Citrus Sinensis ID: 002698

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-

MAARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIKLKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVCGANHWSDFRKVIIVISKLRYKT

cccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHccccHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccccEEEcccccHHHHHHHHHHHHHcccccccccccccccHHHHHcHHHHHHHHHccHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccHHHHHcccccccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccc

ccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHccccHHHHHHHHHHHHHHHHHcccccEcccHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccHHHHcHHEEHccccHHHHHHHHHHHHHccccccccEcccHccHHHHHHHHHHHHHHHccHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHccccccccccEEEEcccHEEEEccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHHccc

MAARNLEKMASIDAQLRLLapakvseddklVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAeyegkrdsqKLEELGNvltsldpgdsivvTKSFSHMLNLANLAEEVQIAYRRRIKlkkgdfvdensatteSDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTqlyakditpddKQELDEALQREIQAAFrtdeirrspptpqdemragmsyFHETIWKGVPKFLRRVDTALKniginervpynapliqfsswmggdrdgnprvtsevTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWkqippnepyrvILGDVRDKLYNTRERARQLLANgisdipediaYTHVEQFLEPLELCYRSlcacgdrpiadgsLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELrgkrplfgsdlpkteeIADVLDTFHviselpadsfgAYIISMATAPSDVLAVELLQRecrvkqplrvvplFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMigysdsgkdaGRLSAAWQLYKTQEELVKVAKQYGVKLTmfhgrggtvgrgggpthlailsqppdtihgslrvTVQGEVIEQSFGEEHLCFRTLQRFSAAtlehgmhppvspkpeWRALMDEMAVIATKEYRsivfqeprfveyfrlatpemeygrmnigsrpskrkpsggieslrAIPWIFAwtqtrfhlpvwlgFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVCGANHWSDFRKVIIVISKLRYKT

MAARNLEKMASIDAQLRLlapakvseddKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAeyegkrdsqkLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIklkkgdfvdensattesdieeTLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTqlyakditpddKQELDEALQREIQaafrtdeirrspptpqdemrAGMSYFHETIWKGVPKFLRRVDTALKniginervpynAPLIQFSSwmggdrdgnprvTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEfwkqippnepyrvILGDVRDKLYNTRERARQLLangisdipeDIAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDirqeserhtdviDAITKhlgigsyrewsEEKRQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAAtlehgmhppvspkpEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEmeygrmnigsrpskrkpsggiESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVCganhwsdfrKVIIVISKLRYKT

MAARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIKLKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHgrggtvgrgggPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVCGANHWSDFRKVIIVISKLRYKT

***************LRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEY***********LGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIKLKKGDFV*************TLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDI***************************************MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGL******DAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHG*********EWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEY******************ESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVCGANHWSDFRKVIIVISKLR***

*******************************EYDALLLDRFLDILQDLHGEDIRETVQECYEL*****************NVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRR******************SDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLAN**SDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHG**********WRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIG***************RAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVCGANHWSDFRKVIIVISKLRY**

********MASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIKLKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIG**********GIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVCGANHWSDFRKVIIVISKLRYKT

*********ASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIKLKK**********TESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPS*****GGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVCGANHWSDFRKVIIVISKLR***

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		891	2.2.26 [Sep-21-2011]
Q5GM68		963	Phosphoenolpyruvate carbo	yes	no	0.974	0.901	0.896	0.0
Q9FV65		967	Phosphoenolpyruvate carbo	N/A	no	0.976	0.899	0.895	0.0
P16097		960	Phosphoenolpyruvate carbo	N/A	no	0.967	0.897	0.899	0.0
Q02909		967	Phosphoenolpyruvate carbo	no	no	0.976	0.899	0.885	0.0
P29193		966	Phosphoenolpyruvate carbo	N/A	no	0.976	0.900	0.884	0.0
Q9MAH0		967	Phosphoenolpyruvate carbo	no	no	0.976	0.899	0.884	0.0
Q84VW9		968	Phosphoenolpyruvate carbo	no	no	0.976	0.898	0.883	0.0
P29194		960	Phosphoenolpyruvate carbo	N/A	no	0.970	0.901	0.887	0.0
P27154		964	Phosphoenolpyruvate carbo	N/A	no	0.976	0.902	0.883	0.0
P51059		967	Phosphoenolpyruvate carbo	N/A	no	0.970	0.894	0.882	0.0

>sp\|Q5GM68\|CAPP2_ARATH Phosphoenolpyruvate carboxylase 2 OS=Arabidopsis thaliana GN=PPC2 PE=1 SV=2	Back alignment and function desciption

 Score = 1605 bits (4156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 781/871 (89%), Positives = 832/871 (95%), Gaps = 3/871 (0%)

Query: 1   MAARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQEC 60
           MAARNLEKMASIDAQLRLLAP KVSEDDKL+EYDALLLDRFLDILQDLHGED+RE VQEC
Sbjct: 1   MAARNLEKMASIDAQLRLLAPGKVSEDDKLIEYDALLLDRFLDILQDLHGEDVREFVQEC 60

Query: 61  YELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK 120
           YE++A+Y+G R+++KLEELGN+LTSLDPGDSIVVTKSFS+ML+LANLAEEVQIAYRRRIK
Sbjct: 61  YEVAADYDGNRNTEKLEELGNMLTSLDPGDSIVVTKSFSNMLSLANLAEEVQIAYRRRIK 120

Query: 121 -LKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRR 179
            LKKGDF DE SATTESDIEETLKRL+ QL K+PEEVFDALKNQTVDLV TAHPTQSVRR
Sbjct: 121 KLKKGDFADEASATTESDIEETLKRLL-QLNKTPEEVFDALKNQTVDLVLTAHPTQSVRR 179

Query: 180 SLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAG 239
           SLLQK GRIR+CLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRR+PPTPQDEMRAG
Sbjct: 180 SLLQKFGRIRDCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAG 239

Query: 240 MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVT 299
           MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVT EVT
Sbjct: 240 MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVT 299

Query: 300 RDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQI 359
           RDVCLLARMMAANLYFSQIEDLMFE+SMWRCN+ELR RA+   R +KRDAKHYIEFWKQI
Sbjct: 300 RDVCLLARMMAANLYFSQIEDLMFEMSMWRCNEELRVRAER-QRCAKRDAKHYIEFWKQI 358

Query: 360 PPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCA 419
           P NEPYR ILGDVRDKLYNTRERARQLL++G+SD+PED  +T V+QFLEPLELCYRSLC 
Sbjct: 359 PANEPYRAILGDVRDKLYNTRERARQLLSSGVSDVPEDAVFTSVDQFLEPLELCYRSLCD 418

Query: 420 CGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEK 479
           CGDRPIADGSLLDFLRQVSTFGL+LV+LDIRQESERH+DV+DAIT HLGIGSY+EWSE+K
Sbjct: 419 CGDRPIADGSLLDFLRQVSTFGLALVKLDIRQESERHSDVLDAITTHLGIGSYKEWSEDK 478

Query: 480 RQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLA 539
           RQEWLLSEL GKRPLFG DLPKTEE+ADVLDTF VISELP+DSFGAYIISMATAPSDVLA
Sbjct: 479 RQEWLLSELSGKRPLFGPDLPKTEEVADVLDTFKVISELPSDSFGAYIISMATAPSDVLA 538

Query: 540 VELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSG 599
           VELLQREC +  PLRVVPLFEKLADLE+APA+VARLFSI+WYRNRI+GKQEVMIGYSDSG
Sbjct: 539 VELLQRECGITDPLRVVPLFEKLADLESAPAAVARLFSIEWYRNRINGKQEVMIGYSDSG 598

Query: 600 KDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH 659
           KDAGRLSAAWQLYKTQEELVKVAK+YGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH
Sbjct: 599 KDAGRLSAAWQLYKTQEELVKVAKEYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH 658

Query: 660 GSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIAT 719
           G LRVTVQGEVIEQSFGEEHLCFRTLQRF+AATLEHGMHPPVSPKPEWR LMDEMA+IAT
Sbjct: 659 GQLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRVLMDEMAIIAT 718

Query: 720 KEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 779
           +EYRS+VF+EPRFVEYFRLATPE+EYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR
Sbjct: 719 EEYRSVVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 778

Query: 780 FHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYD 839
           FHLPVWLGFG AFK VIQKD KNL+ML+EMYN WPFFRVTIDLVEMVFAKGDPGIAALYD
Sbjct: 779 FHLPVWLGFGGAFKRVIQKDSKNLNMLKEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYD 838

Query: 840 KLLVSEELQPFGEKLRANYAETKSLLLQVCG 870
           +LLVSEELQPFGE+LR NY ET+ LLLQV G
Sbjct: 839 RLLVSEELQPFGEQLRVNYQETRRLLLQVAG 869

Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 1

>sp\|Q9FV65\|CAPPC_FLATR Phosphoenolpyruvate carboxylase 2 OS=Flaveria trinervia GN=PPCC PE=1 SV=1	Back alignment and function description

>sp\|P16097\|CAPP2_MESCR Phosphoenolpyruvate carboxylase 2 OS=Mesembryanthemum crystallinum GN=PPC2 PE=3 SV=1	Back alignment and function description

>sp\|Q02909\|CAPP1_SOYBN Phosphoenolpyruvate carboxylase, housekeeping isozyme OS=Glycine max GN=PPC16 PE=2 SV=1	Back alignment and function description

>sp\|P29193\|CAPP1_SACHY Phosphoenolpyruvate carboxylase, housekeeping isozyme OS=Saccharum hybrid PE=3 SV=1	Back alignment and function description

>sp\|Q9MAH0\|CAPP1_ARATH Phosphoenolpyruvate carboxylase 1 OS=Arabidopsis thaliana GN=PPC1 PE=1 SV=1	Back alignment and function description

>sp\|Q84VW9\|CAPP3_ARATH Phosphoenolpyruvate carboxylase 3 OS=Arabidopsis thaliana GN=PPC3 PE=2 SV=2	Back alignment and function description

>sp\|P29194\|CAPP2_SORBI Phosphoenolpyruvate carboxylase 2 OS=Sorghum bicolor PE=3 SV=1	Back alignment and function description

>sp\|P27154\|CAPP_TOBAC Phosphoenolpyruvate carboxylase OS=Nicotiana tabacum GN=PPC PE=2 SV=1	Back alignment and function description

>sp\|P51059\|CAPP2_MAIZE Phosphoenolpyruvate carboxylase 2 OS=Zea mays GN=PEP4 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		891
255553993		965	Phosphoenolpyruvate carboxylase, putativ	0.976	0.901	0.939	0.0
149789414		965	phosphoenolpyruvate carboxylase [Ricinus	0.976	0.901	0.935	0.0
155967407		965	phosphoenolpyruvate carboxylase [Jatroph	0.976	0.901	0.928	0.0
2266947		965	phosphoenolpyruvate carboxylase 1 [Gossy	0.976	0.901	0.931	0.0
259506726		967	phosphoenolpyruvate carboxylase [Citrus	0.975	0.898	0.924	0.0
302142900		930	unnamed protein product [Vitis vinifera]	0.976	0.935	0.913	0.0
225461660		963	PREDICTED: phosphoenolpyruvate carboxyla	0.976	0.903	0.913	0.0
225446609		965	PREDICTED: phosphoenolpyruvate carboxyla	0.976	0.901	0.916	0.0
224114804		966	predicted protein [Populus trichocarpa]	0.973	0.897	0.911	0.0
302143423		944	unnamed protein product [Vitis vinifera]	0.976	0.921	0.916	0.0

>gi\|255553993\|ref\|XP_002518037.1\| Phosphoenolpyruvate carboxylase, putative [Ricinus communis] gi\|223543019\|gb\|EEF44555.1\| Phosphoenolpyruvate carboxylase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1674 bits (4336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 817/870 (93%), Positives = 844/870 (97%)

Query: 1   MAARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQEC 60
           MA RNLEKMASIDAQLRLLAP KVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQ+C
Sbjct: 1   MAGRNLEKMASIDAQLRLLAPRKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQDC 60

Query: 61  YELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK 120
           YELSAEYEGK + QKL ELG VLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK
Sbjct: 61  YELSAEYEGKHNPQKLAELGKVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK 120

Query: 121 LKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRS 180
           LKKGDF DENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLV TAHPTQSVRRS
Sbjct: 121 LKKGDFADENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVLTAHPTQSVRRS 180

Query: 181 LLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGM 240
           LLQKH RIR+CLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRR+PPTPQDEMRAGM
Sbjct: 181 LLQKHARIRDCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGM 240

Query: 241 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTR 300
           SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVT EVTR
Sbjct: 241 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTR 300

Query: 301 DVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQIP 360
           DVCLLARMMAANLYFSQIEDLMFELSMWRCN+ELR RAD LHR+S++DAKHYIEFWKQIP
Sbjct: 301 DVCLLARMMAANLYFSQIEDLMFELSMWRCNEELRVRADELHRTSRKDAKHYIEFWKQIP 360

Query: 361 PNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCAC 420
           P+EPYRVILGDVRDKLYNTRER+RQLLANGISDIPE+  +T+VEQFLEPLELCYRSLCAC
Sbjct: 361 PSEPYRVILGDVRDKLYNTRERSRQLLANGISDIPEEATFTNVEQFLEPLELCYRSLCAC 420

Query: 421 GDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKR 480
           GDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDV+DAITKHLGIG YREWSEE R
Sbjct: 421 GDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVLDAITKHLGIGFYREWSEEHR 480

Query: 481 QEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAV 540
           QEWLL+ELRGKRPLFG DLPKT+EIADVLDTFHVI+ELPAD+FGAYIISMATAPSDVLAV
Sbjct: 481 QEWLLTELRGKRPLFGPDLPKTDEIADVLDTFHVIAELPADNFGAYIISMATAPSDVLAV 540

Query: 541 ELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGK 600
           ELLQRECRVKQPLRVVPLFEKLADLEAAPA+VARLFSIDWYRNRI+GKQEVMIGYSDSGK
Sbjct: 541 ELLQRECRVKQPLRVVPLFEKLADLEAAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGK 600

Query: 601 DAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHG 660
           DAGRLSAAWQLYK QEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHG
Sbjct: 601 DAGRLSAAWQLYKAQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHG 660

Query: 661 SLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATK 720
           SLRVTVQGEVIEQSFGEEHLCFRTLQRF+AATLEHGMHPPVSPKPEWR L+DEMAVIATK
Sbjct: 661 SLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRTLLDEMAVIATK 720

Query: 721 EYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRF 780
           EYRSIVFQEPRFVEYFRLATPE+EYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRF
Sbjct: 721 EYRSIVFQEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRF 780

Query: 781 HLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDK 840
           HLPVWLGFG AFKHVI+KD++NLHMLQEMYN WPFFRVTIDLVEMVFAKGDPGIAALYDK
Sbjct: 781 HLPVWLGFGPAFKHVIEKDVRNLHMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYDK 840

Query: 841 LLVSEELQPFGEKLRANYAETKSLLLQVCG 870
           LLVSEEL PFGE+LR NY ETK LLLQV G
Sbjct: 841 LLVSEELWPFGERLRVNYEETKHLLLQVAG 870

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|149789414\|gb\|ABR29878.1\| phosphoenolpyruvate carboxylase [Ricinus communis]	Back alignment and taxonomy information

>gi\|155967407\|gb\|ABU41519.1\| phosphoenolpyruvate carboxylase [Jatropha curcas]	Back alignment and taxonomy information

>gi\|2266947\|gb\|AAB80714.1\| phosphoenolpyruvate carboxylase 1 [Gossypium hirsutum]	Back alignment and taxonomy information

>gi\|259506726\|gb\|ABK54024.2\| phosphoenolpyruvate carboxylase [Citrus sinensis]	Back alignment and taxonomy information

>gi\|302142900\|emb\|CBI20195.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225461660\|ref\|XP_002285441.1\| PREDICTED: phosphoenolpyruvate carboxylase, housekeeping isozyme isoform 1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225446609\|ref\|XP_002280569.1\| PREDICTED: phosphoenolpyruvate carboxylase, housekeeping isozyme isoform 1 [Vitis vinifera] gi\|147770696\|emb\|CAN77927.1\| hypothetical protein VITISV_018739 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224114804\|ref\|XP_002316861.1\| predicted protein [Populus trichocarpa] gi\|222859926\|gb\|EEE97473.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|302143423\|emb\|CBI21984.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		891
UNIPROTKB\|Q9FV65		967	PPCC "Phosphoenolpyruvate carb	0.976	0.899	0.882	0.0
TAIR\|locus:2041529		963	PPC2 "phosphoenolpyruvate carb	0.974	0.901	0.884	0.0
TAIR\|locus:2009600		967	PPC1 "phosphoenolpyruvate carb	0.976	0.899	0.871	0.0
TAIR\|locus:2086315		968	PPC3 "phosphoenolpyruvate carb	0.976	0.898	0.870	0.0
UNIPROTKB\|Q9FV66		965	PPCB "Phosphoenolpyruvate carb	0.976	0.901	0.867	0.0
UNIPROTKB\|P30694		966	PPCA "C4 phosphoenolpyruvate c	0.976	0.900	0.834	0.0
TAIR\|locus:2012448		1032	PPC4 "phosphoenolpyruvate carb	0.586	0.506	0.477	8.4e-175
UNIPROTKB\|P00864		883	ppc "Ppc" [Escherichia coli K-	0.570	0.575	0.463	1.5e-162
DICTYBASE\|DDB_G0287723		931	DDB_G0287723 "Phosphoenolpyruv	0.921	0.881	0.388	1.9e-161
TIGR_CMR\|SO_0274		881	SO_0274 "phosphoenolpyruvate c	0.551	0.557	0.468	9.6e-161

UNIPROTKB\|Q9FV65 PPCC "Phosphoenolpyruvate carboxylase 2" [Flaveria trinervia (taxid:4227)]	Back alignment and assigned GO terms

 Score = 4031 (1424.0 bits), Expect = 0., P = 0.
 Identities = 769/871 (88%), Positives = 816/871 (93%)

Query:     1 MAARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQEC 60
             MA RNLEK+ASIDAQLRLL P KVSEDDKL+EYDALLLD+FLDILQDLHGE ++ETVQEC
Sbjct:     1 MANRNLEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEGLKETVQEC 60

Query:    61 YELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK 120
             YELSAEYEGK D +KLEELGNVLTSLDPGDSIV+ K+FSHMLNLANLAEEVQIAYRRRIK
Sbjct:    61 YELSAEYEGKHDPKKLEELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIK 120

Query:   121 LKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRS 180
             LKKGDF DE SATTESDIEET K+LV +LKKSPEEVFDALKNQTVDLVFTAHPTQSVRRS
Sbjct:   121 LKKGDFADEASATTESDIEETFKKLVHKLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRS 180

Query:   181 LLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGM 240
             LLQKHGRIR+CL QLYAKDITPDDKQELDEAL REIQAAFRTDEIRR+PPTPQDEMRAGM
Sbjct:   181 LLQKHGRIRDCLAQLYAKDITPDDKQELDEALHREIQAAFRTDEIRRTPPTPQDEMRAGM 240

Query:   241 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTR 300
             SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVT EVTR
Sbjct:   241 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTR 300

Query:   301 DVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSS-KRDAKHYIEFWKQI 359
             DVCLLARMMAAN+YFSQIEDLMFE+SMWRC+DELR RA+ LHRSS KRD KHYIEFWKQ+
Sbjct:   301 DVCLLARMMAANMYFSQIEDLMFEMSMWRCSDELRVRAEELHRSSSKRDVKHYIEFWKQV 360

Query:   360 PPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCA 419
             PP EPYRVILGDVRDKLYNTRERAR LLA+ +SDIPE+  YT+VEQFLEPLELCYRSLCA
Sbjct:   361 PPTEPYRVILGDVRDKLYNTRERARHLLAHDVSDIPEESVYTNVEQFLEPLELCYRSLCA 420

Query:   420 CGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEK 479
             CGDR IADGSLLDFLRQVSTFGLSLVRLDIRQES+RHTDV+DAIT+HL IGSYREWSEEK
Sbjct:   421 CGDRVIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITQHLEIGSYREWSEEK 480

Query:   480 RQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLA 539
             RQEWLLSEL GKRPLFG DLPKTEEIADVLDTFHV++ELPAD FGAYIISMAT+PSDVLA
Sbjct:   481 RQEWLLSELSGKRPLFGPDLPKTEEIADVLDTFHVLAELPADCFGAYIISMATSPSDVLA 540

Query:   540 VELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSG 599
             VELLQREC VKQPLRVVPLFEKLADLEAAPA+VARLFSI+WY+NRI GKQEVMIGYSDSG
Sbjct:   541 VELLQRECHVKQPLRVVPLFEKLADLEAAPAAVARLFSIEWYKNRIDGKQEVMIGYSDSG 600

Query:   600 KDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIH 659
             KDAGRLSAAWQLYK QEEL+ VAK++GVKLTMFH           PTHLAILSQPP+TIH
Sbjct:   601 KDAGRLSAAWQLYKAQEELINVAKKFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIH 660

Query:   660 GSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIAT 719
             GSLRVTVQGEVIEQSFGEEHLCFRTLQRF AATLEHGM+PP+SP+PEWRALMDEMAV AT
Sbjct:   661 GSLRVTVQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPRPEWRALMDEMAVYAT 720

Query:   720 KEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 779
             ++YR IVF+EPRFVEYFRLATPE+EYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR
Sbjct:   721 EQYREIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 780

Query:   780 FHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYD 839
             FHLPVWLGFGAAFK+ I+KDIKNLHMLQEMY  WPFFRVTIDLVEMVFAKGDPGIAAL D
Sbjct:   781 FHLPVWLGFGAAFKYAIEKDIKNLHMLQEMYKTWPFFRVTIDLVEMVFAKGDPGIAALND 840

Query:   840 KLLVSEELQPFGEKLRANYAETKSLLLQVCG 870
             KLLVSE+L  FGE LRANY ETK+LLL++ G
Sbjct:   841 KLLVSEDLWSFGESLRANYEETKNLLLKIAG 871

GO:0008964 "phosphoenolpyruvate carboxylase activity" evidence=IDA

GO:0015977 "carbon fixation" evidence=IDA

TAIR\|locus:2041529 PPC2 "phosphoenolpyruvate carboxylase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2009600 PPC1 "phosphoenolpyruvate carboxylase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2086315 PPC3 "phosphoenolpyruvate carboxylase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9FV66 PPCB "Phosphoenolpyruvate carboxylase 1" [Flaveria trinervia (taxid:4227)]	Back alignment and assigned GO terms

UNIPROTKB\|P30694 PPCA "C4 phosphoenolpyruvate carboxylase" [Flaveria trinervia (taxid:4227)]	Back alignment and assigned GO terms

TAIR\|locus:2012448 PPC4 "phosphoenolpyruvate carboxylase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|P00864 ppc "Ppc" [Escherichia coli K-12 (taxid:83333)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0287723 DDB_G0287723 "Phosphoenolpyruvate carboxylase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

TIGR_CMR\|SO_0274 SO_0274 "phosphoenolpyruvate carboxylase" [Shewanella oneidensis MR-1 (taxid:211586)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A6VUQ5	CAPP_MARMS	4, ., 1, ., 1, ., 3, 1	0.4325	0.8911	0.9063	yes	no
A3MA94	CAPP_ACIBT	4, ., 1, ., 1, ., 3, 1	0.4231	0.8877	0.8847	yes	no
Q6LVH1	CAPP_PHOPR	4, ., 1, ., 1, ., 3, 1	0.4176	0.8832	0.8984	yes	no
P27154	CAPP_TOBAC	4, ., 1, ., 1, ., 3, 1	0.8839	0.9764	0.9024	N/A	no
P10490	CAPP1_MESCR	4, ., 1, ., 1, ., 3, 1	0.8323	0.9764	0.9006	N/A	no
Q1R3V5	CAPP_ECOUT	4, ., 1, ., 1, ., 3, 1	0.4206	0.8933	0.9014	yes	no
Q9AU12	CAPP_PHAVU	4, ., 1, ., 1, ., 3, 1	0.8602	0.9764	0.8987	N/A	no
Q02735	CAPP_MEDSA	4, ., 1, ., 1, ., 3, 1	0.8632	0.9741	0.8985	N/A	no
Q83IS7	CAPP_SHIFL	4, ., 1, ., 1, ., 3, 1	0.4194	0.8933	0.9014	yes	no
A1AID4	CAPP_ECOK1	4, ., 1, ., 1, ., 3, 1	0.4206	0.8933	0.9014	yes	no
B7MR83	CAPP_ECO81	4, ., 1, ., 1, ., 3, 1	0.4194	0.8933	0.9014	yes	no
P81831	CAPP1_CHLRE	4, ., 1, ., 1, ., 3, 1	0.5094	0.9248	0.8459	N/A	no
B5XZ20	CAPP_KLEP3	4, ., 1, ., 1, ., 3, 1	0.4170	0.8933	0.9014	yes	no
Q5GM68	CAPP2_ARATH	4, ., 1, ., 1, ., 3, 1	0.8966	0.9741	0.9013	yes	no
P29193	CAPP1_SACHY	4, ., 1, ., 1, ., 3, 1	0.8840	0.9764	0.9006	N/A	no
P29195	CAPP1_SORBI	4, ., 1, ., 1, ., 3, 1	0.8807	0.9696	0.9	N/A	no
P29194	CAPP2_SORBI	4, ., 1, ., 1, ., 3, 1	0.8878	0.9708	0.9010	N/A	no
Q6DAR6	CAPP_ERWCT	4, ., 1, ., 1, ., 3, 1	0.4259	0.8945	0.9067	yes	no
P29196	CAPP_SOLTU	4, ., 1, ., 1, ., 3, 1	0.8897	0.9764	0.9015	N/A	no
C6DI86	CAPP_PECCP	4, ., 1, ., 1, ., 3, 1	0.4223	0.8945	0.9067	yes	no
Q1CNQ7	CAPP_YERPN	4, ., 1, ., 1, ., 3, 1	0.4184	0.8900	0.9031	yes	no
P16097	CAPP2_MESCR	4, ., 1, ., 1, ., 3, 1	0.8991	0.9674	0.8979	N/A	no
Q3KHE4	CAPP_PSEPF	4, ., 1, ., 1, ., 3, 1	0.4358	0.8989	0.9143	yes	no
Q6F6Q6	CAPP_ACIAD	4, ., 1, ., 1, ., 3, 1	0.4277	0.9124	0.9093	yes	no
Q9FV66	CAPPB_FLATR	4, ., 1, ., 1, ., 3, 1	0.8804	0.9764	0.9015	N/A	no
Q9FV65	CAPPC_FLATR	4, ., 1, ., 1, ., 3, 1	0.8955	0.9764	0.8996	N/A	no
B7MI92	CAPP_ECO45	4, ., 1, ., 1, ., 3, 1	0.4206	0.8933	0.9014	yes	no
Q01647	CAPP1_FLAPR	4, ., 1, ., 1, ., 3, 1	0.8748	0.9764	0.8996	N/A	no
Q9HXV3	CAPP_PSEAE	4, ., 1, ., 1, ., 3, 1	0.4404	0.9001	0.9134	yes	no
A6V1A0	CAPP_PSEA7	4, ., 1, ., 1, ., 3, 1	0.4357	0.9001	0.9134	yes	no
Q02909	CAPP1_SOYBN	4, ., 1, ., 1, ., 3, 1	0.8853	0.9764	0.8996	no	no
P15804	CAPP3_SORBI	4, ., 1, ., 1, ., 3, 1	0.7762	0.9663	0.8968	N/A	no
P51062	CAPP_PEA	4, ., 1, ., 1, ., 3, 1	0.8630	0.9730	0.8965	N/A	no
P51063	CAPP_PICAB	4, ., 1, ., 1, ., 3, 1	0.8712	0.9764	0.9034	N/A	no
P51061	CAPP2_SOYBN	4, ., 1, ., 1, ., 3, 1	0.8704	0.9764	0.8996	no	no
A4TRH7	CAPP_YERPP	4, ., 1, ., 1, ., 3, 1	0.4184	0.8900	0.9031	yes	no
A4SIM0	CAPP_AERS4	4, ., 1, ., 1, ., 3, 1	0.4278	0.8821	0.8962	yes	no
Q43299	CAPP_AMAHP	4, ., 1, ., 1, ., 3, 1	0.8211	0.9955	0.9201	N/A	no
Q9MAH0	CAPP1_ARATH	4, ., 1, ., 1, ., 3, 1	0.8841	0.9764	0.8996	no	no
A4XXP6	CAPP_PSEMY	4, ., 1, ., 1, ., 3, 1	0.4481	0.9034	0.9168	yes	no
A1U2U4	CAPP_MARAV	4, ., 1, ., 1, ., 3, 1	0.4398	0.8686	0.8785	yes	no
Q84VW9	CAPP3_ARATH	4, ., 1, ., 1, ., 3, 1	0.8831	0.9764	0.8987	no	no
A8GL86	CAPP_SERP5	4, ., 1, ., 1, ., 3, 1	0.4197	0.8967	0.9100	yes	no
Q2SL23	CAPP_HAHCH	4, ., 1, ., 1, ., 3, 1	0.4456	0.8742	0.8842	yes	no
P04711	CAPP1_MAIZE	4, ., 1, ., 1, ., 3, 1	0.8013	0.9696	0.8907	N/A	no
B7LUN9	CAPP_ESCF3	4, ., 1, ., 1, ., 3, 1	0.4182	0.8933	0.9014	yes	no
A0KFU8	CAPP_AERHH	4, ., 1, ., 1, ., 3, 1	0.4290	0.8821	0.8962	yes	no
C4L7S3	CAPP_TOLAT	4, ., 1, ., 1, ., 3, 1	0.4296	0.8742	0.8882	yes	no
P30694	CAPPA_FLATR	4, ., 1, ., 1, ., 3, 1	0.8471	0.9764	0.9006	N/A	no
P51059	CAPP2_MAIZE	4, ., 1, ., 1, ., 3, 1	0.8820	0.9708	0.8945	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.1.1.31	0.994
3rd Layer	4.1.1	0.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		891
pfam00311		794	pfam00311, PEPcase, Phosphoenolpyruvate carboxylas	0.0
PRK00009		911	PRK00009, PRK00009, phosphoenolpyruvate carboxylas	0.0
COG2352		910	COG2352, Ppc, Phosphoenolpyruvate carboxylase [Ene	0.0
PTZ00398		974	PTZ00398, PTZ00398, phosphoenolpyruvate carboxylas	0.0

>gnl\|CDD\|215852 pfam00311, PEPcase, Phosphoenolpyruvate carboxylase	Back alignment and domain information

 Score = 1108 bits (2868), Expect = 0.0
 Identities = 368/729 (50%), Positives = 477/729 (65%), Gaps = 27/729 (3%)

Query: 162 NQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFR 221
              + LVFTAHPT+ VRR++L K  RI   L QL   D+TP ++QELDE L+ EI+  ++
Sbjct: 1   ELDIRLVFTAHPTEIVRRTILDKQRRIAELLAQLDDADLTPRERQELDEQLREEIRLLWQ 60

Query: 222 TDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFS 281
           TDE+R+  PT  DE+R G+SYF ET++  +P+  RR+D ALK      R+P     ++F 
Sbjct: 61  TDELRQFKPTVLDEVRNGLSYFEETLFDALPQLYRRLDRALKESFPGLRLPLPNF-LRFG 119

Query: 282 SWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSM----WRCNDELRAR 337
           SW+GGDRDGNP VT+EVT +  LL R +A  LY   +E L FELSM       + EL A 
Sbjct: 120 SWIGGDRDGNPNVTAEVTWETLLLQRELALELYLKSVEALRFELSMSLRWSDVSPELLAS 179

Query: 338 ADGLHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPED 397
            +   R  ++  + Y E   +    EPYR+ L  +R +L NTRER   LLA    ++P  
Sbjct: 180 LE---RDREQLPEVYEE-LAERYRQEPYRLKLAYIRARLENTRERLAALLAGR--ELPPG 233

Query: 398 IAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHT 457
            AYT  E+ LE LEL YRSL   G   +ADG LLD +RQV  FG  L  LDIRQES RH 
Sbjct: 234 EAYTSAEELLEDLELIYRSLRETGGGLLADGRLLDLIRQVEVFGFHLATLDIRQESTRHE 293

Query: 458 DVIDAITKHLGI-GSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVIS 516
           D +  IT++LG+ G Y E SEE+RQ WLL EL  +RPL   DLP +EE  +VLDTF VI+
Sbjct: 294 DALAEITRYLGLPGDYAELSEEERQAWLLRELETRRPLIPPDLPFSEETREVLDTFRVIA 353

Query: 517 ELPA----DSFGAYIISMATAPSDVLAVELLQRECRVKQP------LRVVPLFEKLADLE 566
            L      ++ G YIISMA   SDVL V LL +E  +  P      LRVVPLFE + DL 
Sbjct: 354 RLQQEFGPEAIGTYIISMAHTASDVLEVLLLAKEAGLLDPATGRSTLRVVPLFETIEDLR 413

Query: 567 AAPASVARLFSIDWYRNRISG---KQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAK 623
            AP  + +LFS+ WYR  ++G    QEVM+GYSDS KD G L++ W+LYK QE LVKVA+
Sbjct: 414 NAPEIMRQLFSLPWYRELLAGRGDLQEVMLGYSDSNKDGGFLTSNWELYKAQEALVKVAE 473

Query: 624 QYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFR 683
           +YGVKL +FHGRGG+VGRGGGP + AIL+QPP T++G +R+T QGEVI   +G   L  R
Sbjct: 474 KYGVKLRLFHGRGGSVGRGGGPAYEAILAQPPGTLNGRIRITEQGEVIASKYGLPELALR 533

Query: 684 TLQRFSAATLEHGMHPPVSPK-PEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPE 742
            L+ ++AA LE  + PP  PK PEWR +M+E++  + K YR++V++ P FV+YFR ATP 
Sbjct: 534 NLELYTAAVLEASLLPPPPPKIPEWREIMEELSERSRKAYRALVYETPDFVDYFRQATPI 593

Query: 743 MEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKN 802
            E G++NIGSRP++RK SGGIESLRAIPW+F+WTQ+RF LP W G G A +  +QKD  N
Sbjct: 594 QEIGKLNIGSRPARRKGSGGIESLRAIPWVFSWTQSRFLLPAWYGVGTALQAFLQKDPGN 653

Query: 803 LHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEEL-QPFGEKLRANYAET 861
           L +L+EMY  WPFFR  I  VEMV AK D  IA  Y +LLV  EL +   E++RA Y  T
Sbjct: 654 LKLLREMYREWPFFRTLISNVEMVLAKADLQIARHYVQLLVDPELRERLFEQIRAEYELT 713

Query: 862 KSLLLQVCG 870
           + L+L++ G
Sbjct: 714 RELVLKITG 722

Length = 794

>gnl\|CDD\|234570 PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|225227 COG2352, Ppc, Phosphoenolpyruvate carboxylase [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|173589 PTZ00398, PTZ00398, phosphoenolpyruvate carboxylase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		891
COG2352		910	Ppc Phosphoenolpyruvate carboxylase [Energy produc	100.0
PRK00009		911	phosphoenolpyruvate carboxylase; Reviewed	100.0
PTZ00398		974	phosphoenolpyruvate carboxylase; Provisional	100.0
PF00311		794	PEPcase: Phosphoenolpyruvate carboxylase; InterPro	100.0
PRK13655		494	phosphoenolpyruvate carboxylase; Provisional	100.0
TIGR02751		506	PEPCase_arch phosphoenolpyruvate carboxylase, arch	100.0
PF14010		491	PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3	99.46
COG1892		488	Phosphoenolpyruvate carboxylase [Carbohydrate tran	98.92
PF03328		221	HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family	96.11
PRK10558		256	alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro	95.53
TIGR03239		249	GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co	94.93
TIGR01064		473	pyruv_kin pyruvate kinase. This enzyme is a homote	94.17
PRK08187		493	pyruvate kinase; Validated	90.61
PRK09206		470	pyruvate kinase; Provisional	90.58
PLN02623		581	pyruvate kinase	90.39
PRK05826		465	pyruvate kinase; Provisional	89.98
PTZ00300		454	pyruvate kinase; Provisional	89.26
cd00288		480	Pyruvate_Kinase Pyruvate kinase (PK): Large allost	87.95
TIGR01588		288	citE citrate lyase, beta subunit. This is a model	87.67
PRK06247		476	pyruvate kinase; Provisional	87.14
PRK06354		590	pyruvate kinase; Provisional	86.96

>COG2352 Ppc Phosphoenolpyruvate carboxylase [Energy production and conversion]	Back alignment and domain information

Probab=100.00  E-value=2.4e-244  Score=2074.07  Aligned_cols=839  Identities=42%  Similarity=0.705  Sum_probs=791.4

Q ss_pred             chHhhHHHHHHHHHHH-HHHHhhhChhHHHHHHHHHHHHHhhhcCCChhHHHHHHHHhcCCChhhHHHHHHHHHHHhhhh
Q 002698           27 DDKLVEYDALLLDRFL-DILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLA  105 (891)
Q Consensus        27 ~~~~l~~~~~ll~~ll-~vi~e~~G~~~~~~ve~iR~la~~~~~~~~~~~~~~L~~~l~~L~~~~~~~varAFs~~f~L~  105 (891)
                      .+..++.|+.+||.+| ++|+++.|+++|++||+||+++++.|.+ +.+++.+|.+.+.+|+.+++..++||||+|++|+
T Consensus         5 ~~~~lr~~v~~Lg~lLge~i~e~~g~~~~e~ve~ir~~s~~~r~~-~~~~~~~L~~~l~~Ls~~~~~~vaRaFs~f~~L~   83 (910)
T COG2352           5 KYSALRSDVSMLGRLLGETIREAEGEAILELVETIRKLSKESRAG-DQADRQELEATLANLSNDEAIPVARAFSQFLLLA   83 (910)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc-chhhHHHHHHHHcCCCHhhhhHHHHHHHHHhhhh
Confidence            5679999999999999 9999999999999999999999988776 4567889999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHhhcCCCcccCCCCCcchHHHHHHHHHHHcCCCHHHHHHHhhcCceeEeeccCCCccchhhHHHHH
Q 002698          106 NLAEEVQIAYRRRIKLKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKH  185 (891)
Q Consensus       106 NiAEe~~r~r~~r~~~~~~~~~~~~~~~~~~sl~~~l~~L~~~~g~~~~~i~~~L~~~~i~pVlTAHPTEa~Rrtvl~~~  185 (891)
                      ||||+.|..|+++.+...+.        ..+||..++++| ++.|++++++.+.|+++.|+|||||||||++||||++|+
T Consensus        84 NiaEd~~~~~r~~~~~~~~~--------~~~sL~~~~~~L-k~~~~~~~~v~~~l~~l~v~lVLTAHPTEv~RrTv~~~~  154 (910)
T COG2352          84 NIAEDYHRIRRRQIHEAAGD--------SDGSLAATLKKL-KEQGLSPETVARALENLNVELVLTAHPTEVQRRTVIDKQ  154 (910)
T ss_pred             hHHHHhhhHhhhhhhhccCC--------CcchHHHHHHHH-HhcCCCHHHHHHHHHhCceeEEEecCchHHHHHHHHHHH
Confidence            99999999988765544332        338999999999 899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhc
Q 002698          186 GRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNI  265 (891)
Q Consensus       186 ~~I~~lL~~~~~~~~~~~e~~~~~~~L~~~i~~LW~T~~iR~~kPtv~DE~~~~l~y~~~~l~~avP~~~~~l~~al~~~  265 (891)
                      ++|.++|.+++...+++. ++.++++|++.|..+|||+++|..||||.||++||++||++|||++||++|++++.++.++
T Consensus       155 ~~I~~lL~~~~~~~~~~~-~~~~~~~L~~~I~~~W~TdeiR~~rptv~DEi~~gl~y~~~sl~~avP~l~r~~~~~~~~~  233 (910)
T COG2352         155 REINRLLRKLDHADLSDE-RARIRRRLRRLIAQLWQTDEIRKLRPTVLDEIKNGLAYYENSLWQAVPKLLRELNEALQET  233 (910)
T ss_pred             HHHHHHHHHhhcccchhH-HHHHHHHHHHHHHHHhhhhHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999987766665 9999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCcccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----cCCCHHHHHHHhhh
Q 002698          266 GINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSM----WRCNDELRARADGL  341 (891)
Q Consensus       266 ~~~~~~~~~~~~i~fgSWiGGDRDGNP~VT~~vT~~~~~~~r~~~l~~y~~~l~~L~~~LS~----~~~~~~l~~~~~~~  341 (891)
                      ++ ...|..++|++|||||||||||||||||+||++++..+|+++++.|..+|.+|+.+||+    ++||++|.++++. 
T Consensus       234 ~~-~~~~~~~~p~~~gSWiGGDRDGNPfVTae~tr~~~~~~r~~~~~~Yl~~i~~L~~eLS~S~~~~~vs~el~ala~~-  311 (910)
T COG2352         234 FG-ELLPVEAVPLRFGSWIGGDRDGNPFVTAETTRQALLLQRWKALDLYLKEIQKLYSELSMSTRLVKVSPELLALAGE-  311 (910)
T ss_pred             cc-cccCCCCCccccccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhcccCCHHHHHHHhc-
Confidence            64 34566678999999999999999999999999999999999999999999999999999    6899999998776 


Q ss_pred             hhcchhhhhhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCChHHhhhHHHHHHHHHHhcC
Q 002698          342 HRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACG  421 (891)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~EpyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~~~ell~dL~~i~~SL~~~~  421 (891)
                         +++...+        +.+||||++|.+|++||.+|...+.+...... ......+|.+++||++||..|++||.+||
T Consensus       312 ---~~d~~~~--------r~~EPYR~al~~i~~rL~~T~~~l~~~~~~~~-~~~~~~~y~~~~el~~dL~~i~~SL~~~G  379 (910)
T COG2352         312 ---SQDQSIR--------RADEPYRRALKYIRSRLMATQAYLDGLLAGEE-GVGPEPPYTSPEELLEDLYAIYQSLHACG  379 (910)
T ss_pred             ---Cccccch--------hccccHHHHHHHHHHHHHHHHHHHhccccccc-cCCCCcccCCHHHHHHHHHHHHHHHHhcC
Confidence               3333333        37899999999999999999987655432111 22234589999999999999999999999


Q ss_pred             CccchhhHHHHHHHHHHhcCCccccccccccchHHHHHHHHHHHHcCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCC
Q 002698          422 DRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIG-SYREWSEEKRQEWLLSELRGKRPLFGSDLP  500 (891)
Q Consensus       422 ~~~~a~~~l~~li~~v~~FGfhla~LDiRQ~S~~H~~a~~ei~~~~g~~-~y~~l~E~~r~~~L~~eL~~~rpl~~~~~~  500 (891)
                      ++.+|+|.|.+++++|++|||||++|||||||++|++||+||++++|++ +|.+|+|++|++||.+||+++|||+++.++
T Consensus       380 ~~~la~g~L~~ll~~v~~FGf~L~~LDiRQ~S~~h~~avaEL~~~ag~~~dY~~lsE~~K~~~L~~EL~s~RPL~p~~~~  459 (910)
T COG2352         380 MEILADGRLLDLLRRVEVFGFHLVSLDIRQESTRHEEAVAELLRYAGLGADYSSLSEEDKQAFLLRELSSRRPLLPPFWQ  459 (910)
T ss_pred             CceeccchHHHHHHHHHhcCceeeccccccccchHHHHHHHHHHHccCCCChhhcCHHHHHHHHHHHhcCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHhC----CCcchhHHHhhcCCChhhHHHHHHHHHHcCCC----CCCccccccCChHHHhchHHHH
Q 002698          501 KTEEIADVLDTFHVISEL----PADSFGAYIISMATAPSDVLAVELLQRECRVK----QPLRVVPLFEKLADLEAAPASV  572 (891)
Q Consensus       501 ~s~~~~e~l~~f~~i~~~----~~~a~~~yIISmt~s~sDvL~vl~L~k~~Gl~----~~l~VvPLFETi~DL~~a~~il  572 (891)
                      +|+.++++|+||+++++.    |+++|++||||||+++||||||++|+||+|+.    .+++|||||||||||+||+.||
T Consensus       460 ~Se~t~~~L~t~r~a~~~~~~~G~~~i~~yIISma~s~SDvLev~lLlKE~Gl~~~~~~~v~VvPLFETieDL~na~~vm  539 (910)
T COG2352         460 PSEETREELATFRVAAEAKDEFGEDAIGAYIISMAESVSDVLEVLLLLKEAGLVDPERARVPVVPLFETIEDLDNAPDVM  539 (910)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccCCHHHHHHHHHHHHHhCCCCccCCccccccccccHHHHhccHHHH
Confidence            999999999999999975    56789999999999999999999999999998    7999999999999999999999


Q ss_pred             HHHhccHHHHhhc---CCeeEEEEeeccCCCchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchhhh
Q 002698          573 ARLFSIDWYRNRI---SGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLA  649 (891)
Q Consensus       573 ~~ll~~p~yr~~l---~~~qeVMlGYSDS~KDgG~las~W~Ly~Aq~~L~~v~~~~gV~l~~FHGRGGSvgRGGGPt~~a  649 (891)
                      ++||+.|+||..|   +|.||||||||||||||||++|||++|+||+.|+++|+|+||+++|||||||||||||||+|.|
T Consensus       540 ~~ll~l~~yR~~l~~~~n~QEVMlGYSDSnKDgG~laa~Wa~y~Aq~aLv~~~~~~gV~LrlFHGRGGtVGRGGGPa~~A  619 (910)
T COG2352         540 TQLLNLPLYRALLAGRGNVQEVMLGYSDSNKDGGYLAANWALYKAQLALVELCEKAGVELRLFHGRGGSVGRGGGPAYAA  619 (910)
T ss_pred             HHHHcChHHHHHHcCCCCceEEEecccccccccchhhhHHHHHHHHHHHHHHHHHhCceEEEEccCCCCCCCCCchHHHH
Confidence            9999999999999   3699999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCcccCceeeecccchhhhhcCChhHHHHHHHHHHHHHHHccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhhc
Q 002698          650 ILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPP-VSPKPEWRALMDEMAVIATKEYRSIVFQ  728 (891)
Q Consensus       650 i~aqP~gs~~g~irvTeQGEvI~~kyg~~~~A~r~Le~~~~a~l~~s~~~~-~~~~~~~~~~m~~ls~~s~~~Yr~lv~~  728 (891)
                      |+||||||++|+||+|||||||..|||+|++|.||||.+++|+|++++.|+ +.|+++|+.+||+||+.||++||+|||+
T Consensus       620 ILsQP~gsv~g~iRiTEQGE~I~~Kyg~p~~A~~nLe~l~sAvLeAsllp~~~dp~~~~~~iMd~ls~~S~~~YR~lV~~  699 (910)
T COG2352         620 ILSQPPGSVKGRIRITEQGEMIAFKYGLPEVARRNLETLVSAVLEASLLPPKPDPKESWRAIMDELSDISCDAYRGLVRE  699 (910)
T ss_pred             HhcCCCcccCCceEeehhHHHHHHhhCChHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999999876 6777889999999999999999999999


Q ss_pred             CCchhhHHHhhCchhHhhhCCCCCCCCccCCC-CCCCCccccchhhhhhhhhccccchhhHHHHHHHHHHhCCCcHHHHH
Q 002698          729 EPRFVEYFRLATPEMEYGRMNIGSRPSKRKPS-GGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQ  807 (891)
Q Consensus       729 ~p~F~~yF~~aTPi~ei~~l~IGSRPa~R~~~-~~l~dLRAIPWVFaWtQ~R~~lP~WyGvGsAl~~~~~~~~~~~~~L~  807 (891)
                      +|+|++||+++|||+||++||||||||||+.. ++++|||||||||||||+|+|||||||+|+|++++++++|++.+.|+
T Consensus       700 ~pdFvdyF~~~TPi~EIs~LniGSRPA~Rk~~~~~ie~LRAIPWVFSWsQnR~mLP~WyG~Gsal~~~i~~g~~~~~~L~  779 (910)
T COG2352         700 NPDFVDYFRQATPIQEISKLNIGSRPASRKPTTGGIESLRAIPWVFSWTQNRLMLPAWYGVGSALQRFIEEGPENLALLR  779 (910)
T ss_pred             CCcHHHHHHhcCcHHHHhcCCCCCCCcCCCCCCCccccccccchhhhhhhhhhcchhhhhhhHHHHHHHHcCcchHHHHH
Confidence            99999999999999999999999999999976 56999999999999999999999999999999999999987899999


Q ss_pred             HHHhhChhHHHHHHHHHHHHHhccHHHHHHHHhhcCCccch-HHHHHHHHHHHHHHHHHHHHhCCcccccCCchHHHHHH
Q 002698          808 EMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQ-PFGEKLRANYAETKSLLLQVCGANHWSDFRKVIIVISK  886 (891)
Q Consensus       808 ~my~~wpfF~t~idnvem~LaKaD~~Ia~~Ya~l~~d~~~~-~i~~~i~~E~~~T~~~vl~itg~~~Ll~~~p~l~~si~  886 (891)
                      +||++||||+++|+||+|+|+|+||.||.+|+++++|+++. ++|++|++||++|+++++.|+|+++||+++|+|++||.
T Consensus       780 ~m~~~WPFF~s~Lsn~emvlaKsd~~iA~~Y~qll~d~~~~~~lf~~i~~e~~~T~~~vl~I~~~~~LL~d~p~La~Si~  859 (910)
T COG2352         780 DMYQNWPFFSSRLSNMEMVLAKSDLWLAEHYAQLLVDPELGERLFDQIREEYQLTRKVVLAITGHDELLADNPWLAESIA  859 (910)
T ss_pred             HHHhcCcHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhcCchhhhcCCHHHHHHHH
Confidence            99999999999999999999999999999999999999965 99999999999999999999999999999999999999


Q ss_pred             hhhc
Q 002698          887 LRYK  890 (891)
Q Consensus       887 ~r~~  890 (891)
                      +||-
T Consensus       860 lRn~  863 (910)
T COG2352         860 LRNP  863 (910)
T ss_pred             Hhcc
Confidence            9985

>PRK00009 phosphoenolpyruvate carboxylase; Reviewed	Back alignment and domain information

>PTZ00398 phosphoenolpyruvate carboxylase; Provisional	Back alignment and domain information

>PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion []	Back alignment and domain information

>PRK13655 phosphoenolpyruvate carboxylase; Provisional	Back alignment and domain information

>TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type	Back alignment and domain information

>PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C	Back alignment and domain information

>COG1892 Phosphoenolpyruvate carboxylase [Carbohydrate transport and metabolism; Energy production and conversion]	Back alignment and domain information

>PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4	Back alignment and domain information

>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	Back alignment and domain information

>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase	Back alignment and domain information

>TIGR01064 pyruv_kin pyruvate kinase	Back alignment and domain information

>PRK08187 pyruvate kinase; Validated	Back alignment and domain information

>PRK09206 pyruvate kinase; Provisional	Back alignment and domain information

>PLN02623 pyruvate kinase	Back alignment and domain information

>PRK05826 pyruvate kinase; Provisional	Back alignment and domain information

>PTZ00300 pyruvate kinase; Provisional	Back alignment and domain information

>cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors	Back alignment and domain information

>TIGR01588 citE citrate lyase, beta subunit	Back alignment and domain information

>PRK06247 pyruvate kinase; Provisional	Back alignment and domain information

>PRK06354 pyruvate kinase; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		891
3zgb_A		972	Greater Efficiency Of Photosynthetic Carbon Fixatio		0.0
3zge_A		990	Greater Efficiency Of Photosynthetic Carbon Fixatio		0.0
1jqo_A		970	Crystal Structure Of C4-Form Phosphoenolpyruvate Ca		0.0
1qb4_A		883	Crystal Structure Of Mn(2+)-Bound Phosphoenolpyruva		1e-176

>pdb|3ZGB|A Chain A, Greater Efficiency Of Photosynthetic Carbon Fixation Due To Single Amino Acid Substitution Length = 972

Back alignment and structure

Iteration: 1

Score = 1580 bits (4092), Expect = 0.0, Method: Compositional matrix adjust. Identities = 748/865 (86%), Positives = 806/865 (93%) Query: 6 LEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSA 65 LEK+ASIDAQLRLL P KVSEDDKL+EYDALLLD+FLDILQDLHGED++E VQECYELSA Sbjct: 12 LEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEDLKEAVQECYELSA 71 Query: 66 EYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIKLKKGD 125 EYEGK D +KLEELG+VLTSLDPGDSIV+ K+FSHMLNLANLAEEVQIAYRRRIKLK+GD Sbjct: 72 EYEGKHDPKKLEELGSVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIKLKRGD 131 Query: 126 FVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKH 185 F DE +ATTESDIEET K+LV++L KSPEEVFDALKNQTVDLV TAHPTQSVRRSLLQKH Sbjct: 132 FADEANATTESDIEETFKKLVLKLNKSPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKH 191 Query: 186 GRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHE 245 GRIRNCL QLYAKDITPDDKQELDEAL REIQAAFRTDEIRR+PPTPQDEMRAGMSYFHE Sbjct: 192 GRIRNCLAQLYAKDITPDDKQELDEALHREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHE 251 Query: 246 TIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLL 305 TIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVT EVTRDVCLL Sbjct: 252 TIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLL 311 Query: 306 ARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQIPPNEPY 365 ARMMA+N+YFSQIEDLMFE+SMWRCN ELR RA+ L+R+++RD KHYIEFWKQ+PP EPY Sbjct: 312 ARMMASNMYFSQIEDLMFEMSMWRCNSELRVRAEELYRTARRDVKHYIEFWKQVPPTEPY 371 Query: 366 RVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPI 425 RVILGDVRDKLYNTRER+R LLA+GISDIPE+ YT+VEQFLEPLELCYRSLC CGDR I Sbjct: 372 RVILGDVRDKLYNTRERSRHLLAHGISDIPEEAVYTNVEQFLEPLELCYRSLCDCGDRVI 431 Query: 426 ADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLL 485 ADGSLLDFLRQVSTFGLSLV+LDIRQES+RHTDV+DAIT+HL IGSYREWSEEKRQEWLL Sbjct: 432 ADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVLDAITQHLEIGSYREWSEEKRQEWLL 491 Query: 486 SELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQR 545 +EL GKRPLFGSDLPKTEE+ DVLDTF+V++ELP+D FGAYIISMAT+PSDVLAVELLQR Sbjct: 492 AELSGKRPLFGSDLPKTEEVKDVLDTFNVLAELPSDCFGAYIISMATSPSDVLAVELLQR 551 Query: 546 ECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRL 605 EC VK PLRVVPLFEKLADLEAAPA++ARLFSIDWYRNRI GKQEVMIGYSDSGKDAGR Sbjct: 552 ECHVKHPLRVVPLFEKLADLEAAPAAMARLFSIDWYRNRIDGKQEVMIGYSDSGKDAGRF 611 Query: 606 SAAWQLYKTQEELVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVT 665 SAAWQLYK QEE++KVAK++GVKL +FH PTHLAILSQPPDTIHGSLRVT Sbjct: 612 SAAWQLYKAQEEIIKVAKEFGVKLVIFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVT 671 Query: 666 VQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSI 725 VQGEVIEQSFGEEHLCFRTLQRF AATLEHGM+PP+SP+PEWR LMD+MAV+AT+EYRSI Sbjct: 672 VQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPRPEWRELMDQMAVVATEEYRSI 731 Query: 726 VFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVW 785 VF+EPRFVEYFRLATPE+EYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVW Sbjct: 732 VFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVW 791 Query: 786 LGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSE 845 LGFGAAFKH I+KD KNL MLQEMY WPFFRVTIDLVEMVFAKGDPGIAAL DKLLVSE Sbjct: 792 LGFGAAFKHAIKKDSKNLQMLQEMYKTWPFFRVTIDLVEMVFAKGDPGIAALNDKLLVSE 851 Query: 846 ELQPFGEKLRANYAETKSLLLQVCG 870 +L PFGE LRANY ETK LL++ G Sbjct: 852 DLWPFGESLRANYEETKDYLLKIAG 876

PyMOL of 3zgb

>pdb|3ZGE|A Chain A, Greater Efficiency Of Photosynthetic Carbon Fixation Due To Single Amino Acid Substitution Length = 990

Back alignment and structure

>pdb|1JQO|A Chain A, Crystal Structure Of C4-Form Phosphoenolpyruvate Carboxylase From Maize Length = 970

Back alignment and structure

>pdb|1QB4|A Chain A, Crystal Structure Of Mn(2+)-Bound Phosphoenolpyruvate Carboxylase Length = 883

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		891
1jqo_A		970	Phosphoenolpyruvate carboxylase; beta barrel, carb	0.0
1jqn_A		883	Pepcase, PEPC, phosphoenolpyruvate carboxylase; be	0.0
3odm_A		560	Pepcase, PEPC, phosphoenolpyruvate carboxylase; be	3e-70
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07

>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Length = 970	Back alignment and structure

 Score = 1222 bits (3163), Expect = 0.0
 Identities = 695/874 (79%), Positives = 771/874 (88%), Gaps = 2/874 (0%)

Query: 2   AARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECY 61
           A    EK  SIDAQLR L P KVSEDDKL+EYDALL+DRFL+ILQDLHG  +RE VQECY
Sbjct: 6   APGPGEKHHSIDAQLRQLVPGKVSEDDKLIEYDALLVDRFLNILQDLHGPSLREFVQECY 65

Query: 62  ELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRR-IK 120
           E+SA+YEGK D+ KL ELG  LT L P D+I+V  S  HMLNLANLAEEVQIA+RRR  K
Sbjct: 66  EVSADYEGKGDTTKLGELGAKLTGLAPADAILVASSILHMLNLANLAEEVQIAHRRRNSK 125

Query: 121 LKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRS 180
           LKKG F DE SATTESDIEETLKRLV ++ KSPEEVF+ALKNQTVDLVFTAHPTQS RRS
Sbjct: 126 LKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQTVDLVFTAHPTQSARRS 185

Query: 181 LLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGM 240
           LLQK+ RIRNCLTQL AKDIT DDKQELDEALQREIQAAFRTDEIRR+ PTPQ EMR GM
Sbjct: 186 LLQKNARIRNCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGM 245

Query: 241 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTR 300
           SY HET+WKGVPKFLRRVDTALKNIGINER+PYN  LI+FSSWMGGDRDGNPRVT EVTR
Sbjct: 246 SYIHETVWKGVPKFLRRVDTALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVTPEVTR 305

Query: 301 DVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRD-AKHYIEFWKQI 359
           DVCLLARMMAANLY  QIE+LMFELSMWRCNDELR RA+ LH SS     K+YIEFWKQI
Sbjct: 306 DVCLLARMMAANLYIDQIEELMFELSMWRCNDELRVRAEELHSSSGSKVTKYYIEFWKQI 365

Query: 360 PPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCA 419
           PPNEPYRVILG VRDKLYNTRERAR LLA+G+S+I  + ++T +E+FLEPLELCY+SLC 
Sbjct: 366 PPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTSIEEFLEPLELCYKSLCD 425

Query: 420 CGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEK 479
           CGD+ IADGSLLD LRQV TFGLSLV+LDIRQESERHTDVIDAIT HLGIGSYREW E+K
Sbjct: 426 CGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDK 485

Query: 480 RQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLA 539
           RQEWLLSELRGKRPL   DLP+T+EIADV+  FHV++ELP DSFG YIISMATAPSDVLA
Sbjct: 486 RQEWLLSELRGKRPLLPPDLPQTDEIADVIGAFHVLAELPPDSFGPYIISMATAPSDVLA 545

Query: 540 VELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSG 599
           VELLQREC V+QPL VVPLFE+LADL++APASV RLFS+DWY +RI GKQ+VM+GYSDSG
Sbjct: 546 VELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSG 605

Query: 600 KDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH 659
           KDAGRLSAAWQLY+ QEE+ +VAK+YGVKLT+FHGRGGTVGRGGGPTHLAILSQPPDTI+
Sbjct: 606 KDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTIN 665

Query: 660 GSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIAT 719
           GS+RVTVQGEVIE  FGEEHLCF+TLQRF+AATLEHGMHPPVSPKPEWR LMDEMAV+AT
Sbjct: 666 GSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVAT 725

Query: 720 KEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 779
           +EYRS+V +E RFVEYFR ATPE EYGRMNIGSRP+KR+P GGI +LRAIPWIF+WTQTR
Sbjct: 726 EEYRSVVVKEARFVEYFRSATPETEYGRMNIGSRPAKRRPGGGITTLRAIPWIFSWTQTR 785

Query: 780 FHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYD 839
           FHLPVWLG GAAFK  I KD++N  +L+EMYN WPFFRVT+DL+EMVFAKGDPGIA LYD
Sbjct: 786 FHLPVWLGVGAAFKFAIDKDVRNFQVLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAGLYD 845

Query: 840 KLLVSEELQPFGEKLRANYAETKSLLLQVCGANH 873
           +LLV+EEL+PFG++LR  Y ET+ LLLQ+ G   
Sbjct: 846 ELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKD 879

PyMOL of 1jqo

>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Length = 883	Back alignment and structure

>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Length = 560	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		891
d1jqoa_		936	c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Esc	0.0
d1jqna_		880	c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Esc	0.0

>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Length = 936	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Phosphoenolpyruvate carboxylase
domain: Phosphoenolpyruvate carboxylase
species: Escherichia coli [TaxId: 562]

 Score = 1003 bits (2593), Expect = 0.0
 Identities = 675/845 (79%), Positives = 752/845 (88%), Gaps = 2/845 (0%)

Query: 31  VEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGD 90
           +EYDALL+DRFL+ILQDLHG  +RE VQECYE+SA+YEGK D+ KL ELG  LT L P D
Sbjct: 1   IEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLTGLAPAD 60

Query: 91  SIVVTKSFSHMLNLANLAEEVQIAYRRRI-KLKKGDFVDENSATTESDIEETLKRLVVQL 149
           +I+V  S  HMLNLANLAEEVQIA+RRR  KLKKG F DE SATTESDIEETLKRLV ++
Sbjct: 61  AILVASSILHMLNLANLAEEVQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVSEV 120

Query: 150 KKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELD 209
            KSPEEVF+ALKNQTVDLVFTAHPTQS RRSLLQK+ RIRNCLTQL AKDIT DDKQELD
Sbjct: 121 GKSPEEVFEALKNQTVDLVFTAHPTQSARRSLLQKNARIRNCLTQLNAKDITDDDKQELD 180

Query: 210 EALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINE 269
           EALQREIQAAFRTDEIRR+ PTPQ EMR GMSY HET+WKGVPKFLRRVDTALKNIGINE
Sbjct: 181 EALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYIHETVWKGVPKFLRRVDTALKNIGINE 240

Query: 270 RVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWR 329
           R+PYN  LI+FSSWMGGDRDGNPRVT EVTRDVCLLARMMAANLY  QIE+LMFELSMWR
Sbjct: 241 RLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMFELSMWR 300

Query: 330 CNDELRARADGLHRSS-KRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLA 388
           CNDELR RA+ LH SS  +  K+YIEFWKQIPPNEPYRVILG VRDKLYNTRERAR LLA
Sbjct: 301 CNDELRVRAEELHSSSGSKVTKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLA 360

Query: 389 NGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLD 448
           +G+S+I  + ++T +E+FLEPLELCY+SLC CGD+ IADGSLLD LRQV TFGLSLV+LD
Sbjct: 361 SGVSEISAESSFTSIEEFLEPLELCYKSLCDCGDKAIADGSLLDLLRQVFTFGLSLVKLD 420

Query: 449 IRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADV 508
           IRQESERHTDVIDAIT HLGIGSYREW E+KRQEWLLSELRGKRPL   DLP+T+EIADV
Sbjct: 421 IRQESERHTDVIDAITTHLGIGSYREWPEDKRQEWLLSELRGKRPLLPPDLPQTDEIADV 480

Query: 509 LDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAA 568
           +  FHV++ELP DSFG YIISMATAPSDVLAVELLQREC V+QPL VVPLFE+LADL++A
Sbjct: 481 IGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSA 540

Query: 569 PASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVK 628
           PASV RLFS+DWY +RI GKQ+VM+GYSDSGKDAGRLSAAWQLY+ QEE+ +VAK+YGVK
Sbjct: 541 PASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVK 600

Query: 629 LTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRF 688
           LT+FHGRGGTVGRGGGPTHLAILSQPPDTI+GS+RVTVQGEVIE  FGEEHLCF+TLQRF
Sbjct: 601 LTLFHGRGGTVGRGGGPTHLAILSQPPDTINGSIRVTVQGEVIEFCFGEEHLCFQTLQRF 660

Query: 689 SAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRM 748
           +AATLEHGMHPPVSPKPEWR LMDEMAV+AT+EYRS+V +E RFVEYFR ATPE EYGRM
Sbjct: 661 TAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEYRSVVVKEARFVEYFRSATPETEYGRM 720

Query: 749 NIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQE 808
           NIGSRP+KR+P GGI +LRAIPWIF+WTQTRFHLPVWLG GAAFK  I KD++N  +L+E
Sbjct: 721 NIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRNFQVLKE 780

Query: 809 MYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQV 868
           MYN WPFFRVT+DL+EMVFAKGDPGIA LYD+LLV+EEL+PFG++LR  Y ET+ LLLQ+
Sbjct: 781 MYNEWPFFRVTLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQI 840

Query: 869 CGANH 873
            G   
Sbjct: 841 AGHKD 845

PyMOL of d1jqoa_

>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Length = 880	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		891
d1jqoa_		936	Phosphoenolpyruvate carboxylase {Escherichia coli	100.0
d1jqna_		880	Phosphoenolpyruvate carboxylase {Escherichia coli	100.0
d1sgja_		231	Citrate lyase, beta subunit {Deinococcus radiodura	92.0
d1u5ha_		223	Citrate lyase, beta subunit {Mycobacterium tubercu	87.21

>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Phosphoenolpyruvate carboxylase
domain: Phosphoenolpyruvate carboxylase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=0  Score=2054.46  Aligned_cols=860  Identities=78%  Similarity=1.251  Sum_probs=805.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHH
Q ss_conf             39999999999999986208359999999998778541478905899999886089900089999999998611448989
Q 002698           31 VEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEE  110 (891)
Q Consensus        31 l~~~~~ll~~ll~vi~e~~G~~l~~~ve~iR~la~~~~~~~~~~~~~~L~~~l~~L~~~~~~~vaRAFs~~f~L~NiAE~  110 (891)
                      ++.|+++||++++||++|+|+++|++||+||.++++++..++++..++|...+++|+++++..|+||||+||+|+||||+
T Consensus         1 ~~~D~~llg~ll~vi~e~~G~~~~~~vE~iR~ls~~~r~~~~~~~~~~L~~~l~~L~~~~~~~v~RAFs~~f~L~NiAE~   80 (936)
T d1jqoa_           1 IEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLTGLAPADAILVASSILHMLNLANLAEE   80 (936)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             92488889889999998507899999999999999987248878899999999779989999999999999999999998


Q ss_pred             HHHHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHH
Q ss_conf             999999999863-0898666777982319999999999739997899998512732483406998510455899999999
Q 002698          111 VQIAYRRRIKLK-KGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIR  189 (891)
Q Consensus       111 ~~r~r~~r~~~~-~~~~~~~~~~~~~~sl~~~l~~L~~~~g~~~e~i~~~L~~~~i~pVlTAHPTEa~RrTvL~k~~rI~  189 (891)
                      +|++|++|..+. .+...++...+..+|++++|.+|+++.|++++++++.|+++.|+|||||||||++|||||+|+++|+
T Consensus        81 ~~~~rr~R~~~~~~~~~~~~g~~~~~~sl~~al~~L~~~~g~~~e~i~~~L~~~~i~pVlTAHPTEa~RrTvL~~~r~I~  160 (936)
T d1jqoa_          81 VQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQTVDLVFTAHPTQSARRSLLQKNARIR  160 (936)
T ss_dssp             HHHHHHHHCC-----------------CHHHHHHHHHTTSCCCHHHHHHHHHTCEEEEEEECCTTCCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf             89999999987521455555666765649999999998659899999999835956677556998872688999999999


Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             99986521999912599999999999999502143247999949989999999998755359999999999998429899
Q 002698          190 NCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINE  269 (891)
Q Consensus       190 ~lL~~~~~~~l~~~e~~~~~~~L~~eI~~LW~TdeiR~~kPTv~DE~~~~l~y~~~sl~~aiP~~~~~l~~al~~~~~~~  269 (891)
                      .+|.++++..++|.|+.+++++|+++|+.||||+++|..||||.||++||++||+++||++||++|+++++++.+++++.
T Consensus       161 ~lL~~ld~~~lt~~e~~~~~~~L~~~I~~LW~T~eiR~~KPtv~DE~~~~l~y~~~sl~~avP~l~~~l~~al~~~~~~~  240 (936)
T d1jqoa_         161 NCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYIHETVWKGVPKFLRRVDTALKNIGINE  240 (936)
T ss_dssp             HHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHSCCSCCSCCCHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHTTTCCS
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99998653669858899999999999999857531024799869999999999885058778999999999998647774


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH
Q ss_conf             99999996201556778999998779798999999999999999999999999771486787989997843321003433
Q 002698          270 RVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDA  349 (891)
Q Consensus       270 ~~p~~~~~i~fgSWiGGDRDGNP~VT~~vT~~~~~~~r~~~l~~y~~~l~~L~~~LS~~~~~~~l~~~~~~~~~~~~~~~  349 (891)
                      ..|..|++|+|||||||||||||||||+||++++.++|+.++++|++++++|.++||++.++.++...............
T Consensus       241 ~~~~~~~~irfGSWiGGDRDGNP~VTaevT~~~l~~~r~~al~~Y~~~l~~L~~~LS~s~~~~~~~~~~~~l~~~~~~~~  320 (936)
T d1jqoa_         241 RLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMFELSMWRCNDELRVRAEELHSSSGSKV  320 (936)
T ss_dssp             CCCTTCCSEEEEECTTTBCTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             56667772035313444798998879899999999999999999999999999970852020133157899998656566


Q ss_pred             -HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             -4444321159999928799999999999999999986507989998688899967733399999999976399444102
Q 002698          350 -KHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADG  428 (891)
Q Consensus       350 -~~~~~~~~~~~~~EpyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~~~ell~dL~~i~~sL~~~~~~~~a~~  428 (891)
                       ..+..+...++.+||||++|..|++||.+|.......+.........+.+|.+++||++||.+|++||+++++..+|++
T Consensus       321 ~~~~~~~~~~~~~~EPyR~~L~~i~~RL~~t~~~~~~~~~~~~~~~~~~~~Y~s~~ell~dL~~i~~SL~~~g~~~la~~  400 (936)
T d1jqoa_         321 TKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTSIEEFLEPLELCYKSLCDCGDKAIADG  400 (936)
T ss_dssp             CTTCSSSCSCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCSTTSCCSHHHHHHHHHHHHHHHHHTSCCTTTTT
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf             77767898751763288999999999999999999987514667777323457779999999999999987386333453


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             79999999986097533333332212899999999998199999999999999999978628999999999999889999
Q 002698          429 SLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADV  508 (891)
Q Consensus       429 ~L~~li~~v~~FGfhla~LDiRQ~S~~H~~ai~ei~~~~g~~~y~~l~E~~r~~~L~~eL~~~rpl~~~~~~~s~~~~e~  508 (891)
                      .|.+||++|++|||||++|||||||++|++|+++|++++|+++|.+|+|++|+++|..+|.++||+.++..+.++++.++
T Consensus       401 ~L~~Lir~V~~FGfhLa~LDIRQ~S~~H~~ai~el~~~~g~~~y~~~~e~~r~~~L~~eL~~~rpl~~~~~~~~~e~~~~  480 (936)
T d1jqoa_         401 SLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDKRQEWLLSELRGKRPLLPPDLPQTDEIADV  480 (936)
T ss_dssp             HHHHHHHHHHHHTTSSSEEEEECCHHHHHHHHHHHHHHHTSCCSTTSCHHHHHHHHHHHHHCCSCCCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf             46899999997164211356642148999999999986578773337868889999998557888888641003469999


Q ss_pred             HHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHCCHHHHHHCCCE
Q ss_conf             99999998099862137884038990109999999999099999732356579688711499999983069898620791
Q 002698          509 LDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGK  588 (891)
Q Consensus       509 l~~f~~i~~~~~~a~~~yIISmt~~~sDiL~vl~L~k~~g~~~~l~IvPLFETi~DL~~a~~il~~ll~~p~Yr~~l~~~  588 (891)
                      +++|++++++|+++|++||||||+++||||+|++|+|++|+.++|+||||||||+||+|||.||++||++|+||+||+|+
T Consensus       481 l~~~~~i~~~g~~aig~YIISmt~s~sDvL~V~lLak~~g~~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~  560 (936)
T d1jqoa_         481 IGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGK  560 (936)
T ss_dssp             HHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSE
T ss_pred             HHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCC
T ss_conf             99999998517000132031157867889999999997199888773630334999984299999998382888743104


Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCC
Q ss_conf             38997204677752067498999999999999999809939883378988998997145665319998304725430243
Q 002698          589 QEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQG  668 (891)
Q Consensus       589 qeVMlGYSDS~KDgG~laa~W~ly~Aq~~L~~v~~~~gV~l~~FHGRGGsvgRGGGP~~~ailaqP~gs~~g~ir~TeQG  668 (891)
                      ||||||||||||||||+||||+||+||++|+++|++|||+++|||||||||||||||+|+||+|||+||++|++|+||||
T Consensus       561 QeVMlGYSDS~KDgG~laa~W~ly~Aq~~L~~v~~~~gv~l~~FHGRGGsvgRGGGPt~~ai~sqP~gs~~g~ir~TeQG  640 (936)
T d1jqoa_         561 QQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTINGSIRVTVQG  640 (936)
T ss_dssp             EEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHHHHHHTSCTTSCTTEEEEEEEH
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEE
T ss_conf             27775355554225788888899999999999999839638997067886556789768899858898857745887521


Q ss_pred             CHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHC
Q ss_conf             13551009956799999999999997259999999977999999999999999997420398626688741734576207
Q 002698          669 EVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRM  748 (891)
Q Consensus       669 Evi~~kyg~~~~A~r~Le~~~~a~l~~~~~~~~~~~~~~~~~m~~ls~~s~~~Yr~lv~~~p~F~~yF~~aTPi~ei~~L  748 (891)
                      |||++|||+|.+|.+|||++++|++++++.++..+.++|+++|+++|+.|+++||++|+++|+|++||+++||++||+.|
T Consensus       641 EvIs~ky~~~~~a~~~Le~~~aa~l~~~~~~~~~~~~~~~~~~~~ls~~s~~~Yr~lv~~~p~F~~yf~~aTPi~ei~~l  720 (936)
T d1jqoa_         641 EVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEYRSVVVKEARFVEYFRSATPETEYGRM  720 (936)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHSCCGGGGGG
T ss_pred             EEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
T ss_conf             01465216888999999999999996035887789723789999999999999987562797389999987157777545


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf             87888885689999887544502555410000221056389999999980888699999997119139999999999997
Q 002698          749 NIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFA  828 (891)
Q Consensus       749 nIGSRPa~R~~~~~l~dLRAIPWVFaWtQ~R~~lP~WyGvGsAl~~~~~~~~~~~~~L~~my~~wpfF~s~idn~em~la  828 (891)
                      ||||||+||+++++++|||||||||||||+|+|+|||||+|+||+.++++++++++.||+||++||||+++|||++|+|+
T Consensus       721 nIGSRPa~R~~~~~l~dLRAIPWVfsWtQ~R~~lPgWyG~GsAl~~~~~~~~~~~~~l~~my~~wpfF~~~l~n~~m~la  800 (936)
T d1jqoa_         721 NIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRNFQVLKEMYNEWPFFRVTLDLLEMVFA  800 (936)
T ss_dssp             CCSCCC--------CTTCCSHHHHHHHHHTTCCHHHHTTHHHHHHHHHHHCTTHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             68899754778999655676723778988653226875157999999861745599999999709399999999999998


Q ss_pred             HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             03699999997304881105899999999999999999881896522579337899884214
Q 002698          829 KGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVCGANHWSDFRKVIIVISKLRYK  890 (891)
Q Consensus       829 KaD~~Ia~~Y~~l~~~~~~~~i~~~i~~E~~~t~~~vl~itg~~~Ll~~~p~l~~s~~~r~~  890 (891)
                      |+||.||++|+++++|+++++||+.|++||++|+++|++|||++.||+++|++++||++|+.
T Consensus       801 K~d~~ia~~Y~~l~~d~~~~~~~~~i~~E~~~t~~~~l~it~~~~Ll~~~p~l~~si~~R~p  862 (936)
T d1jqoa_         801 KGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLKQGLVLRNP  862 (936)
T ss_dssp             TCCHHHHHHHHHHTSCSTTHHHHHHHHHHHHHHHHHHHHHHTCSSTTSSCHHHHHHHHHHHH
T ss_pred             HHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHH
T ss_conf             31899999999857887799999999999999999999981984142169689999998837

PyMOL of d1jqoa_

>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]}	Back information, alignment and structure

>d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure