 4-imidazolone-5-propanoate amidohydrolase	98.38
d2puza2		301	Imidazolonepropionase {Agrobacterium tumefaciens [	97.99
d2imra2		308	Hypothetical protein DR0824 {Deinococcus radiodura	97.95
d2paja2		336	Hypothetical protein GOS_1943094 {Environmental sa	97.76
d1ra0a2		320	Cytosine deaminase catalytic domain {Escherichia c	96.15
d2ooda2		325	Guanine deaminase {Bradyrhizobium japonicum [TaxId	96.0
d2r8ca2		311	Uncharacterized protein EAJ56179 {Unidentified org	94.12
d2qs8a2		310	Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId:	93.82
d2p9ba2		324	Uncharacterized protein BL1453 {Bifidobacterium lo	93.02
d3be7a2		303	Zn-dependent arginine carboxypeptidase {Unidentifi	92.22
d1yrra2		297	N-acetylglucosamine-6-phosphate deacetylase, NagA,	87.65

>d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenosine/AMP deaminase
domain: AMP deaminase (AMPD), catalytic domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=0  Score=1356.92  Aligned_cols=627  Identities=75%  Similarity=1.246  Sum_probs=613.9

Q ss_pred             CCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88911100001211123653111112899999579999999999999732006898888754357998899898899986
Q 002625          270 KVDKASRNAVGTETILYNTISQLRTTVHEPTNIEEEEVWKMIQECLDLRKRYVFTEKVAPWMKEAEPETNISEMRSDPFH  349 (899)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~r~~i~~~~~~~~e~~~~~~~l~~~l~lR~kY~~~~~~~~~~~~~~~~~~~~~~~~~p~~  349 (899)
                      ||||+++++++++++ ...|+||.|++ ++|+.|+++|+++|.+||.||+|||++++.++|..+...+|.+|++..+||.
T Consensus         1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~R~kY~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (628)
T d2a3la1           1 QPDPIAADILRKEPE-QETFVRLNVPL-EVPTSDEVEAYKCLQECLELRKRYVFQETVAPWEKEVISDPSTPKPNTEPFA   78 (628)
T ss_dssp             CCCTTTCCCCCCCCC-SCCCCCCCCCC-CCCCCSTTTTHHHHHHHHHHHHTTSCCCSSCTTSCC------------CCCC
T ss_pred             CCCCCHHHHHCCCCC-HHCEEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             999834666405832-10448887379-8998899999999999998699757898778664435689999987787533


Q ss_pred             CCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             67778988449810967999808998865557899788999999999998236614588898898999999999508002
Q 002625          350 FVPVEASKHHFRMEDGVVHVYASESDTTELFPVASATEFFTDMHHILRIMSIGNVRTACHHRLRFLEEKFRLHLLVNADG  429 (899)
Q Consensus       350 ~~~~~~~~~~~~~~~GV~~v~~~~~~~~~~~pip~~~~F~~D~~~l~~~i~~g~~ks~c~~RL~~Le~KF~Lh~lLN~~~  429 (899)
                      ..+.+++++.|+|++|||+||.+++.....+|+|||++|+.|++.|+++|++||++|||++||+||++||+||++||+++
T Consensus        79 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~~f~~d~~~l~~~~~~~~~~s~~~~RL~~Le~kf~l~~~lN~~~  158 (628)
T d2a3la1          79 HYPQGKSDHCFEMQDGVVHVFANKDAKEDLFPVADATAFFTDLHHVLKVIAAGNIRTLCHRRLVLLEQKFNLHLMLNADK  158 (628)
T ss_dssp             CCCCCCCCCCCCCBTTBCCCCCSSCCSSCSCCCCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             57899876489970758999607887555659999999999999999998474278899999999999999999847445


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             34320278862323667655404237988989999999998413999569803894147999997527887667500000
Q 002625          430 EFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLD  509 (899)
Q Consensus       430 E~~~~K~~p~rDFyn~pKVDlHvHLsGcm~~k~LlefIk~K~~~~p~~vV~~~~Gk~~TL~eiF~~l~l~~~dLtvd~L~  509 (899)
                      |..++|++|||||||+|||||||||+|||+|+||++|||+|++++|+++|+.++|+.+||+|+|+++++++++++++.|+
T Consensus       159 E~~~~k~~~~rDfyn~~KVDlHvHlsg~m~~k~LLefIk~k~~~~pd~vv~~~~gk~~TL~evfe~~~l~~~dltvd~L~  238 (628)
T d2a3la1         159 EFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLREVFESLDLTGYDLNVDLLD  238 (628)
T ss_dssp             HHHHGGGSCSCCTTTSCEEEEEEETTTCSCHHHHHHHHHHHHHTCCSCCCEEETTEEECHHHHHHHHSSCSTTCCSTTCC
T ss_pred             HHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHC
T ss_conf             66763148998634266045205610376989999999997763998467725996154999998549983457703430


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH
Q ss_conf             03455333201101134798743468999842035785899999999999999987953899997145566332899999
Q 002625          510 VHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRVSIYGRKQSEWDQLAS  589 (899)
Q Consensus       510 ~~ad~~~fhrfD~F~~kynP~g~~~Lr~iFL~tdn~i~geyLaeitkeviedle~~~vqyaElR~spyg~~~~ew~~la~  589 (899)
                      ||+++++|||||+|+.||||+|+++||++||+|||+++|+|||+++++|+++++++||||+|+|++|||++.+||++++.
T Consensus       239 ~~~~~~~f~rfD~Fn~kynp~g~~~Lr~~FLktdn~i~G~ylael~kevl~dle~~~vqy~ElR~S~yg~~~~ew~~lA~  318 (628)
T d2a3la1         239 VHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLGEITKQVFSDLEASKYQMAEYRISIYGRKMSEWDQLAS  318 (628)
T ss_dssp             CCSCSSCCCCCSSSHHHHCCSSCCHHHHHHSCSSSTTTTTTHHHHHHHHHHHHTTSSSEEEEEEEECCSSSSTHHHHHHH
T ss_pred             CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
T ss_conf             11571045553320233461116899999872256535699999999999999985976999996666888077888778


Q ss_pred             HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCC
Q ss_conf             99950236786389998227763013432999999999982023232246999933566410440004630389999999
Q 002625          590 WFINNEIYSENAIWLIQLPRLYNVYKQMGIVKSFQNIIDNVFIPLFEVTIDPSSHPQLHVFLLMVVGFDLVDDESKPERR  669 (899)
Q Consensus       590 wi~~~~l~s~nVRwiIqIpR~y~~~~a~~~V~~fqe~L~nIF~PLfeatl~P~~~~~L~~fl~~VVGiDLvgdEs~~e~~  669 (899)
                      |++++++++.++||+||++|.|+++++.+.+.+|+++|+|||.|||+||++|++|++|+.|+++|||||+||||++++..
T Consensus       319 w~v~~~l~s~~~rw~Iqv~rly~~~r~~g~~~sf~~~L~nIF~PLfeatl~p~~~p~L~~fL~~VvGfDlvgdEs~~e~~  398 (628)
T d2a3la1         319 WIVNNDLYSENVVWLIQLPRLYNIYKDMGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGFDLVDDESKPERR  398 (628)
T ss_dssp             HHHTTTCCCSSEEEEEEEECCHHHHTTSSSCSSTHHHHHHHSSHHHHHHHCGGGSTTTHHHHTTEEEEEEESCTTSCCCC
T ss_pred             HHHHCCCCCCCCCEEEEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHCHHHHHHHCCEEEEEEECCCCCCCCC
T ss_conf             99870765667653788755525777378435499999998888999862802377999973866899945653434333


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEECCCCH
Q ss_conf             98899998351010167411456888876564799999759998774454589999637999603798202200055677
Q 002625          670 PTKHMPKPAEWTNEFNPAYSYYTYYFYANLYTLNKLRESKGMPTIKLRPHCGEAGEIDHLAAAFLLCNNISHGIHLRKSP  749 (899)
Q Consensus       670 ~~~~~~~P~~w~~~fnpaysYy~YY~yaNi~~LN~lRk~~GLnti~lt~HaGEag~~e~L~~AlL~adRIgHGi~L~kdP  749 (899)
                      +..+.|.|.+|+...||||+||+|||||||++||++|+++|+|||.+||||||+|+++|+++++|+|+|||||+.+.++|
T Consensus       399 ~~~~~p~P~~w~~~~nPp~~Yy~YY~yANl~~LN~lR~~rg~~~~~lrpH~GE~~~~~~l~~alL~adrIgHGv~l~~~p  478 (628)
T d2a3la1         399 PTKHMPTPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMTTITLRPHSGEAGDIDHLAATFLTCHSIAHGINLRKSP  478 (628)
T ss_dssp             CCSSCCCTTTCCSSSCCCHHHHHHHHHHHHHHHHHHHTTTTCCCCEECCCCSSSSCTHHHHHHHHHCSSCSCCGGGGGCH
T ss_pred             CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCH
T ss_conf             22247983324567798456878899886888999998647887334334578898889999876015456646726999


Q ss_pred             HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             99999998399388906455000125788855899864992998699975735681058999999999859999999999
Q 002625          750 VLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEI  829 (899)
Q Consensus       750 ~L~yL~~l~qI~IevCPlSN~~L~~~y~~HPf~~ll~~GL~VSLSTDDPl~Fh~T~epL~EEYsiAaq~~~LS~~DL~EL  829 (899)
                      .|||+|+++||||||||+||+.++.+|.+|||+.|+++|++||||||||++||+|++||+|||++|+++|+|+.+|||||
T Consensus       479 ~L~~l~~~~qI~le~cPlSN~~l~~~~~~hP~~~~~~~Gl~VsLsTDDPl~f~~t~epL~eEY~~aa~~~~Ls~~dl~el  558 (628)
T d2a3la1         479 VLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEI  558 (628)
T ss_dssp             HHHHHHHHHTCCEEECHHHHTTTTCCSTTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             HHHHHHHHCCCEEEECCCCHHHCCCCHHHCCHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             99999986395499887742111268423909999977995997079963237886538999999999829999999999


Q ss_pred             HHHHHHHHCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             999999908999999999831121029999983103777269999999999999999814776777667
Q 002625          830 ARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEID  898 (899)
Q Consensus       830 ArNSV~~Sff~~e~K~~wlg~~~~~~g~~gnd~~ktnVp~iR~~~R~etl~~El~~i~~~~~~~~~~~~  898 (899)
                      |||||++|||+++.|++|+|..|.+.|++|||++|||||+||++||+|||++||++|+++.+..++++.
T Consensus       559 ArNSV~~S~f~~~~K~~wlG~~y~~~g~~gNd~~~tnvp~iR~~~R~etl~~E~~~l~~~~~~~~~~~~  627 (628)
T d2a3la1         559 ARNSVYQSGFSHALKSHWIGKDYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYLGKAVISDEVV  627 (628)
T ss_dssp             HHHHHHHSCCCHHHHHHHSCTTTTBSSGGGCCHHHHCSCHHHHHHHHHHHHHHHHHHTTTCCCCCSBCC
T ss_pred             HHHHHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             999999818997999987176143158876774416797899999999999999997301368623579

PyMOL of d2a3la1

>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]}	Back information, alignment and structure

>d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]}	Back information, alignment and structure

>d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples}	Back information, alignment and structure

>d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]}	Back information, alignment and structure

>d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824 {Deinococcus radiodurans [TaxId: 1299]}	Back information, alignment and structure

>d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094 {Environmental samples}	Back information, alignment and structure

>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]}	Back information, alignment and structure

>d2r8ca2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]}	Back information, alignment and structure

>d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]}	Back information, alignment and structure

>d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]}	Back information, alignment and structure

>d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]}	Back information, alignment and structure

>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure