Citrus Sinensis ID: 002677
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 893 | 2.2.26 [Sep-21-2011] | |||||||
| Q15751 | 4861 | Probable E3 ubiquitin-pro | yes | no | 0.397 | 0.073 | 0.352 | 5e-52 | |
| Q9FN03 | 440 | Ultraviolet-B receptor UV | no | no | 0.396 | 0.804 | 0.349 | 4e-48 | |
| O95714 | 4834 | E3 ubiquitin-protein liga | no | no | 0.399 | 0.073 | 0.336 | 4e-48 | |
| Q4U2R1 | 4836 | E3 ubiquitin-protein liga | no | no | 0.399 | 0.073 | 0.339 | 5e-48 | |
| Q9VR91 | 4912 | Probable E3 ubiquitin-pro | yes | no | 0.405 | 0.073 | 0.338 | 5e-43 | |
| Q5GLZ8 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.377 | 0.318 | 0.322 | 8e-40 | |
| Q6PAV2 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.340 | 0.287 | 0.330 | 2e-39 | |
| Q5PQN1 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.340 | 0.287 | 0.327 | 7e-39 | |
| Q15034 | 1050 | Probable E3 ubiquitin-pro | no | no | 0.340 | 0.289 | 0.339 | 3e-38 | |
| F2Z461 | 1003 | E3 ISG15--protein ligase | no | no | 0.360 | 0.321 | 0.294 | 6e-33 |
| >sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2 | Back alignment and function desciption |
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Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 270 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 329
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 330 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 386
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 387 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 446
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 447 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 506
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210
Query: 507 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 566
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 567 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 624
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328
Query: 625 DDRNSPSLVEALKDKQVKSIACGTNFTAA 653
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
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Involved in membrane trafficking via some guanine nucleotide exchange factor (GEF) activity and its ability to bind clathrin. Acts as a GEF for Arf and Rab, by exchanging bound GDP for free GTP. Binds phosphatidylinositol 4,5-bisphosphate, which is required for GEF activity. May also act as a E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Homo sapiens (taxid: 9606) EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: - |
| >sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1 | Back alignment and function description |
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| >sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1 | Back alignment and function description |
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| >sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 893 | ||||||
| 359479203 | 1107 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.799 | 0.914 | 0.0 | |
| 255572207 | 1100 | Ran GTPase binding protein, putative [Ri | 0.985 | 0.8 | 0.933 | 0.0 | |
| 224105957 | 1104 | predicted protein [Populus trichocarpa] | 0.992 | 0.802 | 0.916 | 0.0 | |
| 224055315 | 1109 | predicted protein [Populus trichocarpa] | 0.985 | 0.793 | 0.904 | 0.0 | |
| 356554129 | 1106 | PREDICTED: uncharacterized protein LOC10 | 0.984 | 0.794 | 0.910 | 0.0 | |
| 356501403 | 1109 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.798 | 0.905 | 0.0 | |
| 357493985 | 1124 | Lateral signaling target protein-like pr | 0.985 | 0.782 | 0.899 | 0.0 | |
| 356567509 | 1106 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.801 | 0.880 | 0.0 | |
| 449444879 | 1104 | PREDICTED: uncharacterized protein LOC10 | 0.987 | 0.798 | 0.874 | 0.0 | |
| 356526924 | 1099 | PREDICTED: uncharacterized protein LOC10 | 0.986 | 0.801 | 0.876 | 0.0 |
| >gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1626 bits (4211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 815/891 (91%), Positives = 843/891 (94%), Gaps = 6/891 (0%)
Query: 1 MSRTDRMAADLSRTGGSIERDTEQAITALKKGACLLKYGRRGKPKFCPFRLSNDESVLIW 60
MSRTDRMA+DLSRTG + ERDTEQA+TALKKGA LLKYGRRGKPKFCPFRLSNDESVLIW
Sbjct: 1 MSRTDRMASDLSRTGAA-ERDTEQALTALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIW 59
Query: 61 FSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEV 120
FSGKEEK LKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEV
Sbjct: 60 FSGKEEKLLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEV 119
Query: 121 WFSGLKALISRS-HHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSNDSLQKDGGD 179
WFSGLKALISR HHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGS DSLQKDGGD
Sbjct: 120 WFSGLKALISRGGHHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSADSLQKDGGD 179
Query: 180 HLRLHSPYDSPPKNGLDKTFSDVLLYSVPSKAFFPSDTASGSVHSLSSGGSDSVHGHMKA 239
HLRLHSPY+SPPK+ ++K FSDV+LY+VP K FFPSD+ASGSVHSLSSGGSDSVHGHMKA
Sbjct: 180 HLRLHSPYESPPKSVMEKAFSDVILYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHMKA 239
Query: 240 MAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMD 299
M MDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGG +RVGSCFG+KMD
Sbjct: 240 MTMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGSHRVGSCFGMKMD 299
Query: 300 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLID 359
S LPKALESAVVLDVQNIACGGRHAALV KQGE+FSWGEESGGRLGHGVDSDVLHPKLID
Sbjct: 300 SLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLID 359
Query: 360 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 419
+LSN NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI
Sbjct: 360 SLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 419
Query: 420 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 479
HVSSISCGPWHTAVVTS+GQLFTFGDGTFGVLGHGD KSVS PREVESLKG RTV +ACG
Sbjct: 420 HVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACG 479
Query: 480 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 539
VWHTAAVVE+MVGN SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV+PNFCR
Sbjct: 480 VWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCR 539
Query: 540 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 599
VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP RVEGKL+KSFVEEIACG+YHV
Sbjct: 540 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHV 599
Query: 600 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKW 659
AVLTS+TEVYTWGKGANGRLGHGDTDDRNSP+LVEALKDKQVKSIACGTNFTA ICLHKW
Sbjct: 600 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKW 659
Query: 660 VSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDN 719
VSGVDQSMCSGCRLPF NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDN
Sbjct: 660 VSGVDQSMCSGCRLPF-NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDN 718
Query: 720 CFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSE 779
CF+KLRK +TD SS S+VSRRG NQG NE IDKDEKLDSRSR QL RFSSMES KQ+E
Sbjct: 719 CFSKLRKAIETDASSQSAVSRRGVTNQGLNELIDKDEKLDSRSRVQLARFSSMESLKQAE 778
Query: 780 GR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRA 838
R SKRNKKLEFNSSRVSPIPNG SQWG KS NP+FGSSKKFFSASVPGSRIVSR
Sbjct: 779 SRTSKRNKKLEFNSSRVSPIPNGGSQWGG--ALKSLNPVFGSSKKFFSASVPGSRIVSRT 836
Query: 839 TSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 889
TSPISRRPSPPR+ TPTPTL GLTSPKIVVDDAKRTNDSLSQEVIKLR QV
Sbjct: 837 TSPISRRPSPPRAATPTPTLEGLTSPKIVVDDAKRTNDSLSQEVIKLRVQV 887
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa] gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula] gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus] gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 893 | ||||||
| TAIR|locus:505006603 | 1075 | AT5G12350 "AT5G12350" [Arabido | 0.986 | 0.819 | 0.740 | 0.0 | |
| TAIR|locus:2165770 | 1073 | AT5G42140 "AT5G42140" [Arabido | 0.621 | 0.517 | 0.596 | 1.1e-231 | |
| TAIR|locus:2025277 | 1103 | PRAF1 "AT1G76950" [Arabidopsis | 0.714 | 0.578 | 0.525 | 3.5e-224 | |
| TAIR|locus:2086253 | 1045 | AT3G23270 "AT3G23270" [Arabido | 0.534 | 0.456 | 0.600 | 5.9e-210 | |
| TAIR|locus:2079147 | 954 | AT3G47660 "AT3G47660" [Arabido | 0.856 | 0.801 | 0.491 | 4.1e-197 | |
| TAIR|locus:2009739 | 1006 | AT1G65920 [Arabidopsis thalian | 0.469 | 0.416 | 0.553 | 3.1e-164 | |
| TAIR|locus:2163986 | 440 | UVR8 "UVB-RESISTANCE 8" [Arabi | 0.360 | 0.731 | 0.355 | 9e-49 | |
| UNIPROTKB|E1C4H7 | 4863 | HERC1 "Uncharacterized protein | 0.362 | 0.066 | 0.382 | 1.4e-48 | |
| UNIPROTKB|F1S098 | 4859 | HERC1 "Uncharacterized protein | 0.360 | 0.066 | 0.382 | 5.3e-48 | |
| UNIPROTKB|J9NWD8 | 4118 | HERC1 "Uncharacterized protein | 0.360 | 0.078 | 0.379 | 5.7e-48 |
| TAIR|locus:505006603 AT5G12350 "AT5G12350" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3440 (1216.0 bits), Expect = 0., P = 0.
Identities = 658/889 (74%), Positives = 716/889 (80%)
Query: 1 MSRTDRMAADLSRTGGSIERDTEQAITALKKGACLLKYGRRGKPKFCPFRLSNDESVLIW 60
MSR RMA+DLSR G +ERD EQAI ALKKGA LLKYGRRGKPKFCPFRLSNDE+VLIW
Sbjct: 1 MSRNGRMASDLSRAG-PVERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIW 59
Query: 61 FSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEV 120
FSG EEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY++RSLD+ICKDKDEAEV
Sbjct: 60 FSGNEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEV 119
Query: 121 WFSGLKALISRSHHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSNDSLQKDGGDH 180
WF+GLKALIS H R RTESRSDG PSEANSPRTYTRRSSPL+SPF SNDSLQKDG +H
Sbjct: 120 WFTGLKALISHCHQRNRRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNH 179
Query: 181 LRLHSPYDSPPKNGLDKTFSDVLLYSVPSKAFFPSDTAXXXXXXXXXXXXXXXXXXMKAM 240
LR+HSP++SPPKNGLDK FSD+ LY+VP K F+PSD+A M+ M
Sbjct: 180 LRIHSPFESPPKNGLDKAFSDMALYAVPPKGFYPSDSATISVHSGGSDSMHGH---MRGM 236
Query: 241 AMDAFRVXXXXXXXXXXXXXXXXXXXALGDVFIWXXXXXXXXXXXXXXXXXSCFGVKMDS 300
MDAFRV ALGDVFIW S F +KMDS
Sbjct: 237 GMDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDS 296
Query: 301 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 360
LPKALES +VLDVQNIACGG+HA LV KQGE FSWGEES GRLGHGVDS++ PKLIDA
Sbjct: 297 LLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDA 356
Query: 361 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 420
L+ NIELVACGE+H+CAVTLSGDLYTWG G +FG+LGHGNEVSHWVPKRVN LEGIH
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLLEGIH 414
Query: 421 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 480
VSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGHGD+KSV IPREV+SLKGLRTVRAACGV
Sbjct: 415 VSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGV 474
Query: 481 WHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 540
WHTAAVVEVMVG GKLFTWGDGDKGRLGHG+KE KLVPTCVAALVEPNFC+V
Sbjct: 475 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQV 534
Query: 541 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVA 600
ACGHSLTVALTTSGHVYTMGSPVYGQLGN ADGK PNRVEGKL KSFVEEIACG+YHVA
Sbjct: 535 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVA 594
Query: 601 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 660
VLTS+TEVYTWGKG+NGRLGHGD DDRNSP+LVE+LKDKQVKSIACGTNFTAA+C+H+W
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWA 654
Query: 661 SGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNC 720
SG+DQSMCSGCR PF+ FKRKRHNCYNCGLVFCHSC+SKKSLKA MAPNPNKPYRVCD C
Sbjct: 655 SGMDQSMCSGCRQPFS-FKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKC 713
Query: 721 FNKLRKTFDTDXXXXXXXXXXXXINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEG 780
FNKL+KT +TD INQG + IDKD+K DSRS QL RFS MES +Q +
Sbjct: 714 FNKLKKTMETDPSSHSSLSRRGSINQGSDP-IDKDDKFDSRSDGQLARFSLMESMRQVDS 772
Query: 781 RSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVXXXXX 840
R K+NKK EFNSSRVSPIP+GSSQ GALNI+KSFNP+FG+SKKFFSASVPGSRIV
Sbjct: 773 RHKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSFNPVFGASKKFFSASVPGSRIVSRATS 832
Query: 841 XXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRAQV 889
K VVDD KRTND+LSQEV+KLR+QV
Sbjct: 833 PISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQV 881
|
|
| TAIR|locus:2165770 AT5G42140 "AT5G42140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025277 PRAF1 "AT1G76950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2086253 AT3G23270 "AT3G23270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2079147 AT3G47660 "AT3G47660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2009739 AT1G65920 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2163986 UVR8 "UVB-RESISTANCE 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C4H7 HERC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1S098 HERC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9NWD8 HERC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 893 | |||
| cd13365 | 115 | cd13365, PH_PLC_plant-like, Plant-like Phospholipa | 5e-51 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 2e-28 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 4e-28 | |
| cd01248 | 108 | cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfm | 3e-26 | |
| pfam01363 | 68 | pfam01363, FYVE, FYVE zinc finger | 1e-21 | |
| smart00064 | 68 | smart00064, FYVE, Protein present in Fab1, YOTB, V | 5e-20 | |
| cd00065 | 57 | cd00065, FYVE, FYVE domain; Zinc-binding domain; t | 1e-17 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 2e-14 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 2e-13 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 1e-12 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 2e-12 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 9e-12 | |
| cd13363 | 117 | cd13363, PH_PLC_delta, Phospholipase C-delta (PLC- | 1e-09 | |
| cd13364 | 108 | cd13364, PH_PLC_eta, Phospholipase C-eta (PLC-eta) | 7e-08 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 1e-06 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 7e-06 | |
| cd13359 | 126 | cd13359, PH_ELMO1_CED-12, Engulfment and cell moti | 1e-04 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 2e-04 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 4e-04 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 0.004 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 0.004 |
| >gnl|CDD|241519 cd13365, PH_PLC_plant-like, Plant-like Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 5e-51
Identities = 71/115 (61%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Query: 20 RDTEQAITALKKGACLLKYGRRGKPKFCPFRLSNDESVLIWFSGKE--EKHLKLSHVSRI 77
RD E+AIT LK G+ LLKYGRRGKP F FRLS DE L W S K+ EK ++LS VSRI
Sbjct: 1 RDVEEAITQLKIGSNLLKYGRRGKPHFRYFRLSPDELTLYWSSPKKGSEKRVRLSSVSRI 60
Query: 78 ISGQRTPIFQRYPRPEKEYQSFSLIYND--RSLDLICKDKDEAEVWFSGLKALIS 130
I GQRT +F+R P P E QSFS+IY D RSLDL CKD+ E + WF+GL+AL+S
Sbjct: 61 IPGQRTVVFERPPPPGLEEQSFSIIYADGERSLDLTCKDRQEFDTWFTGLRALLS 115
|
PLC-gamma (PLCgamma) was the second class of PLC discovered. PLC-gamma consists of an N-terminal PH domain, a EF hand domain, a catalytic domain split into X and Y halves internal to which is a PH domain split by two SH2 domains and a single SH3 domain, and a C-terminal C2 domain. PLCs (EC 3.1.4.3) play a role in the initiation of cellular activation, proliferation, differentiation and apoptosis. They are central to inositol lipid signalling pathways, facilitating intracellular Ca2+ release and protein kinase C (PKC) activation. Specificaly, PLCs catalyze the cleavage of phosphatidylinositol-4,5-bisphosphate (PIP2) and result in the release of 1,2-diacylglycerol (DAG) and inositol 1,4,5-triphosphate (IP3). These products trigger the activation of protein kinase C (PKC) and the release of Ca2+ from intracellular stores. There are fourteen kinds of mammalian phospholipase C proteins which are are classified into six isotypes (beta, gamma, delta, epsilon, zeta, eta). This cd contains PLC members from fungi and plants. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 115 |
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|241279 cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfment and cell motility protein 1 pleckstrin homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|216454 pfam01363, FYVE, FYVE zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|214499 smart00064, FYVE, Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >gnl|CDD|238022 cd00065, FYVE, FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|241517 cd13363, PH_PLC_delta, Phospholipase C-delta (PLC-delta) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241518 cd13364, PH_PLC_eta, Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|241513 cd13359, PH_ELMO1_CED-12, Engulfment and cell motility protein 1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 893 | |||
| COG5184 | 476 | ATS1 Alpha-tubulin suppressor and related RCC1 dom | 100.0 | |
| KOG1427 | 443 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| COG5184 | 476 | ATS1 Alpha-tubulin suppressor and related RCC1 dom | 100.0 | |
| KOG1427 | 443 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 99.93 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 99.93 | |
| KOG1428 | 3738 | consensus Inhibitor of type V adenylyl cyclases/Ne | 99.87 | |
| cd01248 | 115 | PH_PLC Phospholipase C (PLC) pleckstrin homology ( | 99.83 | |
| KOG1428 | 3738 | consensus Inhibitor of type V adenylyl cyclases/Ne | 99.81 | |
| PF12814 | 123 | Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin | 99.74 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 99.39 | |
| PF01363 | 69 | FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f | 99.29 | |
| smart00064 | 68 | FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | 99.14 | |
| PF00415 | 51 | RCC1: Regulator of chromosome condensation (RCC1) | 99.11 | |
| KOG0941 | 850 | consensus E3 ubiquitin protein ligase [Posttransla | 99.1 | |
| KOG1264 | 1267 | consensus Phospholipase C [Lipid transport and met | 99.07 | |
| PTZ00303 | 1374 | phosphatidylinositol kinase; Provisional | 99.04 | |
| PF00415 | 51 | RCC1: Regulator of chromosome condensation (RCC1) | 99.01 | |
| KOG1818 | 634 | consensus Membrane trafficking and cell signaling | 99.01 | |
| KOG1729 | 288 | consensus FYVE finger containing protein [General | 98.97 | |
| KOG1819 | 990 | consensus FYVE finger-containing proteins [General | 98.93 | |
| KOG0941 | 850 | consensus E3 ubiquitin protein ligase [Posttransla | 98.79 | |
| PF13540 | 30 | RCC1_2: Regulator of chromosome condensation (RCC1 | 98.75 | |
| PF13540 | 30 | RCC1_2: Regulator of chromosome condensation (RCC1 | 98.74 | |
| cd00065 | 57 | FYVE FYVE domain; Zinc-binding domain; targets pro | 98.73 | |
| KOG1842 | 505 | consensus FYVE finger-containing protein [General | 98.3 | |
| KOG2999 | 713 | consensus Regulator of Rac1, required for phagocyt | 98.23 | |
| KOG1409 | 404 | consensus Uncharacterized conserved protein, conta | 98.1 | |
| KOG1841 | 1287 | consensus Smad anchor for receptor activation [Def | 98.07 | |
| cd01244 | 98 | PH_RasGAP_CG9209 RAS_GTPase activating protein (GA | 98.04 | |
| cd01235 | 101 | PH_SETbf Set binding factor Pleckstrin Homology (P | 97.84 | |
| cd01236 | 104 | PH_outspread Outspread Pleckstrin homology (PH) do | 97.8 | |
| KOG1843 | 473 | consensus Uncharacterized conserved protein [Funct | 97.73 | |
| cd01238 | 106 | PH_Tec Tec pleckstrin homology (PH) domain. Tec pl | 97.68 | |
| cd01265 | 95 | PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | 97.5 | |
| cd01264 | 101 | PH_melted Melted pleckstrin homology (PH) domain. | 97.47 | |
| cd01233 | 100 | Unc104 Unc-104 pleckstrin homology (PH) domain. Un | 97.47 | |
| cd01266 | 108 | PH_Gab Gab (Grb2-associated binder) pleckstrin hom | 97.44 | |
| PF00169 | 104 | PH: PH domain; InterPro: IPR001849 The pleckstrin | 97.33 | |
| smart00233 | 102 | PH Pleckstrin homology domain. Domain commonly fou | 97.3 | |
| cd01251 | 103 | PH_centaurin_alpha Centaurin alpha Pleckstrin homo | 97.14 | |
| KOG4424 | 623 | consensus Predicted Rho/Rac guanine nucleotide exc | 97.13 | |
| cd01219 | 101 | PH_FGD FGD (faciogenital dysplasia protein) plecks | 96.92 | |
| cd01220 | 99 | PH_CDEP Chondrocyte-derived ezrin-like domain cont | 96.89 | |
| cd01247 | 91 | PH_GPBP Goodpasture antigen binding protein (GPBP) | 96.88 | |
| cd00821 | 96 | PH Pleckstrin homology (PH) domain. Pleckstrin hom | 96.84 | |
| cd01257 | 101 | PH_IRS Insulin receptor substrate (IRS) pleckstrin | 96.44 | |
| PF15409 | 89 | PH_8: Pleckstrin homology domain | 96.4 | |
| cd01250 | 94 | PH_centaurin Centaurin Pleckstrin homology (PH) do | 96.38 | |
| cd01246 | 91 | PH_oxysterol_bp Oxysterol binding protein (OSBP) P | 96.33 | |
| cd01260 | 96 | PH_CNK Connector enhancer of KSR (Kinase suppresso | 96.07 | |
| cd01256 | 110 | PH_dynamin Dynamin pleckstrin homology (PH) domain | 96.02 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 95.47 | |
| cd00900 | 99 | PH-like Pleckstrin homology-like domain. Pleckstri | 95.33 | |
| cd01252 | 125 | PH_cytohesin Cytohesin Pleckstrin homology (PH) do | 95.17 | |
| KOG1265 | 1189 | consensus Phospholipase C [Lipid transport and met | 95.11 | |
| cd01218 | 104 | PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | 95.06 | |
| PF11725 | 1774 | AvrE: Pathogenicity factor; InterPro: IPR021085 Th | 94.94 | |
| PF15413 | 112 | PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE | 94.89 | |
| cd01261 | 112 | PH_SOS Son of Sevenless (SOS) Pleckstrin homology | 94.44 | |
| cd01241 | 102 | PH_Akt Akt pleckstrin homology (PH) domain. Akt pl | 94.43 | |
| KOG1811 | 1141 | consensus Predicted Zn2+-binding protein, contains | 94.36 | |
| PF08458 | 110 | PH_2: Plant pleckstrin homology-like region; Inter | 94.24 | |
| cd01254 | 121 | PH_PLD Phospholipase D (PLD) pleckstrin homology ( | 93.33 | |
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 93.01 | |
| cd01245 | 98 | PH_RasGAP_CG5898 RAS GTPase-activating protein (GA | 92.83 | |
| PF02318 | 118 | FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 | 90.93 | |
| cd01242 | 112 | PH_ROK Rok (Rho- associated kinase) pleckstrin hom | 90.02 | |
| cd01232 | 114 | PH_TRIO Trio pleckstrin homology (PH) domain. Trio | 89.69 | |
| KOG0943 | 3015 | consensus Predicted ubiquitin-protein ligase/hyper | 89.26 | |
| cd01222 | 97 | PH_clg Clg (common-site lymphoma/leukemia guanine | 87.8 | |
| KOG3669 | 705 | consensus Uncharacterized conserved protein, conta | 87.11 | |
| PLN02153 | 341 | epithiospecifier protein | 86.76 | |
| KOG3669 | 705 | consensus Uncharacterized conserved protein, conta | 84.86 | |
| cd01237 | 106 | Unc112 Unc-112 pleckstrin homology (PH) domain. Un | 84.74 | |
| PF11725 | 1774 | AvrE: Pathogenicity factor; InterPro: IPR021085 Th | 83.24 | |
| cd01253 | 104 | PH_beta_spectrin Beta-spectrin pleckstrin homology | 81.98 |
| >COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=412.86 Aligned_cols=364 Identities=25% Similarity=0.477 Sum_probs=294.9
Q ss_pred cccCCCCcEEEEcCCCCCCccCCCCCCCCccccccccCCCceEeccc--CCCCEEEEEecCCeEEEEEcCCcEEEEeCCC
Q 002677 263 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA--VVLDVQNIACGGRHAALVNKQGEVFSWGEES 340 (893)
Q Consensus 263 ~~l~s~G~Vy~WG~n~~~GqLG~g~~~~~~~~~~~~~~~~P~~v~~~--~~~~V~~Ia~G~~hs~~Lt~dG~Vy~wG~N~ 340 (893)
.....-.+||+||.|. .++||+|.+. +.+..|..+... ....|++++||+.|+++|+.||.||+||.|.
T Consensus 62 ~~~~~~~~v~~~Gsn~-~~eLGlg~de--------~~~~~P~~~~~~~~d~~~i~~~acGg~hsl~ld~Dg~lyswG~N~ 132 (476)
T COG5184 62 HLLVKMASVYSWGSNG-MNELGLGNDE--------TKVDRPQLNPFGRIDKASIIKIACGGNHSLGLDHDGNLYSWGDND 132 (476)
T ss_pred hhhhheeeeEEEecCc-ceeeccCCch--------hcccCceecCcccccceeeEEeecCCceEEeecCCCCEEEeccCc
Confidence 4577889999999999 9999999843 225677766655 4567999999999999999999999999999
Q ss_pred CCCcCCCCC----------------CCccccEEecc----cCCCcEEEEEeCCceEEEEEcCCCEEEcCCCCCCCCccCC
Q 002677 341 GGRLGHGVD----------------SDVLHPKLIDA----LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH 400 (893)
Q Consensus 341 ~GqLG~g~~----------------~~~~~P~~V~~----l~~~~I~~Va~G~~hs~aLT~dG~Vy~wG~n~~~~GqLG~ 400 (893)
.|+||.... .....|..|.. ....+|++++||++++++|+++|+||.||.+ ..+.++.
T Consensus 133 ~G~Lgr~~~~~~~~~~~~~~~~~~~~~~~tP~~v~~~s~~~s~~~vv~l~cg~e~svil~~~G~V~~~gt~--r~~e~~~ 210 (476)
T COG5184 133 DGALGRDIHKDICDQNNDIIDFDDYELESTPFKVPGGSSAKSHLRVVKLACGWEISVILTADGRVYSWGTF--RCGELGQ 210 (476)
T ss_pred ccccccccccccccccccccccchhhcccCCceeeccccccCChheEEeecCCceEEEEccCCcEEEecCc--ccccccc
Confidence 999997661 12567888876 2234899999999999999999999999998 4455555
Q ss_pred CCCc------ceeeeeeecCCCCCceEEEEeeCCCeEEEEecCCeEEEeecCCCcccCCCCCcccccceeeeccCCC-eE
Q 002677 401 GNEV------SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RT 473 (893)
Q Consensus 401 g~~~------~~~~P~~v~~~l~~~~I~~Ia~G~~hs~aLt~~G~Vy~wG~n~~GQLG~g~~~~~~~P~~V~~l~~~-~I 473 (893)
+... .+.+|.++. ...|+++++|..|.++|+++|+||+||+|.+||||....+....+..+..+... .|
T Consensus 211 g~~~~s~k~~~~~~p~~v~----~~~i~qla~G~dh~i~lt~~G~vy~~Gs~qkgqlG~~~~e~~~~~~lv~~~f~i~~i 286 (476)
T COG5184 211 GSYKNSQKTSIQFTPLKVP----KKAIVQLAAGADHLIALTNEGKVYGWGSNQKGQLGRPTSERLKLVVLVGDPFAIRNI 286 (476)
T ss_pred ccccccccceeeeeeeecC----chheeeeccCCceEEEEecCCcEEEecCCcccccCCchhhhcccccccCChhhhhhh
Confidence 5322 234555553 347999999999999999999999999999999999887776666666443332 36
Q ss_pred EEEEeCCceEEEEEEeeecCCCccccCCCcEEEEeCCCCCCcCCCCC----CceeecEEeeccCCCceeeeecCCcEEEE
Q 002677 474 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK----EAKLVPTCVAALVEPNFCRVACGHSLTVA 549 (893)
Q Consensus 474 ~~Va~G~~ht~alte~~~~~s~~~~~~~G~ly~wG~n~~GQLG~g~~----~~~~~P~~V~~l~~~~I~~Ia~G~~htva 549 (893)
..|+||.+|++||. .+|++|+||.|-+||||.+.. .....|+....+.+..|.+|++|+.|+++
T Consensus 287 ~~vacG~~h~~al~------------~~G~i~a~G~n~fgqlg~~~~~~~~a~~tk~~~~~~~~~~~i~~is~ge~H~l~ 354 (476)
T COG5184 287 KYVACGKDHSLALD------------EDGEIYAWGVNIFGQLGAGSDGEIGALTTKPNYKQLLSGVTICSISAGESHSLI 354 (476)
T ss_pred hhcccCcceEEEEc------------CCCeEEEeccchhcccccCcccccceeeccccccccCCCceEEEEecCcceEEE
Confidence 88999999999998 499999999999999999821 22356666667777789999999999999
Q ss_pred EecCCcEEEEcCCCCCcCCCCCCCCC---cCceeccccCCCceEEEEecCCeeEEEecCCeEEEecCCCCCCCCCCCCC-
Q 002677 550 LTTSGHVYTMGSPVYGQLGNPQADGK---LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD- 625 (893)
Q Consensus 550 Lt~dG~Vy~wG~N~~GQLG~~~~~~~---~P~~v~~~l~~~~V~~Is~G~~Ht~aLt~~G~Vy~WG~N~~GQLG~g~~~- 625 (893)
|..+|.||+||.+..+|||.+..... .|..+. ....+.+|+||..|+++.+.+|+||.||+|.+|+||.|+..
T Consensus 355 L~~~G~l~a~Gr~~~~qlg~~~~~~~~~~~~~~ls---~~~~~~~v~~gt~~~~~~t~~gsvy~wG~ge~gnlG~g~~~~ 431 (476)
T COG5184 355 LRKDGTLYAFGRGDRGQLGIQEEITIDVSTPTKLS---VAIKLEQVACGTHHNIARTDDGSVYSWGWGEHGNLGNGPKEA 431 (476)
T ss_pred EecCceEEEecCCccccccCcccceeecCCccccc---cccceEEEEecCccceeeccCCceEEecCchhhhccCCchhh
Confidence 99999999999999999999874321 222222 13459999999999999999999999999999999999755
Q ss_pred CCcccEEec--ccCCCcEEEEccCCCccceeee
Q 002677 626 DRNSPSLVE--ALKDKQVKSIACGTNFTAAICL 656 (893)
Q Consensus 626 ~~~~P~~V~--~l~~~~V~~IacG~~hT~al~~ 656 (893)
+...|+.+. .+....++..-||.++.++.-.
T Consensus 432 ~~~~pt~i~~~~~~~~~~i~~g~~~~~~v~~~~ 464 (476)
T COG5184 432 DVLVPTLIRQPLLSGHNIILAGYGNQFSVIEET 464 (476)
T ss_pred hccccccccccccCCCceEEeccCcceEEEecc
Confidence 556677776 3677788888888888776643
|
|
| >KOG1427 consensus Uncharacterized conserved protein, contains RCC1 domain [Function unknown] | Back alignment and domain information |
|---|
| >COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1427 consensus Uncharacterized conserved protein, contains RCC1 domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis | Back alignment and domain information |
|---|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS) | Back alignment and domain information |
|---|
| >KOG0941 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1264 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PTZ00303 phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS) | Back alignment and domain information |
|---|
| >KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1729 consensus FYVE finger containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1819 consensus FYVE finger-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0941 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B | Back alignment and domain information |
|---|
| >PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B | Back alignment and domain information |
|---|
| >cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >KOG1842 consensus FYVE finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG1841 consensus Smad anchor for receptor activation [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1843 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01238 PH_Tec Tec pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01264 PH_melted Melted pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] | Back alignment and domain information |
|---|
| >smart00233 PH Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00821 PH Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15409 PH_8: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd00900 PH-like Pleckstrin homology-like domain | Back alignment and domain information |
|---|
| >cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1265 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others | Back alignment and domain information |
|---|
| >PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C | Back alignment and domain information |
|---|
| >cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01241 PH_Akt Akt pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1811 consensus Predicted Zn2+-binding protein, contains FYVE domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function | Back alignment and domain information |
|---|
| >cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A | Back alignment and domain information |
|---|
| >cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01232 PH_TRIO Trio pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3669 consensus Uncharacterized conserved protein, contains dysferlin, TECPR and PH domains [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
| >KOG3669 consensus Uncharacterized conserved protein, contains dysferlin, TECPR and PH domains [General function prediction only] | Back alignment and domain information |
|---|
| >cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others | Back alignment and domain information |
|---|
| >cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 893 | ||||
| 4dnv_A | 370 | Crystal Structure Of The W285f Mutant Of Uvb-Resist | 9e-48 | ||
| 4dnv_A | 370 | Crystal Structure Of The W285f Mutant Of Uvb-Resist | 1e-10 | ||
| 4d9s_A | 406 | Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv | 1e-47 | ||
| 4d9s_A | 406 | Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv | 2e-10 | ||
| 4dnw_A | 374 | Crystal Structure Of Uvb-Resistance Protein Uvr8 Le | 2e-47 | ||
| 4dnw_A | 374 | Crystal Structure Of Uvb-Resistance Protein Uvr8 Le | 2e-10 | ||
| 4dnu_A | 372 | Crystal Structure Of The W285a Mutant Of Uvb-Resist | 6e-47 | ||
| 3kci_A | 389 | The Third Rld Domain Of Herc2 Length = 389 | 3e-42 | ||
| 3kci_A | 389 | The Third Rld Domain Of Herc2 Length = 389 | 7e-18 | ||
| 1a12_A | 413 | Regulator Of Chromosome Condensation (Rcc1) Of Huma | 5e-17 | ||
| 1a12_A | 413 | Regulator Of Chromosome Condensation (Rcc1) Of Huma | 4e-05 | ||
| 3mvd_K | 423 | Crystal Structure Of The Chromatin Factor Rcc1 In C | 7e-17 | ||
| 1i2m_B | 402 | Ran-Rcc1-So4 Complex Length = 402 | 1e-16 | ||
| 1i2m_B | 402 | Ran-Rcc1-So4 Complex Length = 402 | 5e-05 | ||
| 3of7_A | 473 | The Crystal Structure Of Prp20p From Saccharomyces | 2e-10 | ||
| 3of7_A | 473 | The Crystal Structure Of Prp20p From Saccharomyces | 7e-07 | ||
| 1joc_A | 125 | Eea1 Homodimer Of C-Terminal Fyve Domain Bound To I | 4e-08 | ||
| 1hyi_A | 65 | Solution Structure Of The Eea1 Fyve Domain Complexe | 7e-06 | ||
| 2yqm_A | 89 | Solution Structure Of The Fyve Domain In Zinc Finge | 8e-06 | ||
| 2yw8_A | 82 | Crystal Structure Of Human Run And Fyve Domain-Cont | 1e-05 | ||
| 1z2q_A | 84 | High-Resolution Solution Structure Of The Lm5-1 Fyv | 1e-05 | ||
| 1dvp_A | 220 | Crystal Structure Of The Vhs And Fyve Tandem Domain | 3e-05 | ||
| 3zyq_A | 226 | Crystal Structure Of The Tandem Vhs And Fyve Domain | 5e-05 | ||
| 3t7l_A | 90 | Crystal Structure Of The Fyve Domain Of Endofin (Zf | 4e-04 |
| >pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance Protein Uvr8 Length = 370 | Back alignment and structure |
|
| >pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance Protein Uvr8 Length = 370 | Back alignment and structure |
| >pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv Resistance Locus 8) Length = 406 | Back alignment and structure |
| >pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv Resistance Locus 8) Length = 406 | Back alignment and structure |
| >pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8 Length = 374 | Back alignment and structure |
| >pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8 Length = 374 | Back alignment and structure |
| >pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance Protein Uvr8 Length = 372 | Back alignment and structure |
| >pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2 Length = 389 | Back alignment and structure |
| >pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2 Length = 389 | Back alignment and structure |
| >pdb|1A12|A Chain A, Regulator Of Chromosome Condensation (Rcc1) Of Human Length = 413 | Back alignment and structure |
| >pdb|1A12|A Chain A, Regulator Of Chromosome Condensation (Rcc1) Of Human Length = 413 | Back alignment and structure |
| >pdb|3MVD|K Chain K, Crystal Structure Of The Chromatin Factor Rcc1 In Complex With The Nucleosome Core Particle Length = 423 | Back alignment and structure |
| >pdb|1I2M|B Chain B, Ran-Rcc1-So4 Complex Length = 402 | Back alignment and structure |
| >pdb|1I2M|B Chain B, Ran-Rcc1-So4 Complex Length = 402 | Back alignment and structure |
| >pdb|3OF7|A Chain A, The Crystal Structure Of Prp20p From Saccharomyces Cerevisiae And Its Binding Properties To Gsp1p And Histones Length = 473 | Back alignment and structure |
| >pdb|3OF7|A Chain A, The Crystal Structure Of Prp20p From Saccharomyces Cerevisiae And Its Binding Properties To Gsp1p And Histones Length = 473 | Back alignment and structure |
| >pdb|1JOC|A Chain A, Eea1 Homodimer Of C-Terminal Fyve Domain Bound To Inositol 1,3-Diphosphate Length = 125 | Back alignment and structure |
| >pdb|1HYI|A Chain A, Solution Structure Of The Eea1 Fyve Domain Complexed With Inositol 1,3-Bisphosphate Length = 65 | Back alignment and structure |
| >pdb|2YQM|A Chain A, Solution Structure Of The Fyve Domain In Zinc Finger Fyve Domain-Containing Protein 12 Length = 89 | Back alignment and structure |
| >pdb|2YW8|A Chain A, Crystal Structure Of Human Run And Fyve Domain-Containing Protein Length = 82 | Back alignment and structure |
| >pdb|1Z2Q|A Chain A, High-Resolution Solution Structure Of The Lm5-1 Fyve Domain From Leishmania Major Length = 84 | Back alignment and structure |
| >pdb|1DVP|A Chain A, Crystal Structure Of The Vhs And Fyve Tandem Domains Of Hrs, A Protein Involved In Membrane Trafficking And Signal Transduction Length = 220 | Back alignment and structure |
| >pdb|3ZYQ|A Chain A, Crystal Structure Of The Tandem Vhs And Fyve Domains Of Hepatocyte Growth Factor-Regulated Tyrosine Kinase Substrate (Hgs-Hrs) At 1.48 A Resolution Length = 226 | Back alignment and structure |
| >pdb|3T7L|A Chain A, Crystal Structure Of The Fyve Domain Of Endofin (Zfyve16) At 1.1a Resolution Length = 90 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
Score = 438 bits (1130), Expect = e-147
Identities = 135/395 (34%), Positives = 192/395 (48%), Gaps = 31/395 (7%)
Query: 269 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 328
G ++ WG G LGG +P E+ L + G + V
Sbjct: 20 GTIYGWGHNH-RGQLGGI---------EGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 69
Query: 329 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA--CGEYHTCAVTLSGDLY 386
G++++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y
Sbjct: 70 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 129
Query: 387 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 446
+WG+ G LGHGN P+ + L GI V ++ G H+A VT+AG L+T+G G
Sbjct: 130 SWGEAED--GKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 186
Query: 447 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW--HTAAVVEVMVGNSSSSNCSSGKL 504
+G LGH D + P+ VE+L+G R V ACG T + +
Sbjct: 187 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT------------DDDTV 234
Query: 505 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 564
++WGDGD G+LG G + VP + +L +V CG +VALT SG VYT G Y
Sbjct: 235 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 294
Query: 565 GQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 623
+LG+ D P +V+G L V IA GS H T EVYTWG G+LG G
Sbjct: 295 HRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 353
Query: 624 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 658
T+ P LV AL+ K+V +ACG+ T A K
Sbjct: 354 TNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSK 388
|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B Length = 413 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 Length = 131 | Back alignment and structure |
|---|
| >1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A Length = 125 | Back alignment and structure |
|---|
| >2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A Length = 82 | Back alignment and structure |
|---|
| >1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major} Length = 84 | Back alignment and structure |
|---|
| >3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A Length = 203 | Back alignment and structure |
|---|
| >1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1 Length = 88 | Back alignment and structure |
|---|
| >3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens} Length = 90 | Back alignment and structure |
|---|
| >1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 84 | Back alignment and structure |
|---|
| >1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1 Length = 73 | Back alignment and structure |
|---|
| >1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1 Length = 220 | Back alignment and structure |
|---|
| >3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A* Length = 226 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} Length = 434 | Back alignment and structure |
|---|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885 | Back alignment and structure |
|---|
| >1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1 Length = 120 | Back alignment and structure |
|---|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799 | Back alignment and structure |
|---|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406 | Back alignment and structure |
|---|
| >1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1 Length = 134 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus} Length = 153 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 893 | ||||
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 1e-39 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 3e-22 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 4e-21 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 6e-20 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 7e-20 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 8e-15 | |
| d1maia_ | 119 | b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus | 3e-31 | |
| d2zkmx3 | 131 | b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human | 4e-23 | |
| d1joca1 | 64 | g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) | 1e-18 | |
| d1dvpa2 | 72 | g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila me | 4e-17 | |
| d1vfya_ | 67 | g.50.1.1 (A:) vps27p protein {Baker's yeast (Sacch | 2e-16 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 2e-16 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 1e-06 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 2e-06 | |
| d1wfka_ | 88 | g.50.1.1 (A:) Zinc finger FYVE domain containing p | 7e-16 | |
| d1zbdb_ | 124 | g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat | 7e-16 | |
| d1y02a2 | 51 | g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger pro | 6e-13 |
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (377), Expect = 1e-39
Identities = 94/409 (22%), Positives = 158/409 (38%), Gaps = 50/409 (12%)
Query: 269 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 328
G V G+G G LG G N M+ P + DV GG H ++
Sbjct: 15 GLVLTLGQGD-VGQLGLGEN--------VMERKKPALVSIPE--DVVQAEAGGMHTVCLS 63
Query: 329 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 388
K G+V+S+G G LG + + V+ G+ HT A+T G ++ W
Sbjct: 64 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 123
Query: 389 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 448
G N G++G + + + V ++ G H ++T+ G L+T G G
Sbjct: 124 GSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQ 181
Query: 449 GVLGHGDRKSVS----------------IPREVESLKGLRTVRAACGVWHTAAVVEVMVG 492
G LG + + + S +R A CG + T A+
Sbjct: 182 GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI------ 235
Query: 493 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA--CGHSLTVAL 550
G ++ +G + +LG E+ +P + + V G TV +
Sbjct: 236 ------SHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCM 289
Query: 551 TTSGHVYTMGSPVYGQLGNPQA--DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 608
+ G Y++G YG+LG + + +P + V +ACG+ +T V
Sbjct: 290 DSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL---PAVSSVACGASVGYAVTKDGRV 346
Query: 609 YTWGKGANGRLGHGDTDDRNSPSLV--EALKDKQVKSIACGTNFTAAIC 655
+ WG G N +LG G +D SP + + L+++ V S++ G T +
Sbjct: 347 FAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLV 395
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 119 | Back information, alignment and structure |
|---|
| >d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 131 | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} Length = 64 | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 72 | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 893 | |||
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 100.0 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 100.0 | |
| d1maia_ | 119 | Phospholipase C delta-1 {Rat (Rattus norvegicus) [ | 99.93 | |
| d2zkmx3 | 131 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.84 | |
| d1joca1 | 64 | Eea1 {Human (Homo sapiens) [TaxId: 9606]} | 99.47 | |
| d1wfka_ | 88 | Zinc finger FYVE domain containing protein 19 {Mou | 99.32 | |
| d1dvpa2 | 72 | Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7 | 99.29 | |
| d1vfya_ | 67 | vps27p protein {Baker's yeast (Saccharomyces cerev | 99.23 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 98.75 | |
| d1y02a2 | 51 | Rififylin (FYVE-RING finger protein Sakura) {Human | 98.58 | |
| d1zbdb_ | 124 | Effector domain of rabphilin-3a {Rat (Rattus norve | 98.4 | |
| d1btka_ | 169 | Bruton's tyrosine kinase {Human (Homo sapiens) [Ta | 98.39 | |
| d1v5ua_ | 117 | SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ | 98.18 | |
| d2coaa1 | 112 | Protein kinase c, d2 type {Human (Homo sapiens) [T | 97.9 | |
| d1faoa_ | 100 | Dual adaptor of phosphotyrosine and 3-phosphoinosi | 97.87 | |
| d1v5pa_ | 126 | Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | 97.86 | |
| d1eaza_ | 103 | Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | 97.83 | |
| d1x1fa1 | 136 | Signal-transducing adaptor protein 1, STAP-1 {Huma | 97.81 | |
| d1x1ga1 | 116 | Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | 97.8 | |
| d1u5da1 | 106 | Src kinase-associated phosphoprotein SKAP55 (SCAP1 | 97.69 | |
| d2coda1 | 102 | Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 | 97.68 | |
| d1omwa2 | 119 | G-protein coupled receptor kinase 2 (beta-adrenerg | 97.65 | |
| d1u5fa1 | 111 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 97.65 | |
| d1u5ea1 | 209 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 97.65 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.63 | |
| d1wg7a_ | 150 | Dedicator of cytokinesis protein 9, DOCK9 {Human ( | 97.63 | |
| d1wi1a_ | 126 | Calcium-dependent activator protein for secretion, | 97.6 | |
| d1qqga1 | 103 | Insulin receptor substrate 1, IRS-1 {Human (Homo s | 97.51 | |
| d1v5ma_ | 136 | SH2 and PH domain-containing adapter protein APS { | 97.49 | |
| d2i5fa1 | 104 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 97.48 | |
| d1w1ha_ | 147 | 3-phosphoinositide dependent protein kinase-1 {Hum | 97.43 | |
| d1plsa_ | 113 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 97.43 | |
| d1v89a_ | 118 | Rho-GTPase-activating protein 25 (KIAA0053) {Human | 97.2 | |
| d2cofa1 | 95 | KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | 97.14 | |
| d2coca1 | 99 | FYVE, RhoGEF and PH domain containing protein 3, F | 97.13 | |
| d2fjla1 | 101 | Phosphoinositide phospholipase C, PLC-gamma-1 {Rat | 97.1 | |
| d1wgqa_ | 109 | FYVE, RhoGEF and PH domain containing protein 6, F | 96.99 | |
| d1wjma_ | 123 | beta-spectrin {Human (Homo sapiens), brain 2 isofo | 96.9 | |
| d1upqa_ | 107 | Phosphoinositol 3-phosphate binding protein-1, PEP | 96.86 | |
| d1unqa_ | 118 | Rac-alpha serine/threonine kinase {Human (Homo sap | 96.57 | |
| d1fgya_ | 127 | Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | 96.52 | |
| d1v88a_ | 130 | Oxysterol binding protein-related protein 8 (ORP-8 | 96.4 | |
| d2elba2 | 101 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 96.38 | |
| d1droa_ | 122 | beta-spectrin {Fruit fly (Drosophila melanogaster) | 96.35 | |
| d1v61a_ | 132 | Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ | 96.34 | |
| d2dfka2 | 162 | Rho guanine nucleotide exchange factor 9, Collybis | 96.14 | |
| d1ntya2 | 121 | Triple functional domain protein TRIO {Human (Homo | 95.93 | |
| d1kz7a2 | 147 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 95.9 | |
| d1btna_ | 106 | beta-spectrin {Mouse (Mus musculus), brain [TaxId: | 95.9 | |
| d1xcga2 | 140 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 95.86 | |
| d2j59m1 | 133 | Rho GTPase-activating protein 21 {Human (Homo sapi | 95.75 | |
| d1zc3b1 | 109 | Exocyst complex protein EXO84 {Rat (Rattus norvegi | 95.49 | |
| d2dyna_ | 111 | Dynamin {Human (Homo sapiens) [TaxId: 9606]} | 95.45 | |
| d1txda2 | 114 | Rho guanine nucleotide exchange factor 12 {Human ( | 95.27 | |
| d1ki1b2 | 142 | GEF of intersectin {Human (Homo sapiens) [TaxId: 9 | 92.49 | |
| d1fhoa_ | 119 | UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: | 91.88 | |
| d2adza1 | 105 | Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 1 | 91.61 | |
| d1dbha2 | 133 | Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ | 86.8 |
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=471.51 Aligned_cols=370 Identities=26% Similarity=0.433 Sum_probs=312.8
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEECC
Q ss_conf 87422388994999838999973489888777335655567783672346889879999648759999849919999389
Q 002677 260 SGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 339 (893)
Q Consensus 260 ~~~~~~~s~G~Vy~WG~n~~~GqLG~g~~~~~~~~~~~~~~~~P~~i~~~~~~~V~~Ia~G~~ht~~lt~~G~Vy~wG~n 339 (893)
.|.++++.+|+||+||.|. .||||+|.+. .+...|.+++.+. +|++|+||..|+++|+.+|+||+||.|
T Consensus 6 ~h~~~~~~~G~vy~wG~n~-~GqLG~g~~~--------~~~~~P~~v~~~~--~i~~ia~G~~h~~al~~~G~vy~wG~n 74 (401)
T d1a12a_ 6 SHRSHSTEPGLVLTLGQGD-VGQLGLGENV--------MERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCN 74 (401)
T ss_dssp CCTTCCCCCBEEEEEEECT-TSTTCSCTTC--------CEEEEEEEECCSS--CEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred EEEEEECCCCEEEEEECCC-CCCCCCCCCC--------CEECCCEEECCCC--CEEEEEECCCEEEEEECCCEEEEEECC
T ss_conf 6789997898899996999-8888999988--------6503577908999--929999189889999679989999589
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 99976788997743347840368983899970795699998389899919998898745899984144213644899996
Q 002677 340 SGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 419 (893)
Q Consensus 340 ~~GqLG~g~~~~~~~P~~V~~l~~~~I~~Ia~G~~ht~aLT~dG~Vy~wG~n~~~~GqLG~g~~~~~~~P~~V~~~l~g~ 419 (893)
.+||||++...+...|.++......+|++|+||..|+++++++|+||+||.+.+..++++.........+.... ....
T Consensus 75 ~~GQLG~g~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 152 (401)
T d1a12a_ 75 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDV 152 (401)
T ss_dssp TTSTTCSCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE--CCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEE--CCCC
T ss_conf 99887744655664235542354220022011100101000345311202145655544666775431001100--1688
Q ss_pred EEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCC-----------CCCCEEEE-----CCCCCEEEEEEECCCEE
Q ss_conf 099986279727999059809982069986568999965-----------33454552-----15898399998279647
Q 002677 420 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS-----------VSIPREVE-----SLKGLRTVRAACGVWHT 483 (893)
Q Consensus 420 ~I~~Ia~G~~Ht~alt~~G~vy~wG~n~~GQLG~g~~~~-----------~~~P~~V~-----~l~~~~V~~VacG~~ht 483 (893)
+|++|+||..|+++++.+|++|+||.|.+||||++.... ...|..+. .....++..|+||.+|+
T Consensus 153 ~i~~i~~g~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~v~~g~~~~ 232 (401)
T d1a12a_ 153 PVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFT 232 (401)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEE
T ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEE
T ss_conf 50699820352256503785003466876622888753445677555443356520000356777784399999368769
Q ss_pred EEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECEEEECCCC--CCEEEEECCCCEEEEEECCCCEEEECC
Q ss_conf 999985314888643689929999389999768999875131088501478--963554137868999964991999909
Q 002677 484 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE--PNFCRVACGHSLTVALTTSGHVYTMGS 561 (893)
Q Consensus 484 ~aite~~~~~~~~~~~~~G~Ly~WG~n~~GqLG~g~~~~~~~P~~V~~l~~--~~I~~Ia~G~~htiaLt~dG~Vy~wG~ 561 (893)
++|+ .+|++|+||.|.++++|.........+..+..+.. ..++.+++|..|+++|+++|+||+||.
T Consensus 233 ~~l~------------~~g~v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~l~~~g~v~~wG~ 300 (401)
T d1a12a_ 233 FAIS------------HEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 300 (401)
T ss_dssp EEEE------------TTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred EEEE------------CCCEEEEECCCCEECCCCCCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEEECC
T ss_conf 9995------------5981865122210203545663100000101235540369998510120135614897888403
Q ss_pred CCCCCCCCCCCCCC--CCCEECCCCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEECC--CC
Q ss_conf 99886799999998--670211456788669999667802787059969996189999789999999866679522--57
Q 002677 562 PVYGQLGNPQADGK--LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA--LK 637 (893)
Q Consensus 562 N~~GQLG~~~~~~~--~P~~v~~~l~~~~V~~Is~G~~Ht~aLt~~G~Vy~WG~n~~GQLG~g~~~~~~~P~~V~~--l~ 637 (893)
|.+||||.+..... .|..++.. ..|++|+||.+|+++|+++|+||+||.|.+||||+|+..+...|++|.. +.
T Consensus 301 n~~gqlG~g~~~~~~~~P~~i~~~---~~i~~Is~G~~hs~alt~dG~v~~WG~n~~GQLG~G~~~~~~~P~~v~~~~~~ 377 (401)
T d1a12a_ 301 AEYGRLGLGEGAEEKSIPTLISRL---PAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLE 377 (401)
T ss_dssp CGGGTTCSCTTCCCEEEEEECCSS---SSEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTTTT
T ss_pred CCCCCCCCCCCCCCCCCCEECCCC---CCEEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCEECCEEEECCCCC
T ss_conf 346756788623335588885799---98299993088799994899699992599887789999888607896435789
Q ss_pred CCCEEEECCCCCCCCEEEEE
Q ss_conf 99599970478732106531
Q 002677 638 DKQVKSIACGTNFTAAICLH 657 (893)
Q Consensus 638 ~~~V~~IacG~~hT~ai~~~ 657 (893)
+.+|.+|+||.+||++|+..
T Consensus 378 ~~~v~~v~~G~~hs~~l~~d 397 (401)
T d1a12a_ 378 NRVVLSVSSGGQHTVLLVKD 397 (401)
T ss_dssp TEEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEECCCEEEEEEEC
T ss_conf 98899999752439999979
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
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| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} | Back information, alignment and structure |
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| >d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
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| >d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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