Citrus Sinensis ID: 002692

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890--
MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
ccHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHccHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccHccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHccccccccccccccccccHHHcccccccccccHHHHHHHHHccccccEEEccccccHEEEEEEHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHEccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHvashslhepEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGClleddsswcnaassdpihpqksvdckfshltdEVFNSRISEASTSVKKLhadtsvnlircpylaNLEIERRKLLYGKNNNDELMEAVLEYFLSFghlacftsDVEDFLLVLSLDKKTELLERLkssstshsteSIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYckslplskdldpqesihgeELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFlelsneigsksvtfnedwqsrpwwtptpdknyllgpfagisycpkenlMKEREANILGVVERKSLLPRLIYLSIQTASACVkenfevngsicdpkvSSELKYLLDRYAKMLGFSLRDAVEVVSGVssglnsseafGADMVGWLNFAVFLNAwnlsshevvlpdvngcrhSTWQVVNTLLKKCILEVrsmeslvcypqldLSVLVQLVTEPLAWHTLVMQScvrsslpsgkkkkrsgsadhstsplshdirgsvqstSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLeangrgegpgQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEAStsvkklhadtsvnlircpyLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLErlkssstshstesikelGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNeigsksvtfnedwqsrpwWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFevngsicdpkVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVrsslpsgkkkkrsgsadhstsplshdirgsvqstSGVVEEVAKWLGhhikksedeKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNggekllllaegllkkHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKssstshstesIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAvevvsgvssglnsseAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
****MGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAA**********VDCKFSHLTDEVFNSRI*****SVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTEL***************IKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSL**************EELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIE*EESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCV************************************VVEEVAKWLGHHIK*********IF************GQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKI*************
MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVL******KLLLLAEGL***********EPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEAS***************RCPYLANLEIERRKLLY****NDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLER***************LGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKS************IHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNY*LGPF****Y*************ILGVVERKSLLPRLIYLSIQTA********************SELKYLLDRYAKMLGFSLRDAVEVVSG*********AFGADMVGWLNFAVFLNAWNLSSHEV***********TWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSC*************************HDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEAN***EGPGQVFRLLGTLI**********RISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQM***
MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLE*************IKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSC************************************GVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSL**********
MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSS*****************SPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQ****
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MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLxxxxxxxxxxxxxxxxxxxxxxxxxxxxKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query892 2.2.26 [Sep-21-2011]
Q6QI44970 N-alpha-acetyltransferase yes no 0.542 0.498 0.237 3e-29
Q14CX7972 N-alpha-acetyltransferase yes no 0.542 0.497 0.243 7e-29
Q8BWZ3972 N-alpha-acetyltransferase yes no 0.542 0.497 0.237 2e-28
Q9VDQ7948 Phagocyte signaling-impai yes no 0.539 0.507 0.256 4e-28
Q294E0962 Phagocyte signaling-impai yes no 0.538 0.498 0.251 8e-28
Q17DK2940 Phagocyte signaling-impai N/A no 0.511 0.485 0.231 6e-23
Q7PYI4990 Phagocyte signaling-impai yes no 0.520 0.468 0.230 5e-17
Q9Y809811 N-terminal acetyltransfer yes no 0.498 0.548 0.235 4e-09
Q21986958 N-terminal acetyltransfer yes no 0.512 0.477 0.210 6e-08
>sp|Q6QI44|NAA25_RAT N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Rattus norvegicus GN=Naa25 PE=2 SV=1 Back     alignment and function desciption
 Score =  130 bits (328), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 125/526 (23%), Positives = 231/526 (43%), Gaps = 42/526 (7%)

Query: 7   LFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCG---NGGEKLLL-LAE 62
           LF  Y R   + K QQ  + +YK   +  +  W+V S+ +Q +     N  + + L LAE
Sbjct: 119 LFMAYARVGEYKKMQQAGMALYKIVPKNPYYFWSVMSLIMQSISARDENLSKTMFLPLAE 178

Query: 63  GLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLL 122
            +++K V    +     + +Y  ILE+  KY +AL+++ G LG  L  E+     +   +
Sbjct: 179 RMVEKMVKEDKIEAEAEVELYYMILERLGKYQEALDVIRGKLGEKLTSEIQSRENKCMAM 238

Query: 123 ARQ-GDYTAAAQIYKKILELSPDDWECFLHYLGCLLE-DDSSWCNAASSD-----PIHPQ 175
            ++   +     + +++L  + DDW+ +L Y   +    + +W   A  +      +H  
Sbjct: 239 YKKLSKWPECNALSRRLLLKNSDDWQFYLTYFDSVFRLIEEAWTPPAEGEHSLEGEVHCS 298

Query: 176 KSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNN 235
                KF          RI+EAS S +          +R P+LA LE+ RR  L  +  N
Sbjct: 299 AEDAVKF-------IEDRITEASQSSRH---------VRGPHLAKLELIRR--LRSQGCN 340

Query: 236 DELM-----EAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSS-STSHSTES 289
           DE       E + +YF  FG   C  +D++ F+ +L   + T+ + +L      S  TE 
Sbjct: 341 DEFRLGDPEELMFQYFKKFGDKPCCFTDLKVFVDLLPAAQCTQFINQLLGVVPLSTPTED 400

Query: 290 -------IKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQE 342
                  I+ L   + + ++  L+G  + +  ++      ++   Y   L   +     E
Sbjct: 401 KLALPADIRGLQQHLCVVQLTRLLGLYHSMDKNQKLDVVRELMLRYQHGLEFGRSCLKTE 460

Query: 343 SIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLG 402
               +    +A +VL+ ++          +A+ +LE GLT      Q+K+LLV +Y  LG
Sbjct: 461 LQFSDYYCLLAVHVLIDIWREAGEETAVWQALTLLEEGLTHSPSNAQFKLLLVRIYCVLG 520

Query: 403 ALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADL 462
           A     + Y +LD K+I  +T+ + +         +  ++      LRF   + +++++ 
Sbjct: 521 AFEPVVDLYSSLDAKHIQHDTIGYLLTRYAASLGQYAAASQSCNFALRFFHSNQKDTSEY 580

Query: 463 TFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNAN 508
              AY++  + K+ EF+ F+ RL  S  +   R E  +L L   AN
Sbjct: 581 IIQAYKYGAFEKIPEFIAFRNRLNNSLHFAQVRTERMLLDLLLEAN 626
Non-catalytic subunit of the NatB complex which catalyzes acetylation of the N-terminal methionine residues of peptides beginning with Met-Asp-Glu (By similarity). May play a role in normal cell-cycle progression.
Rattus norvegicus (taxid: 10116)
>sp|Q14CX7|NAA25_HUMAN N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Homo sapiens GN=NAA25 PE=1 SV=1 Back     alignment and function description
>sp|Q8BWZ3|NAA25_MOUSE N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus GN=Naa25 PE=1 SV=1 Back     alignment and function description
>sp|Q9VDQ7|NAA25_DROME Phagocyte signaling-impaired protein OS=Drosophila melanogaster GN=psidin PE=2 SV=1 Back     alignment and function description
>sp|Q294E0|NAA25_DROPS Phagocyte signaling-impaired protein OS=Drosophila pseudoobscura pseudoobscura GN=psidin PE=3 SV=3 Back     alignment and function description
>sp|Q17DK2|NAA25_AEDAE Phagocyte signaling-impaired protein OS=Aedes aegypti GN=psidin PE=3 SV=2 Back     alignment and function description
>sp|Q7PYI4|NAA25_ANOGA Phagocyte signaling-impaired protein OS=Anopheles gambiae GN=psidin PE=3 SV=5 Back     alignment and function description
>sp|Q9Y809|NAA25_SCHPO N-terminal acetyltransferase B complex subunit arm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arm1 PE=3 SV=1 Back     alignment and function description
>sp|Q21986|NAA25_CAEEL N-terminal acetyltransferase B complex subunit NAA25 homolog OS=Caenorhabditis elegans GN=R13F6.10 PE=3 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query892
224126907 1041 predicted protein [Populus trichocarpa] 1.0 0.856 0.703 0.0
225434443 1009 PREDICTED: N-alpha-acetyltransferase 25, 0.996 0.881 0.692 0.0
297745817 1561 unnamed protein product [Vitis vinifera] 0.969 0.554 0.691 0.0
255550595 1014 TPR repeat-containing protein R13F6.10, 1.0 0.879 0.698 0.0
356539676 1016 PREDICTED: phagocyte signaling-impaired 0.995 0.874 0.664 0.0
356565964 1017 PREDICTED: phagocyte signaling-impaired 0.995 0.873 0.665 0.0
297793381 1018 hypothetical protein ARALYDRAFT_358061 [ 0.980 0.859 0.620 0.0
28392921 1046 unknown protein [Arabidopsis thaliana] 0.983 0.838 0.626 0.0
42568628 1065 tetratricopeptide repeat-containing prot 0.983 0.823 0.626 0.0
10177022 1028 unnamed protein product [Arabidopsis tha 0.983 0.853 0.609 0.0
>gi|224126907|ref|XP_002319956.1| predicted protein [Populus trichocarpa] gi|222858332|gb|EEE95879.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1300 bits (3363), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/922 (70%), Positives = 746/922 (80%), Gaps = 30/922 (3%)

Query: 1    MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLL 60
            ++ MMGLFNCYVREYSFVKQQQTAIKMYK  GEERFLLWAVCSIQLQV CGNGGEKL +L
Sbjct: 120  LELMMGLFNCYVREYSFVKQQQTAIKMYKLVGEERFLLWAVCSIQLQVFCGNGGEKLAML 179

Query: 61   AEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGR 120
            AEGLLKKHVASHSLHEPEAL+VYISILEQQ KYGDALEILSG LGSLL+IEVDKLR+QGR
Sbjct: 180  AEGLLKKHVASHSLHEPEALMVYISILEQQEKYGDALEILSGQLGSLLMIEVDKLRIQGR 239

Query: 121  LLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDC 180
            LLAR GDY  +A IY+KILEL PDDWECFLHYLGCLLED SSW N A++DPI+P K VDC
Sbjct: 240  LLARSGDYATSANIYQKILELCPDDWECFLHYLGCLLEDGSSWSNGANNDPINPPKPVDC 299

Query: 181  KFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELME 240
            K S L D+VF+SRIS +   VKKL ADTS + IRCPYLA LEIERRK L+GK N+D+++E
Sbjct: 300  KVSQLADDVFHSRISTSLAFVKKLQADTSNDFIRCPYLATLEIERRKRLHGKGNDDDIVE 359

Query: 241  AVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLK 300
            A++ YFL FGHLA F+SDVE FL VL+ DKKTE L +L  +  S ++   K LG  IT+ 
Sbjct: 360  ALMLYFLKFGHLASFSSDVEAFLQVLTPDKKTEFLAKLIKTLDSSASAPTKVLGQSITIF 419

Query: 301  KIQELIGNTYKLLVD-----------------------------ELERSAVQMSEMYCKS 331
            KIQEL GN YKL V                              ELE  AVQM EMYCKS
Sbjct: 420  KIQELTGNMYKLPVLGACFFCFFCTHTLAHPTHNLLHIQTAQPLELEGCAVQMVEMYCKS 479

Query: 332  LPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYK 391
            LPLSKDLDPQES+HGEELLSM  NVLVQLFWRT + GYF+EAIMVLEFGLT+RR+ WQYK
Sbjct: 480  LPLSKDLDPQESMHGEELLSMVCNVLVQLFWRTRHLGYFIEAIMVLEFGLTIRRYIWQYK 539

Query: 392  VLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRF 451
            +LL+HLYSHLGA+ LAYEWYK+LDVKNILMETVSHHILPQMLVS LW + NNLL+DYLRF
Sbjct: 540  ILLLHLYSHLGAISLAYEWYKSLDVKNILMETVSHHILPQMLVSPLWGDLNNLLKDYLRF 599

Query: 452  MDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIE 511
            MDDH RESADLTFLAYRHRNYSKVIEFVQFKERLQRS+QYLVARVE+ ILQLKQ A+NIE
Sbjct: 600  MDDHFRESADLTFLAYRHRNYSKVIEFVQFKERLQRSNQYLVARVETPILQLKQKADNIE 659

Query: 512  EEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPK 571
            EEE VLENL  GV F+ELSNEIGSK++TFNED+QSRPWWTPT +KNYLLGPF G+SYCPK
Sbjct: 660  EEEGVLENLNGGVHFVELSNEIGSKNLTFNEDFQSRPWWTPTTEKNYLLGPFEGVSYCPK 719

Query: 572  ENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLD 631
            ENL KERE N+ GV+E+KSLLPR+IYLSI  ASA +KE+ E NGS+   K+SSE K+LL+
Sbjct: 720  ENLTKEREENVRGVIEKKSLLPRMIYLSIHNASASLKESVEENGSVSGSKISSEFKFLLE 779

Query: 632  RYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVN 691
            R+AKMLGFSL DAVEVV GVSSG+ S EAFG+D + W+NFAVFLNAWNL+SHE + P+ +
Sbjct: 780  RHAKMLGFSLSDAVEVVMGVSSGVKSFEAFGSDEIDWINFAVFLNAWNLNSHEPLQPNGD 839

Query: 692  GCRHSTWQVVNTLLKKCILE-VRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRS 750
             C    W VV+TLL K I E ++SMESL+C P++DL +LVQLVTEPLAWH LV+QSCVRS
Sbjct: 840  QCGRGIWYVVDTLLVKYISEKIKSMESLICSPRVDLPILVQLVTEPLAWHGLVIQSCVRS 899

Query: 751  SLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFS 810
            SLPSGKKKK+ G  D  +S + +DIR S+QS   +V+EVAKW+   I + EDE ++ I S
Sbjct: 900  SLPSGKKKKKGGPVDQHSSLVFNDIRDSIQSLCDIVKEVAKWIRGQIDRPEDESVEIILS 959

Query: 811  SLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSA 870
            SL    + EGPG+VF +L +LI S+NEAELGDRISQ +K+WSP+DVARK V G    LS 
Sbjct: 960  SLRKKEQDEGPGRVFHVLESLIPSINEAELGDRISQELKTWSPLDVARKIVTGDSTLLSQ 1019

Query: 871  FLRICESKIKSLQALKQQMAQV 892
            FL ICESKIKS QAL QQ+AQ+
Sbjct: 1020 FLNICESKIKSFQALNQQIAQI 1041

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434443|ref|XP_002273069.1| PREDICTED: N-alpha-acetyltransferase 25, NatB auxiliary subunit [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745817|emb|CBI15873.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255550595|ref|XP_002516347.1| TPR repeat-containing protein R13F6.10, putative [Ricinus communis] gi|223544513|gb|EEF46031.1| TPR repeat-containing protein R13F6.10, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356539676|ref|XP_003538321.1| PREDICTED: phagocyte signaling-impaired protein-like [Glycine max] Back     alignment and taxonomy information
>gi|356565964|ref|XP_003551205.1| PREDICTED: phagocyte signaling-impaired protein-like [Glycine max] Back     alignment and taxonomy information
>gi|297793381|ref|XP_002864575.1| hypothetical protein ARALYDRAFT_358061 [Arabidopsis lyrata subsp. lyrata] gi|297310410|gb|EFH40834.1| hypothetical protein ARALYDRAFT_358061 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|28392921|gb|AAO41896.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42568628|ref|NP_200653.2| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332009671|gb|AED97054.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|10177022|dbj|BAB10260.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query892
TAIR|locus:21712281065 AT5G58450 [Arabidopsis thalian 0.983 0.823 0.602 1.2e-285
ZFIN|ZDB-GENE-041111-190975 naa25 "N(alpha)-acetyltransfer 0.594 0.543 0.242 5.7e-30
DICTYBASE|DDB_G0293234937 DDB_G0293234 "N-acetyltransfer 0.627 0.597 0.227 7e-29
MGI|MGI:2442563972 Naa25 "N(alpha)-acetyltransfer 0.559 0.513 0.243 1.2e-28
RGD|1305685970 Naa25 "N(alpha)-acetyltransfer 0.594 0.546 0.235 1.6e-28
UNIPROTKB|Q14CX7972 NAA25 "N-alpha-acetyltransfera 0.586 0.538 0.236 7.2e-28
UNIPROTKB|Q294E0962 psidin "Phagocyte signaling-im 0.544 0.505 0.245 4.9e-26
FB|FBgn0243511948 psidin "phagocyte signaling im 0.545 0.513 0.242 6e-25
UNIPROTKB|Q17DK2940 psidin "Phagocyte signaling-im 0.526 0.5 0.228 1.2e-19
UNIPROTKB|Q7PYI4990 psidin "Phagocyte signaling-im 0.532 0.479 0.225 9.3e-15
TAIR|locus:2171228 AT5G58450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2744 (971.0 bits), Expect = 1.2e-285, P = 1.2e-285
 Identities = 541/898 (60%), Positives = 672/898 (74%)

Query:     1 MDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNXXXXXXXX 60
             ++ MMGLFNCYVREYSFVKQQQTAIKMYK AGEERFLLWAVCSIQLQVLC          
Sbjct:   183 LELMMGLFNCYVREYSFVKQQQTAIKMYKLAGEERFLLWAVCSIQLQVLCDKSGEKLLLL 242

Query:    61 XXXXXXXHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGR 120
                    H+ASHS+HEPEAL+VYIS+LEQQSKY DALE+LSG LGSLL+IEVDKLR+QGR
Sbjct:   243 AEGLLKKHIASHSMHEPEALMVYISLLEQQSKYNDALEVLSGDLGSLLMIEVDKLRIQGR 302

Query:   121 LLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDC 180
             LLAR  DY+AA  +YKKILELSPDDWECFLHYLGCLLEDDS W    + D IHP K ++C
Sbjct:   303 LLARANDYSAAVDVYKKILELSPDDWECFLHYLGCLLEDDSIWKYFDNIDQIHPTKHIEC 362

Query:   181 KFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELME 240
             KFSHLT+E+F+SRIS AS  V+KL  D   + +R PYLA LEIE+RK L+GK N D+L+E
Sbjct:   363 KFSHLTEEMFDSRISSASDLVQKLQRDAENSNLRGPYLAELEIEKRKFLFGKKNEDKLLE 422

Query:   241 AVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKXXXXXXXXXXIKELGWFITLK 300
             ++L+YFL FGHLAC+ SDVE +L VLS +KK   +E L            K LG   T+ 
Sbjct:   423 SLLQYFLKFGHLACYASDVEAYLQVLSPNKKAGFVEMLVKNSDSSASAT-KVLGQTTTIL 481

Query:   301 KIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQL 360
             K+QEL GN + L  DE+E SAV+++++YC++L LSKDLDPQES+ GEELLS+ SN+LVQL
Sbjct:   482 KVQELTGNIFGLPTDEIEASAVKLAKLYCQNLSLSKDLDPQESMFGEELLSLISNMLVQL 541

Query:   361 FWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNIL 420
             FWRT ++GY  EAIMVLE GLT+R H WQYK+LL+H+YS++GALPLA+E YKALDVKNIL
Sbjct:   542 FWRTRDFGYLAEAIMVLELGLTIRGHVWQYKILLLHIYSYVGALPLAFERYKALDVKNIL 601

Query:   421 METVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQ 480
              ETVSHHIL QML S +WV+ +NLL+DYL+FMDDHLRESADLTFLAYRHRNYSKVIEFV 
Sbjct:   602 TETVSHHILRQMLESPMWVDLSNLLKDYLKFMDDHLRESADLTFLAYRHRNYSKVIEFVL 661

Query:   481 FKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTF 540
             FK+RLQ S+QY  ARVE+S+LQLKQNA++ EEEE +LENLK GV  +ELSNEIGS+++ F
Sbjct:   662 FKQRLQHSNQYQAARVEASVLQLKQNADSFEEEERILENLKSGVQLVELSNEIGSRTLKF 721

Query:   541 NEDWQSRPWWTPTPDKNYLLGPFAGISYCP-KENLMKEREANILGVVERKSLLPRLIYLS 599
             NED Q+RPWWTP P+KNYLLGPF  ISYCP KEN+ +ERE N+   ++RKSLLPR+IYLS
Sbjct:   722 NEDMQTRPWWTPCPEKNYLLGPFEEISYCPPKENVKEEREENMKRAIQRKSLLPRMIYLS 781

Query:   600 IQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAXXXXXXXXXXXXXXX 659
             IQ     +KE+ E NGS  D  V  ELK LL+ Y KMLG SL DA               
Sbjct:   782 IQCTPTALKESVETNGSGGDIDVCEELKCLLEDYTKMLGCSLSDAVEMITEISQGARTSE 841

Query:   660 AFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILE-VRSMESL 718
             + G+++V WLNFAVF NAW+LSS E          H  W V+N+L ++ IL+ VRSM S 
Sbjct:   842 SLGSNLVDWLNFAVFWNAWSLSSQE----------H--WHVLNSLFERLILDRVRSMGSS 889

Query:   719 ---VCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADH-STSPLSHD 774
                 CY   D+ VLVQ++TEPLAWH+L++Q+C RSSLPSGKKKK++  +D  S+SP+S  
Sbjct:   890 DMSSCYS--DVQVLVQIITEPLAWHSLIIQACTRSSLPSGKKKKKNQHSDQLSSSPISQA 947

Query:   775 IRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISS 834
             I+ S+Q     +++V+ WL + +   ED +++   ++L+ +G   GPGQ+  +L + I+S
Sbjct:   948 IKDSIQLLCSTIQDVSNWLLNQLNNPEDGQVEGFLTTLKRDGNAAGPGQILGVLESFIAS 1007

Query:   835 LNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV 892
               E+E+G+RI QA+KSW+  D ARK V  Q+  L  FL+ICESK K L+ LKQQM+ V
Sbjct:  1008 SEESEVGNRIFQALKSWNTADTARKTVMAQQRVLREFLQICESKRKLLETLKQQMSHV 1065
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005829 "cytosol" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
ZFIN|ZDB-GENE-041111-190 naa25 "N(alpha)-acetyltransferase 25, NatB auxiliary subunit" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0293234 DDB_G0293234 "N-acetyltransferase, non-catalytic subunit" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:2442563 Naa25 "N(alpha)-acetyltransferase 25, NatB auxiliary subunit" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305685 Naa25 "N(alpha)-acetyltransferase 25, NatB auxiliary subunit" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q14CX7 NAA25 "N-alpha-acetyltransferase 25, NatB auxiliary subunit" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q294E0 psidin "Phagocyte signaling-impaired protein" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] Back     alignment and assigned GO terms
FB|FBgn0243511 psidin "phagocyte signaling impaired" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q17DK2 psidin "Phagocyte signaling-impaired protein" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms
UNIPROTKB|Q7PYI4 psidin "Phagocyte signaling-impaired protein" [Anopheles gambiae (taxid:7165)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query892
pfam09797364 pfam09797, NatB_MDM20, N-acetyltransferase B compl 1e-69
pfam1341469 pfam13414, TPR_11, TPR repeat 8e-04
pfam12569516 pfam12569, NARP1, NMDA receptor-regulated protein 0.002
>gnl|CDD|220409 pfam09797, NatB_MDM20, N-acetyltransferase B complex (NatB) non catalytic subunit Back     alignment and domain information 
 Score =  234 bits (599), Expect = 1e-69
 Identities = 106/353 (30%), Positives = 177/353 (50%), Gaps = 6/353 (1%)

Query: 192 SRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGH 251
               E+  ++ +   D S    R PYLA LE+ +R +  G  N  +L++ VL+YF  FG 
Sbjct: 18  KEEVESVLNILESLEDASKPKSRNPYLARLELLKRLVDSGFANGGDLLDLVLQYFDRFGD 77

Query: 252 LACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYK 311
             C   D++ +L  L  +K+  L+E+L S   S  ++   +L   I   K++ L G  + 
Sbjct: 78  KLCCFGDLKKYLEDLDKEKRKALIEKLLSKIGSEKSD-ENDLIRHINALKLERLCGLWHS 136

Query: 312 LLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFM 371
           L  + +     ++  +Y + L L K L   E    ++L  +A N L+ L+  T +  Y +
Sbjct: 137 LPEESVIALVSELYLLYEEGLSLEKKL-ATERQPSDDLALLAVNSLLDLYLSTKDLEYLL 195

Query: 372 EAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQ 431
           EAI +LE GL    H +  K+LL+ LY  LGA  LA E Y+ LD+KNI  +T+ H +  +
Sbjct: 196 EAIALLENGLKKSPHNYDLKLLLIRLYLLLGAASLALEHYEKLDIKNIQHDTLGHLLFTR 255

Query: 432 MLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQY 491
           +        +++     LRF  + LRE+++L   A+ + +YSK+ EF++F+ RL  S   
Sbjct: 256 LSTGGPNKSASSAFEQALRFYLNSLRETSELISKAFENGSYSKIEEFIEFRRRLTNSLSR 315

Query: 492 LVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDW 544
            +  VE+  L    N   +E  ++ LE L        L N I  + ++ N D+
Sbjct: 316 AMLAVENLRLSRLLNGKRVELLKAYLEYLSQI----WLENRIDLEELSDNRDF 364

This is the non-catalytic subunit of the N-terminal acetyltransferase B complex (NatB). The NatB complex catalyzes the acetylation of the amino-terminal methionine residue of all proteins beginning with Met-Asp or Met-Glu and of some proteins beginning with Met-Asn or Met-Met. In Saccharomyces cerevisiae this subunit is called MDM20 and in Schizosaccharomyces pombe it is called Arm1. NatB acetylates the Tpm1 protein and regulates and tropomyocin-actin interactions. This subunit is required by the NatB complex for the N-terminal acetylation of Tpm1. Length = 364
>gnl|CDD|222112 pfam13414, TPR_11, TPR repeat Back     alignment and domain information
>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 892
KOG2053932 consensus Mitochondrial inheritance and actin cyto 100.0
PF09797365 NatB_MDM20: N-acetyltransferase B complex (NatB) n 100.0
PF12569517 NARP1: NMDA receptor-regulated protein 1 ; InterPr 99.85
KOG1156700 consensus N-terminal acetyltransferase [Chromatin 99.68
TIGR02917899 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat 97.95
TIGR02917899 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat 97.88
KOG2076895 consensus RNA polymerase III transcription factor 97.42
PRK15174656 Vi polysaccharide export protein VexE; Provisional 97.38
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 97.34
PLN032181060 maturation of RBCL 1; Provisional 97.21
PRK11447 1157 cellulose synthase subunit BcsC; Provisional 97.18
PRK114471157 cellulose synthase subunit BcsC; Provisional 97.13
PLN032181060 maturation of RBCL 1; Provisional 97.12
PRK15174656 Vi polysaccharide export protein VexE; Provisional 97.11
PRK10049765 pgaA outer membrane protein PgaA; Provisional 96.98
PLN03077857 Protein ECB2; Provisional 96.96
TIGR00540409 hemY_coli hemY protein. This is an uncharacterized 96.9
PLN03081697 pentatricopeptide (PPR) repeat-containing protein; 96.73
TIGR00540409 hemY_coli hemY protein. This is an uncharacterized 96.66
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 96.49
PRK11788389 tetratricopeptide repeat protein; Provisional 96.47
PRK14574822 hmsH outer membrane protein; Provisional 96.31
PRK10049765 pgaA outer membrane protein PgaA; Provisional 96.24
PRK10747398 putative protoheme IX biogenesis protein; Provisio 96.17
PF13429280 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 96.13
PRK10747398 putative protoheme IX biogenesis protein; Provisio 95.96
PLN03081697 pentatricopeptide (PPR) repeat-containing protein; 95.79
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 95.6
PLN03077857 Protein ECB2; Provisional 95.52
PF09976145 TPR_21: Tetratricopeptide repeat; InterPro: IPR018 95.45
TIGR02521234 type_IV_pilW type IV pilus biogenesis/stability pr 95.2
PRK11788389 tetratricopeptide repeat protein; Provisional 94.85
PF1343265 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL 94.77
KOG20021018 consensus TPR-containing nuclear phosphoprotein th 94.59
COG3063250 PilF Tfp pilus assembly protein PilF [Cell motilit 94.58
PRK12370553 invasion protein regulator; Provisional 94.28
TIGR02521234 type_IV_pilW type IV pilus biogenesis/stability pr 94.2
PRK15359144 type III secretion system chaperone protein SscB; 93.87
PRK14574822 hmsH outer membrane protein; Provisional 93.83
PF1455968 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN 93.72
KOG0547606 consensus Translocase of outer mitochondrial membr 93.71
PRK12370553 invasion protein regulator; Provisional 93.65
PF1337173 TPR_9: Tetratricopeptide repeat 93.64
KOG3060289 consensus Uncharacterized conserved protein [Funct 93.55
TIGR02552135 LcrH_SycD type III secretion low calcium response 93.38
PF1455968 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN 93.35
PF1289584 Apc3: Anaphase-promoting complex, cyclosome, subun 93.32
COG4783484 Putative Zn-dependent protease, contains TPR repea 93.32
PF09295395 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); Inter 93.29
PF1341469 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A 92.96
PRK09782987 bacteriophage N4 receptor, outer membrane subunit; 92.72
KOG1174564 consensus Anaphase-promoting complex (APC), subuni 92.5
PF1342844 TPR_14: Tetratricopeptide repeat 92.36
PRK14720906 transcript cleavage factor/unknown domain fusion p 92.34
PF13429280 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 92.32
PRK10370198 formate-dependent nitrite reductase complex subuni 91.91
PRK15359144 type III secretion system chaperone protein SscB; 91.82
KOG2076895 consensus RNA polymerase III transcription factor 91.76
KOG4626966 consensus O-linked N-acetylglucosamine transferase 91.27
TIGR02552135 LcrH_SycD type III secretion low calcium response 90.92
KOG1174564 consensus Anaphase-promoting complex (APC), subuni 90.91
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 90.83
PF1343265 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL 90.06
PRK09782987 bacteriophage N4 receptor, outer membrane subunit; 88.92
TIGR02795119 tol_pal_ybgF tol-pal system protein YbgF. Members 87.99
TIGR03302235 OM_YfiO outer membrane assembly lipoprotein YfiO. 87.99
PLN03088356 SGT1, suppressor of G2 allele of SKP1; Provisional 87.91
KOG1126638 consensus DNA-binding cell division cycle control 87.47
PF09295395 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); Inter 87.26
PRK11189296 lipoprotein NlpI; Provisional 87.2
TIGR02795119 tol_pal_ybgF tol-pal system protein YbgF. Members 87.17
PF0771934 TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 86.52
PF1337173 TPR_9: Tetratricopeptide repeat 85.22
cd00189100 TPR Tetratricopeptide repeat domain; typically con 84.22
PF1289584 Apc3: Anaphase-promoting complex, cyclosome, subun 83.61
PF0051534 TPR_1: Tetratricopeptide repeat; InterPro: IPR0014 82.72
PRK11189296 lipoprotein NlpI; Provisional 82.66
PF04733290 Coatomer_E: Coatomer epsilon subunit; InterPro: IP 82.32
PLN03088356 SGT1, suppressor of G2 allele of SKP1; Provisional 82.2
cd00189100 TPR Tetratricopeptide repeat domain; typically con 81.35
cd05804355 StaR_like StaR_like; a well-conserved protein foun 81.1
PLN02789320 farnesyltranstransferase 80.9
PF03704146 BTAD: Bacterial transcriptional activator domain; 80.39
>KOG2053 consensus Mitochondrial inheritance and actin cytoskeleton organization protein [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=1.7e-126  Score=1102.52  Aligned_cols=813  Identities=28%  Similarity=0.353  Sum_probs=735.7

Q ss_pred             chHHHHHHHHHhhhcHHHHHHHHHHhHhhhCCCccHHHHHHHHHHHhhcCCch---hhHHHHHHHHHHHHhhcC-CCCch
Q 002692            2 DHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGG---EKLLLLAEGLLKKHVASH-SLHEP   77 (892)
Q Consensus         2 ELl~~lF~ayvR~~d~kkqQQ~AmkL~K~f~~~rY~fWaVmS~~LQa~~~~~~---~kLL~LA~kmleK~i~~~-~iet~   77 (892)
                      |+++||||+|+|+++|++|||+||+|||.||+++||||+|||++||+..++++   .++++||+||+++++.++ ++++.
T Consensus       111 ell~~lFmayvR~~~yk~qQkaa~~LyK~~pk~~yyfWsV~Slilqs~~~~~~~~~~i~l~LA~~m~~~~l~~~gk~~s~  190 (932)
T KOG2053|consen  111 ELLYHLFMAYVREKSYKKQQKAALQLYKNFPKRAYYFWSVISLILQSIFSENELLDPILLALAEKMVQKLLEKKGKIESE  190 (932)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchHHHHHHHHHHhccCCcccccchhHHHHHHHHHHHhccCCccchH
Confidence            89999999999999999999999999999999999999999999999987653   477999999999999988 89999


Q ss_pred             HHHHHHHHHHHHcCChhHHHHHHhhhcccchhcHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHhh
Q 002692           78 EALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKL-RMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCL  156 (892)
Q Consensus        78 EEl~LY~~ILe~qgK~~EALelL~~~Lg~~l~~~~e~L-~Lka~lL~klg~weea~~~~k~LLe~npDDW~~w~~yLda~  156 (892)
                      +|+.||+.||+.||||+||++++.++++..++.....+ .++.++++++++|.+.++++.++|+.++||   |+-|+++.
T Consensus       191 aE~~Lyl~iL~~~~k~~eal~~l~~~la~~l~~~~~~l~~~~~dllk~l~~w~~l~~l~~~Ll~k~~Dd---y~~~~~sv  267 (932)
T KOG2053|consen  191 AEIILYLLILELQGKYQEALEFLAITLAEKLTSANLYLENKKLDLLKLLNRWQELFELSSRLLEKGNDD---YKIYTDSV  267 (932)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhcChHHHHHHHHHHHHhCCcc---hHHHHHHH
Confidence            99999999999999999999999999998877654443 445599999999999999999999999999   66677776


Q ss_pred             hcC-CCccccCCCCCCCCCCCcccccccCcchhhhhhcHHHHHHHHHHHhhccCCCCCchhHhHhchHHHHHhhhCCCCc
Q 002692          157 LED-DSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNN  235 (892)
Q Consensus       157 ~el-~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~i~ea~~fi~~l~a~~~~~~~Rgp~LA~LEL~~Rl~~~G~~~~  235 (892)
                      +++ ...|.++.+++..                 +...+..+.+++++.+    +.+.||||||+||+.+|...-     
T Consensus       268 ~klLe~~~~~~a~~~~s-----------------~~~~l~~~~ek~~~~i----~~~~Rgp~LA~lel~kr~~~~-----  321 (932)
T KOG2053|consen  268 FKLLELLNKEPAEAAHS-----------------LSKSLDECIEKAQKNI----GSKSRGPYLARLELDKRYKLI-----  321 (932)
T ss_pred             HHHHHhcccccchhhhh-----------------hhhhHHHHHHHHHHhh----cccccCcHHHHHHHHHHhccc-----
Confidence            662 3334544433211                 1224555556655544    347999999999999997443     


Q ss_pred             hHHHHHHHHHHHHcCCCcccHHhHHHHHhhcCHHHHHHHHHHHHhccCCCCchhhhHHHHHHHHHHHHHHhcCccCCChH
Q 002692          236 DELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVD  315 (892)
Q Consensus       236 ~~l~~~l~~Yf~kFg~KpcCF~DLk~Yl~~L~~ee~~~fl~~l~~~~~~~s~~~~k~L~~~In~~Kl~rllg~~~~ls~~  315 (892)
                      ++..+.+..||++||+|||||.|+++|+..++++++..|++.+....+. ++.+.+.++.|+|+.+++|++|.+..+|.+
T Consensus       322 gd~ee~~~~y~~kfg~kpcc~~Dl~~yl~~l~~~q~~~l~~~l~~~~~~-~s~~~k~l~~h~c~l~~~rl~G~~~~l~ad  400 (932)
T KOG2053|consen  322 GDSEEMLSYYFKKFGDKPCCAIDLNHYLGHLNIDQLKSLMSKLVLADDD-SSGDEKVLQQHLCVLLLLRLLGLYEKLPAD  400 (932)
T ss_pred             CChHHHHHHHHHHhCCCcHhHhhHHHhhccCCHHHHHHHHHHhhccCCc-chhhHHHHHHHHHHHHHHHHhhccccCChH
Confidence            4677999999999999999999999999999999999999998764433 446789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCCCCCcccccchHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHhcCCCchHHHHHHH
Q 002692          316 ELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLV  395 (892)
Q Consensus       316 ~~~~~v~~lv~~Y~~~l~l~~~l~~tE~qp~Del~LLAa~~Ll~l~~~~~~~~~Ll~Ai~LLE~aL~kSP~N~~lkLlLi  395 (892)
                      +..+.+++|...|++++.+++++.|||+++||+|+++|++.|+++|++++|..++++||++||+++++||||||+|+||+
T Consensus       401 ~i~a~~~kl~~~ye~gls~~K~ll~TE~~~g~~~llLav~~Lid~~rktnd~~~l~eaI~LLE~glt~s~hnf~~KLlLi  480 (932)
T KOG2053|consen  401 SILAYVRKLKLTYEKGLSLSKDLLPTEYSFGDELLLLAVNHLIDLWRKTNDLTDLFEAITLLENGLTKSPHNFQTKLLLI  480 (932)
T ss_pred             HHHHHHHHHHHHHhccccccccccccccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhhcCCccHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCChHHHHHHHHhCCchhHHHHhhhhhhhhhhhcccchhhhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCChhhH
Q 002692          396 HLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKV  475 (892)
Q Consensus       396 rLY~~LGa~s~A~~~y~~LdIK~IQ~DTLghlil~rlst~p~~~~~~~ll~~~lrfy~~s~ke~~d~I~~Afe~GsYSKI  475 (892)
                      |||++|||++.|.++|..|||||||+|||||++++++.++|.+..+.+.++.+++||+++.+|++|+|..||++|+||||
T Consensus       481 riY~~lGa~p~a~~~y~tLdIK~IQ~DTlgh~~~~~~~t~g~~~~~s~~~~~~lkfy~~~~kE~~eyI~~AYr~g~ySkI  560 (932)
T KOG2053|consen  481 RIYSYLGAFPDAYELYKTLDIKNIQTDTLGHLIFRRAETSGRSSFASNTFNEHLKFYDSSLKETPEYIALAYRRGAYSKI  560 (932)
T ss_pred             HHHHHhcCChhHHHHHHhcchHHhhhccchHHHHHHHHhcccchhHHHHHHHHHHHHhhhhhhhHHHHHHHHHcCchhhh
Confidence            99999999999999999999999999999999999999999888889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCCchhhHHHHHhhhcccccccccccccCCCCccccccccCCCCCCCCCC
Q 002692          476 IEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPD  555 (892)
Q Consensus       476 ~EfieF~eRL~~Sl~r~~~~vE~~rl~L~~~~~~~~e~~~~l~~L~~~~~~~~l~~ei~~~~LsDNRDf~vfp~w~p~~~  555 (892)
                      +||+.|++||.+|.|++.+.||+++++++.+.++.++....++    +++....++.|+|.+|+|||||++||+|+|.+.
T Consensus       561 ~em~~fr~rL~~S~q~~a~~VE~~~l~ll~~~~~~~q~~~~~~----~~~l~~~e~~I~w~~L~DNRDl~~~~~w~p~~e  636 (932)
T KOG2053|consen  561 PEMLAFRDRLMHSLQKWACRVENLQLSLLCNADRGTQLLKLLE----SMKLPPSEDRIQWVSLSDNRDLNAIPYWDPEDE  636 (932)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHh----ccccCcchhhcccccccccccccccccCCCcch
Confidence            9999999999999999999999999999999988877555555    344555677799999999999999999999988


Q ss_pred             CCCCCCCccccccc-cchhhhHHHhhhHHHHHHhhhhhhHHHHHHhhccccccchhccccCcccCchhhhhHHHHHHHHH
Q 002692          556 KNYLLGPFAGISYC-PKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYA  634 (892)
Q Consensus       556 ~~~~l~p~~~~~~~-p~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  634 (892)
                      +         ..+| |||..++|++-+..+.+.+| |+|++|+++.++....+.+.+|.++   +..+..|++.++++|.
T Consensus       637 ~---------~~~e~~k~s~kEe~~~l~~rSi~lr-Ll~~~i~l~h~~~~k~~~~salt~~---~mevl~el~~ll~~~t  703 (932)
T KOG2053|consen  637 N---------FAEELKKESFKEETEWLNLRSIFLR-LLRELIILAHPNGEKDLEKSALTAK---VMEVLRELELLLEQYT  703 (932)
T ss_pred             h---------hHHhhhhcChHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcchHHHHHhcc---chHHHHHHHHHHHHHH
Confidence            5         3445 77889999999998899999 9999999999999999999999888   8999999999999999


Q ss_pred             HHhCcchhhhhHHHhhcccCccchhhhchhhhhHHHHHHHHHhhccCcccccccCCCCCCcchHHHHHHHHHHHHHHhhc
Q 002692          635 KMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRS  714 (892)
Q Consensus       635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  714 (892)
                      +++|+|..++|++.+-.+.|++...-+++        ++|++||++..++.            |++-.++++.|.  +++
T Consensus       704 ~~~~~~~~~liq~~~~~~~~~r~g~l~~s--------~~f~~~~~~lv~~~------------~~~s~~l~e~~~--v~t  761 (932)
T KOG2053|consen  704 SVLIPSASFLIQFPLLESQGVRLGDLLNS--------LEFLMAVPLLVKDL------------WSVSHPLLELTK--VRT  761 (932)
T ss_pred             HhhhhhhHHhhhhhhhccccccccchhhh--------HHHHHHHHHHHHHH------------HhccchHHHHHH--HHH
Confidence            99999999999999999999997765555        99999999998876            999999999998  444


Q ss_pred             CCcc-ccccCccHHHHHHHhccchhHHHHHHHHHHhhcCCCCcccccCCCCC-CCCCcchhhHHhhHHhhhhHHHHHHHH
Q 002692          715 MESL-VCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSAD-HSTSPLSHDIRGSVQSTSGVVEEVAKW  792 (892)
Q Consensus       715 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  792 (892)
                      +..- +.++-.++++.||-.++|+.||-..+++|.+..+|++++++|...++ +..|++++|+.++|+-.|  .+.+..|
T Consensus       762 ~i~t~l~s~~~~~~~~~q~~~~~~~w~~~~~~~k~~~sl~~~~~~l~~i~s~~L~~s~~~~av~~pvk~~~--~kk~~~~  839 (932)
T KOG2053|consen  762 EIITDLISLLRIKDKEVQKEKLPLLWIVDGKLIKALQSLLSLYVFLKNIFSDKLKVSSVPTAVKEPVKLKG--DKKASVQ  839 (932)
T ss_pred             HHHHHHHHHHHHHHHHhhhccCCchhhhhHHHHhhHHHHHHHHHHHHHHHhhhhccccccccccchhhhhh--hhHHHHH
Confidence            4333 45566789999999999999999999999999999999999999999 777899999999999999  8999999


Q ss_pred             HHhhhCCChhHHHHHHHHHHHhcCCCCCCchhHHhhhhhhhccchhhhhhhhhhhccCCChHHHHHHhhhhhhhHHHHHH
Q 002692          793 LGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFL  872 (892)
Q Consensus       793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  872 (892)
                      .-.++++||+.++..-+....+.+...+||+|..+++.+|+.-.+++.|.+|++++++ .++||.++.+..+..+++||+
T Consensus       840 ~~t~~~~~e~~~~~~el~~~~~~~~~n~~~~i~g~~~~~lal~~E~~ids~i~~~l~~-~~~d~~~k~~~~~~~~~~e~~  918 (932)
T KOG2053|consen  840 AYTKLKKPECGQVLQELDRKLAENLSNIKNSILGYLKSFLALELESMIDSSIGPELEG-AKADVEGKHNPSASRLLREFL  918 (932)
T ss_pred             HHHhhcchHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHhhhhhhccccccchhhhh-hhHhHhhhcchHHHHHHHHHH
Confidence            9999999999999999988888888889999999999999999999999999999999 999999999999999999999


Q ss_pred             HHhHHHHHHHHHHH
Q 002692          873 RICESKIKSLQALK  886 (892)
Q Consensus       873 ~~~~~~~~~~~~~~  886 (892)
                      ++|++|++..+.++
T Consensus       919 ~l~e~k~~~~~~lk  932 (932)
T KOG2053|consen  919 NLCEDKHTTIKKLK  932 (932)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999987653

>PF09797 NatB_MDM20: N-acetyltransferase B complex (NatB) non catalytic subunit; InterPro: IPR019183 This is the non-catalytic subunit of the N-terminal acetyltransferase B complex (NatB) Back     alignment and domain information
>PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala Back     alignment and domain information
>KOG1156 consensus N-terminal acetyltransferase [Chromatin structure and dynamics] Back     alignment and domain information
>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein Back     alignment and domain information
>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein Back     alignment and domain information
>KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] Back     alignment and domain information
>PRK15174 Vi polysaccharide export protein VexE; Provisional Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PLN03218 maturation of RBCL 1; Provisional Back     alignment and domain information
>PRK11447 cellulose synthase subunit BcsC; Provisional Back     alignment and domain information
>PRK11447 cellulose synthase subunit BcsC; Provisional Back     alignment and domain information
>PLN03218 maturation of RBCL 1; Provisional Back     alignment and domain information
>PRK15174 Vi polysaccharide export protein VexE; Provisional Back     alignment and domain information
>PRK10049 pgaA outer membrane protein PgaA; Provisional Back     alignment and domain information
>PLN03077 Protein ECB2; Provisional Back     alignment and domain information
>TIGR00540 hemY_coli hemY protein Back     alignment and domain information
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional Back     alignment and domain information
>TIGR00540 hemY_coli hemY protein Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PRK11788 tetratricopeptide repeat protein; Provisional Back     alignment and domain information
>PRK14574 hmsH outer membrane protein; Provisional Back     alignment and domain information
>PRK10049 pgaA outer membrane protein PgaA; Provisional Back     alignment and domain information
>PRK10747 putative protoheme IX biogenesis protein; Provisional Back     alignment and domain information
>PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B Back     alignment and domain information
>PRK10747 putative protoheme IX biogenesis protein; Provisional Back     alignment and domain information
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PLN03077 Protein ECB2; Provisional Back     alignment and domain information
>PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function Back     alignment and domain information
>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW Back     alignment and domain information
>PRK11788 tetratricopeptide repeat protein; Provisional Back     alignment and domain information
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B Back     alignment and domain information
>KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK12370 invasion protein regulator; Provisional Back     alignment and domain information
>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW Back     alignment and domain information
>PRK15359 type III secretion system chaperone protein SscB; Provisional Back     alignment and domain information
>PRK14574 hmsH outer membrane protein; Provisional Back     alignment and domain information
>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A Back     alignment and domain information
>KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK12370 invasion protein regulator; Provisional Back     alignment and domain information
>PF13371 TPR_9: Tetratricopeptide repeat Back     alignment and domain information
>KOG3060 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD Back     alignment and domain information
>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A Back     alignment and domain information
>PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A Back     alignment and domain information
>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] Back     alignment and domain information
>PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi Back     alignment and domain information
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A Back     alignment and domain information
>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional Back     alignment and domain information
>KOG1174 consensus Anaphase-promoting complex (APC), subunit 7 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13428 TPR_14: Tetratricopeptide repeat Back     alignment and domain information
>PRK14720 transcript cleavage factor/unknown domain fusion protein; Provisional Back     alignment and domain information
>PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B Back     alignment and domain information
>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional Back     alignment and domain information
>PRK15359 type III secretion system chaperone protein SscB; Provisional Back     alignment and domain information
>KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] Back     alignment and domain information
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD Back     alignment and domain information
>KOG1174 consensus Anaphase-promoting complex (APC), subunit 7 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B Back     alignment and domain information
>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional Back     alignment and domain information
>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF Back     alignment and domain information
>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO Back     alignment and domain information
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional Back     alignment and domain information
>KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi Back     alignment and domain information
>PRK11189 lipoprotein NlpI; Provisional Back     alignment and domain information
>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF Back     alignment and domain information
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>PF13371 TPR_9: Tetratricopeptide repeat Back     alignment and domain information
>cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C Back     alignment and domain information
>PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A Back     alignment and domain information
>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>PRK11189 lipoprotein NlpI; Provisional Back     alignment and domain information
>PF04733 Coatomer_E: Coatomer epsilon subunit; InterPro: IPR006822 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional Back     alignment and domain information
>cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C Back     alignment and domain information
>cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals Back     alignment and domain information
>PLN02789 farnesyltranstransferase Back     alignment and domain information
>PF03704 BTAD: Bacterial transcriptional activator domain; InterPro: IPR005158 Found in the DNRI/REDD/AFSR family of regulators, this region of AFSR (P25941 from SWISSPROT) along with the C-terminal region is capable of independently directing actinorhodin production Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query892
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-10
2r5s_A176 Uncharacterized protein VP0806; APC090868.1, vibri 3e-05
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 9e-05
1w3b_A388 UDP-N-acetylglucosamine--peptide N-acetylglucosami 2e-04
3urz_A208 Uncharacterized protein; tetratricopeptide repeats 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 74.9 bits (183), Expect = 8e-14
 Identities = 89/569 (15%), Positives = 171/569 (30%), Gaps = 162/569 (28%)

Query: 377 LEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALD-VKNILMETVSHHIL--PQML 433
           ++F     ++  QYK +L        A    ++     D  K+IL +    HI+     +
Sbjct: 7   MDFETGEHQY--QYKDILSVF---EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 434 VSS---LWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSK-----VIEFVQFKERL 485
             +    W   +       +F+++ LR   +  FL    +   +        +++ ++RL
Sbjct: 62  SGTLRLFWTLLSKQEEMVQKFVEEVLRI--NYKFLMSPIKTEQRQPSMMTRMYIEQRDRL 119

Query: 486 QRSSQ----YLVARVESSILQLKQNANNIEEEE------------SVL-------ENLKC 522
              +Q    Y V+R++   L+L+Q    +   +            + +         ++C
Sbjct: 120 YNDNQVFAKYNVSRLQP-YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178

Query: 523 GVDF----LELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKER 578
            +DF    L L N    ++V   E  Q         D N+        +   + + ++  
Sbjct: 179 KMDFKIFWLNLKNCNSPETVL--EMLQKL---LYQIDPNWTSRSDHSSNIKLRIHSIQAE 233

Query: 579 EANILGVVERKSLLPR-LIYLS-IQTASACVKENFEVNGSIC-------DPKVSSELKYL 629
              +L    +       L+ L  +Q A       F ++   C         +V+  L   
Sbjct: 234 LRRLL----KSKPYENCLLVLLNVQNAK--AWNAFNLS---CKILLTTRFKQVTDFLSAA 284

Query: 630 LDRYAKM----LGFSLRDAVEVVS---GVSSGLNSSEA----------FGA---DMVG-W 668
              +  +    +  +  +   ++             E                 D +  W
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344

Query: 669 LNF------------AVFLNAWNLSSHE--------VVLP-DVN---GCRHSTW------ 698
            N+               LN   L   E         V P   +         W      
Sbjct: 345 DNWKHVNCDKLTTIIESSLN--VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS 402

Query: 699 ---QVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWH-TLVMQSCVRSSLPS 754
               VVN L K  ++E +  ES +  P + L + V+L  E  A H ++V    +  +  S
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY-ALHRSIVDHYNIPKTFDS 461

Query: 755 GKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSS--- 811
                          P   D            +     +GHH+K  E  +   +F     
Sbjct: 462 -----------DDLIPPYLD------------QYFYSHIGHHLKNIEHPERMTLFRMVFL 498

Query: 812 ----LEANGRGEG-----PGQVFRLLGTL 831
               LE   R +       G +   L  L
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTLQQL 527
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} Length = 176 Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 Back     alignment and structure
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 Back     alignment and structure
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} Length = 208 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 892
d1w3ba_388 a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, 2e-04
d1w3ba_388 a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, 0.001
d1w3ba_388 a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, 0.003
d2c2la1201 a.118.8.1 (A:24-224) STIP1 homology and U box-cont 0.002
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: O-GlcNAc transferase p110 subunit, OGT
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 2/90 (2%)

Query: 77  PEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYK 136
            +A I   ++L++   +  A+        SL             +   QG    A   Y+
Sbjct: 203 LDAYINLGNVLKEARIFDRAVAAYL-RALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYR 261

Query: 137 KILELSPDDWECFLHYLGCLLEDDSSWCNA 166
           + +EL P   +     L   L++  S   A
Sbjct: 262 RAIELQPHFPDA-YCNLANALKEKGSVAEA 290
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 Back     information, alignment and structure
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 Back     information, alignment and structure
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query892
d1w3ba_388 O-GlcNAc transferase p110 subunit, OGT {Human (Hom 97.09
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 96.33
d2h6fa1315 Protein farnesyltransferase alpha-subunit {Human ( 95.9
d1w3ba_388 O-GlcNAc transferase p110 subunit, OGT {Human (Hom 95.83
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 95.74
d1a17a_159 Protein phosphatase 5 {Human (Homo sapiens) [TaxId 95.15
d2c2la1201 STIP1 homology and U box-containing protein 1, STU 94.72
d1elwa_117 Hop {Human (Homo sapiens) [TaxId: 9606]} 94.16
d1elwa_117 Hop {Human (Homo sapiens) [TaxId: 9606]} 92.2
d1xnfa_259 Lipoprotein NlpI {Escherichia coli [TaxId: 562]} 92.18
d1a17a_159 Protein phosphatase 5 {Human (Homo sapiens) [TaxId 91.92
d1hxia_112 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 91.57
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 88.72
d2h6fa1315 Protein farnesyltransferase alpha-subunit {Human ( 88.71
d1p5qa1170 FKBP52 (FKBP4), C-terminal domain {Human (Homo sap 85.73
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: O-GlcNAc transferase p110 subunit, OGT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.0084  Score=34.14  Aligned_cols=95  Identities=16%  Similarity=0.204  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             99999988530899856899999999998199668999884100440100899999999999984999999999999997
Q 002692           61 AEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILE  140 (892)
Q Consensus        61 A~kmleK~i~~~~iet~EEl~LY~~ILe~qgK~eEALelL~~~Lg~~l~~~~~~L~Lka~lL~klg~weea~~~~k~LLe  140 (892)
                      |.+..+++++..| ..++-+.....++..+|++++|++.+..-+. .-+...+-+...+.++.+.|+++++...+...+.
T Consensus        18 A~~~~~~~l~~~p-~~~~~~~~la~~~~~~~~~~~A~~~~~~al~-~~p~~~~a~~~l~~~~~~~g~~~~A~~~~~~~~~   95 (388)
T d1w3ba_          18 AERHCMQLWRQEP-DNTGVLLLLSSIHFQCRRLDRSAHFSTLAIK-QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR   95 (388)
T ss_dssp             HHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCC-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             9999999998689-9899999999999986999999999999998-5999899999999996420002222222221211


Q ss_pred             HCCCCHHHHHHHHHHHH
Q ss_conf             49999799999997020
Q 002692          141 LSPDDWECFLHYLGCLL  157 (892)
Q Consensus       141 ~n~DDW~~w~~yLda~~  157 (892)
                      .++.+...+........
T Consensus        96 ~~~~~~~~~~~~~~~~~  112 (388)
T d1w3ba_          96 LKPDFIDGYINLAAALV  112 (388)
T ss_dssp             HCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCC
T ss_conf             22222222222222222
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure