Citrus Sinensis ID: 002735


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------
MYREAREISIRNATKANAGGQTLKYMDSPRPLQQPKSFKSRDSSQIESFRVLAKLREAPWSPNERKDRFAAKDAPRFSYDGRESRESIKSTIKLKELPRLSLDSKVHSMRGSTTEMKSNYLLGDMQRVNGNSSILNQQQEPGSNKRPSSLIAKLMGLEAFPDSTSTNRNQPNQNESLPDVQFDVISGLSKTTLKNKQNQTSGSPRNSIKEPVSPRIKNANSVKKPTSSSKFPIEPAPWKQQEGSKGQTPASLSQETPTRASNSFLSVYGEIEKRLAQLEFKKSGKDLRTLKQILEAMQKTKEILESREEDQASSFASQTGDNNRVDPSSILANSDNLKRGNPTSTKTKRICSPKGFRSPIVVMKAAKSIEKNSNPASSAIQNESLSGYQCRAGRKESVEKRTKDPTQRSNYLQDPSSRPIHLTNKDTRAKSLRLGQTSKSSHPTTGKTNSRKCSESLNPRLEHKELKLENQSHSRTPSSDLSRSRRQHMESGPPQRQSRSKSQHLGQSDDQLSDISVNVRYLTHQGDASSLQSGSYISMGSYVGSEVSSTDRSDKISGAFFLQHGPTVRYPAAGYIGDKSTAEPGIAGPEQPSPVSVLEATFYRDEPPSPVRKISHAFTDDEAEWSPVDLNHIANCRKARFGSANDYNKLQNMKHLDQNDMHINPTHEKSITDEIAPNFESTDPNHRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDLHKGKKITNAEPNTKKAQRKLVFDAVNEILVHKLVLQESSKKWFSPSKLARGRSSGEQLLRDLCSEVDCLQANNSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISEIVRDETGSLQGHPGRHCRQLFSK
ccccccccccccHHHHcccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccEEEcHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
cccccccEEEEEcccHHHcccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccHcccccccHHcHHccccccccccEEEcccccccccccccccccccccccccccccHcccccccccccccccHHccHHHHHHHHHHHHHHHcccccccccHHHHHHccccccccHHHHHHHHHHHcHHHHccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHccHccccccccHHHHHHHHHHHcccccccccccHcccHEHHHHHHHHHHHHHHHHHHHHHHHcccccccccEcccc
MYREAREISIRNatkanaggqtlkymdsprplqqpksfksrdssQIESFRVLAKLreapwspnerkdrfaakdaprfsydgresresIKSTiklkelprlsldskvhsmrgsttemKSNYLLGDmqrvngnssilnqqqepgsnkrpsSLIAKLMgleafpdststnrnqpnqneslpdvqFDVISGLSKttlknkqnqtsgsprnsikepvspriknansvkkptssskfpiepapwkqqegskgqtpaslsqetptrasNSFLSVYGEIEKRLAQLEFKKSGKDLRTLKQILEAMQKTKEILESReedqassfasqtgdnnrvdpssilansdnlkrgnptstktkricspkgfrspIVVMKAAKSieknsnpassaiqneslsgyqcragrkesvekrtkdptqrsnylqdpssrpihltnkdtrakslrlgqtsksshpttgktnsrkcseslnprlehkelklenqshsrtpssdlsrsrrqhmesgppqrqsrsksqhlgqsddqlsdISVNVRYLthqgdasslqsgsyismgsyvgsevsstdrsdkisgafflqhgptvrypaagyigdkstaepgiagpeqpspvsvleatfyrdeppspvrkishaftddeaewspvdlnHIANCRkarfgsandynklqnmkhldqndmhinptheksitdeiapnfestdpnhRYISEILLASGFLRDFEADFmniklnpsghlinpnlFFILEQTKACirlpndlhkgkkitnaepntkKAQRKLVFDAVNEILVHKLVLQesskkwfspsklargrssGEQLLRDLCSEVdclqannsncnldgdddsmTSIIWKDLkhgstdwtncssEITWLVLDVERLIFKDLISEIVRdetgslqghpgrhcrqlfsk
myreareisirnatkanaggqtlkymdsprplqqpksfksrdssqIESFRVLAklreapwspnerkdrfaakdaprfsydgresresikstiklkelprlsldskvhsmrgstteMKSNYLLGDMQRVNGNSSIlnqqqepgsnKRPSSLIAKLMGLEAFPDSTSTNRNQPNQNESLPDVQFDVISGLSKttlknkqnqtsgsprnsikepvspriknansvkkptssskfpiepapwkqqegskgqtpaslsqetptrasNSFLSVYGEIEKRLAQLefkksgkdlrTLKQILEAMQKTKEILESREEDQAssfasqtgdnnrvdpssilansdnlkrgnptstktkricspkgfrsPIVVMKAAKsieknsnpassaiqneslsgyqcRAGRKesvekrtkdptqrsnylqdpssrpihltnkdtrakslrlgqtsksshpttgktnsrkcseslnprlehkelklenqshsrtpssdlsrsrRQHMEsgppqrqsrsksqhlgqSDDQLSDISVNVRYLTHQGDASSLQSGSYISMGSYVGSEVSSTDRSDKISGAFFLQHGPTVRYPAAGYIGDKSTAEPGIAGPEQPSPVSVLEATFYRDEPPSPVRKISHAFTDDEAEWSPVDLNHIANCRKARFGSANDYNKLQNMKHLDQNDMHINPTHEKSITDEIAPNFESTDPNHRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDlhkgkkitnaepntkkaQRKLVFDAVNEILVHKLvlqesskkwfspsklargrsSGEQLLRDLCSEVDCLQAnnsncnldgdddSMTSIIWKDLKhgstdwtncSSEITWLVLDVERLIFKDLISEIVRdetgslqghpgrhcrqlfsk
MYREAREISIRNATKANAGGQTLKYMDSPRPLQQPKSFKSRDSSQIESFRVLAKLREAPWSPNERKDRFAAKDAPRFSYDGRESRESIKSTIKLKELPRLSLDSKVHSMRGSTTEMKSNYLLGDMQRVNGNSSILNQQQEPGSNKRPSSLIAKLMGLEAFPDSTSTNRNQPNQNESLPDVQFDVISGLSKTTLKNKQNQTSGSPRNSIKEPVSPRIKNANSVKKPTSSSKFPIEPAPWKQQEGSKGQTPASLSQETPTRASNSFLSVYGEIEKRLAQLEFKKSGKDLRTLKQILEAMQKTKEILESREEDQASSFASQTGDNNRVDPSSILANSDNLKRGNPTSTKTKRICSPKGFRSPIVVMKAAKSIEKNSNPASSAIQNESLSGYQCRAGRKESVEKRTKDPTQRSNYLQDPSSRPIHLTNKDTRAKSLRLGQTSKSSHPTTGKTNSRKCSESLNPRLEHKELKLENQSHSRTPSSDLSRSRRQHMESGPPQRQSRSKSQHLGQSDDQLSDISVNVRYLTHQGDASSLQSGSYISMGSYVGSEVSSTDRSDKISGAFFLQHGPTVRYPAAGYIGDKSTAEPGIAGPEQPSPVSVLEATFYRDEPPSPVRKISHAFTDDEAEWSPVDLNHIANCRKARFGSANDYNKLQNMKHLDQNDMHINPTHEKSITDEIAPNFESTDPNHRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDLHKGKKITNAEPNTKKAQRKLVFDAVNEILVHKLVLQESSKKWFSPSKLARGRSSGEQLLRDLCSEVDCLQANNSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISEIVRDETGSLQGHPGRHCRQLFSK
************************************************************************************************************************************************************************************************************************************************************************LSVYGEIEKRLAQL***********************************************************************************************************************************************************************************************************************************************NVRYL*********************************ISGAFFLQHGPTVRYPAAGYIG*********************************************AEWSPVDLNHIANCRKARFGSA*****************************************HRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDLHK***************RKLVFDAVNEILVHKLVLQES**KW***************LLRDLCSEVDCLQANNSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISEIVRD*******************
****AREIS**********************************************************************************************************************************************AKLMGLEA**************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************NFESTDPNHRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRL*****************KKAQRKLVFDAVNEILVHKLVLQESSKKW***************LLRDLCSEVDCLQANNS*****GDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISEIVRDETGSLQ**PGRHCRQLF**
********SIRNATKANAGGQTLKYMDSPR****************ESFRVLAKLREAPWSPNERKDRFAAKDAPRFS*********IKSTIKLKELPRLSLDSKVHSMRGSTTEMKSNYLLGDMQRVNGNSSILN***********SSLIAKLMGLEAFPDSTSTNRNQPNQNESLPDVQFDVISGLSKTTL*******************SPRIK**************PIEPA**********************RASNSFLSVYGEIEKRLAQLEFKKSGKDLRTLKQILEAMQKTKEIL******************NRVDPSSILANSDNLKRGNPTSTKTKRICSPKGFRSPIVVMKAAKS************QNESL****************************DPSSRPIHLTNKDTRAKSLR**********************SLNPRLEHKELKL*****************************************DQLSDISVNVRYLTHQGDASSLQSGSYISMGSY**********SDKISGAFFLQHGPTVRYPAAGYIGDKSTAEPGIAGPEQPSPVSVLEATFYRDEPPSPVRKISHAFTDDEAEWSPVDLNHIANCRKARFGSANDYNKLQNMKHLDQNDMHINPTHEKSITDEIAPNFESTDPNHRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDLHKGKKITNAEPNTKKAQRKLVFDAVNEILVHKLVLQESSKKWFSPSKLARGRSSGEQLLRDLCSEVDCLQANNSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISEIVRDETG****************
*****REISIRNATKAN*********DSP*PLQQ******RDSSQIESFRVLAKLRE*************************************************************************************************************************************************************************************************************SFLSVYGEIEKRLAQLEFKKSGKDLRTLKQILEAMQKTKEI*****************************************************RSPIVV*KAAKS******************************************************************************************************************************************************************************************************************************QPSPVSVLEATFYRDEPP*******************************RFGS*NDYNKLQNMKHLDQNDMHINPTHEKSITDEIAPNFESTDPNHRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKA******************PNTKKAQRKLVFDAVNEILVHKLVLQESSKKWFSPSKLARGRSSGEQLLRDLCSEVDCLQANNSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISEIVRDETGSLQ*************
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MYREAREISIRNATKANAGGQTLKYMDSPRPLQQPKSFKSRDSSQIESFRVLAKLREAPWSPNERKDRFAAKDAPRFSYDGRESRESIKSTIKLKELPRLSLDSKVHSMRGSTTEMKSNYLLGDMQRVNGNSSILNQQQEPGSNKRPSSLIAKLMGLEAFPDSTSTNRNQPNQNESLPDVQFDVISGLSKTTLKNKQNQTSGSPRNSIKEPVSPRIKNANSVKKPTSSSKFPIEPAPWKQQEGSKGQTPASLSQETPTRASNSFLSVYGEIEKRLAQLEFKKSGKDxxxxxxxxxxxxxxxxxxxxxxxxQASSFASQTGDNNRVDPSSILANSDNLKRGNPTSTKTKRICSPKGFRSPIVVMKAAKSIEKNSNPASSAIQNESLSGYQCRAGRKESVEKRTKDPTQRSNYLQDPSSRPIHLTNKDTRAKSLRLGQTSKSSHPTTGKTNSRKCSESLNPRLEHKELKLENQSHSRTPSSDLSRSRRQHMESGPPQRQSRSKSQHLGQSDDQLSDISVNVRYLTHQGDASSLQSGSYISMGSYVGSEVSSTDRSDKISGAFFLQHGPTVRYPAAGYIGDKSTAEPGIAGPEQPSPVSVLEATFYRDEPPSPVRKISHAFTDDEAEWSPVDLNHIANCRKARFGSANDYNKLQNMKHLDQNDMHINPTHEKSITDEIAPNFESTDPNHRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDLHKGKKITNAEPNTKKAQRKLVFDAVNEILVHKLVLQESSKKWFSPSKLARGRSSGEQLLRDLCSEVDCLQANNSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISEIVRDETGSLQGHPGRHCRQLFSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query887 2.2.26 [Sep-21-2011]
Q9LF24927 Protein LONGIFOLIA 1 OS=A no no 0.780 0.746 0.351 9e-96
Q9S823905 Protein LONGIFOLIA 2 OS=A no no 0.757 0.742 0.347 5e-91
>sp|Q9LF24|LNG1_ARATH Protein LONGIFOLIA 1 OS=Arabidopsis thaliana GN=LNG1 PE=1 SV=1 Back     alignment and function desciption
 Score =  352 bits (902), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 305/867 (35%), Positives = 444/867 (51%), Gaps = 175/867 (20%)

Query: 60  WSPNERKDRFAAKDAPRFSYDGRESRESIKSTIKLKELPRLSLDSKVHSMRGSTTEMKSN 119
           WS   R  +   KD+PRFSYD RE+R   K+  KLKE PRLSLDS+ +S R + +     
Sbjct: 193 WSEGRRVVKL--KDSPRFSYDERETR---KTGAKLKETPRLSLDSRSNSFRSARS----- 242

Query: 120 YLLGDMQRVNGNSSILNQQQEPGSNKRPSSLIAKLMGLEAFPDSTSTNRNQPNQNESLPD 179
                      + S   Q+   G  +  SS++AKLMGLE  PD                 
Sbjct: 243 -----------SCSPEPQELVTGHRRTTSSVVAKLMGLEVIPDEP--------------- 276

Query: 180 VQFDVISGLSKTTLKNKQNQTSGSPRNSIKEPVS-PRIKNANSVKKPTSSSKFPIEPAPW 238
                       T++N++N+   SPR + +  V   R +  +S+KK    +KFP++ +PW
Sbjct: 277 -----------VTIQNRENRFCDSPRPTSRVEVDLQRSRGFDSIKK-MMPAKFPMKASPW 324

Query: 239 KQQEGSKGQTPASLSQETPTRASNSFLSVYGEIEKRLAQLEFKKSGKDLRTLKQILEAMQ 298
            Q +G+K Q       + P   +   L+VYGEI+KRL+QLEFKKS KDLR LKQILEAM+
Sbjct: 325 AQVDGAKNQV------KIPDATT---LTVYGEIQKRLSQLEFKKSEKDLRALKQILEAME 375

Query: 299 KTKEILESREEDQASSFASQ-TGDNNRVDPSSILANSDNLKRGNPTSTKTKRICSPKGFR 357
           KT++++   ++D  +  +S     NN+  PS+I  +S N K                   
Sbjct: 376 KTQQLISKDDDDNKTLCSSNFMQRNNQPIPSAINTSSMNFK------------------S 417

Query: 358 SPIVVMKAAKS-IEKNSNPASSA-----------IQNESLSGYQCRAGRKESVEKRTKDP 405
           S IVVMKAA + + K++  A SA           ++  +L   Q    RK+S      D 
Sbjct: 418 SSIVVMKAATAPVFKDTGIAGSASFSPRNVALPNVKVGNLRQAQKVIPRKQSA----MDV 473

Query: 406 TQRSNYLQDPSSRPIHLTNKDTRAKSLRLGQTSKSSHPTTGKTNSRKCSESLNPRLEHKE 465
           T R  Y +  +      T K+T  + L+    SKS    +GK   +K S SL  R   K+
Sbjct: 474 TPRPGYYKGQTES----TMKNTSTRPLQ----SKSDMAKSGKI--QKPSVSL--RTPPKK 521

Query: 466 LKLENQSHSRTPSSDLSRSRRQHM-----ESGPPQRQSRSKSQHLGQSDDQLSDISVNVR 520
           L  E QS   +P  +L++++RQ +     ES  P+R+   KS+ L QS+D+LSD S ++R
Sbjct: 522 LGFEKQSRPTSPKPELNKNQRQQLSRQQTESASPRRKPGIKSRGLQQSEDRLSDESSDLR 581

Query: 521 YLTHQGDASSLQSGSYISMGSYVGSEVSS---TDRSDKISGAFFLQHGPTVRYPAAGYIG 577
                    SL+S S +S+ S + +EV+S    +R+  I+     QH P  R P    +G
Sbjct: 582 ---------SLRSDSNVSLASNLDTEVTSRYNYERNSDITE----QHTPKQRSPD---LG 625

Query: 578 DKSTAEPGIAGPEQPSPVSVLEATFYRDEPPSPVRKISHAFTDD------EAEWSPVDLN 631
            +S ++P     EQPSPVSVL+  F  D+ PSPVRKIS  F +D      E+ W    +N
Sbjct: 626 MRSLSKPLKVTVEQPSPVSVLDVAFDEDDSPSPVRKISIVFKEDDNLSSEESHW----MN 681

Query: 632 HIAN-CRKARFGSANDYNKLQNMKHLDQNDMHINPTHEKSITDEIAPNFESTDPNHRYIS 690
              N CR   +  +N          L Q D  +    E  + D+    F++ D  H+YIS
Sbjct: 682 KNNNLCRSIVWPESN--------TSLKQPDAELT---EGFMEDDA--EFKNGD--HKYIS 726

Query: 691 EILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKAC-IRLPNDLHKGKKITNAE 749
           EI+LASG LRD +   ++I+L+ +   INP+LFF+LEQ K   + L ++ HKG+     +
Sbjct: 727 EIMLASGLLRDIDYSMISIQLHQAHLPINPSLFFVLEQNKTSNVSLQDNKHKGRGFGQQQ 786

Query: 750 PN--TKKAQRKLVFDAVNEILVHKLVLQESSKK-----WFSPSKLARGRSSGEQLLRDLC 802
                ++++RKL+FD +NEIL H+   +  +K+       S  +     S GE+LL+ LC
Sbjct: 787 TVNLVERSKRKLIFDTINEILAHRFAAEGCTKQPSITLSISTQRTHEKSSRGEELLQTLC 846

Query: 803 SEVDCLQANNSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLI 862
           SE+D LQ +NS C LD DD+ +   IW+DL+    +W     E   LVLD+ERLIFKDLI
Sbjct: 847 SEIDRLQ-DNSKCILDEDDEDL---IWEDLQSHGMNWKEIEGETPGLVLDIERLIFKDLI 902

Query: 863 SEIVRDETGS----LQGHPGRHCRQLF 885
            E+V  E  +    L G P    RQLF
Sbjct: 903 GEVVTSEFAAFPRMLSGQP----RQLF 925




In association with LNG2, regulates leaf morphology by promoting longitudinal polar cell elongation independently of ROT3.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9S823|LNG2_ARATH Protein LONGIFOLIA 2 OS=Arabidopsis thaliana GN=LNG2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query887
224141525 1069 predicted protein [Populus trichocarpa] 0.989 0.821 0.498 0.0
255573414 1047 conserved hypothetical protein [Ricinus 0.981 0.831 0.479 0.0
225451725 1054 PREDICTED: uncharacterized protein LOC10 0.971 0.817 0.476 0.0
225456583 1099 PREDICTED: uncharacterized protein LOC10 0.976 0.787 0.430 1e-173
296082210913 unnamed protein product [Vitis vinifera] 0.806 0.783 0.445 1e-165
255547165 1094 conserved hypothetical protein [Ricinus 0.975 0.790 0.415 1e-155
224130024 1027 predicted protein [Populus trichocarpa] 0.958 0.827 0.413 1e-155
356507062 1247 PREDICTED: uncharacterized protein LOC10 0.983 0.699 0.395 1e-146
224118938 1038 predicted protein [Populus trichocarpa] 0.943 0.806 0.406 1e-143
356519134 1092 PREDICTED: uncharacterized protein LOC10 0.977 0.793 0.393 1e-143
>gi|224141525|ref|XP_002324120.1| predicted protein [Populus trichocarpa] gi|222867122|gb|EEF04253.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/916 (49%), Positives = 579/916 (63%), Gaps = 38/916 (4%)

Query: 3    REAREISIRNATKANAGGQTLKYMDSPRPLQQPKSFKSRDSSQIESFRVLAKLREAPWSP 62
            RE R +S++ AT   A GQTLKY+DSPRPL    S   +D    ESFRVL KLRE+P+  
Sbjct: 161  REPRGLSVKTATTGEARGQTLKYIDSPRPLHYLNSVNPKDPGPRESFRVLHKLRESPYKS 220

Query: 63   NERKDRF---AAKDAPRFSYDGRESRESIKSTIKLKELPRLSLDSKVHSMRGSTTEMKSN 119
            +E K  F     KDA RFSYDG ESR+++KSTIKLKELPRLSLDS+  S+RGS  EMKSN
Sbjct: 221  SEGKSNFLTGGLKDARRFSYDGWESRDTLKSTIKLKELPRLSLDSRAGSVRGSNPEMKSN 280

Query: 120  YLLGDMQRVNGNS-SILNQQQEPGSNKRPSSLIAKLMGLEAFPDSTSTNRNQPNQNESLP 178
            +L  D+ R + NS S LN QQ+PGSNKRPSS++AKLMGLEA PD  ST+ NQ  Q ++  
Sbjct: 281  FLSRDLGRDDLNSNSFLNNQQDPGSNKRPSSVVAKLMGLEALPDPMSTSGNQTTQIKTHL 340

Query: 179  DVQFDVISGLSKTTLKNKQNQTSGSPRNSIKEPVSPRIKNANSVKKPTSSSKFPIEPAPW 238
            D +   + G S+TT  +KQN+ SGSPRN  KEP SP  +NA S KK T+S KFPIEPAPW
Sbjct: 341  DEENKFL-GSSRTTDLDKQNRISGSPRNLHKEPTSPSQRNAASDKKLTASLKFPIEPAPW 399

Query: 239  KQQEGSKG-QTPASLSQETPTRASNSFLSVYGEIEKRLAQLEFKKSGKDLRTLKQILEAM 297
            +Q +GS+G Q PA  ++ T T+  +S LSVYGEIEKRLAQLEF+KSGKDLR LKQILEAM
Sbjct: 400  RQPDGSRGSQAPAQKNRVTLTKVPSSSLSVYGEIEKRLAQLEFQKSGKDLRALKQILEAM 459

Query: 298  QKTKEILESREEDQASSFASQTGDNNRVDPSSILANSDNLKRGNPTSTKTKRICSPKGFR 357
            QKTKEILE+R+ED  SSF ++    + +D  S LAN  +L+  +P S  TK   SPK F+
Sbjct: 460  QKTKEILETRKED--SSFETRRSIISSLDQGSKLANLRDLQSNSPISVSTKGTTSPKSFK 517

Query: 358  SPIVVMKAAKSIEKNSNPASSAIQNESLSG-YQCRA-----GRKESVEKRT-KDPTQRSN 410
            S IV+MK AK I K  N  S+    +S SG ++ R      GRKESV+K+  KD + R  
Sbjct: 518  SSIVIMKPAKLIGKTINSVSAINATDSSSGIHRLRVATPEDGRKESVDKQAAKDVSPRIK 577

Query: 411  YLQDPSSRPIHL--TNKDTRAKSLRLGQTSKSSHPTTGK-TNSRKCSESLNPRLEHKELK 467
             L D S++P+H    +K+  ++S+RL Q SK    TT + TNS K SE++N R + K+L 
Sbjct: 578  NLTDHSNKPLHRNPMDKNAGSRSIRLAQPSKEIRSTTREATNSGKRSETMNLRQQQKKLG 637

Query: 468  LENQSHSRTPSSDLSRSRRQH----MESGPPQRQSRSKSQHLGQSDDQLSDISVNVRYLT 523
             E QS   T S + +R RRQ      +S  P ++ R+KS  L  SD +LSDIS ++R  +
Sbjct: 638  FEKQSRPATASLESNRRRRQPSKQPTDSCSPHQKPRAKSLDLQPSDYELSDIS-DLRDSS 696

Query: 524  HQGDASSLQSGSYISMGSYVGSEVSSTDRSDKISGAFFLQHGPTVRYP------AAGYIG 577
            H  DA SLQS S I + S    EVSS DRS+KI+  F  Q     R            I 
Sbjct: 697  HHSDAVSLQSESNIGLASQYDDEVSSNDRSNKINKTFIQQAHLRQRLRCLIQNLVERSIK 756

Query: 578  DKSTAEPGIAGPEQPSPVSVLEATFYRDEPPSPVRKISHAFTDDEA------EWSPVDLN 631
              S  EP  A  EQPSPVSVL+A FY DE PSP++KIS AF DDEA      EW P+D +
Sbjct: 757  GTSIPEPRPASSEQPSPVSVLDAAFYGDELPSPIKKISIAFKDDEALKSDGVEWIPIDED 816

Query: 632  HIANCRKARFGSANDYNKLQNMKHLDQNDMHINPTHEKSITDEIAPNFESTDPNHRYISE 691
            +  N   +   S  +   +QN+K L QN   +  TH++ ITDE  P +   +P+H YIS+
Sbjct: 817  YSFNSMNSGLHSMINQKNVQNLKPLIQNLKEMLSTHKEYITDETTPFYNHANPDHEYISQ 876

Query: 692  ILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDLHKGKKITNAEPN 751
            I LASG  +DFE+    I L+P+G  INP++F  LEQ KA     ND H GK+I+ +E +
Sbjct: 877  IYLASGLHKDFESGLRTINLHPTGTPINPDIFHALEQAKASSGHFNDDHNGKRISLSETH 936

Query: 752  TKKAQRKLVFDAVNEILVHKLVLQESSKKWFSPSKLARGRSSGEQLLRDLCSEVDCLQAN 811
              K QRKL+FD VNEILVHKL+ + SSK+  S   LA      +QLL DLCSE+D LQ  
Sbjct: 937  A-KIQRKLLFDVVNEILVHKLLSENSSKQRLSSKMLAGKGQKRQQLLGDLCSEIDRLQC- 994

Query: 812  NSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISEIVRDETG 871
              +  LD +DD+  SI W+DL   S  WT C  EI  +VL VERLIFKDLI+E++  E  
Sbjct: 995  -LHYLLDDEDDNSRSIQWEDLMRESIHWTACHDEIQGIVLAVERLIFKDLITEVINSEMI 1053

Query: 872  SLQGHPGRHCRQLFSK 887
              QG    H RQLF K
Sbjct: 1054 GRQGRLAGHHRQLFPK 1069




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573414|ref|XP_002527633.1| conserved hypothetical protein [Ricinus communis] gi|223533007|gb|EEF34772.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|225451725|ref|XP_002276947.1| PREDICTED: uncharacterized protein LOC100266999 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225456583|ref|XP_002265665.1| PREDICTED: uncharacterized protein LOC100253543 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296082210|emb|CBI21215.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255547165|ref|XP_002514640.1| conserved hypothetical protein [Ricinus communis] gi|223546244|gb|EEF47746.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224130024|ref|XP_002328635.1| predicted protein [Populus trichocarpa] gi|222838811|gb|EEE77162.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356507062|ref|XP_003522290.1| PREDICTED: uncharacterized protein LOC100787391 [Glycine max] Back     alignment and taxonomy information
>gi|224118938|ref|XP_002317944.1| predicted protein [Populus trichocarpa] gi|222858617|gb|EEE96164.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356519134|ref|XP_003528229.1| PREDICTED: uncharacterized protein LOC100805643 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query887
TAIR|locus:20373181025 TRM4 "AT1G74160" [Arabidopsis 0.947 0.819 0.373 2.3e-117
TAIR|locus:2076557905 LNG2 "LONGIFOLIA2" [Arabidopsi 0.363 0.355 0.405 1.6e-73
TAIR|locus:2180857927 LNG1 "LONGIFOLIA1" [Arabidopsi 0.466 0.446 0.355 2.5e-57
TAIR|locus:20274731014 TRM3 "AT1G18620" [Arabidopsis 0.677 0.592 0.275 4.5e-41
TAIR|locus:2087413540 TRM5 "AT3G63430" [Arabidopsis 0.111 0.183 0.303 1.1e-13
FB|FBgn0036203 1514 Muc68D "Mucin 68D" [Drosophila 0.666 0.390 0.212 7.9e-08
ZFIN|ZDB-GENE-091204-67 3919 si:dkey-33i22.3 "si:dkey-33i22 0.588 0.133 0.221 6.1e-07
CGD|CAL0003874 1404 PGA55 [Candida albicans (taxid 0.622 0.393 0.191 1.8e-06
UNIPROTKB|Q59SG9 1404 PGA55 "Flocculin-like protein" 0.622 0.393 0.191 1.8e-06
TAIR|locus:2174103703 TRM25 "AT5G62170" [Arabidopsis 0.246 0.311 0.218 2.7e-06
TAIR|locus:2037318 TRM4 "AT1G74160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
 Identities = 342/916 (37%), Positives = 494/916 (53%)

Query:     1 MYREAREISIRNA-TKANAGGQTLKYMDSPRPLQQPKSFKSRDSSQIESFRVLAKLREAP 59
             MYREAR +  +   T+     Q+ +  DSPRP    +S    D +  ESFRVLA+LRE  
Sbjct:   154 MYREARGLLSKTPMTREEVVRQSRRE-DSPRPYGLKQS-TPMDLN--ESFRVLARLRETS 209

Query:    60 WSPNERKDRFAAKDAPRFSYDGRESRESIKSTIKLKELPRLSLDSKVHSMRGSTTEMKSN 119
                NE       KDAPR+S D   S +++KS  KLKELPRLSLDS+  + R S+ + KS+
Sbjct:   210 QHYNE----LGMKDAPRYSVD---SHDTLKSRQKLKELPRLSLDSRERATRNSSVDPKSS 262

Query:   120 YLLGDMQRVNGNSSILNQQQEPGSNKRPSSLIAKLMGLEAFPDST-STNRNQPNQNES-L 177
              L          S   ++     S KRP S++AKLMGLE  P S    + +Q   N++ +
Sbjct:   263 KL----------SESFSESCSSSSKKRPPSVVAKLMGLETLPGSPLGRDIHQFGLNKTNI 312

Query:   178 PDVQFDVIS-GLSKTTLKNKQNQTSGSPRNSIKEPVSPRIKNANSVKKPTSSSKFPIEPA 236
              D   D  S  L +  L      +  SPR+  K+P SPR +N++ V KP S+++FP+EPA
Sbjct:   313 SDQNDDPFSRSLREKNLNRAIRFSPSSPRSLGKDPASPRWRNSDFVMKPLSNTRFPVEPA 372

Query:   237 PWKQQEGSKG-QTPASLSQET-PTRASNSFLSVYGEIEKRLAQLEFKKSGKDLRTLKQIL 294
             PWK  + ++  Q  AS+  +  P  A N   +VY E+E+RL  LEFK SGKDLR LKQIL
Sbjct:   373 PWKHADRNRVLQKQASMPVKAKPYEAPNFPPTVYSEMERRLNDLEFKHSGKDLRALKQIL 432

Query:   295 EAMQKTKEILESREEDQASSFASQTGDNNRVDPSSILANSDNLKRGNPTSTKTKRICSPK 354
             E+MQ +K  L++ ++ Q+++FA Q  D  R        NS        + T+ +   S +
Sbjct:   433 ESMQ-SKGFLDTEKQQQSTNFAVQR-DYER-------ENSATSNHAMSSRTRVQSSSSNQ 483

Query:   355 GFRSPIVVMKAAKSIEKNSNPASSAIQNESLSGYQCRAGRKESVEKRTK-DPTQRSNYLQ 413
              ++SPIV+MK AK +EK   PASS I   SL+G + +  R++  +K T    ++R     
Sbjct:   484 VYQSPIVIMKPAKLVEKAGIPASSLIPIHSLTGIK-KIRREKPDDKGTSASNSKRVTKDC 542

Query:   414 DPSSRPIHLTNKDTRAKSLRLGQTSKSSHPT-TGKTNSRKCSESLNPRLEHKELKLENQS 472
              P +R           KS      S S  P    K ++ K S S++PRL+ K+L+ + +S
Sbjct:   543 SPGNRRAESCTSSFDKKSDSRNVRSSSKKPQQVSKESASKSSGSVSPRLQQKKLEYDKRS 602

Query:   473 HSRTPSSDLSRSRR----QHMESGPPQRQSRSKSQH-LGQSDDQLSDISVNVRYLTHQ-G 526
                TP  D S+SR+    Q +ES  P  + R K Q  L Q DDQLS  S   R  +H   
Sbjct:   603 RPPTPP-DSSKSRKPSNQQLVESTSPGGRRRPKGQKSLQQVDDQLSQASNESRTSSHGIC 661

Query:   527 DASSLQSGSYISMGSYV-GSEVSSTDRSDKISGAFFLQHGPTVRYPAAGYIGDKSTAEPG 585
               S  ++ + +   +   G +  S   + K   +  +Q+  + R+   G      +A   
Sbjct:   662 TQSETEASACVEKSTEADGGKSPSVIEAAKAVVSNLMQNKSSPRFSEDGL-----SANLS 716

Query:   586 IAGPEQPSPVSVLEATFYRDEPPSPVR---KISHAFTDDEAE--WSPVDLNHIANCRKAR 640
             +   E PSP+SVL+A+ YR+  PSPV+    ++H F D+  E  W+P    +  +   + 
Sbjct:   717 LVALEHPSPISVLDASTYRETEPSPVKTQGNVAHDFGDENCEDQWNPA---YSFSETTSS 773

Query:   641 FGSANDYNKLQNMKHLDQNDMHINPTHEKSITDEIAPNFESTDP--NHRYISEILLASGF 698
             F    +  KLQN++HL Q    +N +H+++  D IA   E+ DP  +HRYISEILLASG 
Sbjct:   774 FSPEINRKKLQNVEHLVQKLRRLNSSHDEASQDYIASLCENADPTTDHRYISEILLASGL 833

Query:   699 L-RDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDLHKGK-KITNAEPNTKKAQ 756
             L RD  +     +L+PSGH INP LFF+LEQTK      + LHK + K+   E    K  
Sbjct:   834 LLRDLGSGLTTFQLHPSGHPINPELFFVLEQTKGS-STTHLLHKEESKVLKNE----KLN 888

Query:   757 RKLVFDAVNEILVHKLVLQESSKKWFSPS--KLARGRSSGEQLLRDLCSEVDCLQAN--- 811
             RKLVFD VNEILV KL   E++      S  K+ +   S +QLL++LCS ++  Q     
Sbjct:   889 RKLVFDLVNEILVEKLASVEATTNPLMKSYAKVTKKAVSAQQLLKELCSAIETQQKQATK 948

Query:   812 -NSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISEIVRDET 870
              + N  L+ +DD + SI+ +D+   S +W + S E++ LVLDVERL+FKDL++EIV  ET
Sbjct:   949 RSENFLLEEEDDFLKSILAEDVTIRSGNWADFSGEMSGLVLDVERLVFKDLVNEIVHAET 1008

Query:   871 GSLQGHPGRHCRQLFS 886
               LQ   GR  R LF+
Sbjct:  1009 SRLQAKSGRR-RTLFA 1023




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0009506 "plasmodesma" evidence=IDA
GO:0010075 "regulation of meristem growth" evidence=RCA
TAIR|locus:2076557 LNG2 "LONGIFOLIA2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180857 LNG1 "LONGIFOLIA1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027473 TRM3 "AT1G18620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087413 TRM5 "AT3G63430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0036203 Muc68D "Mucin 68D" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-091204-67 si:dkey-33i22.3 "si:dkey-33i22.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
CGD|CAL0003874 PGA55 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59SG9 PGA55 "Flocculin-like protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
TAIR|locus:2174103 TRM25 "AT5G62170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query887
pfam14309160 pfam14309, DUF4378, Domain of unknown function (DU 1e-38
>gnl|CDD|222668 pfam14309, DUF4378, Domain of unknown function (DUF4378) Back     alignment and domain information
 Score =  140 bits (356), Expect = 1e-38
 Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 23/180 (12%)

Query: 686 HRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDLHKGKKI 745
             YI +IL ASG LRD E+       + S   ++P+LF  LE   +              
Sbjct: 3   FSYIRDILSASGLLRDEESSLSR--WHSSDCPLDPSLFDELENKYSE------------- 47

Query: 746 TNAEPNTKKAQRKLVFDAVNEILVHKLVLQESSKKWFSPSKLA-RGRSSGEQLLRDLCSE 804
            +++    ++ RKL+FD VNEILV  L    S K W     L  R + SGEQLL ++  E
Sbjct: 48  -SSKDTESRSDRKLLFDCVNEILVEILEPYLSMKPWLKSVTLRIRPKPSGEQLLEEVWKE 106

Query: 805 VDCLQANNSNCNLDGDDDSMTSIIWKDLKHGSTDWTNCSSEITWLVLDVERLIFKDLISE 864
           +  L   +S C ++ + D   S++ KDL  G   W +   E+  + L++ER+I  DL+ E
Sbjct: 107 ISRLL--SSACEVEDELD---SLVDKDLSSGGG-WLDFREEVEEIGLEIERMILDDLVDE 160


Length = 160

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 887
PF14309162 DUF4378: Domain of unknown function (DUF4378) 100.0
PF1438334 VARLMGL: DUF761-associated sequence motif 97.78
>PF14309 DUF4378: Domain of unknown function (DUF4378) Back     alignment and domain information
Probab=100.00  E-value=2.5e-33  Score=275.79  Aligned_cols=161  Identities=32%  Similarity=0.507  Sum_probs=135.7

Q ss_pred             chhHHHHHHHHHcCCCccccccccccccCCCCCCCCchHHHHHhccccccCCCCccccCcccccCCCCCCccchhhhhHH
Q 002735          684 PNHRYISEILLASGFLRDFEADFMNIKLNPSGHLINPNLFFILEQTKACIRLPNDLHKGKKITNAEPNTKKAQRKLVFDA  763 (887)
Q Consensus       684 ~d~~YIrEIL~ASGLl~d~~s~~~~~~whSs~~PIdPsLFe~LEq~~~~~~s~~~~~~gk~~~~~~~~~~rsdRKLLFD~  763 (887)
                      +||.||++||.+|||+.+..  ..+..||++++||+|+||++||+.+..       ...+     ...+.+++|||||||
T Consensus         1 ~e~~Yv~~iL~~sgl~~~~~--~~~~~~~s~~~pl~p~lf~~LE~~~~~-------~~~~-----~~~~~~~~rkLLFD~   66 (162)
T PF14309_consen    1 EEFSYVRDILEASGLLRDEP--SSLSRWHSSDCPLDPSLFEELEQKYSE-------KSEK-----KSRWSRSDRKLLFDC   66 (162)
T ss_pred             ChHHHHHHHHHHcCCCCCcc--ccccccCCCCCCcChHHHHHHHccccc-------cccc-----cccccchhhhhHHHH
Confidence            48999999999999985443  346699999999999999999998761       0011     123789999999999


Q ss_pred             HHHHHHHhhhhccCCCCCCCCccc-ccCCCchhhHHHHHHHHHHhhhccCCCCCCCCCchhHhHHHHHhhhcCCCCCCcc
Q 002735          764 VNEILVHKLVLQESSKKWFSPSKL-ARGRSSGEQLLRDLCSEVDCLQANNSNCNLDGDDDSMTSIIWKDLKHGSTDWTNC  842 (887)
Q Consensus       764 VNEiL~eil~~~~~~~PWlss~~~-~r~~~sGq~LLeEVwseI~~l~~~~s~csleded~sLD~LV~kDm~~~~g~W~df  842 (887)
                      |||||.++++++..++||+++... .++.+.|+.|++|||++|..|+..  .|.   ..++++.||.+||.+ .++|++|
T Consensus        67 vNE~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~eV~~~v~~~~~~--~~~---~~~~~d~lv~~Dl~~-~~~w~~~  140 (162)
T PF14309_consen   67 VNEILSEILRPYLGCHPWLKSFSPRIRPKPSGEELLEEVWKEVSRWRSM--RCE---VEDELDSLVEKDLSR-EDGWWDF  140 (162)
T ss_pred             HHHHHHHHHhhcCCCCccccccccccccCCcHHHHHHHHHHHHHHHHhc--ccc---ccchHHHHHHHHHhC-CCCcCcH
Confidence            999999999999999999987653 567889999999999999999983  332   335689999999997 5667799


Q ss_pred             chhHHHHHHHHHHHHHHHHHHH
Q 002735          843 SSEITWLVLDVERLIFKDLISE  864 (887)
Q Consensus       843 ~~EveeIGlEIErlIfdDLVdE  864 (887)
                      +.|+++||.|||++||++||+|
T Consensus       141 ~~E~~~i~~eIE~~Il~~Lv~E  162 (162)
T PF14309_consen  141 REEVEEIGLEIERMILDDLVEE  162 (162)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999987



>PF14383 VARLMGL: DUF761-associated sequence motif Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query887
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.5 bits (117), Expect = 5e-06
 Identities = 49/302 (16%), Positives = 87/302 (28%), Gaps = 102/302 (33%)

Query: 596 SVLEATFYRDEPPSPVRKISHAFTDDEAEWSPVDLNHIANCRKARFGSANDYNKLQNMKH 655
           + +              K+     D +  W    LN + NC             LQ + +
Sbjct: 164 TWVALDVCLSY------KVQCKM-DFKIFW----LN-LKNCNSPE----TVLEMLQKLLY 207

Query: 656 LDQNDMHINPTHEKSITDEIAPNFES-TDPNHRYISEILLASGFLRDFEADFMNIKLNPS 714
                             +I PN+ S +D +      I      LR      +  K   +
Sbjct: 208 ------------------QIDPNWTSRSDHSSNIKLRIHSIQAELRRL----LKSKPYEN 245

Query: 715 GHLI-----NPNLF--FILEQTKACIRLPNDLHKGKKITNAEPNTKKAQRKLVFDAVNEI 767
             L+     N   +  F L     C  L         +T     T+  Q   V D ++  
Sbjct: 246 CLLVLLNVQNAKAWNAFNLS----CKIL---------LT-----TRFKQ---VTDFLSAA 284

Query: 768 LVHKLVLQESSKKWFSPSKLARGRSSGEQLLRDLCSEVDCL--QANNSNCNLDGDDDSMT 825
               + L   S    +P +          LL+ L      L  +   +N           
Sbjct: 285 TTTHISLDHHSMT-LTPDE------VKSLLLKYLDCRPQDLPREVLTTNPRR-------L 330

Query: 826 SIIWKDLKHGSTDWTNCSSEITWLVLDVERL--IFKDLISEIVRDETGSLQGHPGRHCRQ 883
           SII + ++ G   W N      W  ++ ++L  I +  ++ +   E            R+
Sbjct: 331 SIIAESIRDGLATWDN------WKHVNCDKLTTIIESSLNVLEPAEY-----------RK 373

Query: 884 LF 885
           +F
Sbjct: 374 MF 375


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00