Citrus Sinensis ID: 002713
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 889 | 2.2.26 [Sep-21-2011] | |||||||
| Q8L7U5 | 881 | Serine/threonine-protein | yes | no | 0.986 | 0.995 | 0.825 | 0.0 | |
| Q60EX6 | 883 | Serine/threonine-protein | yes | no | 0.974 | 0.980 | 0.783 | 0.0 | |
| Q9SHS7 | 1006 | Serine/threonine-protein | no | no | 0.982 | 0.867 | 0.627 | 0.0 | |
| Q2QM47 | 1009 | Serine/threonine-protein | no | no | 0.989 | 0.872 | 0.613 | 0.0 | |
| Q9SJF0 | 1018 | Serine/threonine-protein | no | no | 0.989 | 0.864 | 0.623 | 0.0 | |
| Q9LR78 | 793 | Serine/threonine-protein | no | no | 0.884 | 0.991 | 0.523 | 0.0 | |
| P48482 | 312 | Serine/threonine-protein | no | no | 0.322 | 0.919 | 0.490 | 2e-77 | |
| P48485 | 312 | Serine/threonine-protein | no | no | 0.323 | 0.923 | 0.491 | 6e-77 | |
| P22198 | 316 | Serine/threonine-protein | N/A | no | 0.327 | 0.920 | 0.478 | 6e-76 | |
| O04856 | 317 | Serine/threonine-protein | N/A | no | 0.327 | 0.917 | 0.478 | 8e-75 |
| >sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1497 bits (3876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/893 (82%), Positives = 802/893 (89%), Gaps = 16/893 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP Y+TLET+WD ++DAPGPRC HTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPQYKTLETFWDDEDDAPGPRCAHTLTAVAATKTHGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+SS PGIRLAGVTN+VH YD+LTRKWTR++PAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 -SSSVPGIRLAGVTNTVHSYDILTRKWTRLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLD+TNDKFKWHRVVVQG GPGPRYGHVMDLVSQRYLV+V+GNDGKR LSD
Sbjct: 120 AGHSTDDLYVLDMTNDKFKWHRVVVQGDGPGPRYGHVMDLVSQRYLVTVTGNDGKRALSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPYVWQRLNP+GDRPSARMYA+ SARSDGMFLLCGGRD GAPL DAYGLLM
Sbjct: 180 AWALDTAQKPYVWQRLNPDGDRPSARMYASGSARSDGMFLLCGGRDTLGAPLGDAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHV+GG LRGGR I+ EA+VAVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVSGGVLRGGRVIDAEASVAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFL 360
LDRNG VTS+R SKG + DPS ELMRRCRH +AS+G+RIY++GGL+G D+LLDDFL
Sbjct: 300 LDRNGQVTSARGSKGQIDQDPSFELMRRCRHGAASVGIRIYVHGGLRG----DVLLDDFL 355
Query: 361 VAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFG---SLSMDK 417
VAENS FQSD++SPLL S+R + + Y P P G PSF LS+D+
Sbjct: 356 VAENSTFQSDISSPLLASDRT-----QQSSTPRFSYAARP-PSG-SEPSFSMSEGLSLDE 408
Query: 418 NSMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRL 477
NS+EKL EASAAEAE A++VW+AAQ + EE S SD +S + E+T+DG+ E DVRL
Sbjct: 409 NSLEKLTEASAAEAEVASSVWRAAQLGAGTLDEEPSTSDASSPIVESTTDGTANEGDVRL 468
Query: 478 HPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNN-ELSYPTKKFTRQRSPQGLHK 536
HPRAVVVAKE VG+LGGMVRQLSLDQF+NESRRM+P+NN ++ PTKKFTRQ+SPQGLHK
Sbjct: 469 HPRAVVVAKETVGSLGGMVRQLSLDQFQNESRRMVPMNNSDVPQPTKKFTRQKSPQGLHK 528
Query: 537 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 596
K+I+ LLRPRNWK P NR+FFLDSYEVGELCYAAEQIFM E TVLQL+AP+KVFGDLHGQ
Sbjct: 529 KVIAALLRPRNWKPPGNRKFFLDSYEVGELCYAAEQIFMHEQTVLQLKAPIKVFGDLHGQ 588
Query: 597 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 656
FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR
Sbjct: 589 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 648
Query: 657 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 716
GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFN LPLAALIE KIICMHGGIGR
Sbjct: 649 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNYLPLAALIENKIICMHGGIGR 708
Query: 717 SIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
SI +VEQIEK+ERPITMDAGS++LMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV++
Sbjct: 709 SISTVEQIEKIERPITMDAGSLVLMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVTE 768
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLV+VPK
Sbjct: 769 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVIVPK 828
Query: 837 LIHPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
LIHPLPPP+ SPE SPE DD WMQELNIQRPPTPTRGRPQPD DR+SLAYI
Sbjct: 829 LIHPLPPPILSPENSPEHSGDDAWMQELNIQRPPTPTRGRPQPDFDRSSLAYI 881
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6 |
| >sp|Q60EX6|BSL1_ORYSJ Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica GN=BSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1391 bits (3601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 700/893 (78%), Positives = 770/893 (86%), Gaps = 27/893 (3%)
Query: 6 WLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSA 65
W+ PAP+YR +E + +D+PG RCGH+LT VA TK GPRLILFGGATAIE GA+S
Sbjct: 9 WVVPAPAYREVEGWEGAGDDSPGFRCGHSLTVVAPTKGHGPRLILFGGATAIEAGASSGM 68
Query: 66 PGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHST 125
PGIRLAGVTNSVH YDV TR+WTR+ PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHST
Sbjct: 69 PGIRLAGVTNSVHSYDVDTRRWTRLHPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHST 128
Query: 126 DDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALD 185
DDLYVLDLTNDKFKWHRVVVQG GPGPRYGH MDLV+QRYLV+VSGNDGKRVLSDAWALD
Sbjct: 129 DDLYVLDLTNDKFKWHRVVVQGAGPGPRYGHCMDLVAQRYLVTVSGNDGKRVLSDAWALD 188
Query: 186 TAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQ 245
TAQKPY WQ+LNP+GDRPSARMYATASAR+DGM LLCGGRDASG PL+DAYGLLMH +GQ
Sbjct: 189 TAQKPYRWQKLNPDGDRPSARMYATASARTDGMLLLCGGRDASGMPLSDAYGLLMHTSGQ 248
Query: 246 WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305
WEWTLAPGV+PSPRYQHAAVFVGARLHVTGG LRGGRAIEGE A+AVLDTAAGVWLDRNG
Sbjct: 249 WEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAIEGEGAIAVLDTAAGVWLDRNG 308
Query: 306 LVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFLVAENS 365
+VTS RT K +HD S +L+RRCRHA+AS+G +IYIYGGL+G DILLDDFLVA+N+
Sbjct: 309 IVTS-RTLKSSHDHDASSDLLRRCRHAAASVGTQIYIYGGLRG----DILLDDFLVADNA 363
Query: 366 PFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFGSLSMDKNSMEKLRE 425
P QS+ S + +R P N+ + +PT + S DK S++ L +
Sbjct: 364 PIQSEFTSSMY--DRVPR--AENQNRNHNFNSDSPTTNN---------STDKKSIDMLTQ 410
Query: 426 ASAAEAEAANAVWQAAQAASAVPPEET--------SVSDDNSQVAEATSDGSDTEADVRL 477
ASAAEAEA +AVW+AAQ AS E++ S + S + E DG E DV+L
Sbjct: 411 ASAAEAEAVSAVWRAAQEASHASSEDSLSEGIGSESPLSETSPMPEDLDDGGSLEPDVKL 470
Query: 478 HPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKK-FTRQRSPQGLHK 536
H RAVVV+KEAVG+LG +VRQLSLDQFENESRRM P +N+ SYP KK RQRSPQGLHK
Sbjct: 471 HSRAVVVSKEAVGDLGCLVRQLSLDQFENESRRMHPSSNDQSYPAKKALNRQRSPQGLHK 530
Query: 537 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 596
K+IS LL+PRNW+APA R FFLDSYEVGELCYAAEQIFMQEPTVLQL+AP+KVFGDLHGQ
Sbjct: 531 KVISFLLKPRNWRAPAERAFFLDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQ 590
Query: 597 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 656
FGDLMRLFDEYG+PSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR
Sbjct: 591 FGDLMRLFDEYGYPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 650
Query: 657 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 716
GNHEAADINALFGFRLECIERMGE+DGIWAWTRFNQLFN LPLAA+IEKKIICMHGGIGR
Sbjct: 651 GNHEAADINALFGFRLECIERMGESDGIWAWTRFNQLFNYLPLAAMIEKKIICMHGGIGR 710
Query: 717 SIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
SI+++EQIEKLERPITMD GSIILMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV++
Sbjct: 711 SINTIEQIEKLERPITMDVGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTE 770
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
FCKRN+LQLIIRAHECVMDGFERFA GQLITLFSATNYCGTANNAGAILVVGRGLV+VPK
Sbjct: 771 FCKRNRLQLIIRAHECVMDGFERFAHGQLITLFSATNYCGTANNAGAILVVGRGLVIVPK 830
Query: 837 LIHPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
LIHPLPPP+ SPE+SPER +D WMQELNIQRPPTPTRGRPQ DRNSLAYI
Sbjct: 831 LIHPLPPPVNSPESSPERAMDATWMQELNIQRPPTPTRGRPQSASDRNSLAYI 883
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/940 (62%), Positives = 677/940 (72%), Gaps = 67/940 (7%)
Query: 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAA------TKTTGPRLILFGGATAIEGGA-- 61
AP+Y + + ED PGPRCGHTLTAV A + GPRLILFGGATA+EG +
Sbjct: 74 APTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPRLILFGGATALEGNSGG 133
Query: 62 -----TSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQG 116
++ + GIRLAG T VH YDVL+ KW+R+ P GEPPSPRAAH A AVGTMVV QG
Sbjct: 134 TGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPRAAHVATAVGTMVVIQG 193
Query: 117 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR 176
GIGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGHVM LV QRYL+++ GNDGKR
Sbjct: 194 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 253
Query: 177 VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236
L+D WALDTA KPY W++L PEG+ P MYATASARSDG+ LLCGGRDA+ PLA AY
Sbjct: 254 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAY 313
Query: 237 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTA 296
GL HR+G+WEW +APGV+PS RYQHAAVFV ARLHV+GGAL GGR +E ++VAVLDTA
Sbjct: 314 GLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 373
Query: 297 AGVWLDRNGLVTSSRTSKGHGEH---DPSLELMRRCRHASASIGVRIYIYGGLKGAFCAD 353
AGVW D +VTS RT + + D S+EL RRCRHA+A++G I+IYGGL+G
Sbjct: 374 AGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGG---- 429
Query: 354 ILLDDFLVAE---------------------NSPFQSDVNSPLLTSERAPTHTGSKVNQT 392
+LLDD LVAE N+P + ER S +
Sbjct: 430 VLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDERTGELPESAPDAV 489
Query: 393 NLGYVTTPTPDG-------LHSPSFGSLSMDKNSMEKLREASAAEAEAANAVWQAAQAAS 445
LG P +G + + +E L EASAAEAEA +A AA+A
Sbjct: 490 VLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEAEAISATLAAAKARQ 549
Query: 446 AVPPEETSVSDDNSQVAEATSDG---------------SDTEADVRLHPRAVVVAKEAVG 490
E D + AEAT G S A VRLH RAVVVA E G
Sbjct: 550 VNGEVELP---DRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHHRAVVVAAETGG 606
Query: 491 NLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKF-TRQRSPQGLHKKIISTLLRPRNWK 549
LGGMVRQLS+DQFENE RR+ E + +K RQ S + KK+++ LL+PR WK
Sbjct: 607 ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLLKPRGWK 666
Query: 550 APANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGF 609
P R+FFLD E+ +LC +AE+IF EPTVLQL+AP+K+FGDLHGQFGDLMRLFDEYG
Sbjct: 667 PPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGS 726
Query: 610 PSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFG 669
PSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALK+EY NVHLIRGNHEAADINALFG
Sbjct: 727 PSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGNHEAADINALFG 786
Query: 670 FRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLER 729
FR+ECIERMGE DGIW W R N+LFN LPLAALIEKKIICMHGGIGRSI+ VEQIE ++R
Sbjct: 787 FRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQR 846
Query: 730 PITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRA 789
PITM+AGSI+LMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV +FC N LQLI+RA
Sbjct: 847 PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA 906
Query: 790 HECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPE 849
HECVMDGFERFAQG LITLFSATNYCGTANNAGAILV+GR LVVVPKLIHPLPP + SPE
Sbjct: 907 HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAITSPE 966
Query: 850 TSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
TSPER I+D WMQELN+ RPPTPTRGRPQ DR SLA+I
Sbjct: 967 TSPERHIEDTWMQELNVNRPPTPTRGRPQNPNDRGSLAWI 1006
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q2QM47|BSL2_ORYSJ Serine/threonine-protein phosphatase BSL2 homolog OS=Oryza sativa subsp. japonica GN=BSL2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/938 (61%), Positives = 671/938 (71%), Gaps = 58/938 (6%)
Query: 9 PAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKT------TGPRLILFGGATAIEGGA- 61
PAP Y + + ED PG RCGHTLTAV A GPRLILFGGATA+EG +
Sbjct: 73 PAPGYTVVNAAMEKKEDGPGCRCGHTLTAVPAVGEEGAPGYVGPRLILFGGATALEGNSA 132
Query: 62 ----TSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGG 117
++ + GIRLAG T VH YDV + KW+R+ P GEPPSPRAAH A AVGTMVV QGG
Sbjct: 133 TPPSSAGSAGIRLAGATADVHCYDVSSNKWSRLTPVGEPPSPRAAHVATAVGTMVVIQGG 192
Query: 118 IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRV 177
IGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGHVM LV QR+L+++ GNDGKR
Sbjct: 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRFLLTIGGNDGKRP 252
Query: 178 LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYG 237
L+D WALDTA KPY W++L PEG+ P MYATASARSDG+ LLCGGRDA+ PLA AYG
Sbjct: 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYG 312
Query: 238 LLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAA 297
L HR+G+WEW +APGV+PSPRYQHAAVFV ARLHV+GGAL GGR +E ++VAVLDTAA
Sbjct: 313 LAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372
Query: 298 GVWLDRNGLVTSSRTSKGHGEH---DPSLELMRRCRHASASIGVRIYIYGGLKGAFCAD- 353
GVW D +VT+ RT + + D S+EL RRCRHA+A++G IY+YGGL+G D
Sbjct: 373 GVWCDTKSVVTTPRTGRYSADAAGGDASVELTRRCRHAAAAVGDMIYVYGGLRGGVLLDD 432
Query: 354 -ILLDDFLVAENSPFQSDVNSPLLTSE----RAPTHTGSKVNQTNLGYVTTPTPDG---- 404
++ +D AE + + + S+ R P QT T +PDG
Sbjct: 433 LLVAEDLAAAETTNAANQAAAIAAASDIQAGREPGRYAYNDEQTGQPATIT-SPDGAVVL 491
Query: 405 ---LHSPSFGSLSMD----------KNSMEK----------------LREASAAEAEAAN 435
+ +P G + D + M K +A +A N
Sbjct: 492 GTPVAAPVNGDMYTDISPENAVIQGQRRMSKGVDYLVEASAAEAEAISATLAAVKARQVN 551
Query: 436 AVWQAAQAASAVPPEETSVSDDNSQVAE--ATSDGSDTEADVRLHPRAVVVAKEAVGNLG 493
+ + P SV + S + A S+ S VRLH RAVVVA E G LG
Sbjct: 552 GEAEHSPDREQSPDATPSVKQNASLIKPDYALSNNSTPPPGVRLHHRAVVVAAETGGALG 611
Query: 494 GMVRQLSLDQFENESRRMIPLNNELSYPTKKF-TRQRSPQGLHKKIISTLLRPRNWKAPA 552
GMVRQLS+DQFENE RR+I E + +K RQ S + KK+I++LL+PR WK P
Sbjct: 612 GMVRQLSIDQFENEGRRVIYGTPESATAARKLLDRQMSINSVPKKVIASLLKPRGWKPPV 671
Query: 553 NRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPST 612
R+FFLD E+ +LC +AE+IF EP+VLQL+AP+K+FGDLHGQFGDLMRLFDEYG PST
Sbjct: 672 RRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPST 731
Query: 613 AGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRL 672
AGDI YIDYLFLGDYVDRGQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+
Sbjct: 732 AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRGNHEAADINALFGFRI 791
Query: 673 ECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPIT 732
ECIERMGE DGIW W R N+LFN LPLAALIEKKIICMHGGIGRSI+ VEQIE L+RPIT
Sbjct: 792 ECIERMGERDGIWTWHRMNRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPIT 851
Query: 733 MDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHEC 792
M+AGS++LMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV +FC N LQLI+RAHEC
Sbjct: 852 MEAGSVVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 911
Query: 793 VMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSP 852
VMDGFERFAQG LITLFSATNYCGTANNAGAILV+GR LVVVPKLIHPLPP + SPETSP
Sbjct: 912 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAITSPETSP 971
Query: 853 ERVIDDMWMQELNIQRPPTPTRGRPQ-PDLDRNSLAYI 889
E ++D WMQELN RPPTPTRGRPQ + DR SLA+I
Sbjct: 972 EHHLEDTWMQELNANRPPTPTRGRPQAANNDRGSLAWI 1009
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2 OS=Arabidopsis thaliana GN=BSL2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/934 (62%), Positives = 671/934 (71%), Gaps = 54/934 (5%)
Query: 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAATKT------TGPRLILFGGATAIEGGA-- 61
AP+Y ++ D ED PGPRCGHTLTAV A GPRL+LFGGATA+EG +
Sbjct: 85 APTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGTPGYIGPRLVLFGGATALEGNSGG 144
Query: 62 -----TSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQG 116
++ + GIRLAG T VH YDVL+ KWTR+ P GEPP+PRAAH A AVGTMVV QG
Sbjct: 145 TGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTPFGEPPTPRAAHVATAVGTMVVIQG 204
Query: 117 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR 176
GIGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGHVM LV QRYL+++ GNDGKR
Sbjct: 205 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 264
Query: 177 VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236
L+D WALDTA KPY W++L PEG+ P MYATASARSDG+ LLCGGRDA+ PLA AY
Sbjct: 265 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAY 324
Query: 237 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTA 296
GL HR+G+WEW +APGV+PS RYQHAAVFV ARLHV+GGAL GGR +E ++VAVLDTA
Sbjct: 325 GLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 384
Query: 297 AGVWLDRNGLVTSSRTSKGHGEH---DPSLELMRRCRHASASIGVRIYIYGGLKGAFCAD 353
AGVW D +VTS RT + + D S+EL RRCRHA+A++G I+IYGGL+G D
Sbjct: 385 AGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 444
Query: 354 ILL--DDFLVAENS------PFQSDVNSPL--------LTSERAPTHTGSKVN-QTNLGY 396
LL +D AE + + NSP + ER + S + LG
Sbjct: 445 DLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGRYGFSDERNRELSESAADGAVVLGS 504
Query: 397 VTTPTPDG-LH---SPSFGSLSMDKNSMEKLREASAAEAEAANAVWQAAQAASAVPPEET 452
P +G +H SP L + + + + A A A A+ AA A
Sbjct: 505 PVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLVEASAAEAEAISATLAAAKARQVNGE 564
Query: 453 SVSDDNSQVAEATSDG---------------SDTEADVRLHPRAVVVAKEAVGNLGGMVR 497
D AEAT G S T A +RLH RAVVVA E G LGGMVR
Sbjct: 565 VELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTPAGIRLHHRAVVVAAETGGALGGMVR 624
Query: 498 QLSLDQFENESRRMIPLNNELSYPTKKF-TRQRSPQGLHKKIISTLLRPRNWKAPANRRF 556
QLS+DQFENE RR+ E + +K RQ S + KK+I+ LL+PR WK P R+F
Sbjct: 625 QLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQF 684
Query: 557 FLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDI 616
FLD E+ +LC +AE+IF EPTVLQL+AP+K+FGDLHGQFGDLMRLFDEYG PSTAGDI
Sbjct: 685 FLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI 744
Query: 617 TYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIE 676
+YIDYLFLGDYVDRGQHSLETI+LLLALK+EY NVHLIRGNHEAADINALFGFR+ECIE
Sbjct: 745 SYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHNVHLIRGNHEAADINALFGFRIECIE 804
Query: 677 RMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAG 736
RMGE DGIW W R N+LFN LPLAA IEKKIICMHGGIGRSI+ VEQIE ++RPITM+AG
Sbjct: 805 RMGERDGIWVWHRINRLFNWLPLAASIEKKIICMHGGIGRSINHVEQIENIQRPITMEAG 864
Query: 737 SIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDG 796
SI+LMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV +FC N LQLI+RAHECVMDG
Sbjct: 865 SIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDG 924
Query: 797 FERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVI 856
FERFAQG LITLFSATNYCGTANNAGAILV+GR LVVVPKLIHPLPP L SPETSPER I
Sbjct: 925 FERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSSPETSPERHI 984
Query: 857 DDMWMQELNIQRPPTPTRGRPQPDLDR-NSLAYI 889
+D WMQELN RP TPTRGRPQ DR SLA++
Sbjct: 985 EDTWMQELNANRPATPTRGRPQNSNDRGGSLAWM 1018
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q9LR78|BSU1_ARATH Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana GN=BSU1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/873 (52%), Positives = 585/873 (67%), Gaps = 87/873 (9%)
Query: 4 KPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATS 63
+ + +P+PSY +++T++DTDED PGPRCGHTLTAV + +LILFGG+T S
Sbjct: 5 QSYQYPSPSYESIQTFYDTDEDWPGPRCGHTLTAVFVNNSH--QLILFGGSTTAVANHNS 62
Query: 64 SAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGH 123
S P I L GVTNSVH +DVLTRKWTR+ P G+ PSPRA HAAA GT+++ QGGIGP+G
Sbjct: 63 SLPEISLDGVTNSVHSFDVLTRKWTRLNPIGDVPSPRACHAAALYGTLILIQGGIGPSGP 122
Query: 124 STDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWA 183
S D+Y+LD+TN+K W + +V G+ P PRYGHVMD+ +QR+LV SGN+G +L D WA
Sbjct: 123 SDGDVYMLDMTNNK--WIKFLVGGETPSPRYGHVMDIAAQRWLVIFSGNNGNEILDDTWA 180
Query: 184 LDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243
LDT + P+ W RLNP G++PS RMYA+ S+R DG+FLLCGG D SG L D YGL M +
Sbjct: 181 LDT-RGPFSWDRLNPSGNQPSGRMYASGSSREDGIFLLCGGIDHSGVTLGDTYGLKMDSD 239
Query: 244 GQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303
W T P VAPSPRYQH AVF G++LHV GG L R I+GEA VAVLDT G W+D
Sbjct: 240 NVW--TPVPAVAPSPRYQHTAVFGGSKLHVIGGILNRARLIDGEAVVAVLDTETGEWVDT 297
Query: 304 NGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFLVAE 363
N TS+ + ++ +LMRRC HA+AS G +Y++GG++ D+LLDD LVAE
Sbjct: 298 NQPETSASGANRQNQY----QLMRRCHHAAASFGSHLYVHGGIR----EDVLLDDLLVAE 349
Query: 364 NSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFGSLSMDKNSMEKL 423
S QS ++P P+ + ++ + +D M++
Sbjct: 350 TS--QS----------------------------SSPEPEEDNPDNY--MLLDDYLMDEP 377
Query: 424 REASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRAVV 483
+ S+ E EA++ + ++ S + + + + + + A D S E V L A
Sbjct: 378 KPLSS-EPEASSFI---MRSTSEIAMDRLAEAHNLPTIENAFYD-SAIEGYVPLQHGA-- 430
Query: 484 VAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIISTLL 543
E VGN GG+VR SLDQ S Q LHKK+ISTLL
Sbjct: 431 ---ETVGNRGGLVRTASLDQ--------------------------STQDLHKKVISTLL 461
Query: 544 RPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRL 603
RP+ W PANR FFL EV LC E+IFM EPT+LQL+ P+KVFGD+HGQ+GDLMRL
Sbjct: 462 RPKTWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKVPIKVFGDIHGQYGDLMRL 521
Query: 604 FDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAAD 663
F EYG PS GDIT+IDYLFLGDYVDRGQHSLE I LL ALKIEYP+N+HLIRGNHE+
Sbjct: 522 FHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEYPKNIHLIRGNHESLA 581
Query: 664 INALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQ 723
+N ++GF EC ERMGE+ G AW + NQ+F+ LPLAAL+EKK++C+HGGIGR++ ++E+
Sbjct: 582 MNRIYGFLTECEERMGESYGFEAWLKINQVFDYLPLAALLEKKVLCVHGGIGRAV-TIEE 640
Query: 724 IEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKL 783
IE +ERP D GS++L D+LWSDPT ND++ G+ NARG G+V+FGPD V F +RN L
Sbjct: 641 IENIERPAFPDTGSMVLKDILWSDPTMNDTVLGIVDNARGEGVVSFGPDIVKAFLERNGL 700
Query: 784 QLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP 843
++I+RAHECV+DGFERFA G+LIT+FSATNYCGTA NAGAILV+GR +V+ PKLIHP PP
Sbjct: 701 EMILRAHECVIDGFERFADGRLITVFSATNYCGTAQNAGAILVIGRDMVIYPKLIHPHPP 760
Query: 844 PLQSPETSPERVIDDMWMQELNIQRPPTPTRGR 876
P+ S E E D WMQELNI+ PPTP RG
Sbjct: 761 PISSSE---EDYTDKAWMQELNIEMPPTPARGE 790
|
Phosphatase that acts as a positive regulator of brassinolide signaling. Dephosphorylates BES1, a transcription factor that regulates the expression of brassinolide-response genes, thereby playing an important role in the regulation of response to brassinosteroids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48482|PP12_ARATH Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 207/304 (68%), Gaps = 17/304 (5%)
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
II LL RN K P ++ L+ E+ +LC + +IF+Q+P +L+L AP+K+ GD+HGQ+
Sbjct: 17 IIRRLLDYRNPK-PGTKQAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 598 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 657
DL+RLF+ GFP TA +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 658 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 717
NHE A IN ++GF EC R + W F FNCLP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRF----SVRLWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 718 IHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
+ +VEQI+ ++RP + D+G +L DLLWSDP+++ ++G N RG TFGPD+V++
Sbjct: 186 LTNVEQIKNIKRPTDVPDSG--LLCDLLWSDPSKD--VKGWGMNDRGVS-YTFGPDKVAE 240
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
F +N + LI RAH+ V DG+E FA QL+T+FSA NYCG +NAGA++ V L+ +
Sbjct: 241 FLIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQ 300
Query: 837 LIHP 840
++ P
Sbjct: 301 ILKP 304
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48485|PP15_ARATH Serine/threonine-protein phosphatase PP1 isozyme 5 OS=Arabidopsis thaliana GN=TOPP5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 289 bits (740), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 207/305 (67%), Gaps = 17/305 (5%)
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
II LL RN KA + DS E+ +LC+ + +IF+Q+P +L+L APVK+ GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKAGTKQAMLNDS-EIRQLCFVSREIFLQQPCLLELAAPVKICGDIHGQY 75
Query: 598 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 657
DL+RLF+ GFP A +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 76 SDLLRLFEYGGFPPAA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 658 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 717
NHE A IN ++GF EC R + W F FNCLP+AA+I++KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRF----NVKLWKVFTDTFNCLPVAAVIDEKILCMHGGLSPE 185
Query: 718 IHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
+ +VEQI+ +ERP + DAG +L DLLWSDP+++ ++G N RG TFG D+V++
Sbjct: 186 LINVEQIKNIERPTDVPDAG--LLCDLLWSDPSKD--VKGWGMNDRGVS-YTFGADKVAE 240
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
F +N + L+ RAH+ V DG+E FA QL+T+FSA NYCG +NAGA++ V L+ +
Sbjct: 241 FLIKNDMDLVCRAHQVVEDGYEFFADRQLVTMFSAPNYCGEFDNAGALMSVDESLMCSFQ 300
Query: 837 LIHPL 841
++ P+
Sbjct: 301 ILKPV 305
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P22198|PP1_MAIZE Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 286 bits (731), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 148/309 (47%), Positives = 203/309 (65%), Gaps = 18/309 (5%)
Query: 533 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGD 592
L +I LL +N K N + L E+ +LC AA++IF+Q+P +L+L AP+K+ GD
Sbjct: 4 ALLDDVIRRLLEVKNLKPGKNAQ--LSESEIKQLCAAAKEIFLQQPNLLELEAPIKICGD 61
Query: 593 LHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENV 652
+HGQ+ DL+RLFD G+P A +YLFLGDYVDRG+ SLETI LLLA K++YPEN
Sbjct: 62 VHGQYSDLLRLFDYGGYPPQA------NYLFLGDYVDRGKQSLETICLLLAYKVKYPENF 115
Query: 653 HLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 712
L+RGNHE A +N ++GF EC R + W F FNCLP++ALI++KI+CMHG
Sbjct: 116 FLLRGNHECASVNRIYGFYDECKRRF----SVKLWKTFTDCFNCLPVSALIDEKILCMHG 171
Query: 713 GIGRSIHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGP 771
G+ ++ +EQI L RP + D G +L DLLWSDP+ + G N RG TFGP
Sbjct: 172 GLSPELNKLEQILNLNRPTDVPDTG--LLCDLLWSDPS--NEATGWAINDRGVSF-TFGP 226
Query: 772 DRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGL 831
D+VS+F +++ L LI RAH+ V DG+E FA QL+T+FSA NYCG +NAGA++ V L
Sbjct: 227 DKVSEFLEKHDLDLICRAHQVVEDGYEFFASRQLVTIFSAPNYCGEFDNAGAMMSVDDTL 286
Query: 832 VVVPKLIHP 840
+ +++ P
Sbjct: 287 MCSFQILKP 295
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|O04856|PP11_TOBAC Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 282 bits (722), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 148/309 (47%), Positives = 206/309 (66%), Gaps = 18/309 (5%)
Query: 533 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGD 592
G+ II+ LL RN A R+ L E+ LC A+ +IF+Q+P +L L+ P+K+ GD
Sbjct: 18 GVLDDIINRLLEFRN--ARTVRQVQLSEAEIRSLCSASREIFLQQPNLLDLKPPIKICGD 75
Query: 593 LHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENV 652
+HGQ+GDL+RLF+ GFP A +YLFLGDYVDRG+ SLETI LLLA KI+YPEN
Sbjct: 76 IHGQYGDLLRLFEYGGFPPEA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENF 129
Query: 653 HLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 712
L+RGNHE A IN ++GF EC R + W F + FNCLP+AALI++KI+CMHG
Sbjct: 130 FLLRGNHECASINRIYGFYDECKRRF----NVKLWKCFTECFNCLPVAALIDEKILCMHG 185
Query: 713 GIGRSIHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGP 771
G+ + +++QI L RP + D+G +L DLLWSDP+ ++G N RG TFGP
Sbjct: 186 GLSPVLTNLDQIRNLPRPTDVPDSG--LLCDLLWSDPSR--EVKGWGMNDRGVS-YTFGP 240
Query: 772 DRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGL 831
D+V++F ++ + L+ RAH+ V DG+E FA+ QL+T+FSA NYCG +NAGA++ V L
Sbjct: 241 DKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDESL 300
Query: 832 VVVPKLIHP 840
+ +++ P
Sbjct: 301 MCSFQILKP 309
|
Nicotiana tabacum (taxid: 4097) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 889 | ||||||
| 359479775 | 888 | PREDICTED: serine/threonine-protein phos | 0.993 | 0.994 | 0.913 | 0.0 | |
| 255559380 | 885 | bsu-protein phosphatase, putative [Ricin | 0.995 | 1.0 | 0.892 | 0.0 | |
| 224131276 | 892 | predicted protein [Populus trichocarpa] | 0.994 | 0.991 | 0.891 | 0.0 | |
| 449444661 | 905 | PREDICTED: LOW QUALITY PROTEIN: serine/t | 0.991 | 0.973 | 0.868 | 0.0 | |
| 224064780 | 890 | predicted protein [Populus trichocarpa] | 0.994 | 0.993 | 0.889 | 0.0 | |
| 341657648 | 888 | serine/threonine-protein phosphatase [Ca | 0.993 | 0.994 | 0.864 | 0.0 | |
| 356500242 | 881 | PREDICTED: serine/threonine-protein phos | 0.988 | 0.997 | 0.883 | 0.0 | |
| 356535611 | 881 | PREDICTED: serine/threonine-protein phos | 0.988 | 0.997 | 0.879 | 0.0 | |
| 427199335 | 887 | kelch repeat-containing serine/threonine | 0.995 | 0.997 | 0.904 | 0.0 | |
| 395133374 | 878 | Ser/Thr phosphatase-containing Kelch rep | 0.984 | 0.996 | 0.867 | 0.0 |
| >gi|359479775|ref|XP_002270638.2| PREDICTED: serine/threonine-protein phosphatase BSL1-like [Vitis vinifera] gi|296086652|emb|CBI32287.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1625 bits (4208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 812/889 (91%), Positives = 852/889 (95%), Gaps = 6/889 (0%)
Query: 3 AKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGAT 62
+KPWL+PAP+YRTLE+YWDTD+DAPGPRCGHTLTA+A TKT GPRLILFGGATAIEGGA+
Sbjct: 4 SKPWLYPAPTYRTLESYWDTDDDAPGPRCGHTLTAIAPTKTHGPRLILFGGATAIEGGAS 63
Query: 63 SSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAG 122
SSAPGIRLAGVTNSVH YDVLTRKWTR+RPAGEPPS RAAHAAAAVGTMVVFQGGIGPAG
Sbjct: 64 SSAPGIRLAGVTNSVHSYDVLTRKWTRLRPAGEPPSVRAAHAAAAVGTMVVFQGGIGPAG 123
Query: 123 HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAW 182
HSTDDLYVLDLTNDK+KWHRVVVQGQGPGPRYGHV+DLV+QRYLV+VSGNDGKRVLSDAW
Sbjct: 124 HSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVIDLVAQRYLVTVSGNDGKRVLSDAW 183
Query: 183 ALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHR 242
ALDTAQKPY WQRLNPEGDRPSARMYATASARSDGMFLLCGGRD+SGAPLADAYGLLMHR
Sbjct: 184 ALDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHR 243
Query: 243 NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302
NGQWEWTLAPGV+PSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD
Sbjct: 244 NGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 303
Query: 303 RNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFLVA 362
RNGLVTS R +KGH E+DPSLELMRRCRHA+AS+GVRIYIYGGLKG D+LLDDFL+A
Sbjct: 304 RNGLVTSPRINKGHTEYDPSLELMRRCRHAAASVGVRIYIYGGLKG----DMLLDDFLIA 359
Query: 363 ENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLG-YVTTPTPDG-LHSPSFGSLSMDKNSM 420
ENS FQSD+NSP+LTS+RA T T K+NQ+N Y TTPTPDG L PS G+ SMDK+SM
Sbjct: 360 ENSAFQSDINSPILTSDRAATITSPKLNQSNANLYGTTPTPDGRLEVPSSGAASMDKSSM 419
Query: 421 EKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPR 480
EKL EASAAEAEA +AVWQA QAASAVP +ETSVSDDNSQ AE TSDGSDTEADVRLHPR
Sbjct: 420 EKLAEASAAEAEAVSAVWQAMQAASAVPSDETSVSDDNSQAAETTSDGSDTEADVRLHPR 479
Query: 481 AVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIIS 540
AVVVAKEAVGNLGGMVRQLSLDQFENESRRM+P+NN+LSYPT+KFTRQ+SPQGLHKKIIS
Sbjct: 480 AVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPMNNDLSYPTRKFTRQKSPQGLHKKIIS 539
Query: 541 TLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDL 600
TLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+AP+KVFGDLHGQFGDL
Sbjct: 540 TLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPIKVFGDLHGQFGDL 599
Query: 601 MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 660
MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE
Sbjct: 600 MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 659
Query: 661 AADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHS 720
AADINALFGFRLECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSI S
Sbjct: 660 AADINALFGFRLECIERMGESDGIWAWTRFNQLFNFLPLAALIEKKIICMHGGIGRSISS 719
Query: 721 VEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKR 780
VEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV+DFCK+
Sbjct: 720 VEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVTDFCKK 779
Query: 781 NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 840
NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP
Sbjct: 780 NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 839
Query: 841 LPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
LPPPLQSPETSPER +DD WMQELNIQRPPTPTRGRPQPDLDRNSLAYI
Sbjct: 840 LPPPLQSPETSPERTVDDTWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 888
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255559380|ref|XP_002520710.1| bsu-protein phosphatase, putative [Ricinus communis] gi|223540095|gb|EEF41672.1| bsu-protein phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1591 bits (4119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/889 (89%), Positives = 835/889 (93%), Gaps = 4/889 (0%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP+YR LETYWDTDEDAPGPRCGHTLTAVAAT T GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPTYRPLETYWDTDEDAPGPRCGHTLTAVAATNTHGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+SSAPGIRLAGVTNSVH YDVLTRKWTR+RPAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 GSSSAPGIRLAGVTNSVHSYDVLTRKWTRMRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLV+QR+LV+VSGNDGKRVLSD
Sbjct: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRFLVTVSGNDGKRVLSD 180
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPY WQRLNPEGDRP+ARMYATASARSDGMFLLCGGRD+SG L DAYGLLM
Sbjct: 181 AWALDTAQKPYAWQRLNPEGDRPTARMYATASARSDGMFLLCGGRDSSGMALGDAYGLLM 240
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGV+PS RYQHAAVFVGARLHVTGG L+GGR++E EAAVAVLDTAAGVW
Sbjct: 241 HRNGQWEWTLAPGVSPSQRYQHAAVFVGARLHVTGGVLKGGRSVESEAAVAVLDTAAGVW 300
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFL 360
LD+NGLVTS +TSKGH E+D SLE MRRCRHA+AS+GVRIY+YGGL+G D+LLDDFL
Sbjct: 301 LDKNGLVTSPKTSKGHVEYDSSLEQMRRCRHAAASVGVRIYVYGGLRG----DVLLDDFL 356
Query: 361 VAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFGSLSMDKNSM 420
VAENS FQSD+NS +LTSERA T T +++N ++L T T GL PS G +SMDKNSM
Sbjct: 357 VAENSQFQSDINSSVLTSERASTITSARINHSSLNPYDTITDGGLEFPSSGGISMDKNSM 416
Query: 421 EKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPR 480
EKLREASAAEAE ANAVWQAAQAAS EETS SDDNSQ AEATSDGSDTEADVRLH R
Sbjct: 417 EKLREASAAEAEVANAVWQAAQAASTNSAEETSASDDNSQAAEATSDGSDTEADVRLHSR 476
Query: 481 AVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIIS 540
AVVVAKEAVG+LGG+VRQLSLDQFENESRRMIP+N + YP +KF RQ+SPQGLHKKIIS
Sbjct: 477 AVVVAKEAVGSLGGLVRQLSLDQFENESRRMIPMNTDTPYPARKFARQKSPQGLHKKIIS 536
Query: 541 TLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDL 600
TLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+APVKVFGDLHGQFGDL
Sbjct: 537 TLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDL 596
Query: 601 MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 660
MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE
Sbjct: 597 MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656
Query: 661 AADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHS 720
AADINALFGFRLECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSIHS
Sbjct: 657 AADINALFGFRLECIERMGESDGIWAWTRFNQLFNFLPLAALIEKKIICMHGGIGRSIHS 716
Query: 721 VEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKR 780
VEQIEK+ERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV+DFCK+
Sbjct: 717 VEQIEKIERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVTDFCKK 776
Query: 781 NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 840
NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP
Sbjct: 777 NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 836
Query: 841 LPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
LPPPLQSPETSPERV+DD WMQELNIQRPPTPTRGRPQPDLDR+SLAYI
Sbjct: 837 LPPPLQSPETSPERVMDDTWMQELNIQRPPTPTRGRPQPDLDRSSLAYI 885
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131276|ref|XP_002321044.1| predicted protein [Populus trichocarpa] gi|222861817|gb|EEE99359.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1591 bits (4119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 800/897 (89%), Positives = 837/897 (93%), Gaps = 13/897 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP+YRTLETYWD+D+DAPG RC HTLTAVAATK+ GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPTYRTLETYWDSDDDAPGSRCAHTLTAVAATKSQGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
A SSAPGIRLAGVTNSVH YDVLTRKWTR++PAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 A-SSAPGIRLAGVTNSVHSYDVLTRKWTRVQPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH MDLV+QRYLV+VSGNDGKRVLSD
Sbjct: 120 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVLSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPYVWQRLNPEGDRPSAR+YATASARSDGMFLLCGGRD+SG PL DAYGLLM
Sbjct: 180 AWALDTAQKPYVWQRLNPEGDRPSARVYATASARSDGMFLLCGGRDSSGTPLGDAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVA-------VL 293
HRNGQWEWTLAPGV+PS RYQHAAVFVGARLHVTGG+L+GGR +EGEAAVA +L
Sbjct: 240 HRNGQWEWTLAPGVSPSSRYQHAAVFVGARLHVTGGSLKGGRLVEGEAAVAGKFFFLNLL 299
Query: 294 DTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCAD 353
DTAAG WLDRNGLVTSS+TSKGH E+DPS ELMRRCRHASAS+GVRIY+YGGLKG D
Sbjct: 300 DTAAGAWLDRNGLVTSSKTSKGHAEYDPSFELMRRCRHASASVGVRIYVYGGLKG----D 355
Query: 354 ILLDDFLVAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDG-LHSPSFGS 412
+LDDFLVAENSPFQ D+NSP LTSERA T T ++N +NL T TPDG P G
Sbjct: 356 AVLDDFLVAENSPFQPDINSPTLTSERASTITSPRLNHSNLNSFGTSTPDGGPEIPLSGG 415
Query: 413 LSMDKNSMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTE 472
+SMD+NSMEKLREASAAEAEAANAVWQAAQAAS EETSVSDDNSQ AEATSDGSD E
Sbjct: 416 ISMDRNSMEKLREASAAEAEAANAVWQAAQAASTNSAEETSVSDDNSQAAEATSDGSDNE 475
Query: 473 ADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQ 532
ADVRLHPRAVVVAKE VGNLGGMVRQLSLDQFENESRRM+P+NN+ S P KKFTRQRSPQ
Sbjct: 476 ADVRLHPRAVVVAKETVGNLGGMVRQLSLDQFENESRRMVPMNNDASNPAKKFTRQRSPQ 535
Query: 533 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGD 592
GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP+KVFGD
Sbjct: 536 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPIKVFGD 595
Query: 593 LHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENV 652
LHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLET+TLLLALKIEYPENV
Sbjct: 596 LHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETMTLLLALKIEYPENV 655
Query: 653 HLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 712
HLIRGNHEAADINALFGFR+ECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHG
Sbjct: 656 HLIRGNHEAADINALFGFRIECIERMGESDGIWAWTRFNQLFNYLPLAALIEKKIICMHG 715
Query: 713 GIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPD 772
GIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPD
Sbjct: 716 GIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPD 775
Query: 773 RVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLV 832
RV+DFCK+NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLV
Sbjct: 776 RVTDFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLV 835
Query: 833 VVPKLIHPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
VVPKLIHPLPPPLQSPETSPE VIDD WMQELNIQRP TPTRGRPQPD DR+SLAYI
Sbjct: 836 VVPKLIHPLPPPLQSPETSPEHVIDDTWMQELNIQRPQTPTRGRPQPDHDRSSLAYI 892
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444661|ref|XP_004140092.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein phosphatase BSL1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1572 bits (4071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/913 (86%), Positives = 842/913 (92%), Gaps = 32/913 (3%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWL+PAPSYR LETYWDTD+DAPGPRCGHTLTAVAATK+ GPRLILFGGATAIEGG
Sbjct: 1 MASKPWLYPAPSYRALETYWDTDDDAPGPRCGHTLTAVAATKSFGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
A+S+APGIRLAGVTNSVH YDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 ASSAAPGIRLAGVTNSVHSYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDL+VLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLV+QRYLVSVSGNDGKRVLSD
Sbjct: 121 AGHSTDDLFVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVSVSGNDGKRVLSD 180
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPY WQRLNPEGDRPSARMYATASARSDGMFLLCGGRD++GAPLADAYGLLM
Sbjct: 181 AWALDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSTGAPLADAYGLLM 240
Query: 241 HRNGQWEWTLAPGVAPSPR-----------YQHAA------------VFVGARLHVTGGA 277
HRNGQWEWTLAPGV+PSP H A VFVGARLHVTGG
Sbjct: 241 HRNGQWEWTLAPGVSPSPGGGGGGSFHFWCLNHVAIXSLNFAFHIIXVFVGARLHVTGGT 300
Query: 278 LRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIG 337
LRGGRAIEGEA++AVLDTAAGVWLDRNGLVTS+R +KGH ++D SLELMRRCRHA+AS+G
Sbjct: 301 LRGGRAIEGEASIAVLDTAAGVWLDRNGLVTSTRGNKGHADYDSSLELMRRCRHAAASVG 360
Query: 338 VRIYIYGGLKGAFCADILLDDFLVAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYV 397
VRIYIYGGL+G D+LLDDFLVAENS FQS+++SP++TSERAP T SKVNQTN+
Sbjct: 361 VRIYIYGGLRG----DVLLDDFLVAENSSFQSEISSPVITSERAPIITSSKVNQTNITPS 416
Query: 398 TT-PTPDGLHSPSFGSLSMDKNSMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSD 456
T P+ DGL + S G SMDK+SMEKLREASAAEAEAA+AVW A QAAS E+TSVSD
Sbjct: 417 TILPSSDGLENTSAGGTSMDKSSMEKLREASAAEAEAASAVWHAVQAASV---EDTSVSD 473
Query: 457 DNSQVAEATSDGSDTEADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNN 516
DNS+ AE TSDGSD EADVRLHPRAVVVAKEA+GNLGGMVRQLSLDQFENESRRMIP +N
Sbjct: 474 DNSRAAETTSDGSDYEADVRLHPRAVVVAKEAIGNLGGMVRQLSLDQFENESRRMIP-SN 532
Query: 517 ELSYPTKKFTRQRSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQ 576
+LSYPTKKFTRQ+SPQGLHKK+IS LLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM
Sbjct: 533 DLSYPTKKFTRQKSPQGLHKKVISILLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMH 592
Query: 577 EPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLE 636
E TVLQL+APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLE
Sbjct: 593 EQTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLE 652
Query: 637 TITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNC 696
TITLLLALKIEYP+NVHLIRGNHEAADINALFGFRLECIERMGE+DGIWAWTRFNQLFN
Sbjct: 653 TITLLLALKIEYPDNVHLIRGNHEAADINALFGFRLECIERMGESDGIWAWTRFNQLFNY 712
Query: 697 LPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEG 756
LPLAALIEKKIICMHGGIGRSI +VEQIEKLERPITMDAGSIILMDLLWSDPTENDS+EG
Sbjct: 713 LPLAALIEKKIICMHGGIGRSIQTVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEG 772
Query: 757 LRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCG 816
LRPNARGPGLVTFGPDRV++FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCG
Sbjct: 773 LRPNARGPGLVTFGPDRVTEFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCG 832
Query: 817 TANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGR 876
TANNAGAILV+GRGLVVVPKLIHPLPPPLQSPETSPER+I+D WMQELNIQRPPTPTRGR
Sbjct: 833 TANNAGAILVIGRGLVVVPKLIHPLPPPLQSPETSPERMIEDTWMQELNIQRPPTPTRGR 892
Query: 877 PQPDLDRNSLAYI 889
PQPDLDR+SLAYI
Sbjct: 893 PQPDLDRSSLAYI 905
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064780|ref|XP_002301559.1| predicted protein [Populus trichocarpa] gi|222843285|gb|EEE80832.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1572 bits (4070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 796/895 (88%), Positives = 831/895 (92%), Gaps = 11/895 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP+YR LETYW +D+DAPGPRC HTLTAVAATK+ GPRLILFGG TAIEGG
Sbjct: 1 MGSKPWLHPAPAYRALETYWSSDDDAPGPRCSHTLTAVAATKSHGPRLILFGGVTAIEGG 60
Query: 61 ATSSAPGI--RLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGI 118
A SSAPGI RL G TNSVH YDVLTRKWTRI+ AGEPPSPRAAHAAAAVGTMVVFQGGI
Sbjct: 61 A-SSAPGISYRLDGATNSVHSYDVLTRKWTRIQAAGEPPSPRAAHAAAAVGTMVVFQGGI 119
Query: 119 GPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVL 178
GPAGHSTDDLYVLDL+ DKFKWHRVVVQGQGPGPRYGHVMDLV+QRYLV VSGNDGKR L
Sbjct: 120 GPAGHSTDDLYVLDLSTDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVIVSGNDGKRAL 179
Query: 179 SDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGL 238
SDAW LDTAQKPY WQRLNPEGDRPSARMYATASARSDGMFLLCGGRD+ G L DAYGL
Sbjct: 180 SDAWVLDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSFGTALGDAYGL 239
Query: 239 LMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298
LMHRNGQWEWTLAPGV+PS RYQHAAVFVGARLHVTGGAL+GGR +EGEAAVAVLDTAAG
Sbjct: 240 LMHRNGQWEWTLAPGVSPSTRYQHAAVFVGARLHVTGGALKGGRLVEGEAAVAVLDTAAG 299
Query: 299 VWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDD 358
VWLDRNG+VTSS+TSKGH E+DPSLELMRRCRHASAS+GVRIY+YGGLKG D +LDD
Sbjct: 300 VWLDRNGIVTSSKTSKGHAEYDPSLELMRRCRHASASVGVRIYVYGGLKG----DAVLDD 355
Query: 359 FLVAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPD-GLHSPSFGSLSMDK 417
FLVAENSPFQSD+NSP+LTSERA T T + N NL T TPD G P G +SMDK
Sbjct: 356 FLVAENSPFQSDMNSPILTSERASTITSPRSNHYNLNSFGTTTPDGGSEIPLSGGISMDK 415
Query: 418 NSMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRL 477
NSMEKLREASAAEAEAANAVWQAAQAAS+ P EETSVSDDNSQVAEATSDGSD EADVRL
Sbjct: 416 NSMEKLREASAAEAEAANAVWQAAQAASSNPAEETSVSDDNSQVAEATSDGSDNEADVRL 475
Query: 478 HPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKK 537
HPRAVVVAKEAVGNLGG+VRQLSLDQFENESRRM+P+NN+ SYP +KFTR++SPQGLHKK
Sbjct: 476 HPRAVVVAKEAVGNLGGLVRQLSLDQFENESRRMLPMNNDASYPARKFTRKKSPQGLHKK 535
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
IIS LLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQL+AP+KVFGDLHGQF
Sbjct: 536 IISMLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQF 595
Query: 598 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETIT---LLLALKIEYPENVHL 654
GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETIT L A IE PENVHL
Sbjct: 596 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKAKLIENPENVHL 655
Query: 655 IRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGI 714
IRGNHEAADINALFGFR+ECIERMGE+DGIWAWTRFNQLFNCLPLAALIEKKIICMHGGI
Sbjct: 656 IRGNHEAADINALFGFRIECIERMGESDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGI 715
Query: 715 GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774
GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV
Sbjct: 716 GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 775
Query: 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVV 834
SDFCK+NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVV
Sbjct: 776 SDFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVV 835
Query: 835 PKLIHPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
PKLIHPLPPPLQSPETSPERVIDD WMQELNIQRPPTPTRGRPQPDLDRNSLAYI
Sbjct: 836 PKLIHPLPPPLQSPETSPERVIDDAWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 890
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|341657648|gb|AEK86563.1| serine/threonine-protein phosphatase [Camellia sinensis] | Back alignment and taxonomy information |
|---|
Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 773/894 (86%), Positives = 819/894 (91%), Gaps = 11/894 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M + +PAP+YRTLETYWD+D+D+PGPRC HTLTAV+ATK+ GPRLILFGGATAIEGG
Sbjct: 1 MGSNRQFYPAPTYRTLETYWDSDDDSPGPRCSHTLTAVSATKSQGPRLILFGGATAIEGG 60
Query: 61 ATSS-APGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIG 119
A+SS APGIRLAGVTN++H YDVLTRKWTR+RPAGEPPSPRAAH A AVGTMVVFQGGIG
Sbjct: 61 ASSSSAPGIRLAGVTNAIHSYDVLTRKWTRLRPAGEPPSPRAAHTAVAVGTMVVFQGGIG 120
Query: 120 PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLS 179
PAGHSTDDLYVLDL +DKFKWHRVVVQGQGPGPRYGHVMDLV QRYLV+VSGNDGKRVLS
Sbjct: 121 PAGHSTDDLYVLDLASDKFKWHRVVVQGQGPGPRYGHVMDLVGQRYLVTVSGNDGKRVLS 180
Query: 180 DAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLL 239
DAW LDTAQKPYVWQ LNPEGDRPSARMYATASARSDGMFLLCGGRD+SG PLADAYGLL
Sbjct: 181 DAWVLDTAQKPYVWQMLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGMPLADAYGLL 240
Query: 240 MHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299
MH NGQWEWTLAPGV+PSPRY+HAAVFVGARLHVTGGALRGGRA+EGEAAVAVLDTAAG
Sbjct: 241 MHMNGQWEWTLAPGVSPSPRYEHAAVFVGARLHVTGGALRGGRAVEGEAAVAVLDTAAGA 300
Query: 300 WLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDF 359
WLDRNGLVT+SRTSKG EHDPSLELMRRCRHA+AS+ RIYIYGGLKG DILLD+F
Sbjct: 301 WLDRNGLVTTSRTSKGPTEHDPSLELMRRCRHAAASVAERIYIYGGLKG----DILLDEF 356
Query: 360 LVAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSP----SFGSLSM 415
LVAENSP QSD+NSP+L+SERAPT T + N +NL PT P S G SM
Sbjct: 357 LVAENSPIQSDINSPILSSERAPTMTRPRTNHSNLSSFD-PTSLSDTRPEITSSGGMSSM 415
Query: 416 DKNSMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADV 475
KNSMEKL EASAAEAEAA+AVWQA QA SA P EETS+SDDNSQVAE S+ SDT+ DV
Sbjct: 416 RKNSMEKLVEASAAEAEAASAVWQAMQATSATP-EETSMSDDNSQVAETASESSDTDPDV 474
Query: 476 RLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLH 535
RLHPRAVV+AKEA GNLG MVRQLSLDQFENESRRM+P NN+ SYPTKK TRQRSPQGLH
Sbjct: 475 RLHPRAVVIAKEAAGNLGLMVRQLSLDQFENESRRMVPWNNDQSYPTKKITRQRSPQGLH 534
Query: 536 KKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHG 595
KKIISTLL PRNWKAPANRRFFLDSYEVGELCYA EQIFMQEPTVLQL+AP+KVFGDLHG
Sbjct: 535 KKIISTLLMPRNWKAPANRRFFLDSYEVGELCYAVEQIFMQEPTVLQLKAPIKVFGDLHG 594
Query: 596 QFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLI 655
QFGDLMRLFDEYGFPS AG ITYIDYLFLGDYVDRGQHSLETITLLLALKI+YP+NV LI
Sbjct: 595 QFGDLMRLFDEYGFPSPAGGITYIDYLFLGDYVDRGQHSLETITLLLALKIQYPDNVFLI 654
Query: 656 RGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIG 715
RGNHEAADINALFGFRLECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHGGIG
Sbjct: 655 RGNHEAADINALFGFRLECIERMGESDGIWAWTRFNQLFNFLPLAALIEKKIICMHGGIG 714
Query: 716 RSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVS 775
RSIHSVEQIEKLERPITMD GSIILMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV+
Sbjct: 715 RSIHSVEQIEKLERPITMDGGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVT 774
Query: 776 DFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVP 835
DFCK+NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGA+LVVGRGLV+VP
Sbjct: 775 DFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGALLVVGRGLVIVP 834
Query: 836 KLIHPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
KLIHPLPPP QSPETSPERV+ D WMQELNIQRPPTPTRGRPQP+LDRNSLAYI
Sbjct: 835 KLIHPLPPPFQSPETSPERVVHDAWMQELNIQRPPTPTRGRPQPELDRNSLAYI 888
|
Source: Camellia sinensis Species: Camellia sinensis Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356500242|ref|XP_003518942.1| PREDICTED: serine/threonine-protein phosphatase BSL1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1569 bits (4062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/891 (88%), Positives = 837/891 (93%), Gaps = 12/891 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWL+PAP+YRT+ET+W TDEDAPGPRCGHTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLYPAPTYRTIETFWVTDEDAPGPRCGHTLTAVAATKTQGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+SSAPGIRLAGVTN+VH YDV +RKWT I+PAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 -SSSAPGIRLAGVTNTVHSYDVQSRKWTSIKPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDK+KWHRVVVQGQGPGPRYGHVMDLV+QRYLV+VSGNDGKRV+SD
Sbjct: 120 AGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWA DTAQKPYVWQ+LNPEGDRPSARMYATASARSDGMFLLCGGRD+SGAPLADAYGLLM
Sbjct: 180 AWAFDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGV+PSPRYQHAAVFVGARLHVTGG LRGGR++EGEA++AVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFL 360
LDRNG+V+SSR++KGH ++DPSLELMRRCRHA+A++GV I+IYGGL+G DILLDDFL
Sbjct: 300 LDRNGIVSSSRSNKGH-DYDPSLELMRRCRHAAAAVGVHIFIYGGLRG----DILLDDFL 354
Query: 361 VAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGY-VTTPTPDG-LHSPSFGSLSMDKN 418
VAENSP Q D+NSP ERA T SK NQ+NL Y VTTP DG PS G MDKN
Sbjct: 355 VAENSPLQPDINSP----ERASPVTSSKQNQSNLNYNVTTPNLDGGPDIPSSGGSGMDKN 410
Query: 419 SMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLH 478
S+EKLREASAAEAEAA+AVWQA QA S+ P EETSVSDDNSQ E SDGSDTE DVRLH
Sbjct: 411 SLEKLREASAAEAEAASAVWQAVQAISSNPAEETSVSDDNSQAVETVSDGSDTEGDVRLH 470
Query: 479 PRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKI 538
PRAVVVAKEA+GNLGGMVRQLSLDQFENESRRMIP+NN+L YPTKKFTRQ+SPQGLHKKI
Sbjct: 471 PRAVVVAKEALGNLGGMVRQLSLDQFENESRRMIPVNNDLPYPTKKFTRQKSPQGLHKKI 530
Query: 539 ISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFG 598
ISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+APVKVFGDLHGQFG
Sbjct: 531 ISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFG 590
Query: 599 DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGN 658
DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGN
Sbjct: 591 DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGN 650
Query: 659 HEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSI 718
HEAADINALFGFR+ECIERMGENDGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSI
Sbjct: 651 HEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSI 710
Query: 719 HSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFC 778
+SVEQIEKLERPITMD GSI LMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV++FC
Sbjct: 711 NSVEQIEKLERPITMDTGSITLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFC 770
Query: 779 KRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLI 838
K+NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLI
Sbjct: 771 KKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLI 830
Query: 839 HPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
HP+PPPLQSPETSPERV+D+ WMQELNIQRPPTPTRGRPQPDLDR SLAYI
Sbjct: 831 HPIPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 881
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535611|ref|XP_003536338.1| PREDICTED: serine/threonine-protein phosphatase BSL1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1564 bits (4050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 784/891 (87%), Positives = 838/891 (94%), Gaps = 12/891 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWL+PAP+YRT+ET WDTDEDAPGPRCGHTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLYPAPTYRTIETVWDTDEDAPGPRCGHTLTAVAATKTLGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+SSAPGIRLAGVTN+VH YDV +RKWT ++PAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 -SSSAPGIRLAGVTNTVHAYDVQSRKWTSVKPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDK+KWHRVVVQGQGPGPRYGH MDLV+QRYLV+VSGNDGKRV+SD
Sbjct: 120 AGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVVSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPYVWQ+LNPEGDRPSARMYATASARSDGMFLLCGGRD+SGAPLADAYGLLM
Sbjct: 180 AWALDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGV+PSPRYQHAAVFVGARLHVTGG LRGGR++EGEA++AVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFL 360
LDRNG+V+SSR++KGH ++DP LELMRRCRHA+A++GV I+IYGGL+G DILLDDFL
Sbjct: 300 LDRNGIVSSSRSNKGH-DYDPPLELMRRCRHAAAAVGVHIFIYGGLRG----DILLDDFL 354
Query: 361 VAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGY-VTTPTPDG-LHSPSFGSLSMDKN 418
VAENSP Q D+NS SERA T SK NQ+NL Y VT P DG +PSFG MDKN
Sbjct: 355 VAENSPLQPDINS----SERASPVTSSKQNQSNLTYNVTAPNLDGGPDTPSFGHSGMDKN 410
Query: 419 SMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLH 478
S+EKLREASAAEAEAA+AVWQA Q+ S+ P EETS+SD+NSQ AE SDGSDTE DVRLH
Sbjct: 411 SLEKLREASAAEAEAASAVWQAVQSISSNPAEETSLSDENSQAAETVSDGSDTEGDVRLH 470
Query: 479 PRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKI 538
PRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIP+NN+L YPTKKFTRQ+SPQGLHKKI
Sbjct: 471 PRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPVNNDLPYPTKKFTRQKSPQGLHKKI 530
Query: 539 ISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFG 598
ISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+APVKVFGDLHGQFG
Sbjct: 531 ISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFG 590
Query: 599 DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGN 658
DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGN
Sbjct: 591 DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGN 650
Query: 659 HEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSI 718
HEAADINALFGFR+ECIERMGENDGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSI
Sbjct: 651 HEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSI 710
Query: 719 HSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFC 778
+SVE IEKL+RPITMDAGSIILMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV++FC
Sbjct: 711 NSVEDIEKLKRPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFC 770
Query: 779 KRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLI 838
K+NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLI
Sbjct: 771 KKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLI 830
Query: 839 HPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
HP+PPPLQSPETSPER +D+ WMQELNIQRPPTPTRGRPQPDLDR SLAYI
Sbjct: 831 HPIPPPLQSPETSPERGMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 881
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|427199335|gb|AFY26889.1| kelch repeat-containing serine/threonine phosphoesterase family protein [Morella rubra] | Back alignment and taxonomy information |
|---|
Score = 1559 bits (4037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 806/891 (90%), Positives = 844/891 (94%), Gaps = 6/891 (0%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWL PAP+YRTLETYWDTDEDAPGPRCGHTLTAVAATK+ G RLILFGGATAIEGG
Sbjct: 1 MGSKPWLSPAPTYRTLETYWDTDEDAPGPRCGHTLTAVAATKSHGARLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
A+SSAPGIRLAGVTNSVH YDVLTRKWTRIRPAG+PPS RAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 ASSSAPGIRLAGVTNSVHSYDVLTRKWTRIRPAGDPPSLRAAHAAAAVGTMVVFQGGIGP 120
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDK+KWHRVVVQGQGPGPRYGHVMDLV+QRYLV+VSGNDGKRVLSD
Sbjct: 121 AGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVLSD 180
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AW LDTAQKPYVWQRLNPEGDRP ARMYATASARSDGMFLLCGGRD+SG PLADAYGLLM
Sbjct: 181 AWVLDTAQKPYVWQRLNPEGDRPCARMYATASARSDGMFLLCGGRDSSGTPLADAYGLLM 240
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGV+PSPRYQHAAVFVGARLHVTGG LRGGRA+EGE+A+AVLDTAAGVW
Sbjct: 241 HRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAVEGESAIAVLDTAAGVW 300
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFL 360
LDRNGLVTSSRTSKG E+DPSLELMRRCRHA+AS+GVRIY+YGGL+G DILLDDFL
Sbjct: 301 LDRNGLVTSSRTSKGQTEYDPSLELMRRCRHAAASVGVRIYVYGGLRG----DILLDDFL 356
Query: 361 VAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLG-YVTTPTPDG-LHSPSFGSLSMDKN 418
VAENSP+Q +++SP++T ERAP+ T +K N +N+ YVT P DG S G + MDKN
Sbjct: 357 VAENSPYQPEMSSPVMTPERAPSITNTKANHSNVNPYVTVPALDGSAESLLSGGMGMDKN 416
Query: 419 SMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLH 478
SMEKLREASAAEAEAA+AVWQA QAASA P E TSVSDD SQ AE TSDGSDTEADVRLH
Sbjct: 417 SMEKLREASAAEAEAASAVWQAVQAASAAPAEVTSVSDDRSQAAETTSDGSDTEADVRLH 476
Query: 479 PRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKI 538
PRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKI
Sbjct: 477 PRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKI 536
Query: 539 ISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFG 598
ISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+AP+KVFGDLHGQFG
Sbjct: 537 ISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPIKVFGDLHGQFG 596
Query: 599 DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGN 658
DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIE PENVHLIRGN
Sbjct: 597 DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIENPENVHLIRGN 656
Query: 659 HEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSI 718
HEAADINALFGFRLECIERMGENDGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSI
Sbjct: 657 HEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSI 716
Query: 719 HSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFC 778
+SVEQIEKLERPITMDAGSI+LMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV++FC
Sbjct: 717 NSVEQIEKLERPITMDAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFC 776
Query: 779 KRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLI 838
K+NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLI
Sbjct: 777 KKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLI 836
Query: 839 HPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
HPLPPPL SPETSPERVIDD WMQELNIQRPPTPTRGRPQPDLDRNSLAYI
Sbjct: 837 HPLPPPLLSPETSPERVIDDAWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 887
|
Source: Morella rubra Species: Morella rubra Genus: Morella Family: Myricaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|395133374|gb|AFN44700.1| Ser/Thr phosphatase-containing Kelch repeat domain protein [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 1518 bits (3929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 774/892 (86%), Positives = 826/892 (92%), Gaps = 17/892 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP+YR LET+WDTD+DAPGPRCGHTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPTYRLLETFWDTDDDAPGPRCGHTLTAVAATKTHGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+APGIRLAGVTN +H YDVLTRKWTR+RPAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 -NGAAPGIRLAGVTNCIHSYDVLTRKWTRLRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLD+TNDKFKWHRVVVQGQGPGPRYGHVMDLV+QRYLV+VSGNDGKRVLSD
Sbjct: 120 AGHSTDDLYVLDMTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVLSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPY WQRLNPEGDRPSARMYATASAR+DGMFLLCGGRDASG PLADAYGLLM
Sbjct: 180 AWALDTAQKPYAWQRLNPEGDRPSARMYATASARTDGMFLLCGGRDASGIPLADAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGVAPS RYQHAAVFVGARLHVTGGALRGGR +EGEAA+AVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVAPSSRYQHAAVFVGARLHVTGGALRGGRGVEGEAAIAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFL 360
LDR+GLVT+SR SKGH E DPSLELMRRCRHA+AS+GVRIYIYGGL+G D LLD+ L
Sbjct: 300 LDRHGLVTASRGSKGHNEQDPSLELMRRCRHAAASVGVRIYIYGGLRG----DTLLDECL 355
Query: 361 VAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDG---LHSPSFGSLSMDK 417
VAENSP SD+NSP+LTSE A S N +N + PDG +H PS G LSMDK
Sbjct: 356 VAENSPLHSDINSPVLTSEGAIGIPLS--NNSNF----SIDPDGKPEIH-PS-GGLSMDK 407
Query: 418 NSMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRL 477
+SMEKL + AAEAEAANAVWQ AQAASA+P E TSVSD++SQV + S+GSD+E+ VRL
Sbjct: 408 DSMEKLTKDFAAEAEAANAVWQLAQAASAIP-EVTSVSDESSQVPDTASEGSDSESAVRL 466
Query: 478 HPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKK 537
HPRAVVVAKE VGNLGGMVRQLSLDQFENESRRM+P N++S PTKKF RQ+SPQGLHKK
Sbjct: 467 HPRAVVVAKETVGNLGGMVRQLSLDQFENESRRMVPSYNDISNPTKKFARQKSPQGLHKK 526
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
IISTLLRPRNWKAP NR+FFLDSYEVGELCYAAEQIFM EPTVLQL+APVKVFGDLHGQF
Sbjct: 527 IISTLLRPRNWKAPVNRKFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQF 586
Query: 598 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 657
GDLMRLFDEYGFPSTAGD+TYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG
Sbjct: 587 GDLMRLFDEYGFPSTAGDMTYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 646
Query: 658 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 717
NHEAADINALFGFR+ECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRS
Sbjct: 647 NHEAADINALFGFRIECIERMGESDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRS 706
Query: 718 IHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDF 777
I+SVEQIEK+ERPITMDAGSI+LMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV++F
Sbjct: 707 INSVEQIEKIERPITMDAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEF 766
Query: 778 CKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKL 837
CK+NKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLV+VPKL
Sbjct: 767 CKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVIVPKL 826
Query: 838 IHPLPPPLQSPETSPERVIDDMWMQELNIQRPPTPTRGRPQPDLDRNSLAYI 889
IHPLPPPL SPETSPERV+DD WMQELNIQRPPTPTRGRPQPD DR+SLAYI
Sbjct: 827 IHPLPPPLLSPETSPERVMDDNWMQELNIQRPPTPTRGRPQPDHDRSSLAYI 878
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 889 | ||||||
| TAIR|locus:2139399 | 881 | BSL1 "BRI1 suppressor 1 (BSU1) | 0.986 | 0.995 | 0.787 | 0.0 | |
| TAIR|locus:2059610 | 1006 | BSL3 "BRI1 suppressor 1 (BSU1) | 0.469 | 0.414 | 0.748 | 7.4e-293 | |
| TAIR|locus:2201776 | 1018 | BSL2 "BRI1 suppressor 1 (BSU1) | 0.446 | 0.389 | 0.773 | 1.1e-289 | |
| TAIR|locus:2825042 | 793 | BSU1 "BRI1 SUPPRESSOR 1" [Arab | 0.375 | 0.421 | 0.656 | 4e-234 | |
| GENEDB_PFALCIPARUM|PF14_0630 | 889 | PF14_0630 "protein serine/thre | 0.255 | 0.255 | 0.564 | 2.4e-106 | |
| UNIPROTKB|Q8IKH5 | 889 | PF14_0630 "Serine/threonine-pr | 0.255 | 0.255 | 0.564 | 2.4e-106 | |
| TAIR|locus:2168484 | 312 | TOPP2 "AT5G59160" [Arabidopsis | 0.322 | 0.919 | 0.490 | 2e-72 | |
| TAIR|locus:2102762 | 312 | TOPP5 "type one serine/threoni | 0.323 | 0.923 | 0.491 | 3.2e-72 | |
| TAIR|locus:2043122 | 318 | TOPP1 "AT2G29400" [Arabidopsis | 0.323 | 0.905 | 0.462 | 8e-69 | |
| TAIR|locus:2180330 | 324 | TOPP8 "AT5G27840" [Arabidopsis | 0.340 | 0.935 | 0.448 | 1.7e-68 |
| TAIR|locus:2139399 BSL1 "BRI1 suppressor 1 (BSU1)-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3704 (1308.9 bits), Expect = 0., P = 0.
Identities = 703/893 (78%), Positives = 762/893 (85%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP Y+TLET+WD ++DAPGPRC HTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPQYKTLETFWDDEDDAPGPRCAHTLTAVAATKTHGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRXXXXXXXVGTMVVFQGGIGP 120
+ SS PGIRLAGVTN+VH YD+LTRKWTR++PAGEPPSPR VGTMVVFQGGIGP
Sbjct: 61 S-SSVPGIRLAGVTNTVHSYDILTRKWTRLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLD+TNDKFKWHRVVVQG GPGPRYGHVMDLVSQRYLV+V+GNDGKR LSD
Sbjct: 120 AGHSTDDLYVLDMTNDKFKWHRVVVQGDGPGPRYGHVMDLVSQRYLVTVTGNDGKRALSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPYVWQRLNP+GDRPSARMYA+ SARSDGMFLLCGGRD GAPL DAYGLLM
Sbjct: 180 AWALDTAQKPYVWQRLNPDGDRPSARMYASGSARSDGMFLLCGGRDTLGAPLGDAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHV+GG LRGGR I+ EA+VAVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVSGGVLRGGRVIDAEASVAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFL 360
LDRNG VTS+R SKG + DPS ELMRRCRH +AS+G+RIY++GGL+G D+LLDDFL
Sbjct: 300 LDRNGQVTSARGSKGQIDQDPSFELMRRCRHGAASVGIRIYVHGGLRG----DVLLDDFL 355
Query: 361 VAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFG---SLSMDK 417
VAENS FQSD++SPLL S+R T S Y P P G PSF LS+D+
Sbjct: 356 VAENSTFQSDISSPLLASDR--TQQSST---PRFSYAARP-PSG-SEPSFSMSEGLSLDE 408
Query: 418 NSMEKLRXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVSDDNSQVAEATSDGSDTEADVRL 477
NS+EKL S SD +S + E+T+DG+ E DVRL
Sbjct: 409 NSLEKLTEASAAEAEVASSVWRAAQLGAGTLDEEPSTSDASSPIVESTTDGTANEGDVRL 468
Query: 478 HPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNN-ELSYPTKKFTRQRSPQGLHK 536
HPRAVVVAKE VG+LGGMVRQLSLDQF+NESRRM+P+NN ++ PTKKFTRQ+SPQGLHK
Sbjct: 469 HPRAVVVAKETVGSLGGMVRQLSLDQFQNESRRMVPMNNSDVPQPTKKFTRQKSPQGLHK 528
Query: 537 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 596
K+I+ LLRPRNWK P NR+FFLDSYEVGELCYAAEQIFM E TVLQL+AP+KVFGDLHGQ
Sbjct: 529 KVIAALLRPRNWKPPGNRKFFLDSYEVGELCYAAEQIFMHEQTVLQLKAPIKVFGDLHGQ 588
Query: 597 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 656
FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR
Sbjct: 589 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 648
Query: 657 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 716
GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFN LPLAALIE KIICMHGGIGR
Sbjct: 649 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNYLPLAALIENKIICMHGGIGR 708
Query: 717 SIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
SI +VEQIEK+ERPITMDAGS++LMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV++
Sbjct: 709 SISTVEQIEKIERPITMDAGSLVLMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVTE 768
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLV+VPK
Sbjct: 769 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVIVPK 828
Query: 837 LIHPLPPPLQSPETSPERVIDDMWMQELNIXXXXXXXXXXXXXDLDRNSLAYI 889
LIHPLPPP+ SPE SPE DD WMQELNI D DR+SLAYI
Sbjct: 829 LIHPLPPPILSPENSPEHSGDDAWMQELNIQRPPTPTRGRPQPDFDRSSLAYI 881
|
|
| TAIR|locus:2059610 BSL3 "BRI1 suppressor 1 (BSU1)-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1632 (579.6 bits), Expect = 7.4e-293, Sum P(3) = 7.4e-293
Identities = 313/418 (74%), Positives = 347/418 (83%)
Query: 473 ADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFT-RQRSP 531
A VRLH RAVVVA E G LGGMVRQLS+DQFENE RR+ E + +K RQ S
Sbjct: 589 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 648
Query: 532 QGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFG 591
+ KK+++ LL+PR WK P R+FFLD E+ +LC +AE+IF EPTVLQL+AP+K+FG
Sbjct: 649 NSVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFG 708
Query: 592 DLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPEN 651
DLHGQFGDLMRLFDEYG PSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALK+EY N
Sbjct: 709 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHN 768
Query: 652 VHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMH 711
VHLIRGNHEAADINALFGFR+ECIERMGE DGIW W R N+LFN LPLAALIEKKIICMH
Sbjct: 769 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMH 828
Query: 712 GGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGP 771
GGIGRSI+ VEQIE ++RPITM+AGSI+LMDLLWSDPTENDS+EGLRPNARGPGLVTFGP
Sbjct: 829 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 888
Query: 772 DRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGL 831
DRV +FC N LQLI+RAHECVMDGFERFAQG LITLFSATNYCGTANNAGAILV+GR L
Sbjct: 889 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 948
Query: 832 VVVPKLIHPLPPPLQSPETSPERVIDDMWMQELNIXXXXXXXXXXXXXDLDRNSLAYI 889
VVVPKLIHPLPP + SPETSPER I+D WMQELN+ DR SLA+I
Sbjct: 949 VVVPKLIHPLPPAITSPETSPERHIEDTWMQELNVNRPPTPTRGRPQNPNDRGSLAWI 1006
|
|
| TAIR|locus:2201776 BSL2 "BRI1 suppressor 1 (BSU1)-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1617 (574.3 bits), Expect = 1.1e-289, Sum P(2) = 1.1e-289
Identities = 308/398 (77%), Positives = 340/398 (85%)
Query: 469 SDTEADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFT-R 527
S T A +RLH RAVVVA E G LGGMVRQLS+DQFENE RR+ E + +K R
Sbjct: 596 SVTPAGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDR 655
Query: 528 QRSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPV 587
Q S + KK+I+ LL+PR WK P R+FFLD E+ +LC +AE+IF EPTVLQL+AP+
Sbjct: 656 QMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPI 715
Query: 588 KVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIE 647
K+FGDLHGQFGDLMRLFDEYG PSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALK+E
Sbjct: 716 KIFGDLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVE 775
Query: 648 YPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKI 707
Y NVHLIRGNHEAADINALFGFR+ECIERMGE DGIW W R N+LFN LPLAA IEKKI
Sbjct: 776 YQHNVHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKI 835
Query: 708 ICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLV 767
ICMHGGIGRSI+ VEQIE ++RPITM+AGSI+LMDLLWSDPTENDS+EGLRPNARGPGLV
Sbjct: 836 ICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 895
Query: 768 TFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVV 827
TFGPDRV +FC N LQLI+RAHECVMDGFERFAQG LITLFSATNYCGTANNAGAILV+
Sbjct: 896 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL 955
Query: 828 GRGLVVVPKLIHPLPPPLQSPETSPERVIDDMWMQELN 865
GR LVVVPKLIHPLPP L SPETSPER I+D WMQELN
Sbjct: 956 GRDLVVVPKLIHPLPPALSSPETSPERHIEDTWMQELN 993
|
|
| TAIR|locus:2825042 BSU1 "BRI1 SUPPRESSOR 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1204 (428.9 bits), Expect = 4.0e-234, Sum P(4) = 4.0e-234
Identities = 222/338 (65%), Positives = 271/338 (80%)
Query: 529 RSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVK 588
+S Q LHKK+ISTLLRP+ W PANR FFL EV LC E+IFM EPT+LQL+ P+K
Sbjct: 447 QSTQDLHKKVISTLLRPKTWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKVPIK 506
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 648
VFGD+HGQ+GDLMRLF EYG PS GDIT+IDYLFLGDYVDRGQHSLE I LL ALKIEY
Sbjct: 507 VFGDIHGQYGDLMRLFHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEY 566
Query: 649 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKII 708
P+N+HLIRGNHE+ +N ++GF EC ERMGE+ G AW + NQ+F+ LPLAAL+EKK++
Sbjct: 567 PKNIHLIRGNHESLAMNRIYGFLTECEERMGESYGFEAWLKINQVFDYLPLAALLEKKVL 626
Query: 709 CMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVT 768
C+HGGIGR++ ++E+IE +ERP D GS++L D+LWSDPT ND++ G+ NARG G+V+
Sbjct: 627 CVHGGIGRAV-TIEEIENIERPAFPDTGSMVLKDILWSDPTMNDTVLGIVDNARGEGVVS 685
Query: 769 FGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVG 828
FGPD V F +RN L++I+RAHECV+DGFERFA G+LIT+FSATNYCGTA NAGAILV+G
Sbjct: 686 FGPDIVKAFLERNGLEMILRAHECVIDGFERFADGRLITVFSATNYCGTAQNAGAILVIG 745
Query: 829 RGLVVVPKLIHPLPPPLQSPETSPERVIDDMWMQELNI 866
R +V+ PKLIHP PPP+ S E E D WMQELNI
Sbjct: 746 RDMVIYPKLIHPHPPPISSSE---EDYTDKAWMQELNI 780
|
|
| GENEDB_PFALCIPARUM|PF14_0630 PF14_0630 "protein serine/threonine phosphatase" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
|---|
Score = 673 (242.0 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 135/239 (56%), Positives = 170/239 (71%)
Query: 614 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLE 673
GDI DYLFLGDYVDRG +SLE I LL ALK +YP+ +HLIRGNHE IN+L+GF+ E
Sbjct: 613 GDIDSNDYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVAINSLYGFQEE 672
Query: 674 CIERMGEN--DGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPI 731
C R+ E+ D W + NQ+F LP+ A++E KI+C+HGGIG+SI+ + I +L+RP+
Sbjct: 673 CKRRLKEDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQISDISQLKRPL 732
Query: 732 TM-----DAGSIILMDLLWSDPTENDSIEGLRPN-ARGPG----LVTFGPDRVSDFCKRN 781
+ + + DLLWSDPT+NDSI G PN R P +V +GPDRV F + N
Sbjct: 733 VVSQVPQNLNEQKVTDLLWSDPTDNDSILGTIPNDIRDPDGTGHIVKYGPDRVHKFLEEN 792
Query: 782 KLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 840
LQLIIRAHECVMDGFERFA G+LITLFSATNYC + NAGA+L + R L V+PKLI+P
Sbjct: 793 DLQLIIRAHECVMDGFERFAGGKLITLFSATNYCNSHKNAGALLFIRRDLTVIPKLIYP 851
|
|
| UNIPROTKB|Q8IKH5 PF14_0630 "Serine/threonine-protein phosphatase" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
|---|
Score = 673 (242.0 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 135/239 (56%), Positives = 170/239 (71%)
Query: 614 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLE 673
GDI DYLFLGDYVDRG +SLE I LL ALK +YP+ +HLIRGNHE IN+L+GF+ E
Sbjct: 613 GDIDSNDYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVAINSLYGFQEE 672
Query: 674 CIERMGEN--DGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPI 731
C R+ E+ D W + NQ+F LP+ A++E KI+C+HGGIG+SI+ + I +L+RP+
Sbjct: 673 CKRRLKEDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQISDISQLKRPL 732
Query: 732 TM-----DAGSIILMDLLWSDPTENDSIEGLRPN-ARGPG----LVTFGPDRVSDFCKRN 781
+ + + DLLWSDPT+NDSI G PN R P +V +GPDRV F + N
Sbjct: 733 VVSQVPQNLNEQKVTDLLWSDPTDNDSILGTIPNDIRDPDGTGHIVKYGPDRVHKFLEEN 792
Query: 782 KLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 840
LQLIIRAHECVMDGFERFA G+LITLFSATNYC + NAGA+L + R L V+PKLI+P
Sbjct: 793 DLQLIIRAHECVMDGFERFAGGKLITLFSATNYCNSHKNAGALLFIRRDLTVIPKLIYP 851
|
|
| TAIR|locus:2168484 TOPP2 "AT5G59160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 149/304 (49%), Positives = 207/304 (68%)
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
II LL RN K P ++ L+ E+ +LC + +IF+Q+P +L+L AP+K+ GD+HGQ+
Sbjct: 17 IIRRLLDYRNPK-PGTKQAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 598 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 657
DL+RLF+ GFP TA +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 658 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 717
NHE A IN ++GF EC R + W F FNCLP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFS----VRLWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 718 IHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
+ +VEQI+ ++RP + D+G +L DLLWSDP+++ ++G N RG TFGPD+V++
Sbjct: 186 LTNVEQIKNIKRPTDVPDSG--LLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGPDKVAE 240
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
F +N + LI RAH+ V DG+E FA QL+T+FSA NYCG +NAGA++ V L+ +
Sbjct: 241 FLIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQ 300
Query: 837 LIHP 840
++ P
Sbjct: 301 ILKP 304
|
|
| TAIR|locus:2102762 TOPP5 "type one serine/threonine protein phosphatase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 150/305 (49%), Positives = 207/305 (67%)
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
II LL RN KA + DS E+ +LC+ + +IF+Q+P +L+L APVK+ GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKAGTKQAMLNDS-EIRQLCFVSREIFLQQPCLLELAAPVKICGDIHGQY 75
Query: 598 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 657
DL+RLF+ GFP A +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 76 SDLLRLFEYGGFPPAA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 658 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 717
NHE A IN ++GF EC R + W F FNCLP+AA+I++KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFN----VKLWKVFTDTFNCLPVAAVIDEKILCMHGGLSPE 185
Query: 718 IHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
+ +VEQI+ +ERP + DAG +L DLLWSDP+++ ++G N RG TFG D+V++
Sbjct: 186 LINVEQIKNIERPTDVPDAG--LLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGADKVAE 240
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
F +N + L+ RAH+ V DG+E FA QL+T+FSA NYCG +NAGA++ V L+ +
Sbjct: 241 FLIKNDMDLVCRAHQVVEDGYEFFADRQLVTMFSAPNYCGEFDNAGALMSVDESLMCSFQ 300
Query: 837 LIHPL 841
++ P+
Sbjct: 301 ILKPV 305
|
|
| TAIR|locus:2043122 TOPP1 "AT2G29400" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 140/303 (46%), Positives = 202/303 (66%)
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
II L+ RN + + ++ L E+ +LC +++IF+Q+P +L+L AP+K+ GD+HGQ+
Sbjct: 23 IIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFLQQPNLLELEAPIKICGDIHGQY 82
Query: 598 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 657
DL+RLF+ GFP A +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 83 SDLLRLFEYGGFPPEA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 136
Query: 658 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 717
NHE+A IN ++GF EC R + W F FNCLP+AALI+ +I+CMHGGI
Sbjct: 137 NHESASINRIYGFYDECKRRFN----VRLWKIFTDCFNCLPVAALIDDRILCMHGGISPE 192
Query: 718 IHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDF 777
+ S++QI + RP+ + ++ DLLWSDP+ D G+ N RG TFG D+V++F
Sbjct: 193 LKSLDQIRNIARPMDIPESGLVC-DLLWSDPS-GDVGWGM--NDRGVSY-TFGADKVAEF 247
Query: 778 CKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKL 837
+++ + LI RAH+ V DG+E FA+ QL+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 248 LEKHDMDLICRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSIDESLMCSFQI 307
Query: 838 IHP 840
+ P
Sbjct: 308 LKP 310
|
|
| TAIR|locus:2180330 TOPP8 "AT5G27840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 144/321 (44%), Positives = 208/321 (64%)
Query: 530 SPQGLHKK-IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVK 588
S +G+ +K ++ ++R R + ++ L E+ +LC+ A QIF+ +P +L L AP++
Sbjct: 4 SMEGMVEKGVLDDIIR-RLLEGKGGKQVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIR 62
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 648
+ GD+HGQ+ DL+RLF+ G+P +A +YLFLGDYVDRG+ SLETI LLLA KI Y
Sbjct: 63 ICGDIHGQYQDLLRLFEYGGYPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIRY 116
Query: 649 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKII 708
P ++L+RGNHE A IN ++GF EC R + W F FNCLP+AALI++KI+
Sbjct: 117 PSKIYLLRGNHEDAKINRIYGFYDECKRRFN----VRLWKVFTDCFNCLPVAALIDEKIL 172
Query: 709 CMHGGIGRSIHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLV 767
CMHGG+ + ++ QI +++RPI + D+G +L DLLWSDP + IEG + RG
Sbjct: 173 CMHGGLSPDLDNLNQIREIQRPIEIPDSG--LLCDLLWSDPDQK--IEGWADSDRGISC- 227
Query: 768 TFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVV 827
TFG D+V++F +N L LI R H+ V DG+E FA+ +L+T+FSA NY G +NAGA+L V
Sbjct: 228 TFGADKVAEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSV 287
Query: 828 GRGLVVVPKLIHPLPPPLQSP 848
LV +++ P P P
Sbjct: 288 DESLVCSFEIMKPAPASSSHP 308
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q60EX6 | BSL1_ORYSJ | 3, ., 1, ., 3, ., 1, 6 | 0.7838 | 0.9741 | 0.9807 | yes | no |
| Q8L7U5 | BSL1_ARATH | 3, ., 1, ., 3, ., 1, 6 | 0.8253 | 0.9865 | 0.9954 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 889 | |||
| cd07419 | 311 | cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 pho | 0.0 | |
| smart00156 | 271 | smart00156, PP2Ac, Protein phosphatase 2A homologu | 1e-110 | |
| cd07414 | 293 | cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-li | 1e-108 | |
| cd07415 | 285 | cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phos | 3e-89 | |
| PTZ00480 | 320 | PTZ00480, PTZ00480, serine/threonine-protein phosp | 3e-84 | |
| PTZ00244 | 294 | PTZ00244, PTZ00244, serine/threonine-protein phosp | 6e-74 | |
| cd00144 | 225 | cd00144, MPP_PPP_family, phosphoprotein phosphatas | 2e-71 | |
| cd07416 | 305 | cd07416, MPP_PP2B, PP2B, metallophosphatase domain | 3e-70 | |
| PTZ00239 | 303 | PTZ00239, PTZ00239, serine/threonine protein phosp | 4e-69 | |
| cd07417 | 316 | cd07417, MPP_PP5_C, PP5, C-terminal metallophospha | 3e-67 | |
| cd07420 | 321 | cd07420, MPP_RdgC, Drosophila melanogaster RdgC an | 8e-51 | |
| cd07418 | 377 | cd07418, MPP_PP7, PP7, metallophosphatase domain | 1e-42 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 7e-27 | |
| COG0639 | 155 | COG0639, ApaH, Diadenosine tetraphosphatase and re | 1e-13 | |
| cd07424 | 207 | cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophos | 5e-10 | |
| cd07422 | 257 | cd07422, MPP_ApaH, Escherichia coli ApaH and relat | 6e-08 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 3e-07 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 4e-07 | |
| cd07425 | 208 | cd07425, MPP_Shelphs, Shewanella-like phosphatases | 1e-06 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 2e-06 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 4e-06 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 1e-05 | |
| pfam13854 | 42 | pfam13854, Kelch_5, Kelch motif | 1e-05 | |
| PHA02239 | 235 | PHA02239, PHA02239, putative protein phosphatase | 1e-05 | |
| PRK00166 | 275 | PRK00166, apaH, diadenosine tetraphosphatase; Revi | 3e-05 | |
| cd07423 | 234 | cd07423, MPP_PrpE, Bacillus subtilis PrpE and rela | 7e-05 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 2e-04 | |
| pfam13415 | 48 | pfam13415, Kelch_3, Galactose oxidase, central dom | 3e-04 | |
| cd07421 | 304 | cd07421, MPP_Rhilphs, Rhilph phosphatases, metallo | 3e-04 | |
| cd07413 | 222 | cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 | 5e-04 | |
| PRK11439 | 218 | PRK11439, pphA, serine/threonine protein phosphata | 5e-04 | |
| pfam13418 | 49 | pfam13418, Kelch_4, Galactose oxidase, central dom | 9e-04 | |
| pfam13418 | 49 | pfam13418, Kelch_4, Galactose oxidase, central dom | 0.001 | |
| PRK13625 | 245 | PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphospha | 0.001 | |
| pfam13415 | 48 | pfam13415, Kelch_3, Galactose oxidase, central dom | 0.002 |
| >gnl|CDD|163662 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 577 bits (1489), Expect = 0.0
Identities = 225/311 (72%), Positives = 256/311 (82%), Gaps = 8/311 (2%)
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
II+ LL+PR WK P +RRFF + E+ ELC AAE IF QEP VL+LRAP+K+FGD+HGQF
Sbjct: 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQF 60
Query: 598 GDLMRLFDEYGFPST--AGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLI 655
GDLMRLFDEYG P T AGDI YIDYLFLGDYVDRG +SLETI LLLALK++YP +HLI
Sbjct: 61 GDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLI 120
Query: 656 RGNHEAADINALFGFRLECIERMGE--NDGIWAWTRFNQLFNCLPLAALIEKKIICMHGG 713
RGNHE DINALFGFR EC ER+GE NDG W R N+LF LPLAA+IE KI+CMHGG
Sbjct: 121 RGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGG 180
Query: 714 IGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNA---RGPGL-VTF 769
IGRSI+ V +IE L+RP+TM+ G ++MDLLWSDPTENDS+ GLRPNA RGPGL V F
Sbjct: 181 IGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240
Query: 770 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGR 829
GPDRV F + N LQ+IIRAHECVMDGFERFAQG+LITLFSATNYCGTA NAGAILV+GR
Sbjct: 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGR 300
Query: 830 GLVVVPKLIHP 840
L ++PKLIHP
Sbjct: 301 DLTIIPKLIHP 311
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 311 |
| >gnl|CDD|197547 smart00156, PP2Ac, Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Score = 339 bits (873), Expect = e-110
Identities = 131/273 (47%), Positives = 176/273 (64%), Gaps = 16/273 (5%)
Query: 561 YEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYID 620
E+ EL ++IF QEP ++++ APV V GD+HGQF DL+RLFD+ G P +
Sbjct: 4 EEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDKNGQPP------ETN 57
Query: 621 YLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGE 680
Y+FLGDYVDRG S+E I LL ALKI YP + L+RGNHE+ +N ++GF EC + GE
Sbjct: 58 YVFLGDYVDRGPFSIEVILLLFALKILYPNRIVLLRGNHESRSMNEIYGFYDECKRKYGE 117
Query: 681 NDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPI-TMDAGSII 739
+ +FN+ F+ LPLAALI KI+CMHGG+ + +++ I KL+RP D G +
Sbjct: 118 R----IYEKFNEAFSWLPLAALINGKILCMHGGLSPDLTTLDDIRKLKRPQEPPDDG--L 171
Query: 740 LMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFER 799
L+DLLWSDP + G P+ RG FGPD V +F K+N L+LIIRAH+ V DG+E
Sbjct: 172 LIDLLWSDPDQPV--NGFGPSIRGAS-YIFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEF 228
Query: 800 FAQGQLITLFSATNYCGTANNAGAILVVGRGLV 832
FA G+L+T+FSA NYC N A+L V + L
Sbjct: 229 FADGKLVTIFSAPNYCDRFGNKAAVLKVDKDLK 261
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. Length = 271 |
| >gnl|CDD|163657 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 335 bits (860), Expect = e-108
Identities = 144/305 (47%), Positives = 195/305 (63%), Gaps = 18/305 (5%)
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
II LL R + + L E+ LC + +IF+ +P +L+L AP+K+ GD+HGQ+
Sbjct: 5 IIERLLEVRG--SRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 62
Query: 598 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 657
DL+RLF+ GFP + +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 63 YDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 116
Query: 658 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 717
NHE A IN ++GF EC R I W F FNCLP+AA+I++KI CMHGG+
Sbjct: 117 NHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPD 172
Query: 718 IHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
+ S+EQI ++ RP + D G +L DLLWSDP ++ ++G N RG TFG D V+
Sbjct: 173 LQSMEQIRRIMRPTDVPDQG--LLCDLLWSDPDKD--VQGWGENDRGVS-FTFGKDVVAK 227
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
F ++ L LI RAH+ V DG+E FA+ QL+TLFSA NYCG +NAGA++ V L+ +
Sbjct: 228 FLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 287
Query: 837 LIHPL 841
++ P
Sbjct: 288 ILKPA 292
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 293 |
| >gnl|CDD|163658 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 284 bits (730), Expect = 3e-89
Identities = 119/276 (43%), Positives = 164/276 (59%), Gaps = 30/276 (10%)
Query: 558 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 617
L EV LC A++I ++E V ++R+PV V GD+HGQF DL+ LF GD
Sbjct: 15 LPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELF------RVGGDPP 68
Query: 618 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 677
+YLFLGDYVDRG +S+ET LLLALK+ YP+ + L+RGNHE+ I ++GF EC+ +
Sbjct: 69 DTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRK 128
Query: 678 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLER-------- 729
G N + W LF+ LPLAALI+ +I C+HGG+ SI +++QI ++R
Sbjct: 129 YG-NANV--WKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEG 185
Query: 730 PITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRA 789
P+ DLLWSDP D IEG + RG G FG D V +F N L LI RA
Sbjct: 186 PMC---------DLLWSDP---DDIEGWGISPRGAG-YLFGQDVVEEFNHNNGLTLICRA 232
Query: 790 HECVMDGFERFAQGQLITLFSATNYCGTANNAGAIL 825
H+ VM+G++ +L+T++SA NYC N +I+
Sbjct: 233 HQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIM 268
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2A belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 285 |
| >gnl|CDD|185658 PTZ00480, PTZ00480, serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 3e-84
Identities = 143/304 (47%), Positives = 195/304 (64%), Gaps = 18/304 (5%)
Query: 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 597
II LL R K N L EV LC A IF+ +P +L+L AP+K+ GD+HGQ+
Sbjct: 14 IIERLLSVRGSKPGKNVN--LTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQY 71
Query: 598 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 657
DL+RLF+ G+P + +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 72 FDLLRLFEYGGYPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 125
Query: 658 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 717
NHE A IN ++GF EC R I W F FNCLP+AALI++KI+CMHGG+
Sbjct: 126 NHECASINRIYGFYDECKRRY----TIKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPE 181
Query: 718 IHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
+ ++EQI ++ RP + D G +L DLLWSDP ++ ++G N RG V F + V
Sbjct: 182 LSNLEQIRRIMRPTDVPDTG--LLCDLLWSDPDKD--VQGWADNERGVSYV-FSQEIVQV 236
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
F K+++L LI RAH+ V DG+E F++ QL+TLFSA NYCG +NAG+++ + L+ +
Sbjct: 237 FLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQ 296
Query: 837 LIHP 840
++ P
Sbjct: 297 ILKP 300
|
Length = 320 |
| >gnl|CDD|140271 PTZ00244, PTZ00244, serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Score = 244 bits (623), Expect = 6e-74
Identities = 120/296 (40%), Positives = 177/296 (59%), Gaps = 18/296 (6%)
Query: 533 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGD 592
L + +I +L + + R+ + ++ + +IFM +P +L++R PV+V GD
Sbjct: 2 SLVQTLIEKMLTVKGNRTQ--RQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGD 59
Query: 593 LHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENV 652
HGQ+ DL+R+F++ GFP Y +YLFLGDYVDRG+HS+ETITL KI YPEN
Sbjct: 60 THGQYYDLLRIFEKCGFPP------YSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENF 113
Query: 653 HLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 712
L+RGNHE A IN ++GF + R I + F +FN +P+ +I +KIICMHG
Sbjct: 114 FLLRGNHECASINKMYGFFDDVKRRY----NIKLFKAFTDVFNTMPVCCVISEKIICMHG 169
Query: 713 GIGRSIHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGP 771
G+ + S+ + ++ERP + D G IL DLLW+DP D + G + RG + FG
Sbjct: 170 GLSPDLTSLASVNEIERPCDVPDRG--ILCDLLWADP--EDEVRGFLESDRGVSYL-FGE 224
Query: 772 DRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVV 827
D V+DF + LI+RAH+ + G+ FA QL+T+FSA NYCG +N A++ +
Sbjct: 225 DIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNI 280
|
Length = 294 |
| >gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 2e-71
Identities = 105/245 (42%), Positives = 133/245 (54%), Gaps = 27/245 (11%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 648
V GD+HG DL+RL ++ GFP +FLGDYVDRG S+E I LLLALKI
Sbjct: 2 VIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL- 54
Query: 649 PENVHLIRGNHEAADINALFGFRLECIE-----RMGENDGIWAWTRFNQLFNCLPLAALI 703
P+NV L+RGNHE +N L+GF E R+ + G W FN +F LPLAALI
Sbjct: 55 PDNVILLRGNHEDMLLNFLYGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALI 114
Query: 704 E-KKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNAR 762
E KK++C+HGG+ + EQI++ + DLLWSDP E G
Sbjct: 115 ETKKVLCVHGGLSPGLPLEEQIKEEPEDQLPE-------DLLWSDPLELPGGFGSSRRGG 167
Query: 763 GPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAG 822
GP D V F K+N L+LI+R H V +G+E G LIT+ S NYCG N
Sbjct: 168 GP-------DAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKL 220
Query: 823 AILVV 827
A LV+
Sbjct: 221 AALVL 225
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 225 |
| >gnl|CDD|163659 cd07416, MPP_PP2B, PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 3e-70
Identities = 106/272 (38%), Positives = 149/272 (54%), Gaps = 33/272 (12%)
Query: 570 AEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVD 629
+I QEP +L++ APV V GD+HGQF DL++LF+ G P+ YLFLGDYVD
Sbjct: 28 GAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT------RYLFLGDYVD 81
Query: 630 RGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTR 689
RG S+E + L ALKI YP+ + L+RGNHE + F F+ EC + E +
Sbjct: 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSER----VYDA 137
Query: 690 FNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLER----PITMDAGSIILM-DLL 744
+ F+CLPLAAL+ ++ +C+HGG+ + +++ I KL+R P + M DLL
Sbjct: 138 CMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPP------AFGPMCDLL 191
Query: 745 WSDPTENDSIEGLR----PNA-RGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFER 799
WSDP E+ E + N RG + V +F ++N L IIRAHE G+
Sbjct: 192 WSDPLEDFGNEKTQEHFVHNTVRGCSYF-YSYRAVCEFLQKNNLLSIIRAHEAQDAGYRM 250
Query: 800 FAQGQ------LITLFSATNYCGTANNAGAIL 825
+ + Q LIT+FSA NY NN A+L
Sbjct: 251 YRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL 282
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 305 |
| >gnl|CDD|173488 PTZ00239, PTZ00239, serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Score = 231 bits (590), Expect = 4e-69
Identities = 111/261 (42%), Positives = 163/261 (62%), Gaps = 15/261 (5%)
Query: 566 LCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLG 625
+C A++IF++E V +RAPV V GD+HGQF DL LF E GDI +Y+F+G
Sbjct: 24 ICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKE------GGDIPNANYIFIG 77
Query: 626 DYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIW 685
D+VDRG +S+ET+ LL LK++YP N+ L+RGNHE+ ++GF E + + G ++
Sbjct: 78 DFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSN--- 134
Query: 686 AWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLW 745
W F +F+CLPLAALIE +I+C+HGG+ + +++QI ++R I + DL+W
Sbjct: 135 PWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMW 193
Query: 746 SDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFER-FAQGQ 804
SDP E +E N+RG G + FG +FC+ N L LI RAH+ VM+G++ F
Sbjct: 194 SDPEE---VEYWAVNSRGAGYL-FGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQN 249
Query: 805 LITLFSATNYCGTANNAGAIL 825
L+T++SA NYC N +IL
Sbjct: 250 LVTVWSAPNYCYRCGNIASIL 270
|
Length = 303 |
| >gnl|CDD|163660 cd07417, MPP_PP5_C, PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 3e-67
Identities = 102/271 (37%), Positives = 149/271 (54%), Gaps = 29/271 (10%)
Query: 563 VGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITY 618
++ +++ + P+++++ P + V GD HGQF DL+ +F+ G PS
Sbjct: 34 AYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNP--- 90
Query: 619 IDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERM 678
YLF GD+VDRG S+E I L A K+ YP + HL RGNHE ++N ++GF E +
Sbjct: 91 --YLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY 148
Query: 679 GENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSV--EQIEKLER----PIT 732
E + F+++FN LPLA LI K++ +HGG+ S V + I K++R P
Sbjct: 149 NEQ----MFDLFSEVFNWLPLAHLINGKVLVVHGGL-FSDDGVTLDDIRKIDRFRQPP-- 201
Query: 733 MDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHEC 792
D+G ++ +LLWSDP G P+ RG G FGPD F + N L+ IIR+HE
Sbjct: 202 -DSG--LMCELLWSDPQPQP---GRSPSKRGVGC-QFGPDVTKRFLEENNLEYIIRSHEV 254
Query: 793 VMDGFERFAQGQLITLFSATNYCGTANNAGA 823
+G+E G+ IT+FSA NYC N GA
Sbjct: 255 KDEGYEVEHDGKCITVFSAPNYCDQMGNKGA 285
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 316 |
| >gnl|CDD|163663 cd07420, MPP_RdgC, Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 181 bits (461), Expect = 8e-51
Identities = 97/301 (32%), Positives = 144/301 (47%), Gaps = 42/301 (13%)
Query: 563 VGELCYAAEQIFMQEPTVLQLRA----PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITY 618
V + A ++ Q P + ++ V + GDLHG+ DL +F + G PS
Sbjct: 25 VLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENP--- 81
Query: 619 IDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERM 678
Y+F GD+VDRG+ S+E + +L A + YP VHL RGNHE +N +GF E + +
Sbjct: 82 --YVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKY 139
Query: 679 GENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGI------------------------ 714
+ G +F+ LPLA +I+ KI+ +HGGI
Sbjct: 140 KLH-GKKILRLLEDVFSWLPLATIIDNKILVVHGGISDSTDLDLLDKIDRHKYVSVLRPP 198
Query: 715 --GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNA-RGPGLVTFGP 771
+ E P+ IL D+LWSDP +G +PN RG G FGP
Sbjct: 199 LRKGMEELTGEEEDPSEPLDKTEWRQIL-DILWSDPKAQ---KGCKPNTFRGGG-CYFGP 253
Query: 772 DRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGL 831
D S +++ L L+IR+HEC +G+E ++IT+FSA+NY +N GA + +G L
Sbjct: 254 DVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDL 313
Query: 832 V 832
Sbjct: 314 T 314
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 321 |
| >gnl|CDD|163661 cd07418, MPP_PP7, PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 1e-42
Identities = 98/307 (31%), Positives = 150/307 (48%), Gaps = 60/307 (19%)
Query: 558 LDSYEVGELCYAAEQIFMQEPTVLQL----RAPVKVFGDLHGQFGDLMRLFDEYGFPSTA 613
L L A +I +EP +++ V V GD+HGQ D++ L ++ GFP
Sbjct: 35 LPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFPD-- 92
Query: 614 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLE 673
+ Y+ F GDYVDRG LET LLL+ K+ P+ V+L+RGNHE+ +++GF E
Sbjct: 93 QNRFYV---FNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQE 149
Query: 674 CIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS---------------- 717
+ + G + G + + F LPLA++I ++ HGG+ RS
Sbjct: 150 VLTKYG-DKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRV 208
Query: 718 -----------IHSVEQIEKLERPITMDAG---SIILMDLLWSDPTENDSIEGLRPNA-R 762
+ +++ + K R + G ++I D+LWSDP+ GL PN R
Sbjct: 209 LLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLTP---GLSPNKQR 265
Query: 763 GPGLVTFGPDRVSDFCKRNKLQLIIRAHE------------CVMDGF---ERFAQGQLIT 807
G GL+ +GPD +F ++N L+LIIR+HE + G+ G+LIT
Sbjct: 266 GIGLL-WGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLIT 324
Query: 808 LFSATNY 814
LFSA +Y
Sbjct: 325 LFSAPDY 331
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 377 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 7e-27
Identities = 67/233 (28%), Positives = 93/233 (39%), Gaps = 72/233 (30%)
Query: 586 PVKVFGDLHGQFGDL---MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLL 642
+ V GDLHG DL + L + G P D+ LFLGD VDRG SLE + LL
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPK--PDL----VLFLGDLVDRGPPSLEVLALLF 54
Query: 643 ALKIEYPENVHLIRGNHEAADINALFGFRLECIER---------------------MGEN 681
ALK++ P V+L+RGNH+ N+ GF LEC +
Sbjct: 55 ALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGTVEIIGLSSLYGK 114
Query: 682 DGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILM 741
G W F +L + L LAAL++ KI+ +HG + S+ S + I
Sbjct: 115 GGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDI----------------- 157
Query: 742 DLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVM 794
FG + + D K N + L++R H V
Sbjct: 158 -------------------------YLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|223712 COG0639, ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 1e-13
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 664 INALFGFRLECIERMGENDGIWAWTR-FNQLFNCLPLAALIE-KKIICMHGGIGRSI-HS 720
+ AL+GF E R + W + F+ LPLAA+ E K++C HGG+ +
Sbjct: 3 LTALYGFYDEK-LRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRL 61
Query: 721 VEQIEKLERPITMD-AGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCK 779
++ IE L+R + + DLLWSDP P RG G D + F
Sbjct: 62 LDIIEVLDRLRACEVPHAGHTHDLLWSDPDG-GDRRIWNPGPRGVPR--DGGDVTAVFGI 118
Query: 780 RNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCG 816
+ +LI RAH G L+T FSA NYC
Sbjct: 119 VHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155
|
Length = 155 |
| >gnl|CDD|163667 cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 5e-10
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLF-LGDYVDRGQHSLETITLLLALKIE 647
V GD+HG + L + D GF D L +GD +DRG SL + LL
Sbjct: 5 VVGDIHGHYSLLQKALDAVGFD------PARDRLISVGDLIDRGPESLACLELL-----L 53
Query: 648 YPENVHLIRGNHEAADINALFGFRLECIERMGENDGIW 685
P H +RGNHE I+AL L+ R N G W
Sbjct: 54 EP-WFHAVRGNHEQMAIDALRAEPLD-AVRWLANGGEW 89
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 207 |
| >gnl|CDD|163665 cd07422, MPP_ApaH, Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 54.4 bits (132), Expect = 6e-08
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 43/144 (29%)
Query: 589 VFGDLHGQFGDLMRLFDEYGF-PSTAGDITYIDYL-FLGDYVDRGQHSLETITLLLALKI 646
GD+ G + +L RL ++ F P+ D L +GD V+RG SLET+ + +L
Sbjct: 3 AIGDIQGCYDELQRLLEKINFDPAK-------DRLWLVGDLVNRGPDSLETLRFVKSLG- 54
Query: 647 EYPENVHLIRGNHEAADINAL---FGFRLECIERMGENDGIWAWTRFNQLFN-------- 695
++ + GNH D++ L G I++ + D + + N
Sbjct: 55 ---DSAKTVLGNH---DLHLLAVAAG-----IKKPKKKD------TLDDILNAPDRDELL 97
Query: 696 ----CLPLAALIEKKIICM-HGGI 714
PL + I M H GI
Sbjct: 98 DWLRHQPLLHRDPELGILMVHAGI 121
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathways in unknown. The PPP (phosphoprotein phosphatase) family, to which ApaH belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and PrpA/PrpB. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 257 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 3e-07
Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 46/279 (16%)
Query: 86 KWTRI-RPAGEPPSPRAAHAAAAVG-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRV 143
W ++ + G+ P PR +H A VG + F G + P H DLYV D +
Sbjct: 8 GWIKVEQKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWS---- 63
Query: 144 VVQGQGPGPR---YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVW-QRLNPE 199
+ G PR G M V + + G D KR SD ++ DT + + + +L+ E
Sbjct: 64 IAPANGDVPRISCLGVRMVAVGTKLYI-FGGRDEKREFSDFYSYDTVKNEWTFLTKLDEE 122
Query: 200 GDRPSARMYATASARSDGMFLLCGGRDASGAPLA-------DAYGLLMHRNGQWEWTLAP 252
G P AR + + ++ + +++ GG G +AY + +G+W P
Sbjct: 123 GG-PEARTFHSMASDENHVYVF-GGVSKGGLMKTPERFRTIEAYNI---ADGKWVQLPDP 177
Query: 253 GVAPSPRYQHAAVFVGARLHVTGG----ALRGGRAIEGEAAVAVLDTAAGVW--LDRNGL 306
G R V ++ V G L GG++ AV D A+G W ++ G
Sbjct: 178 GENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGA 237
Query: 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGG 345
S+R+ H A +G I I+GG
Sbjct: 238 KPSARSVFAH-----------------AVVGKYIIIFGG 259
|
Length = 341 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 4e-07
Identities = 65/269 (24%), Positives = 103/269 (38%), Gaps = 60/269 (22%)
Query: 7 LHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATA---------- 56
L P + + PG RC H + V G ++ FGG
Sbjct: 143 LPSTPKLLGKWIKVEQKGEGPGLRCSHGIAQV------GNKIYSFGGEFTPNQPIDKHLY 196
Query: 57 ---IEGGATSSAP-----------GIRLAGVTNSVHLY---------------DVLTRKW 87
+E S +P G+R+ + ++++++ D T +W
Sbjct: 197 VFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTNEW 256
Query: 88 TRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTN--DKFKWHRVVV 145
+ P E P+PR+ H+ AA V GG+ +T L LD N DK KW
Sbjct: 257 KLLTPVEEGPTPRSFHSMAADEENVYVFGGVS----ATARLKTLDSYNIVDK-KWFHCST 311
Query: 146 QGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSA 205
G R G +++V + V V G +G V D D Q W ++ G RPS
Sbjct: 312 PGDSFSIRGGAGLEVVQGKVWV-VYGFNGCEV-DDVHYYDPVQDK--WTQVETFGVRPSE 367
Query: 206 R-MYATASARSDGMFLLCGGRDASGAPLA 233
R ++A+A+ G ++ G + + PLA
Sbjct: 368 RSVFASAAV---GKHIVIFGGEIAMDPLA 393
|
Length = 470 |
| >gnl|CDD|163668 cd07425, MPP_Shelphs, Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 1e-06
Identities = 32/144 (22%), Positives = 44/144 (30%), Gaps = 24/144 (16%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLF--LGDYVDRGQHSLETITLLLALKI 646
GDLHG + G + LGD DRG +E + LL L+
Sbjct: 2 AIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQ 61
Query: 647 EYPE---NVHLIRGNHEA-----------ADINALFGFRLECIERMGENDGIWA-WTRFN 691
E + VH + GNHE FG + G W R
Sbjct: 62 EAAKAGGKVHFLLGNHELMNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSK 121
Query: 692 QLFNCLPLAALIEKKIICMHGGIG 715
+ + +HGG+G
Sbjct: 122 P-------VIVKVNDTLFVHGGLG 138
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 208 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-06
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 648
V D+HG L + + + D L LGD V G E + LAL +
Sbjct: 2 VISDIHGNLEALEAVLEAALAAAEKPDF----VLVLGDLVGDGPDPEEVLAAALALLLLL 57
Query: 649 PENVHLIRGNHE 660
V+++ GNH+
Sbjct: 58 GIPVYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 4e-06
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 48 LILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA 107
++ G + G ATS PG + +N+V +D + KWT + G PS R+ A A
Sbjct: 190 AVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAV 249
Query: 108 VGTMVVFQGG---------IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153
VG ++ GG +GP G +++ Y LD + W ++ G+ PR
Sbjct: 250 VGKYIIIFGGEVWPDLKGHLGP-GTLSNEGYALD--TETLVWEKLGECGEPAMPR 301
|
Length = 341 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 1e-05
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGG---------IGPAGHST 125
+ VH YD + KWT++ G PS R+ A+AAVG +V GG +GP G T
Sbjct: 343 DDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGP-GQLT 401
Query: 126 DDLYVLDLTNDKFKWHRV 143
D + LD + +W R+
Sbjct: 402 DGTFALD--TETLQWERL 417
|
Length = 470 |
| >gnl|CDD|222419 pfam13854, Kelch_5, Kelch motif | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 1e-05
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 96 PPSPRAAHAAAAVGT-MVVFQGGIGPAGHSTDDLYVLDLTND 136
P PRA H A VG + ++ G G S+DD+YVL L
Sbjct: 1 LPVPRANHCAVVVGGEIYLYGGYTSGNGQSSDDVYVLSLPGF 42
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 42 |
| >gnl|CDD|107154 PHA02239, PHA02239, putative protein phosphatase | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 648
V D+HG++ L+ + D+ + +FLGDYVDRG+ S + + + L
Sbjct: 5 VVPDIHGEYQKLLTIMDKINNERKPEETI----VFLGDYVDRGKRSKDVVNYIFDLMSN- 59
Query: 649 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIW 685
+NV + GNH+ N +E ++R+ D W
Sbjct: 60 DDNVVTLLGNHDDEFYNI-----MENVDRLSIYDIEW 91
|
Length = 235 |
| >gnl|CDD|234673 PRK00166, apaH, diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 46.7 bits (112), Expect = 3e-05
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 37/141 (26%)
Query: 589 VFGDLHGQFGDLMRLFDEYGF-PSTAGDITYIDYL-FLGDYVDRGQHSLETITLLLALKI 646
GD+ G + +L RL ++ F P+ D L +GD V+RG SLE + + +L
Sbjct: 5 AIGDIQGCYDELQRLLEKIDFDPAK-------DTLWLVGDLVNRGPDSLEVLRFVKSLG- 56
Query: 647 EYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFN----------- 695
++ + GNH D++ L I+R + D + +
Sbjct: 57 ---DSAVTVLGNH---DLHLLAVAA--GIKRNKKKD------TLDPILEAPDRDELLDWL 102
Query: 696 -CLPLAA-LIEKKIICMHGGI 714
PL E ++ +H GI
Sbjct: 103 RHQPLLHVDEELGLVMVHAGI 123
|
Length = 275 |
| >gnl|CDD|163666 cd07423, MPP_PrpE, Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTA-GDITYID---YLFLGDYVDRGQHSLETITLL 641
P + GD+HG + +L L ++ G+ G +T+ + +F+GD VDRG S E + L+
Sbjct: 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLV 61
Query: 642 LALKIEYPENVHLIRGNHE 660
+++ + GNH+
Sbjct: 62 MSMVAA--GAALCVPGNHD 78
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 234 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 53/219 (24%), Positives = 82/219 (37%), Gaps = 10/219 (4%)
Query: 42 KTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRA 101
K G + +L GG I G S + G S+ L KW ++ GE P R
Sbjct: 110 KRPGVKFVLQGGK--IVGFHGRSTDVLHSLGAYISLPSTPKLLGKWIKVEQKGEGPGLRC 167
Query: 102 AHAAAAVGTMVV-FQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDL 160
+H A VG + F G P LYV DL + W G P V +
Sbjct: 168 SHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDL--ETRTWSISPATGDVPHLSCLGVRMV 225
Query: 161 VSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFL 220
L G D R + ++ DT W+ L P + P+ R + + +A + +++
Sbjct: 226 SIGSTLYVFGGRDASRQYNGFYSFDTTTN--EWKLLTPVEEGPTPRSFHSMAADEENVYV 283
Query: 221 LCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPR 259
G + D+Y ++ + W PG + S R
Sbjct: 284 FGGVSATARLKTLDSYNIVDKK---WFHCSTPGDSFSIR 319
|
Length = 470 |
| >gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 3e-04
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVM 158
G + VF GG+G G +DL+V DL + W ++ G PGPR GH
Sbjct: 2 GKIYVF-GGLGDGGTRLNDLWVYDLDTN--TWEKL---GDLPGPRAGHAA 45
|
Length = 48 |
| >gnl|CDD|163664 cd07421, MPP_Rhilphs, Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 591 GDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPE 650
GD+HG L L+ D +FLGDY DRG + + I L++L ++P+
Sbjct: 8 GDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPK 67
Query: 651 NVHL-IRGNHEAA 662
H+ + GNH+ A
Sbjct: 68 QRHVFLCGNHDFA 80
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 304 |
| >gnl|CDD|163656 cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYID--YLFLGDYVDRGQHSLETITLLLALKI 646
GD+HG L+ L + G+ +G + + +FLGD +DRG E + ++ ++
Sbjct: 3 FIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV- 61
Query: 647 EYPENVH--LIRGNHEAADINAL 667
+ H + GNHE NA+
Sbjct: 62 ---DAGHALAVMGNHE---FNAI 78
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 222 |
| >gnl|CDD|236911 PRK11439, pphA, serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLF-LGDYVDRGQHSLETITLLLALKIE 647
+ GD+HG F LMR F + D L +GD +DRG SL + LL
Sbjct: 21 LVGDIHGCFEQLMRKLRHCRFDP------WRDLLISVGDLIDRGPQSLRCLQLL------ 68
Query: 648 YPENVHLIRGNHEAADINAL 667
V +RGNHE ++AL
Sbjct: 69 EEHWVRAVRGNHEQMALDAL 88
|
Length = 218 |
| >gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 9e-04
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 18/65 (27%)
Query: 29 PRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88
PR HT T++ RL LFGG + G L + V ++D+ T WT
Sbjct: 1 PRAYHTSTSIGDG-----RLYLFGG---------ENEDGSVL----SDVWVFDLSTNTWT 42
Query: 89 RIRPA 93
R+
Sbjct: 43 RLPSL 47
|
Length = 49 |
| >gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 0.001
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 99 PRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRV 143
PRA H + ++ G + +F GG G D++V DL+ + W R+
Sbjct: 1 PRAYHTSTSIGDGRLYLF-GGENEDGSVLSDVWVFDLSTN--TWTRL 44
|
Length = 49 |
| >gnl|CDD|184187 PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 26/145 (17%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYID---YLFLGDYVDRGQHSLETITLLLALK 645
+ GD+HG + + L ++ G+ ++G + D F+GD DRG HSL I ++ L
Sbjct: 5 IIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWEL- 63
Query: 646 IEYPEN-VHLIRGNHEAADINALFGFRL--------------ECIERMGENDGIWAWTRF 690
+ + + GNH N L+ F L E + + +F
Sbjct: 64 --VEKKAAYYVPGNH----CNKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKF 117
Query: 691 NQLFNCLPL-AALIEKKIICMHGGI 714
L+ PL L E +++ H GI
Sbjct: 118 ITLYEQAPLYHILDEGRLVVAHAGI 142
|
Length = 245 |
| >gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 36.5 bits (85), Expect = 0.002
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 16/64 (25%)
Query: 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHA 104
G ++ +FGG + G T N + +YD+ T W ++ G+ P PRA HA
Sbjct: 1 GGKIYVFGG---LGDGGTRL----------NDLWVYDLDTNTWEKL---GDLPGPRAGHA 44
Query: 105 AAAV 108
A +
Sbjct: 45 ATVI 48
|
Length = 48 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 889 | |||
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0373 | 306 | consensus Serine/threonine specific protein phosph | 100.0 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 100.0 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 100.0 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 100.0 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 100.0 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 100.0 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 100.0 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 100.0 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 100.0 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 100.0 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 100.0 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 100.0 | |
| KOG0371 | 319 | consensus Serine/threonine protein phosphatase 2A, | 100.0 | |
| KOG0375 | 517 | consensus Serine-threonine phosphatase 2B, catalyt | 100.0 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 100.0 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| PLN02153 | 341 | epithiospecifier protein | 100.0 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 100.0 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 100.0 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 100.0 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 100.0 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 99.98 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 99.98 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 99.98 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 99.98 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 99.97 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 99.97 | |
| PLN02153 | 341 | epithiospecifier protein | 99.97 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.97 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 99.96 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 99.96 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.96 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 99.95 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 99.94 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 99.94 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 99.94 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.94 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.92 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 99.89 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 99.88 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 99.85 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 99.84 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 99.84 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 99.84 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 99.83 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 99.82 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 99.79 | |
| PHA02239 | 235 | putative protein phosphatase | 99.79 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 99.78 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 99.74 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.65 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.59 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.59 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.27 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.0 | |
| COG0639 | 155 | ApaH Diadenosine tetraphosphatase and related seri | 98.85 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.77 | |
| PLN02772 | 398 | guanylate kinase | 98.73 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.73 | |
| PLN02772 | 398 | guanylate kinase | 98.72 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.71 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.69 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.65 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 98.63 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.54 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.52 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.5 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.5 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.42 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 98.42 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.41 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 98.39 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.38 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.36 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.34 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.33 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.28 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 98.28 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.27 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 98.14 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.12 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 98.11 | |
| smart00612 | 47 | Kelch Kelch domain. | 97.94 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 97.93 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 97.76 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 97.71 | |
| smart00612 | 47 | Kelch Kelch domain. | 97.68 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 97.63 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 97.62 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 97.62 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 97.62 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 97.55 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.51 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 97.49 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 97.43 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 97.39 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 97.34 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 97.19 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.09 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.08 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 97.06 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.98 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 96.88 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.88 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 96.86 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 96.86 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.85 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 96.83 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.81 | |
| KOG0918 | 476 | consensus Selenium-binding protein [Inorganic ion | 96.73 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 96.73 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 96.72 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 96.67 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 96.6 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 96.51 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 96.51 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 96.5 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.5 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 96.48 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.27 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 96.23 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 96.21 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 96.21 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 96.11 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 95.99 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 95.93 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 95.52 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 95.48 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 95.42 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 95.18 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 95.09 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 95.06 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 94.97 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 94.86 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 94.67 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 94.48 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 94.38 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 94.22 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 94.08 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 93.85 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 93.8 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 93.54 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 93.33 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 92.94 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 92.88 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 92.77 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 91.43 | |
| PLN02533 | 427 | probable purple acid phosphatase | 91.41 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 89.98 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 89.71 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 89.36 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 88.8 | |
| PF08321 | 95 | PPP5: PPP5 TPR repeat region; InterPro: IPR013235 | 88.26 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 87.63 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 86.63 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 85.71 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 84.72 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 84.45 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 83.81 | |
| PF06874 | 640 | FBPase_2: Firmicute fructose-1,6-bisphosphatase; I | 83.62 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 83.11 | |
| PF02191 | 250 | OLF: Olfactomedin-like domain; InterPro: IPR003112 | 80.23 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 80.08 |
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-80 Score=610.94 Aligned_cols=284 Identities=41% Similarity=0.724 Sum_probs=272.4
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~ 614 (889)
+++.|+.|.+.. ++.+.++..||.++++||.+|++|+.+..|++|||||||||.||+.+|+..|-++..
T Consensus 3 ldr~ie~L~~~~----------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t- 71 (303)
T KOG0372|consen 3 LDRQIEQLRRCE----------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPET- 71 (303)
T ss_pred HHHHHHHHHhcC----------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCC-
Confidence 478899998873 689999999999999999999999999999999999999999999999999988877
Q ss_pred CcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhc
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|+|||||||||.+|+|+++||++||++||++|+|||||||++.++..|||++||.+|||. ..+|+.+.++|
T Consensus 72 -----~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~---~~vWr~c~eiF 143 (303)
T KOG0372|consen 72 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS---ANVWRYCTEIF 143 (303)
T ss_pred -----ceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCC---hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999985 47999999999
Q ss_pred CCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHH
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774 (889)
Q Consensus 695 ~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 774 (889)
++||++|+|+++|||||||++|++.++|||+.+.|-.+++..+ .++|||||||.+ ..||..++||+| +.||.+++
T Consensus 144 dyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g-~m~DllWSDPee---~~g~~~SPRGaG-ylFG~dvv 218 (303)
T KOG0372|consen 144 DYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDG-AMCDLLWSDPEE---GPGWGLSPRGAG-YLFGEDVV 218 (303)
T ss_pred HhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCC-cchheeccCccc---CCCcccCCCCcc-ccccHHHH
Confidence 9999999999999999999999999999999999999999877 899999999987 359999999999 79999999
Q ss_pred HHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCC
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLP 842 (889)
Q Consensus 775 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~ 842 (889)
++||+.||+++|+|+||.|++||++.++++|+|||||||||++++|.||||.++++....|++|...+
T Consensus 219 ~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~ 286 (303)
T KOG0372|consen 219 ESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAP 286 (303)
T ss_pred HHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999997654
|
|
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-74 Score=626.11 Aligned_cols=295 Identities=52% Similarity=0.931 Sum_probs=277.1
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhC-CCCCC
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYG-FPSTA 613 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g-~~~~~ 613 (889)
++++|..++..............|+++||.+||..+.++|..+|+++++++||+|||||||||.||+++|+..| +|++.
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~ 88 (331)
T KOG0374|consen 9 LDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQ 88 (331)
T ss_pred HHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcc
Confidence 56777777776543334444456999999999999999999999999999999999999999999999999999 99877
Q ss_pred CCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhh
Q 002713 614 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQL 693 (889)
Q Consensus 614 ~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~ 693 (889)
+|||||||||||++|+||++||+++|++||++|++||||||++.+|..|||++||.++|+. ..+|+.|+++
T Consensus 89 ------~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~---~~~w~~F~~~ 159 (331)
T KOG0374|consen 89 ------NYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE---IKLWKAFNDA 159 (331)
T ss_pred ------cEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch---HHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999964 5799999999
Q ss_pred cCCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHH
Q 002713 694 FNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDR 773 (889)
Q Consensus 694 f~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~ 773 (889)
|++||++|+|++||+|+||||+|.+.++++|+.|.||.+.++.+ +++|||||||+. .+.+|.+|.||.+ +.||+++
T Consensus 160 f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~g-ll~DLlWsdp~~--~~~g~~~n~Rg~s-~~fg~~~ 235 (331)
T KOG0374|consen 160 FNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKG-LLCDLLWSDPDD--DVPGWEENDRGVS-FTFGPAV 235 (331)
T ss_pred HhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccc-eeeeeeecCCCC--CCCCcccCCCcee-eEecHHH
Confidence 99999999999999999999999999999999999998887766 999999999986 4789999999999 8999999
Q ss_pred HHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCC
Q 002713 774 VSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLP 842 (889)
Q Consensus 774 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~ 842 (889)
+++||+++++++||||||+|+|||++|++++++||||||+|||.++|+||+|.|++++.+++++++|..
T Consensus 236 v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~ 304 (331)
T KOG0374|consen 236 VEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEG 304 (331)
T ss_pred HHHHHHHhCcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEecccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999953
|
|
| >KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-73 Score=549.45 Aligned_cols=285 Identities=38% Similarity=0.710 Sum_probs=270.3
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~ 614 (889)
.++.|+...+.+ .|+++|+..||+.++++|..|.+++.++.|+.|||||||||.||+++|+..|-.|+.
T Consensus 6 ~d~wi~~vk~ck----------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~t- 74 (306)
T KOG0373|consen 6 LDQWIETVKKCK----------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDT- 74 (306)
T ss_pred HHHHHHHHHHcC----------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCc-
Confidence 356677665553 689999999999999999999999999999999999999999999999999877765
Q ss_pred CcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhc
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|||+|||||||.+|+|++.+|+.||.+||.+|.|||||||.+.+...|||++||..+||.. ..|+.+.++|
T Consensus 75 -----nYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna---n~wkycckVF 146 (306)
T KOG0373|consen 75 -----NYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA---NVWKYCCKVF 146 (306)
T ss_pred -----ceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc---hHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999865 7999999999
Q ss_pred CCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHH
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774 (889)
Q Consensus 695 ~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 774 (889)
+.|++||+|+++|+|||||+||++.++|||+.|.|..++|.++ .+|||+||||++ ++.|..++||+| +.||.+++
T Consensus 147 D~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G-~fcDlmWSDPed---ve~W~vSpRGAG-wlFGskVt 221 (306)
T KOG0373|consen 147 DFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEG-PFCDLMWSDPED---VETWAVSPRGAG-WLFGSKVT 221 (306)
T ss_pred hhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCC-CccceeccChhh---hhhheeCCCCcc-eeechhhh
Confidence 9999999999999999999999999999999999999999887 799999999985 788999999999 68999999
Q ss_pred HHHHHhcCCeEEEEeccccccceEEecCCe-EEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQ-LITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP 843 (889)
Q Consensus 775 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~-~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 843 (889)
.+|+..|+|++|+|+||.|++||++++++| |+|||||||||++++|.|+||.++++++-++|+|..+|.
T Consensus 222 ~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd 291 (306)
T KOG0373|consen 222 TEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPD 291 (306)
T ss_pred HHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCC
Confidence 999999999999999999999999999988 999999999999999999999999999999999987654
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-70 Score=589.74 Aligned_cols=294 Identities=47% Similarity=0.860 Sum_probs=275.5
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~ 614 (889)
++++|+.+++.+.+++. ....|+++|+.+||++|+++|++||+++++.+|++|||||||||.+|+++|+..++++.+
T Consensus 11 ~~~~i~~~~~~~~~~~~--~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~- 87 (320)
T PTZ00480 11 VDNIIERLLSVRGSKPG--KNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES- 87 (320)
T ss_pred HHHHHHHHHhccccCcc--ccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc-
Confidence 68899999987766542 224689999999999999999999999999999999999999999999999999998876
Q ss_pred CcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhc
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|||||||||||++++||+.+|+++|+.+|.+|++||||||.+.++..|||..||..+|+ ..+|..++++|
T Consensus 88 -----~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~----~~l~~~~~~~F 158 (320)
T PTZ00480 88 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT----IKLWKTFTDCF 158 (320)
T ss_pred -----eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999994 46999999999
Q ss_pred CCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHH
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774 (889)
Q Consensus 695 ~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 774 (889)
++||+||+|++++|||||||+|.+.++++|+.++||.+.+..+ +++|+|||||.. ...+|.+|+||.| +.||++++
T Consensus 159 ~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWSDP~~--~~~~~~~s~RG~g-~~FG~~~~ 234 (320)
T PTZ00480 159 NCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTG-LLCDLLWSDPDK--DVQGWADNERGVS-YVFSQEIV 234 (320)
T ss_pred HhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccc-hhhheeecCccc--ccCCCccCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887654 899999999985 3578999999999 68999999
Q ss_pred HHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPP 844 (889)
Q Consensus 775 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 844 (889)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++++.+.++.|.|.+..
T Consensus 235 ~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 235 QVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred HHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999876543
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-69 Score=585.56 Aligned_cols=285 Identities=33% Similarity=0.587 Sum_probs=256.6
Q ss_pred HHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecC----CeEEEecCCCCHHHHHHHHHHhCC
Q 002713 534 LHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRA----PVKVFGDLHGQFGDLMRLFDEYGF 609 (889)
Q Consensus 534 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~----~i~vvGDiHG~~~~l~~il~~~g~ 609 (889)
.++++|+.|++.. .|+++++.+||++|+++|++||+|+++.. |++|||||||||.||+++|+..|+
T Consensus 6 ~~~~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~ 75 (321)
T cd07420 6 HIDALIEAFKEKQ----------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGL 75 (321)
T ss_pred HHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCC
Confidence 3688999998753 47899999999999999999999999986 899999999999999999999998
Q ss_pred CCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhh
Q 002713 610 PSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTR 689 (889)
Q Consensus 610 ~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~ 689 (889)
|+... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||..+|+.. ...+|..
T Consensus 76 ~~~~~-----~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~-~~~l~~~ 149 (321)
T cd07420 76 PSPEN-----PYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLH-GKKILRL 149 (321)
T ss_pred CCccc-----eEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCcc-HHHHHHH
Confidence 86532 79999999999999999999999999999999999999999999999999999999999753 4679999
Q ss_pred hhhhcCCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCccc-----CC---------------------CCchhhcc
Q 002713 690 FNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITM-----DA---------------------GSIILMDL 743 (889)
Q Consensus 690 ~~~~f~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~-----~~---------------------~~~~~~dl 743 (889)
++++|++||+||+|+++||||||||++ ..++++|+.|+|+... +. ...+++|+
T Consensus 150 ~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 228 (321)
T cd07420 150 LEDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDI 228 (321)
T ss_pred HHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhhee
Confidence 999999999999999999999999997 5799999999884211 11 01368899
Q ss_pred ccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEE
Q 002713 744 LWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGA 823 (889)
Q Consensus 744 lWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga 823 (889)
|||||.+. ...|.+++||.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+..+|+||
T Consensus 229 LWSDP~~~--~~~~~~~~RG~g-~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~ga 305 (321)
T cd07420 229 LWSDPKAQ--KGCKPNTFRGGG-CYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGA 305 (321)
T ss_pred eecCCccC--CCCCccCCCCCc-cccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEE
Confidence 99999853 233666789999 689999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCceEEeEEe
Q 002713 824 ILVVGRGLVVVPKLI 838 (889)
Q Consensus 824 ~l~~~~~~~~~~~~~ 838 (889)
+|+|++++.+.++.|
T Consensus 306 vl~i~~~~~~~f~~~ 320 (321)
T cd07420 306 YIKLGPDLTPHFVQY 320 (321)
T ss_pred EEEECCCCceeEEEe
Confidence 999999998887765
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-69 Score=586.61 Aligned_cols=303 Identities=74% Similarity=1.267 Sum_probs=279.5
Q ss_pred HHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCC--CC
Q 002713 538 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTA--GD 615 (889)
Q Consensus 538 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~--~~ 615 (889)
+|+.||+|+.|+++....+.|+++|+.+||++|+++|++||+++++.+|++|||||||||.+|+++|+.+++++.. ++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 4788999999999888888999999999999999999999999999999999999999999999999999988641 22
Q ss_pred cceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCC--Cchhhhhhhhhh
Q 002713 616 ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGEN--DGIWAWTRFNQL 693 (889)
Q Consensus 616 ~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~--~~~~~~~~~~~~ 693 (889)
....+|||||||||||++|+|||.+|++||+.+|.+|++||||||.+.++..|||..||..+|+.. ++..+|..++++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 222379999999999999999999999999999999999999999999999999999999999762 335699999999
Q ss_pred cCCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCC---CCCce-EEe
Q 002713 694 FNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNA---RGPGL-VTF 769 (889)
Q Consensus 694 f~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~---rg~~~-~~f 769 (889)
|++||++++++++++||||||+|.+.++++|+.+.||...+....+++|+|||||...+...+|.+|+ ||.|. +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999998544444589999999999765567888887 99995 799
Q ss_pred CHHHHHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEecc
Q 002713 770 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 840 (889)
Q Consensus 770 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~ 840 (889)
|++++++||++||+++||||||++++||+++++++|||||||||||+.++|+||+|+++++++++|++|+|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-68 Score=573.21 Aligned_cols=283 Identities=42% Similarity=0.754 Sum_probs=267.3
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~ 614 (889)
++++|+.+++.. .|+++++.+||++|+++|++||+++++..|++||||||||+.+|+++|+..++++.+
T Consensus 2 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~- 70 (285)
T cd07415 2 LDKWIEQLKKCE----------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDT- 70 (285)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCC-
Confidence 467888888643 478999999999999999999999999999999999999999999999999988765
Q ss_pred CcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhc
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|||||||||||++++||+.+|++||+.+|.++++||||||.+.++..|||.+||..+|+. ..+|..++++|
T Consensus 71 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~---~~l~~~~~~~f 142 (285)
T cd07415 71 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN---ANVWKYCTDLF 142 (285)
T ss_pred -----eEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc---hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999974 36999999999
Q ss_pred CCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHH
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774 (889)
Q Consensus 695 ~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 774 (889)
++||++|++++++|||||||+|.+.++++|+.++||.+++..+ +++|+|||||... .+|.+|+||.| +.||++++
T Consensus 143 ~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~~---~~~~~~~Rg~g-~~fg~~~~ 217 (285)
T cd07415 143 DYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEG-PMCDLLWSDPDDI---EGWGISPRGAG-YLFGQDVV 217 (285)
T ss_pred HHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCC-CccceEecCCCcc---CCCCcCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887655 7899999999863 68999999999 78999999
Q ss_pred HHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccC
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPL 841 (889)
Q Consensus 775 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~ 841 (889)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++++++.++.|.|.
T Consensus 218 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~ 284 (285)
T cd07415 218 EEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAA 284 (285)
T ss_pred HHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999874
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-68 Score=574.58 Aligned_cols=290 Identities=41% Similarity=0.781 Sum_probs=270.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCC
Q 002713 534 LHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTA 613 (889)
Q Consensus 534 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~ 613 (889)
+++++|..+++...+.. .....++.+++.+||++|+++|++||+++++.+|++|||||||||.+|+++|+..++++.+
T Consensus 3 ~~~~~i~~~~~~~~~~~--~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~ 80 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRT--QRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYS 80 (294)
T ss_pred hHHHHHHHHHhcccCCC--ccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcc
Confidence 46889999998654432 2344789999999999999999999999999999999999999999999999999998776
Q ss_pred CCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhh
Q 002713 614 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQL 693 (889)
Q Consensus 614 ~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~ 693 (889)
+|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||.+||..+|+ ..+|..+.++
T Consensus 81 ------~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~----~~l~~~~~~~ 150 (294)
T PTZ00244 81 ------NYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN----IKLFKAFTDV 150 (294)
T ss_pred ------cEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh----HHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 4699999999
Q ss_pred cCCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHH
Q 002713 694 FNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDR 773 (889)
Q Consensus 694 f~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~ 773 (889)
|+.||++|++++++|||||||+|.+.++++|+.++||.+.+..+ +++|+|||||.. ...+|.+|+||.| +.||+++
T Consensus 151 f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~~ 226 (294)
T PTZ00244 151 FNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRG-ILCDLLWADPED--EVRGFLESDRGVS-YLFGEDI 226 (294)
T ss_pred HHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccc-hhheeeecCccc--ccCCCCcCCCCCc-cccCHHH
Confidence 99999999999999999999999999999999999999877654 899999999985 3578999999999 7999999
Q ss_pred HHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEec
Q 002713 774 VSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIH 839 (889)
Q Consensus 774 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~ 839 (889)
+++||++||+++||||||++++||+++++++||||||||||||..+|+||+|.|++++.+++++|.
T Consensus 227 ~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~ 292 (294)
T PTZ00244 227 VNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIP 292 (294)
T ss_pred HHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEee
Confidence 999999999999999999999999999999999999999999999999999999999999998764
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-68 Score=575.37 Aligned_cols=290 Identities=49% Similarity=0.900 Sum_probs=271.2
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~ 614 (889)
++++|+.+++.+.++. .....|+++++.+||++|+++|++||+++++++|++||||||||+.+|+++|+..++++.+
T Consensus 2 ~~~~i~~~~~~~~~~~--~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~- 78 (293)
T cd07414 2 IDSIIERLLEVRGSRP--GKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 78 (293)
T ss_pred HHHHHHHHHhccccCC--cccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcc-
Confidence 4678888888765543 2334689999999999999999999999999999999999999999999999999998776
Q ss_pred CcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhc
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|||||||||||++++||+.+|+++|++||.++++||||||.+.++..|||..||..+|+ ..+|..+.++|
T Consensus 79 -----~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~----~~l~~~~~~~f 149 (293)
T cd07414 79 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 149 (293)
T ss_pred -----eEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999985 46999999999
Q ss_pred CCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHH
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774 (889)
Q Consensus 695 ~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 774 (889)
++||++|++++++||||||++|.+.++++|+.++||.+.+..+ +++|+|||||.. ...+|.+|+||.| +.||++++
T Consensus 150 ~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~~~ 225 (293)
T cd07414 150 NCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGKDVV 225 (293)
T ss_pred HHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchh-hHhhhhccCccc--ccCCCccCCCCcc-eecCHHHH
Confidence 9999999999999999999999999999999999999877654 899999999986 3578999999999 68999999
Q ss_pred HHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEecc
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 840 (889)
Q Consensus 775 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~ 840 (889)
++||++||+++||||||++++||+++++++||||||||||||..+|+||+|.|++++.+.++.|+|
T Consensus 226 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~ 291 (293)
T cd07414 226 AKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 291 (293)
T ss_pred HHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999876
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-68 Score=572.72 Aligned_cols=285 Identities=41% Similarity=0.769 Sum_probs=266.3
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~ 614 (889)
++++|+.+++.. .|+++++.+||++|+++|++||+++++.+|++|||||||||.+|+++|+..+.++..
T Consensus 3 ~~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~- 71 (303)
T PTZ00239 3 IDRHIATLLNGG----------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNA- 71 (303)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc-
Confidence 477888887643 478999999999999999999999999999999999999999999999999987765
Q ss_pred CcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhc
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|||||||||||++++||+.+|++||+.+|.++++||||||.+.++..|||.+||..+|+.. .+|..++++|
T Consensus 72 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~---~~~~~~~~~f 143 (303)
T PTZ00239 72 -----NYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS---NPWRLFMDVF 143 (303)
T ss_pred -----eEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh---hHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999753 5899999999
Q ss_pred CCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHH
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774 (889)
Q Consensus 695 ~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 774 (889)
++||++|+|++++|||||||+|.+.++++|+.++||.+++..+ +++|+|||||.+ ..+|.+|+||.| +.||++++
T Consensus 144 ~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~---~~~~~~~~Rg~g-~~fg~~~~ 218 (303)
T PTZ00239 144 DCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMWSDPEE---VEYWAVNSRGAG-YLFGAKVT 218 (303)
T ss_pred HhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCC-CceeeEecCccc---cCCCccCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887665 789999999985 468999999999 68999999
Q ss_pred HHHHHhcCCeEEEEeccccccceEEecC-CeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQ-GQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP 843 (889)
Q Consensus 775 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~-~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 843 (889)
++||++||+++||||||++++||+++++ ++|||||||||||+..+|+||||.+++++++.++.|.|.+.
T Consensus 219 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~ 288 (303)
T PTZ00239 219 KEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPE 288 (303)
T ss_pred HHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCc
Confidence 9999999999999999999999998765 45999999999999999999999999999999999998754
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-67 Score=568.12 Aligned_cols=291 Identities=35% Similarity=0.639 Sum_probs=268.8
Q ss_pred CchHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCC----eEEEecCCCCHHHHHHHHHH
Q 002713 531 PQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDE 606 (889)
Q Consensus 531 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~----i~vvGDiHG~~~~l~~il~~ 606 (889)
+..+++++|+.+++.+ .|+.+++.+||++|+++|++||+++++..| ++|||||||||.+|+++|+.
T Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~ 81 (316)
T cd07417 12 TLEFVKEMIEWFKDQK----------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFEL 81 (316)
T ss_pred CHHHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHh
Confidence 4567889999998753 478999999999999999999999999876 99999999999999999999
Q ss_pred hCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhh
Q 002713 607 YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA 686 (889)
Q Consensus 607 ~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~ 686 (889)
.|+++..+ +|||||||||||++|+|||.+|++||+.+|++|++||||||.+.++..|||..||..+|+ ..+
T Consensus 82 ~g~~~~~~-----~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~----~~l 152 (316)
T cd07417 82 NGLPSETN-----PYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN----EQM 152 (316)
T ss_pred cCCCCccC-----eEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc----HHH
Confidence 99986542 799999999999999999999999999999999999999999999999999999999985 369
Q ss_pred hhhhhhhcCCCceEEEEcCeEEEecCCC-CCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCc
Q 002713 687 WTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPG 765 (889)
Q Consensus 687 ~~~~~~~f~~LPlaa~i~~~i~~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~ 765 (889)
|..+.++|++||+++++++++||||||| ++.+.++++|++++||.+.+..+ +++|+|||||.+ ..+|.+|+||.|
T Consensus 153 ~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~---~~~~~~s~Rg~g 228 (316)
T cd07417 153 FDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSG-LMCELLWSDPQP---QPGRSPSKRGVG 228 (316)
T ss_pred HHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccc-cceeeeecCCCC---CCCCCccCCCCc
Confidence 9999999999999999999999999999 56789999999999997766544 899999999985 358999999999
Q ss_pred eEEeCHHHHHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcC-CceEEeEEeccCCCC
Q 002713 766 LVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGR-GLVVVPKLIHPLPPP 844 (889)
Q Consensus 766 ~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~-~~~~~~~~~~~~~~~ 844 (889)
+.||++++++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++ ++++.++.|.|.+..
T Consensus 229 -~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 229 -CQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred -eEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 699999999999999999999999999999999999999999999999999999999999999 899999999887654
Q ss_pred C
Q 002713 845 L 845 (889)
Q Consensus 845 ~ 845 (889)
+
T Consensus 308 ~ 308 (316)
T cd07417 308 N 308 (316)
T ss_pred C
Confidence 4
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-66 Score=560.08 Aligned_cols=286 Identities=37% Similarity=0.649 Sum_probs=261.5
Q ss_pred HHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCCC
Q 002713 536 KKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGD 615 (889)
Q Consensus 536 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~ 615 (889)
+-+++.+.+.. .|+++++.+||++|+++|++||+++++++|++||||||||+.||+++|+..+.++.+
T Consensus 4 ~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~-- 71 (305)
T cd07416 4 DVLKAHFMREG----------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT-- 71 (305)
T ss_pred HHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc--
Confidence 45666666553 478999999999999999999999999999999999999999999999999988766
Q ss_pred cceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhcC
Q 002713 616 ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFN 695 (889)
Q Consensus 616 ~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~ 695 (889)
+|||||||||||++|+||+.+|++||+.+|.+|++||||||.+.++..|||..||..+|+ ..+|..+.++|+
T Consensus 72 ----~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f~ 143 (305)
T cd07416 72 ----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMEAFD 143 (305)
T ss_pred ----eEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc----HHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999884 469999999999
Q ss_pred CCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCC----CCcccC-CCCCceEEeC
Q 002713 696 CLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSI----EGLRPN-ARGPGLVTFG 770 (889)
Q Consensus 696 ~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~----~~~~~n-~rg~~~~~fg 770 (889)
.||++|++++++|||||||+|.+.++++|+.++||.+.+..+ +++|+|||||...... .+|.+| +||.| +.||
T Consensus 144 ~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g-~~fG 221 (305)
T cd07416 144 CLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFG-PMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCS-YFYS 221 (305)
T ss_pred hccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCC-cceeeeecCcccccccccccccccccCCCCCc-eecC
Confidence 999999999999999999999999999999999998876655 7899999999864321 358776 89999 7999
Q ss_pred HHHHHHHHHhcCCeEEEEeccccccceEEecCC------eEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 002713 771 PDRVSDFCKRNKLQLIIRAHECVMDGFERFAQG------QLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPP 844 (889)
Q Consensus 771 ~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 844 (889)
++++++||++||+++||||||++++||++++++ +||||||||||||..+|+||+|.++++. +.++.|.+.|-+
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~ 300 (305)
T cd07416 222 YRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 300 (305)
T ss_pred HHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCC
Confidence 999999999999999999999999999998887 9999999999999999999999999985 688888776543
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-66 Score=551.17 Aligned_cols=269 Identities=48% Similarity=0.880 Sum_probs=255.6
Q ss_pred cCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHH
Q 002713 558 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLET 637 (889)
Q Consensus 558 ~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~ev 637 (889)
++++++.+||++|+++|++||+++++++|++||||||||+.+|+++|+..+.++.+ +|||||||||||++++||
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~------~~vfLGD~VDrG~~s~e~ 74 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDT------NYVFLGDYVDRGPFSIEV 74 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCc------eEEEeCCccCCCCChHHH
Confidence 35789999999999999999999999999999999999999999999999987766 899999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEEcCeEEEecCCCCCC
Q 002713 638 ITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 717 (889)
Q Consensus 638 l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHgGi~~~ 717 (889)
+.+|++||+.+|.++++||||||.+.++..|||..||..+|+ ..+|..+.++|++||++|++++++|||||||+|.
T Consensus 75 l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~----~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~ 150 (271)
T smart00156 75 ILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG----EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD 150 (271)
T ss_pred HHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC----HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCc
Confidence 999999999999999999999999999999999999999985 4699999999999999999999999999999999
Q ss_pred CcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccce
Q 002713 718 IHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGF 797 (889)
Q Consensus 718 ~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~ 797 (889)
+.++++|+.++||.+.+... +++|+|||||.. ...+|.+|+||.| +.||++++++||++||+++||||||++++||
T Consensus 151 ~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 226 (271)
T smart00156 151 LTTLDDIRKLKRPQEPPDEG-LLIDLLWSDPDQ--PVDGFQPSIRGAS-YYFGPDAVDEFLKKNNLKLIIRAHQVVDDGY 226 (271)
T ss_pred cCCHHHHhcccCCCCCCchh-hhhheeecCCCc--ccCCCccCCCCCc-cccCHHHHHHHHHHCCCeEEEecCcccCCcE
Confidence 99999999999998776554 899999999974 3578999999999 6899999999999999999999999999999
Q ss_pred EEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEecc
Q 002713 798 ERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 840 (889)
Q Consensus 798 ~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~ 840 (889)
+++++++|||||||||||+..+|+||+|.+++++.+.++.+.|
T Consensus 227 ~~~~~~~~~TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~ 269 (271)
T smart00156 227 EFFHDRKLVTIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQFKP 269 (271)
T ss_pred EEecCCcEEEEECCcccccCCCceEEEEEECCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999998876
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=546.32 Aligned_cols=300 Identities=33% Similarity=0.585 Sum_probs=258.7
Q ss_pred CchHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeec----CCeEEEecCCCCHHHHHHHHHH
Q 002713 531 PQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFDE 606 (889)
Q Consensus 531 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~----~~i~vvGDiHG~~~~l~~il~~ 606 (889)
+.+.++.+|+.+.....--++......|+.+++.+||++|++||++||+|++++ +|++||||||||+.+|+++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 344567888877544221123334456899999999999999999999999998 8999999999999999999999
Q ss_pred hCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhh
Q 002713 607 YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA 686 (889)
Q Consensus 607 ~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~ 686 (889)
.|+++.+. +|||||||||||++|+|||.+|++||+.+|.+|++||||||.+.++..|||..||..+|+.. +..+
T Consensus 88 ~g~~~~~~-----~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~-~~~l 161 (377)
T cd07418 88 AGFPDQNR-----FYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDK-GKHV 161 (377)
T ss_pred hCCCCCCc-----eEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCch-HHHH
Confidence 99886542 69999999999999999999999999999999999999999999999999999999999754 4579
Q ss_pred hhhhhhhcCCCceEEEEcCeEEEecCCC---------------------------CCCCcCHHHhhcccCCc-ccCCCC-
Q 002713 687 WTRFNQLFNCLPLAALIEKKIICMHGGI---------------------------GRSIHSVEQIEKLERPI-TMDAGS- 737 (889)
Q Consensus 687 ~~~~~~~f~~LPlaa~i~~~i~~vHgGi---------------------------~~~~~~~~~i~~~~rp~-~~~~~~- 737 (889)
|+.++++|++||++|+|++++||||||| +|.+.++++|+.++||. +.+..+
T Consensus 162 ~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~ 241 (377)
T cd07418 162 YRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGS 241 (377)
T ss_pred HHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCc
Confidence 9999999999999999999999999999 44578999999999985 444332
Q ss_pred -chhhccccCCCCCCCCCCCcccC-CCCCceEEeCHHHHHHHHHhcCCeEEEEeccc------------cccceEEecC-
Q 002713 738 -IILMDLLWSDPTENDSIEGLRPN-ARGPGLVTFGPDRVSDFCKRNKLQLIIRAHEC------------VMDGFERFAQ- 802 (889)
Q Consensus 738 -~~~~dllWsdP~~~~~~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~------------~~~G~~~~~~- 802 (889)
.+++|||||||.. ..+|.+| .||.| +.||++++++||++|++++||||||+ |++||+++++
T Consensus 242 ~~i~~dlLWSDP~~---~~g~~~~~~RG~g-~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~ 317 (377)
T cd07418 242 NLIPGDVLWSDPSL---TPGLSPNKQRGIG-LLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDV 317 (377)
T ss_pred cccceeeEeeCCcc---CCCCCccCCCCCc-cccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccC
Confidence 2578999999985 3577777 79999 68999999999999999999999996 6899999887
Q ss_pred --CeEEEEecccccC------CCCCCeEEEEEEcCCc--eEEeEEecc
Q 002713 803 --GQLITLFSATNYC------GTANNAGAILVVGRGL--VVVPKLIHP 840 (889)
Q Consensus 803 --~~~itvfSa~~y~------~~~~n~ga~l~~~~~~--~~~~~~~~~ 840 (889)
++||||||||||| +.++|+||+++++.+- ...++.|..
T Consensus 318 ~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~ 365 (377)
T cd07418 318 ESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEA 365 (377)
T ss_pred CCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeec
Confidence 9999999999999 5789999999997643 455555543
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-64 Score=499.13 Aligned_cols=286 Identities=41% Similarity=0.722 Sum_probs=270.3
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~ 614 (889)
++.-|..|.+.+ ++++.++..||+.|+++|.+|.+|..++.|++||||+||||+||+++|+..|..++.
T Consensus 20 vd~~ie~L~~ck----------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdt- 88 (319)
T KOG0371|consen 20 VDPWIEQLYKCK----------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDT- 88 (319)
T ss_pred cccchHHHHhcC----------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCc-
Confidence 466778887764 578889999999999999999999999999999999999999999999888887766
Q ss_pred CcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhc
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|+|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|||++||++|||.. .+|+.|.+.|
T Consensus 89 -----nylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a---nvw~~Ftdlf 160 (319)
T KOG0371|consen 89 -----NYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 160 (319)
T ss_pred -----ceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc---cchHHhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999864 6999999999
Q ss_pred CCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHH
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774 (889)
Q Consensus 695 ~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 774 (889)
+++|+.|+|+++|||+|||++|++.+++.++.+.|-.+++.++ .+||||||||++ .-||..++||+| +.||.+..
T Consensus 161 dy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evpheg-pmcDlLwsdpdd---r~gwg~sprgag-~tfg~di~ 235 (319)
T KOG0371|consen 161 DYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEG-PMCDLLWSDPDD---RCGWGISPRGAG-YTFGQDIS 235 (319)
T ss_pred hccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCC-ChhheeccCccc---CCCCCCCCCCCC-cccchhhH
Confidence 9999999999999999999999999999999999988888877 688999999985 689999999999 79999999
Q ss_pred HHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPP 844 (889)
Q Consensus 775 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 844 (889)
++|-.+||+++|-|+||.+++||.+.+...++|||||||||+.++|.+|+|.+++.....+..|.|.|..
T Consensus 236 ~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k 305 (319)
T KOG0371|consen 236 EQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRK 305 (319)
T ss_pred HHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999986543
|
|
| >KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-63 Score=513.74 Aligned_cols=273 Identities=38% Similarity=0.665 Sum_probs=250.4
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceEeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHH
Q 002713 557 FLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLE 636 (889)
Q Consensus 557 ~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~e 636 (889)
.|+++..++|+.++..+|++|++++++++||.|||||||||.||+++|+..|-|... +|+|||||||||..|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t------~YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT------RYLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccc------eeEeeccccccceeeee
Confidence 478999999999999999999999999999999999999999999999999888766 99999999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEEcCeEEEecCCCCC
Q 002713 637 TITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 716 (889)
Q Consensus 637 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHgGi~~ 716 (889)
|+.+|.+||+.||..++|||||||++.+...|.|..||+.+|.. .+|+.+.+.|++|||||+.++++||||||++|
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse----~vYdaCmesFd~LPLAAlmNqQflCVHGGlSP 209 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMESFDCLPLAALMNQQFLCVHGGLSP 209 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccH----HHHHHHHHHhccchHHHHhcCceEEecCCCCc
Confidence 99999999999999999999999999999999999999999954 69999999999999999999999999999999
Q ss_pred CCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCC----CCCcccC-CCCCceEEeCHHHHHHHHHhcCCeEEEEecc
Q 002713 717 SIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDS----IEGLRPN-ARGPGLVTFGPDRVSDFCKRNKLQLIIRAHE 791 (889)
Q Consensus 717 ~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~----~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~ 791 (889)
.+.+++||++|.|..++|..+ .+||||||||.++.+ .+.|.+| .||++ |.|...++.+||+.|||--|||+||
T Consensus 210 Ei~tl~DIr~l~RF~EpPa~G-pmCDLLWsDPlEdfgnek~~e~f~hNsvRGCS-yfysy~A~C~FLq~nnLLSIiRAHE 287 (517)
T KOG0375|consen 210 EIHTLDDIRKLDRFKEPPAFG-PMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCS-YFYSYPAVCEFLQNNNLLSIIRAHE 287 (517)
T ss_pred ccccHHHHHhhhhccCCCccC-cchhhhccChhhhccccccccccccCcccccc-ceechHHHHHHHHhCCchhhhhhhh
Confidence 999999999999999999877 899999999987422 2456666 79999 7899999999999999999999999
Q ss_pred ccccceEEecCC------eEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCC
Q 002713 792 CVMDGFERFAQG------QLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLP 842 (889)
Q Consensus 792 ~~~~G~~~~~~~------~~itvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~ 842 (889)
.+..||..+... .||||||||||-+.++|+||||..+++. +..+.|.-.|
T Consensus 288 AQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV-MNIRQFncSP 343 (517)
T KOG0375|consen 288 AQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSP 343 (517)
T ss_pred hhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhccc-ceeeccCCCC
Confidence 999999876554 5899999999999999999999997764 3445554433
|
|
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-53 Score=446.77 Aligned_cols=284 Identities=33% Similarity=0.616 Sum_probs=250.2
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEeec----CCeEEEecCCCCHHHHHHHHHHhCCC
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFDEYGFP 610 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~----~~i~vvGDiHG~~~~l~~il~~~g~~ 610 (889)
++.+|+.+-..+ .|....+..|+.+|+++|++-|++-+++ ..|.||||+||.++||+-||.+.|+|
T Consensus 121 i~~lieaFk~kq----------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlP 190 (631)
T KOG0377|consen 121 IDLLIEAFKKKQ----------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLP 190 (631)
T ss_pred HHHHHHHHHHhh----------hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCC
Confidence 466776654332 5788889999999999999999999985 46999999999999999999999999
Q ss_pred CCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhh
Q 002713 611 STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRF 690 (889)
Q Consensus 611 ~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~ 690 (889)
+..+ .|||.||+||||.+|+|||++|+++.+.||..+||-|||||+..||..|||..|...+|... +..+...+
T Consensus 191 S~~n-----pYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~-~k~Ilr~l 264 (631)
T KOG0377|consen 191 SSSN-----PYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRH-GKRILRFL 264 (631)
T ss_pred CCCC-----CeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhc-ccHHHHHH
Confidence 9875 79999999999999999999999999999999999999999999999999999999999775 67788899
Q ss_pred hhhcCCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCC---------ccc--CC----------CCchhhccccCCCC
Q 002713 691 NQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERP---------ITM--DA----------GSIILMDLLWSDPT 749 (889)
Q Consensus 691 ~~~f~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp---------~~~--~~----------~~~~~~dllWsdP~ 749 (889)
.++|.|||++.+|+.+||+|||||+.. +.++-|.+|+|- ++. +. +-+-+.|+|||||.
T Consensus 265 eevy~WLPi~tiid~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~ 343 (631)
T KOG0377|consen 265 EEVYRWLPIGTIIDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQ 343 (631)
T ss_pred HHHHHhcchhhhcccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcc
Confidence 999999999999999999999999976 677777777652 211 00 11357899999998
Q ss_pred CCCCCCCcccC-CCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEc
Q 002713 750 ENDSIEGLRPN-ARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVG 828 (889)
Q Consensus 750 ~~~~~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~ 828 (889)
. ..|..|| -||.| ++||+|++.+||++++++++||+|||.++|||+.++++|+|||||+||.....|+||++.+.
T Consensus 344 ~---~~GC~pNt~RGgG-~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~ 419 (631)
T KOG0377|consen 344 A---TMGCVPNTLRGGG-CYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLG 419 (631)
T ss_pred c---ccCCCcccccCCc-ceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeC
Confidence 6 4688888 69999 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEeEEec
Q 002713 829 RGLVVVPKLIH 839 (889)
Q Consensus 829 ~~~~~~~~~~~ 839 (889)
+.++-.|....
T Consensus 420 ~~~~PhfvQY~ 430 (631)
T KOG0377|consen 420 NQLTPHFVQYQ 430 (631)
T ss_pred CCCCchHHHHH
Confidence 98865554443
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-47 Score=414.62 Aligned_cols=274 Identities=37% Similarity=0.655 Sum_probs=250.4
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceEeecC----CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCC
Q 002713 557 FLDSYEVGELCYAAEQIFMQEPTVLQLRA----PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ 632 (889)
Q Consensus 557 ~~~~~~~~~l~~~~~~~~~~e~~~l~~~~----~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~ 632 (889)
.|...-+..|+..+..++.++|+++++.. .+.|+||+||||.|++++|+..|.|+... .|+|.||+||||.
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~-----~ylfngdfv~rgs 256 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETN-----PYLFNGDFVDRGS 256 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcc-----cccccCceeeecc
Confidence 35556677899999999999999999875 48999999999999999999999998764 7999999999999
Q ss_pred ChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEEcCeEEEecC
Q 002713 633 HSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 712 (889)
Q Consensus 633 ~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHg 712 (889)
.|.|++..+++.|+.+|+++|++|||||...||..|||..|+..+|.+ ..+..+.++|.+||++.+|+++++.+||
T Consensus 257 ~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte----~~~~~f~~~f~~LPl~~~i~~~~~~~hg 332 (476)
T KOG0376|consen 257 WSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTE----EMFNLFSEVFIWLPLAHLINNKVLVMHG 332 (476)
T ss_pred cceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHH----HHHHhhhhhhccccchhhhcCceEEEec
Confidence 999999999999999999999999999999999999999999999965 4677777999999999999999999999
Q ss_pred CCCC-CCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEecc
Q 002713 713 GIGR-SIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHE 791 (889)
Q Consensus 713 Gi~~-~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~ 791 (889)
|+.. .-.++++|++|.|+...+..+ .++|+|||||.. ..|..++.||.| ..||+|+.++||+.|++++|||+||
T Consensus 333 glf~~~~v~l~d~r~i~r~~~~~~~~-~~~~~lws~pq~---~~g~s~S~r~~g-~~fG~d~t~~f~~~n~l~~i~rshe 407 (476)
T KOG0376|consen 333 GLFSPDGVTLEDFRNIDRFEQPPEEG-LMCELLWSDPQP---ANGRSPSKRGVG-LQFGPDVTERFLQDNNLDKIIRSHE 407 (476)
T ss_pred CcCCCCCccHHHHHhhhhccCCcccc-cccccccCCCcc---ccCCCccccCce-eeeCCCchhhHHhhcchHHHhhccc
Confidence 9964 456899999999995555444 899999999986 478999999999 5899999999999999999999999
Q ss_pred ccccceEEecCCeEEEEecccccCCCCCCeEEEEEEc-CCceEEeEEeccCCCC
Q 002713 792 CVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVG-RGLVVVPKLIHPLPPP 844 (889)
Q Consensus 792 ~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~~ 844 (889)
+.+.||++.++|+|+|||||||||...+|.||++.++ ++++..+..|.++|-.
T Consensus 408 ~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~ 461 (476)
T KOG0376|consen 408 VKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHP 461 (476)
T ss_pred cCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCC
Confidence 9999999999999999999999999999999999998 7788888888877654
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=349.29 Aligned_cols=307 Identities=22% Similarity=0.331 Sum_probs=241.5
Q ss_pred cceeecCC---CCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCC
Q 002713 17 ETYWDTDE---DAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPA 93 (889)
Q Consensus 17 ~~~w~~~~---~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~ 93 (889)
.++|.... ++|.||.+|+++++ +++||||||....... ..+++|+||+.+++|+.++.+
T Consensus 150 ~~~W~~~~~~~~~P~pR~~h~~~~~------~~~iyv~GG~~~~~~~------------~~~~v~~yD~~~~~W~~~~~~ 211 (470)
T PLN02193 150 LGKWIKVEQKGEGPGLRCSHGIAQV------GNKIYSFGGEFTPNQP------------IDKHLYVFDLETRTWSISPAT 211 (470)
T ss_pred hceEEEcccCCCCCCCccccEEEEE------CCEEEEECCcCCCCCC------------eeCcEEEEECCCCEEEeCCCC
Confidence 37898654 36899999999999 8899999997532211 358899999999999998877
Q ss_pred CCCCc-ccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecC
Q 002713 94 GEPPS-PRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGN 172 (889)
Q Consensus 94 g~~P~-~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~ 172 (889)
+..|. .|.+|++++++++||++||... ...++++|+||+.++ +|+.+.+.+..|.+|++|+++++++ +|||+||.
T Consensus 212 g~~P~~~~~~~~~v~~~~~lYvfGG~~~-~~~~ndv~~yD~~t~--~W~~l~~~~~~P~~R~~h~~~~~~~-~iYv~GG~ 287 (470)
T PLN02193 212 GDVPHLSCLGVRMVSIGSTLYVFGGRDA-SRQYNGFYSFDTTTN--EWKLLTPVEEGPTPRSFHSMAADEE-NVYVFGGV 287 (470)
T ss_pred CCCCCCcccceEEEEECCEEEEECCCCC-CCCCccEEEEECCCC--EEEEcCcCCCCCCCccceEEEEECC-EEEEECCC
Confidence 76665 4679999999999999999863 346799999999995 5999866555689999999988776 89999999
Q ss_pred CCCcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeEEEeCC
Q 002713 173 DGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAP 252 (889)
Q Consensus 173 ~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~ 252 (889)
+....++++++||+.++ +|+.++..+..|.+|..|++++ .+++||++||.+. ..+++++.||+.++ +|+.....
T Consensus 288 ~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~~R~~~~~~~-~~gkiyviGG~~g--~~~~dv~~yD~~t~-~W~~~~~~ 361 (470)
T PLN02193 288 SATARLKTLDSYNIVDK--KWFHCSTPGDSFSIRGGAGLEV-VQGKVWVVYGFNG--CEVDDVHYYDPVQD-KWTQVETF 361 (470)
T ss_pred CCCCCcceEEEEECCCC--EEEeCCCCCCCCCCCCCcEEEE-ECCcEEEEECCCC--CccCceEEEECCCC-EEEEeccC
Confidence 88888999999999999 9999987666778888877765 4678999999754 34799999999876 45444433
Q ss_pred CCCCCccceeEEEEECCEEEEEcCCCCCCC-----CccCCCcEEEEECCCCeEEeccCCccccCCCCCCCCCCCccCccc
Q 002713 253 GVAPSPRYQHAAVFVGARLHVTGGALRGGR-----AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMR 327 (889)
Q Consensus 253 ~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~-----~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~ 327 (889)
+..|.+|..|+++.++++|||+||...... .....+++++||+.+++|+.+..+... ...|.+
T Consensus 362 g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~W~~~~~~~~~------------~~~P~~ 429 (470)
T PLN02193 362 GVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLDKFGEE------------EETPSS 429 (470)
T ss_pred CCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcCEEEEcccCCCC------------CCCCCC
Confidence 556889999999999999999999853211 112357899999999999998765321 112447
Q ss_pred ccceEEE--EE-C-CEEEEEcCCCCCCCcccccccEEEccCCC
Q 002713 328 RCRHASA--SI-G-VRIYIYGGLKGAFCADILLDDFLVAENSP 366 (889)
Q Consensus 328 R~~h~~~--~v-~-~~lyv~GG~~~~~~~~~~~~d~~~l~~~~ 366 (889)
|..|+++ .+ + +.|++|||+.+. +..++|+|.++...
T Consensus 430 R~~~~~~~~~~~~~~~~~~fGG~~~~---~~~~~D~~~~~~~~ 469 (470)
T PLN02193 430 RGWTASTTGTIDGKKGLVMHGGKAPT---NDRFDDLFFYGIDS 469 (470)
T ss_pred CccccceeeEEcCCceEEEEcCCCCc---cccccceEEEecCC
Confidence 7666432 33 2 459999999762 67889999987553
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=333.85 Aligned_cols=307 Identities=22% Similarity=0.282 Sum_probs=231.5
Q ss_pred cccceeecCCC----CCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEe
Q 002713 15 TLETYWDTDED----APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRI 90 (889)
Q Consensus 15 ~~~~~w~~~~~----~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l 90 (889)
+....|..+.. +|.||.+|+++++ +++||||||...... ...+++|+||+.+++|+++
T Consensus 4 ~~~~~W~~~~~~~~~~P~pR~~h~~~~~------~~~iyv~GG~~~~~~------------~~~~~~~~yd~~~~~W~~~ 65 (341)
T PLN02153 4 TLQGGWIKVEQKGGKGPGPRCSHGIAVV------GDKLYSFGGELKPNE------------HIDKDLYVFDFNTHTWSIA 65 (341)
T ss_pred ccCCeEEEecCCCCCCCCCCCcceEEEE------CCEEEEECCccCCCC------------ceeCcEEEEECCCCEEEEc
Confidence 34566886654 7999999999999 889999999864321 1468999999999999999
Q ss_pred cCCCCCCcc-cCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeec--CCCCCCccccEEEEECCcEEE
Q 002713 91 RPAGEPPSP-RAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ--GQGPGPRYGHVMDLVSQRYLV 167 (889)
Q Consensus 91 ~~~g~~P~~-R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~--g~~p~~R~~hs~~~~~~~~ly 167 (889)
++++..|.. +.+|++++++++||+|||... ...++++|+||+.++ +|+.+... ...|.+|.+|++++.++ +||
T Consensus 66 ~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~-~~~~~~v~~yd~~t~--~W~~~~~~~~~~~p~~R~~~~~~~~~~-~iy 141 (341)
T PLN02153 66 PANGDVPRISCLGVRMVAVGTKLYIFGGRDE-KREFSDFYSYDTVKN--EWTFLTKLDEEGGPEARTFHSMASDEN-HVY 141 (341)
T ss_pred CccCCCCCCccCceEEEEECCEEEEECCCCC-CCccCcEEEEECCCC--EEEEeccCCCCCCCCCceeeEEEEECC-EEE
Confidence 877655543 558999999999999999854 345789999999985 49988431 22388999999988776 899
Q ss_pred EEecCCCCc------ccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCC-------CCcccc
Q 002713 168 SVSGNDGKR------VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS-------GAPLAD 234 (889)
Q Consensus 168 v~GG~~~~~------~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~-------~~~~~d 234 (889)
|+||.+... .++++++||+.++ +|..++.++..|.+|.+|++++ .+++|||+||.... ...+++
T Consensus 142 v~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~~~~ 218 (341)
T PLN02153 142 VFGGVSKGGLMKTPERFRTIEAYNIADG--KWVQLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYESNA 218 (341)
T ss_pred EECCccCCCccCCCcccceEEEEECCCC--eEeeCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCccceecCc
Confidence 999986432 4679999999999 9999998777778888887665 56789999986421 123678
Q ss_pred eEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCC-----CCccCCCcEEEEECCCCeEEeccCCccc
Q 002713 235 AYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGG-----RAIEGEAAVAVLDTAAGVWLDRNGLVTS 309 (889)
Q Consensus 235 v~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~-----~~~~~~~~v~~yD~~t~~W~~v~~~~~~ 309 (889)
++.||+.++ +|+.....+..|.+|..|++++++++|||+||..... ......+++++||+++++|+.+.....
T Consensus 219 v~~yd~~~~-~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~~~~~~~~- 296 (341)
T PLN02153 219 VQFFDPASG-KWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGECGE- 296 (341)
T ss_pred eEEEEcCCC-cEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccEEEeccCCCC-
Confidence 999999877 4443333345688999999999999999999974211 011125689999999999998864321
Q ss_pred cCCCCCCCCCCCccCcccccceEEEEE--CCEEEEEcCCCCCCCcccccccEEEcc
Q 002713 310 SRTSKGHGEHDPSLELMRRCRHASASI--GVRIYIYGGLKGAFCADILLDDFLVAE 363 (889)
Q Consensus 310 ~~~~~~~~~~~~~~~p~~R~~h~~~~v--~~~lyv~GG~~~~~~~~~~~~d~~~l~ 363 (889)
.+.|..|..++++.+ +++||||||.++. +..++|+|.+.
T Consensus 297 ------------~~~pr~~~~~~~~~v~~~~~~~~~gG~~~~---~~~~~~~~~~~ 337 (341)
T PLN02153 297 ------------PAMPRGWTAYTTATVYGKNGLLMHGGKLPT---NERTDDLYFYA 337 (341)
T ss_pred ------------CCCCCccccccccccCCcceEEEEcCcCCC---CccccceEEEe
Confidence 112345555555554 3489999998773 47788988764
|
|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=294.64 Aligned_cols=291 Identities=24% Similarity=0.379 Sum_probs=239.0
Q ss_pred eeecCCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCC-----
Q 002713 19 YWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPA----- 93 (889)
Q Consensus 19 ~w~~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~----- 93 (889)
.|+.-=+--..|.+|+++++ |.+||-|||+-....-.. .-.=|+++++..+.+|+++++.
T Consensus 3 ~WTVHLeGGPrRVNHAavaV------G~riYSFGGYCsGedy~~---------~~piDVH~lNa~~~RWtk~pp~~~ka~ 67 (392)
T KOG4693|consen 3 TWTVHLEGGPRRVNHAAVAV------GSRIYSFGGYCSGEDYDA---------KDPIDVHVLNAENYRWTKMPPGITKAT 67 (392)
T ss_pred eEEEEecCCcccccceeeee------cceEEecCCccccccccc---------CCcceeEEeeccceeEEecCccccccc
Confidence 46644333456899999999 899999999975432110 0123899999999999999873
Q ss_pred -----CCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEE
Q 002713 94 -----GEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVS 168 (889)
Q Consensus 94 -----g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv 168 (889)
...|-.|++|+.+.+++++|+.||.++.....+-+|+||+++ .+|.+....|-.|.+|.+|+++++++ .+||
T Consensus 68 i~~~yp~VPyqRYGHtvV~y~d~~yvWGGRND~egaCN~Ly~fDp~t--~~W~~p~v~G~vPgaRDGHsAcV~gn-~Myi 144 (392)
T KOG4693|consen 68 IESPYPAVPYQRYGHTVVEYQDKAYVWGGRNDDEGACNLLYEFDPET--NVWKKPEVEGFVPGARDGHSACVWGN-QMYI 144 (392)
T ss_pred ccCCCCccchhhcCceEEEEcceEEEEcCccCcccccceeeeecccc--ccccccceeeecCCccCCceeeEECc-EEEE
Confidence 124567999999999999999999988777889999999999 55999999999999999999999998 8999
Q ss_pred EecCCC--CcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCC--------CcccceEEE
Q 002713 169 VSGNDG--KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASG--------APLADAYGL 238 (889)
Q Consensus 169 ~GG~~~--~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~--------~~~~dv~~l 238 (889)
|||+.. +...+|++.+|+.|. +|..+...+.+|.-|.+|+++++. +++|||||+.... ...+.+..|
T Consensus 145 FGGye~~a~~FS~d~h~ld~~Tm--tWr~~~Tkg~PprwRDFH~a~~~~-~~MYiFGGR~D~~gpfHs~~e~Yc~~i~~l 221 (392)
T KOG4693|consen 145 FGGYEEDAQRFSQDTHVLDFATM--TWREMHTKGDPPRWRDFHTASVID-GMMYIFGGRSDESGPFHSIHEQYCDTIMAL 221 (392)
T ss_pred ecChHHHHHhhhccceeEeccce--eeeehhccCCCchhhhhhhhhhcc-ceEEEeccccccCCCccchhhhhcceeEEE
Confidence 999854 567899999999999 999999999999999999988755 8999999985442 223445566
Q ss_pred ecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEeccCCccccCCCCCCCC
Q 002713 239 LMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGE 318 (889)
Q Consensus 239 ~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~ 318 (889)
|..+ +.|.-....++.|.+|..|++.+++++||+|||+++.... -.+++|.||+.|..|..+..-..-
T Consensus 222 d~~T-~aW~r~p~~~~~P~GRRSHS~fvYng~~Y~FGGYng~ln~--HfndLy~FdP~t~~W~~I~~~Gk~--------- 289 (392)
T KOG4693|consen 222 DLAT-GAWTRTPENTMKPGGRRSHSTFVYNGKMYMFGGYNGTLNV--HFNDLYCFDPKTSMWSVISVRGKY--------- 289 (392)
T ss_pred eccc-cccccCCCCCcCCCcccccceEEEcceEEEecccchhhhh--hhcceeecccccchheeeeccCCC---------
Confidence 6654 4666665667889999999999999999999999765432 268999999999999998765442
Q ss_pred CCCccCcccccceEEEEECCEEEEEcCCCC
Q 002713 319 HDPSLELMRRCRHASASIGVRIYIYGGLKG 348 (889)
Q Consensus 319 ~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~ 348 (889)
|.+|.++++++.++++|+|||..-
T Consensus 290 ------P~aRRRqC~~v~g~kv~LFGGTsP 313 (392)
T KOG4693|consen 290 ------PSARRRQCSVVSGGKVYLFGGTSP 313 (392)
T ss_pred ------CCcccceeEEEECCEEEEecCCCC
Confidence 569999999999999999999443
|
|
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=305.90 Aligned_cols=309 Identities=26% Similarity=0.451 Sum_probs=257.7
Q ss_pred cCCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccC
Q 002713 22 TDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRA 101 (889)
Q Consensus 22 ~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~ 101 (889)
..++.|.||.||.++++ +.-|+||||... ++.+++++|+..+++|..-...|+.|++.+
T Consensus 25 ~tGPvPrpRHGHRAVai------kELiviFGGGNE---------------GiiDELHvYNTatnqWf~PavrGDiPpgcA 83 (830)
T KOG4152|consen 25 STGPVPRPRHGHRAVAI------KELIVIFGGGNE---------------GIIDELHVYNTATNQWFAPAVRGDIPPGCA 83 (830)
T ss_pred ccCCCCCccccchheee------eeeEEEecCCcc---------------cchhhhhhhccccceeecchhcCCCCCchh
Confidence 45678999999999999 778999999642 368999999999999999999999999999
Q ss_pred ccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEee----cCCCCCCccccEEEEECCcEEEEEecCCC---
Q 002713 102 AHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVV----QGQGPGPRYGHVMDLVSQRYLVSVSGNDG--- 174 (889)
Q Consensus 102 ~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~----~g~~p~~R~~hs~~~~~~~~lyv~GG~~~--- 174 (889)
+|+.++.+.+||+|||+.+-+.+++|+|.+.-+. |.|+++.+ .|.+|.+|.+|+.+++++ +.|+|||...
T Consensus 84 A~GfvcdGtrilvFGGMvEYGkYsNdLYELQasR--WeWkrlkp~~p~nG~pPCPRlGHSFsl~gn-KcYlFGGLaNdse 160 (830)
T KOG4152|consen 84 AFGFVCDGTRILVFGGMVEYGKYSNDLYELQASR--WEWKRLKPKTPKNGPPPCPRLGHSFSLVGN-KCYLFGGLANDSE 160 (830)
T ss_pred hcceEecCceEEEEccEeeeccccchHHHhhhhh--hhHhhcCCCCCCCCCCCCCccCceeEEecc-EeEEecccccccc
Confidence 9999999999999999988899999987766655 88999864 588999999999999996 8999999632
Q ss_pred ------CcccCcEEEEecCC--CCceEEEccCCCCCCCcccceEEEEec-----CCEEEEEccCCCCCCcccceEEEecc
Q 002713 175 ------KRVLSDAWALDTAQ--KPYVWQRLNPEGDRPSARMYATASARS-----DGMFLLCGGRDASGAPLADAYGLLMH 241 (889)
Q Consensus 175 ------~~~lndv~~yd~~t--~~~~W~~v~~~~~~P~~r~~~~a~~~~-----~~~l~v~GG~~~~~~~~~dv~~l~~~ 241 (889)
-+++||+|.+++.- +-..|...-..|..|.+|-.|+|+++. ..+|||+||..+ ..+.|+|.+|.+
T Consensus 161 DpknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P~pRESHTAViY~eKDs~~skmvvyGGM~G--~RLgDLW~Ldl~ 238 (830)
T KOG4152|consen 161 DPKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVIYTEKDSKKSKMVVYGGMSG--CRLGDLWTLDLD 238 (830)
T ss_pred CcccccchhhcceEEEEeccCCceEEEecccccCCCCCCcccceeEEEEeccCCcceEEEEccccc--ccccceeEEecc
Confidence 24799999999874 335799988889999999999999882 348999999754 469999999998
Q ss_pred cCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCC---C-------CCCccCCCcEEEEECCCCeEEeccCCccccC
Q 002713 242 RNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALR---G-------GRAIEGEAAVAVLDTAAGVWLDRNGLVTSSR 311 (889)
Q Consensus 242 ~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~---~-------~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~ 311 (889)
+- .|...+..+..|.||.-|++..+|++||||||..- . ...-...+++-++++++..|..+-.....
T Consensus 239 Tl-~W~kp~~~G~~PlPRSLHsa~~IGnKMyvfGGWVPl~~~~~~~~~hekEWkCTssl~clNldt~~W~tl~~d~~e-- 315 (830)
T KOG4152|consen 239 TL-TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTSSLACLNLDTMAWETLLMDTLE-- 315 (830)
T ss_pred ee-ecccccccCCCCCCcccccceeecceeEEecceeeeeccccccccccceeeeccceeeeeecchheeeeeecccc--
Confidence 65 77777788999999999999999999999999741 0 01111267889999999999987654211
Q ss_pred CCCCCCCCCCccCcccccceEEEEECCEEEEEcCCCC---CCCcccccccEEEccCCCCC
Q 002713 312 TSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG---AFCADILLDDFLVAENSPFQ 368 (889)
Q Consensus 312 ~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~---~~~~~~~~~d~~~l~~~~~~ 368 (889)
..-.|++|.+|++++++.+|||..|.+| +|.+..-+.|+|.||+..-+
T Consensus 316 ---------d~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQVCCkDlWyLdTekPp 366 (830)
T KOG4152|consen 316 ---------DNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTEKPP 366 (830)
T ss_pred ---------ccccccccccceeEEeccEEEEEeccchhhHhhccccchhhhhhhcccCCC
Confidence 1124789999999999999999999888 45666778899999976533
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-32 Score=312.68 Aligned_cols=281 Identities=23% Similarity=0.334 Sum_probs=223.2
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCc--EEEEECCC----CcEEEecCCCCCCcccCccEEEEECCEEEEEcCc
Q 002713 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNS--VHLYDVLT----RKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGI 118 (889)
Q Consensus 45 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~nd--v~~yD~~t----~~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~ 118 (889)
+++|+.|+|..... .+. +|++++.+ ++|.++.+.+..|.||++|++++++++||++||.
T Consensus 120 ~~~ivgf~G~~~~~---------------~~~ig~y~~~~~~~~~~~~W~~~~~~~~~P~pR~~h~~~~~~~~iyv~GG~ 184 (470)
T PLN02193 120 GGKIVGFHGRSTDV---------------LHSLGAYISLPSTPKLLGKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGE 184 (470)
T ss_pred CCeEEEEeccCCCc---------------EEeeEEEEecCCChhhhceEEEcccCCCCCCCccccEEEEECCEEEEECCc
Confidence 88999999986432 343 45557655 7999999888889999999999999999999997
Q ss_pred CC-CCCccCcEEEEEccCCceEEEEEeecCCCCC-CccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEc
Q 002713 119 GP-AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRL 196 (889)
Q Consensus 119 ~~-~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~-~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v 196 (889)
.. .....+++|+||+.+++ |..+...++.|. +|.+|+++++++ .||||||.+....++++|+||+.++ +|+++
T Consensus 185 ~~~~~~~~~~v~~yD~~~~~--W~~~~~~g~~P~~~~~~~~~v~~~~-~lYvfGG~~~~~~~ndv~~yD~~t~--~W~~l 259 (470)
T PLN02193 185 FTPNQPIDKHLYVFDLETRT--WSISPATGDVPHLSCLGVRMVSIGS-TLYVFGGRDASRQYNGFYSFDTTTN--EWKLL 259 (470)
T ss_pred CCCCCCeeCcEEEEECCCCE--EEeCCCCCCCCCCcccceEEEEECC-EEEEECCCCCCCCCccEEEEECCCC--EEEEc
Confidence 53 23355789999999954 998866666665 467888888886 8999999988788999999999999 99999
Q ss_pred cCCCCCCCcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcC
Q 002713 197 NPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGG 276 (889)
Q Consensus 197 ~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG 276 (889)
++++..|.+|.+|++++ .+++|||+||.+... .+++++.|++.++ +|+....++..|.+|.+|++++++++|||+||
T Consensus 260 ~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~-~~~~~~~yd~~t~-~W~~~~~~~~~~~~R~~~~~~~~~gkiyviGG 336 (470)
T PLN02193 260 TPVEEGPTPRSFHSMAA-DEENVYVFGGVSATA-RLKTLDSYNIVDK-KWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYG 336 (470)
T ss_pred CcCCCCCCCccceEEEE-ECCEEEEECCCCCCC-CcceEEEEECCCC-EEEeCCCCCCCCCCCCCcEEEEECCcEEEEEC
Confidence 88777789998888765 577999999986654 4789999999876 44433333445789999999999999999999
Q ss_pred CCCCCCCccCCCcEEEEECCCCeEEeccCCccccCCCCCCCCCCCccCcccccceEEEEECCEEEEEcCCCCCC-----C
Q 002713 277 ALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAF-----C 351 (889)
Q Consensus 277 ~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~~~-----~ 351 (889)
..+. ..+++++||+.+++|+++..+... |.+|..|++++++++||||||..... .
T Consensus 337 ~~g~-----~~~dv~~yD~~t~~W~~~~~~g~~---------------P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 396 (470)
T PLN02193 337 FNGC-----EVDDVHYYDPVQDKWTQVETFGVR---------------PSERSVFASAAVGKHIVIFGGEIAMDPLAHVG 396 (470)
T ss_pred CCCC-----ccCceEEEECCCCEEEEeccCCCC---------------CCCcceeEEEEECCEEEEECCccCCccccccC
Confidence 7532 158899999999999998765321 45899999999999999999975421 1
Q ss_pred cccccccEEEccCCCCC
Q 002713 352 ADILLDDFLVAENSPFQ 368 (889)
Q Consensus 352 ~~~~~~d~~~l~~~~~~ 368 (889)
.....+|++.++.....
T Consensus 397 ~~~~~ndv~~~D~~t~~ 413 (470)
T PLN02193 397 PGQLTDGTFALDTETLQ 413 (470)
T ss_pred ccceeccEEEEEcCcCE
Confidence 12356788888766544
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=321.40 Aligned_cols=266 Identities=22% Similarity=0.351 Sum_probs=231.9
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCc
Q 002713 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (889)
Q Consensus 45 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~ 124 (889)
.+.||++||...... ..+.+..||+.+++|..+.. +|.+|..+++++++++||++||++.+...
T Consensus 284 ~~~l~~vGG~~~~~~-------------~~~~ve~yd~~~~~w~~~a~---m~~~r~~~~~~~~~~~lYv~GG~~~~~~~ 347 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQ-------------SLRSVECYDPKTNEWSSLAP---MPSPRCRVGVAVLNGKLYVVGGYDSGSDR 347 (571)
T ss_pred CCeEEEECCCCCCCc-------------ccceeEEecCCcCcEeecCC---CCcccccccEEEECCEEEEEccccCCCcc
Confidence 568999999975221 58899999999999998884 45899999999999999999998655678
Q ss_pred cCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCC
Q 002713 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (889)
Q Consensus 125 ~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~ 204 (889)
++.+|+||+.+++ |..+ .+|+.+|.+|+++++++ .||++||.++...++++++||+.++ +|+.++++ +.
T Consensus 348 l~~ve~YD~~~~~--W~~~---a~M~~~R~~~~v~~l~g-~iYavGG~dg~~~l~svE~YDp~~~--~W~~va~m---~~ 416 (571)
T KOG4441|consen 348 LSSVERYDPRTNQ--WTPV---APMNTKRSDFGVAVLDG-KLYAVGGFDGEKSLNSVECYDPVTN--KWTPVAPM---LT 416 (571)
T ss_pred cceEEEecCCCCc--eecc---CCccCccccceeEEECC-EEEEEeccccccccccEEEecCCCC--cccccCCC---Cc
Confidence 8999999999966 9998 89999999999999997 9999999999999999999999999 99999887 45
Q ss_pred cccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCc
Q 002713 205 ARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAI 284 (889)
Q Consensus 205 ~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~ 284 (889)
+| +.++++..+++||++||.+.....++.+.+||+.++ +|...+.+ +.+|.+|++++++++||++||.++...
T Consensus 417 ~r-~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~---~W~~~~~M-~~~R~~~g~a~~~~~iYvvGG~~~~~~-- 489 (571)
T KOG4441|consen 417 RR-SGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETN---TWTLIAPM-NTRRSGFGVAVLNGKIYVVGGFDGTSA-- 489 (571)
T ss_pred ce-eeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCC---ceeecCCc-ccccccceEEEECCEEEEECCccCCCc--
Confidence 44 556666788899999999888768999999999999 99999888 799999999999999999999877222
Q ss_pred cCCCcEEEEECCCCeEEeccCCccccCCCCCCCCCCCccCcccccceEEEEECCEEEEEcCCCCC------CCccccccc
Q 002713 285 EGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGA------FCADILLDD 358 (889)
Q Consensus 285 ~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~~------~~~~~~~~d 358 (889)
..+++.||+++++|+.+..+.. +|..+++++++++||++||+++. .+|++..|.
T Consensus 490 --~~~VE~ydp~~~~W~~v~~m~~------------------~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 490 --LSSVERYDPETNQWTMVAPMTS------------------PRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETDT 549 (571)
T ss_pred --cceEEEEcCCCCceeEcccCcc------------------ccccccEEEECCEEEEEecccCccccceeEEcCCCCCc
Confidence 5679999999999999988844 99999999999999999998873 456666666
Q ss_pred EEEccC
Q 002713 359 FLVAEN 364 (889)
Q Consensus 359 ~~~l~~ 364 (889)
|.....
T Consensus 550 W~~~~~ 555 (571)
T KOG4441|consen 550 WTEVTE 555 (571)
T ss_pred eeeCCC
Confidence 665544
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=319.91 Aligned_cols=256 Identities=23% Similarity=0.397 Sum_probs=227.0
Q ss_pred CCCCCCCcccccceeecCCCCCCCcccceEEEeccccCCCCEEEEEcCCCC-CCCCCCCCCCCccccccCCcEEEEECCC
Q 002713 6 WLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATA-IEGGATSSAPGIRLAGVTNSVHLYDVLT 84 (889)
Q Consensus 6 ~~~~~~~yd~~~~~w~~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~-~~~~~~~~~~~~~~~~~~ndv~~yD~~t 84 (889)
....+.+||+.++.|...+++|.+|..|+++++ +++||++||... .. ..+++++||+.+
T Consensus 299 ~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~------~~~lYv~GG~~~~~~--------------~l~~ve~YD~~~ 358 (571)
T KOG4441|consen 299 SLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL------NGKLYVVGGYDSGSD--------------RLSSVERYDPRT 358 (571)
T ss_pred ccceeEEecCCcCcEeecCCCCcccccccEEEE------CCEEEEEccccCCCc--------------ccceEEEecCCC
Confidence 345678999999999999999999999999999 899999999984 22 589999999999
Q ss_pred CcEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCc
Q 002713 85 RKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQR 164 (889)
Q Consensus 85 ~~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~ 164 (889)
++|+.+++|. .+|..|+++++++.||++||.. +...++.+++||+.+++ |..+ ++++.+|++|+++++++
T Consensus 359 ~~W~~~a~M~---~~R~~~~v~~l~g~iYavGG~d-g~~~l~svE~YDp~~~~--W~~v---a~m~~~r~~~gv~~~~g- 428 (571)
T KOG4441|consen 359 NQWTPVAPMN---TKRSDFGVAVLDGKLYAVGGFD-GEKSLNSVECYDPVTNK--WTPV---APMLTRRSGHGVAVLGG- 428 (571)
T ss_pred CceeccCCcc---CccccceeEEECCEEEEEeccc-cccccccEEEecCCCCc--cccc---CCCCcceeeeEEEEECC-
Confidence 9999988665 8999999999999999999986 56688999999999965 9999 88999999999988886
Q ss_pred EEEEEecCCCCc-ccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccC
Q 002713 165 YLVSVSGNDGKR-VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243 (889)
Q Consensus 165 ~lyv~GG~~~~~-~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~ 243 (889)
+||++||.++.. +++.+.+||+.++ +|+.++++ +.+|.++. ++..+++||++||.+. ...+..+..||+.++
T Consensus 429 ~iYi~GG~~~~~~~l~sve~YDP~t~--~W~~~~~M---~~~R~~~g-~a~~~~~iYvvGG~~~-~~~~~~VE~ydp~~~ 501 (571)
T KOG4441|consen 429 KLYIIGGGDGSSNCLNSVECYDPETN--TWTLIAPM---NTRRSGFG-VAVLNGKIYVVGGFDG-TSALSSVERYDPETN 501 (571)
T ss_pred EEEEEcCcCCCccccceEEEEcCCCC--ceeecCCc---ccccccce-EEEECCEEEEECCccC-CCccceEEEEcCCCC
Confidence 999999999888 9999999999999 99999988 56776666 5567889999999988 445777999999988
Q ss_pred CeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEeccCC
Q 002713 244 GQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (889)
Q Consensus 244 ~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~ 306 (889)
+|..+..+ +.+|..++++.+++++|++||+.+... +++++.||+++++|+....+
T Consensus 502 ---~W~~v~~m-~~~rs~~g~~~~~~~ly~vGG~~~~~~----l~~ve~ydp~~d~W~~~~~~ 556 (571)
T KOG4441|consen 502 ---QWTMVAPM-TSPRSAVGVVVLGGKLYAVGGFDGNNN----LNTVECYDPETDTWTEVTEP 556 (571)
T ss_pred ---ceeEcccC-ccccccccEEEECCEEEEEecccCccc----cceeEEcCCCCCceeeCCCc
Confidence 88888655 689999999999999999999776554 88999999999999999883
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-31 Score=298.02 Aligned_cols=280 Identities=21% Similarity=0.291 Sum_probs=210.0
Q ss_pred CCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEEC--CCCcEEEecCCCCCC-ccc
Q 002713 24 EDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDV--LTRKWTRIRPAGEPP-SPR 100 (889)
Q Consensus 24 ~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~--~t~~W~~l~~~g~~P-~~R 100 (889)
+++|.+|..++++++ +++|||+||.. .+++|+||+ .+++|.+++.+ | .+|
T Consensus 2 ~~lp~~~~~~~~~~~------~~~vyv~GG~~------------------~~~~~~~d~~~~~~~W~~l~~~---p~~~R 54 (346)
T TIGR03547 2 PDLPVGFKNGTGAII------GDKVYVGLGSA------------------GTSWYKLDLKKPSKGWQKIADF---PGGPR 54 (346)
T ss_pred CCCCccccCceEEEE------CCEEEEEcccc------------------CCeeEEEECCCCCCCceECCCC---CCCCc
Confidence 568999999998899 89999999963 357899997 56899988744 4 479
Q ss_pred CccEEEEECCEEEEEcCcCCCC-----CccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCC
Q 002713 101 AAHAAAAVGTMVVFQGGIGPAG-----HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGK 175 (889)
Q Consensus 101 ~~haa~~~~~~Iyv~GG~~~~~-----~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~ 175 (889)
..|++++++++||++||..... ..++++|+||+.+++ |+.+. ..+|.+|.+|+++...+++||++||.+..
T Consensus 55 ~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~--W~~~~--~~~p~~~~~~~~~~~~~g~IYviGG~~~~ 130 (346)
T TIGR03547 55 NQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNS--WQKLD--TRSPVGLLGASGFSLHNGQAYFTGGVNKN 130 (346)
T ss_pred ccceEEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCCE--EecCC--CCCCCcccceeEEEEeCCEEEEEcCcChH
Confidence 9999999999999999985322 246899999999955 99984 24677788888874455699999998642
Q ss_pred c----------------------------------ccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEE
Q 002713 176 R----------------------------------VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLL 221 (889)
Q Consensus 176 ~----------------------------------~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v 221 (889)
. .++++++||+.++ +|+.++++ |.+++.+++++..+++|||
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~t~--~W~~~~~~---p~~~r~~~~~~~~~~~iyv 205 (346)
T TIGR03547 131 IFDGYFADLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPSTN--QWRNLGEN---PFLGTAGSAIVHKGNKLLL 205 (346)
T ss_pred HHHHHHhhHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEECCCC--ceeECccC---CCCcCCCceEEEECCEEEE
Confidence 1 2478999999999 99999765 5433344555567889999
Q ss_pred EccCCCCCCcccceEEEecccCCeeEEEeCCCCCCCcc-------ceeEEEEECCEEEEEcCCCCCCCC-----------
Q 002713 222 CGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPR-------YQHAAVFVGARLHVTGGALRGGRA----------- 283 (889)
Q Consensus 222 ~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R-------~~hs~~~~~~~lyV~GG~~~~~~~----------- 283 (889)
+||....+....+++.|+...+ ..+|...+.+ |.+| .+|++++++++|||+||.......
T Consensus 206 ~GG~~~~~~~~~~~~~y~~~~~-~~~W~~~~~m-~~~r~~~~~~~~~~~a~~~~~~Iyv~GG~~~~~~~~~~~~~~~~~~ 283 (346)
T TIGR03547 206 INGEIKPGLRTAEVKQYLFTGG-KLEWNKLPPL-PPPKSSSQEGLAGAFAGISNGVLLVAGGANFPGAQENYKNGKLYAH 283 (346)
T ss_pred EeeeeCCCccchheEEEEecCC-CceeeecCCC-CCCCCCccccccEEeeeEECCEEEEeecCCCCCchhhhhcCCcccc
Confidence 9998655433456666664211 2367777665 3443 567788899999999998532210
Q ss_pred --ccCCCcEEEEECCCCeEEeccCCccccCCCCCCCCCCCccCcccccceEEEEECCEEEEEcCCCCCCCcccccccEEE
Q 002713 284 --IEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFLV 361 (889)
Q Consensus 284 --~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~~~~~~~~~~d~~~ 361 (889)
......+++||+++++|+.+..++. +|..+++++++++|||+||.+.. +..++|++.
T Consensus 284 ~~~~~~~~~e~yd~~~~~W~~~~~lp~------------------~~~~~~~~~~~~~iyv~GG~~~~---~~~~~~v~~ 342 (346)
T TIGR03547 284 EGLIKAWSSEVYALDNGKWSKVGKLPQ------------------GLAYGVSVSWNNGVLLIGGENSG---GKAVTDVYL 342 (346)
T ss_pred CCCCceeEeeEEEecCCcccccCCCCC------------------CceeeEEEEcCCEEEEEeccCCC---CCEeeeEEE
Confidence 0112468999999999999988844 88888888999999999998652 456777765
Q ss_pred c
Q 002713 362 A 362 (889)
Q Consensus 362 l 362 (889)
+
T Consensus 343 ~ 343 (346)
T TIGR03547 343 L 343 (346)
T ss_pred E
Confidence 4
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=273.94 Aligned_cols=227 Identities=24% Similarity=0.407 Sum_probs=203.1
Q ss_pred CCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccCccEE
Q 002713 26 APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAA 105 (889)
Q Consensus 26 ~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa 105 (889)
.|..|+||+.+.+ .+++||+||...+.+ .-|.+|+||+++++|.+....|..|.+|.+|++
T Consensus 75 VPyqRYGHtvV~y------~d~~yvWGGRND~eg-------------aCN~Ly~fDp~t~~W~~p~v~G~vPgaRDGHsA 135 (392)
T KOG4693|consen 75 VPYQRYGHTVVEY------QDKAYVWGGRNDDEG-------------ACNLLYEFDPETNVWKKPEVEGFVPGARDGHSA 135 (392)
T ss_pred cchhhcCceEEEE------cceEEEEcCccCccc-------------ccceeeeeccccccccccceeeecCCccCCcee
Confidence 5778999999999 999999999976554 589999999999999999999999999999999
Q ss_pred EEECCEEEEEcCcC-CCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCC---------
Q 002713 106 AAVGTMVVFQGGIG-PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGK--------- 175 (889)
Q Consensus 106 ~~~~~~Iyv~GG~~-~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~--------- 175 (889)
|++++.+|||||+. .....++|++.+|+++ ++|+.+.+.|.+|.-|..|++++++. .+|||||+...
T Consensus 136 cV~gn~MyiFGGye~~a~~FS~d~h~ld~~T--mtWr~~~Tkg~PprwRDFH~a~~~~~-~MYiFGGR~D~~gpfHs~~e 212 (392)
T KOG4693|consen 136 CVWGNQMYIFGGYEEDAQRFSQDTHVLDFAT--MTWREMHTKGDPPRWRDFHTASVIDG-MMYIFGGRSDESGPFHSIHE 212 (392)
T ss_pred eEECcEEEEecChHHHHHhhhccceeEeccc--eeeeehhccCCCchhhhhhhhhhccc-eEEEeccccccCCCccchhh
Confidence 99999999999986 3456789999999999 77999999999999999999999995 99999998532
Q ss_pred cccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCC-CCcccceEEEecccCCeeEEEeCCCC
Q 002713 176 RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS-GAPLADAYGLLMHRNGQWEWTLAPGV 254 (889)
Q Consensus 176 ~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~-~~~~~dv~~l~~~~~~~W~w~~~~~~ 254 (889)
.+.+.+..+|+.|. .|...++..-.|..|+.|++.+ .|++||+|||++.. +..++|+|+||+.+. .|..+...+.
T Consensus 213 ~Yc~~i~~ld~~T~--aW~r~p~~~~~P~GRRSHS~fv-Yng~~Y~FGGYng~ln~HfndLy~FdP~t~-~W~~I~~~Gk 288 (392)
T KOG4693|consen 213 QYCDTIMALDLATG--AWTRTPENTMKPGGRRSHSTFV-YNGKMYMFGGYNGTLNVHFNDLYCFDPKTS-MWSVISVRGK 288 (392)
T ss_pred hhcceeEEEecccc--ccccCCCCCcCCCcccccceEE-EcceEEEecccchhhhhhhcceeecccccc-hheeeeccCC
Confidence 34678888999999 9999988888899999999986 56699999999765 356899999999866 8888888899
Q ss_pred CCCccceeEEEEECCEEEEEcCCC
Q 002713 255 APSPRYQHAAVFVGARLHVTGGAL 278 (889)
Q Consensus 255 ~p~~R~~hs~~~~~~~lyV~GG~~ 278 (889)
.|.+|..+++++.++++|+|||..
T Consensus 289 ~P~aRRRqC~~v~g~kv~LFGGTs 312 (392)
T KOG4693|consen 289 YPSARRRQCSVVSGGKVYLFGGTS 312 (392)
T ss_pred CCCcccceeEEEECCEEEEecCCC
Confidence 999999999999999999999975
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-31 Score=312.14 Aligned_cols=250 Identities=13% Similarity=0.140 Sum_probs=212.4
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCc
Q 002713 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (889)
Q Consensus 74 ~ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R 153 (889)
...+++||+.+++|..+++ +|.+|..|++++++++||++||........+++|+||+.+++ |..+ .++|.+|
T Consensus 271 ~~~v~~yd~~~~~W~~l~~---mp~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~--W~~~---~~m~~~R 342 (557)
T PHA02713 271 NPCILVYNINTMEYSVIST---IPNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENKI--HVEL---PPMIKNR 342 (557)
T ss_pred CCCEEEEeCCCCeEEECCC---CCccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCCe--EeeC---CCCcchh
Confidence 3578999999999998874 558899999999999999999975444567899999999955 9888 7899999
Q ss_pred cccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCC----
Q 002713 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASG---- 229 (889)
Q Consensus 154 ~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~---- 229 (889)
.+|+++++++ +||++||.++...++++++||+.++ +|+.++++ |.+|..+++++ .+++||++||.+...
T Consensus 343 ~~~~~~~~~g-~IYviGG~~~~~~~~sve~Ydp~~~--~W~~~~~m---p~~r~~~~~~~-~~g~IYviGG~~~~~~~~~ 415 (557)
T PHA02713 343 CRFSLAVIDD-TIYAIGGQNGTNVERTIECYTMGDD--KWKMLPDM---PIALSSYGMCV-LDQYIYIIGGRTEHIDYTS 415 (557)
T ss_pred hceeEEEECC-EEEEECCcCCCCCCceEEEEECCCC--eEEECCCC---CcccccccEEE-ECCEEEEEeCCCccccccc
Confidence 9999988886 9999999988778899999999999 99999876 77887776664 578999999986432
Q ss_pred -------------CcccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECC
Q 002713 230 -------------APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTA 296 (889)
Q Consensus 230 -------------~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~ 296 (889)
..++.+++||+.++ +|..++.+ +.+|..+++++++++|||+||..+... ..+.+++||++
T Consensus 416 ~~~~~~~~~~~~~~~~~~ve~YDP~td---~W~~v~~m-~~~r~~~~~~~~~~~IYv~GG~~~~~~---~~~~ve~Ydp~ 488 (557)
T PHA02713 416 VHHMNSIDMEEDTHSSNKVIRYDTVNN---IWETLPNF-WTGTIRPGVVSHKDDIYVVCDIKDEKN---VKTCIFRYNTN 488 (557)
T ss_pred ccccccccccccccccceEEEECCCCC---eEeecCCC-CcccccCcEEEECCEEEEEeCCCCCCc---cceeEEEecCC
Confidence 12578999999988 78888766 789999999999999999999764321 13568999999
Q ss_pred C-CeEEeccCCccccCCCCCCCCCCCccCcccccceEEEEECCEEEEEcCCCC---CCCcccccccEEEcc
Q 002713 297 A-GVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG---AFCADILLDDFLVAE 363 (889)
Q Consensus 297 t-~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~---~~~~~~~~~d~~~l~ 363 (889)
+ ++|+.++.++. +|..+++++++++||++||+++ +++|++..+.|..+-
T Consensus 489 ~~~~W~~~~~m~~------------------~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~ 541 (557)
T PHA02713 489 TYNGWELITTTES------------------RLSALHTILHDNTIMMLHCYESYMLQDTFNVYTYEWNHIC 541 (557)
T ss_pred CCCCeeEccccCc------------------ccccceeEEECCEEEEEeeecceeehhhcCcccccccchh
Confidence 9 89999998844 9999999999999999999888 678888888888654
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=314.32 Aligned_cols=251 Identities=12% Similarity=0.125 Sum_probs=210.8
Q ss_pred CCCcccccceeecCCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEE
Q 002713 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTR 89 (889)
Q Consensus 10 ~~~yd~~~~~w~~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~ 89 (889)
..+||+.+++|...+++|.+|.+|+++++ +++|||+||...... ..+++++||+.+++|..
T Consensus 274 v~~yd~~~~~W~~l~~mp~~r~~~~~a~l------~~~IYviGG~~~~~~-------------~~~~v~~Yd~~~n~W~~ 334 (557)
T PHA02713 274 ILVYNINTMEYSVISTIPNHIINYASAIV------DNEIIIAGGYNFNNP-------------SLNKVYKINIENKIHVE 334 (557)
T ss_pred EEEEeCCCCeEEECCCCCccccceEEEEE------CCEEEEEcCCCCCCC-------------ccceEEEEECCCCeEee
Confidence 45799999999999999999999999999 899999999752211 37899999999999998
Q ss_pred ecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEE
Q 002713 90 IRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSV 169 (889)
Q Consensus 90 l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~ 169 (889)
+++ +|.+|..|++++++++||++||.. +....+++++||+.+++ |..+ .++|.+|.+|+++++++ +||++
T Consensus 335 ~~~---m~~~R~~~~~~~~~g~IYviGG~~-~~~~~~sve~Ydp~~~~--W~~~---~~mp~~r~~~~~~~~~g-~IYvi 404 (557)
T PHA02713 335 LPP---MIKNRCRFSLAVIDDTIYAIGGQN-GTNVERTIECYTMGDDK--WKML---PDMPIALSSYGMCVLDQ-YIYII 404 (557)
T ss_pred CCC---CcchhhceeEEEECCEEEEECCcC-CCCCCceEEEEECCCCe--EEEC---CCCCcccccccEEEECC-EEEEE
Confidence 874 458999999999999999999975 33457889999999965 9988 78999999999988875 99999
Q ss_pred ecCCCC------------------cccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCc
Q 002713 170 SGNDGK------------------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (889)
Q Consensus 170 GG~~~~------------------~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~ 231 (889)
||.++. ..++.+++||+.++ +|+.++++ |.+|..++++ ..+++||++||.+.....
T Consensus 405 GG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td--~W~~v~~m---~~~r~~~~~~-~~~~~IYv~GG~~~~~~~ 478 (557)
T PHA02713 405 GGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNN--IWETLPNF---WTGTIRPGVV-SHKDDIYVVCDIKDEKNV 478 (557)
T ss_pred eCCCcccccccccccccccccccccccceEEEECCCCC--eEeecCCC---CcccccCcEE-EECCEEEEEeCCCCCCcc
Confidence 998642 13688999999999 99999876 6777666555 567799999998654333
Q ss_pred ccceEEEeccc-CCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEeccCC
Q 002713 232 LADAYGLLMHR-NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (889)
Q Consensus 232 ~~dv~~l~~~~-~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~ 306 (889)
.+.+++||+.+ + +|...+.+ |.+|..+++++++++||++||+.+ ..++++||+.|++|+.+.+.
T Consensus 479 ~~~ve~Ydp~~~~---~W~~~~~m-~~~r~~~~~~~~~~~iyv~Gg~~~-------~~~~e~yd~~~~~W~~~~~~ 543 (557)
T PHA02713 479 KTCIFRYNTNTYN---GWELITTT-ESRLSALHTILHDNTIMMLHCYES-------YMLQDTFNVYTYEWNHICHQ 543 (557)
T ss_pred ceeEEEecCCCCC---CeeEcccc-CcccccceeEEECCEEEEEeeecc-------eeehhhcCcccccccchhhh
Confidence 44578999997 6 67777665 799999999999999999999864 23699999999999988865
|
|
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-31 Score=305.25 Aligned_cols=294 Identities=29% Similarity=0.472 Sum_probs=242.2
Q ss_pred CCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCC-cEEEEECCCCcEEEecCCCCCCcccC
Q 002713 23 DEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTN-SVHLYDVLTRKWTRIRPAGEPPSPRA 101 (889)
Q Consensus 23 ~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~n-dv~~yD~~t~~W~~l~~~g~~P~~R~ 101 (889)
....|.+|++|+++.+ ++++|||||...... .++ |+|+||..+..|.+....+..|.+|+
T Consensus 54 ~~~~p~~R~~hs~~~~------~~~~~vfGG~~~~~~-------------~~~~dl~~~d~~~~~w~~~~~~g~~p~~r~ 114 (482)
T KOG0379|consen 54 LGVGPIPRAGHSAVLI------GNKLYVFGGYGSGDR-------------LTDLDLYVLDLESQLWTKPAATGDEPSPRY 114 (482)
T ss_pred CCCCcchhhccceeEE------CCEEEEECCCCCCCc-------------cccceeEEeecCCcccccccccCCCCCccc
Confidence 3567899999999999 899999999986543 122 69999999999999999999999999
Q ss_pred ccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCc-ccCc
Q 002713 102 AHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR-VLSD 180 (889)
Q Consensus 102 ~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~-~lnd 180 (889)
+|++++++++||+|||.......+++++.||+.+.+ |..+.+.+.+|.+|.+|+++++++ ++|||||.+... .+|+
T Consensus 115 g~~~~~~~~~l~lfGG~~~~~~~~~~l~~~d~~t~~--W~~l~~~~~~P~~r~~Hs~~~~g~-~l~vfGG~~~~~~~~nd 191 (482)
T KOG0379|consen 115 GHSLSAVGDKLYLFGGTDKKYRNLNELHSLDLSTRT--WSLLSPTGDPPPPRAGHSATVVGT-KLVVFGGIGGTGDSLND 191 (482)
T ss_pred ceeEEEECCeEEEEccccCCCCChhheEeccCCCCc--EEEecCcCCCCCCcccceEEEECC-EEEEECCccCcccceee
Confidence 999999999999999987656678999999999955 999999999999999999999995 999999998877 8999
Q ss_pred EEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeEEEeCC--CCCCCc
Q 002713 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAP--GVAPSP 258 (889)
Q Consensus 181 v~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~--~~~p~~ 258 (889)
+|+||+++. +|.++...+..|.||.+|+++++.+ +++|+||.......++|+|.||+.+ |+|.... +..|.+
T Consensus 192 l~i~d~~~~--~W~~~~~~g~~P~pR~gH~~~~~~~-~~~v~gG~~~~~~~l~D~~~ldl~~---~~W~~~~~~g~~p~~ 265 (482)
T KOG0379|consen 192 LHIYDLETS--TWSELDTQGEAPSPRYGHAMVVVGN-KLLVFGGGDDGDVYLNDVHILDLST---WEWKLLPTGGDLPSP 265 (482)
T ss_pred eeeeccccc--cceecccCCCCCCCCCCceEEEECC-eEEEEeccccCCceecceEeeeccc---ceeeeccccCCCCCC
Confidence 999999999 8999999999999999999887666 5566666555566799999999986 6777554 778999
Q ss_pred cceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEeccCCccccCCCCCCCCCCCccCcccccceEEEEECC
Q 002713 259 RYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGV 338 (889)
Q Consensus 259 R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v~~ 338 (889)
|+.|+.+..+.+++++||..... ...+.++|.||+++..|..+..... ..|.+|..|+.+.+..
T Consensus 266 R~~h~~~~~~~~~~l~gG~~~~~--~~~l~~~~~l~~~~~~w~~~~~~~~--------------~~~~~~~~~~~~~~~~ 329 (482)
T KOG0379|consen 266 RSGHSLTVSGDHLLLFGGGTDPK--QEPLGDLYGLDLETLVWSKVESVGV--------------VRPSPRLGHAAELIDE 329 (482)
T ss_pred cceeeeEEECCEEEEEcCCcccc--cccccccccccccccceeeeecccc--------------ccccccccccceeecc
Confidence 99999999999999999976541 1237899999999999999988751 1144888888887755
Q ss_pred E----EEEEcCCCCCCCcccccccEEEcc
Q 002713 339 R----IYIYGGLKGAFCADILLDDFLVAE 363 (889)
Q Consensus 339 ~----lyv~GG~~~~~~~~~~~~d~~~l~ 363 (889)
. +.++||... .....+++..+.
T Consensus 330 ~~~~~~~~~~~~~~---~~~~~~~~~~~~ 355 (482)
T KOG0379|consen 330 LGKDGLGILGGNQI---LGERLADVFSLQ 355 (482)
T ss_pred CCccceeeecCccc---cccchhhccccc
Confidence 4 444444222 234444554443
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-30 Score=293.89 Aligned_cols=287 Identities=18% Similarity=0.224 Sum_probs=214.3
Q ss_pred ceeecCCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECC--CCcEEEecCCCC
Q 002713 18 TYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVL--TRKWTRIRPAGE 95 (889)
Q Consensus 18 ~~w~~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~--t~~W~~l~~~g~ 95 (889)
-.++..+++|.||..++++++ +++|||+||.. .+.+|+||+. +++|.+++.+..
T Consensus 17 ~~~~~l~~lP~~~~~~~~~~~------~~~iyv~gG~~------------------~~~~~~~d~~~~~~~W~~l~~~p~ 72 (376)
T PRK14131 17 ANAEQLPDLPVPFKNGTGAID------NNTVYVGLGSA------------------GTSWYKLDLNAPSKGWTKIAAFPG 72 (376)
T ss_pred eecccCCCCCcCccCCeEEEE------CCEEEEEeCCC------------------CCeEEEEECCCCCCCeEECCcCCC
Confidence 346778899999998999888 89999999963 2458999987 478998874421
Q ss_pred CCcccCccEEEEECCEEEEEcCcCCC-----CCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEe
Q 002713 96 PPSPRAAHAAAAVGTMVVFQGGIGPA-----GHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVS 170 (889)
Q Consensus 96 ~P~~R~~haa~~~~~~Iyv~GG~~~~-----~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~G 170 (889)
.+|.+|++++++++||++||.... ...++++|+||+.+++ |+.+.. ..|.+|.+|+++++.+++||++|
T Consensus 73 --~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~--W~~~~~--~~p~~~~~~~~~~~~~~~IYv~G 146 (376)
T PRK14131 73 --GPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNS--WQKLDT--RSPVGLAGHVAVSLHNGKAYITG 146 (376)
T ss_pred --CCcccceEEEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCE--EEeCCC--CCCCcccceEEEEeeCCEEEEEC
Confidence 479999999999999999998641 1346899999999955 999842 35777888888775556999999
Q ss_pred cCCCC----------------------------------cccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecC
Q 002713 171 GNDGK----------------------------------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSD 216 (889)
Q Consensus 171 G~~~~----------------------------------~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~ 216 (889)
|.+.. ...+++++||+.++ +|+.+.++ |.+++.+++++..+
T Consensus 147 G~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~~t~--~W~~~~~~---p~~~~~~~a~v~~~ 221 (376)
T PRK14131 147 GVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDPSTN--QWKNAGES---PFLGTAGSAVVIKG 221 (376)
T ss_pred CCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEECCCC--eeeECCcC---CCCCCCcceEEEEC
Confidence 97632 12578999999999 99998754 54334455566678
Q ss_pred CEEEEEccCCCCCCcccceEEEec--ccCCeeEEEeCCCCCCCccc--------eeEEEEECCEEEEEcCCCCCCCC---
Q 002713 217 GMFLLCGGRDASGAPLADAYGLLM--HRNGQWEWTLAPGVAPSPRY--------QHAAVFVGARLHVTGGALRGGRA--- 283 (889)
Q Consensus 217 ~~l~v~GG~~~~~~~~~dv~~l~~--~~~~~W~w~~~~~~~p~~R~--------~hs~~~~~~~lyV~GG~~~~~~~--- 283 (889)
++|||+||....+....++|.++. .+. +|...+.+ |.+|. ++.+++++++|||+||.......
T Consensus 222 ~~iYv~GG~~~~~~~~~~~~~~~~~~~~~---~W~~~~~~-p~~~~~~~~~~~~~~~a~~~~~~iyv~GG~~~~~~~~~~ 297 (376)
T PRK14131 222 NKLWLINGEIKPGLRTDAVKQGKFTGNNL---KWQKLPDL-PPAPGGSSQEGVAGAFAGYSNGVLLVAGGANFPGARENY 297 (376)
T ss_pred CEEEEEeeeECCCcCChhheEEEecCCCc---ceeecCCC-CCCCcCCcCCccceEeceeECCEEEEeeccCCCCChhhh
Confidence 899999998655544566776654 333 67777655 44442 33467789999999997642210
Q ss_pred ----------ccCCCcEEEEECCCCeEEeccCCccccCCCCCCCCCCCccCcccccceEEEEECCEEEEEcCCCCCCCcc
Q 002713 284 ----------IEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCAD 353 (889)
Q Consensus 284 ----------~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~~~~~~ 353 (889)
......+++||+++++|+.+..++. +|..+++++++++|||+||.... .
T Consensus 298 ~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~lp~------------------~r~~~~av~~~~~iyv~GG~~~~---~ 356 (376)
T PRK14131 298 QNGKLYAHEGLKKSWSDEIYALVNGKWQKVGELPQ------------------GLAYGVSVSWNNGVLLIGGETAG---G 356 (376)
T ss_pred hcCCcccccCCcceeehheEEecCCcccccCcCCC------------------CccceEEEEeCCEEEEEcCCCCC---C
Confidence 0112357899999999999887744 88899999999999999997542 3
Q ss_pred cccccEEEccC
Q 002713 354 ILLDDFLVAEN 364 (889)
Q Consensus 354 ~~~~d~~~l~~ 364 (889)
..++|++.++.
T Consensus 357 ~~~~~v~~~~~ 367 (376)
T PRK14131 357 KAVSDVTLLSW 367 (376)
T ss_pred cEeeeEEEEEE
Confidence 56778876653
|
|
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-31 Score=281.20 Aligned_cols=262 Identities=27% Similarity=0.466 Sum_probs=216.4
Q ss_pred CCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccCcc
Q 002713 24 EDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAH 103 (889)
Q Consensus 24 ~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~~h 103 (889)
-++|.||.+.++++.+. .+.|++|||...+.... .+.||+|+||..+++|+++... ..|+||++|
T Consensus 61 ~~~PspRsn~sl~~nPe----keELilfGGEf~ngqkT----------~vYndLy~Yn~k~~eWkk~~sp-n~P~pRssh 125 (521)
T KOG1230|consen 61 VPPPSPRSNPSLFANPE----KEELILFGGEFYNGQKT----------HVYNDLYSYNTKKNEWKKVVSP-NAPPPRSSH 125 (521)
T ss_pred CCCCCCCCCcceeeccC----cceeEEecceeecceeE----------EEeeeeeEEeccccceeEeccC-CCcCCCccc
Confidence 35789999999999865 66999999986543321 2689999999999999999744 578899999
Q ss_pred EEEEEC-CEEEEEcCcC--CCC---CccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCC---
Q 002713 104 AAAAVG-TMVVFQGGIG--PAG---HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDG--- 174 (889)
Q Consensus 104 aa~~~~-~~Iyv~GG~~--~~~---~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~--- 174 (889)
.++++. +.+++|||.- +.+ ....|+|+||+.+.+ |+++...| .|.+|.+|-|+++.. .|++|||...
T Consensus 126 q~va~~s~~l~~fGGEfaSPnq~qF~HYkD~W~fd~~trk--weql~~~g-~PS~RSGHRMvawK~-~lilFGGFhd~nr 201 (521)
T KOG1230|consen 126 QAVAVPSNILWLFGGEFASPNQEQFHHYKDLWLFDLKTRK--WEQLEFGG-GPSPRSGHRMVAWKR-QLILFGGFHDSNR 201 (521)
T ss_pred eeEEeccCeEEEeccccCCcchhhhhhhhheeeeeeccch--heeeccCC-CCCCCccceeEEeee-eEEEEcceecCCC
Confidence 999996 7999999953 222 346899999999955 99997744 899999999999997 8999999743
Q ss_pred -CcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCC--------CCcccceEEEeccc--C
Q 002713 175 -KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS--------GAPLADAYGLLMHR--N 243 (889)
Q Consensus 175 -~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~--------~~~~~dv~~l~~~~--~ 243 (889)
..++||||+||+.+- +|+++.+.+.-|.||.++.+.+...+.|||.||++.. |...+|+|.|++.. .
T Consensus 202 ~y~YyNDvy~FdLdty--kW~Klepsga~PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~~ 279 (521)
T KOG1230|consen 202 DYIYYNDVYAFDLDTY--KWSKLEPSGAGPTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGRE 279 (521)
T ss_pred ceEEeeeeEEEeccce--eeeeccCCCCCCCCCCcceEEecCCCcEEEEcchhHhhhhhhhhcCceeeeeeeecCCcCCC
Confidence 356999999999986 9999999888899999999999888899999998543 56789999999875 4
Q ss_pred CeeEEEeCC--CCCCCccceeEEEEE-CCEEEEEcCCCCC-----CCCccCCCcEEEEECCCCeEEeccCC
Q 002713 244 GQWEWTLAP--GVAPSPRYQHAAVFV-GARLHVTGGALRG-----GRAIEGEAAVAVLDTAAGVWLDRNGL 306 (889)
Q Consensus 244 ~~W~w~~~~--~~~p~~R~~hs~~~~-~~~lyV~GG~~~~-----~~~~~~~~~v~~yD~~t~~W~~v~~~ 306 (889)
..|.|..+. ++.|.||.++++++. +++-+.|||...- .-...+.++++.||++.++|.+....
T Consensus 280 dKw~W~kvkp~g~kPspRsgfsv~va~n~kal~FGGV~D~eeeeEsl~g~F~NDLy~fdlt~nrW~~~qlq 350 (521)
T KOG1230|consen 280 DKWVWTKVKPSGVKPSPRSGFSVAVAKNHKALFFGGVCDLEEEEESLSGEFFNDLYFFDLTRNRWSEGQLQ 350 (521)
T ss_pred cceeEeeccCCCCCCCCCCceeEEEecCCceEEecceecccccchhhhhhhhhhhhheecccchhhHhhhc
Confidence 589998875 788999999999998 5699999998641 11223478999999999999876443
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=279.84 Aligned_cols=218 Identities=49% Similarity=0.779 Sum_probs=175.9
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhh
Q 002713 588 KVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINAL 667 (889)
Q Consensus 588 ~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ 667 (889)
+|||||||++.+|.++|+..+..+.+ .+||||||||||+++.||+.+|+.++.. |.++++||||||.+.++..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d------~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~ 73 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFL 73 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCC------EEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhh
Confidence 58999999999999999999986655 8999999999999999999999999887 8899999999999998887
Q ss_pred cCChHHHH-----HHhCCCCchhhhhhhhhhcCCCceEEEEcC-eEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhh
Q 002713 668 FGFRLECI-----ERMGENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILM 741 (889)
Q Consensus 668 ~gf~~e~~-----~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~ 741 (889)
+++..+.. ..........++..+.++|..||+++.++. +++|||||+.|.....+++. ..+ ..+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~-~~~~~~ 146 (225)
T cd00144 74 YGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEP-EDQLPE 146 (225)
T ss_pred cCCcchhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCc-ccccce
Confidence 77664421 011111234577888899999999999986 89999999999876555544 111 123678
Q ss_pred ccccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCe
Q 002713 742 DLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNA 821 (889)
Q Consensus 742 dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ 821 (889)
+++|++|.... .....+.|+. |+++.+.|++.++.++|||||+++..|+.....+++|||+|++.|++..+|.
T Consensus 147 ~~lw~r~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~ 219 (225)
T cd00144 147 DLLWSDPLELP--GGFGSSRRGG-----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNK 219 (225)
T ss_pred eeeecCCCCCC--CCCcCCCCCC-----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCcc
Confidence 99999997532 2223334443 8999999999999999999999999998767789999999999999877777
Q ss_pred EEEEE
Q 002713 822 GAILV 826 (889)
Q Consensus 822 ga~l~ 826 (889)
.+++.
T Consensus 220 l~~~~ 224 (225)
T cd00144 220 LAALV 224 (225)
T ss_pred EEEEe
Confidence 77664
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=284.68 Aligned_cols=275 Identities=16% Similarity=0.205 Sum_probs=205.1
Q ss_pred CCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCC--CcEEEecCCCCCCcccCccEE
Q 002713 28 GPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLT--RKWTRIRPAGEPPSPRAAHAA 105 (889)
Q Consensus 28 ~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t--~~W~~l~~~g~~P~~R~~haa 105 (889)
..+.||.++++ +++|||+||....... .... +.....+++|+|+... .+|..+. .+|.+|..|++
T Consensus 2 ~~~~g~~~~~~------~~~l~v~GG~~~~~~~--~~~~--g~~~~~~~v~~~~~~~~~~~W~~~~---~lp~~r~~~~~ 68 (323)
T TIGR03548 2 LGVAGCYAGII------GDYILVAGGCNFPEDP--LAEG--GKKKNYKGIYIAKDENSNLKWVKDG---QLPYEAAYGAS 68 (323)
T ss_pred CceeeEeeeEE------CCEEEEeeccCCCCCc--hhhC--CcEEeeeeeEEEecCCCceeEEEcc---cCCccccceEE
Confidence 35778999999 8999999998654210 0000 1122578999996332 3798776 55689998999
Q ss_pred EEECCEEEEEcCcCCCCCccCcEEEEEccCCce--EEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCcccCcEEE
Q 002713 106 AAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKF--KWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWA 183 (889)
Q Consensus 106 ~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~--~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~ 183 (889)
++++++||++||... ...++++|+||+.++++ .|..+ +++|.+|..|+++++++ +||++||......++++|+
T Consensus 69 ~~~~~~lyviGG~~~-~~~~~~v~~~d~~~~~w~~~~~~~---~~lp~~~~~~~~~~~~~-~iYv~GG~~~~~~~~~v~~ 143 (323)
T TIGR03548 69 VSVENGIYYIGGSNS-SERFSSVYRITLDESKEELICETI---GNLPFTFENGSACYKDG-TLYVGGGNRNGKPSNKSYL 143 (323)
T ss_pred EEECCEEEEEcCCCC-CCCceeEEEEEEcCCceeeeeeEc---CCCCcCccCceEEEECC-EEEEEeCcCCCccCceEEE
Confidence 999999999999853 44678999999998663 23444 78999999999988876 8999999876667899999
Q ss_pred EecCCCCceEEEccCCCCCC-CcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeEEEeCCCC----CCCc
Q 002713 184 LDTAQKPYVWQRLNPEGDRP-SARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGV----APSP 258 (889)
Q Consensus 184 yd~~t~~~~W~~v~~~~~~P-~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~~~----~p~~ 258 (889)
||+.++ +|++++++ | .+|..|++ +..+++|||+||.+.. ...|+++||+.++ +|..++.+ .|..
T Consensus 144 yd~~~~--~W~~~~~~---p~~~r~~~~~-~~~~~~iYv~GG~~~~--~~~~~~~yd~~~~---~W~~~~~~~~~~~p~~ 212 (323)
T TIGR03548 144 FNLETQ--EWFELPDF---PGEPRVQPVC-VKLQNELYVFGGGSNI--AYTDGYKYSPKKN---QWQKVADPTTDSEPIS 212 (323)
T ss_pred EcCCCC--CeeECCCC---CCCCCCcceE-EEECCEEEEEcCCCCc--cccceEEEecCCC---eeEECCCCCCCCCcee
Confidence 999999 99999765 3 35655544 4567899999998643 3568899999877 56666543 2344
Q ss_pred cceeEEEE-ECCEEEEEcCCCCCCC----------------------------CccCCCcEEEEECCCCeEEeccCCccc
Q 002713 259 RYQHAAVF-VGARLHVTGGALRGGR----------------------------AIEGEAAVAVLDTAAGVWLDRNGLVTS 309 (889)
Q Consensus 259 R~~hs~~~-~~~~lyV~GG~~~~~~----------------------------~~~~~~~v~~yD~~t~~W~~v~~~~~~ 309 (889)
+..++++. .+++|||+||...... .....+++++||+.+++|+.+..++.
T Consensus 213 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~- 291 (323)
T TIGR03548 213 LLGAASIKINESLLLCIGGFNKDVYNDAVIDLATMKDESLKGYKKEYFLKPPEWYNWNRKILIYNVRTGKWKSIGNSPF- 291 (323)
T ss_pred ccceeEEEECCCEEEEECCcCHHHHHHHHhhhhhccchhhhhhHHHHhCCCccccCcCceEEEEECCCCeeeEcccccc-
Confidence 44555444 4799999999863210 01123679999999999999986632
Q ss_pred cCCCCCCCCCCCccCcccccceEEEEECCEEEEEcCCCC
Q 002713 310 SRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348 (889)
Q Consensus 310 ~~~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~ 348 (889)
.+|..+++++++++||++||...
T Consensus 292 ----------------~~r~~~~~~~~~~~iyv~GG~~~ 314 (323)
T TIGR03548 292 ----------------FARCGAALLLTGNNIFSINGELK 314 (323)
T ss_pred ----------------cccCchheEEECCEEEEEecccc
Confidence 28999999999999999999644
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-29 Score=279.19 Aligned_cols=261 Identities=24% Similarity=0.378 Sum_probs=199.2
Q ss_pred CCCcEEEecCC-CCCCcccCccEEEEECCEEEEEcCcCCC-CCccCcEEEEEccCCceEEEEEeecCCCCC-CccccEEE
Q 002713 83 LTRKWTRIRPA-GEPPSPRAAHAAAAVGTMVVFQGGIGPA-GHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-PRYGHVMD 159 (889)
Q Consensus 83 ~t~~W~~l~~~-g~~P~~R~~haa~~~~~~Iyv~GG~~~~-~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~-~R~~hs~~ 159 (889)
...+|.++... +..|.||.+|++++++++|||+||.... ....+++|+||+.+++ |..+.+.+..|. .+.+|+++
T Consensus 5 ~~~~W~~~~~~~~~~P~pR~~h~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~p~~~~~~~~~~ 82 (341)
T PLN02153 5 LQGGWIKVEQKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHT--WSIAPANGDVPRISCLGVRMV 82 (341)
T ss_pred cCCeEEEecCCCCCCCCCCCcceEEEECCEEEEECCccCCCCceeCcEEEEECCCCE--EEEcCccCCCCCCccCceEEE
Confidence 45679999764 3478999999999999999999998532 3346899999999955 998865544444 34578888
Q ss_pred EECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCC--CCCCcccceEEEEecCCEEEEEccCCCCC-----Ccc
Q 002713 160 LVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEG--DRPSARMYATASARSDGMFLLCGGRDASG-----APL 232 (889)
Q Consensus 160 ~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~--~~P~~r~~~~a~~~~~~~l~v~GG~~~~~-----~~~ 232 (889)
++++ +||+|||.+....++++++||+.++ +|+.++.+. ..|.+|..|++++ .+++|||+||.+..+ ..+
T Consensus 83 ~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~p~~R~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~ 158 (341)
T PLN02153 83 AVGT-KLYIFGGRDEKREFSDFYSYDTVKN--EWTFLTKLDEEGGPEARTFHSMAS-DENHVYVFGGVSKGGLMKTPERF 158 (341)
T ss_pred EECC-EEEEECCCCCCCccCcEEEEECCCC--EEEEeccCCCCCCCCCceeeEEEE-ECCEEEEECCccCCCccCCCccc
Confidence 8886 8999999988778899999999999 999987642 2377888777764 677899999986542 236
Q ss_pred cceEEEecccCCeeEEEeCCC--CCCCccceeEEEEECCEEEEEcCCCCC----CCCccCCCcEEEEECCCCeEEeccCC
Q 002713 233 ADAYGLLMHRNGQWEWTLAPG--VAPSPRYQHAAVFVGARLHVTGGALRG----GRAIEGEAAVAVLDTAAGVWLDRNGL 306 (889)
Q Consensus 233 ~dv~~l~~~~~~~W~w~~~~~--~~p~~R~~hs~~~~~~~lyV~GG~~~~----~~~~~~~~~v~~yD~~t~~W~~v~~~ 306 (889)
++++.|++.++ +|..++. ..|.+|.+|++++++++|||+||.... +......+++++||+++++|+++...
T Consensus 159 ~~v~~yd~~~~---~W~~l~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~ 235 (341)
T PLN02153 159 RTIEAYNIADG---KWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETT 235 (341)
T ss_pred ceEEEEECCCC---eEeeCCCCCCCCCCCCcceEEEECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEecccc
Confidence 78999999877 6666553 346899999999999999999997521 11112257899999999999998754
Q ss_pred ccccCCCCCCCCCCCccCcccccceEEEEECCEEEEEcCCCCCC-----CcccccccEEEccCCCC
Q 002713 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAF-----CADILLDDFLVAENSPF 367 (889)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~~~-----~~~~~~~d~~~l~~~~~ 367 (889)
.. .|.+|..|++++++++||||||..... ......+|++.++....
T Consensus 236 g~---------------~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~ 286 (341)
T PLN02153 236 GA---------------KPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL 286 (341)
T ss_pred CC---------------CCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence 22 145899999999999999999964211 11344567777775543
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=290.87 Aligned_cols=254 Identities=18% Similarity=0.203 Sum_probs=208.5
Q ss_pred CCcccccceeecCCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEe
Q 002713 11 PSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRI 90 (889)
Q Consensus 11 ~~yd~~~~~w~~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l 90 (889)
.+|++.+++|....+.|. +..|+++++ +++|||+||...... ..+++++||+.+++|..+
T Consensus 267 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~lyv~GG~~~~~~-------------~~~~v~~yd~~~~~W~~~ 326 (534)
T PHA03098 267 ITNYSPLSEINTIIDIHY-VYCFGSVVL------NNVIYFIGGMNKNNL-------------SVNSVVSYDTKTKSWNKV 326 (534)
T ss_pred eecchhhhhcccccCccc-cccceEEEE------CCEEEEECCCcCCCC-------------eeccEEEEeCCCCeeeEC
Confidence 357888889998876664 445788888 899999999864321 468999999999999987
Q ss_pred cCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEe
Q 002713 91 RPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVS 170 (889)
Q Consensus 91 ~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~G 170 (889)
+ .+|.+|.+|++++++++||++||.. .....+++++||+.+++ |+.+ .++|.+|++|+++++++ .+|++|
T Consensus 327 ~---~~~~~R~~~~~~~~~~~lyv~GG~~-~~~~~~~v~~yd~~~~~--W~~~---~~lp~~r~~~~~~~~~~-~iYv~G 396 (534)
T PHA03098 327 P---ELIYPRKNPGVTVFNNRIYVIGGIY-NSISLNTVESWKPGESK--WREE---PPLIFPRYNPCVVNVNN-LIYVIG 396 (534)
T ss_pred C---CCCcccccceEEEECCEEEEEeCCC-CCEecceEEEEcCCCCc--eeeC---CCcCcCCccceEEEECC-EEEEEC
Confidence 6 4558999999999999999999986 44567899999999955 9987 78899999999988876 899999
Q ss_pred cCCC-CcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCC--cccceEEEecccCCeeE
Q 002713 171 GNDG-KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA--PLADAYGLLMHRNGQWE 247 (889)
Q Consensus 171 G~~~-~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~--~~~dv~~l~~~~~~~W~ 247 (889)
|... ...++++++||+.++ +|+.++++ |.+|.+|++++ .+++||++||.+.... .+++++.||+.++ +
T Consensus 397 G~~~~~~~~~~v~~yd~~t~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~---~ 467 (534)
T PHA03098 397 GISKNDELLKTVECFSLNTN--KWSKGSPL---PISHYGGCAIY-HDGKIYVIGGISYIDNIKVYNIVESYNPVTN---K 467 (534)
T ss_pred CcCCCCcccceEEEEeCCCC--eeeecCCC---CccccCceEEE-ECCEEEEECCccCCCCCcccceEEEecCCCC---c
Confidence 9643 345799999999999 99998765 77887776654 5779999999865432 3667999999987 7
Q ss_pred EEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEeccCCcc
Q 002713 248 WTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVT 308 (889)
Q Consensus 248 w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~ 308 (889)
|...+.. |.+|..|+++.++++|||+||...... .+++++||+++++|+.+..+|.
T Consensus 468 W~~~~~~-~~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~p~ 523 (534)
T PHA03098 468 WTELSSL-NFPRINASLCIFNNKIYVVGGDKYEYY----INEIEVYDDKTNTWTLFCKFPK 523 (534)
T ss_pred eeeCCCC-CcccccceEEEECCEEEEEcCCcCCcc----cceeEEEeCCCCEEEecCCCcc
Confidence 7777655 688999999999999999999865432 5789999999999999887644
|
|
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-29 Score=262.80 Aligned_cols=219 Identities=31% Similarity=0.541 Sum_probs=185.5
Q ss_pred CCcccccceeec--CCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 002713 11 PSYRTLETYWDT--DEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (889)
Q Consensus 11 ~~yd~~~~~w~~--~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~ 88 (889)
-+|++..+.|.. .++.|.||++|++++++ .+.+|||||........ ++ ....|+|.||+.+++|+
T Consensus 101 y~Yn~k~~eWkk~~spn~P~pRsshq~va~~-----s~~l~~fGGEfaSPnq~-------qF-~HYkD~W~fd~~trkwe 167 (521)
T KOG1230|consen 101 YSYNTKKNEWKKVVSPNAPPPRSSHQAVAVP-----SNILWLFGGEFASPNQE-------QF-HHYKDLWLFDLKTRKWE 167 (521)
T ss_pred eEEeccccceeEeccCCCcCCCccceeEEec-----cCeEEEeccccCCcchh-------hh-hhhhheeeeeeccchhe
Confidence 468999999984 46789999999999995 35999999987533221 11 24689999999999999
Q ss_pred EecCCCCCCcccCccEEEEECCEEEEEcCcCC---CCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcE
Q 002713 89 RIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP---AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRY 165 (889)
Q Consensus 89 ~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~---~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~ 165 (889)
+|...| .|+||++|-++++..+|++|||.-+ ...++||||+||+++ ++|.++.+.|..|.+|.+|.+++..++.
T Consensus 168 ql~~~g-~PS~RSGHRMvawK~~lilFGGFhd~nr~y~YyNDvy~FdLdt--ykW~Klepsga~PtpRSGcq~~vtpqg~ 244 (521)
T KOG1230|consen 168 QLEFGG-GPSPRSGHRMVAWKRQLILFGGFHDSNRDYIYYNDVYAFDLDT--YKWSKLEPSGAGPTPRSGCQFSVTPQGG 244 (521)
T ss_pred eeccCC-CCCCCccceeEEeeeeEEEEcceecCCCceEEeeeeEEEeccc--eeeeeccCCCCCCCCCCcceEEecCCCc
Confidence 998776 7899999999999999999999643 235789999999999 8999999988899999999999996779
Q ss_pred EEEEecCCC---------CcccCcEEEEecCCC---CceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCC------
Q 002713 166 LVSVSGNDG---------KRVLSDAWALDTAQK---PYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDA------ 227 (889)
Q Consensus 166 lyv~GG~~~---------~~~lndv~~yd~~t~---~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~------ 227 (889)
|||+||+.- ....+|+|.++++.+ .|.|.++.+.+..|.||.+.+.++..+++-++|||.-.
T Consensus 245 i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~~dKw~W~kvkp~g~kPspRsgfsv~va~n~kal~FGGV~D~eeeeE 324 (521)
T KOG1230|consen 245 IVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGREDKWVWTKVKPSGVKPSPRSGFSVAVAKNHKALFFGGVCDLEEEEE 324 (521)
T ss_pred EEEEcchhHhhhhhhhhcCceeeeeeeecCCcCCCcceeEeeccCCCCCCCCCCceeEEEecCCceEEecceecccccch
Confidence 999999842 346899999999873 38999999999999999999999999999999999733
Q ss_pred --CCCcccceEEEecccCCee
Q 002713 228 --SGAPLADAYGLLMHRNGQW 246 (889)
Q Consensus 228 --~~~~~~dv~~l~~~~~~~W 246 (889)
.+..+||+|.|+..++ +|
T Consensus 325 sl~g~F~NDLy~fdlt~n-rW 344 (521)
T KOG1230|consen 325 SLSGEFFNDLYFFDLTRN-RW 344 (521)
T ss_pred hhhhhhhhhhhheecccc-hh
Confidence 2457899999999876 44
|
|
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-28 Score=280.97 Aligned_cols=240 Identities=40% Similarity=0.692 Sum_probs=206.7
Q ss_pred CCcccccceee---cCCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcE
Q 002713 11 PSYRTLETYWD---TDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKW 87 (889)
Q Consensus 11 ~~yd~~~~~w~---~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W 87 (889)
..+|..+..|. ..+..|.+|.||+++++ +++||||||...... ..++++.||+.+++|
T Consensus 91 ~~~d~~~~~w~~~~~~g~~p~~r~g~~~~~~------~~~l~lfGG~~~~~~-------------~~~~l~~~d~~t~~W 151 (482)
T KOG0379|consen 91 YVLDLESQLWTKPAATGDEPSPRYGHSLSAV------GDKLYLFGGTDKKYR-------------NLNELHSLDLSTRTW 151 (482)
T ss_pred EEeecCCcccccccccCCCCCcccceeEEEE------CCeEEEEccccCCCC-------------ChhheEeccCCCCcE
Confidence 44566667776 45678999999999999 889999999975221 489999999999999
Q ss_pred EEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEE
Q 002713 88 TRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLV 167 (889)
Q Consensus 88 ~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~ly 167 (889)
..+.+.+.+|++|++|++++++++||||||.+..+..++++|+||+.+.+ |.++.+.|..|.||++|+++++++ +++
T Consensus 152 ~~l~~~~~~P~~r~~Hs~~~~g~~l~vfGG~~~~~~~~ndl~i~d~~~~~--W~~~~~~g~~P~pR~gH~~~~~~~-~~~ 228 (482)
T KOG0379|consen 152 SLLSPTGDPPPPRAGHSATVVGTKLVVFGGIGGTGDSLNDLHIYDLETST--WSELDTQGEAPSPRYGHAMVVVGN-KLL 228 (482)
T ss_pred EEecCcCCCCCCcccceEEEECCEEEEECCccCcccceeeeeeecccccc--ceecccCCCCCCCCCCceEEEECC-eEE
Confidence 99999999999999999999999999999998777789999999999954 999999999999999999999998 555
Q ss_pred EEecCC-CCcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCC-cccceEEEecccCCe
Q 002713 168 SVSGND-GKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQ 245 (889)
Q Consensus 168 v~GG~~-~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~-~~~dv~~l~~~~~~~ 245 (889)
++||.+ +..+++|+|.||+.+. .|.++...+..|.+|.+|+++ +.+..++++||...... .+.++|.|+.+ +..
T Consensus 229 v~gG~~~~~~~l~D~~~ldl~~~--~W~~~~~~g~~p~~R~~h~~~-~~~~~~~l~gG~~~~~~~~l~~~~~l~~~-~~~ 304 (482)
T KOG0379|consen 229 VFGGGDDGDVYLNDVHILDLSTW--EWKLLPTGGDLPSPRSGHSLT-VSGDHLLLFGGGTDPKQEPLGDLYGLDLE-TLV 304 (482)
T ss_pred EEeccccCCceecceEeeecccc--eeeeccccCCCCCCcceeeeE-EECCEEEEEcCCccccccccccccccccc-ccc
Confidence 555555 7888999999999995 999999999999999999999 67778889998866544 69999999999 568
Q ss_pred eEEEeCCC-CCCCccceeEEEEECCE----EEEEcC
Q 002713 246 WEWTLAPG-VAPSPRYQHAAVFVGAR----LHVTGG 276 (889)
Q Consensus 246 W~w~~~~~-~~p~~R~~hs~~~~~~~----lyV~GG 276 (889)
|.+....+ ..|.+|..|+++..... +.++||
T Consensus 305 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (482)
T KOG0379|consen 305 WSKVESVGVVRPSPRLGHAAELIDELGKDGLGILGG 340 (482)
T ss_pred eeeeeccccccccccccccceeeccCCccceeeecC
Confidence 98888887 77999999999887433 445555
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-27 Score=280.03 Aligned_cols=235 Identities=15% Similarity=0.232 Sum_probs=194.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCcc
Q 002713 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (889)
Q Consensus 75 ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~ 154 (889)
..+..|+...++|..+.. .| .+..|+++++++.||++||........+++|+||+.+++ |..+ +++|.+|.
T Consensus 264 ~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~---~~~~~~R~ 334 (534)
T PHA03098 264 YNYITNYSPLSEINTIID---IH-YVYCFGSVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKS--WNKV---PELIYPRK 334 (534)
T ss_pred ceeeecchhhhhcccccC---cc-ccccceEEEECCEEEEECCCcCCCCeeccEEEEeCCCCe--eeEC---CCCCcccc
Confidence 445678888888987652 22 356679999999999999987666677899999999954 9887 77889999
Q ss_pred ccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCcccc
Q 002713 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLAD 234 (889)
Q Consensus 155 ~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~d 234 (889)
+|+++++++ .+|++||.++...++++++||+.++ +|+.++++ |.+|..|+++ ..+++||++||....+..+++
T Consensus 335 ~~~~~~~~~-~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~l---p~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~ 407 (534)
T PHA03098 335 NPGVTVFNN-RIYVIGGIYNSISLNTVESWKPGES--KWREEPPL---IFPRYNPCVV-NVNNLIYVIGGISKNDELLKT 407 (534)
T ss_pred cceEEEECC-EEEEEeCCCCCEecceEEEEcCCCC--ceeeCCCc---CcCCccceEE-EECCEEEEECCcCCCCcccce
Confidence 999988876 8999999987778999999999999 99998765 6788777765 467899999998766666889
Q ss_pred eEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEeccCCccccCCCC
Q 002713 235 AYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSK 314 (889)
Q Consensus 235 v~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~ 314 (889)
++.|++.++ +|...+.+ |.+|++|+++.++++|||+||...... ....+.+++||+.+++|+.+..++.
T Consensus 408 v~~yd~~t~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~~~~W~~~~~~~~------ 476 (534)
T PHA03098 408 VECFSLNTN---KWSKGSPL-PISHYGGCAIYHDGKIYVIGGISYIDN-IKVYNIVESYNPVTNKWTELSSLNF------ 476 (534)
T ss_pred EEEEeCCCC---eeeecCCC-CccccCceEEEECCEEEEECCccCCCC-CcccceEEEecCCCCceeeCCCCCc------
Confidence 999999877 77777655 789999999999999999999764332 1224669999999999999987633
Q ss_pred CCCCCCCccCcccccceEEEEECCEEEEEcCCCC
Q 002713 315 GHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348 (889)
Q Consensus 315 ~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~ 348 (889)
+|..+++++++++|||+||.++
T Consensus 477 ------------~r~~~~~~~~~~~iyv~GG~~~ 498 (534)
T PHA03098 477 ------------PRINASLCIFNNKIYVVGGDKY 498 (534)
T ss_pred ------------ccccceEEEECCEEEEEcCCcC
Confidence 8899999999999999999764
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-27 Score=259.46 Aligned_cols=230 Identities=17% Similarity=0.251 Sum_probs=185.0
Q ss_pred eeecCCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE-EecCCCCCC
Q 002713 19 YWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT-RIRPAGEPP 97 (889)
Q Consensus 19 ~w~~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~-~l~~~g~~P 97 (889)
+|...+++|.||..|+++++ +++||++||..... .++++++||+.+++|+ ++....++|
T Consensus 52 ~W~~~~~lp~~r~~~~~~~~------~~~lyviGG~~~~~--------------~~~~v~~~d~~~~~w~~~~~~~~~lp 111 (323)
T TIGR03548 52 KWVKDGQLPYEAAYGASVSV------ENGIYYIGGSNSSE--------------RFSSVYRITLDESKEELICETIGNLP 111 (323)
T ss_pred eEEEcccCCccccceEEEEE------CCEEEEEcCCCCCC--------------CceeEEEEEEcCCceeeeeeEcCCCC
Confidence 79999999999998989998 88999999976322 3789999999999983 333445678
Q ss_pred cccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCC-CCccccEEEEECCcEEEEEecCCCCc
Q 002713 98 SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP-GPRYGHVMDLVSQRYLVSVSGNDGKR 176 (889)
Q Consensus 98 ~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p-~~R~~hs~~~~~~~~lyv~GG~~~~~ 176 (889)
.+|..|++++++++||++||.. .+..++++|+||+.+++ |+.+ .++| .+|..|+++++++ +|||+||.++..
T Consensus 112 ~~~~~~~~~~~~~~iYv~GG~~-~~~~~~~v~~yd~~~~~--W~~~---~~~p~~~r~~~~~~~~~~-~iYv~GG~~~~~ 184 (323)
T TIGR03548 112 FTFENGSACYKDGTLYVGGGNR-NGKPSNKSYLFNLETQE--WFEL---PDFPGEPRVQPVCVKLQN-ELYVFGGGSNIA 184 (323)
T ss_pred cCccCceEEEECCEEEEEeCcC-CCccCceEEEEcCCCCC--eeEC---CCCCCCCCCcceEEEECC-EEEEEcCCCCcc
Confidence 8999999999999999999974 33457899999999955 9988 4555 4788888877776 899999987543
Q ss_pred ccCcEEEEecCCCCceEEEccCCCC--CCCcccceEEEEecCCEEEEEccCCCCC-------------------------
Q 002713 177 VLSDAWALDTAQKPYVWQRLNPEGD--RPSARMYATASARSDGMFLLCGGRDASG------------------------- 229 (889)
Q Consensus 177 ~lndv~~yd~~t~~~~W~~v~~~~~--~P~~r~~~~a~~~~~~~l~v~GG~~~~~------------------------- 229 (889)
..++++||+.++ +|+.++++.. .|..+..++++++.+++|||+||.+...
T Consensus 185 -~~~~~~yd~~~~--~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (323)
T TIGR03548 185 -YTDGYKYSPKKN--QWQKVADPTTDSEPISLLGAASIKINESLLLCIGGFNKDVYNDAVIDLATMKDESLKGYKKEYFL 261 (323)
T ss_pred -ccceEEEecCCC--eeEECCCCCCCCCceeccceeEEEECCCEEEEECCcCHHHHHHHHhhhhhccchhhhhhHHHHhC
Confidence 467899999999 9999987632 3455556666777889999999986431
Q ss_pred ------CcccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCC
Q 002713 230 ------APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGG 281 (889)
Q Consensus 230 ------~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~ 281 (889)
...++++.||+.++ +|..++..+..+|..++++.++++||++||....+
T Consensus 262 ~~~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~~pg 316 (323)
T TIGR03548 262 KPPEWYNWNRKILIYNVRTG---KWKSIGNSPFFARCGAALLLTGNNIFSINGELKPG 316 (323)
T ss_pred CCccccCcCceEEEEECCCC---eeeEcccccccccCchheEEECCEEEEEeccccCC
Confidence 11367999999988 78777755446899999999999999999976544
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=250.49 Aligned_cols=259 Identities=25% Similarity=0.414 Sum_probs=211.3
Q ss_pred Ccccccceee---cCCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 002713 12 SYRTLETYWD---TDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (889)
Q Consensus 12 ~yd~~~~~w~---~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~ 88 (889)
-|+..+|.|. ..++.|.+-..|..++. |.+||+|||...... ++||+|.+.-..-.|+
T Consensus 61 vYNTatnqWf~PavrGDiPpgcAA~Gfvcd------GtrilvFGGMvEYGk-------------YsNdLYELQasRWeWk 121 (830)
T KOG4152|consen 61 VYNTATNQWFAPAVRGDIPPGCAAFGFVCD------GTRILVFGGMVEYGK-------------YSNDLYELQASRWEWK 121 (830)
T ss_pred hhccccceeecchhcCCCCCchhhcceEec------CceEEEEccEeeecc-------------ccchHHHhhhhhhhHh
Confidence 4888999997 56889999999999999 889999999986543 6999999988888999
Q ss_pred EecCC----CCCCcccCccEEEEECCEEEEEcCcCCC--------CCccCcEEEEEccC--CceEEEEEeecCCCCCCcc
Q 002713 89 RIRPA----GEPPSPRAAHAAAAVGTMVVFQGGIGPA--------GHSTDDLYVLDLTN--DKFKWHRVVVQGQGPGPRY 154 (889)
Q Consensus 89 ~l~~~----g~~P~~R~~haa~~~~~~Iyv~GG~~~~--------~~~~~dv~~yD~~t--~~~~W~~v~~~g~~p~~R~ 154 (889)
++.+. |.+|-||.+|+..+++++.|+|||...+ -.+++|+|+++++- .-.-|....+.|..|.+|-
T Consensus 122 rlkp~~p~nG~pPCPRlGHSFsl~gnKcYlFGGLaNdseDpknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P~pRE 201 (830)
T KOG4152|consen 122 RLKPKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRE 201 (830)
T ss_pred hcCCCCCCCCCCCCCccCceeEEeccEeEEeccccccccCcccccchhhcceEEEEeccCCceEEEecccccCCCCCCcc
Confidence 98754 5678899999999999999999996421 25789999999983 3466999999999999999
Q ss_pred ccEEEEE-----CCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCC-
Q 002713 155 GHVMDLV-----SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS- 228 (889)
Q Consensus 155 ~hs~~~~-----~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~- 228 (889)
.|+++++ +..++|||||..+ ..+.|+|.+|+++. .|.+....|..|.||.-|++..+. +++|||||+-..
T Consensus 202 SHTAViY~eKDs~~skmvvyGGM~G-~RLgDLW~Ldl~Tl--~W~kp~~~G~~PlPRSLHsa~~IG-nKMyvfGGWVPl~ 277 (830)
T KOG4152|consen 202 SHTAVIYTEKDSKKSKMVVYGGMSG-CRLGDLWTLDLDTL--TWNKPSLSGVAPLPRSLHSATTIG-NKMYVFGGWVPLV 277 (830)
T ss_pred cceeEEEEeccCCcceEEEEccccc-ccccceeEEeccee--ecccccccCCCCCCcccccceeec-ceeEEecceeeee
Confidence 9999988 1238999999985 56999999999998 999999999999999999998754 589999998321
Q ss_pred ------------CCcccceEEEecccCCeeEEEeCC------CCCCCccceeEEEEECCEEEEEcCCCCCCCCcc---CC
Q 002713 229 ------------GAPLADAYGLLMHRNGQWEWTLAP------GVAPSPRYQHAAVFVGARLHVTGGALRGGRAIE---GE 287 (889)
Q Consensus 229 ------------~~~~~dv~~l~~~~~~~W~w~~~~------~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~---~~ 287 (889)
-.+.+.+-+++..++ .|..+. ...|.+|++|+++.+|.+|||.-|+++.....+ .+
T Consensus 278 ~~~~~~~~hekEWkCTssl~clNldt~---~W~tl~~d~~ed~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQVCC 354 (830)
T KOG4152|consen 278 MDDVKVATHEKEWKCTSSLACLNLDTM---AWETLLMDTLEDNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQVCC 354 (830)
T ss_pred ccccccccccceeeeccceeeeeecch---heeeeeeccccccccccccccceeEEeccEEEEEeccchhhHhhccccch
Confidence 134566677777766 554432 235899999999999999999999875332211 26
Q ss_pred CcEEEEECC
Q 002713 288 AAVAVLDTA 296 (889)
Q Consensus 288 ~~v~~yD~~ 296 (889)
.++|.+|++
T Consensus 355 kDlWyLdTe 363 (830)
T KOG4152|consen 355 KDLWYLDTE 363 (830)
T ss_pred hhhhhhccc
Confidence 788888875
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=251.93 Aligned_cols=257 Identities=19% Similarity=0.284 Sum_probs=187.9
Q ss_pred Ccccc--cceeecCCCCC-CCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 002713 12 SYRTL--ETYWDTDEDAP-GPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (889)
Q Consensus 12 ~yd~~--~~~w~~~~~~P-~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~ 88 (889)
.||.. ++.|...+++| .+|.+|+++++ +++||||||....... .....++++|+||+.+++|+
T Consensus 54 ~~d~~~~~~~W~~l~~~p~~~r~~~~~v~~------~~~IYV~GG~~~~~~~--------~~~~~~~~v~~YD~~~n~W~ 119 (376)
T PRK14131 54 KLDLNAPSKGWTKIAAFPGGPREQAVAAFI------DGKLYVFGGIGKTNSE--------GSPQVFDDVYKYDPKTNSWQ 119 (376)
T ss_pred EEECCCCCCCeEECCcCCCCCcccceEEEE------CCEEEEEcCCCCCCCC--------CceeEcccEEEEeCCCCEEE
Confidence 35543 57899999888 58999999999 8999999998641110 00124789999999999999
Q ss_pred EecCCCCCCcccCccEEEE-ECCEEEEEcCcCCCC---------------------------------CccCcEEEEEcc
Q 002713 89 RIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAG---------------------------------HSTDDLYVLDLT 134 (889)
Q Consensus 89 ~l~~~g~~P~~R~~haa~~-~~~~Iyv~GG~~~~~---------------------------------~~~~dv~~yD~~ 134 (889)
+++.. .|.+|.+|++++ .+++||++||..... ..++++++||+.
T Consensus 120 ~~~~~--~p~~~~~~~~~~~~~~~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~~ 197 (376)
T PRK14131 120 KLDTR--SPVGLAGHVAVSLHNGKAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDPS 197 (376)
T ss_pred eCCCC--CCCcccceEEEEeeCCEEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEECC
Confidence 98742 366788888887 799999999975210 124789999999
Q ss_pred CCceEEEEEeecCCCCC-CccccEEEEECCcEEEEEecCCCCc-ccCcEEE--EecCCCCceEEEccCCCCCCCccc---
Q 002713 135 NDKFKWHRVVVQGQGPG-PRYGHVMDLVSQRYLVSVSGNDGKR-VLSDAWA--LDTAQKPYVWQRLNPEGDRPSARM--- 207 (889)
Q Consensus 135 t~~~~W~~v~~~g~~p~-~R~~hs~~~~~~~~lyv~GG~~~~~-~lndv~~--yd~~t~~~~W~~v~~~~~~P~~r~--- 207 (889)
+++ |..+ +++|. +|.+|+++.+++ +|||+||..... ...++|. ||++++ +|..++.+ |.+|.
T Consensus 198 t~~--W~~~---~~~p~~~~~~~a~v~~~~-~iYv~GG~~~~~~~~~~~~~~~~~~~~~--~W~~~~~~---p~~~~~~~ 266 (376)
T PRK14131 198 TNQ--WKNA---GESPFLGTAGSAVVIKGN-KLWLINGEIKPGLRTDAVKQGKFTGNNL--KWQKLPDL---PPAPGGSS 266 (376)
T ss_pred CCe--eeEC---CcCCCCCCCcceEEEECC-EEEEEeeeECCCcCChhheEEEecCCCc--ceeecCCC---CCCCcCCc
Confidence 955 9987 67775 788888877775 899999975432 3455665 456777 99999876 33332
Q ss_pred ----ceEEEEecCCEEEEEccCCCCCC----------------cccceEEEecccCCeeEEEeCCCCCCCccceeEEEEE
Q 002713 208 ----YATASARSDGMFLLCGGRDASGA----------------PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV 267 (889)
Q Consensus 208 ----~~~a~~~~~~~l~v~GG~~~~~~----------------~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~ 267 (889)
.++++++.+++|||+||.+.... ....+..|++.++ +|.....+ |.+|..|+++.+
T Consensus 267 ~~~~~~~~a~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~---~W~~~~~l-p~~r~~~~av~~ 342 (376)
T PRK14131 267 QEGVAGAFAGYSNGVLLVAGGANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNG---KWQKVGEL-PQGLAYGVSVSW 342 (376)
T ss_pred CCccceEeceeECCEEEEeeccCCCCChhhhhcCCcccccCCcceeehheEEecCC---cccccCcC-CCCccceEEEEe
Confidence 22334567889999999853210 0123557787766 66666554 889999999999
Q ss_pred CCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEe
Q 002713 268 GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (889)
Q Consensus 268 ~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~ 302 (889)
+++|||+||....+ ...++|+.|+++.+.|+.
T Consensus 343 ~~~iyv~GG~~~~~---~~~~~v~~~~~~~~~~~~ 374 (376)
T PRK14131 343 NNGVLLIGGETAGG---KAVSDVTLLSWDGKKLTV 374 (376)
T ss_pred CCEEEEEcCCCCCC---cEeeeEEEEEEcCCEEEE
Confidence 99999999975433 236899999998888764
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=248.77 Aligned_cols=251 Identities=19% Similarity=0.304 Sum_probs=181.7
Q ss_pred Cccc--ccceeecCCCCC-CCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 002713 12 SYRT--LETYWDTDEDAP-GPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (889)
Q Consensus 12 ~yd~--~~~~w~~~~~~P-~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~ 88 (889)
.||+ .+++|...+++| .+|.+|+++++ +++|||+||........ ....++++|+||+.+++|+
T Consensus 33 ~~d~~~~~~~W~~l~~~p~~~R~~~~~~~~------~~~iYv~GG~~~~~~~~--------~~~~~~~v~~Yd~~~~~W~ 98 (346)
T TIGR03547 33 KLDLKKPSKGWQKIADFPGGPRNQAVAAAI------DGKLYVFGGIGKANSEG--------SPQVFDDVYRYDPKKNSWQ 98 (346)
T ss_pred EEECCCCCCCceECCCCCCCCcccceEEEE------CCEEEEEeCCCCCCCCC--------cceecccEEEEECCCCEEe
Confidence 4553 678999999999 59999999999 89999999985322100 0114789999999999999
Q ss_pred EecCCCCCCcccCccEEE-EECCEEEEEcCcCCCC---------------------------------CccCcEEEEEcc
Q 002713 89 RIRPAGEPPSPRAAHAAA-AVGTMVVFQGGIGPAG---------------------------------HSTDDLYVLDLT 134 (889)
Q Consensus 89 ~l~~~g~~P~~R~~haa~-~~~~~Iyv~GG~~~~~---------------------------------~~~~dv~~yD~~ 134 (889)
+++. .+|.+|.+|+++ +++++||++||..... ..++++++||+.
T Consensus 99 ~~~~--~~p~~~~~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~ 176 (346)
T TIGR03547 99 KLDT--RSPVGLLGASGFSLHNGQAYFTGGVNKNIFDGYFADLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPS 176 (346)
T ss_pred cCCC--CCCCcccceeEEEEeCCEEEEEcCcChHHHHHHHhhHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEECC
Confidence 9873 346678888877 6899999999975210 124789999999
Q ss_pred CCceEEEEEeecCCCCC-CccccEEEEECCcEEEEEecCCCCc-ccCcEEEEec--CCCCceEEEccCCCCCC----Ccc
Q 002713 135 NDKFKWHRVVVQGQGPG-PRYGHVMDLVSQRYLVSVSGNDGKR-VLSDAWALDT--AQKPYVWQRLNPEGDRP----SAR 206 (889)
Q Consensus 135 t~~~~W~~v~~~g~~p~-~R~~hs~~~~~~~~lyv~GG~~~~~-~lndv~~yd~--~t~~~~W~~v~~~~~~P----~~r 206 (889)
+++ |+.+ +++|. +|.+|+++++++ +|||+||..... ...+++.|++ .++ +|+.++.+.... ..+
T Consensus 177 t~~--W~~~---~~~p~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~y~~~~~~~--~W~~~~~m~~~r~~~~~~~ 248 (346)
T TIGR03547 177 TNQ--WRNL---GENPFLGTAGSAIVHKGN-KLLLINGEIKPGLRTAEVKQYLFTGGKL--EWNKLPPLPPPKSSSQEGL 248 (346)
T ss_pred CCc--eeEC---ccCCCCcCCCceEEEECC-EEEEEeeeeCCCccchheEEEEecCCCc--eeeecCCCCCCCCCccccc
Confidence 955 9998 67775 688888877776 899999986433 2356777765 556 999998773211 112
Q ss_pred cceEEEEecCCEEEEEccCCCCCC----------------cccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCE
Q 002713 207 MYATASARSDGMFLLCGGRDASGA----------------PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGAR 270 (889)
Q Consensus 207 ~~~~a~~~~~~~l~v~GG~~~~~~----------------~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~ 270 (889)
..|+ ++..+++|||+||.+..+. .+..+.+|+...+ +|.....+ |.+|..++++.++++
T Consensus 249 ~~~~-a~~~~~~Iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~---~W~~~~~l-p~~~~~~~~~~~~~~ 323 (346)
T TIGR03547 249 AGAF-AGISNGVLLVAGGANFPGAQENYKNGKLYAHEGLIKAWSSEVYALDNG---KWSKVGKL-PQGLAYGVSVSWNNG 323 (346)
T ss_pred cEEe-eeEECCEEEEeecCCCCCchhhhhcCCccccCCCCceeEeeEEEecCC---cccccCCC-CCCceeeEEEEcCCE
Confidence 2333 3456889999999853210 1234667777766 67777655 788999998899999
Q ss_pred EEEEcCCCCCCCCccCCCcEEEEE
Q 002713 271 LHVTGGALRGGRAIEGEAAVAVLD 294 (889)
Q Consensus 271 lyV~GG~~~~~~~~~~~~~v~~yD 294 (889)
|||+||....+. ..++|+.|-
T Consensus 324 iyv~GG~~~~~~---~~~~v~~~~ 344 (346)
T TIGR03547 324 VLLIGGENSGGK---AVTDVYLLS 344 (346)
T ss_pred EEEEeccCCCCC---EeeeEEEEE
Confidence 999999865432 256676653
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-25 Score=256.94 Aligned_cols=208 Identities=19% Similarity=0.255 Sum_probs=172.9
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCc
Q 002713 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (889)
Q Consensus 45 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~ 124 (889)
++.||++||..... ..+++++||+.+++|..++++ |.+|..|++++++++||++||...
T Consensus 271 ~~~lyviGG~~~~~--------------~~~~v~~Ydp~~~~W~~~~~m---~~~r~~~~~v~~~~~iYviGG~~~---- 329 (480)
T PHA02790 271 GEVVYLIGGWMNNE--------------IHNNAIAVNYISNNWIPIPPM---NSPRLYASGVPANNKLYVVGGLPN---- 329 (480)
T ss_pred CCEEEEEcCCCCCC--------------cCCeEEEEECCCCEEEECCCC---CchhhcceEEEECCEEEEECCcCC----
Confidence 88999999975321 378899999999999988854 589999999999999999999742
Q ss_pred cCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCC
Q 002713 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (889)
Q Consensus 125 ~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~ 204 (889)
.+.+++||+.+++ |..+ .++|.+|.+|+++++++ +||++||.++. .+.+.+||+.++ +|+.++++ |.
T Consensus 330 ~~sve~ydp~~n~--W~~~---~~l~~~r~~~~~~~~~g-~IYviGG~~~~--~~~ve~ydp~~~--~W~~~~~m---~~ 396 (480)
T PHA02790 330 PTSVERWFHGDAA--WVNM---PSLLKPRCNPAVASINN-VIYVIGGHSET--DTTTEYLLPNHD--QWQFGPST---YY 396 (480)
T ss_pred CCceEEEECCCCe--EEEC---CCCCCCCcccEEEEECC-EEEEecCcCCC--CccEEEEeCCCC--EEEeCCCC---CC
Confidence 2568999998855 9988 78999999999988876 99999998653 477999999999 99999876 67
Q ss_pred cccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCc
Q 002713 205 ARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAI 284 (889)
Q Consensus 205 ~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~ 284 (889)
+|.+|+++ ..+++||++||. +..|++.++ +|...+.+ |.+|..+++++++++|||+||+.+...
T Consensus 397 ~r~~~~~~-~~~~~IYv~GG~---------~e~ydp~~~---~W~~~~~m-~~~r~~~~~~v~~~~IYviGG~~~~~~-- 460 (480)
T PHA02790 397 PHYKSCAL-VFGRRLFLVGRN---------AEFYCESSN---TWTLIDDP-IYPRDNPELIIVDNKLLLIGGFYRGSY-- 460 (480)
T ss_pred ccccceEE-EECCEEEEECCc---------eEEecCCCC---cEeEcCCC-CCCccccEEEEECCEEEEECCcCCCcc--
Confidence 88777665 467899999984 456777766 77777665 789999999999999999999864321
Q ss_pred cCCCcEEEEECCCCeEEecc
Q 002713 285 EGEAAVAVLDTAAGVWLDRN 304 (889)
Q Consensus 285 ~~~~~v~~yD~~t~~W~~v~ 304 (889)
.+++++||+++++|+...
T Consensus 461 --~~~ve~Yd~~~~~W~~~~ 478 (480)
T PHA02790 461 --IDTIEVYNNRTYSWNIWD 478 (480)
T ss_pred --cceEEEEECCCCeEEecC
Confidence 478999999999998654
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-23 Score=242.00 Aligned_cols=206 Identities=15% Similarity=0.245 Sum_probs=169.2
Q ss_pred EEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCcccCcEEEE
Q 002713 105 AAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWAL 184 (889)
Q Consensus 105 a~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~y 184 (889)
++..++.||++||... ....+.+++||+.+++ |..+ .+++.+|..++++++++ .+|++||.++. +.+++|
T Consensus 267 ~~~~~~~lyviGG~~~-~~~~~~v~~Ydp~~~~--W~~~---~~m~~~r~~~~~v~~~~-~iYviGG~~~~---~sve~y 336 (480)
T PHA02790 267 STHVGEVVYLIGGWMN-NEIHNNAIAVNYISNN--WIPI---PPMNSPRLYASGVPANN-KLYVVGGLPNP---TSVERW 336 (480)
T ss_pred eEEECCEEEEEcCCCC-CCcCCeEEEEECCCCE--EEEC---CCCCchhhcceEEEECC-EEEEECCcCCC---CceEEE
Confidence 3458999999999753 3467889999999955 9998 78899999999988875 99999998642 679999
Q ss_pred ecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeEEEeCCCCCCCccceeEE
Q 002713 185 DTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAA 264 (889)
Q Consensus 185 d~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~ 264 (889)
|+.++ +|..++++ |.+|..++++ ..+++||++||.+.. .+.+.+|++.++ +|...+.+ +.+|++|++
T Consensus 337 dp~~n--~W~~~~~l---~~~r~~~~~~-~~~g~IYviGG~~~~---~~~ve~ydp~~~---~W~~~~~m-~~~r~~~~~ 403 (480)
T PHA02790 337 FHGDA--AWVNMPSL---LKPRCNPAVA-SINNVIYVIGGHSET---DTTTEYLLPNHD---QWQFGPST-YYPHYKSCA 403 (480)
T ss_pred ECCCC--eEEECCCC---CCCCcccEEE-EECCEEEEecCcCCC---CccEEEEeCCCC---EEEeCCCC-CCccccceE
Confidence 99999 99999876 6788766555 568899999997543 356888998877 77777665 789999999
Q ss_pred EEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEeccCCccccCCCCCCCCCCCccCcccccceEEEEECCEEEEEc
Q 002713 265 VFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYG 344 (889)
Q Consensus 265 ~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~G 344 (889)
++++++|||+||. +++||+++++|+.++.++. +|..+++++++++||++|
T Consensus 404 ~~~~~~IYv~GG~------------~e~ydp~~~~W~~~~~m~~------------------~r~~~~~~v~~~~IYviG 453 (480)
T PHA02790 404 LVFGRRLFLVGRN------------AEFYCESSNTWTLIDDPIY------------------PRDNPELIIVDNKLLLIG 453 (480)
T ss_pred EEECCEEEEECCc------------eEEecCCCCcEeEcCCCCC------------------CccccEEEEECCEEEEEC
Confidence 9999999999982 6789999999999998844 899999999999999999
Q ss_pred CCCC------CCCcccccccEEEcc
Q 002713 345 GLKG------AFCADILLDDFLVAE 363 (889)
Q Consensus 345 G~~~------~~~~~~~~~d~~~l~ 363 (889)
|.++ .+.||+..+.|...|
T Consensus 454 G~~~~~~~~~ve~Yd~~~~~W~~~~ 478 (480)
T PHA02790 454 GFYRGSYIDTIEVYNNRTYSWNIWD 478 (480)
T ss_pred CcCCCcccceEEEEECCCCeEEecC
Confidence 9753 346666666665543
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.9e-23 Score=210.89 Aligned_cols=185 Identities=21% Similarity=0.366 Sum_probs=131.5
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCcc--eeeEEEeccccCCCCChHHHHHHHHHHhhc---CCCcEEEecCCCccc
Q 002713 588 KVFGDLHGQFGDLMRLFDEYGFPSTAGDIT--YIDYLFLGDYVDRGQHSLETITLLLALKIE---YPENVHLIRGNHEAA 662 (889)
Q Consensus 588 ~vvGDiHG~~~~l~~il~~~g~~~~~~~~~--~~~~vfLGD~vDRG~~s~evl~ll~~lk~~---~p~~v~llrGNHE~~ 662 (889)
+||||||||++.|.++|+..++.+....|. ...+||||||||||+++.||+.+|++|+.+ .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 589999999999999999988643221111 128999999999999999999999999754 457899999999999
Q ss_pred hhhhhcCChHH-HHHHhCCC--Cchhhh---hhhhhhcCCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCC
Q 002713 663 DINALFGFRLE-CIERMGEN--DGIWAW---TRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAG 736 (889)
Q Consensus 663 ~~~~~~gf~~e-~~~~~~~~--~~~~~~---~~~~~~f~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~ 736 (889)
.++..+.+... ....+... .....+ ..+.++++.||+...+++ ++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~~-~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVND-TLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEECC-EEEEeCCcHH--------------------
Confidence 98755433211 11111100 001122 244788999999998874 8889999922
Q ss_pred CchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecc
Q 002713 737 SIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSA 811 (889)
Q Consensus 737 ~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa 811 (889)
+|+..-.. +... ..-+...+.++|+.++.++||+||+.++.|....++|++|+|.+.
T Consensus 140 -------~w~r~y~~-------~~~~----~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 140 -------LWYRGYSK-------ETSD----KECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred -------HHhhHhhh-------hhhh----ccchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 33321100 0000 001236788999999999999999999888766899999999874
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-22 Score=211.77 Aligned_cols=131 Identities=22% Similarity=0.393 Sum_probs=99.6
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCC---cceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccc
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGD---ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 662 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~~~~~~---~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 662 (889)
+++||||||||++.|.++|+++++....+. ....++||||||||||++|+|||.+|++|. .+.++++||||||.+
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNK 79 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHH
Confidence 589999999999999999999987411100 001279999999999999999999999885 446899999999999
Q ss_pred hhhhhcCC-------hHHHHHHhCCC---CchhhhhhhhhhcCCCceEEEEc-CeEEEecCCCCCCC
Q 002713 663 DINALFGF-------RLECIERMGEN---DGIWAWTRFNQLFNCLPLAALIE-KKIICMHGGIGRSI 718 (889)
Q Consensus 663 ~~~~~~gf-------~~e~~~~~~~~---~~~~~~~~~~~~f~~LPlaa~i~-~~i~~vHgGi~~~~ 718 (889)
.++...+- ..+.+..|... ....+++.+.++|+.||++..++ ++++|||||+.|..
T Consensus 80 ~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 80 LYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 88765431 12334444321 11236678899999999998874 67999999998763
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-21 Score=204.41 Aligned_cols=130 Identities=23% Similarity=0.427 Sum_probs=99.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCC----CcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCc
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAG----DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 660 (889)
Q Consensus 585 ~~i~vvGDiHG~~~~l~~il~~~g~~~~~~----~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 660 (889)
.||.||||||||+.+|+++|+.+++.+.+. .....++||||||||||++|.|||.+|++|+.. .++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 379999999999999999999998864320 000127999999999999999999999998754 57999999999
Q ss_pred cchhhhhcCCh-------HHHHHHhCCCCchhhhhhhhhhcCCCceEEEEc-CeEEEecCCCCCC
Q 002713 661 AADINALFGFR-------LECIERMGENDGIWAWTRFNQLFNCLPLAALIE-KKIICMHGGIGRS 717 (889)
Q Consensus 661 ~~~~~~~~gf~-------~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~-~~i~~vHgGi~~~ 717 (889)
.+.++...+.. .+....+... ...+.+.+.++|+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAE-SEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhc-cHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 99887543311 2223333221 2345677889999999998876 4799999998875
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-21 Score=204.38 Aligned_cols=160 Identities=23% Similarity=0.374 Sum_probs=114.4
Q ss_pred eEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhh
Q 002713 587 VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINA 666 (889)
Q Consensus 587 i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~ 666 (889)
++||||||||++.|.++|+.+++.+..+ .++|||||||||++|+|||.+|++|+ .++++|+||||.+.++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D-----~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~ 71 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKD-----RLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAV 71 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCC-----EEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHH
Confidence 5899999999999999999999864332 89999999999999999999999986 58999999999999887
Q ss_pred hcCChH----HHHHHhCCCCchhhhhhhhhhcCCCceEEEEcC-eEEEecCCCCCCCcCHHHhhcccCCcc----cCCCC
Q 002713 667 LFGFRL----ECIERMGENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGIGRSIHSVEQIEKLERPIT----MDAGS 737 (889)
Q Consensus 667 ~~gf~~----e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~i~~vHgGi~~~~~~~~~i~~~~rp~~----~~~~~ 737 (889)
.+|+.. +....+-. ....+.+.++++.+|+...+++ ++++|||||+|.. ++++...+.+.++ -+...
T Consensus 72 ~~g~~~~~~~~t~~~~l~---~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w-~~~~~~~~a~eve~~l~~~~~~ 147 (257)
T cd07422 72 AAGIKKPKKKDTLDDILN---APDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW-SIEQALKLAREVEAALRGPNYR 147 (257)
T ss_pred hcCccccccHhHHHHHHh---ccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCcHH
Confidence 666431 11111111 1123567899999999998875 8999999999985 4444433333221 11222
Q ss_pred chhhccccCCCCCCCCCCCcccCCCCCc
Q 002713 738 IILMDLLWSDPTENDSIEGLRPNARGPG 765 (889)
Q Consensus 738 ~~~~dllWsdP~~~~~~~~~~~n~rg~~ 765 (889)
.++..+.|+.|.. |.++..|..
T Consensus 148 ~~~~~my~~~p~~------W~~~l~g~~ 169 (257)
T cd07422 148 EFLKNMYGNEPDR------WSDDLTGID 169 (257)
T ss_pred HHHHHhhCCCCcc------cCcccCccH
Confidence 2455556666642 555555543
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=195.95 Aligned_cols=123 Identities=23% Similarity=0.329 Sum_probs=92.9
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCC--cceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhh
Q 002713 588 KVFGDLHGQFGDLMRLFDEYGFPSTAGD--ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 665 (889)
Q Consensus 588 ~vvGDiHG~~~~l~~il~~~g~~~~~~~--~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 665 (889)
+||||||||++.|.++|+.+++....+. ....++|||||||||||+|.|||.+|++++.. .++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 6999999999999999999987532100 00118999999999999999999999998643 5899999999999876
Q ss_pred hhcCCh-----------------HHHHHHhCCCCchhhhhhhhhhcCCCceEEEEcCeEEEecCCCC
Q 002713 666 ALFGFR-----------------LECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIG 715 (889)
Q Consensus 666 ~~~gf~-----------------~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHgGi~ 715 (889)
...+.. .+..+.++. ....++.+.++|+.||+...++ +++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE--HSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhc--cchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 443210 122233321 1235677889999999998775 5999999986
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-20 Score=199.00 Aligned_cols=219 Identities=19% Similarity=0.329 Sum_probs=141.4
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhh
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 665 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 665 (889)
.++||||||||++.|.++|+.+++.+..+ .++|||||||||++|+||+.+|+++ +.++++|+||||.+.+.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D-----~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~ 72 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKD-----TLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLA 72 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCC-----EEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHH
Confidence 58999999999999999999998754332 7999999999999999999999987 35799999999999888
Q ss_pred hhcCChH----HHHHHhCCCCchhhhhhhhhhcCCCceEEEE-cCeEEEecCCCCCCCcCHHHhhcc----cCCcccCCC
Q 002713 666 ALFGFRL----ECIERMGENDGIWAWTRFNQLFNCLPLAALI-EKKIICMHGGIGRSIHSVEQIEKL----ERPITMDAG 736 (889)
Q Consensus 666 ~~~gf~~----e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i-~~~i~~vHgGi~~~~~~~~~i~~~----~rp~~~~~~ 736 (889)
..+|+.. +....+-. ....+.+.++++.||+...+ ++++++||||++|.. ++++...+ +..+.-+..
T Consensus 73 ~~~g~~~~~~~~~l~~~l~---~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~-~~~~~~~~a~eve~~l~~~~~ 148 (275)
T PRK00166 73 VAAGIKRNKKKDTLDPILE---APDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW-DLATALALAREVEAVLRSDDY 148 (275)
T ss_pred hhcCCccccchhHHHHHHc---cccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCcH
Confidence 7776531 11112111 12345678899999999887 568999999999975 33332222 112221222
Q ss_pred CchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHH--HHHHHhcC-----------------------------CeE
Q 002713 737 SIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV--SDFCKRNK-----------------------------LQL 785 (889)
Q Consensus 737 ~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~--~~fl~~~~-----------------------------l~~ 785 (889)
..++..+.|+.|.. |.++..|.....|--.++ -+||...| -..
T Consensus 149 ~~~~~~my~~~p~~------W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~ 222 (275)
T PRK00166 149 RDFLANMYGNEPDR------WSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYT 222 (275)
T ss_pred HHHHHHhcCCCcCc------cCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCe
Confidence 22555666666642 443333322111211111 11222222 336
Q ss_pred EEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcC
Q 002713 786 IIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGR 829 (889)
Q Consensus 786 iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~ 829 (889)
||-||-....|... ...++.|=+..-+ ++.=..|.++.
T Consensus 223 i~fGHwa~l~G~~~--~~~~~~LDtGcvw----gg~Lta~~l~~ 260 (275)
T PRK00166 223 IVFGHWAALEGLTT--PPNIIALDTGCVW----GGKLTALRLED 260 (275)
T ss_pred EEEecCcccCCccC--CCCeEEeeccccc----CCeEEEEEeCC
Confidence 89999998778765 5668888776433 23334455543
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-20 Score=197.59 Aligned_cols=126 Identities=25% Similarity=0.369 Sum_probs=101.2
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhh
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 665 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 665 (889)
.++||||||||+++|.++|+++++.+..+ .++||||||||||+|+|||.+|.+++ .++++|+||||.+.++
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D-----~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~ 72 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQD-----TLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLA 72 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCC-----EEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHH
Confidence 48999999999999999999999865432 79999999999999999999999874 5688999999999998
Q ss_pred hhcCCh-----HHHHHHhCCCCchhhhhhhhhhcCCCceEEEEc-CeEEEecCCCCCCCcCHHHhh
Q 002713 666 ALFGFR-----LECIERMGENDGIWAWTRFNQLFNCLPLAALIE-KKIICMHGGIGRSIHSVEQIE 725 (889)
Q Consensus 666 ~~~gf~-----~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~-~~i~~vHgGi~~~~~~~~~i~ 725 (889)
..+|+. +.....+. ....+.+.++++.+|+....+ .++++|||||+|.. ++++..
T Consensus 73 ~~~g~~~~~~~d~l~~~l~----a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w-~l~~a~ 133 (279)
T TIGR00668 73 VFAGISRNKPKDRLDPLLE----APDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW-DLQTAK 133 (279)
T ss_pred HhcCCCccCchHHHHHHHH----ccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC-cHHHHH
Confidence 888762 22222121 124567889999999997765 46999999999985 455443
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=188.69 Aligned_cols=159 Identities=24% Similarity=0.323 Sum_probs=108.9
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCC-cEEEecCCCccchh
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPE-NVHLIRGNHEAADI 664 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~~ 664 (889)
++++||||||+++.|.++|+.+.............+||||||||||++|.||+.+|++++..+|. ++++|+||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 68999999999999999998765321100001126999999999999999999999999999876 68999999998876
Q ss_pred hhhcCC---------h------------------------------------------------------HHHHHHhCCC
Q 002713 665 NALFGF---------R------------------------------------------------------LECIERMGEN 681 (889)
Q Consensus 665 ~~~~gf---------~------------------------------------------------------~e~~~~~~~~ 681 (889)
..+... . .+....||-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 544321 0 1222333322
Q ss_pred Cchh-----hhhhhhhhcCCCceEEEEcC------------eEEEecCCCCCCCcCHHHhhccc-CCcccCCCCchhhcc
Q 002713 682 DGIW-----AWTRFNQLFNCLPLAALIEK------------KIICMHGGIGRSIHSVEQIEKLE-RPITMDAGSIILMDL 743 (889)
Q Consensus 682 ~~~~-----~~~~~~~~f~~LPlaa~i~~------------~i~~vHgGi~~~~~~~~~i~~~~-rp~~~~~~~~~~~dl 743 (889)
.+.. +=....+|++.||+....++ +.+|||||+.|.+.--+|.+.+. +-... .-.|+
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~-----p~~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEEDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSI-----PKIAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeCcccccccccccccceEEEEcccCCCCChHHhhhhhhcccccc-----ccccc
Confidence 1111 11356788999999877654 23999999999976555655543 11111 23478
Q ss_pred ccCCCC
Q 002713 744 LWSDPT 749 (889)
Q Consensus 744 lWsdP~ 749 (889)
||....
T Consensus 238 l~~R~~ 243 (304)
T cd07421 238 LSGRKN 243 (304)
T ss_pred cccchh
Confidence 887764
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-19 Score=188.12 Aligned_cols=120 Identities=26% Similarity=0.363 Sum_probs=90.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchh
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 585 ~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
++++||||||||+..|+++|+.+++.+..+ +++|||||||||++|.|||.+|.. ..++.|+||||.+.+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D-----~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l 85 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRD-----LLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMAL 85 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccC-----EEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHH
Confidence 489999999999999999999998763322 799999999999999999999965 358899999999988
Q ss_pred hhhcCChHHHHHHhCC-------CCchhhhhhhhhhcCCCceEEEEc---CeEEEecCCCC
Q 002713 665 NALFGFRLECIERMGE-------NDGIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIG 715 (889)
Q Consensus 665 ~~~~gf~~e~~~~~~~-------~~~~~~~~~~~~~f~~LPlaa~i~---~~i~~vHgGi~ 715 (889)
+...+-....+...+. ......+..+.++++.||+...++ +++++||||++
T Consensus 86 ~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 86 DALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 7653321111111110 011223456668999999998764 57999999984
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=182.47 Aligned_cols=174 Identities=24% Similarity=0.353 Sum_probs=119.2
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCC--CCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccch
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFP--STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAAD 663 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~--~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 663 (889)
++++||||||++..|.++++.+... +.+ .+||||||||||++|.||+.+|+.++. .+.++++|+||||.+.
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d------~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~ 74 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEE------TIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEF 74 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCC------EEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHH
Confidence 5899999999999999999988543 223 799999999999999999999999754 4568999999999987
Q ss_pred hhhhcC--------------ChHHHHHHhCCCCc---------------------------hhhhhhhhhhcCCCceEEE
Q 002713 664 INALFG--------------FRLECIERMGENDG---------------------------IWAWTRFNQLFNCLPLAAL 702 (889)
Q Consensus 664 ~~~~~g--------------f~~e~~~~~~~~~~---------------------------~~~~~~~~~~f~~LPlaa~ 702 (889)
++...+ ...+.+..|+-... ...+..+..+++.||+...
T Consensus 75 l~~~~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~ 154 (235)
T PHA02239 75 YNIMENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK 154 (235)
T ss_pred HHHHhCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE
Confidence 654321 11334455542211 0123455668899999988
Q ss_pred EcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcC
Q 002713 703 IEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNK 782 (889)
Q Consensus 703 i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~ 782 (889)
.+ +++|||||+.|... +++ +-..+++|.+. . .+.. +|
T Consensus 155 ~~-~~ifVHAGi~p~~~-~~~--------------q~~~~llWiR~-f-------~~~~-------~g------------ 191 (235)
T PHA02239 155 ED-KYIFSHSGGVSWKP-VEE--------------QTIDQLIWSRD-F-------QPRK-------DG------------ 191 (235)
T ss_pred EC-CEEEEeCCCCCCCC-hhh--------------CCHhHeEEecc-c-------CCCC-------CC------------
Confidence 86 59999999987622 211 13468899875 2 1111 11
Q ss_pred CeEEEEeccccccceEEecCCeEEEEecc
Q 002713 783 LQLIIRAHECVMDGFERFAQGQLITLFSA 811 (889)
Q Consensus 783 l~~iiR~H~~~~~G~~~~~~~~~itvfSa 811 (889)
+.||-||+++..+.... .++.|.|-.-
T Consensus 192 -~~vV~GHTp~~~~~~~~-~~~~I~IDtG 218 (235)
T PHA02239 192 -FTYVCGHTPTDSGEVEI-NGDMLMCDVG 218 (235)
T ss_pred -cEEEECCCCCCCCcccc-cCCEEEeecC
Confidence 26788899886654322 2345666654
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.8e-19 Score=182.84 Aligned_cols=147 Identities=27% Similarity=0.373 Sum_probs=104.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchh
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 585 ~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
++++|||||||++.+|.++++..++.+..+ .++|+|||||||+++.||+.+|.. ..+++|+||||.+.+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d-----~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~ 69 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARD-----RLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAI 69 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCC-----EEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHH
Confidence 479999999999999999999988653221 799999999999999999999875 368999999999998
Q ss_pred hhhcC--ChHHHHHHhCCCC-----chhhhhhhhhhcCCCceEEEEc---CeEEEecCCCCCCCcCHHHhhcccCCcccC
Q 002713 665 NALFG--FRLECIERMGEND-----GIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIGRSIHSVEQIEKLERPITMD 734 (889)
Q Consensus 665 ~~~~g--f~~e~~~~~~~~~-----~~~~~~~~~~~f~~LPlaa~i~---~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~ 734 (889)
....+ +..+.+.+.+... ....++.+.++|+.||+...++ .+++|||||+.+... .+.+.. .+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~--~~~~-- 144 (207)
T cd07424 70 DALRAEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA--VTLR-- 144 (207)
T ss_pred hHhhCCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc--cccC--
Confidence 87655 2333434333221 0113455778999999999875 479999999965531 111110 0111
Q ss_pred CCCchhhccccCCCC
Q 002713 735 AGSIILMDLLWSDPT 749 (889)
Q Consensus 735 ~~~~~~~dllWsdP~ 749 (889)
.....+++|++|.
T Consensus 145 --~~~~~~~~w~~~~ 157 (207)
T cd07424 145 --PEDIEELLWSRTR 157 (207)
T ss_pred --cccceeeeeccch
Confidence 1245678998765
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.3e-18 Score=177.04 Aligned_cols=120 Identities=25% Similarity=0.300 Sum_probs=87.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchh
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 585 ~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
++++||||||||+..|+++|+.+.+.+..+ .++|||||||||+++.||+.+|.+ .+++.||||||.+.+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d-----~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~ 83 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETD-----LLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMAL 83 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCC-----EEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHH
Confidence 489999999999999999999987654332 799999999999999999999864 468999999999988
Q ss_pred hhhcCChHHHHHHhCCC-------CchhhhhhhhhhcCCCceEEEEc---CeEEEecCCCC
Q 002713 665 NALFGFRLECIERMGEN-------DGIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIG 715 (889)
Q Consensus 665 ~~~~gf~~e~~~~~~~~-------~~~~~~~~~~~~f~~LPlaa~i~---~~i~~vHgGi~ 715 (889)
+....-....+...+.. ...........+++.||+...+. .++++||||++
T Consensus 84 ~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 84 DAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 75422111111111100 00112233456889999998774 47999999983
|
|
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-14 Score=153.60 Aligned_cols=282 Identities=17% Similarity=0.205 Sum_probs=205.6
Q ss_pred cCCCCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCC--CcEEEecCCCCCCcc
Q 002713 22 TDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLT--RKWTRIRPAGEPPSP 99 (889)
Q Consensus 22 ~~~~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t--~~W~~l~~~g~~P~~ 99 (889)
..|++|.+--+-+...+ ++.+||-=|.. -...|.+|+.. ..|+++....- .+
T Consensus 29 ~lPdlPvg~KnG~Ga~i------g~~~YVGLGs~------------------G~afy~ldL~~~~k~W~~~a~FpG--~~ 82 (381)
T COG3055 29 QLPDLPVGFKNGAGALI------GDTVYVGLGSA------------------GTAFYVLDLKKPGKGWTKIADFPG--GA 82 (381)
T ss_pred cCCCCCcccccccccee------cceEEEEeccC------------------CccceehhhhcCCCCceEcccCCC--cc
Confidence 56778887777788888 78898877732 34578888876 58999985432 57
Q ss_pred cCccEEEEECCEEEEEcCcCCCC----CccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCC
Q 002713 100 RAAHAAAAVGTMVVFQGGIGPAG----HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGK 175 (889)
Q Consensus 100 R~~haa~~~~~~Iyv~GG~~~~~----~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~ 175 (889)
|...++++++++||+|||.+... ...+|+|+||+.+++ |+++.+ ..|..-.+|+++...+..+|++||.+..
T Consensus 83 rnqa~~a~~~~kLyvFgG~Gk~~~~~~~~~nd~Y~y~p~~ns--W~kl~t--~sP~gl~G~~~~~~~~~~i~f~GGvn~~ 158 (381)
T COG3055 83 RNQAVAAVIGGKLYVFGGYGKSVSSSPQVFNDAYRYDPSTNS--WHKLDT--RSPTGLVGASTFSLNGTKIYFFGGVNQN 158 (381)
T ss_pred cccchheeeCCeEEEeeccccCCCCCceEeeeeEEecCCCCh--hheecc--ccccccccceeEecCCceEEEEccccHH
Confidence 99999999999999999987443 356999999999965 999955 3456688999988888899999996421
Q ss_pred ----------------------------------cccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEE
Q 002713 176 ----------------------------------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLL 221 (889)
Q Consensus 176 ----------------------------------~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v 221 (889)
....+++.|++.++ +|+.+.. .|..-...++++..++++.+
T Consensus 159 if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy~p~~n--~W~~~G~---~pf~~~aGsa~~~~~n~~~l 233 (381)
T COG3055 159 IFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSYDPSTN--QWRNLGE---NPFYGNAGSAVVIKGNKLTL 233 (381)
T ss_pred hhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhcccccccccccccc--hhhhcCc---CcccCccCcceeecCCeEEE
Confidence 13468899999999 9988743 35544455778888998999
Q ss_pred EccCCCCCCcccceEEEecccCCeeEEEeCCCCCCCc------cceeEEEEECCEEEEEcCCCC---------------C
Q 002713 222 CGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSP------RYQHAAVFVGARLHVTGGALR---------------G 280 (889)
Q Consensus 222 ~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~------R~~hs~~~~~~~lyV~GG~~~---------------~ 280 (889)
+-|.-..+.....++.++...+ .-+|..++..++.. ..++-.-..++.++|.||..- .
T Consensus 234 InGEiKpGLRt~~~k~~~~~~~-~~~w~~l~~lp~~~~~~~eGvAGaf~G~s~~~~lv~GGAnF~Ga~~~y~~Gk~~AH~ 312 (381)
T COG3055 234 INGEIKPGLRTAEVKQADFGGD-NLKWLKLSDLPAPIGSNKEGVAGAFSGKSNGEVLVAGGANFPGALKAYKNGKFYAHE 312 (381)
T ss_pred EcceecCCccccceeEEEeccC-ceeeeeccCCCCCCCCCccccceeccceeCCeEEEecCCCChhHHHHHHhccccccc
Confidence 9998777776777777776633 34666665443222 222222334788999999652 1
Q ss_pred CCCccCCCcEEEEECCCCeEEeccCCccccCCCCCCCCCCCccCcccccceEEEEECCEEEEEcCCCCCCCcccccccEE
Q 002713 281 GRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFL 360 (889)
Q Consensus 281 ~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v~~~lyv~GG~~~~~~~~~~~~d~~ 360 (889)
+-......+|++|| .+.|+.+..++. ++++.+++..++.||++||-... ...+.+++
T Consensus 313 Gl~K~w~~~Vy~~d--~g~Wk~~GeLp~------------------~l~YG~s~~~nn~vl~IGGE~~~---Gka~~~v~ 369 (381)
T COG3055 313 GLSKSWNSEVYIFD--NGSWKIVGELPQ------------------GLAYGVSLSYNNKVLLIGGETSG---GKATTRVY 369 (381)
T ss_pred chhhhhhceEEEEc--CCceeeecccCC------------------CccceEEEecCCcEEEEccccCC---CeeeeeEE
Confidence 22233467899998 899999998844 88889999999999999995441 34455555
Q ss_pred Ec
Q 002713 361 VA 362 (889)
Q Consensus 361 ~l 362 (889)
.+
T Consensus 370 ~l 371 (381)
T COG3055 370 SL 371 (381)
T ss_pred EE
Confidence 43
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.6e-16 Score=169.65 Aligned_cols=317 Identities=17% Similarity=0.267 Sum_probs=213.6
Q ss_pred CCCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccCccE
Q 002713 25 DAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHA 104 (889)
Q Consensus 25 ~~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~~ha 104 (889)
.-|..|.||.|+..+. .+.||++||..+... ..|+|.|....+.|..++..+..|..|.+|-
T Consensus 256 ~~p~~RgGHQMV~~~~----~~CiYLYGGWdG~~~--------------l~DFW~Y~v~e~~W~~iN~~t~~PG~RsCHR 317 (723)
T KOG2437|consen 256 NRPGMRGGHQMVIDVQ----TECVYLYGGWDGTQD--------------LADFWAYSVKENQWTCINRDTEGPGARSCHR 317 (723)
T ss_pred cCccccCcceEEEeCC----CcEEEEecCcccchh--------------HHHHHhhcCCcceeEEeecCCCCCcchhhhh
Confidence 4688999999999843 569999999987653 7899999999999999998888999999999
Q ss_pred EEEECC--EEEEEcCcCCCC-----CccCcEEEEEccCCceEEEEEeec---CCCCCCccccEEEEECC-cEEEEEecCC
Q 002713 105 AAAVGT--MVVFQGGIGPAG-----HSTDDLYVLDLTNDKFKWHRVVVQ---GQGPGPRYGHVMDLVSQ-RYLVSVSGND 173 (889)
Q Consensus 105 a~~~~~--~Iyv~GG~~~~~-----~~~~dv~~yD~~t~~~~W~~v~~~---g~~p~~R~~hs~~~~~~-~~lyv~GG~~ 173 (889)
++.... ++|+.|-+-+.. ..-.|+|+||.+++. |.-+... ...|..-+.|.|++.++ +++|||||+.
T Consensus 318 MVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~~~--W~~ls~dt~~dGGP~~vfDHqM~Vd~~k~~iyVfGGr~ 395 (723)
T KOG2437|consen 318 MVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDTNT--WMLLSEDTAADGGPKLVFDHQMCVDSEKHMIYVFGGRI 395 (723)
T ss_pred hhhhhhHhHHhhhhhccccccccccccccceEEEecCCce--eEEecccccccCCcceeecceeeEecCcceEEEecCee
Confidence 988765 999999864222 234799999999955 9877532 23688999999999865 3699999984
Q ss_pred CC---cccCcEEEEecCCCCceEEEccCC--CCC-----CCcccceEEEEe-cCCEEEEEccCCCCCCcccceEEEeccc
Q 002713 174 GK---RVLSDAWALDTAQKPYVWQRLNPE--GDR-----PSARMYATASAR-SDGMFLLCGGRDASGAPLADAYGLLMHR 242 (889)
Q Consensus 174 ~~---~~lndv~~yd~~t~~~~W~~v~~~--~~~-----P~~r~~~~a~~~-~~~~l~v~GG~~~~~~~~~dv~~l~~~~ 242 (889)
-. -....+|.||+... .|..+... ... -..|.+|++-.. .+.++|+|||...+.+ ++-.++|++..
T Consensus 396 ~~~~e~~f~GLYaf~~~~~--~w~~l~e~~~~~~~vvE~~~sR~ghcmE~~~~n~~ly~fggq~s~~E-l~L~f~y~I~~ 472 (723)
T KOG2437|consen 396 LTCNEPQFSGLYAFNCQCQ--TWKLLREDSCNAGPVVEDIQSRIGHCMEFHSKNRCLYVFGGQRSKTE-LNLFFSYDIDS 472 (723)
T ss_pred ccCCCccccceEEEecCCc--cHHHHHHHHhhcCcchhHHHHHHHHHHHhcCCCCeEEeccCcccceE-Eeehhcceecc
Confidence 32 34788999999998 78766421 111 235777777655 4668999998765543 44455554432
Q ss_pred CCeeEEE----eCCCCCCCccceeEEEEE---CCEEEEEcCCCCCCC--CccCCCcEEEEECCCCeEEeccCCccccCCC
Q 002713 243 NGQWEWT----LAPGVAPSPRYQHAAVFV---GARLHVTGGALRGGR--AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTS 313 (889)
Q Consensus 243 ~~~W~w~----~~~~~~p~~R~~hs~~~~---~~~lyV~GG~~~~~~--~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~ 313 (889)
.+.=.-. ....+.|++-+.-- +.. .+.|++.-|...... ..+..+++|+|+..+..|..+..+...+..+
T Consensus 473 E~~~~~s~~~k~dsS~~pS~~f~qR-s~~dp~~~~i~~~~G~~~~~~~~e~~~rns~wi~~i~~~~w~cI~~I~~~~~d~ 551 (723)
T KOG2437|consen 473 EHVDIISDGTKKDSSMVPSTGFTQR-ATIDPELNEIHVLSGLSKDKEKREENVRNSFWIYDIVRNSWSCIYKIDQAAKDN 551 (723)
T ss_pred ccchhhhccCcCccccCCCcchhhh-cccCCCCcchhhhcccchhccCccccccCcEEEEEecccchhhHhhhHHhhccC
Confidence 2100000 01122222221111 222 456777767643221 1223689999999999999887664322211
Q ss_pred CC------CCCCCCccCcccccceEEEEE--CCEEEEEcCCCCCCCcc-cccccEEEccCC
Q 002713 314 KG------HGEHDPSLELMRRCRHASASI--GVRIYIYGGLKGAFCAD-ILLDDFLVAENS 365 (889)
Q Consensus 314 ~~------~~~~~~~~~p~~R~~h~~~~v--~~~lyv~GG~~~~~~~~-~~~~d~~~l~~~ 365 (889)
.+ ...++....+.+|+.|+.++. ..-+|.+||..+..++. ..++|.|.++..
T Consensus 552 dtvfsvpFp~ks~~~~~~~~rf~h~~~~dL~~~~~yl~Ggn~~~~~~~~m~l~dfW~l~I~ 612 (723)
T KOG2437|consen 552 DTVFSVPFPTKSLQEEEPCPRFAHQLVYDLLHKVHYLFGGNPGKSCSPKMRLDDFWSLKIC 612 (723)
T ss_pred CceeeccCCcccccceeccccchhHHHHHHhhhhhhhhcCCCCCCCCchhhhhhHHHHhhc
Confidence 11 112223344778888887765 44599999998866655 556788876644
|
|
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.2e-14 Score=148.54 Aligned_cols=245 Identities=20% Similarity=0.339 Sum_probs=174.8
Q ss_pred cceeecCCCCC-CCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCC
Q 002713 17 ETYWDTDEDAP-GPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGE 95 (889)
Q Consensus 17 ~~~w~~~~~~P-~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~ 95 (889)
...|+..++.| .+|.+.+++++ +++||||||....... .-.+.+|+|+||+.+++|+++.+..
T Consensus 69 ~k~W~~~a~FpG~~rnqa~~a~~------~~kLyvFgG~Gk~~~~---------~~~~~nd~Y~y~p~~nsW~kl~t~s- 132 (381)
T COG3055 69 GKGWTKIADFPGGARNQAVAAVI------GGKLYVFGGYGKSVSS---------SPQVFNDAYRYDPSTNSWHKLDTRS- 132 (381)
T ss_pred CCCceEcccCCCcccccchheee------CCeEEEeeccccCCCC---------CceEeeeeEEecCCCChhheecccc-
Confidence 36799999988 58999999999 9999999999755431 1237899999999999999998663
Q ss_pred CCcccCccEEEEECC-EEEEEcCcCCC---------------------------------CCccCcEEEEEccCCceEEE
Q 002713 96 PPSPRAAHAAAAVGT-MVVFQGGIGPA---------------------------------GHSTDDLYVLDLTNDKFKWH 141 (889)
Q Consensus 96 ~P~~R~~haa~~~~~-~Iyv~GG~~~~---------------------------------~~~~~dv~~yD~~t~~~~W~ 141 (889)
|..-.+|+++.+++ +|+++||++.. .....+++.||+.++. |+
T Consensus 133 -P~gl~G~~~~~~~~~~i~f~GGvn~~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy~p~~n~--W~ 209 (381)
T COG3055 133 -PTGLVGASTFSLNGTKIYFFGGVNQNIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSYDPSTNQ--WR 209 (381)
T ss_pred -ccccccceeEecCCceEEEEccccHHhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhcccccccccccccch--hh
Confidence 45678899999887 99999997510 0114688899999955 99
Q ss_pred EEeecC-CCCCCccccEEEEECCcEEEEEecCCC-CcccCcEEEEecCCCCceEEEccCCCCC----CCcccceEEEEec
Q 002713 142 RVVVQG-QGPGPRYGHVMDLVSQRYLVSVSGNDG-KRVLSDAWALDTAQKPYVWQRLNPEGDR----PSARMYATASARS 215 (889)
Q Consensus 142 ~v~~~g-~~p~~R~~hs~~~~~~~~lyv~GG~~~-~~~lndv~~yd~~t~~~~W~~v~~~~~~----P~~r~~~~a~~~~ 215 (889)
.+ | .+..++++++. +..++.+.++-|.-. .-+...++++++..+..+|.+++....+ +..-. .+.....
T Consensus 210 ~~---G~~pf~~~aGsa~-~~~~n~~~lInGEiKpGLRt~~~k~~~~~~~~~~w~~l~~lp~~~~~~~eGvA-Gaf~G~s 284 (381)
T COG3055 210 NL---GENPFYGNAGSAV-VIKGNKLTLINGEIKPGLRTAEVKQADFGGDNLKWLKLSDLPAPIGSNKEGVA-GAFSGKS 284 (381)
T ss_pred hc---CcCcccCccCcce-eecCCeEEEEcceecCCccccceeEEEeccCceeeeeccCCCCCCCCCccccc-eecccee
Confidence 88 6 45567777444 666667777777532 2345678888988776799999654211 11111 1222346
Q ss_pred CCEEEEEccCCCCC------------------CcccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCC
Q 002713 216 DGMFLLCGGRDASG------------------APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGA 277 (889)
Q Consensus 216 ~~~l~v~GG~~~~~------------------~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~ 277 (889)
++.++|.||..-.+ ...+++|.|+. + .|... +..|.+++...++..++.||++||.
T Consensus 285 ~~~~lv~GGAnF~Ga~~~y~~Gk~~AH~Gl~K~w~~~Vy~~d~---g--~Wk~~-GeLp~~l~YG~s~~~nn~vl~IGGE 358 (381)
T COG3055 285 NGEVLVAGGANFPGALKAYKNGKFYAHEGLSKSWNSEVYIFDN---G--SWKIV-GELPQGLAYGVSLSYNNKVLLIGGE 358 (381)
T ss_pred CCeEEEecCCCChhHHHHHHhcccccccchhhhhhceEEEEcC---C--ceeee-cccCCCccceEEEecCCcEEEEccc
Confidence 77899999874321 34578898883 3 45455 4447788888888899999999998
Q ss_pred CCCCCCccCCCcEEEEE
Q 002713 278 LRGGRAIEGEAAVAVLD 294 (889)
Q Consensus 278 ~~~~~~~~~~~~v~~yD 294 (889)
...+.. ...|+.+-
T Consensus 359 ~~~Gka---~~~v~~l~ 372 (381)
T COG3055 359 TSGGKA---TTRVYSLS 372 (381)
T ss_pred cCCCee---eeeEEEEE
Confidence 876654 34454443
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.8e-12 Score=138.77 Aligned_cols=199 Identities=19% Similarity=0.306 Sum_probs=146.1
Q ss_pred eEEEEEeecC-------CCCCCccccEEEEE-CCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCCcccce
Q 002713 138 FKWHRVVVQG-------QGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYA 209 (889)
Q Consensus 138 ~~W~~v~~~g-------~~p~~R~~hs~~~~-~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~ 209 (889)
..|.+++... ..|..|.||-|+.. +++.+|++||++|...+.|.|.|+...+ .|+.+..-+..|..|..|
T Consensus 239 ~~W~~i~~~~~~~~~~~~~p~~RgGHQMV~~~~~~CiYLYGGWdG~~~l~DFW~Y~v~e~--~W~~iN~~t~~PG~RsCH 316 (723)
T KOG2437|consen 239 PRWSQIIPKSTKGDGEDNRPGMRGGHQMVIDVQTECVYLYGGWDGTQDLADFWAYSVKEN--QWTCINRDTEGPGARSCH 316 (723)
T ss_pred ccccccCchhhcccccccCccccCcceEEEeCCCcEEEEecCcccchhHHHHHhhcCCcc--eeEEeecCCCCCcchhhh
Confidence 4588876554 56999999999766 4459999999999999999999999999 999998877789999999
Q ss_pred EEEEe-cCCEEEEEccCCCCC-----CcccceEEEecccCCeeEEEeCC---CCCCCccceeEEEEECCE--EEEEcCCC
Q 002713 210 TASAR-SDGMFLLCGGRDASG-----APLADAYGLLMHRNGQWEWTLAP---GVAPSPRYQHAAVFVGAR--LHVTGGAL 278 (889)
Q Consensus 210 ~a~~~-~~~~l~v~GG~~~~~-----~~~~dv~~l~~~~~~~W~w~~~~---~~~p~~R~~hs~~~~~~~--lyV~GG~~ 278 (889)
-++.- ...+||+.|-+-... ...+|+|.||..++ .|...... .-.|..-+.|.+++.+.+ |||+||+.
T Consensus 317 RMVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~~-~W~~ls~dt~~dGGP~~vfDHqM~Vd~~k~~iyVfGGr~ 395 (723)
T KOG2437|consen 317 RMVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDTN-TWMLLSEDTAADGGPKLVFDHQMCVDSEKHMIYVFGGRI 395 (723)
T ss_pred hhhhhhhHhHHhhhhhccccccccccccccceEEEecCCc-eeEEecccccccCCcceeecceeeEecCcceEEEecCee
Confidence 98854 234899999653221 23679999999877 44433322 124788999999999887 99999985
Q ss_pred CCCCCccCCCcEEEEECCCCeEEeccCCccccCCCCCCCCCCCccCcccccceEEEEE--CCEEEEEcCCCC
Q 002713 279 RGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASI--GVRIYIYGGLKG 348 (889)
Q Consensus 279 ~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~v--~~~lyv~GG~~~ 348 (889)
-... -.....++.||+....|..+..-..... +.. ..-..|-+|++-.. +..+|+|||-..
T Consensus 396 ~~~~-e~~f~GLYaf~~~~~~w~~l~e~~~~~~---~vv-----E~~~sR~ghcmE~~~~n~~ly~fggq~s 458 (723)
T KOG2437|consen 396 LTCN-EPQFSGLYAFNCQCQTWKLLREDSCNAG---PVV-----EDIQSRIGHCMEFHSKNRCLYVFGGQRS 458 (723)
T ss_pred ccCC-CccccceEEEecCCccHHHHHHHHhhcC---cch-----hHHHHHHHHHHHhcCCCCeEEeccCccc
Confidence 4332 1225679999999999987654311100 000 00126777776665 557999999766
|
|
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-09 Score=106.57 Aligned_cols=162 Identities=23% Similarity=0.240 Sum_probs=99.8
Q ss_pred CeEEEecCCCCHHHH---HHHH-HHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHH--HHHhhcCCCcEEEecCCC
Q 002713 586 PVKVFGDLHGQFGDL---MRLF-DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLL--LALKIEYPENVHLIRGNH 659 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l---~~il-~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll--~~lk~~~p~~v~llrGNH 659 (889)
+|+++||+|+..... .+.+ ........+ .+|++||++|+|..+.+..... +..+...+..+++++|||
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPD------FIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTS------EEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCC------EEEeeccccccccccccchhhhccchhhhhcccccccccccc
Confidence 589999999999987 3333 322222223 6899999999999988877765 555666778899999999
Q ss_pred ccchhhhhcCChHHHHHHhCCC------------------------------CchhhhhhhhhhcCCCceEEEEcCeEEE
Q 002713 660 EAADINALFGFRLECIERMGEN------------------------------DGIWAWTRFNQLFNCLPLAALIEKKIIC 709 (889)
Q Consensus 660 E~~~~~~~~gf~~e~~~~~~~~------------------------------~~~~~~~~~~~~f~~LPlaa~i~~~i~~ 709 (889)
|.......+............. ............+.....+......|++
T Consensus 76 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 155 (200)
T PF00149_consen 76 DYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVF 155 (200)
T ss_dssp SSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEE
T ss_pred ccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEE
Confidence 9987655443222221110000 0000001111222222333444557888
Q ss_pred ecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEe
Q 002713 710 MHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRA 789 (889)
Q Consensus 710 vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~ 789 (889)
+|.++.+........ .....+.+.+..++++.++++++-|
T Consensus 156 ~H~p~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~G 195 (200)
T PF00149_consen 156 THHPPYSSSSDSSSY----------------------------------------GNESKGREALEELLKKYNVDLVLSG 195 (200)
T ss_dssp ESSSSSTTSSSTHHH----------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEE
T ss_pred EecCCCCcccccccc----------------------------------------chhhccHHHHHHHHhhCCCCEEEeC
Confidence 888887552211110 0145788999999999999999999
Q ss_pred cccc
Q 002713 790 HECV 793 (889)
Q Consensus 790 H~~~ 793 (889)
|+-.
T Consensus 196 H~H~ 199 (200)
T PF00149_consen 196 HTHR 199 (200)
T ss_dssp SSSS
T ss_pred ceec
Confidence 9853
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.6e-09 Score=103.01 Aligned_cols=147 Identities=35% Similarity=0.502 Sum_probs=118.9
Q ss_pred hhhhhcCChHHHHHHhCCCCchhhhhh---hhhhcCCCceEEEEcC-eEEEecCCCCCCC-cCHHHhhcccCCc--ccCC
Q 002713 663 DINALFGFRLECIERMGENDGIWAWTR---FNQLFNCLPLAALIEK-KIICMHGGIGRSI-HSVEQIEKLERPI--TMDA 735 (889)
Q Consensus 663 ~~~~~~gf~~e~~~~~~~~~~~~~~~~---~~~~f~~LPlaa~i~~-~i~~vHgGi~~~~-~~~~~i~~~~rp~--~~~~ 735 (889)
.++..+++.++|...++.. ..|.. +.++|+.||+.+++++ .++|.|+++++.+ ..+++++.+.|.. .+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~---~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 78 (155)
T COG0639 2 LLTALYGFYDEKLRKYGEE---LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPH 78 (155)
T ss_pred hhhhhhchhHHhhhhcCCc---eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCC
Confidence 4566788888888777543 35666 9999999999999998 9999999999976 6788888887765 4433
Q ss_pred CCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccC
Q 002713 736 GSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYC 815 (889)
Q Consensus 736 ~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~ 815 (889)
.+ ...+.+|++|... ....|.+++||.+. .| .+....|+..+....|.|+|+.+..++...+.+..+|+|++++||
T Consensus 79 ~g-~~~~~~~~~~~~~-~~~~w~~~~~g~~~-~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 79 AG-HTHDLLWSDPDGG-DRRIWNPGPRGVPR-DG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred cc-ccccccCCCCCCC-cccccccCCCCCCc-cc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 44 4566699998752 24678999999983 44 688889998888888999999999999988776899999999997
Q ss_pred C
Q 002713 816 G 816 (889)
Q Consensus 816 ~ 816 (889)
.
T Consensus 155 ~ 155 (155)
T COG0639 155 Y 155 (155)
T ss_pred C
Confidence 3
|
|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-08 Score=79.70 Aligned_cols=50 Identities=38% Similarity=0.767 Sum_probs=42.8
Q ss_pred CcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCccc
Q 002713 29 PRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPR 100 (889)
Q Consensus 29 pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R 100 (889)
||.+|+++++ +++||||||...... .++++++||+.+++|+++++ +|.||
T Consensus 1 pR~~~s~v~~------~~~iyv~GG~~~~~~-------------~~~~v~~yd~~t~~W~~~~~---mp~pR 50 (50)
T PF13964_consen 1 PRYGHSAVVV------GGKIYVFGGYDNSGK-------------YSNDVERYDPETNTWEQLPP---MPTPR 50 (50)
T ss_pred CCccCEEEEE------CCEEEEECCCCCCCC-------------ccccEEEEcCCCCcEEECCC---CCCCC
Confidence 7999999999 899999999986421 58999999999999999984 45666
|
|
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.1e-08 Score=108.19 Aligned_cols=87 Identities=17% Similarity=0.342 Sum_probs=75.0
Q ss_pred CCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccCccEEE
Q 002713 27 PGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAA 106 (889)
Q Consensus 27 P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa~ 106 (889)
+.|+.+|+++++ ++++|||||...... ..+.+|+||..+++|......|..|.||.+|++|
T Consensus 22 ~~~~~~~tav~i------gdk~yv~GG~~d~~~-------------~~~~v~i~D~~t~~W~~P~V~G~~P~~r~GhSa~ 82 (398)
T PLN02772 22 VKPKNRETSVTI------GDKTYVIGGNHEGNT-------------LSIGVQILDKITNNWVSPIVLGTGPKPCKGYSAV 82 (398)
T ss_pred CCCCCcceeEEE------CCEEEEEcccCCCcc-------------ccceEEEEECCCCcEecccccCCCCCCCCcceEE
Confidence 468999999999 999999999754221 4799999999999999999999999999999999
Q ss_pred EEC-CEEEEEcCcCCCCCccCcEEEEEccC
Q 002713 107 AVG-TMVVFQGGIGPAGHSTDDLYVLDLTN 135 (889)
Q Consensus 107 ~~~-~~Iyv~GG~~~~~~~~~dv~~yD~~t 135 (889)
+++ ++|+|+++.++ ..+++|.+...|
T Consensus 83 v~~~~rilv~~~~~~---~~~~~w~l~~~t 109 (398)
T PLN02772 83 VLNKDRILVIKKGSA---PDDSIWFLEVDT 109 (398)
T ss_pred EECCceEEEEeCCCC---CccceEEEEcCC
Confidence 995 69999987543 358899998877
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.4e-07 Score=90.45 Aligned_cols=59 Identities=24% Similarity=0.375 Sum_probs=48.0
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccc
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 662 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 662 (889)
+|.+++|+||++..+.++++.+.. .+ .++++||+++++.... ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d------~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VD------LIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CC------EEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 478999999999999999998754 23 7999999999998765 222 24699999999975
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.5e-08 Score=107.92 Aligned_cols=89 Identities=17% Similarity=0.340 Sum_probs=78.1
Q ss_pred CcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCc
Q 002713 97 PSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR 176 (889)
Q Consensus 97 P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~ 176 (889)
+.++.+|+++++++++||+||..+.+..++.+|+||+.+ ++|....+.|..|.+|.+|+++++++..|+|+++....
T Consensus 22 ~~~~~~~tav~igdk~yv~GG~~d~~~~~~~v~i~D~~t--~~W~~P~V~G~~P~~r~GhSa~v~~~~rilv~~~~~~~- 98 (398)
T PLN02772 22 VKPKNRETSVTIGDKTYVIGGNHEGNTLSIGVQILDKIT--NNWVSPIVLGTGPKPCKGYSAVVLNKDRILVIKKGSAP- 98 (398)
T ss_pred CCCCCcceeEEECCEEEEEcccCCCccccceEEEEECCC--CcEecccccCCCCCCCCcceEEEECCceEEEEeCCCCC-
Confidence 468999999999999999999877666889999999999 55999999999999999999999988899999876543
Q ss_pred ccCcEEEEecCCC
Q 002713 177 VLSDAWALDTAQK 189 (889)
Q Consensus 177 ~lndv~~yd~~t~ 189 (889)
-.++|.+.+.|.
T Consensus 99 -~~~~w~l~~~t~ 110 (398)
T PLN02772 99 -DDSIWFLEVDTP 110 (398)
T ss_pred -ccceEEEEcCCH
Confidence 378999988874
|
|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.1e-08 Score=78.08 Aligned_cols=50 Identities=30% Similarity=0.583 Sum_probs=45.0
Q ss_pred ccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCc
Q 002713 99 PRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (889)
Q Consensus 99 ~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R 153 (889)
||.+|++++++++|||+||.......++++|+||+.+++ |+.+ +++|.+|
T Consensus 1 pR~~~s~v~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~---~~mp~pR 50 (50)
T PF13964_consen 1 PRYGHSAVVVGGKIYVFGGYDNSGKYSNDVERYDPETNT--WEQL---PPMPTPR 50 (50)
T ss_pred CCccCEEEEECCEEEEECCCCCCCCccccEEEEcCCCCc--EEEC---CCCCCCC
Confidence 699999999999999999987657789999999999955 9999 7888887
|
|
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.6e-08 Score=77.43 Aligned_cols=49 Identities=41% Similarity=0.783 Sum_probs=41.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccCccEEEEE
Q 002713 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV 108 (889)
Q Consensus 45 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa~~~ 108 (889)
|++||||||...... ..++|+|+||+.+++|+++ +..|.+|.+|+++++
T Consensus 1 g~~~~vfGG~~~~~~------------~~~nd~~~~~~~~~~W~~~---~~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGG------------TRLNDVWVFDLDTNTWTRI---GDLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCC------------CEecCEEEEECCCCEEEEC---CCCCCCccceEEEEC
Confidence 578999999984222 1689999999999999988 567899999999874
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.9e-08 Score=97.45 Aligned_cols=68 Identities=19% Similarity=0.311 Sum_probs=52.8
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCC--------hHHHHHHHHHHhhcCCCcEEEecC
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH--------SLETITLLLALKIEYPENVHLIRG 657 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~--------s~evl~ll~~lk~~~p~~v~llrG 657 (889)
++.|++|+||++..|.++++.+.....+ .++++||++|+|++ ..+++.+|..+ ...+++++|
T Consensus 2 ri~viSD~Hg~~~~~~~~l~~~~~~~~d------~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~G 71 (182)
T PRK09453 2 KLMFASDTHGSLPATEKALELFAQSGAD------WLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRG 71 (182)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhcCCC------EEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEcc
Confidence 5899999999999999998877433333 79999999999873 45666666543 246999999
Q ss_pred CCccch
Q 002713 658 NHEAAD 663 (889)
Q Consensus 658 NHE~~~ 663 (889)
|||...
T Consensus 72 NhD~~~ 77 (182)
T PRK09453 72 NCDSEV 77 (182)
T ss_pred CCcchh
Confidence 999743
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.3e-07 Score=89.44 Aligned_cols=60 Identities=30% Similarity=0.495 Sum_probs=43.9
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccch
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAAD 663 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 663 (889)
+|.++||+|++...+.++++.+. ..+ .++++||++|+ .+++.++..+ .+++++||||...
T Consensus 2 ki~~~sD~H~~~~~~~~~~~~~~--~~d------~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 2 KIAVISDLHGNLDALEAVLEYIN--EPD------FVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEE--TTTHHHHHHHHHHHT--TES------EEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred EEEEEeCCCCChhHHHHHHHHhc--CCC------EEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 58999999999999999999982 122 68889999993 7777777554 5999999999644
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.54 E-value=2e-07 Score=73.21 Aligned_cols=49 Identities=33% Similarity=0.731 Sum_probs=40.1
Q ss_pred CcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCC
Q 002713 29 PRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAG 94 (889)
Q Consensus 29 pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g 94 (889)
||++|+++++ ++|||||||...... ....+++++||+.+++|+.+++++
T Consensus 1 ~r~~hs~~~~------~~kiyv~GG~~~~~~-----------~~~~~~v~~~d~~t~~W~~~~~~g 49 (49)
T PF07646_consen 1 PRYGHSAVVL------DGKIYVFGGYGTDNG-----------GSSSNDVWVFDTETNQWTELSPMG 49 (49)
T ss_pred CccceEEEEE------CCEEEEECCcccCCC-----------CcccceeEEEECCCCEEeecCCCC
Confidence 6999999999 999999999921111 125899999999999999988653
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.52 E-value=2e-06 Score=85.41 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=46.5
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCC-CCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCcc
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFP-STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEA 661 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~-~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 661 (889)
++.|++|+||++.++..+++..... ..+ .++++||++ +.+++.+|..+. ..++.++||||.
T Consensus 2 ~i~viSD~H~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~ 63 (158)
T TIGR00040 2 KILVISDTHGPLRATELPVELFNLESNVD------LVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDG 63 (158)
T ss_pred EEEEEecccCCcchhHhHHHHHhhccCCC------EEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCc
Confidence 5899999999998777666655443 233 789999999 467777776543 359999999998
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.1e-07 Score=72.05 Aligned_cols=48 Identities=29% Similarity=0.500 Sum_probs=40.0
Q ss_pred ccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEeccCC
Q 002713 258 PRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (889)
Q Consensus 258 ~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~ 306 (889)
+|++|++++++++|||+||+ .........+++++||+++.+|+.+..+
T Consensus 1 ~r~~hs~~~~~~kiyv~GG~-~~~~~~~~~~~v~~~d~~t~~W~~~~~~ 48 (49)
T PF07646_consen 1 PRYGHSAVVLDGKIYVFGGY-GTDNGGSSSNDVWVFDTETNQWTELSPM 48 (49)
T ss_pred CccceEEEEECCEEEEECCc-ccCCCCcccceeEEEECCCCEEeecCCC
Confidence 69999999999999999999 1122233478999999999999998865
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.5e-07 Score=72.60 Aligned_cols=48 Identities=33% Similarity=0.756 Sum_probs=42.2
Q ss_pred CCEEEEEcCcC-CCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEE
Q 002713 109 GTMVVFQGGIG-PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLV 161 (889)
Q Consensus 109 ~~~Iyv~GG~~-~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~ 161 (889)
+++||||||.+ .....++++|+||+.+. +|+++ +++|.+|++|+++++
T Consensus 1 g~~~~vfGG~~~~~~~~~nd~~~~~~~~~--~W~~~---~~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGGTRLNDVWVFDLDTN--TWTRI---GDLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCCCEecCEEEEECCCC--EEEEC---CCCCCCccceEEEEC
Confidence 57899999987 46788999999999985 59988 889999999999864
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-06 Score=91.23 Aligned_cols=113 Identities=20% Similarity=0.215 Sum_probs=72.7
Q ss_pred CeEEEecCCCCHHHHH-HHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchh
Q 002713 586 PVKVFGDLHGQFGDLM-RLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~-~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
+|.++|||||++.... +.++..+ + + .+||+||+++. +.+++..|..+ +..++.++||||.+..
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~~--p-D------~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLLQ--P-D------LVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYD 65 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhccC--C-C------EEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCccccc
Confidence 5899999999987642 3343332 2 2 78999999864 56777766554 2458999999997542
Q ss_pred hh---hcC-----------------------------------------C-hHHHHHHhCCCCchhhhhhhhhhcCCCce
Q 002713 665 NA---LFG-----------------------------------------F-RLECIERMGENDGIWAWTRFNQLFNCLPL 699 (889)
Q Consensus 665 ~~---~~g-----------------------------------------f-~~e~~~~~~~~~~~~~~~~~~~~f~~LPl 699 (889)
.. .+. + ..++...|+ ....++.+..+++.++.
T Consensus 66 ~~~~~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fg---i~s~~eA~~~ive~~~~ 142 (238)
T cd07397 66 ATFRKKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYG---VISLEESAQRIIAAAKK 142 (238)
T ss_pred ccccchHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhC---CCCHHHHHHHHHHHhhh
Confidence 20 000 0 124555554 22455677777888864
Q ss_pred EEEEcCeEEEecCCCCCC
Q 002713 700 AALIEKKIICMHGGIGRS 717 (889)
Q Consensus 700 aa~i~~~i~~vHgGi~~~ 717 (889)
+......||+.|+++.-.
T Consensus 143 ~~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 143 APPDLPLILLAHNGPSGL 160 (238)
T ss_pred cCCCCCeEEEeCcCCcCC
Confidence 444445799999998644
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.8e-05 Score=82.28 Aligned_cols=163 Identities=15% Similarity=0.235 Sum_probs=100.6
Q ss_pred EEEEEcCcCCCCCccCcEEEEEccCCc------eEEEEEeecCCCCCCccccEEEEE---CCcEEEEEecCCC----C--
Q 002713 111 MVVFQGGIGPAGHSTDDLYVLDLTNDK------FKWHRVVVQGQGPGPRYGHVMDLV---SQRYLVSVSGNDG----K-- 175 (889)
Q Consensus 111 ~Iyv~GG~~~~~~~~~dv~~yD~~t~~------~~W~~v~~~g~~p~~R~~hs~~~~---~~~~lyv~GG~~~----~-- 175 (889)
..+|.||.++++..++.+|++...+.. ....+-...|+.|.+||+|++.++ +....++|||+.- .
T Consensus 40 ~YlIHGGrTPNNElS~~LY~ls~~s~~cNkK~tl~C~EKeLvGdvP~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRT 119 (337)
T PF03089_consen 40 QYLIHGGRTPNNELSSSLYILSVDSRGCNKKVTLCCQEKELVGDVPEARYGHTINVVHSRGKTACVLFGGRSYMPPGQRT 119 (337)
T ss_pred eEEecCCcCCCcccccceEEEEeecCCCCceeEEEEecceecCCCCcccccceEEEEEECCcEEEEEECCcccCCccccc
Confidence 677889999999999999998876532 334443456999999999999888 4558899999742 1
Q ss_pred --------cccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCC-CcccceEEEecccC---
Q 002713 176 --------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASG-APLADAYGLLMHRN--- 243 (889)
Q Consensus 176 --------~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~-~~~~dv~~l~~~~~--- 243 (889)
.+...|+.+|++-+ ..+.- ...+.-....+|.+.+ .++.+|++||..-.. .....++++...--
T Consensus 120 TenWNsVvDC~P~VfLiDleFG--C~tah-~lpEl~dG~SFHvsla-r~D~VYilGGHsl~sd~Rpp~l~rlkVdLllGS 195 (337)
T PF03089_consen 120 TENWNSVVDCPPQVFLIDLEFG--CCTAH-TLPELQDGQSFHVSLA-RNDCVYILGGHSLESDSRPPRLYRLKVDLLLGS 195 (337)
T ss_pred hhhcceeccCCCeEEEEecccc--ccccc-cchhhcCCeEEEEEEe-cCceEEEEccEEccCCCCCCcEEEEEEeecCCC
Confidence 23457888888776 44332 2233334566666665 566999999974432 22345666554311
Q ss_pred CeeEEEeCCCCCCCccceeEEEEE---CCEEEEEcCCCCCC
Q 002713 244 GQWEWTLAPGVAPSPRYQHAAVFV---GARLHVTGGALRGG 281 (889)
Q Consensus 244 ~~W~w~~~~~~~p~~R~~hs~~~~---~~~lyV~GG~~~~~ 281 (889)
..-+-..+ +....-.+|.+. .+..+|+||+....
T Consensus 196 P~vsC~vl----~~glSisSAIvt~~~~~e~iIlGGY~sds 232 (337)
T PF03089_consen 196 PAVSCTVL----QGGLSISSAIVTQTGPHEYIILGGYQSDS 232 (337)
T ss_pred ceeEEEEC----CCCceEeeeeEeecCCCceEEEecccccc
Confidence 00011111 112222222222 46788999996544
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.6e-06 Score=83.61 Aligned_cols=118 Identities=21% Similarity=0.263 Sum_probs=76.6
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChH--HHHHHHHHHhhcCCCcEEEecCCCccch
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL--ETITLLLALKIEYPENVHLIRGNHEAAD 663 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~--evl~ll~~lk~~~p~~v~llrGNHE~~~ 663 (889)
+|.+++|+||++. .+ .....+ .+|++||++++|...- +.+.++..++ . ..++++.||||...
T Consensus 1 ~i~~isD~H~~~~----~~---~~~~~D------~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~ 64 (135)
T cd07379 1 RFVCISDTHSRHR----TI---SIPDGD------VLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTL 64 (135)
T ss_pred CEEEEeCCCCCCC----cC---cCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcC
Confidence 4789999999987 11 112222 6888999999986532 2344443332 1 23678999999631
Q ss_pred hhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhcc
Q 002713 664 INALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDL 743 (889)
Q Consensus 664 ~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dl 743 (889)
. .-+.+++++||.+.... +.
T Consensus 65 ~-------------------------------------~~~~~ilv~H~~p~~~~-----------------------~~ 84 (135)
T cd07379 65 D-------------------------------------PEDTDILVTHGPPYGHL-----------------------DL 84 (135)
T ss_pred C-------------------------------------CCCCEEEEECCCCCcCc-----------------------cc
Confidence 1 01236999999542110 00
Q ss_pred ccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceE
Q 002713 744 LWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFE 798 (889)
Q Consensus 744 lWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 798 (889)
++ + . ..+|.+.+.+++++.+.+++|-||.-.+.|++
T Consensus 85 ~~--~----------------~-~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 85 VS--S----------------G-QRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred cc--c----------------C-cccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 00 0 0 23577889999999999999999999988876
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.2e-06 Score=88.40 Aligned_cols=70 Identities=13% Similarity=0.166 Sum_probs=55.4
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccc
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 662 (889)
Q Consensus 586 ~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 662 (889)
+|.+++||||++..|.++++...-...+ .+|++||++++|...-++..++..|... +..+++++||||..
T Consensus 6 kIl~iSDiHgn~~~le~l~~~~~~~~~D------~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 6 YVLATSNPKGDLEALEKLVGLAPETGAD------AIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred EEEEEEecCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 5999999999999999999876432233 7899999999997776777777666432 34699999999975
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.6e-07 Score=71.65 Aligned_cols=46 Identities=30% Similarity=0.647 Sum_probs=30.9
Q ss_pred CccccEEEEECCcEEEEEecCCCC-cccCcEEEEecCCCCceEEEccCC
Q 002713 152 PRYGHVMDLVSQRYLVSVSGNDGK-RVLSDAWALDTAQKPYVWQRLNPE 199 (889)
Q Consensus 152 ~R~~hs~~~~~~~~lyv~GG~~~~-~~lndv~~yd~~t~~~~W~~v~~~ 199 (889)
+|++|+++.+.++.+|||||.+.. ..++++|+||+.++ +|++++++
T Consensus 1 pR~~h~~~~~~~~~i~v~GG~~~~~~~~~d~~~~d~~~~--~W~~~~~~ 47 (49)
T PF13418_consen 1 PRYGHSAVSIGDNSIYVFGGRDSSGSPLNDLWIFDIETN--TWTRLPSM 47 (49)
T ss_dssp --BS-EEEEE-TTEEEEE--EEE-TEE---EEEEETTTT--EEEE--SS
T ss_pred CcceEEEEEEeCCeEEEECCCCCCCcccCCEEEEECCCC--EEEECCCC
Confidence 699999999977799999999876 68999999999999 99999543
|
|
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.1e-07 Score=70.03 Aligned_cols=46 Identities=33% Similarity=0.499 Sum_probs=39.8
Q ss_pred ccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCeEEeccCC
Q 002713 258 PRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (889)
Q Consensus 258 ~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~ 306 (889)
||+.|++++++++|||+||.... ....+++++||+.+++|+.++.+
T Consensus 1 pR~~~~~~~~~~~iyv~GG~~~~---~~~~~~v~~yd~~~~~W~~~~~m 46 (47)
T PF01344_consen 1 PRSGHAAVVVGNKIYVIGGYDGN---NQPTNSVEVYDPETNTWEELPPM 46 (47)
T ss_dssp -BBSEEEEEETTEEEEEEEBEST---SSBEEEEEEEETTTTEEEEEEEE
T ss_pred CCccCEEEEECCEEEEEeeeccc---CceeeeEEEEeCCCCEEEEcCCC
Confidence 68999999999999999998762 22378999999999999998876
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.34 E-value=4.9e-07 Score=70.91 Aligned_cols=47 Identities=30% Similarity=0.716 Sum_probs=30.3
Q ss_pred ccCccEEEEEC-CEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCC
Q 002713 99 PRAAHAAAAVG-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (889)
Q Consensus 99 ~R~~haa~~~~-~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p 150 (889)
||++|+++.++ ++||||||.+..+..++++|+||+.+++ |+++ +++|
T Consensus 1 pR~~h~~~~~~~~~i~v~GG~~~~~~~~~d~~~~d~~~~~--W~~~---~~~P 48 (49)
T PF13418_consen 1 PRYGHSAVSIGDNSIYVFGGRDSSGSPLNDLWIFDIETNT--WTRL---PSMP 48 (49)
T ss_dssp --BS-EEEEE-TTEEEEE--EEE-TEE---EEEEETTTTE--EEE-----SS-
T ss_pred CcceEEEEEEeCCeEEEECCCCCCCcccCCEEEEECCCCE--EEEC---CCCC
Confidence 69999999995 8999999998777899999999999955 9998 5555
|
|
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.33 E-value=9.5e-07 Score=66.86 Aligned_cols=40 Identities=43% Similarity=0.696 Sum_probs=36.3
Q ss_pred CCcccCccEEEEECCEEEEEcCcC-CCCCccCcEEEEEccC
Q 002713 96 PPSPRAAHAAAAVGTMVVFQGGIG-PAGHSTDDLYVLDLTN 135 (889)
Q Consensus 96 ~P~~R~~haa~~~~~~Iyv~GG~~-~~~~~~~dv~~yD~~t 135 (889)
+|.+|++|++++++++||++||.. .....++|+|+||+.+
T Consensus 1 ~P~~R~~hs~~~~~~~iyi~GG~~~~~~~~~~d~~~l~l~s 41 (42)
T PF13854_consen 1 IPSPRYGHSAVVVGNNIYIFGGYSGNNNSYSNDLYVLDLPS 41 (42)
T ss_pred CCCCccceEEEEECCEEEEEcCccCCCCCEECcEEEEECCC
Confidence 478999999999999999999998 3678899999999976
|
|
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.28 E-value=8e-07 Score=68.93 Aligned_cols=44 Identities=30% Similarity=0.567 Sum_probs=39.4
Q ss_pred ccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEe
Q 002713 99 PRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVV 144 (889)
Q Consensus 99 ~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~ 144 (889)
||++|++++++++||++||.......++++++||+.+++ |+.+.
T Consensus 1 pR~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~ 44 (47)
T PF01344_consen 1 PRSGHAAVVVGNKIYVIGGYDGNNQPTNSVEVYDPETNT--WEELP 44 (47)
T ss_dssp -BBSEEEEEETTEEEEEEEBESTSSBEEEEEEEETTTTE--EEEEE
T ss_pred CCccCEEEEECCEEEEEeeecccCceeeeEEEEeCCCCE--EEEcC
Confidence 699999999999999999998767899999999999965 99983
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.8e-06 Score=77.35 Aligned_cols=117 Identities=23% Similarity=0.347 Sum_probs=82.7
Q ss_pred EEEecCCCCHHHHHHHH--HHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhh
Q 002713 588 KVFGDLHGQFGDLMRLF--DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 665 (889)
Q Consensus 588 ~vvGDiHG~~~~l~~il--~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 665 (889)
+++||+|+......... ........+ .+|++||+++.+....+........+......++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~------~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPD------FVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCC------EEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 47999999999888765 222212222 68899999999998887766644444455677999999999
Q ss_pred hhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhcccc
Q 002713 666 ALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLW 745 (889)
Q Consensus 666 ~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllW 745 (889)
|+++|..+.+.......
T Consensus 70 -----------------------------------------i~~~H~~~~~~~~~~~~---------------------- 86 (131)
T cd00838 70 -----------------------------------------ILLTHGPPYDPLDELSP---------------------- 86 (131)
T ss_pred -----------------------------------------EEEeccCCCCCchhhcc----------------------
Confidence 89999988654210000
Q ss_pred CCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceE
Q 002713 746 SDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFE 798 (889)
Q Consensus 746 sdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 798 (889)
. .......+...+...+.+++|-||.-....+.
T Consensus 87 --~------------------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 87 --D------------------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --c------------------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0 00155778888999999999999998765554
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.7e-06 Score=65.42 Aligned_cols=42 Identities=29% Similarity=0.586 Sum_probs=35.1
Q ss_pred CCCCcccceEEEeccccCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCC
Q 002713 26 APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTR 85 (889)
Q Consensus 26 ~P~pR~ght~~~i~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~ 85 (889)
+|.||.+|+++++ +++||||||...... ...+|+|+||+.++
T Consensus 1 ~P~~R~~hs~~~~------~~~iyi~GG~~~~~~------------~~~~d~~~l~l~sf 42 (42)
T PF13854_consen 1 IPSPRYGHSAVVV------GNNIYIFGGYSGNNN------------SYSNDLYVLDLPSF 42 (42)
T ss_pred CCCCccceEEEEE------CCEEEEEcCccCCCC------------CEECcEEEEECCCC
Confidence 4899999999999 899999999985111 16899999999763
|
|
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00017 Score=75.33 Aligned_cols=182 Identities=17% Similarity=0.250 Sum_probs=105.0
Q ss_pred CCCCcccceEEEeccccCC-CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--------EEEecCCCCC
Q 002713 26 APGPRCGHTLTAVAATKTT-GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--------WTRIRPAGEP 96 (889)
Q Consensus 26 ~P~pR~ght~~~i~~~~~~-~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~--------W~~l~~~g~~ 96 (889)
+|..|+ -+.+.+...... ....++-||.+.++. +.+.+|++.+.+.. .+.-.-.|+.
T Consensus 19 LPPLR~-PAv~~~~~~~~~~~~~YlIHGGrTPNNE-------------lS~~LY~ls~~s~~cNkK~tl~C~EKeLvGdv 84 (337)
T PF03089_consen 19 LPPLRC-PAVCHLSDPSDGEPEQYLIHGGRTPNNE-------------LSSSLYILSVDSRGCNKKVTLCCQEKELVGDV 84 (337)
T ss_pred CCCCCC-ccEeeecCCCCCCeeeEEecCCcCCCcc-------------cccceEEEEeecCCCCceeEEEEecceecCCC
Confidence 455665 334444222222 233456677776553 67889998776532 3333455889
Q ss_pred CcccCccEEEEEC----CEEEEEcCcC--CCCC-----------ccCcEEEEEccCCceEEEEEeecCCCCCCccccEEE
Q 002713 97 PSPRAAHAAAAVG----TMVVFQGGIG--PAGH-----------STDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMD 159 (889)
Q Consensus 97 P~~R~~haa~~~~----~~Iyv~GG~~--~~~~-----------~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~ 159 (889)
|.+|++|++.++. ..+++|||.+ +.+. +...+|.+|+.-.-.+=+.+ ......-.+|.+.
T Consensus 85 P~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRTTenWNsVvDC~P~VfLiDleFGC~tah~l---pEl~dG~SFHvsl 161 (337)
T PF03089_consen 85 PEARYGHTINVVHSRGKTACVLFGGRSYMPPGQRTTENWNSVVDCPPQVFLIDLEFGCCTAHTL---PELQDGQSFHVSL 161 (337)
T ss_pred CcccccceEEEEEECCcEEEEEECCcccCCccccchhhcceeccCCCeEEEEeccccccccccc---hhhcCCeEEEEEE
Confidence 9999999998883 3789999975 2111 22457788887532112222 4556677888887
Q ss_pred EECCcEEEEEecCCC--CcccCcEEEEecCC---CCceEEEccCCCCCCCcccceEEEE--ecCCEEEEEccCCCCCC
Q 002713 160 LVSQRYLVSVSGNDG--KRVLSDAWALDTAQ---KPYVWQRLNPEGDRPSARMYATASA--RSDGMFLLCGGRDASGA 230 (889)
Q Consensus 160 ~~~~~~lyv~GG~~~--~~~lndv~~yd~~t---~~~~W~~v~~~~~~P~~r~~~~a~~--~~~~~l~v~GG~~~~~~ 230 (889)
...| .+|++||..- +..-..++++.++- .| +-.+... +......+|.+ .....++|.||+..+.+
T Consensus 162 ar~D-~VYilGGHsl~sd~Rpp~l~rlkVdLllGSP--~vsC~vl---~~glSisSAIvt~~~~~e~iIlGGY~sdsQ 233 (337)
T PF03089_consen 162 ARND-CVYILGGHSLESDSRPPRLYRLKVDLLLGSP--AVSCTVL---QGGLSISSAIVTQTGPHEYIILGGYQSDSQ 233 (337)
T ss_pred ecCc-eEEEEccEEccCCCCCCcEEEEEEeecCCCc--eeEEEEC---CCCceEeeeeEeecCCCceEEEecccccce
Confidence 7776 8999999743 33445566654332 11 1111111 12222333332 24568899999977653
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00012 Score=74.22 Aligned_cols=58 Identities=28% Similarity=0.446 Sum_probs=41.9
Q ss_pred CeEEEecCC-CCHH-----HHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCC
Q 002713 586 PVKVFGDLH-GQFG-----DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNH 659 (889)
Q Consensus 586 ~i~vvGDiH-G~~~-----~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 659 (889)
.|.||+|+| |.-. .+.++++. ...+ .++.+||+++ .+++.+|..++ ..++.++|||
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d------~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~ 62 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQ------HVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDF 62 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCC------EEEECCCCCC-----HHHHHHHHhhC----CceEEEECCC
Confidence 478999999 6543 35666654 1122 7899999987 77777776653 2599999999
Q ss_pred cc
Q 002713 660 EA 661 (889)
Q Consensus 660 E~ 661 (889)
|.
T Consensus 63 D~ 64 (178)
T cd07394 63 DE 64 (178)
T ss_pred Cc
Confidence 97
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00014 Score=76.57 Aligned_cols=152 Identities=14% Similarity=0.225 Sum_probs=98.0
Q ss_pred EEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCcccCcEEEEecCC----CCceEEEccCCCCCC
Q 002713 128 LYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ----KPYVWQRLNPEGDRP 203 (889)
Q Consensus 128 v~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t----~~~~W~~v~~~~~~P 203 (889)
...||+.+++ ++.+.+ ..--...+.+...++.+++.||.... ...+-.|++.+ . .|.+.... +-
T Consensus 48 s~~yD~~tn~--~rpl~v----~td~FCSgg~~L~dG~ll~tGG~~~G--~~~ir~~~p~~~~~~~--~w~e~~~~--m~ 115 (243)
T PF07250_consen 48 SVEYDPNTNT--FRPLTV----QTDTFCSGGAFLPDGRLLQTGGDNDG--NKAIRIFTPCTSDGTC--DWTESPND--MQ 115 (243)
T ss_pred EEEEecCCCc--EEeccC----CCCCcccCcCCCCCCCEEEeCCCCcc--ccceEEEecCCCCCCC--CceECccc--cc
Confidence 4579999955 777733 33334444456678889999998542 23456677654 3 68877542 45
Q ss_pred CcccceEEEEecCCEEEEEccCCCCCCcccceEEEeccc---CCeeEEEeCCC---CCCCccceeEEEEECCEEEEEcCC
Q 002713 204 SARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHR---NGQWEWTLAPG---VAPSPRYQHAAVFVGARLHVTGGA 277 (889)
Q Consensus 204 ~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~---~~~W~w~~~~~---~~p~~R~~hs~~~~~~~lyV~GG~ 277 (889)
.+|.|.++....||+++|+||... ..+.|.+.. ...+.|..+.. ..+..-|=+....-+++||+++..
T Consensus 116 ~~RWYpT~~~L~DG~vlIvGG~~~------~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~ 189 (243)
T PF07250_consen 116 SGRWYPTATTLPDGRVLIVGGSNN------PTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR 189 (243)
T ss_pred CCCccccceECCCCCEEEEeCcCC------CcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC
Confidence 889999999999999999999862 234444432 12233322221 122333434444459999999873
Q ss_pred CCCCCCccCCCcEEEEECCCCeE-EeccCCcc
Q 002713 278 LRGGRAIEGEAAVAVLDTAAGVW-LDRNGLVT 308 (889)
Q Consensus 278 ~~~~~~~~~~~~v~~yD~~t~~W-~~v~~~~~ 308 (889)
.-.+||..++++ ++++.++.
T Consensus 190 -----------~s~i~d~~~n~v~~~lP~lPg 210 (243)
T PF07250_consen 190 -----------GSIIYDYKTNTVVRTLPDLPG 210 (243)
T ss_pred -----------CcEEEeCCCCeEEeeCCCCCC
Confidence 356889999977 78887755
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.2e-05 Score=61.76 Aligned_cols=47 Identities=32% Similarity=0.600 Sum_probs=38.6
Q ss_pred EEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccCccEEEEECC
Q 002713 47 RLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGT 110 (889)
Q Consensus 47 ~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa~~~~~ 110 (889)
+|||+||..... .++++++||+.+++|+.++ ++|.+|..|+++++++
T Consensus 1 ~iyv~GG~~~~~--------------~~~~v~~yd~~~~~W~~~~---~~~~~r~~~~~~~~~g 47 (47)
T smart00612 1 KIYVVGGFDGGQ--------------RLKSVEVYDPETNKWTPLP---SMPTPRSGHGVAVING 47 (47)
T ss_pred CEEEEeCCCCCc--------------eeeeEEEECCCCCeEccCC---CCCCccccceEEEeCC
Confidence 489999985421 4789999999999999877 4568999999988764
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00084 Score=70.81 Aligned_cols=161 Identities=13% Similarity=0.183 Sum_probs=98.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccC--CceEEEEEeecCCCCCC
Q 002713 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTN--DKFKWHRVVVQGQGPGP 152 (889)
Q Consensus 75 ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t--~~~~W~~v~~~g~~p~~ 152 (889)
..-..||+.+++++.+....+ .-.++|+ ..-++.+++.||... -...+-.|++.+ ....|.+.. ..+..+
T Consensus 46 a~s~~yD~~tn~~rpl~v~td--~FCSgg~-~L~dG~ll~tGG~~~---G~~~ir~~~p~~~~~~~~w~e~~--~~m~~~ 117 (243)
T PF07250_consen 46 AHSVEYDPNTNTFRPLTVQTD--TFCSGGA-FLPDGRLLQTGGDND---GNKAIRIFTPCTSDGTCDWTESP--NDMQSG 117 (243)
T ss_pred EEEEEEecCCCcEEeccCCCC--CcccCcC-CCCCCCEEEeCCCCc---cccceEEEecCCCCCCCCceECc--ccccCC
Confidence 345679999999998875432 2233333 223578999999754 334566777764 123487763 348999
Q ss_pred ccccEEEEECCcEEEEEecCCCCcccCcEEEEecC----CCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCC
Q 002713 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTA----QKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS 228 (889)
Q Consensus 153 R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~----t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~ 228 (889)
|.+.++..+.++.++|+||... ..+.|-+. ...+.|..+......-..-.|-.+.+..+|+|++++..
T Consensus 118 RWYpT~~~L~DG~vlIvGG~~~-----~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~--- 189 (243)
T PF07250_consen 118 RWYPTATTLPDGRVLIVGGSNN-----PTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR--- 189 (243)
T ss_pred CccccceECCCCCEEEEeCcCC-----CcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC---
Confidence 9999999999999999999873 22333332 12234433332211112233556677889999999974
Q ss_pred CCcccceEEEecccCCeeEE-EeCCCCCCCcc
Q 002713 229 GAPLADAYGLLMHRNGQWEW-TLAPGVAPSPR 259 (889)
Q Consensus 229 ~~~~~dv~~l~~~~~~~W~w-~~~~~~~p~~R 259 (889)
+...||...+ ++ ...+..+-.+|
T Consensus 190 -----~s~i~d~~~n---~v~~~lP~lPg~~R 213 (243)
T PF07250_consen 190 -----GSIIYDYKTN---TVVRTLPDLPGGPR 213 (243)
T ss_pred -----CcEEEeCCCC---eEEeeCCCCCCCce
Confidence 2345566655 44 34444432334
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00025 Score=67.86 Aligned_cols=56 Identities=20% Similarity=0.146 Sum_probs=39.5
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCc
Q 002713 588 KVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 660 (889)
Q Consensus 588 ~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 660 (889)
.|++|.||..+.+.++.... ...+ .++++||+. .+++.++..++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~~--~~~d------~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL--EGVD------LILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhhC--CCCC------EEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 38999999988777766652 2222 799999984 34555655542 234899999999
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.71 E-value=6.4e-05 Score=76.36 Aligned_cols=65 Identities=23% Similarity=0.307 Sum_probs=44.3
Q ss_pred eEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCCh-HHHHHHHHHHhhcCCCcEEEecCCCccch
Q 002713 587 VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS-LETITLLLALKIEYPENVHLIRGNHEAAD 663 (889)
Q Consensus 587 i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s-~evl~ll~~lk~~~p~~v~llrGNHE~~~ 663 (889)
|.+++||||++..+.. ........+ -+|+.||++++|... .+.+..|.. .+..++.+.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEAD------AVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCC------EEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 5789999999998876 222212222 688999999999763 333333322 3455999999999754
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=97.68 E-value=6.8e-05 Score=57.55 Aligned_cols=45 Identities=22% Similarity=0.302 Sum_probs=38.0
Q ss_pred EEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEe
Q 002713 165 YLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASAR 214 (889)
Q Consensus 165 ~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~ 214 (889)
+||++||.++...++++++||+.++ +|+.++++ |.+|..|+++++
T Consensus 1 ~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~---~~~r~~~~~~~~ 45 (47)
T smart00612 1 KIYVVGGFDGGQRLKSVEVYDPETN--KWTPLPSM---PTPRSGHGVAVI 45 (47)
T ss_pred CEEEEeCCCCCceeeeEEEECCCCC--eEccCCCC---CCccccceEEEe
Confidence 3899999987777999999999999 99998765 788888877654
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.63 E-value=1.1e-05 Score=90.24 Aligned_cols=243 Identities=11% Similarity=-0.000 Sum_probs=162.4
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceEeecC----CeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCC
Q 002713 557 FLDSYEVGELCYAAEQIFMQEPTVLQLRA----PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ 632 (889)
Q Consensus 557 ~~~~~~~~~l~~~~~~~~~~e~~~l~~~~----~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~ 632 (889)
.|...++..+++.+.+++..+|+...+.+ -.+.++|.||.+.|+.+.++.- |.-. .-|++-|++++++.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~-----K~Y~rrg~a~m~l~ 86 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYI-----KAYVRRGTAVMALG 86 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhh-----heeeeccHHHHhHH
Confidence 56778899999999999999998887643 4889999999999999988764 2211 15999999999999
Q ss_pred ChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEEcCeEEEecC
Q 002713 633 HSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 712 (889)
Q Consensus 633 ~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHg 712 (889)
...+.+..|...+...|+...+.|++||+..+-..++|..+....+++. +..++..+...+-.+ +++.+.+.++=-|
T Consensus 87 ~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~-~s~~~~~~~~~~~~~-i~~~y~g~~le~~- 163 (476)
T KOG0376|consen 87 EFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDK-KSVVEMKIDEEDMDL-IESDYSGPVLEDH- 163 (476)
T ss_pred HHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCC-ccccccccccccccc-cccccCCcccccc-
Confidence 9999999999999999999999999999999999999998887777554 223333333332221 5555554333222
Q ss_pred CCCC--------------CCc-----C-HHHh----hcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCceEE
Q 002713 713 GIGR--------------SIH-----S-VEQI----EKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVT 768 (889)
Q Consensus 713 Gi~~--------------~~~-----~-~~~i----~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~ 768 (889)
-+.- .+. + +++. +.+..++++. .-.|..|+++... -..|-...|+.+ ..
T Consensus 164 kvt~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~----~~~d~~~sv~gd~--hGqfydl~nif~-l~ 236 (476)
T KOG0376|consen 164 KVTLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEIS----VPGDVKISVCGDT--HGQFYDLLNIFE-LN 236 (476)
T ss_pred hhhHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEee----cCCCceEEecCCc--cccccchhhhHh-hc
Confidence 1100 000 0 0111 1111122211 3456788888642 222333455555 34
Q ss_pred eCHHHHHHHHHhcCCeEEEEecccc-----------cc-ceEEec---CCeEEEEecccccCC
Q 002713 769 FGPDRVSDFCKRNKLQLIIRAHECV-----------MD-GFERFA---QGQLITLFSATNYCG 816 (889)
Q Consensus 769 fg~~~~~~fl~~~~l~~iiR~H~~~-----------~~-G~~~~~---~~~~itvfSa~~y~~ 816 (889)
.+++....||.+.++.-+++.|.-+ ++ +|.... .+.++++|+++.+|-
T Consensus 237 g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 237 GLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred CCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 5777778888888888888888654 12 222111 235899999998874
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0002 Score=76.33 Aligned_cols=206 Identities=18% Similarity=0.238 Sum_probs=102.9
Q ss_pred CeEEEecCCCCH------HHHHHHHHHhCCCCCCCCcceeeEEEeccccCC--C-----CChHHHHHHHHHHhhcCCCcE
Q 002713 586 PVKVFGDLHGQF------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDR--G-----QHSLETITLLLALKIEYPENV 652 (889)
Q Consensus 586 ~i~vvGDiHG~~------~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDR--G-----~~s~evl~ll~~lk~~~p~~v 652 (889)
++++++|+|... ..|+++|+..... .+ .++++||++|. | +...+++.+|..|+.. +-.+
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~-~d------~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v 73 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRGEARQ-AD------ALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPC 73 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHhhhcc-CC------EEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeE
Confidence 689999999542 3455555432211 12 68899999985 2 3346777777777643 2469
Q ss_pred EEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEEc-CeEEEecCCCCCCCcCH-HHhhcccC-
Q 002713 653 HLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIE-KKIICMHGGIGRSIHSV-EQIEKLER- 729 (889)
Q Consensus 653 ~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~-~~i~~vHgGi~~~~~~~-~~i~~~~r- 729 (889)
++++||||..... ...+..+ . .++.. |....++ .+++++||-.-+..... ...+++-|
T Consensus 74 ~~v~GNHD~~~~~-------~~~~~~g----~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~ 134 (241)
T PRK05340 74 YFMHGNRDFLLGK-------RFAKAAG----M-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRN 134 (241)
T ss_pred EEEeCCCchhhhH-------HHHHhCC----C-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhC
Confidence 9999999974321 1111111 1 11211 2333344 47999999876532111 11222211
Q ss_pred CcccCCCCchhhccccCCCCCC-CC-CCCcc-----cCC-CCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEec
Q 002713 730 PITMDAGSIILMDLLWSDPTEN-DS-IEGLR-----PNA-RGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFA 801 (889)
Q Consensus 730 p~~~~~~~~~~~dllWsdP~~~-~~-~~~~~-----~n~-rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~ 801 (889)
|.- ..-++. -|... -. ...+. .+. +..-.....++.+.+.+++.+.+++|-||.-.+.=.....
T Consensus 135 ~~~-------~~~~~~-~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~ 206 (241)
T PRK05340 135 PWL-------QWLFLA-LPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQA 206 (241)
T ss_pred HHH-------HHHHHh-CCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccC
Confidence 110 000000 01000 00 00000 001 1111233567888899999999999999997644333322
Q ss_pred CCeEEEEecccccCCCCCCeEEEEEEcCC
Q 002713 802 QGQLITLFSATNYCGTANNAGAILVVGRG 830 (889)
Q Consensus 802 ~~~~itvfSa~~y~~~~~n~ga~l~~~~~ 830 (889)
++.-++-.+-.+. ...+.++.++.+
T Consensus 207 ~~~~~~~~~lgdw----~~~~~~~~~~~~ 231 (241)
T PRK05340 207 GGQPATRIVLGDW----HEQGSVLKVDAD 231 (241)
T ss_pred CCcceEEEEeCCC----CCCCeEEEEECC
Confidence 3311222222222 223677777765
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00028 Score=74.66 Aligned_cols=206 Identities=15% Similarity=0.192 Sum_probs=101.0
Q ss_pred eEEEecCCCCH------HHHHHHHHHhCCCCCCCCcceeeEEEeccccCCC--C---C--hHHHHHHHHHHhhcCCCcEE
Q 002713 587 VKVFGDLHGQF------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRG--Q---H--SLETITLLLALKIEYPENVH 653 (889)
Q Consensus 587 i~vvGDiHG~~------~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG--~---~--s~evl~ll~~lk~~~p~~v~ 653 (889)
+++++|+|... ..|++.+...... .+ .++++||++|.. . . ..++..+|..|+.. +..++
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~~-~d------~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~ 72 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEARK-AD------ALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCY 72 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhcc-CC------EEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEE
Confidence 36899999542 2455555443221 22 688999999952 1 1 23556666666543 45699
Q ss_pred EecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEE-cCeEEEecCCCCCCCc-CHHHhhcc-cCC
Q 002713 654 LIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALI-EKKIICMHGGIGRSIH-SVEQIEKL-ERP 730 (889)
Q Consensus 654 llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i-~~~i~~vHgGi~~~~~-~~~~i~~~-~rp 730 (889)
++.||||...-. ...+.. +. .++.. +....+ +.+++++||-.-..-. ...-.+++ ..|
T Consensus 73 ~v~GNHD~~~~~-------~~~~~~----gi-------~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~ 133 (231)
T TIGR01854 73 FMHGNRDFLIGK-------RFAREA----GM-------TLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQP 133 (231)
T ss_pred EEcCCCchhhhH-------HHHHHC----CC-------EEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCH
Confidence 999999974211 001111 11 12222 222233 4689999997643111 11111221 112
Q ss_pred cc------cCC-CCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEecCC
Q 002713 731 IT------MDA-GSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQG 803 (889)
Q Consensus 731 ~~------~~~-~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~ 803 (889)
.. ++. ....+...+++..... .. .+..-.....++.+++++++.+.+++|-||.-.+.=+.+..++
T Consensus 134 ~~~~~~~~l~~~~r~~l~~~~~~~s~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~ 206 (231)
T TIGR01854 134 WLQRLFLHLPLAVRVKLARKIRAESRAD---KQ----MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADG 206 (231)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHh---cC----CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCC
Confidence 10 000 0011223333322110 00 0001123356788999999999999999999765434333333
Q ss_pred eEEEEecccccCCCCCCeEEEEEEcCC
Q 002713 804 QLITLFSATNYCGTANNAGAILVVGRG 830 (889)
Q Consensus 804 ~~itvfSa~~y~~~~~n~ga~l~~~~~ 830 (889)
.-++-..-.+.. ..+.+++++++
T Consensus 207 ~~~~~~~lgdW~----~~~~~~~~~~~ 229 (231)
T TIGR01854 207 QPATRIVLGDWY----RQGSILRVDAD 229 (231)
T ss_pred CccEEEEECCCc----cCCeEEEEcCC
Confidence 222333333332 22455666543
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0032 Score=65.86 Aligned_cols=71 Identities=13% Similarity=0.126 Sum_probs=40.5
Q ss_pred eCHHHHHHHHHhc-CCeEEEEeccccccceEEe-----cCCeEEEEecccccCCCCCCe-EEEEEEcCC-ceEEeEEecc
Q 002713 769 FGPDRVSDFCKRN-KLQLIIRAHECVMDGFERF-----AQGQLITLFSATNYCGTANNA-GAILVVGRG-LVVVPKLIHP 840 (889)
Q Consensus 769 fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~-----~~~~~itvfSa~~y~~~~~n~-ga~l~~~~~-~~~~~~~~~~ 840 (889)
.+...+.+.++++ ++++++-||.-. .+.... .++.+..+++....-...+|. =.++.++++ .+|.++.+.|
T Consensus 135 ~~~~~~~~ll~~~~~V~~v~~GH~H~-~~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 135 DGQQIWDKLVKKNDNVFMVLSGHVHG-AGRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred cHHHHHHHHHhCCCCEEEEEccccCC-CceEEEcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCEEEEEeCCC
Confidence 3566788899988 899999999654 344333 134455554432111111221 145555555 4777776655
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0013 Score=63.86 Aligned_cols=29 Identities=10% Similarity=0.094 Sum_probs=23.9
Q ss_pred CHHHHHHHHHhcCCeEEEEeccccccceE
Q 002713 770 GPDRVSDFCKRNKLQLIIRAHECVMDGFE 798 (889)
Q Consensus 770 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 798 (889)
+.+.+.+++++.++++++-||.-....+.
T Consensus 101 ~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 101 DAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 55778899999999999999998755444
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.057 Score=61.88 Aligned_cols=198 Identities=18% Similarity=0.219 Sum_probs=109.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCC--cEEEecCCCC-----CCcccCccEEEEECCEEEEEcC
Q 002713 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTR--KWTRIRPAGE-----PPSPRAAHAAAAVGTMVVFQGG 117 (889)
Q Consensus 45 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~--~W~~l~~~g~-----~P~~R~~haa~~~~~~Iyv~GG 117 (889)
+++||+.+. ...+++||..+. .|+.-..... .+.++...+.++.+++||+.+.
T Consensus 69 ~~~vy~~~~--------------------~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~ 128 (394)
T PRK11138 69 YNKVYAADR--------------------AGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSE 128 (394)
T ss_pred CCEEEEECC--------------------CCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcC
Confidence 788888654 246899998865 5875322100 0012333345667888887643
Q ss_pred cCCCCCccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEcc
Q 002713 118 IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLN 197 (889)
Q Consensus 118 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~ 197 (889)
. ..++++|..+.+..|+.-.. + . . .+.-++.++.+|+..+ + +.++.||.++....|+.-.
T Consensus 129 ~-------g~l~ald~~tG~~~W~~~~~-~----~-~-~ssP~v~~~~v~v~~~-~-----g~l~ald~~tG~~~W~~~~ 188 (394)
T PRK11138 129 K-------GQVYALNAEDGEVAWQTKVA-G----E-A-LSRPVVSDGLVLVHTS-N-----GMLQALNESDGAVKWTVNL 188 (394)
T ss_pred C-------CEEEEEECCCCCCcccccCC-C----c-e-ecCCEEECCEEEEECC-C-----CEEEEEEccCCCEeeeecC
Confidence 2 35999999998888976421 1 1 1 1222333457776432 2 3689999999888898754
Q ss_pred CCCCCCCcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeEEEeCCCCCCC----cc---ceeEEEEECCE
Q 002713 198 PEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPS----PR---YQHAAVFVGAR 270 (889)
Q Consensus 198 ~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~----~R---~~hs~~~~~~~ 270 (889)
.... ...+.. ++-++.++.+|+..+ ...++.++.. +|+-.|......+.. .| ...+-++.++.
T Consensus 189 ~~~~-~~~~~~-~sP~v~~~~v~~~~~-------~g~v~a~d~~-~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~ 258 (394)
T PRK11138 189 DVPS-LTLRGE-SAPATAFGGAIVGGD-------NGRVSAVLME-QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGV 258 (394)
T ss_pred CCCc-ccccCC-CCCEEECCEEEEEcC-------CCEEEEEEcc-CChhhheeccccCCCccchhcccccCCCcEEECCE
Confidence 2100 011111 222334566666432 1236677665 344445432221110 01 11234456899
Q ss_pred EEEEcCCCCCCCCccCCCcEEEEECCCCe--EEe
Q 002713 271 LHVTGGALRGGRAIEGEAAVAVLDTAAGV--WLD 302 (889)
Q Consensus 271 lyV~GG~~~~~~~~~~~~~v~~yD~~t~~--W~~ 302 (889)
+|+.+. ...++.+|+.+.+ |+.
T Consensus 259 vy~~~~----------~g~l~ald~~tG~~~W~~ 282 (394)
T PRK11138 259 VYALAY----------NGNLVALDLRSGQIVWKR 282 (394)
T ss_pred EEEEEc----------CCeEEEEECCCCCEEEee
Confidence 998653 1358999998864 875
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.49 E-value=9.3e-05 Score=73.98 Aligned_cols=67 Identities=27% Similarity=0.231 Sum_probs=45.4
Q ss_pred eEEEecCCCCHHHHHHHHHH-hCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccc
Q 002713 587 VKVFGDLHGQFGDLMRLFDE-YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 662 (889)
Q Consensus 587 i~vvGDiHG~~~~l~~il~~-~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 662 (889)
+.+++|||+....+...+.. ......+ -++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d------~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDAD------ILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCC------EEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 46899999998777665421 1212222 6888999999987765544 2222 23345799999999985
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00031 Score=76.24 Aligned_cols=70 Identities=20% Similarity=0.091 Sum_probs=49.6
Q ss_pred CCeEEEecCCCC----HHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCC--CChHHHHHHHHHHhhcCCCcEEEecCC
Q 002713 585 APVKVFGDLHGQ----FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRG--QHSLETITLLLALKIEYPENVHLIRGN 658 (889)
Q Consensus 585 ~~i~vvGDiHG~----~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG--~~s~evl~ll~~lk~~~p~~v~llrGN 658 (889)
-+|.+++|||.. ...+.++++...-...+ -++++|||+|++ ...-++..+|..|+...| ++.+.||
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pD------lVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GN 121 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPD------LILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGN 121 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCC------EEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCC
Confidence 359999999976 45577777665433333 688899999954 233456667777765544 9999999
Q ss_pred Cccc
Q 002713 659 HEAA 662 (889)
Q Consensus 659 HE~~ 662 (889)
||..
T Consensus 122 HD~~ 125 (271)
T PRK11340 122 HDRP 125 (271)
T ss_pred CCcc
Confidence 9973
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00026 Score=74.28 Aligned_cols=69 Identities=29% Similarity=0.298 Sum_probs=48.8
Q ss_pred CeEEEecCCCCHH----HHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChH-HHHHHHHHHhhcCCCcEEEecCCCc
Q 002713 586 PVKVFGDLHGQFG----DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL-ETITLLLALKIEYPENVHLIRGNHE 660 (889)
Q Consensus 586 ~i~vvGDiHG~~~----~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~-evl~ll~~lk~~~p~~v~llrGNHE 660 (889)
++.+++|+|.... .+.++++...-...+ -+|++||++|.+.... ++..++..++. +..++++.||||
T Consensus 3 ~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d------~vl~~GD~~~~~~~~~~~~~~~l~~l~~--~~~v~~v~GNHD 74 (223)
T cd07385 3 RIAHLSDLHLGPFVSRERLERLVEKINALKPD------LVVLTGDLVDGSVDVLELLLELLKKLKA--PLGVYAVLGNHD 74 (223)
T ss_pred EEEEEeecCCCccCCHHHHHHHHHHHhccCCC------EEEEcCcccCCcchhhHHHHHHHhccCC--CCCEEEECCCcc
Confidence 5899999998743 566666655432222 6888999999988765 55555554432 345999999999
Q ss_pred cc
Q 002713 661 AA 662 (889)
Q Consensus 661 ~~ 662 (889)
..
T Consensus 75 ~~ 76 (223)
T cd07385 75 YY 76 (223)
T ss_pred cc
Confidence 84
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0083 Score=60.16 Aligned_cols=65 Identities=17% Similarity=0.265 Sum_probs=43.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccch
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAAD 663 (889)
Q Consensus 585 ~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 663 (889)
..|.|++|.||...+..+..+.......+ -+|.+||++...... +|......+++.++||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d------~vih~GD~~~~~~~~--------~l~~~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVD------AVIHAGDSTSPFTLD--------ALEGGLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCC------EEEECCCcCCccchH--------HhhcccccceEEEEccCCCcc
Confidence 35899999999997655555554443333 688899999765421 111102368999999999843
|
|
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.049 Score=57.45 Aligned_cols=203 Identities=8% Similarity=0.056 Sum_probs=106.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccCcc-EEEEEC----C-EEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCC
Q 002713 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAH-AAAAVG----T-MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ 148 (889)
Q Consensus 75 ndv~~yD~~t~~W~~l~~~g~~P~~R~~h-aa~~~~----~-~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~ 148 (889)
..++++||.|++|..++.....+.....+ .+..++ . +|+.+.... .......+++|++.++. |+.+.. .
T Consensus 14 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~-~~~~~~~~~Vys~~~~~--Wr~~~~--~ 88 (230)
T TIGR01640 14 KRLVVWNPSTGQSRWLPTPKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRS-GNRNQSEHQVYTLGSNS--WRTIEC--S 88 (230)
T ss_pred CcEEEECCCCCCEEecCCCCCcccccccceEEEeecccCCcEEEEEEEeec-CCCCCccEEEEEeCCCC--cccccc--C
Confidence 46899999999999997432110001111 111122 1 666665431 11234578899999865 999842 1
Q ss_pred CCCCccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEE-ccCCCCCCCccc---ceEEEEecCCEEEEEcc
Q 002713 149 GPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQR-LNPEGDRPSARM---YATASARSDGMFLLCGG 224 (889)
Q Consensus 149 ~p~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~-v~~~~~~P~~r~---~~~a~~~~~~~l~v~GG 224 (889)
.+........+.+++ .+|-+...........+..||+.+. +|.. ++. |..+. .....+..+|+|.+...
T Consensus 89 ~~~~~~~~~~v~~~G-~lyw~~~~~~~~~~~~IvsFDl~~E--~f~~~i~~----P~~~~~~~~~~~L~~~~G~L~~v~~ 161 (230)
T TIGR01640 89 PPHHPLKSRGVCING-VLYYLAYTLKTNPDYFIVSFDVSSE--RFKEFIPL----PCGNSDSVDYLSLINYKGKLAVLKQ 161 (230)
T ss_pred CCCccccCCeEEECC-EEEEEEEECCCCCcEEEEEEEcccc--eEeeeeec----CccccccccceEEEEECCEEEEEEe
Confidence 221112222444454 6665554322111126889999999 7884 432 22111 12334445688888765
Q ss_pred CCCCCCcccceEEEecccCCeeEEEeCCCCCCCccce----eEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCC
Q 002713 225 RDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQ----HAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (889)
Q Consensus 225 ~~~~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~----hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~ 298 (889)
.... ..-++|.++......|+..-.-...+.++.. ...+..+++|++.-.. .. ..-+.+||+.++
T Consensus 162 ~~~~--~~~~IWvl~d~~~~~W~k~~~i~~~~~~~~~~~~~~~~~~~~g~I~~~~~~-~~------~~~~~~y~~~~~ 230 (230)
T TIGR01640 162 KKDT--NNFDLWVLNDAGKQEWSKLFTVPIPPLPDLVDDNFLSGFTDKGEIVLCCED-EN------PFYIFYYNVGEN 230 (230)
T ss_pred cCCC--CcEEEEEECCCCCCceeEEEEEcCcchhhhhhheeEeEEeeCCEEEEEeCC-CC------ceEEEEEeccCC
Confidence 4221 1258999876545556643222221222221 2334457888877542 10 113889998764
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.16 Score=58.15 Aligned_cols=184 Identities=17% Similarity=0.214 Sum_probs=102.0
Q ss_pred CCcEEEEECCCC--cEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCC
Q 002713 74 TNSVHLYDVLTR--KWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (889)
Q Consensus 74 ~ndv~~yD~~t~--~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~ 151 (889)
.+.++.+|..+. .|+.-.. + + ...+-++.++.||+..+. ..++.||..+.+..|+.-.. .+...
T Consensus 129 ~g~l~ald~~tG~~~W~~~~~-~----~-~~ssP~v~~~~v~v~~~~-------g~l~ald~~tG~~~W~~~~~-~~~~~ 194 (394)
T PRK11138 129 KGQVYALNAEDGEVAWQTKVA-G----E-ALSRPVVSDGLVLVHTSN-------GMLQALNESDGAVKWTVNLD-VPSLT 194 (394)
T ss_pred CCEEEEEECCCCCCcccccCC-C----c-eecCCEEECCEEEEECCC-------CEEEEEEccCCCEeeeecCC-CCccc
Confidence 346999999875 5875321 1 1 122234567888876542 35999999998888987521 11111
Q ss_pred CccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCC--CCCCCccc--ceEEEEecCCEEEEEccCCC
Q 002713 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPE--GDRPSARM--YATASARSDGMFLLCGGRDA 227 (889)
Q Consensus 152 ~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~--~~~P~~r~--~~~a~~~~~~~l~v~GG~~~ 227 (889)
.+...+-++.. +.+|+. ..+ ..++.+|..+....|+.-... +.....|. ..+.-++.++.+|+.+.
T Consensus 195 ~~~~~sP~v~~-~~v~~~-~~~-----g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~--- 264 (394)
T PRK11138 195 LRGESAPATAF-GGAIVG-GDN-----GRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAY--- 264 (394)
T ss_pred ccCCCCCEEEC-CEEEEE-cCC-----CEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEc---
Confidence 12222333333 456653 332 357889998877678753211 00000010 11222345778887552
Q ss_pred CCCcccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCC--eEEe
Q 002713 228 SGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG--VWLD 302 (889)
Q Consensus 228 ~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~--~W~~ 302 (889)
-..+++++..+ |+=.|....+. . ...+..+++||+... ...++.+|+++. .|+.
T Consensus 265 ----~g~l~ald~~t-G~~~W~~~~~~---~---~~~~~~~~~vy~~~~----------~g~l~ald~~tG~~~W~~ 320 (394)
T PRK11138 265 ----NGNLVALDLRS-GQIVWKREYGS---V---NDFAVDGGRIYLVDQ----------NDRVYALDTRGGVELWSQ 320 (394)
T ss_pred ----CCeEEEEECCC-CCEEEeecCCC---c---cCcEEECCEEEEEcC----------CCeEEEEECCCCcEEEcc
Confidence 12478888764 34345443221 1 124567899999753 245999999876 4764
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0021 Score=64.44 Aligned_cols=40 Identities=35% Similarity=0.525 Sum_probs=29.6
Q ss_pred eEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchh
Q 002713 620 DYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 620 ~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
.+|++||++++|..... +.+|.++ +..+++++||||....
T Consensus 45 ~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 45 TVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred EEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 79999999999986644 4444333 3569999999997543
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0013 Score=70.10 Aligned_cols=68 Identities=25% Similarity=0.190 Sum_probs=46.0
Q ss_pred CeEEEecCCCCH------HHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCC
Q 002713 586 PVKVFGDLHGQF------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNH 659 (889)
Q Consensus 586 ~i~vvGDiHG~~------~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 659 (889)
+|.+++|+|..+ ..|.++++.+.-...+ -+|+.||++++.+...+++..|..+ .+..++++.|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d------~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKID------HLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCC------EEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCC
Confidence 478999999763 2244555554322222 6889999999876666655555443 334699999999
Q ss_pred ccc
Q 002713 660 EAA 662 (889)
Q Consensus 660 E~~ 662 (889)
|..
T Consensus 72 D~~ 74 (239)
T TIGR03729 72 DML 74 (239)
T ss_pred CCC
Confidence 974
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.003 Score=74.39 Aligned_cols=119 Identities=17% Similarity=0.155 Sum_probs=60.9
Q ss_pred CCeEEEecCC-CCH----HHHHHHHHHhC-CCCCCC--CcceeeEEEeccccCC-CCCh---------------HHHHHH
Q 002713 585 APVKVFGDLH-GQF----GDLMRLFDEYG-FPSTAG--DITYIDYLFLGDYVDR-GQHS---------------LETITL 640 (889)
Q Consensus 585 ~~i~vvGDiH-G~~----~~l~~il~~~g-~~~~~~--~~~~~~~vfLGD~vDR-G~~s---------------~evl~l 640 (889)
..+++++||| |.- ..+.++++.+. ..+... .-.-..+|++||+||. |.+. -++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 5699999999 652 23444444332 211100 0001168999999994 3211 134445
Q ss_pred HHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHH-hCCCCchhhhhhhhhhcCCCceEEEEcC-eEEEecCCC
Q 002713 641 LLALKIEYPENVHLIRGNHEAADINALFGFRLECIER-MGENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGI 714 (889)
Q Consensus 641 l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~-~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~i~~vHgGi 714 (889)
|..|.. .-.|++++||||.........-..+++.. +.. .-..++.. |....+++ +++++||-.
T Consensus 324 L~~L~~--~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~--------~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIPE--DIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE--------HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhhc--CCeEEEecCCCcchhhccCCCCccHHHHHhcCc--------CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 555432 23599999999975533221111222222 211 01233333 65445554 789999954
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0021 Score=69.05 Aligned_cols=70 Identities=20% Similarity=0.289 Sum_probs=44.4
Q ss_pred eEEEecCCCCHHHHHHHHHHhC---CCCCCCCcceeeEEEeccccCCCC-ChHHHHH------HHH---HH---hhcCCC
Q 002713 587 VKVFGDLHGQFGDLMRLFDEYG---FPSTAGDITYIDYLFLGDYVDRGQ-HSLETIT------LLL---AL---KIEYPE 650 (889)
Q Consensus 587 i~vvGDiHG~~~~l~~il~~~g---~~~~~~~~~~~~~vfLGD~vDRG~-~s~evl~------ll~---~l---k~~~p~ 650 (889)
|+|+||+||+++.+.+.++... ..+.+ -+|++||+-..+. ..++.+. -+. ++ ..+.|-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D------~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~ 74 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVD------LLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPI 74 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCc------EEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCe
Confidence 6899999999998877554432 22222 5888999975443 3444332 111 11 233566
Q ss_pred cEEEecCCCccc
Q 002713 651 NVHLIRGNHEAA 662 (889)
Q Consensus 651 ~v~llrGNHE~~ 662 (889)
-+++|-||||..
T Consensus 75 ~t~fi~GNHE~~ 86 (262)
T cd00844 75 LTIFIGGNHEAS 86 (262)
T ss_pred eEEEECCCCCCH
Confidence 689999999974
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.74 Score=48.16 Aligned_cols=185 Identities=19% Similarity=0.222 Sum_probs=104.9
Q ss_pred CCcEEEEECCCC--cEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCC
Q 002713 74 TNSVHLYDVLTR--KWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (889)
Q Consensus 74 ~ndv~~yD~~t~--~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~ 151 (889)
.+.+++||..+. .|+.-.. .+.....+..++.||+..+. +.++.+|..+.+..|+......+...
T Consensus 45 ~~~l~~~d~~tG~~~W~~~~~------~~~~~~~~~~~~~v~v~~~~-------~~l~~~d~~tG~~~W~~~~~~~~~~~ 111 (238)
T PF13360_consen 45 DGNLYALDAKTGKVLWRFDLP------GPISGAPVVDGGRVYVGTSD-------GSLYALDAKTGKVLWSIYLTSSPPAG 111 (238)
T ss_dssp TSEEEEEETTTSEEEEEEECS------SCGGSGEEEETTEEEEEETT-------SEEEEEETTTSCEEEEEEE-SSCTCS
T ss_pred CCEEEEEECCCCCEEEEeecc------ccccceeeecccccccccce-------eeeEecccCCcceeeeeccccccccc
Confidence 467999999876 4775431 12222246778898888632 26999999998889994322121111
Q ss_pred CccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCCc----ccceEEEEecCCEEEEEccCCC
Q 002713 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSA----RMYATASARSDGMFLLCGGRDA 227 (889)
Q Consensus 152 ~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~----r~~~~a~~~~~~~l~v~GG~~~ 227 (889)
.+......+. ++.+|+... -..++.+|++++...|..-........+ -......++.++.+|++.+..
T Consensus 112 ~~~~~~~~~~-~~~~~~~~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g- 183 (238)
T PF13360_consen 112 VRSSSSPAVD-GDRLYVGTS------SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDG- 183 (238)
T ss_dssp TB--SEEEEE-TTEEEEEET------CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTS-
T ss_pred cccccCceEe-cCEEEEEec------cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCC-
Confidence 2333334333 446665543 3478999999987788875432110000 001233445567888877532
Q ss_pred CCCcccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCe--EE
Q 002713 228 SGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--WL 301 (889)
Q Consensus 228 ~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~--W~ 301 (889)
.+..++..+ +.-.|...... ........++.||+.. . ...++++|..|++ |+
T Consensus 184 ------~~~~~d~~t-g~~~w~~~~~~-----~~~~~~~~~~~l~~~~-~---------~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 184 ------RVVAVDLAT-GEKLWSKPISG-----IYSLPSVDGGTLYVTS-S---------DGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp ------SEEEEETTT-TEEEEEECSS------ECECEECCCTEEEEEE-T---------TTEEEEEETTTTEEEEE
T ss_pred ------eEEEEECCC-CCEEEEecCCC-----ccCCceeeCCEEEEEe-C---------CCEEEEEECCCCCEEeE
Confidence 157775554 45446333111 1112344578888876 2 2469999999875 65
|
... |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.058 Score=58.13 Aligned_cols=58 Identities=17% Similarity=0.124 Sum_probs=33.6
Q ss_pred HHHHHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEE-EEEEcCC
Q 002713 771 PDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGA-ILVVGRG 830 (889)
Q Consensus 771 ~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga-~l~~~~~ 830 (889)
.+.+.+.|++.++++++-||.-....... ++--.-+-.++.++-..++.|. ++.++++
T Consensus 195 ~~~l~~ll~~~~V~~v~~GH~H~~~~~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 253 (262)
T cd07395 195 RKPLLDKFKKAGVKAVFSGHYHRNAGGRY--GGLEMVVTSAIGAQLGNDKSGLRIVKVTED 253 (262)
T ss_pred HHHHHHHHHhcCceEEEECccccCCceEE--CCEEEEEcCceecccCCCCCCcEEEEECCC
Confidence 45677888999999999999987655432 3321112233333333334443 5566544
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0021 Score=67.17 Aligned_cols=73 Identities=22% Similarity=0.220 Sum_probs=46.0
Q ss_pred CeEEEecCC-CCH--------------HHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcC--
Q 002713 586 PVKVFGDLH-GQF--------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY-- 648 (889)
Q Consensus 586 ~i~vvGDiH-G~~--------------~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~-- 648 (889)
+++.++|+| |.. ..|.++++.......+ .+|+.||++|....+.+.+..+...-.+.
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 74 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVD------FVLIAGDLFDSNNPSPEALELLIEALRRLKE 74 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCC------EEEECCcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 478999999 322 2355555554332222 68999999998876555444443332222
Q ss_pred -CCcEEEecCCCccchh
Q 002713 649 -PENVHLIRGNHEAADI 664 (889)
Q Consensus 649 -p~~v~llrGNHE~~~~ 664 (889)
.-.++++.||||....
T Consensus 75 ~~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 75 AGIPVFIIAGNHDSPSR 91 (223)
T ss_pred CCCCEEEecCCCCCccc
Confidence 3469999999997654
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.78 Score=47.98 Aligned_cols=183 Identities=19% Similarity=0.267 Sum_probs=103.5
Q ss_pred CcEEEEECCCC--cEEEecCCCCCCcccCccE--EEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCC
Q 002713 75 NSVHLYDVLTR--KWTRIRPAGEPPSPRAAHA--AAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (889)
Q Consensus 75 ndv~~yD~~t~--~W~~l~~~g~~P~~R~~ha--a~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p 150 (889)
+.+.++|+.+. .|+.-. + ....+.. .+..++.+|+..+ ...++++|..+.+..|+.-.
T Consensus 3 g~l~~~d~~tG~~~W~~~~--~---~~~~~~~~~~~~~~~~v~~~~~-------~~~l~~~d~~tG~~~W~~~~------ 64 (238)
T PF13360_consen 3 GTLSALDPRTGKELWSYDL--G---PGIGGPVATAVPDGGRVYVASG-------DGNLYALDAKTGKVLWRFDL------ 64 (238)
T ss_dssp SEEEEEETTTTEEEEEEEC--S---SSCSSEEETEEEETTEEEEEET-------TSEEEEEETTTSEEEEEEEC------
T ss_pred CEEEEEECCCCCEEEEEEC--C---CCCCCccceEEEeCCEEEEEcC-------CCEEEEEECCCCCEEEEeec------
Confidence 46788998775 487522 1 1122222 3346888888843 35699999999888898762
Q ss_pred CCccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEE-EccCCCCCCCcccceEEEEecCCEEEEEccCCCCC
Q 002713 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQ-RLNPEGDRPSARMYATASARSDGMFLLCGGRDASG 229 (889)
Q Consensus 151 ~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~-~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~ 229 (889)
..+..... ...++.+|+.... +.++.+|..+....|+ ....... ..........+.++.+|+...
T Consensus 65 ~~~~~~~~-~~~~~~v~v~~~~------~~l~~~d~~tG~~~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----- 130 (238)
T PF13360_consen 65 PGPISGAP-VVDGGRVYVGTSD------GSLYALDAKTGKVLWSIYLTSSPP--AGVRSSSSPAVDGDRLYVGTS----- 130 (238)
T ss_dssp SSCGGSGE-EEETTEEEEEETT------SEEEEEETTTSCEEEEEEE-SSCT--CSTB--SEEEEETTEEEEEET-----
T ss_pred ccccccee-eecccccccccce------eeeEecccCCcceeeeeccccccc--cccccccCceEecCEEEEEec-----
Confidence 11111223 4444477766521 2789999999888999 4543211 222223333444666666553
Q ss_pred CcccceEEEecccCCeeEEEeCCCCCCC-c------cceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCe--E
Q 002713 230 APLADAYGLLMHRNGQWEWTLAPGVAPS-P------RYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--W 300 (889)
Q Consensus 230 ~~~~dv~~l~~~~~~~W~w~~~~~~~p~-~------R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~--W 300 (889)
...++.++..+ |+=.|.......+. . ......++.++.+|+..+.. .+..+|..+.+ |
T Consensus 131 --~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g----------~~~~~d~~tg~~~w 197 (238)
T PF13360_consen 131 --SGKLVALDPKT-GKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDG----------RVVAVDLATGEKLW 197 (238)
T ss_dssp --CSEEEEEETTT-TEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTS----------SEEEEETTTTEEEE
T ss_pred --cCcEEEEecCC-CcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCC----------eEEEEECCCCCEEE
Confidence 34578888663 34445443333111 1 11233344467888887632 25666999987 8
Q ss_pred Ee
Q 002713 301 LD 302 (889)
Q Consensus 301 ~~ 302 (889)
+.
T Consensus 198 ~~ 199 (238)
T PF13360_consen 198 SK 199 (238)
T ss_dssp EE
T ss_pred Ee
Confidence 44
|
... |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0031 Score=68.34 Aligned_cols=73 Identities=22% Similarity=0.319 Sum_probs=47.2
Q ss_pred CeEEEecCC-CC------------HHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCC-hHHHHHHHHHHhhcCCCc
Q 002713 586 PVKVFGDLH-GQ------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH-SLETITLLLALKIEYPEN 651 (889)
Q Consensus 586 ~i~vvGDiH-G~------------~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~-s~evl~ll~~lk~~~p~~ 651 (889)
++.+++|+| +. ...|.++++.+.....+ -+|++||+++.|.. +.+-+..++++-...+-.
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d------~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p 75 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLD------FVVQLGDIIDGDNARAEEALDAVLAILDRLKGP 75 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCC------EEEECCCeecCCCchHHHHHHHHHHHHHhcCCC
Confidence 588999999 22 35566666666422222 68899999999873 223343334333333346
Q ss_pred EEEecCCCccchh
Q 002713 652 VHLIRGNHEAADI 664 (889)
Q Consensus 652 v~llrGNHE~~~~ 664 (889)
++.+.||||....
T Consensus 76 ~~~v~GNHD~~~~ 88 (267)
T cd07396 76 VHHVLGNHDLYNP 88 (267)
T ss_pred EEEecCccccccc
Confidence 9999999998643
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.46 Score=54.01 Aligned_cols=182 Identities=22% Similarity=0.237 Sum_probs=96.4
Q ss_pred CcEEEEECCCC--cEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCC
Q 002713 75 NSVHLYDVLTR--KWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (889)
Q Consensus 75 ndv~~yD~~t~--~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~ 152 (889)
+.+++||..+. .|+.-... +...+.++.++.+|+.+.. ..+++||..+.+..|+.-.. + .
T Consensus 75 g~v~a~d~~tG~~~W~~~~~~------~~~~~p~v~~~~v~v~~~~-------g~l~ald~~tG~~~W~~~~~-~----~ 136 (377)
T TIGR03300 75 GTVVALDAETGKRLWRVDLDE------RLSGGVGADGGLVFVGTEK-------GEVIALDAEDGKELWRAKLS-S----E 136 (377)
T ss_pred CeEEEEEccCCcEeeeecCCC------CcccceEEcCCEEEEEcCC-------CEEEEEECCCCcEeeeeccC-c----e
Confidence 46999998875 48743211 1222334456777765432 36999999988888975421 1 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCcc
Q 002713 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (889)
Q Consensus 153 R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~ 232 (889)
...+. ++.++.+|+..+ + ..++.+|.++....|+.-..... ...+...+ .++.++.+| +|.. .
T Consensus 137 -~~~~p-~v~~~~v~v~~~-~-----g~l~a~d~~tG~~~W~~~~~~~~-~~~~~~~s-p~~~~~~v~-~~~~------~ 199 (377)
T TIGR03300 137 -VLSPP-LVANGLVVVRTN-D-----GRLTALDAATGERLWTYSRVTPA-LTLRGSAS-PVIADGGVL-VGFA------G 199 (377)
T ss_pred -eecCC-EEECCEEEEECC-C-----CeEEEEEcCCCceeeEEccCCCc-eeecCCCC-CEEECCEEE-EECC------C
Confidence 11222 233446666432 2 45899999988778986432210 00111122 233455554 4432 1
Q ss_pred cceEEEecccCCeeEEEeCCCCCC----Ccc---ceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCCe--EEe
Q 002713 233 ADAYGLLMHRNGQWEWTLAPGVAP----SPR---YQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--WLD 302 (889)
Q Consensus 233 ~dv~~l~~~~~~~W~w~~~~~~~p----~~R---~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~~--W~~ 302 (889)
..++.++..+ |+-.|........ ..| ...+.++.++.+|+... ...+++||+++.+ |+.
T Consensus 200 g~v~ald~~t-G~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~----------~g~l~a~d~~tG~~~W~~ 267 (377)
T TIGR03300 200 GKLVALDLQT-GQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSY----------QGRVAALDLRSGRVLWKR 267 (377)
T ss_pred CEEEEEEccC-CCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEc----------CCEEEEEECCCCcEEEee
Confidence 2477787653 3434543221110 011 12233456888888643 2358999998764 754
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.00017 Score=78.44 Aligned_cols=209 Identities=7% Similarity=-0.140 Sum_probs=142.4
Q ss_pred eeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCc
Q 002713 619 IDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLP 698 (889)
Q Consensus 619 ~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LP 698 (889)
...|+|+++++++.+.++.+-+-+..++.|-.+...+++||+. .++++.+.+..-...+...+|+..++.+..++
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~-----~~~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGD-----SSFKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccC-----cchhhhheeecccccCceEEEEeccCcCccce
Confidence 3789999999999999999999999999998899999999943 56677777766666677889999999999999
Q ss_pred eEEEEcCeEEEecCCCCCCCcCHHHhhcccCCcccCCCCchhhccccCCCCCCCC--CCCcccCCCCCceEEeCHH--HH
Q 002713 699 LAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDS--IEGLRPNARGPGLVTFGPD--RV 774 (889)
Q Consensus 699 laa~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~--~~~~~~n~rg~~~~~fg~~--~~ 774 (889)
...+.. +++|.||+..|+......+.++. +..-.+.....+. |-++.+.+. ..-|. .++.. ..||-| ..
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~hcla~g~v~--vs~lGd~~gn~kg-~f~llD~~~~~k~tw~--~~~~~-p~~gyDfwyq 196 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSHCLASGNVM--VSCLGDAEGNAKG-GFLLLDSDFNEKGTWE--KPGHS-PLFGYDFWYQ 196 (476)
T ss_pred eeeech-hhHhhcCCcCCcccccccCCCee--EEeecccccCCcC-CeEEecCccceecccc--cCCCc-cccccceeec
Confidence 998877 89999999999976655554321 1110000011111 333332210 01111 11111 222222 23
Q ss_pred HHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCC--ceEEeEEeccC
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRG--LVVVPKLIHPL 841 (889)
Q Consensus 775 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~ga~l~~~~~--~~~~~~~~~~~ 841 (889)
-.++.....+.+.+.|.-...++..+.++ ++.++.+-|.-...|.++.+-++.+ +.++.+.+|..
T Consensus 197 pr~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh~p 263 (476)
T KOG0918|consen 197 PRHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLHNP 263 (476)
T ss_pred cccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCCcceEEeeeccCC
Confidence 34666677788888888654444556666 8899999998888899999999774 33455666643
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0037 Score=67.12 Aligned_cols=71 Identities=23% Similarity=0.228 Sum_probs=45.2
Q ss_pred CeEEEecCCC-C-----------HHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHH----HHHHHHhhcCC
Q 002713 586 PVKVFGDLHG-Q-----------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETI----TLLLALKIEYP 649 (889)
Q Consensus 586 ~i~vvGDiHG-~-----------~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl----~ll~~lk~~~p 649 (889)
+++.++|+|- . +..|.++++.+.-...+ -+|+.||++|+..-+.+.. .+|..|+...|
T Consensus 2 kilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D------~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~ 75 (253)
T TIGR00619 2 RILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQID------ALLVAGDVFDTANPPAEAQELFNAFFRNLSDANP 75 (253)
T ss_pred EEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 5789999993 2 22344444443222222 6889999999987655443 34444444333
Q ss_pred CcEEEecCCCccc
Q 002713 650 ENVHLIRGNHEAA 662 (889)
Q Consensus 650 ~~v~llrGNHE~~ 662 (889)
-.++++.||||..
T Consensus 76 i~v~~i~GNHD~~ 88 (253)
T TIGR00619 76 IPIVVISGNHDSA 88 (253)
T ss_pred ceEEEEccCCCCh
Confidence 5699999999985
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0032 Score=63.37 Aligned_cols=43 Identities=26% Similarity=0.281 Sum_probs=27.2
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHHhhcCCCcEEEecCCCccc
Q 002713 620 DYLFLGDYVDRGQHS--LETITLLLALKIEYPENVHLIRGNHEAA 662 (889)
Q Consensus 620 ~~vfLGD~vDRG~~s--~evl~ll~~lk~~~p~~v~llrGNHE~~ 662 (889)
.+|++||++|..... .+...+-+.......-.+++++||||..
T Consensus 44 ~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 44 RLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred EEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 799999999865432 2222211111223445799999999984
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0041 Score=64.84 Aligned_cols=28 Identities=14% Similarity=0.115 Sum_probs=22.1
Q ss_pred eCHHHHHHHHHhcCCeEEEEeccccccc
Q 002713 769 FGPDRVSDFCKRNKLQLIIRAHECVMDG 796 (889)
Q Consensus 769 fg~~~~~~fl~~~~l~~iiR~H~~~~~G 796 (889)
..+..+.+.++..+.+++|-||.-...-
T Consensus 176 ~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 203 (217)
T cd07398 176 VFEEAVARLARRKGVDGVICGHTHRPAL 203 (217)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCe
Confidence 4556677888899999999999876433
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.16 Score=53.61 Aligned_cols=187 Identities=10% Similarity=0.137 Sum_probs=99.7
Q ss_pred CCcccccceeecCCCCCCCcccce--EEEeccccCCC-CEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcE
Q 002713 11 PSYRTLETYWDTDEDAPGPRCGHT--LTAVAATKTTG-PRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKW 87 (889)
Q Consensus 11 ~~yd~~~~~w~~~~~~P~pR~ght--~~~i~~~~~~~-~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W 87 (889)
-.+||.|++|..++.++.++..+. +..++-....+ =||+.+....... ....+.+|+..++.|
T Consensus 17 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~~--------------~~~~~~Vys~~~~~W 82 (230)
T TIGR01640 17 VVWNPSTGQSRWLPTPKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGNR--------------NQSEHQVYTLGSNSW 82 (230)
T ss_pred EEECCCCCCEEecCCCCCcccccccceEEEeecccCCcEEEEEEEeecCCC--------------CCccEEEEEeCCCCc
Confidence 346899999998876554322111 12221111112 2555554321110 235789999999999
Q ss_pred EEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEE-EeecCCCCCCc----cccEEEEEC
Q 002713 88 TRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHR-VVVQGQGPGPR----YGHVMDLVS 162 (889)
Q Consensus 88 ~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~-v~~~g~~p~~R----~~hs~~~~~ 162 (889)
+.+.... +........+.+++.+|.+...... .....+..||+.+++ |.. ++ +|..+ .....+.++
T Consensus 83 r~~~~~~--~~~~~~~~~v~~~G~lyw~~~~~~~-~~~~~IvsFDl~~E~--f~~~i~----~P~~~~~~~~~~~L~~~~ 153 (230)
T TIGR01640 83 RTIECSP--PHHPLKSRGVCINGVLYYLAYTLKT-NPDYFIVSFDVSSER--FKEFIP----LPCGNSDSVDYLSLINYK 153 (230)
T ss_pred cccccCC--CCccccCCeEEECCEEEEEEEECCC-CCcEEEEEEEcccce--Eeeeee----cCccccccccceEEEEEC
Confidence 9887322 1111222377889988888753211 111268899999976 774 42 23222 123455555
Q ss_pred CcEEEEEecCCCCcccCcEEEEe-cCCCCceEEEccCCCCCCCcccc---eEEEEecCCEEEEEcc
Q 002713 163 QRYLVSVSGNDGKRVLSDAWALD-TAQKPYVWQRLNPEGDRPSARMY---ATASARSDGMFLLCGG 224 (889)
Q Consensus 163 ~~~lyv~GG~~~~~~lndv~~yd-~~t~~~~W~~v~~~~~~P~~r~~---~~a~~~~~~~l~v~GG 224 (889)
+.|.++....... .-++|.++ -... .|++.-.....+.+... .......++.|++..+
T Consensus 154 -G~L~~v~~~~~~~-~~~IWvl~d~~~~--~W~k~~~i~~~~~~~~~~~~~~~~~~~~g~I~~~~~ 215 (230)
T TIGR01640 154 -GKLAVLKQKKDTN-NFDLWVLNDAGKQ--EWSKLFTVPIPPLPDLVDDNFLSGFTDKGEIVLCCE 215 (230)
T ss_pred -CEEEEEEecCCCC-cEEEEEECCCCCC--ceeEEEEEcCcchhhhhhheeEeEEeeCCEEEEEeC
Confidence 4676665433211 24788886 4345 69886443221222211 2333456677777664
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0053 Score=68.86 Aligned_cols=72 Identities=22% Similarity=0.314 Sum_probs=44.8
Q ss_pred CeEEEecCC-C-----------CHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCC-CChHHHHHHHHH----HhhcC
Q 002713 586 PVKVFGDLH-G-----------QFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRG-QHSLETITLLLA----LKIEY 648 (889)
Q Consensus 586 ~i~vvGDiH-G-----------~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG-~~s~evl~ll~~----lk~~~ 648 (889)
+++.++|+| | +...|.++++.+.-...+ -+|+.||++|+. +.+.+++.++.. +-...
T Consensus 2 KilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD------~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~ 75 (340)
T PHA02546 2 KILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGIT------TWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEA 75 (340)
T ss_pred eEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCC------EEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHC
Confidence 588999999 4 223444554444322222 688999999985 445555444433 11123
Q ss_pred CCcEEEecCCCccch
Q 002713 649 PENVHLIRGNHEAAD 663 (889)
Q Consensus 649 p~~v~llrGNHE~~~ 663 (889)
+-.+++|.||||...
T Consensus 76 gi~v~~I~GNHD~~~ 90 (340)
T PHA02546 76 GITLHVLVGNHDMYY 90 (340)
T ss_pred CCeEEEEccCCCccc
Confidence 456999999999743
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0088 Score=63.80 Aligned_cols=72 Identities=19% Similarity=0.232 Sum_probs=38.5
Q ss_pred EEEecCC--CCH---HHHHHHHHHhC-CCCCCCCcceeeEEEeccccCCCC-----C-------hH----HHHHHHHHHh
Q 002713 588 KVFGDLH--GQF---GDLMRLFDEYG-FPSTAGDITYIDYLFLGDYVDRGQ-----H-------SL----ETITLLLALK 645 (889)
Q Consensus 588 ~vvGDiH--G~~---~~l~~il~~~g-~~~~~~~~~~~~~vfLGD~vDRG~-----~-------s~----evl~ll~~lk 645 (889)
++++|+| +.. ..+..+++.+. ..+.... ...+|++||++|+.. . .. ++..+|..|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~--~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASR--VKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccC--ccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc
Confidence 6899999 432 22233444332 2110000 017899999999831 0 11 1233333333
Q ss_pred hcCCCcEEEecCCCccch
Q 002713 646 IEYPENVHLIRGNHEAAD 663 (889)
Q Consensus 646 ~~~p~~v~llrGNHE~~~ 663 (889)
. .-.|+++.||||...
T Consensus 80 ~--~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 S--HIKIIIIPGNHDAVR 95 (243)
T ss_pred c--CCeEEEeCCCCCccc
Confidence 2 346999999999853
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.008 Score=63.70 Aligned_cols=69 Identities=26% Similarity=0.305 Sum_probs=43.9
Q ss_pred CeEEEecCCCC------------HHHHHHHHHHhCCC--CCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCc
Q 002713 586 PVKVFGDLHGQ------------FGDLMRLFDEYGFP--STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPEN 651 (889)
Q Consensus 586 ~i~vvGDiHG~------------~~~l~~il~~~g~~--~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~ 651 (889)
++.+++|||=. ...|.++++.+.-. ..+ -+|++||+++.|.. +....+.++..+.+-.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d------~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPD------LVLVTGDLTDDGSP--ESYERLRELLAALPIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCC------EEEECccCCCCCCH--HHHHHHHHHHhhcCCC
Confidence 47899999944 34566777655432 222 58899999998753 2222222222223456
Q ss_pred EEEecCCCccc
Q 002713 652 VHLIRGNHEAA 662 (889)
Q Consensus 652 v~llrGNHE~~ 662 (889)
++.++||||..
T Consensus 73 ~~~v~GNHD~~ 83 (240)
T cd07402 73 VYLLPGNHDDR 83 (240)
T ss_pred EEEeCCCCCCH
Confidence 99999999974
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.93 Score=51.49 Aligned_cols=184 Identities=17% Similarity=0.202 Sum_probs=99.5
Q ss_pred CCcEEEEECCCC--cEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCC
Q 002713 74 TNSVHLYDVLTR--KWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (889)
Q Consensus 74 ~ndv~~yD~~t~--~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~ 151 (889)
.+.++.||..+. .|+.-.. + . ...+.+..++.+|+..+ ...++++|+.+.+..|+.-.. ++...
T Consensus 114 ~g~l~ald~~tG~~~W~~~~~-~----~-~~~~p~v~~~~v~v~~~-------~g~l~a~d~~tG~~~W~~~~~-~~~~~ 179 (377)
T TIGR03300 114 KGEVIALDAEDGKELWRAKLS-S----E-VLSPPLVANGLVVVRTN-------DGRLTALDAATGERLWTYSRV-TPALT 179 (377)
T ss_pred CCEEEEEECCCCcEeeeeccC-c----e-eecCCEEECCEEEEECC-------CCeEEEEEcCCCceeeEEccC-CCcee
Confidence 356899998775 4874321 1 1 12233445778877644 235899999988888976421 11111
Q ss_pred CccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCC--CCCCCccc--ceEEEEecCCEEEEEccCCC
Q 002713 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPE--GDRPSARM--YATASARSDGMFLLCGGRDA 227 (889)
Q Consensus 152 ~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~--~~~P~~r~--~~~a~~~~~~~l~v~GG~~~ 227 (889)
.+...+.++.+ +.+| +|..+ ..++.+|+.+....|+.-... +.....+. ..+...+.++.+|+.+.
T Consensus 180 ~~~~~sp~~~~-~~v~-~~~~~-----g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~--- 249 (377)
T TIGR03300 180 LRGSASPVIAD-GGVL-VGFAG-----GKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSY--- 249 (377)
T ss_pred ecCCCCCEEEC-CEEE-EECCC-----CEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEc---
Confidence 12223333444 4554 44433 268899998876678653211 00000010 11122345677777542
Q ss_pred CCCcccceEEEecccCCeeEEEeCCCCCCCccceeEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCC--eEEe
Q 002713 228 SGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG--VWLD 302 (889)
Q Consensus 228 ~~~~~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~--~W~~ 302 (889)
...+++++..+ +.=.|....+. ..+.++.++++|+... ...++++|..+. .|+.
T Consensus 250 ----~g~l~a~d~~t-G~~~W~~~~~~------~~~p~~~~~~vyv~~~----------~G~l~~~d~~tG~~~W~~ 305 (377)
T TIGR03300 250 ----QGRVAALDLRS-GRVLWKRDASS------YQGPAVDDNRLYVTDA----------DGVVVALDRRSGSELWKN 305 (377)
T ss_pred ----CCEEEEEECCC-CcEEEeeccCC------ccCceEeCCEEEEECC----------CCeEEEEECCCCcEEEcc
Confidence 12478888753 34345443211 1233456889998753 245899999876 4764
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.073 Score=57.92 Aligned_cols=73 Identities=26% Similarity=0.325 Sum_probs=50.4
Q ss_pred CeEEEecCCCC------HHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHH--hhcCCCcEEEecC
Q 002713 586 PVKVFGDLHGQ------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLAL--KIEYPENVHLIRG 657 (889)
Q Consensus 586 ~i~vvGDiHG~------~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~l--k~~~p~~v~llrG 657 (889)
++..|+|+|-- ...+..+++.+.....+ -+|+.||+.++|. .+-+..+..+ +...|..+++++|
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D------~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpG 73 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPD------LLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPG 73 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCC------EEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCC
Confidence 57889999977 34556666777644444 7999999999963 2222233222 3367788999999
Q ss_pred CCccchhhh
Q 002713 658 NHEAADINA 666 (889)
Q Consensus 658 NHE~~~~~~ 666 (889)
|||....+.
T Consensus 74 NHD~~~~~~ 82 (301)
T COG1409 74 NHDARVVNG 82 (301)
T ss_pred CCcCCchHH
Confidence 999876544
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.013 Score=61.63 Aligned_cols=69 Identities=22% Similarity=0.193 Sum_probs=41.0
Q ss_pred CCeEEEecCC-CCHHH----------------HHHHHHHhCCCCCCCCcceeeEEEeccccCCCCCh---HHHHHHHHHH
Q 002713 585 APVKVFGDLH-GQFGD----------------LMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS---LETITLLLAL 644 (889)
Q Consensus 585 ~~i~vvGDiH-G~~~~----------------l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s---~evl~ll~~l 644 (889)
+.+.||+|+| |.-.. |.++.+.......+ .+|++||+++..... -++..+|..+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d------~vIi~GDl~h~~~~~~~~~~~~~~l~~~ 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIE------ALIINGDLKHEFKKGLEWRFIREFIEVT 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCC------EEEEcCccccccCChHHHHHHHHHHHhc
Confidence 6689999999 54222 22222222221122 799999999765543 2222233332
Q ss_pred hhcCCCcEEEecCCCccch
Q 002713 645 KIEYPENVHLIRGNHEAAD 663 (889)
Q Consensus 645 k~~~p~~v~llrGNHE~~~ 663 (889)
...+++++||||...
T Consensus 89 ----~~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 89 ----FRDLILIRGNHDALI 103 (225)
T ss_pred ----CCcEEEECCCCCCcc
Confidence 247999999999753
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0069 Score=59.96 Aligned_cols=44 Identities=25% Similarity=0.297 Sum_probs=27.9
Q ss_pred eEEEeccccCCCCCh-HH----HHHHHHHHhhcC-CCcEEEecCCCccch
Q 002713 620 DYLFLGDYVDRGQHS-LE----TITLLLALKIEY-PENVHLIRGNHEAAD 663 (889)
Q Consensus 620 ~~vfLGD~vDRG~~s-~e----vl~ll~~lk~~~-p~~v~llrGNHE~~~ 663 (889)
.+||+||++|.+... .+ .+..+.++.... .-.++++.||||...
T Consensus 41 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 41 VVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 689999999988642 12 222222222222 346999999999743
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.023 Score=62.21 Aligned_cols=37 Identities=11% Similarity=0.200 Sum_probs=26.0
Q ss_pred CHHHHHHHHHhcCCeEEEEeccccccceEEecCCeEE
Q 002713 770 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLI 806 (889)
Q Consensus 770 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~i 806 (889)
....+.+.|+++++++++-||.-.-.-+....+++++
T Consensus 181 ~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~ 217 (294)
T cd00839 181 MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV 217 (294)
T ss_pred HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec
Confidence 3456778899999999999998764433333455544
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.011 Score=67.66 Aligned_cols=71 Identities=21% Similarity=0.332 Sum_probs=43.3
Q ss_pred CeEEEecCC-CC-H------HH----HHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHH----HHHHHHhhcCC
Q 002713 586 PVKVFGDLH-GQ-F------GD----LMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETI----TLLLALKIEYP 649 (889)
Q Consensus 586 ~i~vvGDiH-G~-~------~~----l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl----~ll~~lk~~~p 649 (889)
+++.++|+| |. + .+ |.++.+.+.-...+ -+|+.||++|++..+.+.. .++..|+. .+
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D------~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~ 74 (407)
T PRK10966 2 RILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVD------AIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TG 74 (407)
T ss_pred EEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCC------EEEECCccccCCCCcHHHHHHHHHHHHHHHh-cC
Confidence 578999999 42 1 11 22333333222222 6889999999986654433 33344443 23
Q ss_pred CcEEEecCCCccch
Q 002713 650 ENVHLIRGNHEAAD 663 (889)
Q Consensus 650 ~~v~llrGNHE~~~ 663 (889)
-.+++|.||||...
T Consensus 75 ~~v~~I~GNHD~~~ 88 (407)
T PRK10966 75 CQLVVLAGNHDSVA 88 (407)
T ss_pred CcEEEEcCCCCChh
Confidence 46999999999754
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.015 Score=63.20 Aligned_cols=69 Identities=12% Similarity=0.081 Sum_probs=45.4
Q ss_pred CeEEEecCC-C-----------CHHHHHHHHHHhCC-C-CCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCc
Q 002713 586 PVKVFGDLH-G-----------QFGDLMRLFDEYGF-P-STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPEN 651 (889)
Q Consensus 586 ~i~vvGDiH-G-----------~~~~l~~il~~~g~-~-~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~ 651 (889)
+++.|+|+| . ....|.++++.+.. . ..+ -+|+.||++|.|. .+-+..+++.-.+.+..
T Consensus 16 ~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D------~vvitGDl~~~~~--~~~~~~~~~~l~~l~~P 87 (275)
T PRK11148 16 RILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFD------LIVATGDLAQDHS--SEAYQHFAEGIAPLRKP 87 (275)
T ss_pred EEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCC------EEEECCCCCCCCC--HHHHHHHHHHHhhcCCc
Confidence 589999999 1 24567777766532 1 122 5889999999885 33333333333334556
Q ss_pred EEEecCCCccc
Q 002713 652 VHLIRGNHEAA 662 (889)
Q Consensus 652 v~llrGNHE~~ 662 (889)
++++.||||..
T Consensus 88 v~~v~GNHD~~ 98 (275)
T PRK11148 88 CVWLPGNHDFQ 98 (275)
T ss_pred EEEeCCCCCCh
Confidence 99999999973
|
|
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.017 Score=61.22 Aligned_cols=46 Identities=9% Similarity=-0.001 Sum_probs=30.3
Q ss_pred CHHHHHHHHHhcCCeEEEEeccccccceE---EecCCeEEEEecccccCCC
Q 002713 770 GPDRVSDFCKRNKLQLIIRAHECVMDGFE---RFAQGQLITLFSATNYCGT 817 (889)
Q Consensus 770 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~---~~~~~~~itvfSa~~y~~~ 817 (889)
+...+.+.+++.++++++-||.-...-.. ...+| |+.+++|.=|-.
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~~~ 229 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADYLN 229 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchhcC
Confidence 55677888999999999999986533222 12333 567776655533
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.023 Score=58.56 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=29.8
Q ss_pred eEEEeccccCCCCC---hHHHHHHHHHHhhcCCCcEEEecCCCc
Q 002713 620 DYLFLGDYVDRGQH---SLETITLLLALKIEYPENVHLIRGNHE 660 (889)
Q Consensus 620 ~~vfLGD~vDRG~~---s~evl~ll~~lk~~~p~~v~llrGNHE 660 (889)
.+|++||+++.+.. +.+.+..++.......-.++++.||||
T Consensus 44 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 87 (199)
T cd07383 44 LVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87 (199)
T ss_pred EEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECccCC
Confidence 68999999997765 355666555543333456899999999
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.036 Score=63.28 Aligned_cols=73 Identities=18% Similarity=0.144 Sum_probs=53.3
Q ss_pred CCeEEEecCCCC------------HHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhc-----
Q 002713 585 APVKVFGDLHGQ------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIE----- 647 (889)
Q Consensus 585 ~~i~vvGDiHG~------------~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~----- 647 (889)
.+|.+++|+|-- +..|.++++.+.-...+ -+|+.||++|++.-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD------~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~ 77 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVD------MILLGGDLFHENKPSRKSLYQVLRSLRLYCLGD 77 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHhhccC
Confidence 358999999942 45677777776433333 5888999999999999988776654332
Q ss_pred -------------------------------CCCcEEEecCCCccch
Q 002713 648 -------------------------------YPENVHLIRGNHEAAD 663 (889)
Q Consensus 648 -------------------------------~p~~v~llrGNHE~~~ 663 (889)
..--||+|-||||...
T Consensus 78 ~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 78 KPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred CccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1235999999999864
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.26 Score=53.06 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=26.8
Q ss_pred cccCCCCCc--eE-EeCHHHHHHHHHhcCCeEEEEeccc
Q 002713 757 LRPNARGPG--LV-TFGPDRVSDFCKRNKLQLIIRAHEC 792 (889)
Q Consensus 757 ~~~n~rg~~--~~-~fg~~~~~~fl~~~~l~~iiR~H~~ 792 (889)
+.+.+++.| .. .-.++..++.|+..+-.+|.-||+-
T Consensus 188 ~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 188 KTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred CCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCC
Confidence 344444444 11 3588999999999999999999984
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=95.42 E-value=7.8 Score=45.82 Aligned_cols=123 Identities=15% Similarity=0.110 Sum_probs=64.6
Q ss_pred CCcEEEEECCCC--cEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCC--CCccCcEEEEEccCCceEEEEEeecCCC
Q 002713 74 TNSVHLYDVLTR--KWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPA--GHSTDDLYVLDLTNDKFKWHRVVVQGQG 149 (889)
Q Consensus 74 ~ndv~~yD~~t~--~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~--~~~~~dv~~yD~~t~~~~W~~v~~~g~~ 149 (889)
.+.++.+|..+. .|+.-......+.-....+.++.++.+|+....... ......+++||..+.+..|+.-.....+
T Consensus 119 ~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~ 198 (488)
T cd00216 119 DGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDP 198 (488)
T ss_pred CCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCc
Confidence 357999999875 587532111000001223345556666654321110 0134679999999988889764321111
Q ss_pred CCCc---------------cccEEEEE-CCcEEEEEecCCC------------CcccCcEEEEecCCCCceEEEc
Q 002713 150 PGPR---------------YGHVMDLV-SQRYLVSVSGNDG------------KRVLSDAWALDTAQKPYVWQRL 196 (889)
Q Consensus 150 p~~R---------------~~hs~~~~-~~~~lyv~GG~~~------------~~~lndv~~yd~~t~~~~W~~v 196 (889)
...+ .-.+.++. .++.+|+..+... ....+.++.+|..+....|+.-
T Consensus 199 ~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~ 273 (488)
T cd00216 199 NAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQ 273 (488)
T ss_pred CCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEee
Confidence 1111 11122222 3456666544320 1123579999999988899864
|
The alignment model contains an 8-bladed beta-propeller. |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=95.18 E-value=9.2 Score=45.24 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=61.2
Q ss_pred CcEEEEECCCC--cEEEecCCCCC-Ccc-cCccEEEEEC-CEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCC
Q 002713 75 NSVHLYDVLTR--KWTRIRPAGEP-PSP-RAAHAAAAVG-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQG 149 (889)
Q Consensus 75 ndv~~yD~~t~--~W~~l~~~g~~-P~~-R~~haa~~~~-~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~ 149 (889)
..++.+|..+. .|+.-...... ..+ -.....++.+ ++||+... ...++.+|..+.+..|+.-......
T Consensus 71 g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~-------~g~v~AlD~~TG~~~W~~~~~~~~~ 143 (488)
T cd00216 71 SALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTF-------DGRLVALDAETGKQVWKFGNNDQVP 143 (488)
T ss_pred CcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecC-------CCeEEEEECCCCCEeeeecCCCCcC
Confidence 46899998875 58753322100 001 1112234445 77777543 2468999999988889864211100
Q ss_pred CCCccccEEEEECCcEEEEEecCCCC----cccCcEEEEecCCCCceEEEc
Q 002713 150 PGPRYGHVMDLVSQRYLVSVSGNDGK----RVLSDAWALDTAQKPYVWQRL 196 (889)
Q Consensus 150 p~~R~~hs~~~~~~~~lyv~GG~~~~----~~lndv~~yd~~t~~~~W~~v 196 (889)
+......+.++.+ +.+|+ |..+.. .....+++||..+....|+.-
T Consensus 144 ~~~~i~ssP~v~~-~~v~v-g~~~~~~~~~~~~g~v~alD~~TG~~~W~~~ 192 (488)
T cd00216 144 PGYTMTGAPTIVK-KLVII-GSSGAEFFACGVRGALRAYDVETGKLLWRFY 192 (488)
T ss_pred cceEecCCCEEEC-CEEEE-eccccccccCCCCcEEEEEECCCCceeeEee
Confidence 1111122333334 46664 432221 234678999999987789764
|
The alignment model contains an 8-bladed beta-propeller. |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.09 E-value=2.3 Score=44.13 Aligned_cols=205 Identities=18% Similarity=0.195 Sum_probs=116.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEecccc--CCCCChHHHHHH-HHHHhhcCCCcEEEecCCCcc
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYV--DRGQHSLETITL-LLALKIEYPENVHLIRGNHEA 661 (889)
Q Consensus 585 ~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~v--DRG~~s~evl~l-l~~lk~~~p~~v~llrGNHE~ 661 (889)
.++..+.||||.++.|.++++.......+ -+++.||+. ++|+.-.-.-.. +..++. +--.++.+.||-|.
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~~~~D------~lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD~ 76 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAADIRAD------LLVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCDP 76 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhhccCC------EEEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCCh
Confidence 46899999999999999998887644333 678899999 887643222211 344432 33579999999887
Q ss_pred chhhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEEcCeEEEecCCCCCCCc------CHHHhhcccCCcccCC
Q 002713 662 ADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIH------SVEQIEKLERPITMDA 735 (889)
Q Consensus 662 ~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHgGi~~~~~------~~~~i~~~~rp~~~~~ 735 (889)
..+-.. +...+. .+.. -...+++--||-=||..|.-- +-++|...-+-.....
T Consensus 77 ~~v~~~-------l~~~~~----~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~ 135 (226)
T COG2129 77 PEVIDV-------LKNAGV----NVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKA 135 (226)
T ss_pred HHHHHH-------HHhccc----cccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcc
Confidence 544221 111211 1111 112344445555578876531 3455554332211111
Q ss_pred CCchhhccccCCCCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEecCCeEEEEecccccC
Q 002713 736 GSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYC 815 (889)
Q Consensus 736 ~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~itvfSa~~y~ 815 (889)
....-.=++-+-|-. ...+ .+-| ...-|..++.+++++.+-.+.|-||=--..|++.- | =||+-.|.-.
T Consensus 136 ~~~~~Il~~HaPP~g-t~~d----~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~i--G--~TivVNPG~~ 204 (226)
T COG2129 136 DNPVNILLTHAPPYG-TLLD----TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKI--G--NTIVVNPGPL 204 (226)
T ss_pred cCcceEEEecCCCCC-cccc----CCCC--ccccchHHHHHHHHHhCCceEEEeeeccccccccc--C--CeEEECCCCc
Confidence 010001112333432 1111 2333 23458899999999999999999986656777642 2 2566665443
Q ss_pred CCCCCeEEEEEEcCC
Q 002713 816 GTANNAGAILVVGRG 830 (889)
Q Consensus 816 ~~~~n~ga~l~~~~~ 830 (889)
+ .-..|++.+++.
T Consensus 205 ~--~g~yA~i~l~~~ 217 (226)
T COG2129 205 G--EGRYALIELEKE 217 (226)
T ss_pred c--CceEEEEEecCc
Confidence 2 235688888776
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.058 Score=55.03 Aligned_cols=63 Identities=21% Similarity=0.188 Sum_probs=40.2
Q ss_pred cCCCCHHHHHHHHHHhCC--CCCCCCcceeeEEEeccccCCCCCh-HHHHHHHHHHhhcC--------------------
Q 002713 592 DLHGQFGDLMRLFDEYGF--PSTAGDITYIDYLFLGDYVDRGQHS-LETITLLLALKIEY-------------------- 648 (889)
Q Consensus 592 DiHG~~~~l~~il~~~g~--~~~~~~~~~~~~vfLGD~vDRG~~s-~evl~ll~~lk~~~-------------------- 648 (889)
|++|+=.=|.++++..-. .|+ .++||||++|.|--+ -|--..+..++..+
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd-------~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~ 96 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPD-------AVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFED 96 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCC-------EEEEeccccCCCcccHHHHHHHHHHHHHHhcCCccccccccccccccccc
Confidence 456666667777766542 222 688999999998533 33334444454433
Q ss_pred -CCcEEEecCCCcc
Q 002713 649 -PENVHLIRGNHEA 661 (889)
Q Consensus 649 -p~~v~llrGNHE~ 661 (889)
.-.+++|.||||.
T Consensus 97 ~~i~~i~V~GNHDI 110 (193)
T cd08164 97 GKTPLINIAGNHDV 110 (193)
T ss_pred CCceEEEECCcccC
Confidence 1357899999998
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.054 Score=58.26 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=22.5
Q ss_pred HHHHHHhcCCeEEEEeccccccceEEec
Q 002713 774 VSDFCKRNKLQLIIRAHECVMDGFERFA 801 (889)
Q Consensus 774 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~ 801 (889)
+.+.|++.++++++-||.-...+.+..+
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 7788999999999999998766645443
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=94.86 E-value=1.2 Score=48.32 Aligned_cols=111 Identities=14% Similarity=0.215 Sum_probs=69.3
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccCc--cEEEEE-CCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeec--CC
Q 002713 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAA--HAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ--GQ 148 (889)
Q Consensus 74 ~ndv~~yD~~t~~W~~l~~~g~~P~~R~~--haa~~~-~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~--g~ 148 (889)
-..+..||+.+.+|..+... -.+ .++... ++.||+.|-..-.+.....+-.||..+.+ |..+... ..
T Consensus 15 C~~lC~yd~~~~qW~~~g~~------i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~--w~~~~~~~s~~ 86 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNG------ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT--WSSLGGGSSNS 86 (281)
T ss_pred CCEEEEEECCCCEeecCCCC------ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe--eeecCCccccc
Confidence 56899999999999976532 222 233333 57888888765444345667889999955 9888542 24
Q ss_pred CCCCccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccC
Q 002713 149 GPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNP 198 (889)
Q Consensus 149 ~p~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~ 198 (889)
.|.+....+....+...+++.|... .-..-+..|| .. +|..+..
T Consensus 87 ipgpv~a~~~~~~d~~~~~~aG~~~--~g~~~l~~~d--Gs--~W~~i~~ 130 (281)
T PF12768_consen 87 IPGPVTALTFISNDGSNFWVAGRSA--NGSTFLMKYD--GS--SWSSIGS 130 (281)
T ss_pred CCCcEEEEEeeccCCceEEEeceec--CCCceEEEEc--CC--ceEeccc
Confidence 5666544444334555677777652 1223355554 34 7999875
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.069 Score=53.74 Aligned_cols=44 Identities=27% Similarity=0.321 Sum_probs=28.5
Q ss_pred eEEEeccccCCCCCh--HH---HHHHHHHHhhcC-----CCcEEEecCCCccch
Q 002713 620 DYLFLGDYVDRGQHS--LE---TITLLLALKIEY-----PENVHLIRGNHEAAD 663 (889)
Q Consensus 620 ~~vfLGD~vDRG~~s--~e---vl~ll~~lk~~~-----p~~v~llrGNHE~~~ 663 (889)
.+|||||++|.|... .+ .+..+..+.... .-.+++|.||||...
T Consensus 48 ~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 48 VVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred EEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 689999999998743 22 233333322111 346999999999853
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.084 Score=51.80 Aligned_cols=68 Identities=19% Similarity=0.306 Sum_probs=47.9
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCc
Q 002713 588 KVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 660 (889)
Q Consensus 588 ~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 660 (889)
.|+||+||+++.+..-++.+.-. .+.+ .-+|++||+..-....-+ +.-++.=+.+.|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k--~gpF--d~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKK--KGPF--DALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcc--cCCe--eEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 48999999999998887775321 1211 257889999976655533 33333445567888999999998
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=94.38 E-value=1 Score=50.69 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=73.5
Q ss_pred ECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCc------ccc
Q 002713 161 VSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP------LAD 234 (889)
Q Consensus 161 ~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~------~~d 234 (889)
+.+.+|+..+.. ..+..||+.+. .-...+. ++.+...- .++..+++||++......... .-+
T Consensus 74 l~gskIv~~d~~------~~t~vyDt~t~--av~~~P~---l~~pk~~p-isv~VG~~LY~m~~~~~~~~~~~~~~~~FE 141 (342)
T PF07893_consen 74 LHGSKIVAVDQS------GRTLVYDTDTR--AVATGPR---LHSPKRCP-ISVSVGDKLYAMDRSPFPEPAGRPDFPCFE 141 (342)
T ss_pred ecCCeEEEEcCC------CCeEEEECCCC--eEeccCC---CCCCCcce-EEEEeCCeEEEeeccCccccccCccceeEE
Confidence 344577776544 34789999997 3333333 34444444 334456679999876433221 112
Q ss_pred eEEEec-----ccCCeeEEEeCCCCCCCccc-------eeEEEEE-CCEEEE-EcCCCCCCCCccCCCcEEEEECCCCeE
Q 002713 235 AYGLLM-----HRNGQWEWTLAPGVAPSPRY-------QHAAVFV-GARLHV-TGGALRGGRAIEGEAAVAVLDTAAGVW 300 (889)
Q Consensus 235 v~~l~~-----~~~~~W~w~~~~~~~p~~R~-------~hs~~~~-~~~lyV-~GG~~~~~~~~~~~~~v~~yD~~t~~W 300 (889)
+..++. .....|.|..++.. |..+. -.+-+++ |..|+| .-|.. ...+.||+.+.+|
T Consensus 142 ~l~~~~~~~~~~~~~~w~W~~LP~P-Pf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~---------~GTysfDt~~~~W 211 (342)
T PF07893_consen 142 ALVYRPPPDDPSPEESWSWRSLPPP-PFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR---------WGTYSFDTESHEW 211 (342)
T ss_pred EeccccccccccCCCcceEEcCCCC-CccccCCcccceEEEEEEecCCeEEEEecCCc---------eEEEEEEcCCcce
Confidence 333331 34679999999774 44433 2344556 777888 43321 2389999999999
Q ss_pred EeccC
Q 002713 301 LDRNG 305 (889)
Q Consensus 301 ~~v~~ 305 (889)
+++..
T Consensus 212 ~~~Gd 216 (342)
T PF07893_consen 212 RKHGD 216 (342)
T ss_pred eeccc
Confidence 98754
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.17 Score=52.85 Aligned_cols=71 Identities=24% Similarity=0.315 Sum_probs=44.5
Q ss_pred cCCeEEEecCCCCHHHHH----------------HHHHH-h-CCCCCCCCcceeeEEEeccccCCCC-----ChHHHHHH
Q 002713 584 RAPVKVFGDLHGQFGDLM----------------RLFDE-Y-GFPSTAGDITYIDYLFLGDYVDRGQ-----HSLETITL 640 (889)
Q Consensus 584 ~~~i~vvGDiHG~~~~l~----------------~il~~-~-g~~~~~~~~~~~~~vfLGD~vDRG~-----~s~evl~l 640 (889)
..++.|+.|+|=-|+..+ +.++. . .+.+ + ++|+|||.-.-.+ ...|+-.+
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p-~------~lIilGD~KH~~~~~~~~e~~~~~~f 91 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGP-K------RLIILGDLKHEFGKSLRQEKEEVREF 91 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCC-C------EEEEcCccccccCccccccHHHHHHH
Confidence 478999999996554333 22221 1 1112 1 7999999985433 34555555
Q ss_pred HHHHhhcCCCcEEEecCCCccchh
Q 002713 641 LLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 641 l~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
+-.++.. .++++|||||...-
T Consensus 92 ~~~~~~~---evi~i~GNHD~~i~ 112 (235)
T COG1407 92 LELLDER---EVIIIRGNHDNGIE 112 (235)
T ss_pred HHHhccC---cEEEEeccCCCccc
Confidence 5555433 49999999998543
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.059 Score=55.04 Aligned_cols=43 Identities=19% Similarity=0.355 Sum_probs=32.4
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHHhhcCC----CcEEEecCCCccc
Q 002713 620 DYLFLGDYVDRGQHS--LETITLLLALKIEYP----ENVHLIRGNHEAA 662 (889)
Q Consensus 620 ~~vfLGD~vDRG~~s--~evl~ll~~lk~~~p----~~v~llrGNHE~~ 662 (889)
-+|||||++|.|+.+ .|....+..++..|. -.++.|.||||.-
T Consensus 45 ~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 45 IVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 689999999999853 346776766664433 4588999999974
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.13 Score=56.04 Aligned_cols=71 Identities=23% Similarity=0.221 Sum_probs=46.1
Q ss_pred CCeEEEecCCCCHHH--HHHHHHHhCCCCCCCCcceeeEEEeccccCC-CCChH-HHHHHHHHHhhcCCCcEEEecCCCc
Q 002713 585 APVKVFGDLHGQFGD--LMRLFDEYGFPSTAGDITYIDYLFLGDYVDR-GQHSL-ETITLLLALKIEYPENVHLIRGNHE 660 (889)
Q Consensus 585 ~~i~vvGDiHG~~~~--l~~il~~~g~~~~~~~~~~~~~vfLGD~vDR-G~~s~-evl~ll~~lk~~~p~~v~llrGNHE 660 (889)
.+|+-+.|+|=.... ..+.+........+ -+++.|||+|+ .+... .++..|..|+.. -.+|.+.||||
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~D------livltGD~~~~~~~~~~~~~~~~L~~L~~~--~gv~av~GNHd 116 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPD------LIVLTGDYVDGDRPPGVAALALFLAKLKAP--LGVFAVLGNHD 116 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCC------EEEEEeeeecCCCCCCHHHHHHHHHhhhcc--CCEEEEecccc
Confidence 359999999987655 22233332222223 68999999996 55444 455555556544 56999999998
Q ss_pred cch
Q 002713 661 AAD 663 (889)
Q Consensus 661 ~~~ 663 (889)
...
T Consensus 117 ~~~ 119 (284)
T COG1408 117 YGV 119 (284)
T ss_pred ccc
Confidence 743
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.27 Score=51.23 Aligned_cols=196 Identities=22% Similarity=0.260 Sum_probs=103.7
Q ss_pred EEecCCCC------HHHHHHHHHHhCCCCCCCCcceeeEEEeccccC--CCCC-----hHHHHHHHHHHhhcCCCcEEEe
Q 002713 589 VFGDLHGQ------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVD--RGQH-----SLETITLLLALKIEYPENVHLI 655 (889)
Q Consensus 589 vvGDiHG~------~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vD--RG~~-----s~evl~ll~~lk~~~p~~v~ll 655 (889)
.|+|+|=. -+.|+++++.... .++ .+.+|||++| .|.+ --+|...|..+. +-..+++.+
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad------~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i 73 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAA-QAD------ALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYI 73 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccc-cCc------EEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEe
Confidence 57888844 3445566655432 233 7889999997 2322 234555555543 345789999
Q ss_pred cCCCccchhhhhcCChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEE---cCeEEEecCCCCCCCc------------C
Q 002713 656 RGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALI---EKKIICMHGGIGRSIH------------S 720 (889)
Q Consensus 656 rGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i---~~~i~~vHgGi~~~~~------------~ 720 (889)
.||||. .+...+ ....| .+.-+|-..++ +.+++++||-.-.... -
T Consensus 74 ~GN~Df-ll~~~f------~~~~g-------------~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~ 133 (237)
T COG2908 74 HGNHDF-LLGKRF------AQEAG-------------GMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWA 133 (237)
T ss_pred cCchHH-HHHHHH------HhhcC-------------ceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccH
Confidence 999994 332222 11111 12233444333 5799999997643211 0
Q ss_pred HHHhhcccCCcccCCCCchhhccccCCCCCCCCCCCcccCCCCCc--eEEeCHHHHHHHHHhcCCeEEEEeccccccceE
Q 002713 721 VEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPG--LVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFE 798 (889)
Q Consensus 721 ~~~i~~~~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~--~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 798 (889)
..+..-+..|+..- ..+..=+|+.-. |.+...... +....+.++.+-+++++++.+|-||.-.+..-.
T Consensus 134 ~~~~lflnl~l~~R---~ri~~k~r~~s~-------~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~ 203 (237)
T COG2908 134 WLQLLFLNLPLRVR---RRIAYKIRSLSS-------WAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHN 203 (237)
T ss_pred HHHHHHHHhHHHHH---HHHHHHHHHhhH-------HhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhcc
Confidence 11111112222100 011122454431 111110101 123467788889999999999999987755543
Q ss_pred EecCCeEEEEecccccC--CCCCCeEEEEEEcCCce
Q 002713 799 RFAQGQLITLFSATNYC--GTANNAGAILVVGRGLV 832 (889)
Q Consensus 799 ~~~~~~~itvfSa~~y~--~~~~n~ga~l~~~~~~~ 832 (889)
.. + ..|| |.-...++++.++.+..
T Consensus 204 i~--~--------~~yi~lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 204 IP--G--------ITYINLGDWVSEGSILEVDDGGL 229 (237)
T ss_pred CC--C--------ceEEecCcchhcceEEEEecCcE
Confidence 31 1 2232 33335688998887754
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=93.54 E-value=21 Score=42.74 Aligned_cols=112 Identities=19% Similarity=0.173 Sum_probs=62.6
Q ss_pred CcEEEEECCCC--cEEEecCCC-CC-C---cccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecC
Q 002713 75 NSVHLYDVLTR--KWTRIRPAG-EP-P---SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG 147 (889)
Q Consensus 75 ndv~~yD~~t~--~W~~l~~~g-~~-P---~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 147 (889)
+.++.+|..+. .|+.-.... .. + ......+.++.+++||+... ...++++|..+.+..|+.-. .
T Consensus 79 g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~-------dg~l~ALDa~TGk~~W~~~~--~ 149 (527)
T TIGR03075 79 SRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTL-------DARLVALDAKTGKVVWSKKN--G 149 (527)
T ss_pred CcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcC-------CCEEEEEECCCCCEEeeccc--c
Confidence 46899998875 587533111 00 0 00112334566788887543 23599999999999997642 1
Q ss_pred CCCCC-ccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEc
Q 002713 148 QGPGP-RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRL 196 (889)
Q Consensus 148 ~~p~~-R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v 196 (889)
..... ....+-++.+ +.+|+.........-..++.||.++....|+.-
T Consensus 150 ~~~~~~~~tssP~v~~-g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 150 DYKAGYTITAAPLVVK-GKVITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred cccccccccCCcEEEC-CEEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 11111 1122233334 466654322222234678999999987778754
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.14 Score=54.73 Aligned_cols=66 Identities=32% Similarity=0.334 Sum_probs=41.9
Q ss_pred CeEEEecCCCCH---------HHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChH-----HHHHHHHHHhhcCCCc
Q 002713 586 PVKVFGDLHGQF---------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL-----ETITLLLALKIEYPEN 651 (889)
Q Consensus 586 ~i~vvGDiHG~~---------~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~-----evl~ll~~lk~~~p~~ 651 (889)
+|+.++|+||.+ ..|.++++...-...+ .-+|..||+++....+- .++..|-++ +-
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~-----~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~-----g~ 71 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENEN-----TLLLDAGDNFDGSPPSTATKGEANIELMNAL-----GY 71 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCC-----eEEEeCCccCCCccchhccCCcHHHHHHHhc-----CC
Confidence 478999999887 5566666665432111 14577999999887643 444444443 22
Q ss_pred EEEecCCCcc
Q 002713 652 VHLIRGNHEA 661 (889)
Q Consensus 652 v~llrGNHE~ 661 (889)
.++..||||.
T Consensus 72 d~~~~GNHe~ 81 (252)
T cd00845 72 DAVTIGNHEF 81 (252)
T ss_pred CEEeeccccc
Confidence 3345699996
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=92.94 E-value=1 Score=51.59 Aligned_cols=199 Identities=20% Similarity=0.209 Sum_probs=104.7
Q ss_pred CeEEEecCCC-CH----HHHHHHHHHhCCCCCCCCcceeeEEE-eccccCCC------------CChHHHHHHHHHHhhc
Q 002713 586 PVKVFGDLHG-QF----GDLMRLFDEYGFPSTAGDITYIDYLF-LGDYVDRG------------QHSLETITLLLALKIE 647 (889)
Q Consensus 586 ~i~vvGDiHG-~~----~~l~~il~~~g~~~~~~~~~~~~~vf-LGD~vDRG------------~~s~evl~ll~~lk~~ 647 (889)
.+.+++|+|= .. +.+.++++.++.+.+ .-...+|+. -||.||-. .+..|-...+..+-.+
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~--~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~ 304 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGD--LASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQ 304 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcc--cccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhh
Confidence 4889999995 22 334444555544432 112236665 77999942 2344455556665555
Q ss_pred CCCc--EEEecCCCccchhhhhc-CChHHHHHHhCCCCchhhhhhhhhhcCCCceEEEEcC-eEEEecCCCCCCCcCHHH
Q 002713 648 YPEN--VHLIRGNHEAADINALF-GFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGIGRSIHSVEQ 723 (889)
Q Consensus 648 ~p~~--v~llrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~i~~vHgGi~~~~~~~~~ 723 (889)
-|.+ |++.+|||+........ +|.......| ...+-.|-.=|.-.-+++ .+|..|| .+++|
T Consensus 305 vp~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf---------~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidD 369 (481)
T COG1311 305 VPEHIKVFIMPGNHDAVRQALPQPHFPELIKSLF---------SLNNLLFVSNPALVSLHGVDVLIYHG------RSIDD 369 (481)
T ss_pred CCCCceEEEecCCCCccccccCCCCcchhhcccc---------cccceEecCCCcEEEECCEEEEEecC------CCHHH
Confidence 5655 78999999986543222 3333333222 222222222244444444 6888998 67888
Q ss_pred hhcccCCcccCCCCchhhc-cccCC--CCCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEe
Q 002713 724 IEKLERPITMDAGSIILMD-LLWSD--PTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERF 800 (889)
Q Consensus 724 i~~~~rp~~~~~~~~~~~d-llWsd--P~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~ 800 (889)
|...-.....+.-...+.. |.|.- |+--+ .....|.. .- -|.=.---++++-||+.. .|+..+
T Consensus 370 ii~~vP~~~~~~~~~ame~lLk~rHlaPtygg-~~p~aP~~--kD----------~lVIeevPDv~~~Ghvh~-~g~~~y 435 (481)
T COG1311 370 IIKLVPGADYDSPLKAMEELLKRRHLAPTYGG-TLPIAPET--KD----------YLVIEEVPDVFHTGHVHK-FGTGVY 435 (481)
T ss_pred HHhhCCCCCccchHHHHHHHHHhcccCCCCCC-ccccccCC--cC----------ceeeccCCcEEEEccccc-cceeEE
Confidence 7665433322111112222 22332 21100 00111111 00 011111256788999987 899998
Q ss_pred cCCeEEEEecccccC
Q 002713 801 AQGQLITLFSATNYC 815 (889)
Q Consensus 801 ~~~~~itvfSa~~y~ 815 (889)
.+.++|..++-+..-
T Consensus 436 ~gv~~vns~T~q~qT 450 (481)
T COG1311 436 EGVNLVNSGTWQEQT 450 (481)
T ss_pred eccceEEeeeecchh
Confidence 888999888887664
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=92.88 E-value=5.1 Score=42.96 Aligned_cols=179 Identities=17% Similarity=0.235 Sum_probs=87.9
Q ss_pred eEEEeccccCCCCC------------------hHHHHHHHHHHhhcCC--CcEEEecCCCccchhhhhcCChHHHHHHhC
Q 002713 620 DYLFLGDYVDRGQH------------------SLETITLLLALKIEYP--ENVHLIRGNHEAADINALFGFRLECIERMG 679 (889)
Q Consensus 620 ~~vfLGD~vDRG~~------------------s~evl~ll~~lk~~~p--~~v~llrGNHE~~~~~~~~gf~~e~~~~~~ 679 (889)
++|+.||.|+.-.. ..|-+..+-.+-.+-+ =.|.++.||||-.....-.--...|+ |.
T Consensus 45 rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~l--fp 122 (257)
T cd07387 45 RLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCL--FP 122 (257)
T ss_pred EEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHH--hh
Confidence 68889999985432 2333333333322222 24889999999876554332222221 11
Q ss_pred CCCchhhhhhhhhhcCCCceEEEEcC-eEEEecCCCCCCCcCHHHhhcccC---Cccc-------CCCCchhhccccCCC
Q 002713 680 ENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGIGRSIHSVEQIEKLER---PITM-------DAGSIILMDLLWSDP 748 (889)
Q Consensus 680 ~~~~~~~~~~~~~~f~~LPlaa~i~~-~i~~vHgGi~~~~~~~~~i~~~~r---p~~~-------~~~~~~~~dllWsdP 748 (889)
.. ..|..+ .+-.=|....+++ +++..|| +++++|.+.-. ++++ -.-.+..-|-||.=|
T Consensus 123 ~s---~~~~~~--~~vtNP~~~~i~g~~vLgtsG------qni~Di~ky~~~~~~l~~me~~L~wrHlaPTaPDTL~~yP 191 (257)
T cd07387 123 KS---SNYSTL--NLVTNPYEFSIDGVRVLGTSG------QNVDDILKYSSLESRLDILERTLKWRHIAPTAPDTLWCYP 191 (257)
T ss_pred cc---cccCCc--EEeCCCeEEEECCEEEEEECC------CCHHHHHHhCCCCCHHHHHHHHHHhcccCCCCCCcccccc
Confidence 10 001111 1112266667765 7888888 56667654321 1110 000112334556555
Q ss_pred CCCCCCCCcccCCCCCceEEeCHHHHHHHHHhcCCeEEEEeccccccceEEec--CCeEEEEecccccCCCCCCeEEEEE
Q 002713 749 TENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFA--QGQLITLFSATNYCGTANNAGAILV 826 (889)
Q Consensus 749 ~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~--~~~~itvfSa~~y~~~~~n~ga~l~ 826 (889)
-.. .+.|.-.. ==..++-|||.. -|.+.+. +++-+.+.|.|.|..+ .-++|+
T Consensus 192 ~~~--~Dpfvi~~--------------------~PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~t---~~~vlv 245 (257)
T cd07387 192 FTD--RDPFILEE--------------------CPHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSKT---GTAVLV 245 (257)
T ss_pred CCC--CCceeecC--------------------CCCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCcC---CEEEEE
Confidence 211 01111110 033455688875 5555443 2667778888988643 234444
Q ss_pred EcCCceEEeEE
Q 002713 827 VGRGLVVVPKL 837 (889)
Q Consensus 827 ~~~~~~~~~~~ 837 (889)
-=+++.+.+..
T Consensus 246 dl~tLe~~~v~ 256 (257)
T cd07387 246 NLRTLECEPIS 256 (257)
T ss_pred ECCcCcEEEEe
Confidence 45567766543
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.46 Score=45.96 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=27.8
Q ss_pred eEEEeccccCCCCChHHHHHHHHHHhhcCCCcEEEecCCCccch
Q 002713 620 DYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAAD 663 (889)
Q Consensus 620 ~~vfLGD~vDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 663 (889)
.+.+|||+.-.-..--+...++-+| |++++|++||||.-.
T Consensus 48 ~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~GNhDk~~ 87 (186)
T COG4186 48 VLWHLGDLSSGANRERAAGLILERL----NGRKHLVPGNHDKCH 87 (186)
T ss_pred eEEEecccccccchhhHHHHHHHHc----CCcEEEeeCCCCCCc
Confidence 6889999985444434444444333 689999999999744
|
|
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=91.43 E-value=3.5 Score=46.36 Aligned_cols=121 Identities=17% Similarity=0.258 Sum_probs=73.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCc
Q 002713 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (889)
Q Consensus 45 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~ 124 (889)
+.||+..+.. ..+.+||+.+..-...+ .++.+...-.++.++++||++.........
T Consensus 76 gskIv~~d~~--------------------~~t~vyDt~t~av~~~P---~l~~pk~~pisv~VG~~LY~m~~~~~~~~~ 132 (342)
T PF07893_consen 76 GSKIVAVDQS--------------------GRTLVYDTDTRAVATGP---RLHSPKRCPISVSVGDKLYAMDRSPFPEPA 132 (342)
T ss_pred CCeEEEEcCC--------------------CCeEEEECCCCeEeccC---CCCCCCcceEEEEeCCeEEEeeccCccccc
Confidence 7788888654 23889999998776444 334555556778889999999876422111
Q ss_pred c----CcEEEE--E------ccCCceEEEEEeecCCCCCCccc-------cEEEEECCcEEEE-EecCCCCcccCcEEEE
Q 002713 125 T----DDLYVL--D------LTNDKFKWHRVVVQGQGPGPRYG-------HVMDLVSQRYLVS-VSGNDGKRVLSDAWAL 184 (889)
Q Consensus 125 ~----~dv~~y--D------~~t~~~~W~~v~~~g~~p~~R~~-------hs~~~~~~~~lyv-~GG~~~~~~lndv~~y 184 (889)
. ..++.+ + .....|.|+.++ ++|..+.. .+-+++++..|+| .-|.. ...|.|
T Consensus 133 ~~~~~~~FE~l~~~~~~~~~~~~~~w~W~~LP---~PPf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~-----~GTysf 204 (342)
T PF07893_consen 133 GRPDFPCFEALVYRPPPDDPSPEESWSWRSLP---PPPFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR-----WGTYSF 204 (342)
T ss_pred cCccceeEEEeccccccccccCCCcceEEcCC---CCCccccCCcccceEEEEEEecCCeEEEEecCCc-----eEEEEE
Confidence 0 144444 3 234568899983 33333322 1222334446665 22211 348999
Q ss_pred ecCCCCceEEEccC
Q 002713 185 DTAQKPYVWQRLNP 198 (889)
Q Consensus 185 d~~t~~~~W~~v~~ 198 (889)
|+.+. +|+++..
T Consensus 205 Dt~~~--~W~~~Gd 216 (342)
T PF07893_consen 205 DTESH--EWRKHGD 216 (342)
T ss_pred EcCCc--ceeeccc
Confidence 99999 8999843
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.28 Score=56.72 Aligned_cols=70 Identities=19% Similarity=0.135 Sum_probs=39.2
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChH--H-HHHHHHHHhhcCCCcEEEecCCCcc
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL--E-TITLLLALKIEYPENVHLIRGNHEA 661 (889)
Q Consensus 585 ~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~--e-vl~ll~~lk~~~p~~v~llrGNHE~ 661 (889)
-+++|+||+|-. ......++.+.....+ -+|++||+++-+.+.- + -..++-.+....| ++.+.||||.
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~~~pD------~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~ 210 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSKWDYD------VFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHEL 210 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHhcCCC------EEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccc
Confidence 458999999632 1122233333211122 5788999997654321 1 1223333333445 8899999998
Q ss_pred ch
Q 002713 662 AD 663 (889)
Q Consensus 662 ~~ 663 (889)
..
T Consensus 211 ~~ 212 (427)
T PLN02533 211 EK 212 (427)
T ss_pred cc
Confidence 54
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=89.98 E-value=0.43 Score=49.31 Aligned_cols=74 Identities=20% Similarity=0.310 Sum_probs=44.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCCh-------------------------HHHHH
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS-------------------------LETIT 639 (889)
Q Consensus 585 ~~i~vvGDiHG~~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s-------------------------~evl~ 639 (889)
.+|..++|.||+++.|.++.+.+.-...+ -+||+||++-....+ .|.+.
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D------~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPD------AVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-S------EEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCC------EEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 46899999999999999998765432333 699999998655333 34444
Q ss_pred HHHHHhhcCCCcEEEecCCCccchh
Q 002713 640 LLLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 640 ll~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
-++..--..+--++.|+||||....
T Consensus 80 ~ff~~L~~~~~p~~~vPG~~Dap~~ 104 (255)
T PF14582_consen 80 KFFRILGELGVPVFVVPGNMDAPER 104 (255)
T ss_dssp HHHHHHHCC-SEEEEE--TTS-SHH
T ss_pred HHHHHHHhcCCcEEEecCCCCchHH
Confidence 4444445566679999999998543
|
|
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=89.71 E-value=41 Score=38.08 Aligned_cols=197 Identities=18% Similarity=0.274 Sum_probs=101.1
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCC
Q 002713 74 TNSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (889)
Q Consensus 74 ~ndv~~yD~~t~~--W~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~ 151 (889)
...++.+|+.+.+ |....... ..-.......-+++||+....+ .+|+||.++.+..|..-... .
T Consensus 77 ~G~i~A~d~~~g~~~W~~~~~~~---~~~~~~~~~~~~G~i~~g~~~g-------~~y~ld~~~G~~~W~~~~~~---~- 142 (370)
T COG1520 77 DGNIFALNPDTGLVKWSYPLLGA---VAQLSGPILGSDGKIYVGSWDG-------KLYALDASTGTLVWSRNVGG---S- 142 (370)
T ss_pred CCcEEEEeCCCCcEEecccCcCc---ceeccCceEEeCCeEEEecccc-------eEEEEECCCCcEEEEEecCC---C-
Confidence 3479999999875 87543210 0011111112256766665532 79999998888899876332 1
Q ss_pred CccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCc
Q 002713 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (889)
Q Consensus 152 ~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~ 231 (889)
.++.-. .++.++.+|+.- .-+.++++|..+....|..-...+ . ..+.. ......++.+|+...- .
T Consensus 143 ~~~~~~-~v~~~~~v~~~s------~~g~~~al~~~tG~~~W~~~~~~~-~-~~~~~-~~~~~~~~~vy~~~~~----~- 207 (370)
T COG1520 143 PYYASP-PVVGDGTVYVGT------DDGHLYALNADTGTLKWTYETPAP-L-SLSIY-GSPAIASGTVYVGSDG----Y- 207 (370)
T ss_pred eEEecC-cEEcCcEEEEec------CCCeEEEEEccCCcEEEEEecCCc-c-ccccc-cCceeecceEEEecCC----C-
Confidence 333333 344554555432 235788999998777898544321 1 12212 2222566667764321 1
Q ss_pred ccceEEEecccCCeeEEEeCCCCCCCccce--eEEEEECCEEEEEcCCCCCCCCccCCCcEEEEECCCC--eEEeccC
Q 002713 232 LADAYGLLMHRNGQWEWTLAPGVAPSPRYQ--HAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG--VWLDRNG 305 (889)
Q Consensus 232 ~~dv~~l~~~~~~~W~w~~~~~~~p~~R~~--hs~~~~~~~lyV~GG~~~~~~~~~~~~~v~~yD~~t~--~W~~v~~ 305 (889)
...++.++... |+-.|...... +..+.. -...+.++.||+-||...... ...+.++|..+. .|+.-..
T Consensus 208 ~~~~~a~~~~~-G~~~w~~~~~~-~~~~~~~~~~~~~~~~~v~v~~~~~~~~~----~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 208 DGILYALNAED-GTLKWSQKVSQ-TIGRTAISTTPAVDGGPVYVDGGVYAGSY----GGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred cceEEEEEccC-CcEeeeeeeec-ccCcccccccccccCceEEECCcEEEEec----CCeEEEEEcCCCceEEEEecc
Confidence 12578888753 35555532111 011100 012333555555555211010 233778887764 4876554
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=89.36 E-value=0.55 Score=51.07 Aligned_cols=21 Identities=10% Similarity=0.262 Sum_probs=15.9
Q ss_pred HHHHHHHh-cCCeEEEEecccc
Q 002713 773 RVSDFCKR-NKLQLIIRAHECV 793 (889)
Q Consensus 773 ~~~~fl~~-~~l~~iiR~H~~~ 793 (889)
...+++++ -++++||=||+-+
T Consensus 208 ~~~~la~~~~~vD~IlgGHsH~ 229 (277)
T cd07410 208 AAYELAEEVPGIDAILTGHQHR 229 (277)
T ss_pred HHHHHHhcCCCCcEEEeCCCcc
Confidence 34566666 6899999999865
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=88.80 E-value=5.9 Score=43.11 Aligned_cols=125 Identities=18% Similarity=0.211 Sum_probs=70.0
Q ss_pred EEEcCcCCCC-CccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCc-ccCcEEEEecCCCC
Q 002713 113 VFQGGIGPAG-HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR-VLSDAWALDTAQKP 190 (889)
Q Consensus 113 yv~GG~~~~~-~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~-~lndv~~yd~~t~~ 190 (889)
||.|-....+ .....+-.||..+.+ |..+ +.--.... .++....++.+|+.|-..... ....+-.||..+.
T Consensus 2 ~VGG~F~~aGsL~C~~lC~yd~~~~q--W~~~---g~~i~G~V-~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~- 74 (281)
T PF12768_consen 2 YVGGSFTSAGSLPCPGLCLYDTDNSQ--WSSP---GNGISGTV-TDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ- 74 (281)
T ss_pred EEeeecCCCCCcCCCEEEEEECCCCE--eecC---CCCceEEE-EEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC-
Confidence 4555444333 356778889999855 9988 33322211 233334566888877654443 4566788999999
Q ss_pred ceEEEccCC--CCCCCcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeEEEeCCC
Q 002713 191 YVWQRLNPE--GDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPG 253 (889)
Q Consensus 191 ~~W~~v~~~--~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~w~~~~~ 253 (889)
+|+.+... ...|.+-..-.........+++.|.. ..+ ..-+..|+-. +|..+..
T Consensus 75 -~w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~-~~g--~~~l~~~dGs-----~W~~i~~ 130 (281)
T PF12768_consen 75 -TWSSLGGGSSNSIPGPVTALTFISNDGSNFWVAGRS-ANG--STFLMKYDGS-----SWSSIGS 130 (281)
T ss_pred -eeeecCCcccccCCCcEEEEEeeccCCceEEEecee-cCC--CceEEEEcCC-----ceEeccc
Confidence 99888762 34555532222222234467776665 332 2234555333 5666543
|
|
| >PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases | Back alignment and domain information |
|---|
Probab=88.26 E-value=1.6 Score=39.32 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=32.4
Q ss_pred CchHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceEee
Q 002713 531 PQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQL 583 (889)
Q Consensus 531 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~ 583 (889)
+..+++.+|+.+-+.+ .|+...+..|+.++.++|+++|+++++
T Consensus 53 t~efv~~mie~FK~~K----------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 53 TLEFVKAMIEWFKNQK----------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp -HHHHHHHHHHHHCT--------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CHHHHHHHHHHHHhCC----------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 4467788888877553 478899999999999999999999985
|
; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D .... |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=87.63 E-value=1.5 Score=50.33 Aligned_cols=73 Identities=21% Similarity=0.174 Sum_probs=47.5
Q ss_pred CeEEEecCCCC-------------HHHHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCChHHHHHHHHHHhhcCC---
Q 002713 586 PVKVFGDLHGQ-------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYP--- 649 (889)
Q Consensus 586 ~i~vvGDiHG~-------------~~~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s~evl~ll~~lk~~~p--- 649 (889)
++..++|+|=- +..|..+++.+.-...+ -+|+-||+.|++.=|.+++.++...-.+.-
T Consensus 2 kilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD------~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~ 75 (390)
T COG0420 2 KILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVD------FVLIAGDLFDTNNPSPRALKLFLEALRRLKDAG 75 (390)
T ss_pred eeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCC------EEEEccccccCCCCCHHHHHHHHHHHHHhccCC
Confidence 56778888843 23333444433222222 588899999999988888777666533221
Q ss_pred CcEEEecCCCccchh
Q 002713 650 ENVHLIRGNHEAADI 664 (889)
Q Consensus 650 ~~v~llrGNHE~~~~ 664 (889)
--|++|.||||....
T Consensus 76 Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 76 IPVVVIAGNHDSPSR 90 (390)
T ss_pred CcEEEecCCCCchhc
Confidence 249999999998653
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=86.63 E-value=1.5 Score=49.59 Aligned_cols=42 Identities=33% Similarity=0.426 Sum_probs=32.2
Q ss_pred eEEEeccccCCCCC--hHHHHHHHHHHhhcCCC----cEEEecCCCcc
Q 002713 620 DYLFLGDYVDRGQH--SLETITLLLALKIEYPE----NVHLIRGNHEA 661 (889)
Q Consensus 620 ~~vfLGD~vDRG~~--s~evl~ll~~lk~~~p~----~v~llrGNHE~ 661 (889)
-++||||++|-|.. .-|--....++|..|+. .++.+.||||-
T Consensus 96 vvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 96 VVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred EEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 57889999998874 34555666667666665 58899999997
|
|
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.71 E-value=17 Score=41.24 Aligned_cols=192 Identities=17% Similarity=0.189 Sum_probs=97.7
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcE-EEecCCCCCCcccCccEEEEECCEEEEEcCcCCCCC
Q 002713 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKW-TRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGH 123 (889)
Q Consensus 45 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~ndv~~yD~~t~~W-~~l~~~g~~P~~R~~haa~~~~~~Iyv~GG~~~~~~ 123 (889)
.--+++.+|..+ +-.+|..|-.+|.- +.+.-. ..|. .......-|...++++|..
T Consensus 224 ~~plllvaG~d~-----------------~lrifqvDGk~N~~lqS~~l~-~fPi--~~a~f~p~G~~~i~~s~rr---- 279 (514)
T KOG2055|consen 224 TAPLLLVAGLDG-----------------TLRIFQVDGKVNPKLQSIHLE-KFPI--QKAEFAPNGHSVIFTSGRR---- 279 (514)
T ss_pred CCceEEEecCCC-----------------cEEEEEecCccChhheeeeec-cCcc--ceeeecCCCceEEEecccc----
Confidence 345888888753 34566667666652 111111 1121 1111111233478888752
Q ss_pred ccCcEEEEEccCCceEEEEEeecCCCCCCccccEEEEECCcEEEEEecCCCCcccCcEEEEecCCCCceEEEccCCCCCC
Q 002713 124 STDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRP 203 (889)
Q Consensus 124 ~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~lndv~~yd~~t~~~~W~~v~~~~~~P 203 (889)
.-+|.||+.+.+ -.++.....++ .+.-+...+..++.++++-|..| -++.+...|+ .|.. .. .-
T Consensus 280 --ky~ysyDle~ak--~~k~~~~~g~e-~~~~e~FeVShd~~fia~~G~~G-----~I~lLhakT~--eli~--s~--Ki 343 (514)
T KOG2055|consen 280 --KYLYSYDLETAK--VTKLKPPYGVE-EKSMERFEVSHDSNFIAIAGNNG-----HIHLLHAKTK--ELIT--SF--KI 343 (514)
T ss_pred --eEEEEeeccccc--cccccCCCCcc-cchhheeEecCCCCeEEEcccCc-----eEEeehhhhh--hhhh--ee--ee
Confidence 457999998855 55553322233 23344444444556777777765 3555666666 4421 11 01
Q ss_pred CcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCC-eeEEEeCCCCCCCccceeEEE-EECCEEEEEcCCCCCC
Q 002713 204 SARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNG-QWEWTLAPGVAPSPRYQHAAV-FVGARLHVTGGALRGG 281 (889)
Q Consensus 204 ~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~-~W~w~~~~~~~p~~R~~hs~~-~~~~~lyV~GG~~~~~ 281 (889)
..+....+......+|+++||. ..+|.++..... ...|+...+. ++-+.| ..++..+..|--
T Consensus 344 eG~v~~~~fsSdsk~l~~~~~~-------GeV~v~nl~~~~~~~rf~D~G~v-----~gts~~~S~ng~ylA~GS~---- 407 (514)
T KOG2055|consen 344 EGVVSDFTFSSDSKELLASGGT-------GEVYVWNLRQNSCLHRFVDDGSV-----HGTSLCISLNGSYLATGSD---- 407 (514)
T ss_pred ccEEeeEEEecCCcEEEEEcCC-------ceEEEEecCCcceEEEEeecCcc-----ceeeeeecCCCceEEeccC----
Confidence 2333333333344577777764 358888877552 2345444333 222333 346676666542
Q ss_pred CCccCCCcEEEEECCC
Q 002713 282 RAIEGEAAVAVLDTAA 297 (889)
Q Consensus 282 ~~~~~~~~v~~yD~~t 297 (889)
..-|-+||.++
T Consensus 408 -----~GiVNIYd~~s 418 (514)
T KOG2055|consen 408 -----SGIVNIYDGNS 418 (514)
T ss_pred -----cceEEEeccch
Confidence 22366777654
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=84.72 E-value=1.8 Score=46.78 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=19.8
Q ss_pred HHHHHHHHHhcCCeEEEEecccc
Q 002713 771 PDRVSDFCKRNKLQLIIRAHECV 793 (889)
Q Consensus 771 ~~~~~~fl~~~~l~~iiR~H~~~ 793 (889)
...+.+++++.+++++|-||.-.
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~ 212 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHN 212 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCccc
Confidence 46778899999999999999865
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=84.45 E-value=58 Score=38.96 Aligned_cols=132 Identities=14% Similarity=0.096 Sum_probs=71.0
Q ss_pred EEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceEEEEEeecCCCCCC-----ccccEEEEECCcEEEEEecCCCCccc
Q 002713 104 AAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP-----RYGHVMDLVSQRYLVSVSGNDGKRVL 178 (889)
Q Consensus 104 aa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~-----R~~hs~~~~~~~~lyv~GG~~~~~~l 178 (889)
+-+++++.||+.... ..++++|..+.+..|+.-........+ ...... .+.++++|+ +..+
T Consensus 64 tPvv~~g~vyv~s~~-------g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~-av~~~~v~v-~t~d----- 129 (527)
T TIGR03075 64 QPLVVDGVMYVTTSY-------SRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGV-ALYDGKVFF-GTLD----- 129 (527)
T ss_pred CCEEECCEEEEECCC-------CcEEEEECCCCceeeEecCCCCcccccccccccccccc-eEECCEEEE-EcCC-----
Confidence 345678899986552 359999999988889864221100000 111122 333446765 3322
Q ss_pred CcEEEEecCCCCceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccC-CeeEEEeCC
Q 002713 179 SDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN-GQWEWTLAP 252 (889)
Q Consensus 179 ndv~~yd~~t~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~-~~W~w~~~~ 252 (889)
..++++|.++....|+.-... ........++-++.++++|+.... .+......++.|+..+. ..|++...+
T Consensus 130 g~l~ALDa~TGk~~W~~~~~~--~~~~~~~tssP~v~~g~Vivg~~~-~~~~~~G~v~AlD~~TG~~lW~~~~~p 201 (527)
T TIGR03075 130 ARLVALDAKTGKVVWSKKNGD--YKAGYTITAAPLVVKGKVITGISG-GEFGVRGYVTAYDAKTGKLVWRRYTVP 201 (527)
T ss_pred CEEEEEECCCCCEEeeccccc--ccccccccCCcEEECCEEEEeecc-cccCCCcEEEEEECCCCceeEeccCcC
Confidence 368999999988889864321 111111112234457777664321 11112345788887643 256655554
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=83.81 E-value=1.5 Score=47.94 Aligned_cols=66 Identities=26% Similarity=0.351 Sum_probs=40.7
Q ss_pred CeEEEecCCCCHHH--------------HHHHHHHhCCCCCCCCcceeeEEEeccccCCCCC-h-----HHHHHHHHHHh
Q 002713 586 PVKVFGDLHGQFGD--------------LMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH-S-----LETITLLLALK 645 (889)
Q Consensus 586 ~i~vvGDiHG~~~~--------------l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~-s-----~evl~ll~~lk 645 (889)
.|+.+.|+||++.. |..+++........ .-+|..||+++..+. + -.++.++-++.
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~-----~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g 76 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPN-----SLFVSAGDLIGASPFESALLQDEPTIEALNAMG 76 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCC-----eEEEeCCcccccccchhhcccCCcHHHHHHhhC
Confidence 47889999998653 55566655432111 156779999976653 2 24455555553
Q ss_pred hcCCCcEEEecCCCcc
Q 002713 646 IEYPENVHLIRGNHEA 661 (889)
Q Consensus 646 ~~~p~~v~llrGNHE~ 661 (889)
. . .+..||||.
T Consensus 77 ~----D-a~t~GNHef 87 (288)
T cd07412 77 V----D-ASAVGNHEF 87 (288)
T ss_pred C----e-eeeeccccc
Confidence 2 2 355699996
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate [] | Back alignment and domain information |
|---|
Probab=83.62 E-value=1.1 Score=52.83 Aligned_cols=69 Identities=26% Similarity=0.282 Sum_probs=47.8
Q ss_pred CHHHHHHHHHhcCCe----EEEEeccccc--cceE-EecCCeEEEE---ecccccCCCCCCeEEEEEEcCCceEEeEEec
Q 002713 770 GPDRVSDFCKRNKLQ----LIIRAHECVM--DGFE-RFAQGQLITL---FSATNYCGTANNAGAILVVGRGLVVVPKLIH 839 (889)
Q Consensus 770 g~~~~~~fl~~~~l~----~iiR~H~~~~--~G~~-~~~~~~~itv---fSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~ 839 (889)
.++..++.|+..||+ .||-||.+|. +|=. .-++||++.| ||.. |..+.+=+|=-|+. +...+.....+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTLiy-NS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTLIY-NSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEEEe-cCCcceeccCC
Confidence 677888999999999 9999999996 5643 4689999999 7765 65555545544444 33333333444
Q ss_pred c
Q 002713 840 P 840 (889)
Q Consensus 840 ~ 840 (889)
|
T Consensus 585 p 585 (640)
T PF06874_consen 585 P 585 (640)
T ss_pred C
Confidence 4
|
This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=83.11 E-value=2.1 Score=46.04 Aligned_cols=65 Identities=22% Similarity=0.205 Sum_probs=38.2
Q ss_pred CeEEEecCCCCHH----------HHHHHHHHhCCCCCCCCcceeeEEEeccccCCCCCh-----HHHHHHHHHHhhcCCC
Q 002713 586 PVKVFGDLHGQFG----------DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS-----LETITLLLALKIEYPE 650 (889)
Q Consensus 586 ~i~vvGDiHG~~~----------~l~~il~~~g~~~~~~~~~~~~~vfLGD~vDRG~~s-----~evl~ll~~lk~~~p~ 650 (889)
.|.-+.|+||++. .|..+++...-.+. .-+|..||+++..+.+ ..++..|-.+. -
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~------~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~ 71 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDN------DLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----Y 71 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCC------EEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----C
Confidence 4678999999853 45555655532211 2567799999875532 22333333332 2
Q ss_pred cEEEecCCCcc
Q 002713 651 NVHLIRGNHEA 661 (889)
Q Consensus 651 ~v~llrGNHE~ 661 (889)
.+ +..||||.
T Consensus 72 d~-~~~GNHef 81 (257)
T cd07408 72 DA-VTPGNHEF 81 (257)
T ss_pred cE-Eccccccc
Confidence 33 45699996
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium [] | Back alignment and domain information |
|---|
Probab=80.23 E-value=82 Score=33.73 Aligned_cols=159 Identities=13% Similarity=0.078 Sum_probs=77.7
Q ss_pred CcccCccEEEEECCEEEEEcCcCCCCCccCcEEEEEccCCceE-EEEEeecCCC---CCCcccc---EEEEECCcEEEEE
Q 002713 97 PSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFK-WHRVVVQGQG---PGPRYGH---VMDLVSQRYLVSV 169 (889)
Q Consensus 97 P~~R~~haa~~~~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~-W~~v~~~g~~---p~~R~~h---s~~~~~~~~lyv~ 169 (889)
|-+-.+-+.+++++.+|..=. .++.+.+||+.+.... |..++..+-. |-...++ -.++-.+|.-+|+
T Consensus 66 p~~~~GtG~vVYngslYY~~~------~s~~IvkydL~t~~v~~~~~L~~A~~~n~~~y~~~~~t~iD~AvDE~GLWvIY 139 (250)
T PF02191_consen 66 PYPWQGTGHVVYNGSLYYNKY------NSRNIVKYDLTTRSVVARRELPGAGYNNRFPYYWSGYTDIDFAVDENGLWVIY 139 (250)
T ss_pred eceeccCCeEEECCcEEEEec------CCceEEEEECcCCcEEEEEECCccccccccceecCCCceEEEEEcCCCEEEEE
Confidence 344556666778887777644 3578999999998766 6666332221 1111122 3334455544444
Q ss_pred ecCCCCcccCcEEEEecCCCC--ceEEEccCCCCCCCcccceEEEEecCCEEEEEccCCCCCCcccceEEEecccCCeeE
Q 002713 170 SGNDGKRVLSDAWALDTAQKP--YVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWE 247 (889)
Q Consensus 170 GG~~~~~~lndv~~yd~~t~~--~~W~~v~~~~~~P~~r~~~~a~~~~~~~l~v~GG~~~~~~~~~dv~~l~~~~~~~W~ 247 (889)
.-.+..+ .-.+-++|+.+-. -+|..-- +....+ .|.+ .-|.||+.-..+... ..=.+.||..+. +
T Consensus 140 at~~~~g-~ivvskld~~tL~v~~tw~T~~-----~k~~~~-naFm-vCGvLY~~~s~~~~~--~~I~yafDt~t~---~ 206 (250)
T PF02191_consen 140 ATEDNNG-NIVVSKLDPETLSVEQTWNTSY-----PKRSAG-NAFM-VCGVLYATDSYDTRD--TEIFYAFDTYTG---K 206 (250)
T ss_pred ecCCCCC-cEEEEeeCcccCceEEEEEecc-----Cchhhc-ceee-EeeEEEEEEECCCCC--cEEEEEEECCCC---c
Confidence 4333221 1123345555421 1565321 122222 2332 334788877654443 223467777754 2
Q ss_pred EEeCCCCCCCccc-eeEEEEE---CCEEEEEc
Q 002713 248 WTLAPGVAPSPRY-QHAAVFV---GARLHVTG 275 (889)
Q Consensus 248 w~~~~~~~p~~R~-~hs~~~~---~~~lyV~G 275 (889)
-.. ....-..++ .+++..+ +.+||+.-
T Consensus 207 ~~~-~~i~f~~~~~~~~~l~YNP~dk~LY~wd 237 (250)
T PF02191_consen 207 EED-VSIPFPNPYGNISMLSYNPRDKKLYAWD 237 (250)
T ss_pred eec-eeeeeccccCceEeeeECCCCCeEEEEE
Confidence 222 222122233 3344444 56799884
|
Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=80.08 E-value=3.6 Score=44.39 Aligned_cols=35 Identities=26% Similarity=0.212 Sum_probs=20.7
Q ss_pred EEEeccccCCCCChH-----HHHHHHHHHhhcCCCcEEEecCCCcc
Q 002713 621 YLFLGDYVDRGQHSL-----ETITLLLALKIEYPENVHLIRGNHEA 661 (889)
Q Consensus 621 ~vfLGD~vDRG~~s~-----evl~ll~~lk~~~p~~v~llrGNHE~ 661 (889)
+|..||+++..+.+. .++.++-++ + --.+. ||||.
T Consensus 55 ~l~~GD~~~gs~~~~~~~g~~~~~~l~~~----g-~da~~-GNHef 94 (264)
T cd07411 55 LLDGGDTWQGSGEALYTRGQAMVDALNAL----G-VDAMV-GHWEF 94 (264)
T ss_pred EEeCCCccCCChHHhhcCChhHHHHHHhh----C-CeEEe-ccccc
Confidence 455999998775432 334444443 2 23444 99996
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 889 | ||||
| 1s70_A | 330 | Complex Between Protein Ser/thr Phosphatase-1 (delt | 6e-72 | ||
| 1jk7_A | 323 | Crystal Structure Of The Tumor-Promoter Okadaic Aci | 3e-71 | ||
| 2o8a_A | 329 | Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Leng | 3e-71 | ||
| 4g9j_A | 331 | Protein SerTHR PHOSPHATASE-1 In Complex With Cell-P | 1e-70 | ||
| 1fjm_A | 330 | Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isofor | 1e-70 | ||
| 3egg_A | 329 | Crystal Structure Of A Complex Between Protein Phos | 2e-70 | ||
| 3n5u_B | 300 | Crystal Structure Of An Rb C-Terminal Peptide Bound | 3e-70 | ||
| 3v4y_A | 306 | Crystal Structure Of The First Nuclear Pp1 Holoenzy | 3e-70 | ||
| 3e7a_A | 299 | Crystal Structure Of Protein Phosphatase-1 Bound To | 4e-70 | ||
| 1u32_A | 293 | Crystal Structure Of A Protein Phosphatase-1: Calci | 3e-69 | ||
| 3c5w_C | 310 | Complex Between Pp2a-Specific Methylesterase Pme-1 | 6e-52 | ||
| 2ie4_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 2e-51 | ||
| 3p71_C | 304 | Crystal Structure Of The Complex Of Lcmt-1 And Pp2a | 2e-51 | ||
| 2ie3_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 2e-51 | ||
| 2nyl_C | 293 | Crystal Structure Of Protein Phosphatase 2a (Pp2a) | 2e-51 | ||
| 2iae_C | 309 | Crystal Structure Of A Protein Phosphatase 2a (Pp2a | 5e-51 | ||
| 3fga_C | 309 | Structural Basis Of Pp2a And Sgo Interaction Length | 6e-51 | ||
| 1aui_A | 521 | Human Calcineurin Heterodimer Length = 521 | 5e-43 | ||
| 2p6b_A | 383 | Crystal Structure Of Human Calcineurin In Complex W | 1e-42 | ||
| 1m63_A | 372 | Crystal Structure Of Calcineurin-Cyclophilin-Cyclos | 1e-42 | ||
| 3ll8_A | 357 | Crystal Structure Of Calcineurin In Complex With Ak | 2e-42 | ||
| 1mf8_A | 373 | Crystal Structure Of Human Calcineurin Complexed Wi | 2e-42 | ||
| 1tco_A | 375 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 2e-42 | ||
| 2jog_A | 327 | Structure Of The Calcineurin-Nfat Complex Length = | 2e-42 | ||
| 1wao_1 | 477 | Pp5 Structure Length = 477 | 1e-38 | ||
| 1s95_A | 333 | Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 | 2e-38 | ||
| 3h60_A | 315 | Catalytic Domain Of Human SerineTHREONINE PHOSPHATA | 2e-38 | ||
| 3icf_A | 335 | Structure Of Protein SerineTHREONINE PHOSPHATASE FR | 8e-38 |
| >pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 330 | Back alignment and structure |
|
| >pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound To Protein Phosphatase-1 Length = 323 | Back alignment and structure |
|
| >pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Length = 329 | Back alignment and structure |
|
| >pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With Cell-Permeable Peptide Length = 331 | Back alignment and structure |
|
| >pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type 1) Complexed With Microcystin-Lr Toxin Length = 330 | Back alignment and structure |
|
| >pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Spinophilin Length = 329 | Back alignment and structure |
|
| >pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme Length = 306 | Back alignment and structure |
|
| >pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The Natural Toxin Nodularin-R Length = 299 | Back alignment and structure |
|
| >pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin Hybrid Bound To Okadaic Acid Length = 293 | Back alignment and structure |
|
| >pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310 | Back alignment and structure |
|
| >pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Okadaic Acid Length = 309 | Back alignment and structure |
|
| >pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a Length = 304 | Back alignment and structure |
|
| >pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Tumor- Inducing Toxins Length = 309 | Back alignment and structure |
|
| >pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 293 | Back alignment and structure |
|
| >pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 309 | Back alignment and structure |
|
| >pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction Length = 309 | Back alignment and structure |
|
| >pdb|1AUI|A Chain A, Human Calcineurin Heterodimer Length = 521 | Back alignment and structure |
|
| >pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 383 | Back alignment and structure |
|
| >pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin Shows Common But Distinct Recognition Of Immunophilin-Drug Complexes Length = 372 | Back alignment and structure |
|
| >pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 357 | Back alignment and structure |
|
| >pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 373 | Back alignment and structure |
|
| >pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 375 | Back alignment and structure |
|
| >pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex Length = 327 | Back alignment and structure |
|
| >pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 | Back alignment and structure |
|
| >pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 Length = 333 | Back alignment and structure |
|
| >pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5 (Pp5c)with Two Mn2+ Atoms Length = 315 | Back alignment and structure |
|
| >pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM SACCHAROMYCES Cerevisiae With Similarity To Human Phosphatase Pp5 Length = 335 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 889 | |||
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 1e-146 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 1e-141 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 1e-125 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 1e-115 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 1e-114 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 1e-113 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 1e-111 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 1e-106 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 4e-29 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 7e-26 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 4e-07 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 3e-28 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 5e-18 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 2e-15 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 4e-13 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 2e-08 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 2e-15 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 1e-12 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 1e-10 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 1e-12 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 2e-12 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 2e-12 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 3e-12 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 2e-08 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 1e-05 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 2e-12 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 3e-10 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 6e-06 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 2e-12 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 3e-12 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 5e-10 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 3e-11 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 3e-11 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 1e-09 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 3e-11 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 3e-09 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 2e-08 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 3e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 5e-05 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 7e-05 |
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Length = 330 | Back alignment and structure |
|---|
Score = 434 bits (1118), Expect = e-146
Identities = 146/345 (42%), Positives = 203/345 (58%), Gaps = 29/345 (8%)
Query: 537 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 596
II LL + + + L E+ LC + +IF+ +P +L+L AP+K+ GD+HGQ
Sbjct: 11 SIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 68
Query: 597 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 656
+ DL+RLF+ GFP + +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+R
Sbjct: 69 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122
Query: 657 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 716
GNHE A IN ++GF EC R W F FNCLP+AA++++KI C HGG+
Sbjct: 123 GNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 178
Query: 717 SIHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVS 775
+ S+EQI ++ RP + D G +L DLLWSDP ++ ++G N RG TFG + V+
Sbjct: 179 DLQSMEQIRRIMRPTDVPDQG--LLCDLLWSDPDKD--VQGWGENDRGVS-FTFGAEVVA 233
Query: 776 DFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVP 835
F ++ L LI RAH+ V DG+E FA+ QL+TLFSA NYCG +NAGA++ V L+
Sbjct: 234 KFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSF 293
Query: 836 KLIHPLPPPLQSPETSPERVIDDMWMQELN-IQRPPTPTRGRPQP 879
+++ P + + LN RP TP R +
Sbjct: 294 QILKP----------ADKNKGKYGQFSGLNPGGRPITPPRNSAKA 328
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Length = 299 | Back alignment and structure |
|---|
Score = 420 bits (1081), Expect = e-141
Identities = 139/306 (45%), Positives = 193/306 (63%), Gaps = 18/306 (5%)
Query: 537 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 596
II LL + + + L E+ LC + +IF+ +P +L+L AP+K+ GD+HGQ
Sbjct: 10 SIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 67
Query: 597 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 656
+ DL+RLF+ GFP + +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+R
Sbjct: 68 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121
Query: 657 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 716
GNHE A IN ++GF EC R W F FNCLP+AA++++KI C HGG+
Sbjct: 122 GNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 177
Query: 717 SIHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVS 775
+ S+EQI ++ RP + D G +L DLLWSDP ++ ++G N RG TFG + V+
Sbjct: 178 DLQSMEQIRRIMRPTDVPDQG--LLCDLLWSDPDKD--VQGWGENDRGVS-FTFGAEVVA 232
Query: 776 DFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVP 835
F ++ L LI RAH+ V DG+E FA+ QL+TLFSA NYCG +NAGA++ V L+
Sbjct: 233 KFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSF 292
Query: 836 KLIHPL 841
+++ P
Sbjct: 293 QILKPA 298
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Length = 309 | Back alignment and structure |
|---|
Score = 380 bits (978), Expect = e-125
Identities = 121/323 (37%), Positives = 169/323 (52%), Gaps = 29/323 (8%)
Query: 537 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 596
+ I L + L +V LC A++I +E V ++R PV V GD+HGQ
Sbjct: 12 QWIEQLNECKQ----------LSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQ 61
Query: 597 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 656
F DLM LF G +YLF+GDYVDRG +S+ET+TLL+ALK+ Y E + ++R
Sbjct: 62 FHDLMELFRIGGKSPDT------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILR 115
Query: 657 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 716
GNHE+ I ++GF EC+ + G N + W F LF+ LPL AL++ +I C+HGG+
Sbjct: 116 GNHESRQITQVYGFYDECLRKYG-NANV--WKYFTDLFDYLPLTALVDGQIFCLHGGLSP 172
Query: 717 SIHSVEQIEKLERPITM-DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVS 775
SI +++ I L+R + G + DLLWSDP D G + RG G TFG D
Sbjct: 173 SIDTLDHIRALDRLQEVPHEG--PMCDLLWSDP---DDRGGWGISPRGAG-YTFGQDISE 226
Query: 776 DFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVP 835
F N L L+ RAH+ VM+G+ ++T+FSA NYC N AI+ + L
Sbjct: 227 TFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSF 286
Query: 836 KLIHPLPPPLQSPETSPERVIDD 858
P P + E R D
Sbjct: 287 LQFDPAP---RRGEPHVTRRTPD 306
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Length = 335 | Back alignment and structure |
|---|
Score = 353 bits (907), Expect = e-115
Identities = 99/287 (34%), Positives = 146/287 (50%), Gaps = 23/287 (8%)
Query: 562 EVGELCYAAEQIFMQEPTVLQLR------APVKVFGDLHGQFGDLMRLFDEYGFPSTAGD 615
V + A+ +F QEP++++L + V GD HGQF D++ LF ++G
Sbjct: 35 YVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLFRKFGKVGP--- 91
Query: 616 ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECI 675
YLF GD+VDRG S E L LKI +P N L RGNHE+ ++N ++GF EC
Sbjct: 92 --KHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECK 149
Query: 676 ERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIG-RSIHSVEQIEKLERPITM- 733
+ + + F Q F LPLA LI + MHGG+ ++ + ++R
Sbjct: 150 YKYSQR----IFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPP 205
Query: 734 DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECV 793
G M+LLW+DP G+ P+ RG G FGPD F + NKL+ I R+HE
Sbjct: 206 RDG--AFMELLWADP---QEANGMGPSQRGLG-HAFGPDITDRFLRNNKLRKIFRSHELR 259
Query: 794 MDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHP 840
M G + +G+L+T+FSA NYC + N G ++ V G ++ +
Sbjct: 260 MGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRND 306
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Length = 315 | Back alignment and structure |
|---|
Score = 351 bits (904), Expect = e-114
Identities = 91/272 (33%), Positives = 140/272 (51%), Gaps = 21/272 (7%)
Query: 562 EVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 617
++ +++ + T+++ + V GD HGQF DL+ +F+ G PS
Sbjct: 33 CAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-- 90
Query: 618 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 677
Y+F GD+VDRG S+E I L K+ YP++ HL+RGNHE ++N ++GF E +
Sbjct: 91 ---YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAK 147
Query: 678 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIG-RSIHSVEQIEKLERPITM-DA 735
+ F+++F LPLA I K++ MHGG+ +++ I K+ER D+
Sbjct: 148 YTAQ----MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDS 203
Query: 736 GSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMD 795
G + DLLWSDP G + RG FGPD F + N L IIR+HE +
Sbjct: 204 G--PMCDLLWSDP---QPQNGRSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEVKAE 257
Query: 796 GFERFAQGQLITLFSATNYCGTANNAGAILVV 827
G+E G+ +T+FSA NYC N + + +
Sbjct: 258 GYEVAHGGRCVTVFSAPNYCDQMGNKASYIHL 289
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Length = 357 | Back alignment and structure |
|---|
Score = 350 bits (899), Expect = e-113
Identities = 107/306 (34%), Positives = 152/306 (49%), Gaps = 28/306 (9%)
Query: 558 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 617
L+ + I QE +L + APV V GD+HGQF DLM+LF+ G P+
Sbjct: 43 LEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT---- 98
Query: 618 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 677
YLFLGDYVDRG S+E + L ALKI YP+ + L+RGNHE + F F+ EC +
Sbjct: 99 --RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 156
Query: 678 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITM-DAG 736
E + F+CLPLAAL+ ++ +C+HGG+ I++++ I KL+R G
Sbjct: 157 YSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 212
Query: 737 SIILM-DLLWSDPTEN-----DSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAH 790
M D+LWSDP E+ RG + V +F + N L I+RAH
Sbjct: 213 ---PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHNNLLSILRAH 268
Query: 791 ECVMDGFERFAQGQ------LITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPP 844
E G+ + + Q LIT+FSA NY NN A+L ++ + + + P P
Sbjct: 269 EAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNI-RQFNCSPHP 327
Query: 845 LQSPET 850
P
Sbjct: 328 YWLPNF 333
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 348 bits (894), Expect = e-111
Identities = 96/294 (32%), Positives = 146/294 (49%), Gaps = 22/294 (7%)
Query: 562 EVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 617
++ +++ + T+++ + V GD HGQF DL+ +F+ G PS
Sbjct: 186 CAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-- 243
Query: 618 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 677
Y+F GD+VDRG S+E I L K+ YP++ HL+RGNHE ++N ++GF E +
Sbjct: 244 ---YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAK 300
Query: 678 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIG-RSIHSVEQIEKLERPITM-DA 735
+ F+++F LPLA I K++ MHGG+ +++ I K+ER D+
Sbjct: 301 YTAQ----MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDS 356
Query: 736 GSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMD 795
G + DLLWSDP G + RG FGPD F + N L IIR+HE +
Sbjct: 357 G--PMCDLLWSDP---QPQNGRSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEVKAE 410
Query: 796 GFERFAQGQLITLFSATNYCGTANNAGAIL-VVGRGLVVVPKLIHPLPPPLQSP 848
G+E G+ +T+FSA NYC N + + + G L +P P P
Sbjct: 411 GYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKP 464
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 337 bits (867), Expect = e-106
Identities = 107/304 (35%), Positives = 152/304 (50%), Gaps = 28/304 (9%)
Query: 558 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 617
L+ + I QE +L + APV V GD+HGQF DLM+LF+ G P+
Sbjct: 56 LEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT---- 111
Query: 618 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 677
YLFLGDYVDRG S+E + L ALKI YP+ + L+RGNHE + F F+ EC +
Sbjct: 112 --RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 169
Query: 678 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITM-DAG 736
E + F+CLPLAAL+ ++ +C+HGG+ I++++ I KL+R G
Sbjct: 170 YSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 225
Query: 737 SIILM-DLLWSDPTEN-----DSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAH 790
M D+LWSDP E+ RG + V +F + N L I+RAH
Sbjct: 226 ---PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHNNLLSILRAH 281
Query: 791 ECVMDGFERFAQGQ------LITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPP 844
E G+ + + Q LIT+FSA NY NN A+L ++ + + + P P
Sbjct: 282 EAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNI-RQFNCSPHP 340
Query: 845 LQSP 848
P
Sbjct: 341 YWLP 344
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 4e-29
Identities = 42/276 (15%), Positives = 89/276 (32%), Gaps = 41/276 (14%)
Query: 15 TLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVT 74
++ + + P R HT T ++ +L+L GG A P L
Sbjct: 425 DMKNIEVSSSEVPVARMCHTFTTIS----RNNQLLLIGGRKA---------PHQGL---- 467
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLD 132
+ ++D+ TR+W+ I+ R H+A ++ G +++ GG+ + + +
Sbjct: 468 SDNWIFDMKTREWSMIKS---LSHTRFRHSACSLPDGNVLIL-GGVT----EGPAMLLYN 519
Query: 133 LTNDKFKWHRVVVQGQGPGPRYGH---VMDLVSQRYLVSVSGNDGKRVLSDA---WALDT 186
+T + + V + + D VS++ ++ G + +SD + D
Sbjct: 520 VT--EEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577
Query: 187 AQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMH-RNGQ 245
+ R + + L+ GG SG + + +
Sbjct: 578 ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637
Query: 246 WEWTLAPGVAPSP----RYQHAAVFVGA-RLHVTGG 276
+ V +H+ GG
Sbjct: 638 LTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 7e-26
Identities = 54/328 (16%), Positives = 88/328 (26%), Gaps = 41/328 (12%)
Query: 84 TRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRV 143
+ ++ E P R G V + GG + +++ L + DK +
Sbjct: 373 VDEDYQLLE-CECPINRKFGDVDVAGNDVFYMGGSN--PYRVNEILQLSIHYDKIDMKNI 429
Query: 144 VVQ-GQGPGPRYGHVMDLVSQRYLVSVSG--NDGKRVLSDAWALDTAQKPYVWQRLNPEG 200
V + P R H +S+ + + G + LSD W D + W +
Sbjct: 430 EVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWSMI---K 484
Query: 201 DRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY 260
R +A + DG L+ GG A L L ++
Sbjct: 485 SLSHTRFRHSACSLPDGNVLILGGVTEGPAML-----LYNVTEEIFKDVTPKDEFFQNSL 539
Query: 261 QHAAVFVGARLH---VTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHG 317
A + + GG + +A + D T
Sbjct: 540 VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATE---------PITVIKKL 590
Query: 318 EHDPSLELMRRCRHASASIGV-RIYIYGGLKGAFCADILLDDFLVAENSPFQSDVNSPLL 376
+H +R I ++ I GG NS D S L
Sbjct: 591 QHPL----FQRYGSQIKYITPRKLLIVGGTSP--------SGLFDRTNSIISLDPLSETL 638
Query: 377 TSERAPTHTGSKVNQTNLGYVTTPTPDG 404
TS + G+ T G
Sbjct: 639 TSIPISRRIWEDHSLMLAGFSLVSTSMG 666
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 52.8 bits (126), Expect = 4e-07
Identities = 25/184 (13%), Positives = 54/184 (29%), Gaps = 34/184 (18%)
Query: 182 WALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMH 241
+ +L E + P R + + +F + G + + L +
Sbjct: 365 SISEINLTVDEDYQL-LECECPINRKFGDVDVAGNDVFYMGGSN---PYRVNEILQLSI- 419
Query: 242 RNGQWEWT---LAPGVAPSPRYQHAAVFVGA--RLHVTGGALRGGRAIEGEAAVAVLDTA 296
+ + ++ P R H + +L + GG + + + + D
Sbjct: 420 HYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGL---SDNWIFDMK 476
Query: 297 AGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIG-VRIYIYGGLKGAFCADIL 355
W S + R RH++ S+ + I GG+ +L
Sbjct: 477 TREW---------SMI-----KSLSH----TRFRHSACSLPDGNVLILGGVTEG--PAML 516
Query: 356 LDDF 359
L +
Sbjct: 517 LYNV 520
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342 | Back alignment and structure |
|---|
Score = 116 bits (290), Expect = 3e-28
Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 21/255 (8%)
Query: 571 EQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYID--YLFLGDYV 628
+I P V D+HGQ+ L+ L + + G+ + + + GD
Sbjct: 57 SEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIF 116
Query: 629 DRGQHSLETITLLLALKIEYPE---NVHLIRGNHEAADINALFGFRLEC---IERMGEND 682
DRG E + + L + + VHL+ GNHE + + + +
Sbjct: 117 DRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP 176
Query: 683 GIWAWTRFNQLFNCLPLAALIEK--KIICMHGGI----GRSIHSVEQIEKLERPITMDAG 736
++ ++ L I K ++ MHGGI ++++ L R A
Sbjct: 177 YNKLYSADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYR-----AN 231
Query: 737 SIILMDLLWSDPTENDSIEGLRP-NARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMD 795
L +D N G P RG TF + + + I+ H +
Sbjct: 232 VDASKKSLKADDLLNFLFFGNGPTWYRGYFSETFTEAELDTILQHFNVNHIVVGH-TSQE 290
Query: 796 GFERFAQGQLITLFS 810
++I + S
Sbjct: 291 RVLGLFHNKVIAVDS 305
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 85.8 bits (212), Expect = 5e-18
Identities = 55/356 (15%), Positives = 85/356 (23%), Gaps = 71/356 (19%)
Query: 25 DAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYD--V 82
+ P P T + + G+ + + D
Sbjct: 5 ETPVPFKSGTGAID------NDTVYIGLGSA------------------GTAWYKLDTQA 40
Query: 83 LTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS----TDDLYVLDLTNDKF 138
+KWT + P PR +A + + GGIG +D++ + +
Sbjct: 41 KDKKWTALAAF--PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN-- 96
Query: 139 KWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP-------- 190
W + + P GHV V G + L+ A K
Sbjct: 97 SWVK--LMSHAPMGMAGHVT-FVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153
Query: 191 ----------YVWQRL----NPEGDR-------PSARMYATASARSDGMFLLCGGRDASG 229
Y + + +P + P A L G G
Sbjct: 154 AHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG 213
Query: 230 APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAA 289
+ L N LAP +P A L GGA G
Sbjct: 214 LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKG----SREN 269
Query: 290 VAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGG 345
A L ++ G + L R S + I GG
Sbjct: 270 YQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL-SQGRAYGVSLPWNNSLLIIGG 324
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 78.1 bits (192), Expect = 2e-15
Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 16/188 (8%)
Query: 72 GVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVL 131
+ +D T++W+ + P A A G G G TD ++ L
Sbjct: 165 FFNKFLLSFDPSTQQWSYAGES--PWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFEL 222
Query: 132 DLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLV----SVSGNDGKRVLSDAWALDTA 187
D T + KW+++ P G + + + G+ +A +
Sbjct: 223 DFTGNNLKWNKLAPVSS-PDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGL 281
Query: 188 QKPYVWQRLNPEGDR-------PSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
+K Y + R Y S + L+ GG A G + D+ + +
Sbjct: 282 KKSYSTDIHLWHNGKWDKSGELSQGRAYG-VSLPWNNSLLIIGGETAGGKAVTDSVLITV 340
Query: 241 HRNGQWEW 248
++ +
Sbjct: 341 -KDNKVTV 347
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 4e-13
Identities = 49/319 (15%), Positives = 82/319 (25%), Gaps = 71/319 (22%)
Query: 13 YRTLETYWDTDEDAPG-PRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLA 71
+ + W PG PR T + L +FGG G T
Sbjct: 38 TQAKDKKWTALAAFPGGPRDQATSAFI------DGNLYVFGGIGKNSEGLTQ-------- 83
Query: 72 GVTNSVHLYDVLTRKWTRIRPAGEPP-------------------------------SPR 100
V N VH Y+ T W ++ +
Sbjct: 84 -VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEA 142
Query: 101 AAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-PRYGHVMD 159
+ A + L D + + W G+ P G +
Sbjct: 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQ--WSYA---GESPWYGTAGAAV- 196
Query: 160 LVSQRYLVSVSGNDGKRVLSDA-WALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGM 218
+ ++G + +DA + LD W +L P + + S+
Sbjct: 197 VNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP--VSSPDGVAGGFAGISNDS 254
Query: 219 FLLCGGRDASGAPLADAYGLLMHRNGQW-------------EWTLAPGVAPSPRYQHAAV 265
+ GG G+ G G +W + G R ++
Sbjct: 255 LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS-GELSQGRAYGVSL 313
Query: 266 FVGARLHVTGGALRGGRAI 284
L + GG GG+A+
Sbjct: 314 PWNNSLLIIGGETAGGKAV 332
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 22/147 (14%)
Query: 11 PSYRTLETY----------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
P RT + W+ P A + + ++F G +G
Sbjct: 212 PGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDS-----LIFAGGAGFKGS 266
Query: 61 ATSSAPGIRLAG----VTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQG 116
+ G A + S ++ KW + GE RA + ++ G
Sbjct: 267 RENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS---GELSQGRAYGVSLPWNNSLLIIG 323
Query: 117 GIGPAGHSTDDLYVLDLTNDKFKWHRV 143
G G + D ++ + ++K +
Sbjct: 324 GETAGGKAVTDSVLITVKDNKVTVQNL 350
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-15
Identities = 46/258 (17%), Positives = 69/258 (26%), Gaps = 44/258 (17%)
Query: 27 PGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK 86
P PRC L + + GG +G +SV YD L+ K
Sbjct: 86 PSPRCLFGLGEA------LNSIYVVGGREIKDGERC-----------LDSVMCYDRLSFK 128
Query: 87 WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ 146
W P P H + +V GG G + + V D + W +
Sbjct: 129 WGESDPL---PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE--WKEL--- 180
Query: 147 GQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSAR 206
R V ++ +G + S A W P R
Sbjct: 181 APMQTARSLFGA-TVHDGRIIVAAGVTDTGLTSSAEVYSITDN--KWAPFEA---FPQER 234
Query: 207 MYATASARSDGMFLLCGGRDASGAPLADAYGLLMH-------RNGQWEWTLAPGVAPSPR 259
+ + G GG + ++ +WE GV
Sbjct: 235 SSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE-----GVLREIA 288
Query: 260 YQHAAVFVGARLHVTGGA 277
Y A F+ RL+V
Sbjct: 289 YAAGATFLPVRLNVLRLT 306
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 57/343 (16%), Positives = 97/343 (28%), Gaps = 68/343 (19%)
Query: 18 TYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSV 77
+ + P+ +L ++ + GG E ++
Sbjct: 24 ECYCASLSSQVPKNHVSLVTK------ENQVFVAGGLFYNEDNKEDP--------MSAYF 69
Query: 78 HLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHST-DDLYVLDLTN 135
+D L +W + P PSPR ++ V G G D + D +
Sbjct: 70 LQFDHLDSEWLGMPP---LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLS 126
Query: 136 DKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG--NDGKRVLSDAWALDTAQKPYVW 193
KW P YGH ++S LV V G ++ L+ D + W
Sbjct: 127 F--KWGES---DPLPYVVYGHT--VLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKF--EW 177
Query: 194 QRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQWEWTLAP 252
+ L P +AR A+ + + G +G A+ Y + + +W
Sbjct: 178 KELAP---MQTARSLFGATVHDGRII-VAAGVTDTGLTSSAEVYSI---TDNKWA-PFEA 229
Query: 253 GVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDT------AAGVWLDRNGL 306
P R + V + L+ GG GE L+ W
Sbjct: 230 --FPQERSSLSLVSLVGTLYAIGG-FATLETESGELVPTELNDIWRYNEEEKKW------ 280
Query: 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGA 349
E + + VR+ + K A
Sbjct: 281 -----------EGVLR---EIAYAAGATFLPVRLNVLRLTKMA 309
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 44/282 (15%), Positives = 76/282 (26%), Gaps = 48/282 (17%)
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDL---YVL 131
YD + + P+ + V GG+ + +D Y L
Sbjct: 13 EGAVAYDPAANECYCASLS--SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFL 70
Query: 132 DLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG---NDGKRVLSDAWALDTAQ 188
+ +W + P PR + + + V G DG+R L D
Sbjct: 71 QFDHLDSEWLGMPPL---PSPRCLFGL-GEALNSIYVVGGREIKDGERCLDSVMCYDRLS 126
Query: 189 KPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADA--YGLLMHRNGQW 246
W +P P T + + + GG+ + L Y + +W
Sbjct: 127 F--KWGESDP---LPYVVYGHTVLSH-MDLVYVIGGKGSDRKCLNKMCVYD---PKKFEW 177
Query: 247 EWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306
+ LAP + R A R+ V G + ++ V W
Sbjct: 178 K-ELAP--MQTARSLFGATVHDGRIIVAAG--VTDTGL--TSSAEVYSITDNKW------ 224
Query: 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348
+ R + S+ +Y GG
Sbjct: 225 -----------APFEAF-PQERSSLSLVSLVGTLYAIGGFAT 254
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Length = 221 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 1e-12
Identities = 43/207 (20%), Positives = 73/207 (35%), Gaps = 41/207 (19%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 648
V GDLHG + +LM D GF + D+ + +GD VDRG ++E + L+
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDN-KKDL----LISVGDLVDRGAENVECLELITFP---- 67
Query: 649 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWT--------------RFNQLF 694
+RGNHE I+ L + N G W + + ++L
Sbjct: 68 --WFRAVRGNHEQMMIDGLSE--RGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELP 123
Query: 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSI 754
+ L +KK + H + + P+ ++W+ ++S
Sbjct: 124 LIIEL-VSKDKKYVICHADYPFDEYEFGK------PVDHQ-------QVIWNRERISNSQ 169
Query: 755 EGLRPNARGPGLVTFGPDRVSDFCKRN 781
G+ +G FG K
Sbjct: 170 NGIVKEIKGADTFIFGHTPAVKPLKFA 196
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Length = 262 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 24/153 (15%)
Query: 572 QIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYL-FLGDYVDR 630
Q + T+ + V + GD+HG L L F + D L +GD V++
Sbjct: 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGS------DTLVAVGDLVNK 59
Query: 631 GQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRF 690
G S + LL L + + GNH+A + + + E + D +
Sbjct: 60 GPDSFGVVRLLKRL------GAYSVLGNHDAKLLKLVKKLGKK--ECLKGRDAKSSLAPL 111
Query: 691 NQ--------LFNCLPLAA-LIEKKIICMHGGI 714
Q + LP + ++ H G+
Sbjct: 112 AQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGL 144
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 45/279 (16%), Positives = 74/279 (26%), Gaps = 44/279 (15%)
Query: 72 GVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVL 131
+ V YD T++W+ R A+ ++ + GG + L
Sbjct: 28 SPIDVVEKYDPKTQEWS---FLPSITRKRRYVASVSLHDRIYVIGGYD-GRSRLSSVECL 83
Query: 132 DL-TNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190
D ++ W+ V R + G DG R + D
Sbjct: 84 DYTADEDGVWYSVAPMNV---RRGLAGA-TTLGDMIYVSGGFDGSRRHTSMERYDPNID- 138
Query: 191 YVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQWEWT 249
W L +AR A G+ GG D + Y G W
Sbjct: 139 -QWSMLGD---MQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKY---DPHTGHWT-N 189
Query: 250 LAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTS 309
+ P + R + ++V GG ++V + W
Sbjct: 190 VTP--MATKRSGAGVALLNDHIYVVGGFDGTAHL----SSVEAYNIRTDSW--------- 234
Query: 310 SRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348
S+ RC + + R+Y G G
Sbjct: 235 --------TTVTSM-TTPRCYVGATVLRGRLYAIAGYDG 264
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 3e-12
Identities = 50/256 (19%), Positives = 76/256 (29%), Gaps = 45/256 (17%)
Query: 97 PSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH 156
PR A ++V GG G D + D +W + R
Sbjct: 3 QGPRTRARLGANEVLLVV-GGFGSQQSPIDVVEKYDPKTQ--EWSFL---PSITRKRRYV 56
Query: 157 ---VMDLVSQRYLVSVSGNDGKRVLSDAWALDTA-QKPYVWQRLNPEGDRPSARMYATAS 212
+ + + G DG+ LS LD + VW + P R A A+
Sbjct: 57 ASVSLH----DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAP---MNVRRGLAGAT 109
Query: 213 ARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLH 272
M + GG D S + + +W++ + + R V ++
Sbjct: 110 T-LGDMIYVSGGFDGSR-RHTSMERYDPNID---QWSMLGDM-QTAREGAGLVVASGVIY 163
Query: 273 VTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHA 332
GG G I +V D G W VT T +R
Sbjct: 164 CLGG--YDGLNI--LNSVEKYDPHTGHWT----NVTPMAT--------------KRSGAG 201
Query: 333 SASIGVRIYIYGGLKG 348
A + IY+ GG G
Sbjct: 202 VALLNDHIYVVGGFDG 217
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 48/274 (17%), Positives = 79/274 (28%), Gaps = 54/274 (19%)
Query: 14 RTLETY------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPG 67
+E Y W R ++ R+ + GG G +
Sbjct: 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSL------HDRIYVIGG----YDGRSRL--- 77
Query: 68 IRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTD 126
+SV D + R A + + V G G H++
Sbjct: 78 -------SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSM 130
Query: 127 DLYVLDLTNDKFKWHRVVVQGQGPGPRYGH---VMDLVSQRYLVSVSGNDGKRVLSDAWA 183
+ Y D D +W + G R G V + + G DG +L+
Sbjct: 131 ERY--DPNID--QWSML---GDMQTAREGAGLVVAS----GVIYCLGGYDGLNILNSVEK 179
Query: 184 LDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHR 242
D W + P + R A + + + GG D + +AY + R
Sbjct: 180 YDPHTG--HWTNVTP---MATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNI---R 230
Query: 243 NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGG 276
W T+ +PR A + RL+ G
Sbjct: 231 TDSWT-TVTS--MTTPRCYVGATVLRGRLYAIAG 261
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 33/204 (16%), Positives = 53/204 (25%), Gaps = 35/204 (17%)
Query: 150 PGPRYGHVMDLVSQRYLVSVSGNDG-KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMY 208
GPR + + L+ V G + + D + W L R Y
Sbjct: 3 QGPRTRARLG--ANEVLLVVGGFGSQQSPIDVVEKYDPKTQ--EWSFLPSI---TRKRRY 55
Query: 209 ATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV 267
+ + + GG D + +G W ++AP R A +
Sbjct: 56 VASVS-LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWY-SVAP--MNVRRGLAGATTL 111
Query: 268 GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMR 327
G ++V+GG G ++ D W +
Sbjct: 112 GDMIYVSGG--FDGS--RRHTSMERYDPNIDQW-----------------SMLGDM-QTA 149
Query: 328 RCRHASASIGVRIYIYGGLKGAFC 351
R IY GG G
Sbjct: 150 REGAGLVVASGVIYCLGGYDGLNI 173
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 47/281 (16%), Positives = 77/281 (27%), Gaps = 51/281 (18%)
Query: 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDL 133
S ++ WT IR P R A +V GG + ++
Sbjct: 23 PQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNV 77
Query: 134 TNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG-NDGKRVLSDAWALDTAQKPYV 192
D W+ + PR ++ + + G G L DT +
Sbjct: 78 VKD--SWYSKLGPPT---PRDSLAA-CAAEGKIYTSGGSEVGNSALYLFECYDTRTE--S 129
Query: 193 WQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL-----ADAYGLLMHRNGQWE 247
W + R +G+ +CGG + + Y W
Sbjct: 130 WHTKPS---MLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVY---DPATETWT 182
Query: 248 WTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLV 307
L P R H VFV ++ GG + G G V D W
Sbjct: 183 -ELCPM--IEARKNHGLVFVKDKIFAVGG--QNGL--GGLDNVEYYDIKLNEW------- 228
Query: 308 TSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348
+ + + A++G +Y+ G +G
Sbjct: 229 ----------KMVSPM-PWKGVTVKCAAVGSIVYVLAGFQG 258
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 42/277 (15%), Positives = 77/277 (27%), Gaps = 59/277 (21%)
Query: 14 RTLETY------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPG 67
++ + W R + + GG
Sbjct: 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVFW------DNVVYILGG----SQLFP----- 68
Query: 68 IRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDD 127
+ Y+V+ W PP+PR + AA A + GG +
Sbjct: 69 ------IKRMDCYNVVKDSWYSKLG---PPTPRDSLAACAAEGKIYTSGGSEVGNSALYL 119
Query: 128 LYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTA 187
D + WH R H M + + + G+ G V L++
Sbjct: 120 FECYDTRTE--SWHTK---PSMLTQRCSHGM-VEANGLIYVCGGSLGNNVSGR--VLNSC 171
Query: 188 QKPYVWQRLNPEGDR-------PSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLL 239
+ +P + AR D +F GG++ G + Y +
Sbjct: 172 ------EVYDPATETWTELCPMIEARKNHGLVFVKDKIF-AVGGQNGLGGLDNVEYYDI- 223
Query: 240 MHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGG 276
+ +W+ ++P P VG+ ++V G
Sbjct: 224 --KLNEWK-MVSP--MPWKGVTVKCAAVGSIVYVLAG 255
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-06
Identities = 34/184 (18%), Positives = 53/184 (28%), Gaps = 33/184 (17%)
Query: 174 GKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233
G + W + R A D + + GG
Sbjct: 19 GGSQPQSCRYFNPKDY--SWTDIRCP---FEKRRDAAC-VFWDNVVYILGGSQLFPIKRM 72
Query: 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVL 293
D Y + W + P+PR AA +++ +GG+ G A+
Sbjct: 73 DCYNV---VKDSWY-SKLG--PPTPRDSLAACAAEGKIYTSGGSEVGNSAL---YLFECY 123
Query: 294 DTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCAD 353
DT W PS+ L +RC H IY+ GG G +
Sbjct: 124 DTRTESW-----------------HTKPSM-LTQRCSHGMVEANGLIYVCGGSLGNNVSG 165
Query: 354 ILLD 357
+L+
Sbjct: 166 RVLN 169
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 40/279 (14%), Positives = 78/279 (27%), Gaps = 47/279 (16%)
Query: 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGH---STDDLYV 130
+ + Y+ W + PR+ A VG ++ GG + + L
Sbjct: 38 LSYLEAYNPSNGTWL---RLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDC 94
Query: 131 LDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190
+ + +W PR + V ++ +V G+ G + + +
Sbjct: 95 YNPMTN--QWSPCAPMSV---PRNRIGV-GVIDGHIYAVGGSHGCIHHNSVERYEPERD- 147
Query: 191 YVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQWEWT 249
W + P + R+ + + + GG D + A+ Y +W
Sbjct: 148 -EWHLVAP---MLTRRIGVGVAV-LNRLLYAVGGFDGTNRLNSAECY---YPERNEWR-M 198
Query: 250 LAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTS 309
+ + R + ++ GG + +V D W
Sbjct: 199 ITA--MNTIRSGAGVCVLHNCIYAAGGYDGQDQL----NSVERYDVETETW--------- 243
Query: 310 SRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348
+ RR RIY+ GG G
Sbjct: 244 --------TFVAPM-KHRRSALGITVHQGRIYVLGGYDG 273
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 3e-12
Identities = 61/298 (20%), Positives = 90/298 (30%), Gaps = 57/298 (19%)
Query: 14 RTLETY------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPG 67
LE Y W D PR G V G L GG G T S
Sbjct: 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV------GGLLYAVGGRNNSPDGNTDS--- 89
Query: 68 IRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTD 126
+++ Y+ +T +W+ P PR + G + G G H++
Sbjct: 90 -------SALDCYNPMTNQWSPCAPM---SVPRNRIGVGVIDGHIYAVGGSHGCIHHNSV 139
Query: 127 DLYVLDLTNDKFKWHRVVVQGQGPGPRYGH---VMDLVSQRYLVSVSGNDGKRVLSDAWA 183
+ Y + D+ WH V R G V++ R L +V G DG L+ A
Sbjct: 140 ERY--EPERDE--WHLV---APMLTRRIGVGVAVLN----RLLYAVGGFDGTNRLNSAEC 188
Query: 184 LDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHR 242
+ W+ + + R A GG D + Y +
Sbjct: 189 YYPERN--EWRMITA---MNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDV---E 239
Query: 243 NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
W +AP R R++V GG G + +V D W
Sbjct: 240 TETWT-FVAP--MKHRRSALGITVHQGRIYVLGG-YDGHTFL---DSVECYDPDTDTW 290
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 44/266 (16%), Positives = 60/266 (22%), Gaps = 48/266 (18%)
Query: 91 RPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150
PR +HA + GG S L + +N W R+
Sbjct: 7 HHHSSGLVPRGSHAPKVGRLIYTA-GGYF--RQSLSYLEAYNPSNGT--WLRL---ADLQ 58
Query: 151 GPRYGHVMDLVSQR-YLV--SVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARM 207
PR G +V Y V + DG S + W P R
Sbjct: 59 VPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCAPM---SVPRN 113
Query: 208 YATASARSDGMFLLCGGRDASGAPLADA--YGLLMHRNGQWEWTLAPGVAPSPRYQHAAV 265
DG GG Y +W +AP + R
Sbjct: 114 RIGVGV-IDGHIYAVGGSHGCI-HHNSVERYE---PERDEWH-LVAP--MLTRRIGVGVA 165
Query: 266 FVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLEL 325
+ L+ GG R + W + T
Sbjct: 166 VLNRLLYAVGGFDGTNRL----NSAECYYPERNEWRMITAMNT----------------- 204
Query: 326 MRRCRHASASIGVRIYIYGGLKGAFC 351
R + IY GG G
Sbjct: 205 -IRSGAGVCVLHNCIYAAGGYDGQDQ 229
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 35/206 (16%), Positives = 64/206 (31%), Gaps = 27/206 (13%)
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLT 134
+SV YD + KW+ ++ P H + M+ GG T+ +++ +
Sbjct: 127 DSVLCYDPVAAKWSEVKN---LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPK 183
Query: 135 NDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQ 194
W + PR + + + +V G + + A D W+
Sbjct: 184 KGD--WKDLA---PMKTPRSMFGV-AIHKGKIVIAGGVTEDGLSASVEAFDLKTN--KWE 235
Query: 195 RLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN-------GQWE 247
+ + P R + + G GG L N + E
Sbjct: 236 VM---TEFPQERSSISLVS-LAGSLYAIGGFA--MIQLESKEFAPTEVNDIWKYEDDKKE 289
Query: 248 WTLAPGVAPSPRYQHAAVFVGARLHV 273
W G+ RY A + RL++
Sbjct: 290 WA---GMLKEIRYASGASCLATRLNL 312
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 52/331 (15%), Positives = 100/331 (30%), Gaps = 61/331 (18%)
Query: 20 WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHL 79
+ T PR ++ ++ + GG E + +
Sbjct: 37 YLTALAEQIPRNHSSIVTQ------QNQVYVVGGLYVDEENKDQP--------LQSYFFQ 82
Query: 80 YDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKF 138
D ++ +W + P PS R V + V G S D + D K
Sbjct: 83 LDNVSSEWVGLPP---LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK- 138
Query: 139 KWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG--NDGKRVLSDAWALDTAQKPYVWQRL 196
W V P YGH ++S ++ G D K+ + + + + W+ L
Sbjct: 139 -WSEV---KNLPIKVYGHN--VISHNGMIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDL 190
Query: 197 NPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQWEWTLAPGVA 255
P + R + + + GG G +A+ L + +WE +
Sbjct: 191 AP---MKTPRSMFGVAIHKGKIVI-AGGVTEDGLSASVEAFDL---KTNKWE-VMTE--F 240
Query: 256 PSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW---LDRNGLVTSSRT 312
P R + V + L+ GG + E A ++ +W D+ +
Sbjct: 241 PQERSSISLVSLAGSLYAIGG-FAMIQLESKEFAPTEVND---IWKYEDDKKEWAGMLK- 295
Query: 313 SKGHGEHDPSLELMRRCRHASASIGVRIYIY 343
R ++ + R+ ++
Sbjct: 296 -------------EIRYASGASCLATRLNLF 313
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 47/294 (15%), Positives = 77/294 (26%), Gaps = 73/294 (24%)
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDD-----LY 129
+ YD + + A PR + V GG+ + D +
Sbjct: 24 TAAVAYDPMENECYLTALA--EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFF 81
Query: 130 VLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGK------RVLSDAWA 183
LD + + W + L S R L + D K + L +
Sbjct: 82 QLDNVSSE--WVGLP--------------PLPSARCLFGLGEVDDKIYVVAGKDLQTEAS 125
Query: 184 LDTAQKPYVWQRLNPEGDR-------PSARMYATASARSDGMFLLCGGRDASGAPLADA- 235
LD+ +P + P + +GM GG+
Sbjct: 126 LDSVL------CYDPVAAKWSEVKNLPIKVYGHNVISH-NGMIYCLGGKTDDKKCTNRVF 178
Query: 236 -YGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLD 294
Y + G W+ LAP +PR ++ + GG + A+V D
Sbjct: 179 IYN---PKKGDWK-DLAP--MKTPRSMFGVAIHKGKIVIAGG--VTEDGLS--ASVEAFD 228
Query: 295 TAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348
W E R + S+ +Y GG
Sbjct: 229 LKTNKW-----------------EVMTEF-PQERSSISLVSLAGSLYAIGGFAM 264
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Length = 280 | Back alignment and structure |
|---|
Score = 64.0 bits (155), Expect = 3e-11
Identities = 38/194 (19%), Positives = 65/194 (33%), Gaps = 17/194 (8%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYL-FLGDYVDRGQHSLETITLLLALKIE 647
+ GD+HG + +L+ L + F D L GD V RG SL+ + + +L
Sbjct: 5 LIGDVHGCYDELIALLHKVEFTPGK------DTLWLTGDLVARGPGSLDVLRYVKSLG-- 56
Query: 648 YPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA--WTRFNQLFNCLPLAALIEK 705
++V L+ GNH+ + G + + A PL + E+
Sbjct: 57 --DSVRLVLGNHDLHLLAVFAGIS-RNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEE 113
Query: 706 KIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLL--WSDPTENDSIEGLRPNARG 763
K + M ++ ++ R + S L N+ LR R
Sbjct: 114 KKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRL 173
Query: 764 PGLV-TFGPDRVSD 776
+ F R
Sbjct: 174 RFITNAFTRMRFCF 187
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 3e-09
Identities = 46/261 (17%), Positives = 75/261 (28%), Gaps = 48/261 (18%)
Query: 98 SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH- 156
S R ++ G G A + + D ++ WH+V + P R
Sbjct: 3 SVRTRLRTPMNLPKLMVVVG-GQAPKAIRSVECYDFKEER--WHQV---AELPSRRCRAG 56
Query: 157 --VMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASAR 214
M + +V G +G + + D + W + R A+
Sbjct: 57 MVYMA----GLVFAVGGFNGSLRVRTVDSYDPVKD--QWTSVAN---MRDRRSTLGAAV- 106
Query: 215 SDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP--SPRYQHAAVFVGARLH 272
+G+ GG D S L+ + N EW VAP + R VG L+
Sbjct: 107 LNGLLYAVGGFDGST-GLSSVEAYNIKSN---EWFH---VAPMNTRRSSVGVGVVGGLLY 159
Query: 273 VTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHA 332
GG + + + V + W + T RR
Sbjct: 160 AVGG--YDVASRQCLSTVECYNATTNEWT----YIAEMST--------------RRSGAG 199
Query: 333 SASIGVRIYIYGGLKGAFCAD 353
+ +Y GG G
Sbjct: 200 VGVLNNLLYAVGGHDGPLVRK 220
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-08
Identities = 57/347 (16%), Positives = 96/347 (27%), Gaps = 90/347 (25%)
Query: 12 SYRTLETY------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSA 65
+ R++E Y W + P RC + + + GG G+
Sbjct: 28 AIRSVECYDFKEERWHQVAELPSRRCRAGMVYM------AGLVFAVGG----FNGSLRV- 76
Query: 66 PGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHS 124
+V YD + +WT + R+ AA + G + G G G S
Sbjct: 77 ---------RTVDSYDPVKDQWTSVAN---MRDRRSTLGAAVLNGLLYAVGGFDGSTGLS 124
Query: 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH---VMDLVSQRYLVSVSGNDGKRVLSDA 181
+ + Y ++ ++ +W V R V+ L +V G D +
Sbjct: 125 SVEAY--NIKSN--EWFHV---APMNTRRSSVGVGVVG----GLLYAVGGYDV----ASR 169
Query: 182 WALDTAQKPYVWQRLNPEGDR-------PSARMYATASARSDGMFLLCGGRDASGA-PLA 233
L T + N + + R A ++ ++ GG D
Sbjct: 170 QCLSTV------ECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLY-AVGGHDGPLVRKSV 222
Query: 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVL 293
+ Y W +A R V L+V GG G + A+V
Sbjct: 223 EVYDP---TTNAWR-QVAD--MNMCRRNAGVCAVNGLLYVVGG-DDGSCNL---ASVEYY 272
Query: 294 DTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRI 340
+ W S R I R+
Sbjct: 273 NPTTDKW-----------------TVVSSCMSTGRSYAGVTVIDKRL 302
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Length = 252 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 3e-06
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYID-YLFLGDYVDRGQHSLETITLLLALKIE 647
V ++ G L + I+ Y LG+ V + E I ++ L +
Sbjct: 6 VLANIAGNLPALTAALSR--IEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKK 63
Query: 648 YPENVHLIRGNHEAADINALF-GFRLECIERMGENDGIWAWTRF 690
ENV +IRG ++ + I+++ + +F
Sbjct: 64 --ENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKF 105
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 4e-05
Identities = 63/455 (13%), Positives = 116/455 (25%), Gaps = 177/455 (38%)
Query: 349 AFCADILLDD--FLVAENSPFQSDVNSPLL-----TSERAPTHTGSKVNQTNLGY-VTTP 400
F ++L + FL+ SP +++ P + +R + NQ Y V+
Sbjct: 81 KFVEEVLRINYKFLM---SPIKTEQRQPSMMTRMYIEQRDRLYND---NQVFAKYNVSRL 134
Query: 401 TPDGLHSPSFGSLSMDKNSMEKLREASAAEAEAANAV-----------WQAAQAASAVPP 449
P KLR+A E A V W A +
Sbjct: 135 QP-----------------YLKLRQA-LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 450 EETSVSDDNSQVAEATSDGSDTEADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESR 509
+ + ++ + + L E + L + + ++ S
Sbjct: 177 QCKM----DFKIFWLNL-KNCNSPETVL---------EMLQKLLYQIDPNWTSRSDHSSN 222
Query: 510 RMIPLNNELSYPTKKFTRQRSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYA 569
+ +++ + + + L ++ L V
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCL---LV------------------LL--NV------ 253
Query: 570 AEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYL------- 622
Q F +L + L+ T D+L
Sbjct: 254 ------QNAKA------WNAF-NLSCKI--LL----------TTRFKQVTDFLSAATTTH 288
Query: 623 FLGDYVDRGQHSLETITLLL-ALKIEY---PENVHLIRGNHEAADIN----ALFGFRLEC 674
D+ E +LLL L P E N ++ +
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR---------EVLTTNPRRLSIIAESIR- 338
Query: 675 IERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLE-R---- 729
DG+ W + + NC L +IE S+ +E E R
Sbjct: 339 -------DGLATWDNWKHV-NCDKLTTIIES--------------SLNVLEPAEYRKMFD 376
Query: 730 ---------PITMDAGSIILMDLLWSDPTENDSIE 755
I L+ L+W D ++D +
Sbjct: 377 RLSVFPPSAHIPTI-----LLSLIWFDVIKSDVMV 406
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} Length = 246 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 5e-05
Identities = 29/131 (22%), Positives = 41/131 (31%), Gaps = 25/131 (19%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 648
+ D+H L + + AG + I LGD V G E + L+ L
Sbjct: 8 IISDVHANLVALEAVLSD------AGRVDDI--WSLGDIVGYGPRPRECVELVRVLA--- 56
Query: 649 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFN------QLFNCLPLAAL 702
+ GNH+ A RL E WT Q LP +
Sbjct: 57 --PNISVIGNHDWA-----CIGRLSLDEFNPVARFASYWTTMQLQAEHLQYLESLPN-RM 108
Query: 703 IEKKIICMHGG 713
I+ +HG
Sbjct: 109 IDGDWTVVHGS 119
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 7e-05
Identities = 43/279 (15%), Positives = 74/279 (26%), Gaps = 38/279 (13%)
Query: 20 WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHL 79
W D R + + G GG+ S + +
Sbjct: 277 WIPGPDMQVARGYQSSA------------TMSDGRVFTIGGSWSGGVF------EKNGEV 318
Query: 80 YDVLTRKWTRIRPAGEPPSPRAAHAA--AAVGTMVVFQGGIG---PAGHSTDDLYVLDLT 134
Y ++ WT + A P A + +F G AG ST +
Sbjct: 319 YSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 378
Query: 135 NDKFK--WHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWAL-------D 185
+ K R +G P G+ + + + + G SDA +
Sbjct: 379 SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGE 438
Query: 186 TAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGL--LMHRN 243
P AR + T+ DG + GG+ ++
Sbjct: 439 PGTSPNTVFAS---NGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVP 495
Query: 244 GQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGG 281
Q + + Y ++ + R+ GG L G
Sbjct: 496 EQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGD 534
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 889 | ||||
| d1jk7a_ | 294 | d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human | 1e-102 | |
| d3c5wc1 | 288 | d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt | 1e-96 | |
| d1auia_ | 473 | d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc | 4e-95 | |
| d1s95a_ | 324 | d.159.1.3 (A:) Serine/threonine protein phosphatas | 4e-91 | |
| d1g5ba_ | 219 | d.159.1.3 (A:) lambda ser/thr protein phosphatase | 1e-14 | |
| d1nnwa_ | 251 | d.159.1.5 (A:) Hypothetical protein PF1291 {Archae | 8e-12 | |
| d1su1a_ | 184 | d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia | 4e-07 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 2e-06 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 3e-04 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 9e-05 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 1e-04 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Score = 318 bits (815), Expect = e-102
Identities = 139/304 (45%), Positives = 189/304 (62%), Gaps = 16/304 (5%)
Query: 537 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 596
II LL R K + L E+ LC + +IF+ +P +L+L AP+K+ GD+HGQ
Sbjct: 6 SIIQRLLEVRGSKP--GKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 63
Query: 597 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 656
+ DL+RLF+ GFP +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+R
Sbjct: 64 YYDLLRLFEYGGFPPE------SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 117
Query: 657 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 716
GNHE A IN ++GF EC R W F FNCLP+AA++++KI C HGG+
Sbjct: 118 GNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 173
Query: 717 SIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSD 776
+ S+EQI ++ RP + + L DLLWSDP ++ + G N RG TFG + V+
Sbjct: 174 DLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVS-FTFGAEVVAK 229
Query: 777 FCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPK 836
F ++ L LI RAH+ V DG+E FA+ QL+TLFSA NYCG +NAGA++ V L+ +
Sbjct: 230 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 289
Query: 837 LIHP 840
++ P
Sbjct: 290 ILKP 293
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 302 bits (775), Expect = 1e-96
Identities = 114/285 (40%), Positives = 159/285 (55%), Gaps = 14/285 (4%)
Query: 558 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 617
L +V LC A++I +E V ++R PV V GD+HGQF DLM LF G
Sbjct: 18 LSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT---- 73
Query: 618 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 677
+YLF+GDYVDRG +S+ET+TLL+ALK+ Y E + ++RGNHE+ I ++GF EC+ +
Sbjct: 74 --NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRK 131
Query: 678 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGS 737
G + W F LF+ LPL AL++ +I C+HGG+ SI +++ I L+R +
Sbjct: 132 YGNAN---VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPH-E 187
Query: 738 IILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGF 797
+ DLLWSDP D G + RG G TFG D F N L L+ RAH+ VM+G+
Sbjct: 188 GPMCDLLWSDP---DDRGGWGISPRGAG-YTFGQDISETFNHANGLTLVSRAHQLVMEGY 243
Query: 798 ERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLP 842
++T+FSA NYC N AI+ + L P P
Sbjct: 244 NWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 288
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Score = 305 bits (782), Expect = 4e-95
Identities = 107/306 (34%), Positives = 154/306 (50%), Gaps = 24/306 (7%)
Query: 558 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 617
L+ + I QE +L + APV V GD+HGQF DLM+LF+ G P+
Sbjct: 43 LEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT---- 98
Query: 618 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 677
YLFLGDYVDRG S+E + L ALKI YP+ + L+RGNHE + F F+ EC +
Sbjct: 99 --RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 156
Query: 678 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGS 737
E + F+CLPLAAL+ ++ +C+HGG+ I++++ I KL+R A
Sbjct: 157 YSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 212
Query: 738 IILMDLLWSDPTENDSIEGLR-----PNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHEC 792
+ D+LWSDP E+ E + RG + V +F + N L I+RAHE
Sbjct: 213 PM-CDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHNNLLSILRAHEA 270
Query: 793 VMDGFERFAQGQ------LITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQ 846
G+ + + Q LIT+FSA NY NN A+L ++ + + + P P
Sbjct: 271 QDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNI-RQFNCSPHPYW 329
Query: 847 SPETSP 852
P
Sbjct: 330 LPNFMD 335
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 289 bits (740), Expect = 4e-91
Identities = 96/297 (32%), Positives = 145/297 (48%), Gaps = 20/297 (6%)
Query: 558 LDSYEVGELCYAAEQIFMQEPTVLQL----RAPVKVFGDLHGQFGDLMRLFDEYGFPSTA 613
L ++ +++ + T+++ + V GD HGQF DL+ +F+ G PS
Sbjct: 29 LHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSET 88
Query: 614 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLE 673
Y+F GD+VDRG S+E I L K+ YP++ HL+RGNHE ++N ++GF E
Sbjct: 89 NP-----YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGE 143
Query: 674 CIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGG-IGRSIHSVEQIEKLERPIT 732
+ + F+++F LPLA I K++ MHGG +++ I K+ER
Sbjct: 144 VKAKYTAQ----MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQ 199
Query: 733 MDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHEC 792
S + DLLWSDP + G + RG FGPD F + N L IIR+HE
Sbjct: 200 -PPDSGPMCDLLWSDPQPQN---GRSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEV 254
Query: 793 VMDGFERFAQGQLITLFSATNYCGTANNAGAILVV-GRGLVVVPKLIHPLPPPLQSP 848
+G+E G+ +T+FSA NYC N + + + G L +P P P
Sbjct: 255 KAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKP 311
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Length = 219 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Score = 71.8 bits (175), Expect = 1e-14
Identities = 42/206 (20%), Positives = 66/206 (32%), Gaps = 39/206 (18%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 648
V GDLHG + +LM D GF + + +GD VDRG ++E + L
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLEL------IT 65
Query: 649 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA----------WTRFNQLFNCLP 698
+RGNHE I+ L + N G W + LP
Sbjct: 66 FPWFRAVRGNHEQMMIDGLSERG--NVNHWLLNGGGWFFNLDYDKEILAKALAHKADELP 123
Query: 699 LA---ALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIE 755
L +KK + H + + ++ +W+ ++S
Sbjct: 124 LIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQV-------------IWNRERISNSQN 170
Query: 756 GLRPNARGPGLVTFGPDRVSDFCKRN 781
G+ +G FG K
Sbjct: 171 GIVKEIKGADTFIFGHTPAVKPLKFA 196
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 64.3 bits (155), Expect = 8e-12
Identities = 23/133 (17%), Positives = 39/133 (29%), Gaps = 9/133 (6%)
Query: 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYID-YLFLGDYVDRGQHSLETITLLLAL 644
V V ++ G L + I+ Y LG+ V + E I ++ L
Sbjct: 2 YVAVLANIAGNLPALTAALSRIEE--MREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDL 59
Query: 645 KIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDG----IWAWTRFNQLFNCLPLA 700
ENV +IRG ++ + E G +T
Sbjct: 60 T--KKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYL 117
Query: 701 ALIEKKIICMHGG 713
+ ++ GG
Sbjct: 118 RDLPIYLVDKIGG 130
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Score = 49.2 bits (116), Expect = 4e-07
Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 16/154 (10%)
Query: 589 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITL----LLAL 644
D+HG R+ + + + LGD ++ G + ++
Sbjct: 6 FASDIHGSLPATERVLELFAQS------GAQWLVILGDVLNHGPRNALPEGYAPAKVVER 59
Query: 645 KIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIE 704
E V +RGN ++ L F + + + + LF L AL +
Sbjct: 60 LNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQ 119
Query: 705 KKIICMHGGIGRSIHSVEQIEKLERPITMDAGSI 738
++ H + E+ + GS+
Sbjct: 120 NDVLVYGHT-----H-LPVAEQRGEIFHFNPGSV 147
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (113), Expect = 2e-06
Identities = 34/275 (12%), Positives = 56/275 (20%), Gaps = 39/275 (14%)
Query: 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDL 133
+ + Y+ W R+ + PR+ A VG ++ GG + D LD
Sbjct: 18 LSYLEAYNPSNGTWLRL---ADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDC 74
Query: 134 TNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVW 193
N + R + V DG
Sbjct: 75 YNPMTNQWS-------------PCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVER 121
Query: 194 QRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPG 253
+ A M T L G + +
Sbjct: 122 YEPERDEWHLVAPML-TRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT 180
Query: 254 VAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTS 313
+ R + ++ GG +
Sbjct: 181 AMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNS----------------------VERYDV 218
Query: 314 KGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348
+ + RR RIY+ GG G
Sbjct: 219 ETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDG 253
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (95), Expect = 3e-04
Identities = 17/101 (16%), Positives = 25/101 (24%), Gaps = 23/101 (22%)
Query: 6 WLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSA 65
L+ Y W R +T R+ + GG
Sbjct: 209 QLNSVERYDVETETWTFVAPMKHRRSALGITVH------QGRIYVLGGYDG--------- 253
Query: 66 PGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAA 106
+SV YD T W+ + S R+ A
Sbjct: 254 -----HTFLDSVECYDPDTDTWSEVTRM---TSGRSGVGVA 286
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 43.3 bits (100), Expect = 9e-05
Identities = 13/126 (10%), Positives = 27/126 (21%), Gaps = 14/126 (11%)
Query: 5 PWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSS 64
A E + T + + GG S+
Sbjct: 259 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST 318
Query: 65 APGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV---GTMVVFQGGIGPA 121
+ +Y + + P R H+ + + G + GG+
Sbjct: 319 P--------VFTPEIYVPEQDTFYKQNP---NSIVRVYHSISLLLPDGRVFNGGGGLCGD 367
Query: 122 GHSTDD 127
+
Sbjct: 368 CTTNHF 373
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 42.9 bits (99), Expect = 1e-04
Identities = 41/325 (12%), Positives = 68/325 (20%), Gaps = 37/325 (11%)
Query: 26 APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTR 85
P AA + T R++++ G + G +D T
Sbjct: 15 IDLPIVPAA----AAIEPTSGRVLMWSSYRNDAFGGSP--------GGITLTSSWDPSTG 62
Query: 86 KWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGH-----STDDLYVLDLTNDKFKW 140
+ + +V GG S+D +
Sbjct: 63 IVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGY 122
Query: 141 HRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEG 200
G G + S W K + +G
Sbjct: 123 QSSATMSDGRVFTIGGSWSGGVFEKNG-----EVYSPSSKTWTSLPNAKVNPMLTADKQG 177
Query: 201 DRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY 260
S +A G G A + +G + + G S R
Sbjct: 178 LYRS-DNHAWLFGWKKGSVFQAGPSTAM---------NWYYTSGSGDVK-SAGKRQSNRG 226
Query: 261 QHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHD 320
G V A++G G + + + TS
Sbjct: 227 VAPDAMCGN--AVMYDAVKGKILTFGGSPDY--QDSDATTNAHIITLGEPGTSPNTVFAS 282
Query: 321 PSLELMRRCRHASASIGVRIYIYGG 345
L R + +I GG
Sbjct: 283 NGLYFARTFHTSVVLPDGSTFITGG 307
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 889 | |||
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 100.0 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 100.0 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 100.0 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.97 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 99.89 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.75 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.4 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.91 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.9 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 98.78 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.65 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.62 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.56 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 97.58 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 97.51 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 97.29 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 97.24 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 97.01 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 96.2 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 94.81 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 91.13 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 90.2 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 85.22 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 84.42 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 83.06 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=100.00 E-value=0 Score=593.88 Aligned_cols=291 Identities=48% Similarity=0.879 Sum_probs=275.7
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999499988899884322599999999999999982099547525985898067899899999999809999999
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~L~~~l~~~g~~~~~~ 614 (889)
+|.+|++|+..+..++.. ...++++++..||++|+++|++||+++++++|++||||||||+.||+++|+..|+|+..
T Consensus 4 id~~i~~l~~~~~~~~~~--~~~l~~~~i~~l~~~a~~i~~~e~~ll~i~~pv~VvGDiHG~~~DL~~if~~~g~p~~~- 80 (294)
T d1jk7a_ 4 IDSIIQRLLEVRGSKPGK--NVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 80 (294)
T ss_dssp HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTSS-
T ss_pred HHHHHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCC-
T ss_conf 899999998425788874--46779999999999999999869987995698599988877747699997416887622-
Q ss_pred CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf 96301499952436899981999999999766089948995278730001210289489998827887502344551212
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|||||||||||++|+||+.+|++||++||++|++||||||...++..|||++||..+|+ ..+|+.++++|
T Consensus 81 -----~ylFLGDYVDRG~~slE~i~lL~aLKi~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~y~----~~i~~~~~~~F 151 (294)
T d1jk7a_ 81 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 151 (294)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHTTSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCC----HHHHHHHHHHH
T ss_conf -----388633446788640689999999996098729981587533301002350068786459----99999999997
Q ss_pred CCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHH
Q ss_conf 77752899908088733887788769777530248832599981122011389999887879654899991278299999
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774 (889)
Q Consensus 695 ~~lP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~ 774 (889)
++||+||+|++++|||||||+|.+.++++|+.+.||.+.+..+ ++.|+|||||.. ...+|.+|+||.| +.||++++
T Consensus 152 ~~LPlaalI~~~i~cvHGGi~~~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~RG~g-~~fg~~~~ 227 (294)
T d1jk7a_ 152 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVLGWGENDRGVS-FTFGAEVV 227 (294)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCHHHHHTCCSSCCCCSSS-HHHHHHHCEECS--SCSSEEECTTSSS-EEECHHHH
T ss_pred HHCCEEEEECCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCC-HHHHHHHCCCCC--CCCCCCCCCCCCC-CCCCHHHH
T ss_conf 4385013775768994476667764534454225888899710-334223227764--4578777999872-34688999
Q ss_pred HHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCC
Q ss_conf 9999865970899800112466079549918999504566799897299999938721996992269
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPL 841 (889)
Q Consensus 775 ~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~ 841 (889)
++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+.+++|+|+
T Consensus 228 ~~Fl~~n~l~~IIR~He~~~~G~~~~~~~~viTiFSa~nY~~~~~N~gail~i~~~~~~~~~~~~p~ 294 (294)
T d1jk7a_ 228 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 294 (294)
T ss_dssp HHHHHHTTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTGGGTCCCCEEEEEECTTSCEEEEEECCC
T ss_pred HHHHHHCCCCEEEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 9999978887799737130178279459929999628876788885379999989980868996689
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=574.46 Aligned_cols=284 Identities=40% Similarity=0.730 Sum_probs=271.2
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999499988899884322599999999999999982099547525985898067899899999999809999999
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~L~~~l~~~g~~~~~~ 614 (889)
+|++|+.+.+.+ .|+++++.+||++|+++|++||+++++++|++|||||||||+||+++|+..+.|+..
T Consensus 5 ~d~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~e~~l~~i~~pv~VvGDlHG~~~DL~~if~~~g~p~~~- 73 (288)
T d3c5wc1 5 LDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT- 73 (288)
T ss_dssp HHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTTS-
T ss_pred HHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCC-
T ss_conf 999999997679----------999999999999999999849987984799699955879999999999846997545-
Q ss_pred CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf 96301499952436899981999999999766089948995278730001210289489998827887502344551212
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||..+|+.. .+|..++++|
T Consensus 74 -----~ylFLGDYVDRG~~slEvl~lL~alKi~~P~~v~lLRGNHE~~~~~~~~gF~~E~~~ky~~~---~i~~~~~~~F 145 (288)
T d3c5wc1 74 -----NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 145 (288)
T ss_dssp -----CEEECSCCCCSSSSHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHHSSS---HHHHHHHHHH
T ss_pred -----EEEECCCCCCCCCCCEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCH---HHHHHHHHHH
T ss_conf -----17704863677876452899999998419874788225776433345667305565415847---9999999998
Q ss_pred CCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHH
Q ss_conf 77752899908088733887788769777530248832599981122011389999887879654899991278299999
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV 774 (889)
Q Consensus 695 ~~lP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~ 774 (889)
++||+||+|++++|||||||+|.+.++++|+.+.||.+.+... +++|+|||||.. ..+|.+|+||.| +.||++++
T Consensus 146 ~~LPlaaiI~~~i~cvHGGi~~~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~---~~~~~~~~rg~g-~~fg~~~~ 220 (288)
T d3c5wc1 146 DYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDIS 220 (288)
T ss_dssp TTSCSEEEETTTEEEESSCCCTTCSSHHHHHHSCCSSSCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHHH
T ss_pred HHCCCEEEECCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCC-CCCCCCCCCCCC---CCCCCCCCCCCE-EECCHHHH
T ss_conf 4164117864707884266567765366686434556797323-343202478665---789764799872-04698999
Q ss_pred HHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCC
Q ss_conf 99998659708998001124660795499189995045667998972999999387219969922699
Q 002713 775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLP 842 (889)
Q Consensus 775 ~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~ 842 (889)
++||++||+++||||||++++||+++++++|||||||||||+.++|.||+|.+++++++++..|+|.|
T Consensus 221 ~~Fl~~n~l~~IIR~He~~~~G~~~~~~~kviTiFSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~p~p 288 (288)
T d3c5wc1 221 ETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 288 (288)
T ss_dssp HHHHHHTTCSEEEECCSCCTTSEEEEGGGTEEEEBCCTTGGGTSCCCEEEEEECTTCCEEEEEECCCC
T ss_pred HHHHHHCCCCEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCC
T ss_conf 99999779838971797688987564799599996698756788854699999899968789971799
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=570.07 Aligned_cols=292 Identities=37% Similarity=0.631 Sum_probs=266.5
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999499988899884322599999999999999982099547525985898067899899999999809999999
Q 002713 535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 614 (889)
Q Consensus 535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~L~~~l~~~g~~~~~~ 614 (889)
.+.+.+.+++.. .|+++++++||++++++|++||+++++++|++|||||||||.||+++|+..|.|+..
T Consensus 30 ~~~l~~hf~~eg----------rl~~~~~l~li~~a~~il~~Epnll~i~~Pv~VvGDIHGq~~DLl~If~~~G~P~~~- 98 (473)
T d1auia_ 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (473)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHHCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCC-
T ss_conf 899999998659----------779999999999999999739985996799899985989999999999973999756-
Q ss_pred CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf 96301499952436899981999999999766089948995278730001210289489998827887502344551212
Q 002713 615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 694 (889)
Q Consensus 615 ~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f 694 (889)
+|||||||||||++|+||+.+|++||++||++|++||||||++.++..|||..||..+|+. .+|+.++++|
T Consensus 99 -----~yLFLGDYVDRG~~SlEvlllL~aLKi~yP~~V~LLRGNHE~~~~n~~ygF~~E~~~ky~~----~iy~~~~~~F 169 (473)
T d1auia_ 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMDAF 169 (473)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----EEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCHHHHHHHHCH----HHHHHHHHHH
T ss_conf -----2883575326775427899999999984887089867898527661454317888875048----9999999985
Q ss_pred CCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCC----CCCCC-CCCCCCCEEEE
Q ss_conf 77752899908088733887788769777530248832599981122011389999887----87965-48999912782
Q 002713 695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDS----IEGLR-PNARGPGLVTF 769 (889)
Q Consensus 695 ~~lP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~----~~~~~-~n~rg~~~~~f 769 (889)
++||+||+|++++|||||||+|.+.++++|+.+.||.+.+..+ +++|+|||||.+... ..+|. .+.||+| +.|
T Consensus 170 ~~LPLAAiI~~kifcVHGGIsp~l~~l~dI~~I~R~~e~p~~~-~~~DLLWSDP~~~~~~~~~~~~~~~ns~RG~g-~~F 247 (473)
T d1auia_ 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (473)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred CCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCC-CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCE-EEE
T ss_conf 1350224314708996146787667234444244556799867-20022111785434666555566667999987-898
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCE------EEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCC
Q ss_conf 99999999986597089980011246607954991------899950456679989729999993872199699226999
Q 002713 770 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQ------LITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP 843 (889)
Q Consensus 770 g~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~------~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~~ 843 (889)
|.+++++||++|++++||||||++++||+++++++ |||||||||||+.++|+||+|+++++ .+.++.|.+.+.
T Consensus 248 G~~a~~~FL~~n~L~~IIR~HE~~~~Gy~~~~~~~~~~~~~viTVFSApnYc~~~nN~aavl~~~~~-~~~i~qf~~~~h 326 (473)
T d1auia_ 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 326 (473)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred CHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCC-CCCEEEECCCCC
T ss_conf 9389999999759968998682445253342388667888789973798767776873687751488-743478437999
Q ss_pred CCCCCC
Q ss_conf 999999
Q 002713 844 PLQSPE 849 (889)
Q Consensus 844 ~~~~~~ 849 (889)
.+..|.
T Consensus 327 p~~~p~ 332 (473)
T d1auia_ 327 PYWLPN 332 (473)
T ss_dssp CCCCGG
T ss_pred CCCCCC
T ss_conf 553444
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=564.94 Aligned_cols=293 Identities=32% Similarity=0.578 Sum_probs=269.8
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC----CCEEEEECCCCCHHHHHHHHH
Q ss_conf 9704799999999499988899884322599999999999999982099547525----985898067899899999999
Q 002713 530 SPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFD 605 (889)
Q Consensus 530 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~----~~i~viGDiHG~~~~L~~~l~ 605 (889)
-..++++.+|+.+...+ .|+..++.+||++++++|++||+++++. +|++|||||||||.||+++|+
T Consensus 11 ~t~~~~~~li~~~~~~~----------~l~~~~~~~ll~~~~~il~~e~~l~~i~~~~~~pv~VvGDiHGq~~DL~~if~ 80 (324)
T d1s95a_ 11 VTISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFE 80 (324)
T ss_dssp CCHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHH
T ss_conf 49999999999998469----------89999999999999999986998599625889977999878889899999999
Q ss_pred HHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHH
Q ss_conf 80999999996301499952436899981999999999766089948995278730001210289489998827887502
Q 002713 606 EYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIW 685 (889)
Q Consensus 606 ~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~ 685 (889)
..|+|+... +|||||||||||++|+||+.+|++||++||++|++||||||...++..|||++||..+|+. .
T Consensus 81 ~~g~p~~~~-----~ylFLGDYVDRG~~slEvi~lL~~lKi~yP~~v~LLRGNHE~~~~n~~ygF~~e~~~k~~~----~ 151 (324)
T d1s95a_ 81 LNGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----Q 151 (324)
T ss_dssp HHCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCH----H
T ss_pred HCCCCCCCC-----EEEEECCCCCCCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCH----H
T ss_conf 779899887-----2899545356767635553899999976887078506776654222235610676643689----9
Q ss_pred HHHHHHHHCCCCCEEEEECCEEEEECCCCC-CCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 344551212777528999080887338877-8876977753024883259998112201138999988787965489999
Q 002713 686 AWTRFNQLFNCLPLAALIEKKIICMHGGIG-RSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGP 764 (889)
Q Consensus 686 ~~~~~~~~f~~lP~aa~i~~~il~vHgGi~-~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~ 764 (889)
+|..++++|++||+||+|++++|||||||+ +.+.++++|+.++||.+.+... +++|+|||||... .+|.++.||.
T Consensus 152 l~~~~~~~F~~LPlaa~I~~~ilcvHGGi~~~~~~~l~~i~~i~r~~~~~~~~-~~~dlLWSDP~~~---~~~~~~~Rg~ 227 (324)
T d1s95a_ 152 MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQPQ---NGRSISKRGV 227 (324)
T ss_dssp HHHHHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSSCCSSS-HHHHHHHCEECSS---SSEEECTTSS
T ss_pred HHHHHHHHHHHCCHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHH-HHHHHHCCCCCCC---CCCCCCCCCC
T ss_conf 99999998864205551058678833776766668799997362777896201-4566640573234---7867689997
Q ss_pred CEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEC-CCCEEEEEEECCCCC
Q ss_conf 1278299999999986597089980011246607954991899950456679989729999993-872199699226999
Q 002713 765 GLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVG-RGLVVVPKLIHPLPP 843 (889)
Q Consensus 765 ~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~-~~~~~~~~~~~~~~~ 843 (889)
| +.||++++++||++||+++||||||++++||+++++++||||||||||||.++|+||+|.++ +++.+.++.|.|.|.
T Consensus 228 g-~~FG~~~~~~Fl~~n~l~lIIR~He~v~~G~~~~~~~kviTvFSa~nY~~~~~N~~a~l~i~~~~~~~~~~~f~~~p~ 306 (324)
T d1s95a_ 228 S-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPH 306 (324)
T ss_dssp S-EEECHHHHHHHHHHHTCCEEEECCSCCTTSEEEEGGGTEEEECCCSSGGGTSCCCEEEEEEETTEEEEEEEEECCCCC
T ss_pred C-CCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCC
T ss_conf 5-776789999999986985899748561476377059929999679764789886669999977985367899147998
Q ss_pred CCC
Q ss_conf 999
Q 002713 844 PLQ 846 (889)
Q Consensus 844 ~~~ 846 (889)
...
T Consensus 307 p~~ 309 (324)
T d1s95a_ 307 PNV 309 (324)
T ss_dssp CSC
T ss_pred CCC
T ss_conf 899
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-40 Score=265.83 Aligned_cols=260 Identities=18% Similarity=0.300 Sum_probs=160.5
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCEEEEECCCCC---C
Q ss_conf 9999999599799999878998754445579489999799959996589999953474379999999999967599---9
Q 002713 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP---A 121 (889)
Q Consensus 45 ~~kiyvfGG~~~~~~~~~~~~~~~~~~~~~~di~~yD~~t~~W~~l~~~g~~P~~R~~hsa~~i~~~Iyv~GG~~~---~ 121 (889)
|+.||||||.... ..+++++||+.+++|++++ ++|.+|++|++++++++||++||... .
T Consensus 4 g~~iyv~GG~~~~---------------~~~~~~~yd~~t~~W~~~~---~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~ 65 (288)
T d1zgka1 4 GRLIYTAGGYFRQ---------------SLSYLEAYNPSNGTWLRLA---DLQVPRSGLAGCVVGGLLYAVGGRNNSPDG 65 (288)
T ss_dssp CCCEEEECCBSSS---------------BCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCEEEETTE
T ss_pred CCEEEEECCCCCC---------------CCCEEEEEECCCCEEEECC---CCCCCCCEEEEEEECCEEEEEECCCCCCCC
T ss_conf 9899998986899---------------8865999989999698899---999865146999999999999586467788
Q ss_pred CCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCC
Q ss_conf 98647389999369912799985359999985122899978969999934899865585899955899732899268999
Q 002713 122 GHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGD 201 (889)
Q Consensus 122 ~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~l~dv~~yd~~t~~~~W~~i~~~~~ 201 (889)
...++++|+||+.+++ |+.+ +++|.+|++|++++.++ ++|++||.++...+++++.|++.++ .|......
T Consensus 66 ~~~~~~~~~yd~~~~~--w~~~---~~~p~~r~~~~~~~~~~-~i~~~gg~~~~~~~~~~~~~~~~~~--~~~~~~~~-- 135 (288)
T d1zgka1 66 NTDSSALDCYNPMTNQ--WSPC---APMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNSVERYEPERD--EWHLVAPM-- 135 (288)
T ss_dssp EEECCCEEEEETTTTE--EEEC---CCCSSCCBTCEEEEETT-EEEEECCEETTEECCCEEEEETTTT--EEEECCCC--
T ss_pred CCCCCHHHHCCCCCCC--CCCC---CCCCCEECCEECCCCCE-EEEEECCEECCCCCCEEEEECCCCC--CCCCCCCC--
T ss_conf 5322301100013464--3111---33311020000234320-3588410103664210000001568--63112322--
Q ss_pred CCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCC
Q ss_conf 99866410899965979999914899999523338996266882699828999998440018999799999994778999
Q 002713 202 RPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGG 281 (889)
Q Consensus 202 ~P~~r~~~sa~~~~d~~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~w~~~~~~~p~~R~~hs~~~~~~~LyV~GG~~~~~ 281 (889)
|.+|..|+++. .++.++++||..... ..++++.|+..+. +|...... +.++..|+++..+++|+++||.....
T Consensus 136 -~~~r~~~~~~~-~~~~~~~~GG~~~~~-~~~~~~~~d~~~~---~~~~~~~~-~~~~~~~~~~~~~~~i~i~GG~~~~~ 208 (288)
T d1zgka1 136 -LTRRIGVGVAV-LNRLLYAVGGFDGTN-RLNSAECYYPERN---EWRMITAM-NTIRSGAGVCVLHNCIYAAGGYDGQD 208 (288)
T ss_dssp -SSCCBSCEEEE-ETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred -CCCCCCCEEEE-EEECCEEECCCCCCC-CCCEEEEEECCCC---CCCCCCCC-CCCCCCCCCCCEEEEEEEECCCCCCC
T ss_conf -10110001212-211104726865343-3422788604553---00000121-24432244410001699854732256
Q ss_pred CCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCEEE
Q ss_conf 98668882999989999089645774566788999999996474344332889979999999478898786432352799
Q 002713 282 RAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGAFCADILLDDFLV 361 (889)
Q Consensus 282 ~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~Lyi~GG~~~~~~~~~~~~d~~~ 361 (889)
. .++.+.||+.+++|..+...+. +|..|++++++++|||+||.++ ...+++++.
T Consensus 209 ~----~~~~~~~~~~~~~~~~~~~~p~------------------~r~~~~~~~~~~~l~v~GG~~~----~~~~~~v~~ 262 (288)
T d1zgka1 209 Q----LNSVERYDVETETWTFVAPMKH------------------RRSALGITVHQGRIYVLGGYDG----HTFLDSVEC 262 (288)
T ss_dssp B----CCCEEEEETTTTEEEECCCCSS------------------CCBSCEEEEETTEEEEECCBCS----SCBCCEEEE
T ss_pred C----CCCEEEEEECCEEEECCCCCCC------------------CCCCEEEEEECCEEEEEECCCC----CEECCEEEE
T ss_conf 4----3520566410100000367667------------------6651489999999999956799----954563999
Q ss_pred CCCC
Q ss_conf 0389
Q 002713 362 AENS 365 (889)
Q Consensus 362 l~~~ 365 (889)
++..
T Consensus 263 yd~~ 266 (288)
T d1zgka1 263 YDPD 266 (288)
T ss_dssp EETT
T ss_pred EECC
T ss_conf 9799
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-40 Score=260.78 Aligned_cols=269 Identities=19% Similarity=0.270 Sum_probs=226.6
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE
Q ss_conf 99898612432154489999875353489964336889999999599799999878998754445579489999799959
Q 002713 8 HPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKW 87 (889)
Q Consensus 8 ~~~~~yd~~~~~w~~~~~~P~pR~ghs~~~i~~~~~~~~kiyvfGG~~~~~~~~~~~~~~~~~~~~~~di~~yD~~t~~W 87 (889)
.....||+.+++|+.++++|.||.+|+++++ +++||||||....... ...++++|+||+.+++|
T Consensus 19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~------~~~iyv~GG~~~~~~~----------~~~~~~~~~yd~~~~~w 82 (288)
T d1zgka1 19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV------GGLLYAVGGRNNSPDG----------NTDSSALDCYNPMTNQW 82 (288)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCEEEETTE----------EEECCCEEEEETTTTEE
T ss_pred CEEEEEECCCCEEEECCCCCCCCCEEEEEEE------CCEEEEEECCCCCCCC----------CCCCCHHHHCCCCCCCC
T ss_conf 6599998999969889999986514699999------9999999586467788----------53223011000134643
Q ss_pred EEECCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEE
Q ss_conf 99658999995347437999999999996759999864738999936991279998535999998512289997896999
Q 002713 88 TRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLV 167 (889)
Q Consensus 88 ~~l~~~g~~P~~R~~hsa~~i~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~ly 167 (889)
+++. .+|.+|+.|+++++++++|++||.. ....+++.+.||+.++. |... ...+..|++|+++...+ .++
T Consensus 83 ~~~~---~~p~~r~~~~~~~~~~~i~~~gg~~-~~~~~~~~~~~~~~~~~--~~~~---~~~~~~r~~~~~~~~~~-~~~ 152 (288)
T d1zgka1 83 SPCA---PMSVPRNRIGVGVIDGHIYAVGGSH-GCIHHNSVERYEPERDE--WHLV---APMLTRRIGVGVAVLNR-LLY 152 (288)
T ss_dssp EECC---CCSSCCBTCEEEEETTEEEEECCEE-TTEECCCEEEEETTTTE--EEEC---CCCSSCCBSCEEEEETT-EEE
T ss_pred CCCC---CCCCEECCEECCCCCEEEEEECCEE-CCCCCCEEEEECCCCCC--CCCC---CCCCCCCCCCEEEEEEE-CCE
T ss_conf 1113---3311020000234320358841010-36642100000015686--3112---32210110001212211-104
Q ss_pred EEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCEEE
Q ss_conf 99348998655858999558997328992689999986641089996597999991489999952333899626688269
Q 002713 168 SVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWE 247 (889)
Q Consensus 168 v~GG~~~~~~l~dv~~yd~~t~~~~W~~i~~~~~~P~~r~~~sa~~~~d~~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~ 247 (889)
++||.+....+++++.||+.++ +|...... +.++..++++ ..++.++++||.+... .+++.+.++..+. +
T Consensus 153 ~~GG~~~~~~~~~~~~~d~~~~--~~~~~~~~---~~~~~~~~~~-~~~~~i~i~GG~~~~~-~~~~~~~~~~~~~---~ 222 (288)
T d1zgka1 153 AVGGFDGTNRLNSAECYYPERN--EWRMITAM---NTIRSGAGVC-VLHNCIYAAGGYDGQD-QLNSVERYDVETE---T 222 (288)
T ss_dssp EECCBCSSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEE-EETTEEEEECCBCSSS-BCCCEEEEETTTT---E
T ss_pred EECCCCCCCCCCEEEEEECCCC--CCCCCCCC---CCCCCCCCCC-CEEEEEEEECCCCCCC-CCCCEEEEEECCE---E
T ss_conf 7268653433422788604553--00000121---2443224441-0001699854732256-4352056641010---0
Q ss_pred EEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98289999984400189997999999947789999866888299998999908964577456678899999999647434
Q 002713 248 WTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMR 327 (889)
Q Consensus 248 w~~~~~~~p~~R~~hs~~~~~~~LyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~ 327 (889)
|..++.. |.+|..|++++++++|||+||.+.... .+++++||+++++|+.+..++. +
T Consensus 223 ~~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~p~------------------~ 279 (288)
T d1zgka1 223 WTFVAPM-KHRRSALGITVHQGRIYVLGGYDGHTF----LDSVECYDPDTDTWSEVTRMTS------------------G 279 (288)
T ss_dssp EEECCCC-SSCCBSCEEEEETTEEEEECCBCSSCB----CCEEEEEETTTTEEEEEEECSS------------------C
T ss_pred EECCCCC-CCCCCCEEEEEECCEEEEEECCCCCEE----CCEEEEEECCCCEEEECCCCCC------------------C
T ss_conf 0003676-676651489999999999956799954----5639999799998988899997------------------7
Q ss_pred CCCEEEEE
Q ss_conf 43328899
Q 002713 328 RCRHASAS 335 (889)
Q Consensus 328 R~~h~~~~ 335 (889)
|.+|++++
T Consensus 280 R~~~~~~~ 287 (288)
T d1zgka1 280 RSGVGVAV 287 (288)
T ss_dssp CBSCEEEE
T ss_pred CEEEEEEE
T ss_conf 57688998
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=100.00 E-value=6.5e-35 Score=230.75 Aligned_cols=306 Identities=15% Similarity=0.128 Sum_probs=208.1
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 99989861243215448999987535348996433688999999959979999987899875444557948999979995
Q 002713 7 LHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK 86 (889)
Q Consensus 7 ~~~~~~yd~~~~~w~~~~~~P~pR~ghs~~~i~~~~~~~~kiyvfGG~~~~~~~~~~~~~~~~~~~~~~di~~yD~~t~~ 86 (889)
.+++|. ..+|+...+.|..|..++++.. ++|||||||......... ......+++||+.+++
T Consensus 2 ~~~~p~----~g~W~~~~~~p~~~~~~a~~~~------~gkv~v~GG~~~~~~~~~--------~~~~~~~~~yd~~t~~ 63 (387)
T d1k3ia3 2 TAPQPG----LGRWGPTIDLPIVPAAAAIEPT------SGRVLMWSSYRNDAFGGS--------PGGITLTSSWDPSTGI 63 (387)
T ss_dssp CCCCTT----SCEEEEEEECSSCCSEEEEETT------TTEEEEEEECCCTTTCSC--------CCSEEEEEEECTTTCC
T ss_pred CCCCCC----CCCCCCCCCCCCCCCEEEEEEE------CCEEEEEEEECCCCCCCC--------CCCEEEEEEEECCCCC
T ss_conf 878897----8716786889861017899925------999999984057666788--------7760689999888896
Q ss_pred EEEECCCCCCCCCCCCCEEEEE-CCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCE
Q ss_conf 9996589999953474379999-999999967599998647389999369912799985359999985122899978969
Q 002713 87 WTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRY 165 (889)
Q Consensus 87 W~~l~~~g~~P~~R~~hsa~~i-~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~ 165 (889)
|+.+..+. .|..+.++++++. +++||++||.+ .+++++||+.+++ |..+ .++|.+|++|++++..++.
T Consensus 64 w~~~~~~~-~~~~~~~~~~~~~~~g~i~v~Gg~~-----~~~~~~yd~~~~~--w~~~---~~~~~~r~~~~~~~~~dG~ 132 (387)
T d1k3ia3 64 VSDRTVTV-TKHDMFCPGISMDGNGQIVVTGGND-----AKKTSLYDSSSDS--WIPG---PDMQVARGYQSSATMSDGR 132 (387)
T ss_dssp BCCCEEEE-CSCCCSSCEEEECTTSCEEEECSSS-----TTCEEEEEGGGTE--EEEC---CCCSSCCSSCEEEECTTSC
T ss_pred EEECCCCC-CCCCCCEEEEEEECCCCEEEEECCC-----CCCEEEECCCCCC--CCCC---CCCCCCCCCCCEEEECCCC
T ss_conf 86667789-8744525689994688689863688-----8621675675574--4215---6566421013035531782
Q ss_pred EEEEECCCC-CCCCCCEEEEECCCCCCEEEECCCCCCCC-----------------------------------------
Q ss_conf 999934899-86558589995589973289926899999-----------------------------------------
Q 002713 166 LVSVSGNDG-KRVLSDAWALDTAQKPYVWQRLNPEGDRP----------------------------------------- 203 (889)
Q Consensus 166 lyv~GG~~~-~~~l~dv~~yd~~t~~~~W~~i~~~~~~P----------------------------------------- 203 (889)
+|++||... ...+++++.||+.++ +|+.++.....+
T Consensus 133 v~v~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~ 210 (387)
T d1k3ia3 133 VFTIGGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTS 210 (387)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECS
T ss_pred EEEECCCCCCCCCCCEEEEECCCCC--CEEECCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEECCCCCCEEECCC
T ss_conf 6652136633354320566348889--55115887644311346651365042269997079877874686774781486
Q ss_pred -------------------CCCCCEEEE-EECCCEEEEECCCCCCCCC----CCCEEEEECCCCCEEEEEECCCCCCCCC
Q ss_conf -------------------866410899-9659799999148999995----2333899626688269982899999844
Q 002713 204 -------------------SARMYATAS-ARSDGMFLLCGGRDASGAP----LADAYGLLMHRNGQWEWTLAPGVAPSPR 259 (889)
Q Consensus 204 -------------------~~r~~~sa~-~~~d~~l~v~GG~~~~~~~----l~d~~~ld~~~~~~W~w~~~~~~~p~~R 259 (889)
..+..+++. ...+++++++||....... ...+..+.......+.|.....+ |.+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r 289 (387)
T d1k3ia3 211 GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL-YFAR 289 (387)
T ss_dssp TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC-SSCC
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCC-CCCC
T ss_conf 667173166556676657632226378861358824788753678877521000001111135678840603665-6654
Q ss_pred CEEEEEEE-CCEEEEECCCCCCCC--CCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 00189997-999999947789999--866888299998999908964577456678899999999647434433288997
Q 002713 260 YQHAAVFV-GARLHVTGGALRGGR--AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASI 336 (889)
Q Consensus 260 ~~hs~~~~-~~~LyV~GG~~~~~~--~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~~ 336 (889)
..|+++++ +++|||+||...... ......++++||+++++|+.+..++. +|.+|+++++
T Consensus 290 ~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~~~~~~~------------------~R~~Hs~a~l 351 (387)
T d1k3ia3 290 TFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI------------------VRVYHSISLL 351 (387)
T ss_dssp BSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS------------------CCCTTEEEEE
T ss_pred CCCEEEECCCCEEEEECCCCCCCCCCCCCEECEEEEEECCCCEEEECCCCCC------------------CCCCEEEEEE
T ss_conf 3433566058749998884567668899470107989799991887889997------------------5531279999
Q ss_pred --CCEEEEECCCCCCCCCCCCCCCEEECC
Q ss_conf --999999947889878643235279903
Q 002713 337 --GVRIYIYGGLKGAFCADILLDDFLVAE 363 (889)
Q Consensus 337 --~~~Lyi~GG~~~~~~~~~~~~d~~~l~ 363 (889)
+++|||+||...... .....++.+++
T Consensus 352 ~~dG~v~v~GG~~~~~~-~~~~~~~e~y~ 379 (387)
T d1k3ia3 352 LPDGRVFNGGGGLCGDC-TTNHFDAQIFT 379 (387)
T ss_dssp CTTSCEEEEECCCCTTC-SCCCCEEEEEE
T ss_pred CCCCEEEEEECCCCCCC-CCCCCEEEEEC
T ss_conf 88999999969876788-86611489982
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.97 E-value=7e-28 Score=187.17 Aligned_cols=147 Identities=16% Similarity=0.113 Sum_probs=68.9
Q ss_pred CCCCCEEEECCCCCCCCCCCCCEEEEECCEEEEECCCCCCC-----CCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCC
Q ss_conf 79995999658999995347437999999999996759999-----8647389999369912799985359999985122
Q 002713 82 VLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAG-----HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH 156 (889)
Q Consensus 82 ~~t~~W~~l~~~g~~P~~R~~hsa~~i~~~Iyv~GG~~~~~-----~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~h 156 (889)
|...+|+... ++|..|..++++..+++||+|||..... .....+++||+.+++ |..... ...+..+..+
T Consensus 6 p~~g~W~~~~---~~p~~~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~~-~~~~~~~~~~ 79 (387)
T d1k3ia3 6 PGLGRWGPTI---DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRTV-TVTKHDMFCP 79 (387)
T ss_dssp TTSCEEEEEE---ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCEE-EECSCCCSSC
T ss_pred CCCCCCCCCC---CCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCC--EEECCC-CCCCCCCCEE
T ss_conf 9787167868---898610178999259999999840576667887760689999888896--866677-8987445256
Q ss_pred EEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEE
Q ss_conf 89997896999993489986558589995589973289926899999866410899965979999914899999523338
Q 002713 157 VMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236 (889)
Q Consensus 157 s~~~~~~~~lyv~GG~~~~~~l~dv~~yd~~t~~~~W~~i~~~~~~P~~r~~~sa~~~~d~~l~v~GG~~~~~~~l~d~~ 236 (889)
+.++..++.+|++||.+. +++++||+.++ +|...+.+ |.+|.+|++++..|+++|++||....+..+++++
T Consensus 80 ~~~~~~~g~i~v~Gg~~~----~~~~~yd~~~~--~w~~~~~~---~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~ 150 (387)
T d1k3ia3 80 GISMDGNGQIVVTGGNDA----KKTSLYDSSSD--SWIPGPDM---QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGE 150 (387)
T ss_dssp EEEECTTSCEEEECSSST----TCEEEEEGGGT--EEEECCCC---SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred EEEEECCCCEEEEECCCC----CCEEEECCCCC--CCCCCCCC---CCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEE
T ss_conf 899946886898636888----62167567557--44215656---6421013035531782665213663335432056
Q ss_pred EEECCCC
Q ss_conf 9962668
Q 002713 237 GLLMHRN 243 (889)
Q Consensus 237 ~ld~~~~ 243 (889)
.|++.++
T Consensus 151 ~yd~~~~ 157 (387)
T d1k3ia3 151 VYSPSSK 157 (387)
T ss_dssp EEETTTT
T ss_pred EECCCCC
T ss_conf 6348889
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=99.89 E-value=2.3e-25 Score=171.55 Aligned_cols=184 Identities=22% Similarity=0.296 Sum_probs=120.3
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH
Q ss_conf 98589806789989999999980999999996301499952436899981999999999766089948995278730001
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 585 ~~i~viGDiHG~~~~L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
.+|+||||||||+++|.++|+.+++++..+ .+||||||||||++|.+|+.+|.. .++++|+||||.+.+
T Consensus 13 ~rI~vIgDIHG~~~~L~~lL~~i~~~~~~d-----~lv~lGD~vDrGp~s~~vl~~l~~------~~~~~i~GNHE~~ll 81 (219)
T d1g5ba_ 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (219)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred CEEEEEEECCCCHHHHHHHHHHCCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHC------CCCCCCCCCHHHHHH
T ss_conf 769999820069999999999739997777-----799948763558547899987314------322244675799999
Q ss_pred HHHCCCHHHHHH-HHCCC-------CCHHHHHHHHHHCCCCCEEEEE---CCEEEEECCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 210289489998-82788-------7502344551212777528999---080887338877887697775302488325
Q 002713 665 NALFGFRLECIE-RMGEN-------DGIWAWTRFNQLFNCLPLAALI---EKKIICMHGGIGRSIHSVEQIEKLERPITM 733 (889)
Q Consensus 665 ~~~~gf~~e~~~-~~~~~-------~~~~~~~~~~~~f~~lP~aa~i---~~~il~vHgGi~~~~~~~~~i~~i~rp~~~ 733 (889)
+...+....... ..+.. ....+...+.+++..+|....+ +.+++++|||+....... ..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~h~~~~~~~~~~------~~~--- 152 (219)
T d1g5ba_ 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYEF------GKP--- 152 (219)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCT------TCC---
T ss_pred HHHHCCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHCC------CCC---
T ss_conf 98745564017887184677615522368999999999857300101257970899979976455322------322---
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCC
Q ss_conf 99981122011389999887879654899991278299999999986597089980011246607954991899950456
Q 002713 734 DAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATN 813 (889)
Q Consensus 734 ~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~ 813 (889)
....+++|+++.......++.+ ...+.+.||.||+++...... + ..|-|-+-.-
T Consensus 153 ----~~~~~~lw~r~~~~~~~~~~~~-------------------~~~~~~~vV~GHt~~~~~~~~--~-~~i~IDtG~~ 206 (219)
T d1g5ba_ 153 ----VDHQQVIWNRERISNSQNGIVK-------------------EIKGADTFIFGHTPAVKPLKF--A-NQMYIDTGAV 206 (219)
T ss_dssp ----CCHHHHHHCCHHHHHHHTTCCC-------------------CCBTSSEEEECSSCCSSCEEE--T-TEEECCCCHH
T ss_pred ----CCHHHHCCCCCCCCCCCCCCCC-------------------CCCCCCEEEECCCCCCCCEEE--C-CEEEEECCCC
T ss_conf ----1233310023342344322222-------------------367998899899178880885--9-9999979827
Q ss_pred C
Q ss_conf 6
Q 002713 814 Y 814 (889)
Q Consensus 814 y 814 (889)
|
T Consensus 207 ~ 207 (219)
T d1g5ba_ 207 F 207 (219)
T ss_dssp H
T ss_pred C
T ss_conf 8
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.75 E-value=4.7e-17 Score=120.03 Aligned_cols=206 Identities=13% Similarity=0.032 Sum_probs=119.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH
Q ss_conf 85898067899899999999809999999963014999524368999819999999997660899489952787300012
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 665 (889)
Q Consensus 586 ~i~viGDiHG~~~~L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 665 (889)
.|.||||||||+..|.++++.+...... ......+||+||+||||+++.||+.+|..|+.. .++++|+||||.+.+.
T Consensus 2 ~I~visDiHg~~~~l~~~l~~i~~~~~~-~~~~D~ii~~GDlvd~G~~~~evi~~l~~l~~~--~~v~~v~GNHD~~~~~ 78 (251)
T d1nnwa_ 2 YVAVLANIAGNLPALTAALSRIEEMREE-GYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKK--ENVKIIRGKYDQIIAM 78 (251)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHT-TCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHH--SCEEEECCHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCC-CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHC--CCEEEEECCHHHHHHH
T ss_conf 8999975024999999999999876316-898868999257479988818999999987630--8989990647788873
Q ss_pred HHCCCHHHHHHHHCCC----------CCHHHHHHHHHHCCCCCEEEEE---CCEEEEECCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 1028948999882788----------7502344551212777528999---08088733887788769777530248832
Q 002713 666 ALFGFRLECIERMGEN----------DGIWAWTRFNQLFNCLPLAALI---EKKIICMHGGIGRSIHSVEQIEKLERPIT 732 (889)
Q Consensus 666 ~~~gf~~e~~~~~~~~----------~~~~~~~~~~~~f~~lP~aa~i---~~~il~vHgGi~~~~~~~~~i~~i~rp~~ 732 (889)
....+........... ....+-....+++..+|..... +.+++++||++......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~p~~~~~~------------ 146 (251)
T d1nnwa_ 79 SDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDG------------ 146 (251)
T ss_dssp SCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTC------------
T ss_pred CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCC------------
T ss_conf 14335553014443156467776677765258888899875131057860797189994586675310------------
Q ss_pred CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHH-HCCCEEEEEECCCCCCCEEEECCCEEEEEECC
Q ss_conf 59998112201138999988787965489999127829999999998-65970899800112466079549918999504
Q 002713 733 MDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCK-RNKLQLIIRAHECVMDGFERFAQGQLITLFSA 811 (889)
Q Consensus 733 ~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~-~~~~~~iir~H~~~~~G~~~~~~~~~itifSa 811 (889)
.+ .|.. ........+. ..+.++++-||.-++.... ..+..+|..=|.
T Consensus 147 -----------~~-~~~~-------------------~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~-~~~~~~in~Gsv 194 (251)
T d1nnwa_ 147 -----------EV-LAEQ-------------------PTSYYEAIMRPVKDYEMLIVASPMYPVDAM-TRYGRVVCPGSV 194 (251)
T ss_dssp -----------CC-CSSC-------------------CHHHHHHHHGGGTTSSEEEESTTCSEEEEE-ETTEEEEEECCS
T ss_pred -----------HH-HHHH-------------------HHHHHHHHCCCCCCCEEEEEECCCEEEEEE-EEEEECCCCCCC
T ss_conf -----------12-1225-------------------788876402545685089981460478888-640011356610
Q ss_pred CCCCCCCCCEEEEEEECC-CCEEEEEEEC
Q ss_conf 566799897299999938-7219969922
Q 002713 812 TNYCGTANNAGAILVVGR-GLVVVPKLIH 839 (889)
Q Consensus 812 ~~y~~~~~n~~a~l~~~~-~~~~~~~~~~ 839 (889)
.+....+..+++++++- +..+.++.+.
T Consensus 195 -g~~~~g~~~~~y~i~d~~~~~~~~~~~~ 222 (251)
T d1nnwa_ 195 -GFPPGKEHKATFALVDVDTLKPKFIEVE 222 (251)
T ss_dssp -SSCSSSSCCEEEEEEETTTCCEEEEEEC
T ss_pred -CCCCCCCCCCEEEEEECCCCEEEEEEEC
T ss_conf -1467899877699998589869999978
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.40 E-value=1.7e-12 Score=91.75 Aligned_cols=216 Identities=11% Similarity=0.009 Sum_probs=110.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH
Q ss_conf 98589806789989999999980999999996301499952436899981999999999766089948995278730001
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 585 ~~i~viGDiHG~~~~L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
..|.++|||||++++|.++++.+.-...+ -+|++||++|+|+.+.++..++..|+.. .-.++.+.||||....
T Consensus 6 ~~i~~~sd~hg~~eale~~~~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~~~L~~~-~~pv~~i~GNHD~~~~ 78 (228)
T d1uf3a_ 6 RYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPIW 78 (228)
T ss_dssp CEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCC------EEEECCCCCCCCCCCHHHHHHHHHHCCC-CCEEEEEECCCCCHHH
T ss_conf 38999957889999999999987661989------9998999999976416899755432034-5369999668874432
Q ss_pred HHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCC---CHHHHHCCCCCCCCCCCCCHHH
Q ss_conf 2102894899988278875023445512127775289990808873388778876---9777530248832599981122
Q 002713 665 NALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIH---SVEQIEKLERPITMDAGSIILM 741 (889)
Q Consensus 665 ~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~lP~aa~i~~~il~vHgGi~~~~~---~~~~i~~i~rp~~~~~~~~~~~ 741 (889)
...... ......... ...... .-.+...+....-.+..+..++....... ..++...+.+........ .
T Consensus 79 ~~~~~~--~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~ 150 (228)
T d1uf3a_ 79 EYLREA--ANVELVHPE-MRNVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDY---P 150 (228)
T ss_dssp HHHHHH--HHHHHHCTT-EEECBT--SEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSC---C
T ss_pred HHHHHH--CCCCCCCCC-CCCCCE--EEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---C
T ss_conf 123553--253213442-100120--34432687799960776556767403343333577899999987532477---6
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCC
Q ss_conf 01138-99998878796548999912782999999999865970899800112466079549918999504566799897
Q 002713 742 DLLWS-DPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANN 820 (889)
Q Consensus 742 dllWs-dp~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n 820 (889)
.++.+ .|.. +.....-|...+.++++..+.++++.||.- .+++. .++..+ +...+-+ .+
T Consensus 151 ~il~~H~p~~------------~~~~~~~~~~~~~~~~~~~~~~lvl~GH~H--~~~~~-~g~~~~-v~pG~~~----~g 210 (228)
T d1uf3a_ 151 KIFLFHTMPY------------HKGLNEQGSHEVAHLIKTHNPLLVLVAGKG--QKHEM-LGASWV-VVPGDLS----EG 210 (228)
T ss_dssp EEEEESSCBC------------BTTTBTTSBHHHHHHHHHHCCSEEEECCSS--CEEEE-ETTEEE-EECCBGG----GT
T ss_pred EEEEEEEECC------------CCCCCCCCCHHHHHHHHHCCCCEEEECCCC--CCHHC-CCCEEE-EECCCCC----CC
T ss_conf 6999840015------------752100040989987874198499984645--66402-098799-9788544----56
Q ss_pred EEEEEEECCCCEEEEE
Q ss_conf 2999999387219969
Q 002713 821 AGAILVVGRGLVVVPK 836 (889)
Q Consensus 821 ~~a~l~~~~~~~~~~~ 836 (889)
.-+++.++.. ++++.
T Consensus 211 ~y~~i~~~~~-~ie~~ 225 (228)
T d1uf3a_ 211 EYSLLDLRAR-KLETG 225 (228)
T ss_dssp EEEEEETTTT-EEEEE
T ss_pred EEEEEECCCC-EEEEE
T ss_conf 0899982598-89988
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.91 E-value=2.4e-10 Score=78.49 Aligned_cols=70 Identities=19% Similarity=0.337 Sum_probs=53.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCH--------HHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 98589806789989999999980999999996301499952436899981--------9999999997660899489952
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS--------LETITLLLALKIEYPENVHLIR 656 (889)
Q Consensus 585 ~~i~viGDiHG~~~~L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s--------~evl~ll~~lk~~~p~~v~llr 656 (889)
.++.|+||+||++.+|.++++.+.....+ .+|++||++|+|+.+ .+++..+..+ ..+++.++
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D------~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~ 71 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEV----AHKVIAVR 71 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT----GGGEEECC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHCCCC------EEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHC----CCCEEEEC
T ss_conf 68999951589989999999988556998------999927602457630344302759999998756----99589964
Q ss_pred CCCCCCHH
Q ss_conf 78730001
Q 002713 657 GNHEAADI 664 (889)
Q Consensus 657 GNHE~~~~ 664 (889)
||||....
T Consensus 72 GNhD~~~~ 79 (184)
T d1su1a_ 72 GNCDSEVD 79 (184)
T ss_dssp CTTCCHHH
T ss_pred CCCCCHHH
T ss_conf 77770455
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.90 E-value=4.4e-08 Score=64.47 Aligned_cols=127 Identities=16% Similarity=0.182 Sum_probs=78.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH
Q ss_conf 85898067899899999999809999999963014999524368999819999999997660899489952787300012
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 665 (889)
Q Consensus 586 ~i~viGDiHG~~~~L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 665 (889)
+|.|++||||++..|.++++.......+ .++++||+++. +++..+..+. ..++.++||||.....
T Consensus 2 kI~iiSDiHgn~~al~~vl~~~~~~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~~~~v~GN~D~~~~~ 66 (165)
T d1s3la_ 2 KIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENLN----ANIIATYGNNDGERCK 66 (165)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGCS----SEEEEECCTTCCCHHH
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHCCCC------EEEECCCCCCH-----HHHHHHHHCC----CCEEEECCCCCCCCHH
T ss_conf 7999985799979999999999866998------99999975578-----8899986347----6089971513543104
Q ss_pred HHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEE--EEC-CEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHC
Q ss_conf 102894899988278875023445512127775289--990-80887338877887697775302488325999811220
Q 002713 666 ALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAA--LIE-KKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMD 742 (889)
Q Consensus 666 ~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~lP~aa--~i~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~d 742 (889)
... ... ....+..+|... .++ .+++++||-.
T Consensus 67 ~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~i~l~Hg~~---------------------------- 100 (165)
T d1s3la_ 67 LKE-----WLK-------------DINEENIIDDFISVEIDDLKFFITHGHH---------------------------- 100 (165)
T ss_dssp HHH-----HHH-------------HHCTTCEEESEEEEEETTEEEEEEESCC----------------------------
T ss_pred HHH-----HHH-------------HHCCCCCCCHHHCEEECCCEEEEEECCC----------------------------
T ss_conf 667-----665-------------4200002772240178893899997994----------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCC
Q ss_conf 1138999988787965489999127829999999998659708998001124660795499
Q 002713 743 LLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQG 803 (889)
Q Consensus 743 llWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~ 803 (889)
.+.++.+.+..+.+.++-||+=. -+.+.. ++
T Consensus 101 ----------------------------~~~~~~~~~~~~~d~v~~GHtH~-~~~~~~-~~ 131 (165)
T d1s3la_ 101 ----------------------------QSVLEMAIKSGLYDVVIYGHTHE-RVFEEV-DD 131 (165)
T ss_dssp ----------------------------HHHHHHHHHHSCCSEEEEECSSC-CEEEEE-TT
T ss_pred ----------------------------CCHHHHHHHCCCCCEEEECCCCC-CEEEEE-CC
T ss_conf ----------------------------21788886447988999898685-059999-99
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.78 E-value=1.8e-07 Score=60.68 Aligned_cols=75 Identities=12% Similarity=0.058 Sum_probs=52.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH----------------------
Q ss_conf 5985898067899899999999809999999963014999524368999819999999----------------------
Q 002713 584 RAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLL---------------------- 641 (889)
Q Consensus 584 ~~~i~viGDiHG~~~~L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll---------------------- 641 (889)
..+|.+++|||++++.|.++++.+.-...+ -+|+.||++|.+..+.+...+.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D------~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~ 75 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETL 75 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCC------EEEEECCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCHHHH
T ss_conf 848999948999978999999988565999------99991555899888889999997542101143102123204569
Q ss_pred ---HHHHHCCCCCEEEECCCCCCCHH
Q ss_conf ---99766089948995278730001
Q 002713 642 ---LALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 642 ---~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
+..-...+-.++++.||||....
T Consensus 76 ~~~~~~L~~~~~pv~~i~GNHD~~~~ 101 (257)
T d2yvta1 76 DKFFREIGELGVKTFVVPGKNDAPLK 101 (257)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSCCHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHH
T ss_conf 99999998539948999477761566
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.65 E-value=4.7e-07 Score=58.07 Aligned_cols=153 Identities=18% Similarity=0.272 Sum_probs=89.6
Q ss_pred EEEEECCCCCHHH------HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
Q ss_conf 5898067899899------9999998099999999630149995243689998199999999976608994899527873
Q 002713 587 VKVFGDLHGQFGD------LMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 660 (889)
Q Consensus 587 i~viGDiHG~~~~------L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE 660 (889)
|.||+|+||+... |.+++...+ .+ .++++||+++ .+++.+|..++ ..++.++||||
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~---vD------~ii~~GDi~~-----~~~l~~l~~l~----~~v~~V~GN~D 67 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDK---IN------YVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGDLD 67 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTT---CC------EEEECSCCCC-----HHHHHHHHHHC----SCEEECCCTTC
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHCCCC---CC------EEEECCCCCC-----HHHHHHHHHHC----CCEEEECCCCC
T ss_conf 9999577888652106699999846589---99------9998999999-----99999988349----98799838877
Q ss_pred CCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEE--CC-EEEEECCCCCCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 0001210289489998827887502344551212777528999--08-08873388778876977753024883259998
Q 002713 661 AADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALI--EK-KIICMHGGIGRSIHSVEQIEKLERPITMDAGS 737 (889)
Q Consensus 661 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~lP~aa~i--~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~ 737 (889)
...... ..++...+|....+ ++ +++++||-...
T Consensus 68 ~~~~~~-----------------------~~~~~~~lp~~~~~~~~~~~i~l~H~~~~~--------------------- 103 (193)
T d2a22a1 68 SAIFNP-----------------------DPESNGVFPEYVVVQIGEFKIGLMHGNQVL--------------------- 103 (193)
T ss_dssp CSCCBC-----------------------CGGGTBCCCSEEEEEETTEEEEEECSTTSS---------------------
T ss_pred CCHHHH-----------------------HHHHHHHCCCCEEEEECCEEEEEEECCCCC---------------------
T ss_conf 201344-----------------------578886499507999888999998136888---------------------
Q ss_pred CHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCC-CCC
Q ss_conf 1122011389999887879654899991278299999999986597089980011246607954991899950456-679
Q 002713 738 IILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATN-YCG 816 (889)
Q Consensus 738 ~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~-y~~ 816 (889)
.| ..++.+.++.+..+.++++-||+-++ ......+..+|.-=|+.. +.+
T Consensus 104 ------~~-----------------------~~~~~l~~~~~~~~~dvvi~GHTH~~-~~~~~~g~~~iNPGSvg~pr~~ 153 (193)
T d2a22a1 104 ------PW-----------------------DDPGSLEQWQRRLDCDILVTGHTHKL-RVFEKNGKLFLNPGTATGAFSA 153 (193)
T ss_dssp ------ST-----------------------TCHHHHHHHHHHHTCSEEEECSSCCC-EEEEETTEEEEECCCSSCCCCT
T ss_pred ------CC-----------------------CCHHHHHHHHHHCCCCEEEECCCCCC-EEEEECCEEEEECCCCCCCCCC
T ss_conf ------89-----------------------88899999876248998998675675-3899999999989977767678
Q ss_pred -CCCC--EEEEEEECCCC
Q ss_conf -9897--29999993872
Q 002713 817 -TANN--AGAILVVGRGL 831 (889)
Q Consensus 817 -~~~n--~~a~l~~~~~~ 831 (889)
..+. .=|++.++++.
T Consensus 154 ~~~~~~~syaild~~~~~ 171 (193)
T d2a22a1 154 LTPDAPPSFMLMALQGNK 171 (193)
T ss_dssp TSTTCCCEEEEEEEETTE
T ss_pred CCCCCCCEEEEEEEECCE
T ss_conf 888988889999998999
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.62 E-value=2e-06 Score=54.24 Aligned_cols=143 Identities=17% Similarity=0.122 Sum_probs=86.6
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH
Q ss_conf 98589806789989999999980999999996301499952436899981999999999766089948995278730001
Q 002713 585 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 585 ~~i~viGDiHG~~~~L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 664 (889)
.+|.|++|+||++..|.++++...- ..+ .++++||++..+...+ . ..++.++||||...
T Consensus 4 ~kI~viSD~Hgn~~al~~vl~~~~~-~~D------~iih~GD~~~~~~~~~-----------~--~~~~~V~GN~D~~~- 62 (173)
T d3ck2a1 4 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSELRPDSPL-----------W--EGIRVVKGNMDFYA- 62 (173)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCSCTTCGG-----------G--TTEEECCCTTCCST-
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHC-CCC------EEEECCCCCCCCCCHH-----------H--CCCEEEECCCCCCC-
T ss_conf 8999996368997999999998655-898------9997885457551045-----------3--68819966742343-
Q ss_pred HHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEE--EEC-CEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHH
Q ss_conf 2102894899988278875023445512127775289--990-8088733887788769777530248832599981122
Q 002713 665 NALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAA--LIE-KKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILM 741 (889)
Q Consensus 665 ~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~lP~aa--~i~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~ 741 (889)
.+|... .++ .+++++||-....
T Consensus 63 -------------------------------~~~~~~~~~~~~~~~~~~Hg~~~~~------------------------ 87 (173)
T d3ck2a1 63 -------------------------------GYPERLVTELGSTKIIQTHGHLFDI------------------------ 87 (173)
T ss_dssp -------------------------------TCCSEEEEEETTEEEEEECSGGGTT------------------------
T ss_pred -------------------------------CCCEEEEEEECCEEEEEEECCCCCC------------------------
T ss_conf -------------------------------3552999997998899994767777------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCC-CCCCCC
Q ss_conf 0113899998878796548999912782999999999865970899800112466079549918999504566-799897
Q 002713 742 DLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNY-CGTANN 820 (889)
Q Consensus 742 dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y-~~~~~n 820 (889)
..+.+.+.++.+..+.+++|.||+=++. .+..-+..+|.-=|...- .+...-
T Consensus 88 --------------------------~~~~~~l~~~~~~~~~dvvi~GHTH~p~-~~~~~~~~~iNPGSvg~pr~~~~~~ 140 (173)
T d3ck2a1 88 --------------------------NFNFQKLDYWAQEEEAAICLYGHLHVPS-AWLEGKILFLNPGSISQPRGTIREC 140 (173)
T ss_dssp --------------------------TTCSHHHHHHHHHTTCSEEECCSSCCEE-EEEETTEEEEEECCSSSCCTTCCSC
T ss_pred --------------------------CCCHHHHHHHHHHCCCCEEEECCCCCCE-EEEECCEEEEECCCCCCCCCCCCCC
T ss_conf --------------------------7898999999875599999968867515-9998999999779987778999877
Q ss_pred EEEEEEECCC
Q ss_conf 2999999387
Q 002713 821 AGAILVVGRG 830 (889)
Q Consensus 821 ~~a~l~~~~~ 830 (889)
.-|++.++++
T Consensus 141 syail~~~~~ 150 (173)
T d3ck2a1 141 LYARVEIDDS 150 (173)
T ss_dssp CEEEEEECSS
T ss_pred EEEEEEEECC
T ss_conf 8999998099
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.56 E-value=2.1e-06 Score=54.12 Aligned_cols=148 Identities=20% Similarity=0.180 Sum_probs=85.0
Q ss_pred CEEEEECCCCCHHH--HHHHHHH-HCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCC
Q ss_conf 85898067899899--9999998-09999999963014999524368999819999999997660899489952787300
Q 002713 586 PVKVFGDLHGQFGD--LMRLFDE-YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 662 (889)
Q Consensus 586 ~i~viGDiHG~~~~--L~~~l~~-~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 662 (889)
+|.||+|+||+... |.+.+.. ......+ .++++||+++ .|++.+|..+. ..++.++||||..
T Consensus 2 kI~viSD~H~~~~~~~l~~~~~~~~~~~~~D------~Ii~~GDi~~-----~e~l~~l~~~~----~~v~~V~GN~D~~ 66 (182)
T d1z2wa1 2 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDEN 66 (182)
T ss_dssp EEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCCC
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHCCCCCC------EEEECCCCCC-----HHHHHHHHHHC----CCEEEEECCCCCC
T ss_conf 8999912588975014689999984535898------8999257653-----45689887528----9659993786766
Q ss_pred HHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEE--C-CEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCH
Q ss_conf 01210289489998827887502344551212777528999--0-80887338877887697775302488325999811
Q 002713 663 DINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALI--E-KKIICMHGGIGRSIHSVEQIEKLERPITMDAGSII 739 (889)
Q Consensus 663 ~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~lP~aa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~ 739 (889)
. .+|...++ + .+++++||-...
T Consensus 67 ~--------------------------------~~p~~~~~~~~g~~i~~~Hg~~~~----------------------- 91 (182)
T d1z2wa1 67 L--------------------------------NYPEQKVVTVGQFKIGLIHGHQVI----------------------- 91 (182)
T ss_dssp T--------------------------------TSCSEEEEEETTEEEEEECSCCCC-----------------------
T ss_pred C--------------------------------CCCEEEEEEECCCEEEEEECCCCC-----------------------
T ss_conf 5--------------------------------422388999869699999688778-----------------------
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCC--C
Q ss_conf 22011389999887879654899991278299999999986597089980011246607954991899950456679--9
Q 002713 740 LMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCG--T 817 (889)
Q Consensus 740 ~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~--~ 817 (889)
| ....+.+.++.+..+.+.++-||+-++ ..+...+..+|.-=|...--+ .
T Consensus 92 --------~-------------------~~~~~~l~~~~~~~~~divi~GHTH~p-~~~~~~~~~~iNPGSv~~pr~~~~ 143 (182)
T d1z2wa1 92 --------P-------------------WGDMASLALLQRQFDVDILISGHTHKF-EAFEHENKFYINPGSATGAYNALE 143 (182)
T ss_dssp --------B-------------------TTCHHHHHHHHHHHSSSEEECCSSCCC-EEEEETTEEEEECCCTTCCCCSSC
T ss_pred --------C-------------------CCCHHHHHHHHHCCCCCEEEECCCCCC-EEEEECCEEEEECCCCCCCCCCCC
T ss_conf --------8-------------------778899999876257997997876763-499989999996998888888888
Q ss_pred CCC--EEEEEEECCCC
Q ss_conf 897--29999993872
Q 002713 818 ANN--AGAILVVGRGL 831 (889)
Q Consensus 818 ~~n--~~a~l~~~~~~ 831 (889)
.+. .=|++.++++.
T Consensus 144 ~~~~~syaild~~~~~ 159 (182)
T d1z2wa1 144 TNIIPSFVLMDIQAST 159 (182)
T ss_dssp SCCCCEEEEEEEETTE
T ss_pred CCCCCEEEEEEEECCE
T ss_conf 8877779999980999
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=97.58 E-value=0.00012 Score=43.28 Aligned_cols=39 Identities=26% Similarity=0.328 Sum_probs=29.0
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCC
Q ss_conf 4999524368999819999999997660899489952787300
Q 002713 620 DYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 662 (889)
Q Consensus 620 ~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 662 (889)
.+++|||+.-+-...-+.+.+|-+|. .+.++|+||||..
T Consensus 46 ~v~~LGD~~~~~~~~~~~~~~l~~L~----g~~~lI~GNHD~~ 84 (188)
T d1xm7a_ 46 TLYHLGDFTWHFNDKNEYLRIWKALP----GRKILVMGNHDKD 84 (188)
T ss_dssp EEEECSCCBSCSCCTTSHHHHHHHSS----SEEEEECCTTCCC
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHCC----CCEEEEECCCCCH
T ss_conf 89994884135787899999999779----9659984577750
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.51 E-value=0.00012 Score=43.18 Aligned_cols=72 Identities=22% Similarity=0.230 Sum_probs=47.1
Q ss_pred CEEEEECCC-C------------CHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH---HCCC
Q ss_conf 858980678-9------------98999999998099999999630149995243689998199999999976---6089
Q 002713 586 PVKVFGDLH-G------------QFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALK---IEYP 649 (889)
Q Consensus 586 ~i~viGDiH-G------------~~~~L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk---~~~p 649 (889)
+++.++|+| | ++..|.++++.+.-...+ -+|+.||++|++.-+.+++..+..+. ...+
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D------~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~ 75 (333)
T d1ii7a_ 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKEHS 75 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 88999237589887673257999999999999999873999------999878988899799999999999976687539
Q ss_pred CCEEEECCCCCCCH
Q ss_conf 94899527873000
Q 002713 650 ENVHLIRGNHEAAD 663 (889)
Q Consensus 650 ~~v~llrGNHE~~~ 663 (889)
-.++++-||||...
T Consensus 76 i~v~~i~GNHD~~~ 89 (333)
T d1ii7a_ 76 IPVFAIEGNHDRTQ 89 (333)
T ss_dssp CCEEEECCTTTCCS
T ss_pred CCEEEECCCCCCCC
T ss_conf 80999678876632
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=97.29 E-value=0.00042 Score=39.81 Aligned_cols=70 Identities=19% Similarity=0.194 Sum_probs=45.8
Q ss_pred CEEEEECCC---------CC---HHHHHHHHHHHCCC--CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 858980678---------99---89999999980999--99999630149995243689998199999999976608994
Q 002713 586 PVKVFGDLH---------GQ---FGDLMRLFDEYGFP--STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPEN 651 (889)
Q Consensus 586 ~i~viGDiH---------G~---~~~L~~~l~~~g~~--~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~ 651 (889)
.|..|+|+| |. ...|.++++.+... ..+ -+|+.||++|+|. .+.+..+..+-.+.+-.
T Consensus 2 ~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D------~vv~~GDl~~~~~--~~~y~~~~~~l~~l~~p 73 (271)
T d3d03a1 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGDIVNCGR--PEEYQVARQILGSLNYP 73 (271)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS------EEEEESCCBSSCC--HHHHHHHHHHHTTCSSC
T ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC------EEEECCCCCCCCC--CHHHHHHHHHHHCCCCC
T ss_conf 899991575798864202676899999999999983589999------9998954672884--22689999987505998
Q ss_pred EEEECCCCCCCH
Q ss_conf 899527873000
Q 002713 652 VHLIRGNHEAAD 663 (889)
Q Consensus 652 v~llrGNHE~~~ 663 (889)
++++.||||...
T Consensus 74 ~~~i~GNHD~~~ 85 (271)
T d3d03a1 74 LYLIPGNHDDKA 85 (271)
T ss_dssp EEEECCTTSCHH
T ss_pred EEEEECCCCCHH
T ss_conf 999936864267
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=97.24 E-value=0.0013 Score=36.81 Aligned_cols=73 Identities=19% Similarity=0.180 Sum_probs=46.4
Q ss_pred CEEEEECCCCC-------------------HHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC----CHHHHHHHHH
Q ss_conf 85898067899-------------------899999999809999999963014999524368999----8199999999
Q 002713 586 PVKVFGDLHGQ-------------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ----HSLETITLLL 642 (889)
Q Consensus 586 ~i~viGDiHG~-------------------~~~L~~~l~~~g~~~~~~~~~~~~~vfLGD~vDrG~----~s~evl~ll~ 642 (889)
++.+++|+|=. ...|.+.++.+.....+ -+|++||++|.+. ...+.+..+.
T Consensus 5 ~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~D------fVv~~GDl~~~~~~~~~~~~~~~~~~~ 78 (320)
T d2nxfa1 5 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTVM 78 (320)
T ss_dssp EEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC------EEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999337888888764445443204677899999999998647989------999889878898731357999999999
Q ss_pred HHHHCCCCCEEEECCCCCCCHH
Q ss_conf 9766089948995278730001
Q 002713 643 ALKIEYPENVHLIRGNHEAADI 664 (889)
Q Consensus 643 ~lk~~~p~~v~llrGNHE~~~~ 664 (889)
..-...+..++.+.||||....
T Consensus 79 ~~~~~~~~p~~~v~GNHD~~~~ 100 (320)
T d2nxfa1 79 AELDACSVDVHHVWGNHEFYNF 100 (320)
T ss_dssp HHHHTTCSEEEECCCHHHHHHC
T ss_pred HHHHHCCCCEEEECCCCCCCCC
T ss_conf 9999759988994046765543
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.01 E-value=0.00085 Score=37.90 Aligned_cols=176 Identities=15% Similarity=0.144 Sum_probs=80.8
Q ss_pred CCEEEEECCCCC------------HHHHHHHHHHHCC--CCCCCCCCEEEEEEECCCCCCCCCH-HH-HHHHHHHHHHCC
Q ss_conf 985898067899------------8999999998099--9999996301499952436899981-99-999999976608
Q 002713 585 APVKVFGDLHGQ------------FGDLMRLFDEYGF--PSTAGDITYIDYLFLGDYVDRGQHS-LE-TITLLLALKIEY 648 (889)
Q Consensus 585 ~~i~viGDiHG~------------~~~L~~~l~~~g~--~~~~~~~~~~~~vfLGD~vDrG~~s-~e-vl~ll~~lk~~~ 648 (889)
-+++.|.|||=. ...|.++++.... +..+ -+|..||+++.|... .+ ...++..+....
T Consensus 5 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD------~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~ 78 (256)
T d2hy1a1 5 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQL 78 (256)
T ss_dssp EEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCS------EEEECSCCBSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 8999996271189886413674889999999999984389999------9998998888887157899999864345405
Q ss_pred CCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECC-EEEEECCCCCCC---CCCHHHH
Q ss_conf 994899527873000121028948999882788750234455121277752899908-088733887788---7697775
Q 002713 649 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGIGRS---IHSVEQI 724 (889)
Q Consensus 649 p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f~~lP~aa~i~~-~il~vHgGi~~~---~~~~~~i 724 (889)
+-.++++.||||... +....+... ... +..+-....+.+ .++.+....... ....+++
T Consensus 79 ~~p~~~v~GNHD~~~---------~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~ 140 (256)
T d2hy1a1 79 GAELVWVMGNHDDRA---------ELRKFLLDE-APS--------MAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQL 140 (256)
T ss_dssp TCEEEECCCTTSCHH---------HHHHHTTCC-CCC--------CSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHH
T ss_pred CCCEEEECCCCCCHH---------HHHHHHCCC-CCC--------CCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHH
T ss_conf 997899766322256---------665421012-234--------56541589704432023311213776773248888
Q ss_pred HCCCCCCCCCCCCCHHHCCCC-CCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 302488325999811220113-899998878796548999912782999999999865970899800112
Q 002713 725 EKLERPITMDAGSIILMDLLW-SDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECV 793 (889)
Q Consensus 725 ~~i~rp~~~~~~~~~~~dllW-sdp~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~~~~iir~H~~~ 793 (889)
+-+++-+........ ++. --|-. .......... ...+...+.+.+++.++++++-||.=.
T Consensus 141 ~wl~~~L~~~~~~~~---iv~~Hhpp~----~~~~~~~~~~--~~~~~~~~~~i~~~~~v~~~~~GH~H~ 201 (256)
T d2hy1a1 141 GWLAEELATPAPDGT---ILALHHPPI----PSVLDMAVTV--ELRDQAALGRVLRGTDVRAILAGHLHY 201 (256)
T ss_dssp HHHHHHHTSCCTTCE---EEECSSCSS----CCSSHHHHTT--SBCCHHHHHHHHTTSSEEEEEECSSSS
T ss_pred HHHHHHHHHHHCCCC---EEEEECCCC----CCCCCCCCCC--CCCCHHHHHHHHHCCCCEEEECCCCCH
T ss_conf 999999876422670---255204885----5454333432--323578899997456924997453563
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=96.20 E-value=0.025 Score=28.79 Aligned_cols=70 Identities=20% Similarity=0.132 Sum_probs=41.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHH-CCCCCCCCCCEEEEEEECCCC-CCCC---CHH---HHHHHHHHHHHCCCCCEEEECC
Q ss_conf 8589806789989999999980-999999996301499952436-8999---819---9999999976608994899527
Q 002713 586 PVKVFGDLHGQFGDLMRLFDEY-GFPSTAGDITYIDYLFLGDYV-DRGQ---HSL---ETITLLLALKIEYPENVHLIRG 657 (889)
Q Consensus 586 ~i~viGDiHG~~~~L~~~l~~~-g~~~~~~~~~~~~~vfLGD~v-DrG~---~s~---evl~ll~~lk~~~p~~v~llrG 657 (889)
++.|+||++........+.... .....+ -+|++||++ +.|. ... +-...+..+....| ++.+.|
T Consensus 9 ~F~v~GD~g~~~~~~~~~~~~~~~~~~pd------fvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P--~~~~~G 80 (312)
T d2qfra2 9 TFGLIGDLGQSFDSNTTLSHYELSPKKGQ------TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQP--WIWTAG 80 (312)
T ss_dssp EEEEECSCCSBHHHHHHHHHHHHCSSCCS------EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EEECCC
T ss_pred EEEEEEECCCCCCHHHHHHHHHHCCCCCC------EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCE--EEEECC
T ss_conf 99999638999854999999997089988------9998988876788865315899999999888764464--898325
Q ss_pred CCCCCH
Q ss_conf 873000
Q 002713 658 NHEAAD 663 (889)
Q Consensus 658 NHE~~~ 663 (889)
|||...
T Consensus 81 NHD~~~ 86 (312)
T d2qfra2 81 NHEIEF 86 (312)
T ss_dssp GGGTCC
T ss_pred CCCCCC
T ss_conf 100255
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.81 E-value=0.0032 Score=34.36 Aligned_cols=26 Identities=8% Similarity=0.124 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 99999999986597089980011246
Q 002713 770 GPDRVSDFCKRNKLQLIIRAHECVMD 795 (889)
Q Consensus 770 g~~~~~~fl~~~~~~~iir~H~~~~~ 795 (889)
-...+.+.|+++++++++-||.-..+
T Consensus 199 ~~~~~~~ll~~~~v~~~~~GH~H~~~ 224 (302)
T d1utea_ 199 LVKQLLPLLTTHKVTAYLCGHDHNLQ 224 (302)
T ss_dssp HHHHTHHHHHHTTCSEEEECSSSSEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCEE
T ss_conf 66666677874595399837973257
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=91.13 E-value=0.29 Score=22.19 Aligned_cols=132 Identities=11% Similarity=0.087 Sum_probs=60.7
Q ss_pred EEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECC----C-CCCCCCCCEEEEECCCEEEEEECCCCCCCC
Q ss_conf 79999999999967599998647389999369912799985359----9-999851228999789699999348998655
Q 002713 104 AAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG----Q-GPGPRYGHVMDLVSQRYLVSVSGNDGKRVL 178 (889)
Q Consensus 104 sa~~i~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g----~-~p~~R~~hs~~~~~~~~lyv~GG~~~~~~l 178 (889)
+=+++++.||+.... ..++.+|..+.+..|+.-.... . .............++ .+|+. ..+
T Consensus 61 tPiv~~g~vyv~t~~-------~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~-~~~----- 126 (560)
T d1kv9a2 61 TPLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGD-KVYVG-TLD----- 126 (560)
T ss_dssp CCEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBT-EEEEE-CTT-----
T ss_pred CCEEECCEEEEECCC-------CEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECC-EEEEE-ECC-----
T ss_conf 999999999997899-------9599996899987988779877644544322465357504688-49997-389-----
Q ss_pred CCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCC-CEEEEEECC
Q ss_conf 85899955899732899268999998664108999659799999148999995233389962668-826998289
Q 002713 179 SDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN-GQWEWTLAP 252 (889)
Q Consensus 179 ~dv~~yd~~t~~~~W~~i~~~~~~P~~r~~~sa~~~~d~~l~v~GG~~~~~~~l~d~~~ld~~~~-~~W~w~~~~ 252 (889)
..++.+|..+....|....... .......+.-.+.++.+++ |+..........+..||..+. ..|++...+
T Consensus 127 g~l~Alda~tG~~~w~~~~~~~--~~~~~~~~~p~v~~~~viv-g~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~ 198 (560)
T d1kv9a2 127 GRLIALDAKTGKAIWSQQTTDP--AKPYSITGAPRVVKGKVII-GNGGAEYGVRGFVSAYDADTGKLAWRFYTVP 198 (560)
T ss_dssp SEEEEEETTTCCEEEEEECSCT--TSSCBCCSCCEEETTEEEE-CCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred CEEEEEECCCCCEEECCCCCCC--CCCEEEEEEEEEECCCCCC-CCCCEECCCCCEEEEEECCCCEEEEEEEECC
T ss_conf 8799997778957730576675--5404543200450685103-6531100135538999778862776641003
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=90.20 E-value=0.35 Score=21.67 Aligned_cols=131 Identities=16% Similarity=0.164 Sum_probs=54.5
Q ss_pred EEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCC-----CCCCCCCEEEEECCCEEEEEECCCCCCCCCC
Q ss_conf 99999999996759999864738999936991279998535999-----9985122899978969999934899865585
Q 002713 106 AAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQG-----PGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180 (889)
Q Consensus 106 ~~i~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~-----p~~R~~hs~~~~~~~~lyv~GG~~~~~~l~d 180 (889)
+++++.||+.... +.++++|..+.+..|+.-...... ..........+..+ .+|+. ..+ ..
T Consensus 74 iv~~g~vyv~t~~-------~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~v~~~-t~~-----g~ 139 (573)
T d1kb0a2 74 VVVDGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKG-KVYVG-AWD-----GR 139 (573)
T ss_dssp EEETTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETT-EEEEE-CTT-----SE
T ss_pred EEECCEEEEECCC-------CEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECC-CEEEE-ECC-----CC
T ss_conf 9999999997899-------9699995899985878679887653333456656665238788-18997-336-----54
Q ss_pred EEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCC-CEEEEEECC
Q ss_conf 899955899732899268999998664108999659799999148999995233389962668-826998289
Q 002713 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN-GQWEWTLAP 252 (889)
Q Consensus 181 v~~yd~~t~~~~W~~i~~~~~~P~~r~~~sa~~~~d~~l~v~GG~~~~~~~l~d~~~ld~~~~-~~W~w~~~~ 252 (889)
++++|..++...|..-...+...... ...+-++.++++++ |+..........+..||..+. ..|+|...+
T Consensus 140 l~alda~tG~~~W~~~~~~~~~~~~~-~~~~p~v~~~~viv-g~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~ 210 (573)
T d1kb0a2 140 LIALDAATGKEVWHQNTFEGQKGSLT-ITGAPRVFKGKVII-GNGGAEYGVRGYITAYDAETGERKWRWFSVP 210 (573)
T ss_dssp EEEEETTTCCEEEEEETTTTCCSSCB-CCSCCEEETTEEEE-CCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred EEEECCCCCCCEECCCCCCCCCCEEE-EECCEEEEECCEEE-EECCCCCCCCCEEEEEECCCCCCEEEEEECC
T ss_conf 06661624300101467568765078-60102797062799-2134455432218998568865102553104
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=85.22 E-value=0.71 Score=19.78 Aligned_cols=15 Identities=20% Similarity=0.301 Sum_probs=8.7
Q ss_pred CCEEEEECCCCCEEE
Q ss_conf 948999979995999
Q 002713 75 NSVHLYDVLTRKWTR 89 (889)
Q Consensus 75 ~di~~yD~~t~~W~~ 89 (889)
..+.++|+.+.+-.+
T Consensus 34 g~v~vWd~~~~~~~~ 48 (299)
T d1nr0a2 34 GHINSWDISTGISNR 48 (299)
T ss_dssp SCEEEEETTTCCEEE
T ss_pred CEEEEEECCCCCEEE
T ss_conf 929999999996889
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=84.42 E-value=0.77 Score=19.56 Aligned_cols=211 Identities=11% Similarity=0.069 Sum_probs=100.5
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEE--CCEEEEECCCCCCC
Q ss_conf 9999999599799999878998754445579489999799959996589999953474379999--99999996759999
Q 002713 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAG 122 (889)
Q Consensus 45 ~~kiyvfGG~~~~~~~~~~~~~~~~~~~~~~di~~yD~~t~~W~~l~~~g~~P~~R~~hsa~~i--~~~Iyv~GG~~~~~ 122 (889)
++.+|+.......... ..+.++++|+.+..+..+.........-.-+.++.. ++.+|+..+.
T Consensus 28 dG~ly~~~~~~~~~~~------------~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~---- 91 (314)
T d1pjxa_ 28 NGDFYIVAPEVEVNGK------------PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR---- 91 (314)
T ss_dssp TSCEEEEETTCEETTE------------ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----
T ss_pred CCCEEEEECCCCCCCC------------CCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECC----
T ss_conf 9999999875402345------------299999998999959999777655678853069990799989999779----
Q ss_pred CCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECC--C--------CCCCCCCEEEEECCCCCCE
Q ss_conf 86473899993699127999853599999851228999789699999348--9--------9865585899955899732
Q 002713 123 HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGN--D--------GKRVLSDAWALDTAQKPYV 192 (889)
Q Consensus 123 ~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~--~--------~~~~l~dv~~yd~~t~~~~ 192 (889)
+.+.++|+.... ...+.........+.-...++..++.+|+..-. . .......+|+++... .
T Consensus 92 ---~~i~~~~~~g~~--~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg---~ 163 (314)
T d1pjxa_ 92 ---LGLLVVQTDGTF--EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG---Q 163 (314)
T ss_dssp ---TEEEEEETTSCE--EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS---C
T ss_pred ---CEEEEEECCCCE--EEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEEEECC---C
T ss_conf ---839999477747--99973343245457872789888998999148667543201100026884389995257---4
Q ss_pred EEECCCCCCCCCCCCCEEEEEEC-CC---EEEEECCCCCCCCCCCCEEEEECCCCCEEE----EEECCCCCCCCCCEEEE
Q ss_conf 89926899999866410899965-97---999991489999952333899626688269----98289999984400189
Q 002713 193 WQRLNPEGDRPSARMYATASARS-DG---MFLLCGGRDASGAPLADAYGLLMHRNGQWE----WTLAPGVAPSPRYQHAA 264 (889)
Q Consensus 193 W~~i~~~~~~P~~r~~~sa~~~~-d~---~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~----w~~~~~~~p~~R~~hs~ 264 (889)
+..+... ...| ..-+.... ++ .||+..- ....+|.|+...++.-. +...++.. .. .--++
T Consensus 164 ~~~~~~~--~~~p--NGi~~~~d~d~~~~~lyv~d~------~~~~i~~~d~~~~g~~~~~~~~~~~~~~~-~~-~pdGi 231 (314)
T d1pjxa_ 164 MIQVDTA--FQFP--NGIAVRHMNDGRPYQLIVAET------PTKKLWSYDIKGPAKIENKKVWGHIPGTH-EG-GADGM 231 (314)
T ss_dssp EEEEEEE--ESSE--EEEEEEECTTSCEEEEEEEET------TTTEEEEEEEEETTEEEEEEEEEECCCCS-SC-EEEEE
T ss_pred EEEEECC--CCEE--EEEEECCCCCCCEEEEEEEEE------CCCCEEEEECCCCCCCCEEEEEEECCCCC-CC-CCEEE
T ss_conf 0375078--5322--136997887763037999860------24311776116765430156899713356-66-41025
Q ss_pred EE-ECCEEEEECCCCCCCCCCCCCCCEEEEECCCCEE
Q ss_conf 99-7999999947789999866888299998999908
Q 002713 265 VF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (889)
Q Consensus 265 ~~-~~~~LyV~GG~~~~~~~~~~~~~v~~yD~~t~~W 300 (889)
++ .++.|||..-. .+.|++||+++...
T Consensus 232 avD~~GnlyVa~~~---------~g~I~~~dp~~g~~ 259 (314)
T d1pjxa_ 232 DFDEDNNLLVANWG---------SSHIEVFGPDGGQP 259 (314)
T ss_dssp EEBTTCCEEEEEET---------TTEEEEECTTCBSC
T ss_pred EEECCCCEEEEECC---------CCEEEEEECCCCEE
T ss_conf 78347857999827---------99999996999979
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=83.06 E-value=0.88 Score=19.21 Aligned_cols=53 Identities=17% Similarity=0.098 Sum_probs=23.7
Q ss_pred CCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEE--CCEEEEECCCCCCCCCCCCEEEEECCCCCE
Q ss_conf 9489999799959996589999953474379999--999999967599998647389999369912
Q 002713 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKF 138 (889)
Q Consensus 75 ~di~~yD~~t~~W~~l~~~g~~P~~R~~hsa~~i--~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~ 138 (889)
+.++++|..+..-.++-. + ....-.++.+ ++..++.|+. ...+.+||+.+...
T Consensus 38 ~~v~i~~~~~~~~~~~~~-~----H~~~v~~~~~sp~g~~latg~~------dg~i~iwd~~~~~~ 92 (311)
T d1nr0a1 38 TSVYTVPVGSLTDTEIYT-E----HSHQTTVAKTSPSGYYCASGDV------HGNVRIWDTTQTTH 92 (311)
T ss_dssp TEEEEEETTCSSCCEEEC-C----CSSCEEEEEECTTSSEEEEEET------TSEEEEEESSSTTC
T ss_pred CEEEEEECCCCCEEEEEC-C----CCCCEEEEEEECCCCEEECCCC------CCEEEEEEEECCCC
T ss_conf 999999999996617974-7----8888899999489996722556------73674663101111
|