Citrus Sinensis ID: 002751

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-----
Protein Sequence
MHAMQGYKSGRSAADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSEFEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGSKINHGSGSSMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQAGIKPKEELGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVADQ
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccEEEEEEccccccccccccccEEEEEccccccHHHcccccccccccccccccccEEEEEcccccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEccccccccccHHHccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEccccccccccccccEEEEEcccEccHEEEcccEEEEEccccccccEEEEEEEcccEEcccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHcccccccHccHHHHHHHccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHcHHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccccccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHEEEccc
Coil and Loop (DISEMBL)
mhamqgyksgrsaadpgsqiessqtsSARSLAQanssapaaqtshasipnkidwngqavssefedvdsghgsgtpsVAQSIYGSMSQNASLVAASIaglpelsrhpqwfagskinhgsgssmwpqidnssrnatSVLDqhghqnfyvgqpsgadfithkltdarlasdstianigtcgerlITDIdvhavttssqgASQVLLEHNFNLinnqcqncpvpevtvasvsqagikpkeelgelkkldsfgrwmdqeiggdcddslmasdsgnywntldaenddkevsSLSHHMQLemdslgpslsqeqlfsirdfspdwaysgaETKVLIIGMFLgtkklssdtkwgcmfgeievpaevltdnvircqapshaagrvpfyitgsnrlacsevrefeyrekpskagypvaskiapeDEVRLQTRLAKFLyldperkwfdctiedcnkcklkNTIYSmrgdsekdwgrvdespmaiegdcpnsRDKLIQNLLRNRLCEWLVWkiheggkgpnviddggQGVVHLAAALGyewamrpiiatgvspnfrdargrTALHWASYFGREETVIMLVKLgaapgavedptpafpggqtaadlassrghkgIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAqigvqsdgpaaeQLSLRGSLAAVRKSAHAAALIQQAFRVRsfrhrqsiqssddvsEVSVDLVALGslnkvskmihfEDYLHFAAIKIQQkyrgwkgrkDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRrgsglrgfrvgnstanvasenektdeyeFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFEnfkmcddgsgllsqgedslngptkdnlHAYVADQ
Flexible Loop (DISEMBL)
mhamqgyksgrsaadpgsqIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSEFEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGSKINHGSGSSMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSqagikpkeelgelkkldSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPshaagrvpfyitGSNRLACSEVREFEyrekpskagypvaskiapedeVRLQTRLAKFlyldperkwfdctiedcnkcklkntiysmrgdsekdwGRVDESpmaiegdcpnsrDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHrqsiqssddvsevSVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLqahvrghqvrkqykkvvwsvSIVEkailrwrrrgsglrgfrvgnstanvasenektdeyeflrigrkqkfaGVEKALErvksmvrnpeardQYMRMVAKFENFKMCDDGSGLLsqgedslngptkdnlhayvadq
Low Complexity Region (SEG)
MHAMQGYKSGRSAADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSEFEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGSKINHGSGSSMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQAGIKPkeelgelkklDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVaaalaaekanetaaQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQssddvsevsvdlvALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILrwrrrgsglrgfrvgNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVADQ
Disordered region (IsUnstruct)
*******************************************************************************************VAASIAGL*******QWFA******************************GHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQA***********KKLDSFGRWMDQEIGGDC***********YW**********************************LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEY**********V***IAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMR************************RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP***************************IAGYLA*************************************************************AHAAALIQQAFRVRSFR************EVSVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGLRGFRVGN**************YEFLRIGRKQKFAGVEK*****************YMRMVAKFENFKMC*****************************
Disordered Region (DISOPRED)
*****************************************************************************************************************************************************************************************************************************************************FGRWMD*******************************************************FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKA*****SKIAPEDEVRLQTRLAKFLYLD*************************RGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL*******NGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGS************YLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWR********************************IGRKQKFAGVEKALERVKSMVRN*EARDQYMRMVAKFEN************************NLHAYVA**
Disordered Region (DISEMBL)
*********************************************ASIPNKIDWNGQAVS**************PSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGSKINHGSGSSMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQAGIKPKEELGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSF***************SVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVADQ
Disordered Region (DISPRO)
******************************************************************DSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGSKINHGSGSSMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVAS*SQAGIKPKEELGELKKLDSFGRWMDQEIGG*CD**L**SDS***WNTLDAE***********************LSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLT***********************************QLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGL******************TDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDD****************KDNLHAYVADQ
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHAMQGYKSGRSAADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSEFEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGSKINHGSGSSMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQAGIKPKEELGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVADQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	885	2.2.26 [Sep-21-2011]
Q8GSA7	1032	Calmodulin-binding transc	yes	no	0.735	0.630	0.403	1e-140
Q6NPP4	1050	Calmodulin-binding transc	no	no	0.662	0.558	0.431	1e-139
Q9FY74	1007	Calmodulin-binding transc	no	no	0.662	0.581	0.426	1e-135
Q9FYG2	1016	Calmodulin-binding transc	no	no	0.592	0.515	0.402	4e-98
O23463	923	Calmodulin-binding transc	no	no	0.666	0.639	0.323	8e-78
Q9LSP8	838	Calmodulin-binding transc	no	no	0.631	0.667	0.324	2e-74
O94983	1202	Calmodulin-binding transc	yes	no	0.290	0.213	0.255	9e-11
Q9Y6Y1	1673	Calmodulin-binding transc	no	no	0.310	0.164	0.25	1e-10
A2A891	1682	Calmodulin-binding transc	yes	no	0.310	0.163	0.253	2e-10
Q80Y50	1208	Calmodulin-binding transc	no	no	0.305	0.223	0.251	3e-09

>sp|Q8GSA7|CMTA3_ARATH Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1

 Score =  501 bits (1290), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 285/707 (40%), Positives = 413/707 (58%), Gaps = 56/707 (7%)

Query: 158 HKLTDARLASDSTIANIGTCGERLIT--DIDVHAVTTSSQGASQVLLEHNFNLINNQCQN 215
           H++ D  L S  T+ +  +  E ++   + ++++  TS +       +   N I+N   N
Sbjct: 312 HEVLDQILESSFTMQDFASLQESMVKSQNQELNSGLTSDRTVWFQGQDMELNAISNLASN 371

Query: 216 CPVPEVTVASVSQAGIKPKEELGE--LKKLDSFGRWMDQEIG-----GDCDDSLMASDSG 268
              P   ++++ Q  +     LGE  LKK+DSF RWM +E+G      D ++S   S S 
Sbjct: 372 EKAP--YLSTMKQHLLHGA--LGEEGLKKMDSFNRWMSKELGDVGVIADANESFTQSSSR 427

Query: 269 NYWNTLDAENDDKEVSSLSHHMQLEMDS--LGPSLSQEQLFSIRDFSPDWAYSGAETKVL 326
            YW  +++E+      S  H+ + +MD   + PSLS+EQLFSI DFSP WAY G E  V 
Sbjct: 428 TYWEEVESED-----GSNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPSWAYVGCEVVVF 482

Query: 327 IIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLAC 386
           + G FL T++ +   +W CMFG+ EVPA+V+++ +++C AP H AGRVPFY+T SNRLAC
Sbjct: 483 VTGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCSNRLAC 542

Query: 387 SEVREFEYREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLDPERKWFDCTIE----DCN 442
           SEVREFEY+   S+    V  + A +DE  +    A+F+ L   +      +     D +
Sbjct: 543 SEVREFEYKVAESQ----VFDREA-DDESTIDILEARFVKLLCSKSENTSPVSGNDSDLS 597

Query: 443 KCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEG 502
           +   K ++     D + D   ++E          N ++ L+Q  L+  L  WL+ KI EG
Sbjct: 598 QLSEKISLLLFENDDQLDQMLMNEISQE------NMKNNLLQEFLKESLHSWLLQKIAEG 651

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           GKGP+V+D+GGQGV+H AA+LGY WA+ P I  GVS +FRD  G TALHWA++FGRE  +
Sbjct: 652 GKGPSVLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRERII 711

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENG 622
             L+ LGAAPG + DP P FP G T +DLA + GHKGIAGYL+E  L +H+S L++N+  
Sbjct: 712 GSLIALGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLNDKN 771

Query: 623 MDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSF 682
            + V  A +   ++ T +                     AVR +  AAA I Q FR +SF
Sbjct: 772 AETVEMAPSPSSSSLTDSL-------------------TAVRNATQAAARIHQVFRAQSF 812

Query: 683 RHRQSIQSSDDVSEVSVD--LVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDF 740
           + +Q  +  D    +S +  L  L      S   H +D +  AAI+IQ K+RG+KGRKD+
Sbjct: 813 QKKQLKEFGDKKLGMSEERALSMLAPKTHKSGRAHSDDSVQAAAIRIQNKFRGYKGRKDY 872

Query: 741 LKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGLRGFRVGNSTANVA 800
           L  R  I+K+QAHVRG+Q RK Y+K++WSV ++EK ILRWRR+G+GLRGF+       + 
Sbjct: 873 LITRQRIIKIQAHVRGYQFRKNYRKIIWSVGVLEKVILRWRRKGAGLRGFKSEALVEKMQ 932

Query: 801 SENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMV 847
              EK ++ +F + GRKQ    ++KAL RVKSMV+ PEARDQY R++
Sbjct: 933 DGTEKEEDDDFFKQGRKQTEDRLQKALARVKSMVQYPEARDQYRRLL 979

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1

 Score =  496 bits (1276), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/631 (43%), Positives = 387/631 (61%), Gaps = 45/631 (7%)

Query: 240  LKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGP 299
            LKK+DSF RW+ +E+G   D  + +S  G  W +++ EN                 SL P
Sbjct: 405  LKKVDSFSRWVSKELGEMEDLQMQSSSGGIAWTSVECEN------------AAAGSSLSP 452

Query: 300  SLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTD 359
            SLS++Q F++ DF P W  + +E +V++IG FL + +  +   W CMFGE+EVPA++L D
Sbjct: 453  SLSEDQRFTMIDFWPKWTQTDSEVEVMVIGTFLLSPQEVTSYSWSCMFGEVEVPADILVD 512

Query: 360  NVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQT 419
             V+ C AP H  GRVPFYIT S+R +CSEVREF++    ++         A   E  L  
Sbjct: 513  GVLCCHAPPHEVGRVPFYITCSDRFSCSEVREFDFLPGSTRKLNATDIYGANTIETSLHL 572

Query: 420  RLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRV----DES----PMAI 471
            R    L L        C++++       + I+   G+  +   ++    DE     P  I
Sbjct: 573  RFENLLALR-------CSVQE-------HHIFENVGEKRRKISKIMLLKDEKEPPLPGTI 618

Query: 472  EGDCPN--SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAM 529
            E D     ++++LI+    ++L  WL+ K+ E GKGPN++D+ GQGV+HLAAALGY+WA+
Sbjct: 619  EKDLTELEAKERLIREEFEDKLYLWLIHKVTEEGKGPNILDEDGQGVLHLAAALGYDWAI 678

Query: 530  RPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAA 589
            +PI+A GVS NFRDA G +ALHWA++ GRE+TV +LV LGA  GA+ DP+P  P G+TAA
Sbjct: 679  KPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAGALADPSPEHPLGKTAA 738

Query: 590  DLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV--QSD 647
            DLA   GH+GI+G+LAE+ L+S+L  LTV  +  +N +A  +  KA  T A+      S 
Sbjct: 739  DLAYGNGHRGISGFLAESSLTSYLEKLTV--DAKENSSADSSGAKAVLTVAERTATPMSY 796

Query: 648  GPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQ-SIQSSDDVSEVSVDLVALGS 706
            G   E LS++ SL AV  +  AA  + Q FR++SF+ +Q S    D+  ++S +L    +
Sbjct: 797  GDVPETLSMKDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGGDNKFDISDELAVSFA 856

Query: 707  LNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV 766
              K  K  H    +H AA++IQ+KYRGWK RK+FL IR  IVK+QAHVRGHQVRKQY+ +
Sbjct: 857  AAKTKKSGHSSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRAI 916

Query: 767  VWSVSIVEKAILRWRRRGSGLRGFR---VGNSTANVASENEKTDEYEFLRIGRKQKFAGV 823
            +WSV ++EK ILRWRR+GSGLRGF+   +   T  V    ++ D+Y+FL+ GRKQ    +
Sbjct: 917  IWSVGLLEKIILRWRRKGSGLRGFKRDTISKPTEPVCPAPQE-DDYDFLKEGRKQTEERL 975

Query: 824  EKALERVKSMVRNPEARDQYMRMVAKFENFK 854
            +KAL RVKSM + PEAR QY R++   E F+
Sbjct: 976  QKALTRVKSMAQYPEARAQYRRLLTVVEGFR 1006

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FY74|CMTA1_ARATH Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=2

 Score =  484 bits (1245), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 272/638 (42%), Positives = 374/638 (58%), Gaps = 52/638 (8%)

Query: 240 LKKLDSFGRWMDQEIGGDCDDSLMASDSGNY-WNTLDAENDDKEVSSLSHHMQLEMDSLG 298
           LKK+DSF +W  +E+G + +D  M S  G+  W T++ E     +S            L 
Sbjct: 356 LKKVDSFSKWAIKELG-EMEDLQMQSSRGDIAWTTVECETAAAGIS------------LS 402

Query: 299 PSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLT 358
           PSLS++Q F+I DF P  A + AE +V++IG FL + +  +   W CMFGE+EVPAE+L 
Sbjct: 403 PSLSEDQRFTIVDFWPKSAKTDAEVEVMVIGTFLLSPQEVTKYNWSCMFGEVEVPAEILV 462

Query: 359 DNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQ 418
           D V+ C AP H AG VPFY+T SNR ACSEVREF++    ++            +E  LQ
Sbjct: 463 DGVLCCHAPPHTAGHVPFYVTCSNRFACSEVREFDFLSGSTQKINATDVYGTYTNEASLQ 522

Query: 419 TRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRV----DESPMAIEGD 474
            R  K L     R +             ++ I+   GD  +   ++    +E    + G 
Sbjct: 523 LRFEKML---AHRDFVH-----------EHHIFEDVGDKRRQISKIMLLKEEKEYLLPGT 568

Query: 475 CPNSRDK------LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWA 528
                 K      L + L    L  WL+ K+ E GKGPN++D+ GQG++H  AALGY+WA
Sbjct: 569 YQRDSTKQEPKGQLFRELFEEELYIWLIHKVTEEGKGPNILDEDGQGILHFVAALGYDWA 628

Query: 529 MRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTA 588
           ++P++A GV+ NFRDA G +ALHWA++ GREETV +LV LGA  GA+ DP+P  P G+TA
Sbjct: 629 IKPVLAAGVNINFRDANGWSALHWAAFSGREETVAVLVSLGADAGALTDPSPELPLGKTA 688

Query: 589 ADLASSRGHKGIAGYLAEADLSSHLSSLTVN--ENGMDNVAAALAAEKANETAAQIGVQS 646
           ADLA + GH+GI+G+LAE+ L+S+L  LTV+  EN   N     A +  +E  A      
Sbjct: 689 ADLAYANGHRGISGFLAESSLTSYLEKLTVDSKENSPANSCGEKAVQTVSERTAAPMTYG 748

Query: 647 DGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVS-EVSVDLVALG 705
           D P  E+LSL+ SL AVR +  AA  + Q FR++SF+ +Q     DD   ++S  L    
Sbjct: 749 DVP--EKLSLKDSLTAVRNATQAADRLHQVFRMQSFQRKQLCDIGDDEKIDISDQLAVSF 806

Query: 706 SLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKK 765
           + +K       +  L  AA  IQ+KYRGWK RK+FL IR  IVK+QAHVRGHQVRKQY+ 
Sbjct: 807 AASKTKNPGQGDVSLSCAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRT 866

Query: 766 VVWSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASEN---------EKTDEYEFLRIGR 816
           V+WSV ++EK ILRWRR+G+GLRGF+       V  E           + DEY++L+ GR
Sbjct: 867 VIWSVGLLEKIILRWRRKGNGLRGFKRNAVAKTVEPEPPVSAICPRIPQEDEYDYLKEGR 926

Query: 817 KQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFK 854
           KQ    ++KAL RVKSMV+ PEARDQY R++   E F+
Sbjct: 927 KQTEERLQKALTRVKSMVQYPEARDQYRRLLTVVEGFR 964

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'. Activates the expression of the V-PPase proton pump in pollen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1

 Score =  360 bits (923), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 225/559 (40%), Positives = 331/559 (59%), Gaps = 35/559 (6%)

Query: 305 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRC 364
           Q F+I+D SPDW Y+   TKV+IIG FL      +++ W CMFG  +VP E++ + VIRC
Sbjct: 444 QKFTIQDISPDWGYANETTKVIIIGSFLCDP---TESTWSCMFGNAQVPFEIIKEGVIRC 500

Query: 365 QAPSHAAGRVPFYITGSNRLACSEVREFEYREKPS----KAGYPVASKIAPE-DEVRLQT 419
           +AP    G+V   IT  + L CSE+REFEYREKP     K   P  S ++   +E+ L  
Sbjct: 501 EAPQCGPGKVNLCITSGDGLLCSEIREFEYREKPDTCCPKCSEPQTSDMSTSPNELILLV 560

Query: 420 RLAKFLYLD--PERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPN 477
           R  + L  D   ERK     +E  N       +  ++ D ++ W  V  + +       +
Sbjct: 561 RFVQTLLSDRSSERK---SNLESGND----KLLTKLKADDDQ-WRHVIGTIIDGSASSTS 612

Query: 478 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGV 537
           + D L+Q LL+++L  WL  +  +       +    QG++H+ A LG+EWA  PI+A GV
Sbjct: 613 TVDWLLQELLKDKLDTWLSSRSCDEDYITCSLSKQEQGIIHMVAGLGFEWAFYPILAHGV 672

Query: 538 SPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGH 597
           + +FRD +G +ALHWA+ FG E+ V  L+  GA+ GAV DP+   P G+TAA +A+S GH
Sbjct: 673 NVDFRDIKGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASIAASNGH 732

Query: 598 KGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLR 657
           KG+AGYL+E  L++HLSSLT+ E       A +  EK   T   I  QS     +Q+SL+
Sbjct: 733 KGLAGYLSEVALTNHLSSLTLEETENSKDTAQVQTEK---TLNSISEQSPSGNEDQVSLK 789

Query: 658 GSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSS-----DDVSEVSVDLVALGSLNKVSK 712
            +LAAVR +A AAA IQ AFR  SFR R+  +++      +      D+  + +++K++ 
Sbjct: 790 DTLAAVRNAAQAAARIQAAFRAHSFRKRKQREAALVACLQEYGMYCEDIEGISAMSKLT- 848

Query: 713 MIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSI 772
                +Y + AA+ IQ+ +RG+K RK FL++R  +VK+QAHVRG+Q+RK YK + W+V I
Sbjct: 849 FGKGRNY-NSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWAVRI 907

Query: 773 VEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKF-AGVEKALERVK 831
           ++K +LRWRR+G GLRGFR      +V S  +  DE + L++ RKQK    V +A  RV 
Sbjct: 908 LDKVVLRWRRKGVGLRGFR-----QDVESTEDSEDE-DILKVFRKQKVDVAVNEAFSRVL 961

Query: 832 SMVRNPEARDQYMRMVAKF 850
           SM  +PEAR QY R++ ++
Sbjct: 962 SMSNSPEARQQYHRVLKRY 980

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|O23463|CMTA5_ARATH Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2

 Score =  292 bits (748), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 203/627 (32%), Positives = 307/627 (48%), Gaps = 37/627 (5%)

Query: 244 DSFGRWMDQEIG---GDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPS 300
           DSFGRW++  I    G  DD  + +        +     D        H   ++      
Sbjct: 323 DSFGRWVNNFISDSPGSVDDPSLEA--------VYTPGQDSSTPPTVFHSHSDIP----- 369

Query: 301 LSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDN 360
              EQ+F+I D SP WAYS  +TK+L+ G F  + +    +   C+ GE+ VPAE L   
Sbjct: 370 ---EQVFNITDVSPAWAYSTEKTKILVTGFFHDSFQHLGRSNLICICGELRVPAEFLQMG 426

Query: 361 VIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYRE-KPSKAGYPVASKIAPEDEVRLQT 419
           V RC  P  + G V  Y++       S++  FE+R  +  +   P   ++   +E   Q 
Sbjct: 427 VYRCFLPPQSPGVVNLYLSVDGNKPISQLFSFEHRSVQFIEKAIPQDDQLYKWEEFEFQV 486

Query: 420 RLAKFLYLDPER-KWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNS 478
           RLA  L+    +       I   N  + K  + S        W  + +S  A E     +
Sbjct: 487 RLAHLLFTSSNKISVLTSKISPENLLEAKK-LASRTSHLLNSWAYLMKSIQANEVPFDQA 545

Query: 479 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS 538
           RD L +  L+NRL EWL+ K+ E  +     D  G GV+HL A LGY W++       +S
Sbjct: 546 RDHLFELTLKNRLKEWLLEKVIEN-RNTKEYDSKGLGVIHLCAVLGYTWSILLFSWANIS 604

Query: 539 PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHK 598
            +FRD +G TALHWA+Y+GRE+ V  L+  GA P  V DPT  F GG TAADLA  +G+ 
Sbjct: 605 LDFRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTKEFLGGCTAADLAQQKGYD 664

Query: 599 GIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRG 658
           G+A +LAE  L +    +    N   N+    A + +N   A           E+ SL+ 
Sbjct: 665 GLAAFLAEKCLVAQFKDMQTAGNISGNLETIKAEKSSNPGNAN---------EEEQSLKD 715

Query: 659 SLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIHFED 718
           +LAA R +A AAA IQ AFR    + R S        E + +++A   +    +      
Sbjct: 716 TLAAYRTAAEAAARIQGAFREHELKVRSSAVRFASKEEEAKNIIAAMKIQHAFRNFEVRR 775

Query: 719 YLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAIL 778
            +  AA +IQ +++ WK R++FL +R   +++QA  RG QVR+QY+K+ WSV ++EKAIL
Sbjct: 776 KIA-AAARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQYQKITWSVGVLEKAIL 834

Query: 779 RWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPE 838
           RWR +  G RG +V        SE  +    +F +  +KQ    +E+++ +V++M R+ +
Sbjct: 835 RWRLKRKGFRGLQVSQPDEKEGSEAVE----DFYKTSQKQAEERLERSVVKVQAMFRSKK 890

Query: 839 ARDQYMRMVAKFENFKMCDDGSGLLSQ 865
           A+  Y RM    E  ++  DG   L Q
Sbjct: 891 AQQDYRRMKLAHEEAQLEYDGMQELDQ 917

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'. Activates the expression of the V-PPase proton pump in pollen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSP8|CMTA6_ARATH Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 PE=2 SV=1

 Score =  281 bits (719), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 201/619 (32%), Positives = 305/619 (49%), Gaps = 60/619 (9%)

Query: 244 DSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGP---- 299
           +SFGRWM+         S ++  +G+            E  S    +    D L P    
Sbjct: 237 ESFGRWMN---------SFISESNGSL-----------EDPSFEPMVMPRQDPLAPQAVF 276

Query: 300 ---SLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEV 356
              S   EQ+F+I D SP WAYS  +TK+L+ G    + +    +   C+ G+  VPAE 
Sbjct: 277 HSHSNIPEQVFNITDVSPAWAYSSEKTKILVTGFLHDSYQHLERSNLYCVCGDFCVPAEY 336

Query: 357 LTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPED--- 413
           L   V RC  P H+ G V  Y++       S+   FE+R        PV  K  PED   
Sbjct: 337 LQAGVYRCIIPPHSPGMVNLYLSADGHKPISQCFRFEHR------AVPVLDKTVPEDNQD 390

Query: 414 ----EVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPM 469
               E   Q RL+  L+    +     +    +  +    + S        W  + +S  
Sbjct: 391 SKWEEFEFQVRLSHLLFTSSNKLNVLSSKISPHNLRDAKKLASKTNHLLNSWAYLVKSIQ 450

Query: 470 AIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAM 529
             +     ++D L +  L+NRL EWL+ K+ EG    +  D  G GV+HL A+LGY W++
Sbjct: 451 GNKVSFDQAKDHLFELSLKNRLKEWLMEKVLEGRNTLDY-DSKGLGVIHLCASLGYTWSV 509

Query: 530 RPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAA 589
           +    +G+S NFRD +G TALHWA+Y+GRE+ V  L+  GA P  V D T    GG  AA
Sbjct: 510 QLFSLSGLSLNFRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVTDSTKDNLGGCMAA 569

Query: 590 DLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGP 649
           DLA   G+ G+A YLAE  L +    + +      N+   L A K     A++  Q   P
Sbjct: 570 DLAQQNGYDGLAAYLAEKCLVAQFRDMKI----AGNITGDLEACK-----AEMLNQGTLP 620

Query: 650 AAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQS--IQSSDDVSEVSVDLVALGSL 707
             EQ SL+ +LAA R +A AAA IQ AFR ++ +  +S  IQ ++   E    + A+   
Sbjct: 621 EDEQ-SLKDALAAYRTAAEAAARIQGAFREKALKAARSSVIQFANKEEEAKSIIAAMKIQ 679

Query: 708 NKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVV 767
           N   K          AA +IQ +++ WK R+++L +R   +++QA  RG Q R+QYKK++
Sbjct: 680 NAFRKYDTRRKIE--AAYRIQCRFQTWKIRREYLNMRRQAIRIQAAFRGLQARRQYKKIL 737

Query: 768 WSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKAL 827
           WSV ++EKA+LRWR++  G RG +V     +     E     +F +  ++Q    +E+++
Sbjct: 738 WSVGVLEKAVLRWRQKRKGFRGLQVAAEEDSPGEAQE-----DFYKTSQRQAEERLERSV 792

Query: 828 ERVKSMVRNPEARDQYMRM 846
            RV++M R+ +A+  Y RM
Sbjct: 793 VRVQAMFRSKKAQQDYRRM 811

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|O94983|CMTA2_HUMAN Calmodulin-binding transcription activator 2 OS=Homo sapiens GN=CAMTA2 PE=1 SV=3

 Score = 69.7 bits (169), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 127/337 (37%), Gaps = 80/337 (23%)

Query: 297 LGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEV 356
           L P+LS     +I DFSP+W+Y     KVLI G +       +   + C+F  I VPA +
Sbjct: 528 LSPALS-----TITDFSPEWSYPEGGVKVLITGPWT-----EAAEHYSCVFDHIAVPASL 577

Query: 357 LTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVR 416
           +   V+RC  P+H  G V   + G              RE P  A             V 
Sbjct: 578 VQPGVLRCYCPAHEVGLVSLQVAG--------------REGPLSAS------------VL 611

Query: 417 LQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRV-----------D 465
            + R  +FL L   +   D    D N+ ++  +I       EK    +           D
Sbjct: 612 FEYRARRFLSLPSTQ--LDWLSLDDNQFRM--SILERLEQMEKRMAEIAAAGQVPCQGPD 667

Query: 466 ESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDG----GQGVVHLAA 521
             P+  EG  P    +++  +L   +     W      KGP  +  G    G  ++HLAA
Sbjct: 668 APPVQDEGQGPGFEARVV--VLVESMIPRSTW------KGPERLAHGSPFRGMSLLHLAA 719

Query: 522 ALGYEWAMRPI-----IATG-------VSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
           A GY   +  +     + TG       V P   D    T L WA   G  E  ++L +  
Sbjct: 720 AQGYARLIETLSQWRSVETGSLDLEQEVDPLNVDHFSCTPLMWACALGHLEAAVLLFRWN 779

Query: 570 AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE 606
               ++ D       G+    +A SRGH  +A  L E
Sbjct: 780 RQALSIPDSL-----GRLPLSVAHSRGHVRLARCLEE 811

Transcription activator. May act as tumor suppressor.

Homo sapiens (taxid: 9606)

>sp|Q9Y6Y1|CMTA1_HUMAN Calmodulin-binding transcription activator 1 OS=Homo sapiens GN=CAMTA1 PE=1 SV=4

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 128/320 (40%), Gaps = 45/320 (14%)

Query: 305  QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRC 364
            ++F + D+SP+W+Y     KVLI G +       +   + C+F +I VPA ++   V+RC
Sbjct: 869  RVFMVTDYSPEWSYPEGGVKVLITGPWQ-----EASNNYSCLFDQISVPASLIQPGVLRC 923

Query: 365  QAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRL---QTRL 421
              P+H  G V   +  +N++  + V  FEY+ +      P     +  D + L   Q R+
Sbjct: 924  YCPAHDTGLVTLQVAFNNQIISNSVV-FEYKAR----ALPTLPS-SQHDWLSLDDNQFRM 977

Query: 422  AKFLYLDP-ERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVD-ESPMAIEGDCPNSR 479
            +    L+  ER+  + T    +K             S     +    S     G C  SR
Sbjct: 978  SILERLEQMERRMAEMTGSQQHKQASGGGSSGGGSGSGNGGSQAQCASGTGALGSCFESR 1037

Query: 480  DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDG---GQGVVHLAAALGYEWAMRPIIA-- 534
              ++   + +R C W         K  ++I      G  ++HLAAA GY   ++ +I   
Sbjct: 1038 VVVVCEKMMSRAC-W--------AKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWR 1088

Query: 535  ----------TGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPG 584
                        V P   D    T L WA   G  E  ++L K      ++ D     P 
Sbjct: 1089 TKHADSIDLELEVDPLNVDHFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPL 1148

Query: 585  GQTAADLASSRGHKGIAGYL 604
            G     +A SRGH  +A  L
Sbjct: 1149 G-----IARSRGHVKLAECL 1163

Transcriptional activator. May act as a tumor suppressor.

Homo sapiens (taxid: 9606)

>sp|A2A891|CMTA1_MOUSE Calmodulin-binding transcription activator 1 OS=Mus musculus GN=Camta1 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 45/320 (14%)

Query: 305  QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRC 364
            ++F + D+SP+W+Y     KVLI G +       +   + C+F +I VPA ++   V+RC
Sbjct: 871  RVFMVTDYSPEWSYPEGGVKVLITGPWQ-----EASNNYSCLFDQISVPASLIQPGVLRC 925

Query: 365  QAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRL---QTRL 421
              P+H  G V   +  +N++  + V  FEY+ +      P     +  D + L   Q R+
Sbjct: 926  YCPAHDTGLVTLQVAFNNQIISNSVV-FEYKAR----ALPTLPS-SQHDWLSLDDNQFRM 979

Query: 422  AKFLYLDP-ERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVD-ESPMAIEGDCPNSR 479
            +    L+  ER+  + T    +K             S    G+    S     G C  SR
Sbjct: 980  SILERLEQMERRMAEMTGSQQHKQASGGGGSGSGSGSGAGGGQAQCASGAGTLGSCFESR 1039

Query: 480  DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDG---GQGVVHLAAALGYEWAMRPIIA-- 534
              ++   + +R C W         K  ++I      G  ++HLAAA GY   ++ +I   
Sbjct: 1040 VVVVCEKMMSRAC-W--------AKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWR 1090

Query: 535  ----------TGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPG 584
                        V P   D    T L WA   G  E  ++L K      ++ D     P 
Sbjct: 1091 TKHADSIDLELEVDPLNVDHFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPL 1150

Query: 585  GQTAADLASSRGHKGIAGYL 604
            G     +A SRGH  +A  L
Sbjct: 1151 G-----IARSRGHVKLAECL 1165

Transcriptional activator.

Mus musculus (taxid: 10090)

>sp|Q80Y50|CMTA2_MOUSE Calmodulin-binding transcription activator 2 OS=Mus musculus GN=Camta2 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 130/326 (39%), Gaps = 56/326 (17%)

Query: 298 GPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVL 357
            P LS   L +I DFSP+W+Y     KVLI G +       +   + C+F  I VPA ++
Sbjct: 532 APQLS-PALNAITDFSPEWSYPEGGVKVLITGPWT-----EAAEHYSCVFDHIAVPASLV 585

Query: 358 TDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRL 417
              V+RC  P+H  G V   + G      + V  FEYR +                 + L
Sbjct: 586 QPGVLRCYCPAHEVGLVSLQVAGREGPLSASVL-FEYRAR---------------RFLSL 629

Query: 418 QTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDES-PMAIEGDCP 476
            +    +L LD + ++    +E   + + +    +  G +    G+  E+ P+  EG  P
Sbjct: 630 PSTQLDWLSLD-DSQFRMSILERLEQMEKRMAEIAAAGQAP---GQGPEAPPIQDEGQGP 685

Query: 477 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDG----GQGVVHLAAALGYEWAMRPI 532
               +++  +L   +     W      +GP  +  G    G  ++HLAAA GY   +  +
Sbjct: 686 GFEARVV--VLVESMIPRSTW------RGPERLIHGSPFRGMSLLHLAAAQGYARLIETL 737

Query: 533 -----IATG-------VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTP 580
                + TG       V P   D    T L WA   G  E  ++L        ++ D   
Sbjct: 738 SQWRSVETGSLDLEQEVDPLNVDHFSCTPLMWACALGHLEAAVLLFCWNRQALSIPDSL- 796

Query: 581 AFPGGQTAADLASSRGHKGIAGYLAE 606
               G+    +A SRGH  +A  L E
Sbjct: 797 ----GRLPLSVAHSRGHVRLARCLEE 818

Transcription activator. May act as tumor suppressor.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	885
225432151	1018	PREDICTED: calmodulin-binding transcript	0.981	0.853	0.639	0.0
255556532	999	calmodulin-binding transcription activat	0.954	0.845	0.620	0.0
224112060	933	predicted protein [Populus trichocarpa]	0.905	0.858	0.622	0.0
356564670	999	PREDICTED: calmodulin-binding transcript	0.943	0.835	0.584	0.0
449485221	989	PREDICTED: calmodulin-binding transcript	0.924	0.827	0.528	0.0
365927834	939	calmodulin-binding transcription factor	0.897	0.845	0.504	0.0
449460391	890	PREDICTED: calmodulin-binding transcript	0.828	0.823	0.513	0.0
224083672	994	predicted protein [Populus trichocarpa]	0.653	0.581	0.491	1e-155
357113656	1034	PREDICTED: calmodulin-binding transcript	0.659	0.564	0.485	1e-153
108706603	1029	anther ethylene-upregulated protein ER1,	0.662	0.569	0.477	1e-152

>gi|225432151|ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription activator 1 [Vitis vinifera] gi|297736797|emb|CBI25998.3| unnamed protein product [Vitis vinifera]

 Score = 1091 bits (2822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/893 (63%), Positives = 678/893 (75%), Gaps = 24/893 (2%)

Query: 5    QGYKSGRSA-----ADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAV 59
            +GYK+  S      A P SQI + Q SSA  L+Q N+     Q S+AS PN  DW+GQ +
Sbjct: 137  EGYKTSTSVPRLPNAVPASQIGTIQGSSAPCLSQGNAPTVTGQISYASSPNTADWSGQTL 196

Query: 60   SSEFEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHP--QWFAGSKINHG 117
            SSEFED DSG   GT S+AQ I GS+  NASL     +G   LSR+      AG   +HG
Sbjct: 197  SSEFEDGDSGDDPGTSSLAQPILGSVFYNASLPTHEASGFAGLSRNQLGSGLAGVHFSHG 256

Query: 118  SGSSMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTC 177
            + +S+  +I  SS   +SV DQ     F   QP+GADFIT+KLTDARL SD T+ N    
Sbjct: 257  ASTSVQDEIHGSS---SSVHDQ----KFGFEQPNGADFITNKLTDARLDSDRTVQNFAAR 309

Query: 178  GERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQAGIKPKEE- 236
            G+ L   +D+  +T +SQ A Q  LEHNF+L++ Q QNC    V   S +    K KE+ 
Sbjct: 310  GDGLSPALDIKGLTAASQRAVQGPLEHNFHLVHPQFQNCSSSHVADTSTAHIENKSKEDG 369

Query: 237  -----LGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQ 291
                  GELKKLDSFGRWMD+EIGGDCDDSLMASDSGNYWNTLD +NDDKEVSSLS HMQ
Sbjct: 370  ANNDASGELKKLDSFGRWMDKEIGGDCDDSLMASDSGNYWNTLDTQNDDKEVSSLSRHMQ 429

Query: 292  LEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIE 351
            L++DSL PSLSQEQLF+I DFSPDWAYS  ETKVLIIG FLG  + S++TKW CMFGEIE
Sbjct: 430  LDIDSLAPSLSQEQLFTINDFSPDWAYSEDETKVLIIGTFLGGMEHSTNTKWCCMFGEIE 489

Query: 352  VPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAP 411
            V AEVLT+NVIRC AP HA GRVPFY+T SNRLACSEVREFEYREKPS+  + +A +  P
Sbjct: 490  VSAEVLTNNVIRCHAPLHAPGRVPFYVTCSNRLACSEVREFEYREKPSRVAFSMAVRSTP 549

Query: 412  EDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAI 471
            ED+V+ Q +LAK L+L  ERKW DC+IE+C+KCK+K+ IYS + D + DW  ++ +   I
Sbjct: 550  EDDVQFQIQLAKMLHLGQERKWLDCSIEECDKCKIKSDIYSKKDDIKNDWEELEMAKDFI 609

Query: 472  EGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRP 531
             G+  N RD LI+NLL++RL EWLV K+HEG +GP+V+D  GQGV+HLAAALGYEWAM P
Sbjct: 610  -GNHVNPRDVLIKNLLKDRLFEWLVCKVHEGVRGPHVLDGKGQGVIHLAAALGYEWAMGP 668

Query: 532  IIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADL 591
            II  GVSPNFRDARGRT LHWASYFGREETVI LVKLG +P AVEDPTPAFPGGQTAADL
Sbjct: 669  IIVAGVSPNFRDARGRTGLHWASYFGREETVIALVKLGTSPDAVEDPTPAFPGGQTAADL 728

Query: 592  ASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAA 651
            ASSRGHKGIAGYLAEA LSSHL SL+ +EN MD+V+A +AAEKA +TA Q     DG   
Sbjct: 729  ASSRGHKGIAGYLAEAHLSSHLCSLSPSENVMDSVSANIAAEKAAQTAVQ---NVDGVIE 785

Query: 652  EQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVS 711
            EQLSL+GSLAA+RKSAHAAALIQ A R RSFR R+  +S+DD+SE S+DLVALGSLNKVS
Sbjct: 786  EQLSLKGSLAALRKSAHAAALIQAALRARSFRDRRLTRSNDDISEASLDLVALGSLNKVS 845

Query: 712  KMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVS 771
            KM HF+DYLH AA+KIQQKYRGWKGR+DFLKIR+ IVK+QAHVRGHQVRKQYKKVVWSV 
Sbjct: 846  KMGHFKDYLHSAAVKIQQKYRGWKGREDFLKIRSRIVKIQAHVRGHQVRKQYKKVVWSVG 905

Query: 772  IVEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVK 831
            IVEKAILRWRR+GSGLRGFR+     N   E  KTDEY++LR+GR+QKFAGVEKAL RV+
Sbjct: 906  IVEKAILRWRRKGSGLRGFRLEKPIGNAVPEVGKTDEYDYLRVGRRQKFAGVEKALARVQ 965

Query: 832  SMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVAD 884
            SMVR+PEARDQYMR+V+KF+N ++ D+GS  L Q E S     +++L +++AD
Sbjct: 966  SMVRHPEARDQYMRLVSKFDNLQIGDEGSSALQQAEKSEKLIKEEDLGSFIAD 1018

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556532|ref|XP_002519300.1| calmodulin-binding transcription activator (camta), plants, putative [Ricinus communis] gi|223541615|gb|EEF43164.1| calmodulin-binding transcription activator (camta), plants, putative [Ricinus communis]

 Score = 1050 bits (2714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/870 (62%), Positives = 658/870 (75%), Gaps = 25/870 (2%)

Query: 5   QGYKSGRS--AADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSE 62
           +GY+SG S   ++P +Q++SSQ SSA SLAQ  S A   QTS+AS PN++DWNGQ +SSE
Sbjct: 145 EGYRSGVSHLLSEPSAQVDSSQPSSAPSLAQTASPAFTGQTSYASSPNRVDWNGQTLSSE 204

Query: 63  FEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHP--QWFAGSKINHGSGS 120
            EDVDS        + + +YGS      L+   + G P +SR+P   WF GSK    + S
Sbjct: 205 SEDVDSRDNLRASPLTEPVYGS------LLGTDVEGFPMISRNPPESWFIGSKFGQRTES 258

Query: 121 SMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGER 180
           S+WP+I +SS++A  V DQ       VG+ SGADFITHKL D RL  DS   +  T G R
Sbjct: 259 SLWPEIPSSSKSADHVQDQKS----CVGEHSGADFITHKLRDPRL--DSNGPDTVTIGGR 312

Query: 181 LITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVS-QAGIKPKEELGE 239
           LI+++D  AV    Q   +++ EH+FNLI  +  N    +     +  + G     ELGE
Sbjct: 313 LISNMDDDAVAAVHQ---KIIQEHDFNLIPPRFLNFSGTQNDDYFLQPEDGSANDSELGE 369

Query: 240 LKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGP 299
           LKKLDSFGRWMD+EIGGDCDDSLMASDSGNYWNTL AEN++KEVSSLSHHMQL+++SLGP
Sbjct: 370 LKKLDSFGRWMDKEIGGDCDDSLMASDSGNYWNTLGAENEEKEVSSLSHHMQLDIESLGP 429

Query: 300 SLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTD 359
           SLSQEQLFSI DFSPDWAYSG ETKVLIIG FLG+KK SS+ KWGCMFGEIEV AEVLT+
Sbjct: 430 SLSQEQLFSIHDFSPDWAYSGVETKVLIIGTFLGSKKFSSERKWGCMFGEIEVSAEVLTN 489

Query: 360 NVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQT 419
           NV++CQAP H +GRVPFYIT  NRLACSEVREFEYR+ PS     ++ +   ++E++LQ 
Sbjct: 490 NVVKCQAPLHVSGRVPFYITCRNRLACSEVREFEYRDNPSSIA-SLSVRSVQQEELQLQV 548

Query: 420 RLAKFLYLDPERKWFDCTIEDCNKCK-LKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNS 478
           RLAK LYL PERKW +C+ E CNKCK L++T+YS+R  S KD+ R+ E     E +C NS
Sbjct: 549 RLAKLLYLGPERKWLNCSSEGCNKCKRLRSTLYSIRNYSNKDYTRIREDCTVSEVNCTNS 608

Query: 479 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS 538
           RD+LI +LL+++LCEWLV K+HE GKG +V+DD GQGV+HLAA+LGYEWAM  I+A   +
Sbjct: 609 RDELIHSLLKDKLCEWLVCKVHE-GKGLDVLDDEGQGVMHLAASLGYEWAMGLIVAVSNN 667

Query: 539 PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHK 598
           PNFRDA+GRTALHWASYFGREETVI LV LG  P AV+DPTPAFPGG+ AADLAS++GHK
Sbjct: 668 PNFRDAQGRTALHWASYFGREETVIALVSLGVDPTAVDDPTPAFPGGRVAADLASNQGHK 727

Query: 599 GIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQ-IGVQSDGPAAEQLSLR 657
           GIAGYLAEA L+  LSSL +NEN  ++V A +AAE+A E AA  + + S+G   +QLSL+
Sbjct: 728 GIAGYLAEAFLTRQLSSLNINENATNSVDATIAAEQATELAAALVALPSNGRVDDQLSLK 787

Query: 658 GSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIHFE 717
           GSLAAVRKSA AAALIQ  FR  SF++RQ  + +DD SEVS+DL ALGSLNK  +  HFE
Sbjct: 788 GSLAAVRKSALAAALIQATFRSYSFQYRQLPKGTDD-SEVSLDLAALGSLNKDQRSRHFE 846

Query: 718 DYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAI 777
           DYLH AA+KIQQKYRGWKGRK+FLKIRN IVK+QAHVRG +VRKQYKKV+WSVSIVEKAI
Sbjct: 847 DYLHSAAVKIQQKYRGWKGRKEFLKIRNRIVKIQAHVRGRKVRKQYKKVIWSVSIVEKAI 906

Query: 778 LRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNP 837
           LRWRR+ SGLRGF V  +T +V +E +++DEYEFLRI RKQK+AGVEKAL RV+SM R+P
Sbjct: 907 LRWRRKRSGLRGFHVEKTTGDVTTETDRSDEYEFLRISRKQKYAGVEKALARVQSMARDP 966

Query: 838 EARDQYMRMVAKFENFKMCDDGSGLLSQGE 867
            ARDQYMR+V K E  KM D+G  +  Q E
Sbjct: 967 AARDQYMRLVTKSEKLKMSDEGISISRQDE 996

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112060|ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|222865111|gb|EEF02242.1| predicted protein [Populus trichocarpa]

 Score = 1038 bits (2683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/859 (62%), Positives = 631/859 (73%), Gaps = 58/859 (6%)

Query: 5   QGYKSG--RSAADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSE 62
           +GYKSG  R   D G+Q+E+ Q S   S AQA S A   QTS+AS PN+IDWNG+A+SSE
Sbjct: 124 EGYKSGVSRLLEDSGTQVENLQPSPVTSFAQAASPASTVQTSYASSPNRIDWNGKALSSE 183

Query: 63  FEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGSKINHGSGSSM 122
           FEDVDS +G GT S+AQSI+GSMS N+SL++  +               +K + G+ SS+
Sbjct: 184 FEDVDSRNGPGTSSLAQSIHGSMSHNSSLLSPRVE--------------AKFDLGTQSSL 229

Query: 123 WPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERLI 182
            P+I +S R+ + +      Q F+V QP GA+FIT+KLTDA L     IA   T      
Sbjct: 230 LPEISSSERSVSRL----PGQKFFVDQPGGAEFITNKLTDATLEG---IAVPDT------ 276

Query: 183 TDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQAGIKPKE------E 236
                              +E +FNLI+ Q  N    +   AS +Q   K  +      E
Sbjct: 277 -------------------VELDFNLISPQLHNLSGTQTVAASTAQVENKANDGGANNIE 317

Query: 237 LGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDS 296
            GELKKLDSFGRWMD+EIGGDCDDSLMASDSGNYW+TL AEN+DKEVSSLSHHMQL+ DS
Sbjct: 318 SGELKKLDSFGRWMDKEIGGDCDDSLMASDSGNYWSTLSAENEDKEVSSLSHHMQLDTDS 377

Query: 297 LGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEV 356
           LGPSLSQ+QLFSIRDFSPDWAYSG +TKVLIIG FLG+KK SS+TKWGCMFGEIEV AEV
Sbjct: 378 LGPSLSQDQLFSIRDFSPDWAYSGVDTKVLIIGTFLGSKKFSSETKWGCMFGEIEVSAEV 437

Query: 357 LTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKP-SKAGYPVASKIAPEDEV 415
           L D VIRCQ P HA GRVPFYIT  NRL+CSEVREFEYRE P   A  P  S  A ++E+
Sbjct: 438 LNDCVIRCQVPQHAPGRVPFYITCRNRLSCSEVREFEYRENPFGTASLPAES--AQQEEI 495

Query: 416 RLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDC 475
             Q RL+K LYL P  K  +C+IEDC +CK+ +T++S+R DS+ D G+V ++ M   GD 
Sbjct: 496 LFQMRLSKLLYLGPGMKSSNCSIEDCERCKI-STLFSLRNDSKGDLGKVQDNCMVAVGDG 554

Query: 476 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT 535
              RDKLIQ+LL +RLCEWL  K+HEG KG +V+D  GQGV+HLAA+LGYEWAM  I+A 
Sbjct: 555 IGFRDKLIQSLLMDRLCEWLACKVHEGDKGSDVLDGEGQGVIHLAASLGYEWAMDLIVAA 614

Query: 536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595
           G +PNFRDARGRTALHWASYFGREETVI L++L A P AV+DP PAFPGGQ+AADLAS R
Sbjct: 615 GGNPNFRDARGRTALHWASYFGREETVIALIRLDADPTAVDDPNPAFPGGQSAADLASCR 674

Query: 596 GHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLS 655
           GHKGI+GYLAEA LS HLSSL +++N MD+  AA+AAEK  + AAQ+   S     E LS
Sbjct: 675 GHKGISGYLAEAFLSRHLSSLKIDQNEMDHDTAAMAAEKETDIAAQVASLSSKGEYELLS 734

Query: 656 LRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIH 715
           L+GSLAAVRKSA A ALI  A+R  SFR RQ  +SSDD+SE+S+DL ALGSLN V +  H
Sbjct: 735 LKGSLAAVRKSARAVALIHAAYRTSSFRQRQLAKSSDDISEISLDLAALGSLNMVQRRGH 794

Query: 716 FEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEK 775
           FEDYLH AA+KIQQKYRGWKGRKDFLKIRN IVK+QAHVRGHQVRKQYKKVVWSV IVEK
Sbjct: 795 FEDYLHSAAVKIQQKYRGWKGRKDFLKIRNRIVKIQAHVRGHQVRKQYKKVVWSVGIVEK 854

Query: 776 AILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVR 835
           AILRWRR+ +GLRGFR+     +V  E+E  DEY+FLRI RKQKFAGVEKAL RV SMVR
Sbjct: 855 AILRWRRKRTGLRGFRLEKKIGDVKPESENADEYDFLRISRKQKFAGVEKALARVTSMVR 914

Query: 836 NPEARDQYMRMVAKFENFK 854
           +PEAR+QYMRMV KFEN K
Sbjct: 915 HPEAREQYMRMVTKFENIK 933

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564670|ref|XP_003550574.1| PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max]

 Score =  927 bits (2395), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/877 (58%), Positives = 614/877 (70%), Gaps = 42/877 (4%)

Query: 5   QGYKSGRS--AADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSE 62
           +G KSG S     P + + SSQ +S  S  + NS     QTS  S  NK+  NG+A  SE
Sbjct: 137 EGCKSGISHLPVVPVTLVGSSQNTSVLSSTKINSPISLVQTSFTSSANKVYQNGRA--SE 194

Query: 63  FEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHP---QWFAG-SKINHGS 118
            EDV+S +G    S AQ I   +  +A  +    AG  EL R+P    W +     + G+
Sbjct: 195 HEDVNSKNGPQASSHAQPISNYVLHSAPWLTHEAAGFSELLRNPLISSWPSSFPSYSPGT 254

Query: 119 GSSMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCG 178
           G S W  I NSSRN  ++ D   H      + S AD    KL++A L S   + +     
Sbjct: 255 GLSPWTSIQNSSRNTINMHDGKHHV-----EASEADLTVRKLSNAGLDSVHRMQDGVIFR 309

Query: 179 ERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNC---PVPEVTVASVSQ----AGI 231
           +RLITD+ V  V       +QV  EH  +  + Q  +    PV   T   V Q     G+
Sbjct: 310 DRLITDMCVQPVIDLPT-VNQVKNEHGLDSFHAQVHDHNDHPVVATTKILVEQKLQDGGL 368

Query: 232 KPKE----ELGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLS 287
              E    E GE+KKLDSFGRWMD+EIGGDCD+SLMASDSGNYW+TLDA ++DKEVSSL 
Sbjct: 369 YNDESEQVEYGEMKKLDSFGRWMDKEIGGDCDNSLMASDSGNYWSTLDAHSEDKEVSSL- 427

Query: 288 HHMQLEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF 347
            HMQL++DSLGPSLSQEQLFSI DFSPDWAY+G  TKVLI+G FLG+KK SS+TKWGCMF
Sbjct: 428 RHMQLDVDSLGPSLSQEQLFSIHDFSPDWAYTGVRTKVLIVGTFLGSKKPSSETKWGCMF 487

Query: 348 GEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVAS 407
           GEIEV AEVL DNVIRCQ P H+ GRVPFYIT SNRLACSEVREFE+ E P+K   P   
Sbjct: 488 GEIEVSAEVLADNVIRCQTPLHSPGRVPFYITCSNRLACSEVREFEFDENPTKFLGPEGI 547

Query: 408 KIAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDES 467
           KI+PE+EVRLQ RL K + L P+ KW  C++ +C KCKLK T+YS+R DS      V E 
Sbjct: 548 KISPEEEVRLQMRLLKLVDLGPDNKWLKCSVSECEKCKLKGTMYSVRDDSG-----VFEE 602

Query: 468 PMAIEG-DCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYE 526
              I+G    N RD L Q L+R++L EWL++K+HEGGKGP+V+DD GQGV+HLAAALGY 
Sbjct: 603 TFQIDGIGHINHRDILFQRLVRDKLYEWLIYKVHEGGKGPHVLDDEGQGVIHLAAALGYV 662

Query: 527 WAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQ 586
           WAM P++A G+SPNFRD+RGRT LHWASYFGREETVI+LV+LGA PGAVEDPT AFP GQ
Sbjct: 663 WAMAPLVAAGISPNFRDSRGRTGLHWASYFGREETVIVLVQLGATPGAVEDPTSAFPRGQ 722

Query: 587 TAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQS 646
           TAADL SSRGHKGIAGYLAEADL++ LS LTV EN   N+A  +AA  A ++     V+ 
Sbjct: 723 TAADLGSSRGHKGIAGYLAEADLTNQLSVLTVKENETGNIATTIAANSALQS-----VED 777

Query: 647 DGPAA---EQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVA 703
           D  +    EQ  L+ SLA  +KSAHAAA I  AFR RSF  RQ  QSS D+SEV +D+VA
Sbjct: 778 DSSSMTMDEQHYLKESLAVFQKSAHAAASILAAFRARSFCQRQLAQSSSDISEV-LDVVA 836

Query: 704 LGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQY 763
             SL+KV    HFEDYLHFAA+KIQ++YRGWKGRKDFLKIR+ IVK+QAH+RGHQVRKQY
Sbjct: 837 -DSLSKVQNKGHFEDYLHFAALKIQKRYRGWKGRKDFLKIRDRIVKIQAHIRGHQVRKQY 895

Query: 764 KKVVWSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGV 823
           KKVVWSVSIVEKAILRWRR+G+GLRGFRVG     V  + EK+DEYEFL IGR+QK   V
Sbjct: 896 KKVVWSVSIVEKAILRWRRKGAGLRGFRVGQPVGVVVKDAEKSDEYEFLSIGRRQKSDDV 955

Query: 824 EKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGS 860
           +KAL+RVKSMVRNPEARDQYMR++ K+E FK+ D GS
Sbjct: 956 KKALDRVKSMVRNPEARDQYMRLIMKYEKFKIDDGGS 992

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449485221|ref|XP_004157104.1| PREDICTED: calmodulin-binding transcription activator 2-like [Cucumis sativus]

 Score =  823 bits (2126), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/883 (52%), Positives = 565/883 (63%), Gaps = 65/883 (7%)

Query: 5   QGYKSG--RSAADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSE 62
           +G KSG  R + DPG Q E  Q  S     Q  S   +        P+      Q V S 
Sbjct: 137 EGCKSGMSRVSVDPGLQAEGCQGGSTPFFLQEPSFVGSVHALRPFNPS------QTVPSR 190

Query: 63  FEDVDS-GHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSR---------HP-QWFAG 111
              VDS G+ SG  S    ++ S    AS  A  ++    LS          HP  W   
Sbjct: 191 NAGVDSSGNHSGVSSHVHQVFKSSIPPASFPAGDVSDPESLSHGIIVSKHDTHPFNW--- 247

Query: 112 SKINHGSGSSMWPQIDNSSRNATSVL----DQHGHQNFYVGQPSGADFITHKLTDARLAS 167
             +  G   + W    + +    S      D +G Q   + Q +  D ITHK TDAR  S
Sbjct: 248 --VVKGIKGTHWNPWKDVALELPSFPFGSSDLYG-QEIVIIQSATIDPITHKPTDARFDS 304

Query: 168 DSTIANIGTCGERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVS 227
              + N+      LITD  V AV   SQ + Q+    N NL                   
Sbjct: 305 GGLVENMVNSESGLITDSKVPAVKPVSQRSVQIGKTTNDNL------------------- 345

Query: 228 QAGIKPKEELGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLS 287
                  E LGEL+KLDSFGRWMD+EIG DC+DSLM  DSGNYW  LDA ND+KE SSLS
Sbjct: 346 -----DLEGLGELRKLDSFGRWMDKEIGRDCNDSLMTLDSGNYWCGLDAGNDEKEGSSLS 400

Query: 288 HHMQLEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF 347
           HHMQL+++SLGPSLSQEQLFSI DFSPDW YSG  TKVLI+G FLG+ KL  +T+WGCMF
Sbjct: 401 HHMQLDVNSLGPSLSQEQLFSIFDFSPDWTYSGNVTKVLIVGSFLGSNKLPVETQWGCMF 460

Query: 348 GEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVA 406
           GE+EV AEVLT+NV+RC+ P  HA GR+PFY+T  NRLACSEVREFEY EKPS    P A
Sbjct: 461 GEVEVSAEVLTNNVLRCRTPPLHAPGRIPFYVTCCNRLACSEVREFEYLEKPSTLSLPNA 520

Query: 407 SKIAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDE 466
            K APEDE+  Q RL + L L  E    +C+I  C KC++   I S R D  K W   + 
Sbjct: 521 PKCAPEDELWFQMRLIRLLNLGSEENLLNCSINKCEKCQIIGLINSSRSDVAK-WSMPEG 579

Query: 467 SPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYE 526
           S   ++ D  N RD +IQ+LL ++LC+WL +K+H+G  G +V+DD G G++HLAAALGY 
Sbjct: 580 S---LKSDGMNHRDYMIQSLLEDKLCKWLAYKVHDGTMGTHVLDDEGLGIIHLAAALGYA 636

Query: 527 WAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQ 586
            A+  IIA+G+SPNFRD+ GRTALHWASYFGREETV  LV LG +PGAV+DPT  FP GQ
Sbjct: 637 RAIGLIIASGLSPNFRDSNGRTALHWASYFGREETVTTLVSLGVSPGAVDDPTSGFPRGQ 696

Query: 587 TAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQS 646
           TAADLASSRGHKGIAGYLAEADL++H  +LT  EN  DN+      ++A E A    V S
Sbjct: 697 TAADLASSRGHKGIAGYLAEADLTAHSCTLTDGENFKDNIKENANIDEAIEPADV--VPS 754

Query: 647 DGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDD-VSEVSVDLVALG 705
                E LSL+GSLAAVRKS +AAALI  AFR RSFRH+Q +++    + E S DLVALG
Sbjct: 755 QLAEDELLSLKGSLAAVRKSVNAAALIHAAFRARSFRHKQLMENDKGMIHEGSPDLVALG 814

Query: 706 SLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKK 765
            LNK  K IH+EDYLH AA++IQQ YRGWKGR++FLKIRN IVK+QAHVRG+QVRKQY+K
Sbjct: 815 ILNKAEK-IHYEDYLHVAALRIQQNYRGWKGRREFLKIRNRIVKIQAHVRGYQVRKQYRK 873

Query: 766 VVWSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASEN---EKTDEYEFLRIGRKQKFAG 822
           V+WSVSIVEKAILRWRR+  GLRGF+    T  V + +   EK+DEYEFLRIGR+ K+A 
Sbjct: 874 VIWSVSIVEKAILRWRRKRVGLRGFKAAGVTGEVVTPHPKMEKSDEYEFLRIGRQLKYAD 933

Query: 823 VEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQ 865
           VEKAL RVKSM R+PEAR QYMR+VA F  FK+ D+ +   SQ
Sbjct: 934 VEKALSRVKSMARSPEARRQYMRLVANFNKFKINDEETSGSSQ 976

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|365927834|gb|AEX07777.1| calmodulin-binding transcription factor SR4 [Solanum lycopersicum]

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/864 (50%), Positives = 555/864 (64%), Gaps = 70/864 (8%)

Query: 5   QGYKSGRS---AADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSS 61
           +GY+ G S      PG  +E+  +SS           PA Q SH S P+ +D   QA+SS
Sbjct: 127 EGYRLGASRLQPVHPGLLLENPDSSSKPCFV----FGPAFQKSHTSNPSLVDLKEQALSS 182

Query: 62  EFEDVDSGHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGSKINHGSGSS 121
           E    DS                             GL   SR  + F   ++N    + 
Sbjct: 183 ELHSGDS----------------------------KGLVAFSRSKERF---QLNPQVRAF 211

Query: 122 MWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERL 181
           M        RN   +L     + FY G  + AD  + KLT A+L +   +AN  +   RL
Sbjct: 212 MSSGFRKFERNLNVML----QRKFYSGHYNLADLRSSKLTYAKLYAGKAVANNRS---RL 264

Query: 182 ITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCP------VPEVTVASVSQAGIKPKE 235
                  A+T+        + E N ++   Q QN         P+  V + S  G    +
Sbjct: 265 -------AITSGK------VFEENIHVAPPQIQNISSSQTVVTPDAAVKTSSLDGGLNSD 311

Query: 236 ELGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMD 295
           E+G LKKLD  G+WMD+E  G  + SLM+SDSGNYWNTLD +N DKEVS+LS H+ LE +
Sbjct: 312 EVGSLKKLDILGKWMDREFAGG-NKSLMSSDSGNYWNTLDTDNGDKEVSTLSRHLLLEAN 370

Query: 296 SLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAE 355
           S+G S SQ+QLF I DFSP WA+SG ETKVLI+G FL  +K  +  KW CMFGE+EV AE
Sbjct: 371 SVGTSPSQKQLFRIFDFSPQWAFSGVETKVLIVGTFLVHRKYLTCLKWSCMFGEVEVSAE 430

Query: 356 VLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEV 415
           V T + IRCQ P HA G VPFY+T  NRLACSEVREFEYREK S+    +A  + P DEV
Sbjct: 431 VQTQS-IRCQVPFHAPGHVPFYVTCGNRLACSEVREFEYREKSSE----LALALRPSDEV 485

Query: 416 RLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDC 475
            LQ +L K LY    +K+ DC+  +C  CKLK  + S++  +     R+++    IE D 
Sbjct: 486 HLQVQLVKLLYSGLNKKFLDCSSRECENCKLKTQLCSLKCQTGNATERLEDLLAVIECDH 545

Query: 476 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT 535
            N +D  IQN ++++L EWLV + HE  KGPN+++D G+GV+HL AALGYEW + P+IA 
Sbjct: 546 INFKDVQIQNFMKDKLYEWLVSRAHEEDKGPNILNDQGKGVIHLVAALGYEWGLLPLIAA 605

Query: 536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595
           G+SPNFRDA GRTALHWA+++GRE+ VI L+KLG A GAV+DPT A PGG+TAADLASSR
Sbjct: 606 GISPNFRDACGRTALHWAAHYGREDMVIALIKLGVAAGAVDDPTTASPGGRTAADLASSR 665

Query: 596 GHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLS 655
           G+KGIAGYLAE+DL+SH   L  ++N +D + A L AEK  E+A Q  V  +G   + +S
Sbjct: 666 GYKGIAGYLAESDLTSHHQLLATSKNALDTIGAGLEAEKVYESAVQEIVPLNGTIDDDVS 725

Query: 656 LRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIH 715
           L+ SLA++RKSAHAAALIQ AFR RSFR RQ  +S +DVSE S+DLVALGSLNKV K+  
Sbjct: 726 LKASLASLRKSAHAAALIQAAFRARSFRQRQLRESRNDVSEASLDLVALGSLNKVQKVNC 785

Query: 716 FEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEK 775
           FEDYLH AAI IQQKY GWKGR++FLK+ N IVK+QA VRGH+VRKQYKK VW+VSI+EK
Sbjct: 786 FEDYLHSAAINIQQKYCGWKGRREFLKVHNQIVKMQALVRGHEVRKQYKKFVWAVSILEK 845

Query: 776 AILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVR 835
            ILRWRR+ +GLRGF    ++     E EK +EY++L IG KQK AGVEKAL RV+SMVR
Sbjct: 846 GILRWRRKKTGLRGFWPEKTSETGIVEREKEEEYDYLSIGLKQKCAGVEKALGRVESMVR 905

Query: 836 NPEARDQYMRMVAKFENFKMCDDG 859
           +PEARDQYMRMVAKF++ K+ D G
Sbjct: 906 HPEARDQYMRMVAKFKSCKLDDGG 929

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460391|ref|XP_004147929.1| PREDICTED: calmodulin-binding transcription activator 3-like [Cucumis sativus]

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/869 (51%), Positives = 531/869 (61%), Gaps = 136/869 (15%)

Query: 5   QGYKSG--RSAADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSE 62
           +G K G  R + DPG Q E  Q  S     Q  S   +        P+      Q V S 
Sbjct: 137 EGCKPGMSRVSVDPGLQAEGCQGGSTPFFLQEPSFVGSVHALRPFNPS------QTVPSR 190

Query: 63  FEDVDS-GHGSGTPSVAQSIYGSMSQNASLVAASIAGLPELSRHPQWFAGSKINHGSGSS 121
              VDS G+ SG  S    ++ S    AS  A  +                     SGSS
Sbjct: 191 NAGVDSSGNHSGVSSHVHQVFKSSISPASFPAGDV---------------------SGSS 229

Query: 122 MWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERL 181
                           D +G Q   + Q +  D ITHK TDAR  S   + N+      L
Sbjct: 230 ----------------DLYG-QEIVIIQSATIDPITHKATDARFDSGGLVENMVNSESGL 272

Query: 182 ITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQAGIKPKEELGELK 241
           ITD  V AV   SQ + Q+    N NL                          E LGEL+
Sbjct: 273 ITDSKVPAVKPVSQRSVQIGKTTNDNL------------------------DLEGLGELR 308

Query: 242 KLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSL 301
           KLDSFGRWMD+EIG DC+DSLM  DSGNYW  LDA ND+KE SSLSHHMQL+++SLGPSL
Sbjct: 309 KLDSFGRWMDKEIGRDCNDSLMTLDSGNYWCGLDAGNDEKEGSSLSHHMQLDVNSLGPSL 368

Query: 302 SQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNV 361
           SQEQLFSI DFSPDW YSG  TKVLI+G FLG+ KL  +T+WGCMFGE+EVPAEVLT+NV
Sbjct: 369 SQEQLFSIFDFSPDWTYSGNVTKVLIVGSFLGSNKLPVETQWGCMFGEVEVPAEVLTNNV 428

Query: 362 IRCQAPS-HAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQTR 420
           +RC+ P  HA GR+PFY+T  NRLACSEVREFEY EKPS    P A K APEDE+     
Sbjct: 429 LRCRTPPLHAPGRIPFYVTCCNRLACSEVREFEYLEKPSTLSLPNAPKCAPEDEL----- 483

Query: 421 LAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRD 480
                       WF                  MR                        RD
Sbjct: 484 ------------WF-----------------QMR-----------------------HRD 491

Query: 481 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN 540
            +IQ+LL ++LC+WL  K+H+G  G +V+DD G G++HLAAALGY  A+  IIA+G+SPN
Sbjct: 492 YMIQSLLEDKLCKWLACKVHDGTMGTHVLDDEGLGIIHLAAALGYARAIGLIIASGLSPN 551

Query: 541 FRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGI 600
           FRD+ GRTALHWASYFGREETV  LV LG +PGAV+DPT  FP GQTAADLASSRGHKGI
Sbjct: 552 FRDSNGRTALHWASYFGREETVTTLVSLGVSPGAVDDPTSGFPRGQTAADLASSRGHKGI 611

Query: 601 AGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRGSL 660
           AGYLAEADL++H  +LT  EN  DN+      ++A E A    V S     E LSL+GSL
Sbjct: 612 AGYLAEADLTAHSCTLTDGENFKDNIKENANVDEAIEPADV--VPSQLAEDELLSLKGSL 669

Query: 661 AAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDD-VSEVSVDLVALGSLNKVSKMIHFEDY 719
           AAVRKS +AAALI  AFR RSFRH+Q +++    + E S DLVALG LNK  K IH+EDY
Sbjct: 670 AAVRKSVNAAALIHAAFRARSFRHKQLMENDKGMIHEGSPDLVALGILNKAEK-IHYEDY 728

Query: 720 LHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILR 779
           LH AA++IQQ YRGWKGR++FLKIRN IVK+QAHVRG+QVRKQY+KV+WSVSIVEKAILR
Sbjct: 729 LHVAALRIQQNYRGWKGRREFLKIRNRIVKIQAHVRGYQVRKQYRKVIWSVSIVEKAILR 788

Query: 780 WRRRGSGLRGFRVGNSTANVASEN---EKTDEYEFLRIGRKQKFAGVEKALERVKSMVRN 836
           WRR+  GLRGF+    T  V + +   EK+DEYEFLRIGR+ K+A VEKAL RVKSM R+
Sbjct: 789 WRRKRVGLRGFKAAGVTGEVVAPHPNMEKSDEYEFLRIGRRLKYADVEKALSRVKSMARS 848

Query: 837 PEARDQYMRMVAKFENFKMCDDGSGLLSQ 865
           PEAR QYMR+VA F  F++ D+ +   SQ
Sbjct: 849 PEARRQYMRLVANFNKFEINDEETSGSSQ 877

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083672|ref|XP_002307083.1| predicted protein [Populus trichocarpa] gi|222856532|gb|EEE94079.1| predicted protein [Populus trichocarpa]

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 310/631 (49%), Positives = 412/631 (65%), Gaps = 53/631 (8%)

Query: 240 LKKLDSFGRWMDQEIGGDCDDSLMASDSGNYW------NTLDAENDDKEVSSLSHHMQLE 293
           LKKLDSF RWM +E+  D D   + S SG YW      N +DA+N          H  L+
Sbjct: 381 LKKLDSFTRWMSKELE-DVDQPHLQSSSGTYWISAESENVVDADNPS--------HGHLD 431

Query: 294 MDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVP 353
             +LGPSLSQ+QLFSI DFSP+WAY+G E K+L++G FL +++ + + KW  MFGE+EVP
Sbjct: 432 TYTLGPSLSQDQLFSIIDFSPNWAYAGTEIKILVMGRFLKSREEAENFKWSIMFGEVEVP 491

Query: 354 AEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPED 413
           AE + D ++RC  PSH AGRVPFY+T SNR+ACSEVREFEYR    +        IA ED
Sbjct: 492 AETIADGILRCTTPSHKAGRVPFYVTCSNRVACSEVREFEYRLSHVQDITYNYINIATED 551

Query: 414 EVRLQTRLAKFLYLD---PERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMA 470
              L  RLAK L L    P +  +D +  D    +L N I S+  +  + W ++ +   +
Sbjct: 552 ---LHMRLAKLLSLSSAFPSK--YDSSDVD-EISQLSNKISSLLKEGNETWDQMLKL-TS 604

Query: 471 IEG-DCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAM 529
           +EG      +D+L+Q  L+ +L EWL+ K+ EGGKGP+V+D+GGQGV+H AAALGYEWA+
Sbjct: 605 LEGFSSEKLKDQLLQKALKEQLHEWLLQKVAEGGKGPSVLDEGGQGVLHFAAALGYEWAL 664

Query: 530 RPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAA 589
            P I  GVS NFRD  G TALHWA+ +GRE TV  L+ LGAAPGA+ DPTP +P G+T A
Sbjct: 665 EPTIVAGVSVNFRDVNGWTALHWAASYGRERTVASLIHLGAAPGALTDPTPKYPTGRTPA 724

Query: 590 DLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMD-----NVAAALAAEKANETAAQIGV 644
           DLAS+ GHKGI+G+LAE+ LS+HLSSL + +   D      + A+L     NET  +   
Sbjct: 725 DLASANGHKGISGFLAESALSAHLSSLNLEKQDGDAAESSGIPASLTVSDCNETPVK--- 781

Query: 645 QSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDD----VSEVSVD 700
            +D P    LSL+ SLAAV  +  AAA I Q FRV+SF+ +Q  +  DD      E ++ 
Sbjct: 782 DADIPIG--LSLKDSLAAVCNATQAAARIHQVFRVQSFQKKQLKEYGDDKFGMSHERALS 839

Query: 701 LVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVR 760
           L+A+    K  K   +++ +H AAI+IQ K+RGWKGRK+FL IR  IVK+QAHVRGHQVR
Sbjct: 840 LIAV----KSQKAGQYDEPVH-AAIRIQNKFRGWKGRKEFLIIRQRIVKIQAHVRGHQVR 894

Query: 761 KQYKKVVWSVSIVEKAILRWRRRGSGLRGFRV-----GNSTANVASENEKTDEYEFLRIG 815
           K Y+K++WSV I++K ILRWRR+GSGLRGF+      G+S   V++   K D+ +FL+ G
Sbjct: 895 KNYRKIIWSVGILDKIILRWRRKGSGLRGFKSEALTEGSSMQVVST---KDDDDDFLKEG 951

Query: 816 RKQKFAGVEKALERVKSMVRNPEARDQYMRM 846
           RKQ     + AL RVKSM ++PEAR+QY R+
Sbjct: 952 RKQTEERSQIALARVKSMHQHPEAREQYHRL 982

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357113656|ref|XP_003558617.1| PREDICTED: calmodulin-binding transcription activator 1-like [Brachypodium distachyon]

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 307/632 (48%), Positives = 409/632 (64%), Gaps = 48/632 (7%)

Query: 240 LKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGP 299
            KK DSF RWM +E+  D DDS +   S  YWN+ DA+N    +   S H QL+  +LGP
Sbjct: 383 FKKSDSFTRWMTKELA-DVDDSQIKP-SSEYWNSEDADN----IIGASSHDQLDQFTLGP 436

Query: 300 SLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTD 359
            L+Q+QLFSI DFSP WAY+GA+T++L+ G FL   ++    KW CMFGEIEVPAE+L D
Sbjct: 437 MLAQDQLFSIIDFSPSWAYAGAKTRILVTGKFLKPDEVIR-FKWSCMFGEIEVPAEILAD 495

Query: 360 NVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKI-APEDEVRLQ 418
             + C +PS   GRVPFY+T SNRLACSEVREFEYR  PS + Y  A  +    ++  LQ
Sbjct: 496 GTLGCYSPSQKTGRVPFYVTCSNRLACSEVREFEYR--PSNSQYMDAPSLHGARNKTYLQ 553

Query: 419 TRLAKFLYLDPERKWFDCTIEDCNKCKLK-NTIYSMRGDSEKDWGRVDESPMAIEGD--- 474
            RL K L L P+   F  T+ +  K  +  N   ++   +   W  +    + + GD   
Sbjct: 554 MRLDKLLSLGPDE--FHATLSNNTKELIDLNRKINLLMKNNDSWSEL----LKLAGDNEL 607

Query: 475 -CPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPII 533
              + +D+ ++N +R++L  WL+ K  +GGKGP V+D  GQGV+HLAAALGY+WA+RP I
Sbjct: 608 VIEDKQDQFLENCIRDKLHIWLLHKAGDGGKGPGVLDKEGQGVLHLAAALGYDWAIRPTI 667

Query: 534 ATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS 593
             GV+ NFRDARG TALHWA++ GRE TV+ L+ LGAAPGA+ DP+P FP G T ADLAS
Sbjct: 668 TAGVNINFRDARGWTALHWAAFCGRERTVVALIALGAAPGALTDPSPDFPSGSTPADLAS 727

Query: 594 SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA--------AEKANETAAQIGVQ 645
           S GHKGI+GYLAE+ L+ HL +L + E  M + A+ ++        +E++    A+ G+Q
Sbjct: 728 SNGHKGISGYLAESSLTCHLQTLNLKE-AMGSNASEISGLPGIGDVSERSVSPLAREGLQ 786

Query: 646 SDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALG 705
           +        S+  SL AVR +A AAA I Q FRV+SF+ +Q++Q  DD   +S D  AL 
Sbjct: 787 TG-------SMGDSLGAVRNAAQAAARIYQVFRVQSFQRKQAVQYEDDSGVIS-DERALS 838

Query: 706 SLN-KVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYK 764
            L+ K SK   F D  H AA +IQ K+RGWKGRK+FL +R  +V++QAHVRGHQVRK Y+
Sbjct: 839 LLSYKTSKPGQF-DPKHAAATRIQNKFRGWKGRKEFLLLRRRVVQIQAHVRGHQVRKHYR 897

Query: 765 KVVWSVSIVEKAILRWRRRGSGLRGFR--------VGNSTANVASENEKTDEYEFLRIGR 816
           K++WSV IVEK ILRWRRRG+GLRGFR          +S  +V       D+Y FL+ GR
Sbjct: 898 KIIWSVGIVEKVILRWRRRGAGLRGFRSTEGAPDSTSSSAVDVIPNKPGEDDYSFLQEGR 957

Query: 817 KQKFAGVEKALERVKSMVRNPEARDQYMRMVA 848
           KQ    +++AL RVKSMV+ P+ARDQY R++ 
Sbjct: 958 KQTEERLQRALARVKSMVQYPDARDQYQRILT 989

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|108706603|gb|ABF94398.1| anther ethylene-upregulated protein ER1, putative, expressed [Oryza sativa Japonica Group]

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 299/626 (47%), Positives = 413/626 (65%), Gaps = 40/626 (6%)

Query: 240 LKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGP 299
            KK DSF RWM +E+  + DDS + S SG YWN+ +A+N  +  SS  +       +LGP
Sbjct: 382 FKKNDSFTRWMSKELA-EVDDSQITSSSGVYWNSEEADNIIEASSSDQY-------TLGP 433

Query: 300 SLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTD 359
            L+Q+QLF+I DFSP W Y+G++T+V I G FL + ++    KW CMFGE EVPAE++ D
Sbjct: 434 VLAQDQLFTIVDFSPTWTYAGSKTRVFIKGNFLSSDEVKR-LKWSCMFGEFEVPAEIIAD 492

Query: 360 NVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQT 419
           + + C +PSH  GRVPFY+T SNRLACSEVREF++R +   A  P+ S     +++ LQ 
Sbjct: 493 DTLVCHSPSHKPGRVPFYVTCSNRLACSEVREFDFRPQYMDAPSPLGST----NKIYLQK 548

Query: 420 RLAKFLYLDPERKWFDCTIEDCNK--CKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPN 477
           RL K L +  E+     T+ +  K    L   I S+  +++ DW  + +     E    +
Sbjct: 549 RLDKLLSV--EQDEIQTTLSNPTKEIIDLSKKISSLMMNND-DWSELLKLADDNEPATDD 605

Query: 478 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGV 537
            +D+ +QN ++ +L  WL+ K+ +GGKGP+++D+ GQGV+HLAAALGY+WA+RP IA GV
Sbjct: 606 KQDQFLQNRIKEKLHIWLLHKVGDGGKGPSMLDEEGQGVLHLAAALGYDWAIRPTIAAGV 665

Query: 538 SPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGH 597
           + NFRDA G TALHWA++ GRE TV+ L+ LGAAPGAV DPTP+FP G T ADLAS+ GH
Sbjct: 666 NINFRDAHGWTALHWAAFCGRERTVVALIALGAAPGAVTDPTPSFPSGSTPADLASANGH 725

Query: 598 KGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA-----AEKANETAAQIGVQSDGPAAE 652
           KGI+G+LAE+ L+SHL +L + E  M + A  ++        A+ +A+ + V+      +
Sbjct: 726 KGISGFLAESSLTSHLQTLNLKE-AMRSSAGEISGLPGIVNVADRSASPLAVE----GHQ 780

Query: 653 QLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLN-KVS 711
             S+  SL AVR +A AAA I Q FR++SF+ +Q++Q  D+   +S D  A+  L+ K S
Sbjct: 781 TGSMGDSLGAVRNAAQAAARIYQVFRMQSFQRKQAVQYEDENGAIS-DERAMSLLSAKPS 839

Query: 712 KMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVS 771
           K     D LH AA +IQ K+RGWKGRK+FL IR  IVK+QAHVRGHQVRK Y+K++WSV 
Sbjct: 840 KPAQL-DPLHAAATRIQNKFRGWKGRKEFLLIRQRIVKIQAHVRGHQVRKHYRKIIWSVG 898

Query: 772 IVEKAILRWRRRGSGLRGFR---------VGNSTANVASENEKTDEYEFLRIGRKQKFAG 822
           IVEK ILRWRRRG+GLRGFR           +S+ NV       ++Y+FL+ GRKQ    
Sbjct: 899 IVEKVILRWRRRGAGLRGFRPTENAVTESTSSSSGNVTQNRPAENDYDFLQEGRKQTEER 958

Query: 823 VEKALERVKSMVRNPEARDQYMRMVA 848
           ++KAL RVKSMV+ P+ARDQY R++ 
Sbjct: 959 LQKALARVKSMVQYPDARDQYQRILT 984

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	885
TAIR|locus:2173368	1050	AT5G64220 [Arabidopsis thalian	0.690	0.581	0.401	1.7e-114
TAIR|locus:2019534	1016	AT1G67310 [Arabidopsis thalian	0.615	0.536	0.376	7.5e-89
TAIR|locus:2060405	1032	SR1 "signal responsive 1" [Ara	0.805	0.690	0.316	1.7e-88
TAIR|locus:2130125	923	AT4G16150 [Arabidopsis thalian	0.667	0.640	0.313	3.3e-71
UNIPROTKB|Q9Y6Y1	1673	CAMTA1 "Calmodulin-binding tra	0.317	0.167	0.254	4.8e-11
UNIPROTKB|F1MNR3	1463	CAMTA1 "Uncharacterized protei	0.317	0.192	0.254	7e-11
UNIPROTKB|F1PDB7	1571	CAMTA1 "Uncharacterized protei	0.317	0.178	0.251	1.5e-10
UNIPROTKB|F1PDC5	1596	CAMTA1 "Uncharacterized protei	0.317	0.176	0.251	2.6e-10
UNIPROTKB|O94983	1202	CAMTA2 "Calmodulin-binding tra	0.103	0.076	0.353	6.9e-10
UNIPROTKB|I3L3W6	1207	CAMTA2 "Calmodulin-binding tra	0.103	0.076	0.353	7e-10

TAIR|locus:2173368 AT5G64220 [Arabidopsis thaliana (taxid:3702)]

 Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
 Identities = 260/648 (40%), Positives = 371/648 (57%)

Query:   244 DSFGRWMDQEIGGDCDDSLMASDSGNY-WNTLDAENDDKEVSSLSHHMQLEMDSLGPSLS 302
             DSF RW+ +E+G + +D  M S SG   W +++ EN     ++ S        SL PSLS
Sbjct:   409 DSFSRWVSKELG-EMEDLQMQSSSGGIAWTSVECEN----AAAGS--------SLSPSLS 455

Query:   303 QEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVI 362
             ++Q F++ DF P W  + +E +V++IG FL + +  +   W CMFGE+EVPA++L D V+
Sbjct:   456 EDQRFTMIDFWPKWTQTDSEVEVMVIGTFLLSPQEVTSYSWSCMFGEVEVPADILVDGVL 515

Query:   363 RCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKI--APEDEVRLQTR 420
              C AP H  GRVPFYIT S+R +CSEVREF++   P       A+ I  A   E  L  R
Sbjct:   516 CCHAPPHEVGRVPFYITCSDRFSCSEVREFDFL--PGSTRKLNATDIYGANTIETSLHLR 573

Query:   421 LAKFLYLD---PERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDW-GRVDESPMAIEGDCP 476
                 L L     E   F+   E   K    + I  ++ + E    G +++    +E    
Sbjct:   574 FENLLALRCSVQEHHIFENVGEKRRKI---SKIMLLKDEKEPPLPGTIEKDLTELE---- 626

Query:   477 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG 536
              ++++LI+    ++L  WL+ K+ E GKGPN++D+ GQGV+HLAAALGY+WA++PI+A G
Sbjct:   627 -AKERLIREEFEDKLYLWLIHKVTEEGKGPNILDEDGQGVLHLAAALGYDWAIKPILAAG 685

Query:   537 VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG 596
             VS NFRDA G +ALHWA++ GRE+TV +LV LGA  GA+ DP+P  P G+TAADLA   G
Sbjct:   686 VSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAGALADPSPEHPLGKTAADLAYGNG 745

Query:   597 HKGIAGYLAEADLSSHLSSLTVNENGMDNVXXXXXXXXXXXXXXQIGVQSDGPAAEQLSL 656
             H+GI+G+LAE+ L+S+L  LTV+     +                    S G   E LS+
Sbjct:   746 HRGISGFLAESSLTSYLEKLTVDAKENSSADSSGAKAVLTVAERTATPMSYGDVPETLSM 805

Query:   657 RGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQXXXXXXXXXXXXXALG-SLNKVSKMIH 715
             + SL AV  +  AA  + Q FR++SF+ +Q  +             A+  +  K  K  H
Sbjct:   806 KDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGGDNKFDISDELAVSFAAAKTKKSGH 865

Query:   716 FEDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEK 775
                 +H AA++IQ+KYRGWK RK+FL IR  IVK+QAHVRGHQVRKQY+ ++WSV ++EK
Sbjct:   866 SSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRAIIWSVGLLEK 925

Query:   776 AILX---XXXXXXXXXXXXXXNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKS 832
              IL                    T  V    ++ D+Y+FL+ GRKQ    ++KAL RVKS
Sbjct:   926 IILRWRRKGSGLRGFKRDTISKPTEPVCPAPQE-DDYDFLKEGRKQTEERLQKALTRVKS 984

Query:   833 MVRNPEARDQYMRMVAKFENFKM--CDDGSGLLSQGEDSLNGPTKDNL 878
             M + PEAR QY R++   E F+       S L +  E++ N   +D+L
Sbjct:   985 MAQYPEARAQYRRLLTVVEGFRENEASSSSALKNNTEEAANYNEEDDL 1032

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2019534 AT1G67310 [Arabidopsis thaliana (taxid:3702)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 218/579 (37%), Positives = 321/579 (55%)

Query:   302 SQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNV 361
             +  Q F+I+D SPDW Y+   TKV+IIG FL      +++ W CMFG  +VP E++ + V
Sbjct:   441 AHNQKFTIQDISPDWGYANETTKVIIIGSFLCDP---TESTWSCMFGNAQVPFEIIKEGV 497

Query:   362 IRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPS----KAGYPVASKIAPE-DEVR 416
             IRC+AP    G+V   IT  + L CSE+REFEYREKP     K   P  S ++   +E+ 
Sbjct:   498 IRCEAPQCGPGKVNLCITSGDGLLCSEIREFEYREKPDTCCPKCSEPQTSDMSTSPNELI 557

Query:   417 LQTRLAKFLYLD--PERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGD 474
             L  R  + L  D   ERK     +E  N  KL   +  ++ D ++ W  V  + +     
Sbjct:   558 LLVRFVQTLLSDRSSERK---SNLESGND-KL---LTKLKADDDQ-WRHVIGTIIDGSAS 609

Query:   475 CPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA 534
               ++ D L+Q LL+++L  WL  +  +       +    QG++H+ A LG+EWA  PI+A
Sbjct:   610 STSTVDWLLQELLKDKLDTWLSSRSCDEDYITCSLSKQEQGIIHMVAGLGFEWAFYPILA 669

Query:   535 TGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASS 594
              GV+ +FRD +G +ALHWA+ FG E+ V  L+  GA+ GAV DP+   P G+TAA +A+S
Sbjct:   670 HGVNVDFRDIKGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASIAAS 729

Query:   595 RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVXXXXXXXXXXXXXXQIGVQSDGPAAEQL 654
              GHKG+AGYL+E  L++HLSSLT+ E   +N                I  QS     +Q+
Sbjct:   730 NGHKGLAGYLSEVALTNHLSSLTLEET--EN-SKDTAQVQTEKTLNSISEQSPSGNEDQV 786

Query:   655 SLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQXXXXXXXXXXXXXA--LGSLNKVSK 712
             SL+ +LAAVR +A AAA IQ AFR  SFR R+  +                +  ++ +SK
Sbjct:   787 SLKDTLAAVRNAAQAAARIQAAFRAHSFRKRKQREAALVACLQEYGMYCEDIEGISAMSK 846

Query:   713 MIHFE--DYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSV 770
             +   +  +Y + AA+ IQ+ +RG+K RK FL++R  +VK+QAHVRG+Q+RK YK + W+V
Sbjct:   847 LTFGKGRNY-NSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWAV 905

Query:   771 SIVEKAILXXXXXXXXXXXXXXXNSTANVASENEKTDEYEFLRIGRKQKF-AGVEKALER 829
              I++K +L                   +V S  +  DE + L++ RKQK    V +A  R
Sbjct:   906 RILDKVVLRWRRKGVGLRGFRQ-----DVESTEDSEDE-DILKVFRKQKVDVAVNEAFSR 959

Query:   830 VKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGED 868
             V SM  +PEAR QY R++ ++   K  + G      GED
Sbjct:   960 VLSMSNSPEARQQYHRVLKRYCQTK-AELGKTETLVGED 997

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2060405 SR1 "signal responsive 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 865 (309.6 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
 Identities = 243/768 (31%), Positives = 366/768 (47%)

Query:     9 SGRSAADPGSQIESSQTSSARSLAQANSSAPAAQTSHASIPNKIDWNGQAVSSEFEDVDS 68
             + RS  + G  + S     A      N  +  +QT+ ++  N         S E ED +S
Sbjct:   153 AARSPQETGDALTSEHDGYASCSFNQNDHSNHSQTTDSASVNGFH------SPELEDAES 206

Query:    69 G---HGSGTPSVAQSIY-----GSMSQNASLVAASIAGLPELSRHPQWF--AGSKINHGS 118
                 HGS T    Q +      G+++        S+       +  +      S I    
Sbjct:   207 AYNQHGSSTAYSHQELQQPATGGNLTGFDPYYQISLTPRDSYQKELRTIPVTDSSIMVDK 266

Query:   119 GSSM-WPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFIT------HKLTDARLASDSTI 171
               ++  P + N  +N  S+ D    +       SG + +       H++ D  L S  T+
Sbjct:   267 SKTINSPGVTNGLKNRKSI-DSQTWEEILGNCGSGVEALPLQPNSEHEVLDQILESSFTM 325

Query:   172 ANIGTCGERLIT--DIDVHAVTTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQA 229
              +  +  E ++   + ++++  TS +       +   N I+N   N   P ++  ++ Q 
Sbjct:   326 QDFASLQESMVKSQNQELNSGLTSDRTVWFQGQDMELNAISNLASNEKAPYLS--TMKQH 383

Query:   230 GIKPXXXXXXXXXXDSFGRWMDQEIG-----GDCDDSLMASDSGNYWNTLDAENDDKEVS 284
              +            DSF RWM +E+G      D ++S   S S  YW  +++E+      
Sbjct:   384 LLHGALGEEGLKKMDSFNRWMSKELGDVGVIADANESFTQSSSRTYWEEVESED-----G 438

Query:   285 SLSHHMQLEMDS--LGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTK 342
             S  H+ + +MD   + PSLS+EQLFSI DFSP WAY G E  V + G FL T++ +   +
Sbjct:   439 SNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPSWAYVGCEVVVFVTGKFLKTREETEIGE 498

Query:   343 WGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAG 402
             W CMFG+ EVPA+V+++ +++C AP H AGRVPFY+T SNRLACSEVREFEY+   S+  
Sbjct:   499 WSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCSNRLACSEVREFEYKVAESQVF 558

Query:   403 YPVASKIAPEDEVRLQTRLAKFLYLDPERKW-FDCTIEDCNKCKLKNTIYSMRGDSEKDW 461
                A   +  D   L+ R  K L    E          D ++   K ++     D + D 
Sbjct:   559 DREADDESTIDI--LEARFVKLLCSKSENTSPVSGNDSDLSQLSEKISLLLFENDDQLDQ 616

Query:   462 GRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAA 521
               ++E    I  +  N ++ L+Q  L+  L  WL+ KI EGGKGP+V+D+GGQGV+H AA
Sbjct:   617 MLMNE----ISQE--NMKNNLLQEFLKESLHSWLLQKIAEGGKGPSVLDEGGQGVLHFAA 670

Query:   522 ALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPA 581
             +LGY WA+ P I  GVS +FRD  G TALHWA++FGRE  +  L+ LGAAPG + DP P 
Sbjct:   671 SLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRERIIGSLIALGAAPGTLTDPNPD 730

Query:   582 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVXXXXXXXXXXXXXXQ 641
             FP G T +DLA + GHKGIAGYL+E  L +H+S L++N+   + V               
Sbjct:   731 FPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLNDKNAETVEMAPSPSSSSLTDSL 790

Query:   642 IGVQSDGPAAEQLS--LRGSLAAVR--KSAHAAALIQQAFRVRSFRHRQSIQXXXXXXXX 697
               V++   AA ++    R      +  K      L     R  S    ++ +        
Sbjct:   791 TAVRNATQAAARIHQVFRAQSFQKKQLKEFGDKKLGMSEERALSMLAPKTHKSGRAHSDD 850

Query:   698 XXXXXALGSLNKVSKMIHFEDYL--HFAAIKIQQKYRGWKGRKDFLKI 743
                  A+   NK       +DYL      IKIQ   RG++ RK++ KI
Sbjct:   851 SVQAAAIRIQNKFRGYKGRKDYLITRQRIIKIQAHVRGYQFRKNYRKI 898

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0042742 "defense response to bacterium" evidence=IGI;IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IGI

TAIR|locus:2130125 AT4G16150 [Arabidopsis thaliana (taxid:3702)]

 Score = 693 (249.0 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
 Identities = 196/626 (31%), Positives = 292/626 (46%)

Query:   244 DSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSH-HMQLEMDSLGPSLS 302
             DSFGRW++  I     DS  + D  +         D     ++ H H  +      P   
Sbjct:   323 DSFGRWVNNFIS----DSPGSVDDPSLEAVYTPGQDSSTPPTVFHSHSDI------P--- 369

Query:   303 QEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVI 362
              EQ+F+I D SP WAYS  +TK+L+ G F  + +    +   C+ GE+ VPAE L   V 
Sbjct:   370 -EQVFNITDVSPAWAYSTEKTKILVTGFFHDSFQHLGRSNLICICGELRVPAEFLQMGVY 428

Query:   363 RCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPS-KAGYPVASKIAPEDEVRLQTRL 421
             RC  P  + G V  Y++       S++  FE+R     +   P   ++   +E   Q RL
Sbjct:   429 RCFLPPQSPGVVNLYLSVDGNKPISQLFSFEHRSVQFIEKAIPQDDQLYKWEEFEFQVRL 488

Query:   422 AKFLYLDPER-KWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRD 480
             A  L+    +       I   N  + K  + S        W  + +S  A E     +RD
Sbjct:   489 AHLLFTSSNKISVLTSKISPENLLEAKK-LASRTSHLLNSWAYLMKSIQANEVPFDQARD 547

Query:   481 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN 540
              L +  L+NRL EWL+ K+ E  +     D  G GV+HL A LGY W++       +S +
Sbjct:   548 HLFELTLKNRLKEWLLEKVIEN-RNTKEYDSKGLGVIHLCAVLGYTWSILLFSWANISLD 606

Query:   541 FRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGI 600
             FRD +G TALHWA+Y+GRE+ V  L+  GA P  V DPT  F GG TAADLA  +G+ G+
Sbjct:   607 FRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTKEFLGGCTAADLAQQKGYDGL 666

Query:   601 AGYLAEADLSSHLSSLTVNENGMDNVXXXXXXXXXXXXXXQIGVQSDGPA-AEQLSLRGS 659
             A +LAE  L +    +    N   N+                   + G A  E+ SL+ +
Sbjct:   667 AAFLAEKCLVAQFKDMQTAGNISGNLETIKAEKSS----------NPGNANEEEQSLKDT 716

Query:   660 LAAVRKSAHAAALIQQAFRVRSFRHRQSIQXXXXXXXXXXXXXALGSLNKVSKMIHFEDY 719
             LAA R +A AAA IQ AFR    + R S               A   +    +       
Sbjct:   717 LAAYRTAAEAAARIQGAFREHELKVRSSAVRFASKEEEAKNIIAAMKIQHAFRNFEVRRK 776

Query:   720 LHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILX 779
             +  AA +IQ +++ WK R++FL +R   +++QA  RG QVR+QY+K+ WSV ++EKAIL 
Sbjct:   777 IA-AAARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQYQKITWSVGVLEKAILR 835

Query:   780 XXXXXXXXXXXXXXNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEA 839
                                  SE  +    +F +  +KQ    +E+++ +V++M R+ +A
Sbjct:   836 WRLKRKGFRGLQVSQPDEKEGSEAVE----DFYKTSQKQAEERLERSVVKVQAMFRSKKA 891

Query:   840 RDQYMRMVAKFENFKMCDDGSGLLSQ 865
             +  Y RM    E  ++  DG   L Q
Sbjct:   892 QQDYRRMKLAHEEAQLEYDGMQELDQ 917

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

UNIPROTKB|Q9Y6Y1 CAMTA1 "Calmodulin-binding transcription activator 1" [Homo sapiens (taxid:9606)]

 Score = 182 (69.1 bits), Expect = 4.8e-11, Sum P(4) = 4.8e-11
 Identities = 83/326 (25%), Positives = 139/326 (42%)

Query:   296 SLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAE 355
             +LG      ++F + D+SP+W+Y     KVLI G +   ++ S++  + C+F +I VPA 
Sbjct:   860 TLGMLQQSGRVFMVTDYSPEWSYPEGGVKVLITGPW---QEASNN--YSCLFDQISVPAS 914

Query:   356 VLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASK--IAPED 413
             ++   V+RC  P+H  G V   +  +N++  + V  FEY+ +      P +    ++ +D
Sbjct:   915 LIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSV-VFEYKARALPT-LPSSQHDWLSLDD 972

Query:   414 EVRLQTRLAKFLYLDP-ERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDE--SPMA 470
                 Q R++    L+  ER+  + T    +K +      S  G    + G   +  S   
Sbjct:   973 N---QFRMSILERLEQMERRMAEMTGSQQHK-QASGGGSSGGGSGSGNGGSQAQCASGTG 1028

Query:   471 IEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDG---GQGVVHLAAALGY-- 525
               G C  SR  ++   + +R C W         K  ++I      G  ++HLAAA GY  
Sbjct:  1029 ALGSCFESRVVVVCEKMMSRAC-W--------AKSKHLIHSKTFRGMTLLHLAAAQGYAT 1079

Query:   526 ------EWAMRPI----IATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV 575
                   +W  +      +   V P   D    T L WA   G  E  ++L K      ++
Sbjct:  1080 LIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHLEAAVVLYKWDRRAISI 1139

Query:   576 EDPTPAFPGGQTAADLASSRGHKGIA 601
              D     P G     +A SRGH  +A
Sbjct:  1140 PDSLGRLPLG-----IARSRGHVKLA 1160

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1MNR3 CAMTA1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 177 (67.4 bits), Expect = 7.0e-11, Sum P(4) = 7.0e-11
 Identities = 83/326 (25%), Positives = 139/326 (42%)

Query:   296 SLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAE 355
             +LG      ++F + D+SP+W+Y     KVLI G +   ++ S++  + C+F +I VPA 
Sbjct:   642 TLGMLQQSGRVFMVTDYSPEWSYPEGGVKVLITGPW---QEASNN--YSCLFDQISVPAS 696

Query:   356 VLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASK--IAPED 413
             ++   V+RC  P+H  G V   +  +N++  + V  FEY+ +      P +    ++ +D
Sbjct:   697 LIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSV-VFEYKARALPT-LPSSQHDWLSLDD 754

Query:   414 EVRLQTRLAKFLYLDP-ERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDE--SPMA 470
                 Q R++    L+  ER+  + T    +K +      S  G    + G   +  S   
Sbjct:   755 N---QFRMSILERLEQMERRMAEMTGSQQHK-QGSGGGSSGGGTGSGNGGSQAQCASGPG 810

Query:   471 IEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDG---GQGVVHLAAALGY-- 525
               G C  SR  ++   + +R C W         K  ++I      G  ++HLAAA GY  
Sbjct:   811 TLGSCFESRVVVVCEKMMSRAC-W--------AKSKHLIHSKTFRGMTLLHLAAAQGYAT 861

Query:   526 ------EWAMRPI----IATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV 575
                   +W  +      +   V P   D    T L WA   G  E  ++L K      ++
Sbjct:   862 LIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHLEAAVVLYKWDRRAISI 921

Query:   576 EDPTPAFPGGQTAADLASSRGHKGIA 601
              D     P G     +A SRGH  +A
Sbjct:   922 PDSLGRLPLG-----IARSRGHVKLA 942

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1PDB7 CAMTA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 175 (66.7 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
 Identities = 82/326 (25%), Positives = 140/326 (42%)

Query:   296 SLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAE 355
             +LG      ++F + D+SP+W+Y     KVLI G +   ++ S++  + C+F +I VPA 
Sbjct:   754 TLGMLQQSGRVFMVTDYSPEWSYPEGGVKVLITGPW---QEASNN--YSCLFDQISVPAS 808

Query:   356 VLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASK--IAPED 413
             ++   V+RC  P+H  G V   +  +N++  + V  FEY+ +      P +    ++ +D
Sbjct:   809 LIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSV-VFEYKARALPT-LPSSQHDWLSLDD 866

Query:   414 EVRLQTRLAKFLYLDP-ERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDE--SPMA 470
                 Q R++    L+  ER+  + T    +K +      S  G+   + G   +  S   
Sbjct:   867 N---QFRMSILERLEQMERRMAEMTGSQQHK-QGSGGGSSGGGNGTGNGGSQAQCASGPG 922

Query:   471 IEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDG---GQGVVHLAAALGY-- 525
               G C  +R  ++   + +R C W         K  ++I      G  ++HLAAA GY  
Sbjct:   923 TLGSCFENRVVVVCEKMMSRAC-W--------AKSKHLIHSKTFRGMTLLHLAAAQGYAT 973

Query:   526 ------EWAMRPI----IATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV 575
                   +W  +      +   V P   D    T L WA   G  E  ++L K      ++
Sbjct:   974 LIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHLEAAVVLYKWDRRAISI 1033

Query:   576 EDPTPAFPGGQTAADLASSRGHKGIA 601
              D     P G     +A SRGH  +A
Sbjct:  1034 PDSLGRLPLG-----IARSRGHVKLA 1054

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1PDC5 CAMTA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 175 (66.7 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
 Identities = 82/326 (25%), Positives = 140/326 (42%)

Query:   296 SLGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAE 355
             +LG      ++F + D+SP+W+Y     KVLI G +   ++ S++  + C+F +I VPA 
Sbjct:   783 TLGMLQQSGRVFMVTDYSPEWSYPEGGVKVLITGPW---QEASNN--YSCLFDQISVPAS 837

Query:   356 VLTDNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASK--IAPED 413
             ++   V+RC  P+H  G V   +  +N++  + V  FEY+ +      P +    ++ +D
Sbjct:   838 LIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSV-VFEYKARALPT-LPSSQHDWLSLDD 895

Query:   414 EVRLQTRLAKFLYLDP-ERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDE--SPMA 470
                 Q R++    L+  ER+  + T    +K +      S  G+   + G   +  S   
Sbjct:   896 N---QFRMSILERLEQMERRMAEMTGSQQHK-QGSGGGSSGGGNGTGNGGSQAQCASGPG 951

Query:   471 IEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDG---GQGVVHLAAALGY-- 525
               G C  +R  ++   + +R C W         K  ++I      G  ++HLAAA GY  
Sbjct:   952 TLGSCFENRVVVVCEKMMSRAC-W--------AKSKHLIHSKTFRGMTLLHLAAAQGYAT 1002

Query:   526 ------EWAMRPI----IATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV 575
                   +W  +      +   V P   D    T L WA   G  E  ++L K      ++
Sbjct:  1003 LIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHLEAAVVLYKWDRRAISI 1062

Query:   576 EDPTPAFPGGQTAADLASSRGHKGIA 601
              D     P G     +A SRGH  +A
Sbjct:  1063 PDSLGRLPLG-----IARSRGHVKLA 1083

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|O94983 CAMTA2 "Calmodulin-binding transcription activator 2" [Homo sapiens (taxid:9606)]

 Score = 143 (55.4 bits), Expect = 6.9e-10, Sum P(4) = 6.9e-10
 Identities = 35/99 (35%), Positives = 49/99 (49%)

Query:   299 PSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLT 358
             P LS   L +I DFSP+W+Y     KVLI G +    +      + C+F  I VPA ++ 
Sbjct:   526 PQLSPA-LSTITDFSPEWSYPEGGVKVLITGPWTEAAE-----HYSCVFDHIAVPASLVQ 579

Query:   359 DNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREK 397
               V+RC  P+H  G V   + G      + V  FEYR +
Sbjct:   580 PGVLRCYCPAHEVGLVSLQVAGREGPLSASVL-FEYRAR 617

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003682 "chromatin binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0008134 "transcription factor binding" evidence=IGI

GO:0014898 "cardiac muscle hypertrophy in response to stress" evidence=IDA

GO:0042826 "histone deacetylase binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|I3L3W6 CAMTA2 "Calmodulin-binding transcription activator 2" [Homo sapiens (taxid:9606)]

 Score = 143 (55.4 bits), Expect = 7.0e-10, Sum P(4) = 7.0e-10
 Identities = 35/99 (35%), Positives = 49/99 (49%)

Query:   299 PSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLT 358
             P LS   L +I DFSP+W+Y     KVLI G +    +      + C+F  I VPA ++ 
Sbjct:   531 PQLSPA-LSTITDFSPEWSYPEGGVKVLITGPWTEAAE-----HYSCVFDHIAVPASLVQ 584

Query:   359 DNVIRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREK 397
               V+RC  P+H  G V   + G      + V  FEYR +
Sbjct:   585 PGVLRCYCPAHEVGLVSLQVAGREGPLSASVL-FEYRAR 622

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	885
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	9e-15
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-11
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-09
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-08
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-08
pfam01833	84	pfam01833, TIG, IPT/TIG domain	4e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-06
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-05
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	5e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	5e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	6e-04
cd00102	89	cd00102, IPT, Immunoglobulin-like fold, Plexins, T	0.002
pfam00612	21	pfam00612, IQ, IQ calmodulin-binding motif	0.003
smart00248	30	smart00248, ANK, ankyrin repeats	0.004

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 71.3 bits (175), Expect = 9e-15
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 6/104 (5%)

Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           E G   N  D+ G+  +HLAA  G+   ++ ++  G   N RD  G T LH A+  G  +
Sbjct: 28  ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLD 87

Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            V +L+K GA   A +        G+T   LA+  GH  +   L
Sbjct: 88  VVKLLLKHGADVNARDK------DGRTPLHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 10/117 (8%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D+ G+  +HLAA+ G+   ++ ++  G   N +D  GRT LH A+  G  E V +L+
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGM 623
           + GA   A +        G T   LA+  G+  +   L    L         +++G 
Sbjct: 61  EKGADVNARDK------DGNTPLHLAARNGNLDVVKLL----LKHGADVNARDKDGR 107

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS 554
           LV  + E G   N+ D      +HLAA  G    ++ ++  G   N +D  G TALH A+
Sbjct: 12  LVKLLLEKGADVNLGDTDT--ALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAA 69

Query: 555 YFGREETVIMLVKLGA 570
             G  E V +L++ GA
Sbjct: 70  RNGNLEIVKLLLEHGA 85

Length = 91

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 57.3 bits (139), Expect = 2e-08
 Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 19/136 (13%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWA--MRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           G  P   D  G   +H  A         + P++  G+S N R+  G+T LH+A+ F    
Sbjct: 212 GCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPR 271

Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTV-- 618
               L+ LGA      D       G T   L     +    G    A L+ + S+ TV  
Sbjct: 272 ACRRLIALGA------DINAVSSDGNTPLSLMVRNNN----GRAVRAALAKNPSAETVAA 321

Query: 619 -----NENGMDNVAAA 629
                +  G D  + A
Sbjct: 322 TLNTASVAGGDIPSDA 337

Length = 471

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 8/91 (8%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           HLAA  G    ++ ++  G   N  D    TALH A+  G  E V +L++ GA      D
Sbjct: 2   HLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGA------D 53

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYLAEAD 608
                  G TA  LA+  G+  I   L E  
Sbjct: 54  VNAKDKDGNTALHLAARNGNLEIVKLLLEHG 84

Length = 91

>gnl|CDD|216730 pfam01833, TIG, IPT/TIG domain

 Score = 48.2 bits (115), Expect = 4e-07
 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 6/88 (6%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEV-LTDNVIRCQA 366
            I   SP    +   T + I G   GT   S DTK    FG  E    V ++   I C  
Sbjct: 2   VITSISPATGPASGGTTITITGSNFGTD--SEDTK--VTFGGTECTVIVSVSSTQIVCTT 57

Query: 367 PSHAAGRVPFYITGSNRLACSEVREFEY 394
           P+ AAG V   +T +  L+ S V  F Y
Sbjct: 58  PAGAAGTVSVSVTVNGGLSSSPVT-FTY 84

This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognise a significant number of members. Length = 84

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 516 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
            +H AA  G    ++ ++  GV  N  D  G TALH A+  G  E + +L+
Sbjct: 4   ALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 23/64 (35%), Positives = 31/64 (48%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G   N  D  G   +HLAA  G    ++ ++  G   N RD  GRT LH A+  G  E V
Sbjct: 63  GADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVV 122

Query: 563 IMLV 566
            +L+
Sbjct: 123 KLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 47.5 bits (112), Expect = 1e-05
 Identities = 41/139 (29%), Positives = 53/139 (38%), Gaps = 16/139 (11%)

Query: 496 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPII--------ATGVSPNFRDARGR 547
           V  +   G   N  D  G   +HLAA  G        +        A     N RD  G 
Sbjct: 89  VKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGN 148

Query: 548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
           T LHWA+  G  + V +L++ GA P +          G TA D A+  G   +   L   
Sbjct: 149 TPLHWAALNGDADIVELLLEAGADPNSRNSY------GVTALDPAAKNGRIELVKLL--L 200

Query: 608 DLSSHLSSLTVNENGMDNV 626
           D   HLS L  N  G+ N 
Sbjct: 201 DKGLHLSLLKFNLEGVANA 219

Length = 235

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           GRTALH A+  GR E V  L++ G      ++       G TA  +A+  G+  +   L
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDE------DGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAV 575
           G T LH A+  G  E V +L++ GA   A 
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNAR 31

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 537 VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA 592
           +  N  D  G T LH A+ +G  E V  L+K G      +        G TA DLA
Sbjct: 7   IDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDS------DGLTALDLA 56

Length = 56

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 43.0 bits (101), Expect = 6e-04
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
            LAA+ G     R ++  G  PN RD  GRT LH A   G  + V +L++ GA      D
Sbjct: 88  QLAAS-GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGA------D 140

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
           PT     G+T  +LA   G + +   L
Sbjct: 141 PTLLDKDGKTPLELAEENGFREVVQLL 167

Length = 664

>gnl|CDD|238050 cd00102, IPT, Immunoglobulin-like fold, Plexins, Transcription factors (IPT)

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 20/93 (21%), Positives = 27/93 (29%), Gaps = 9/93 (9%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF-GEIEVPAEVLTDNVIRCQA 366
            I   SP        T+V I G         S +     F G +      ++   I C  
Sbjct: 2   VITSISPSSGPVSGGTEVTITG-----SNFGSGSNLRVTFGGGVPCSVLSVSSTAIVCTT 56

Query: 367 PSHA---AGRVPFYITGSNRLACSEVREFEYRE 396
           P +A    G V   +   N    S    F Y  
Sbjct: 57  PPYANPGPGPVEVTVDRGNGGITSSPLTFTYVP 89

IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers. Length = 89

>gnl|CDD|201341 pfam00612, IQ, IQ calmodulin-binding motif

 Score = 35.4 bits (83), Expect = 0.003
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 747 IVKLQAHVRGHQVRKQYK 764
            +K+QA  RG+  RK+YK
Sbjct: 4   AIKIQAAWRGYLARKRYK 21

Calmodulin-binding motif. Length = 21

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 545 RGRTALHWASYFGREETVIMLVKLGA 570
            GRT LH A+  G  E V +L+  GA
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGA 26

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	885
KOG0520	975	consensus Uncharacterized conserved protein, conta	100.0
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.86
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.83
PHA02791	284	ankyrin-like protein; Provisional	99.81
PHA02798	489	ankyrin-like protein; Provisional	99.78
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.77
PHA02791	284	ankyrin-like protein; Provisional	99.76
PHA02989	494	ankyrin repeat protein; Provisional	99.75
PHA02875	413	ankyrin repeat protein; Provisional	99.75
PHA02859	209	ankyrin repeat protein; Provisional	99.75
PHA02878	477	ankyrin repeat protein; Provisional	99.75
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.75
PHA02874	434	ankyrin repeat protein; Provisional	99.74
PHA02946	446	ankyin-like protein; Provisional	99.74
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.74
PHA02874	434	ankyrin repeat protein; Provisional	99.74
PHA03100	480	ankyrin repeat protein; Provisional	99.73
PHA02989	494	ankyrin repeat protein; Provisional	99.73
PHA02878	477	ankyrin repeat protein; Provisional	99.72
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.72
PHA03095	471	ankyrin-like protein; Provisional	99.72
PHA02743	166	Viral ankyrin protein; Provisional	99.72
PHA03100	480	ankyrin repeat protein; Provisional	99.71
PHA02875	413	ankyrin repeat protein; Provisional	99.71
PHA02859	209	ankyrin repeat protein; Provisional	99.71
PHA03095	471	ankyrin-like protein; Provisional	99.71
PHA02946	446	ankyin-like protein; Provisional	99.69
KOG0508	615	consensus Ankyrin repeat protein [General function	99.69
PHA02798	489	ankyrin-like protein; Provisional	99.68
PHA02795	437	ankyrin-like protein; Provisional	99.68
PHA02876	682	ankyrin repeat protein; Provisional	99.68
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.68
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.66
PHA02743	166	Viral ankyrin protein; Provisional	99.66
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.66
PHA02876	682	ankyrin repeat protein; Provisional	99.66
PHA02741	169	hypothetical protein; Provisional	99.64
PHA02884	300	ankyrin repeat protein; Provisional	99.64
PHA02741	169	hypothetical protein; Provisional	99.64
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.63
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.63
PHA02917	661	ankyrin-like protein; Provisional	99.63
PHA02795	437	ankyrin-like protein; Provisional	99.62
PHA02730	672	ankyrin-like protein; Provisional	99.62
KOG0510	929	consensus Ankyrin repeat protein [General function	99.62
PHA02917	661	ankyrin-like protein; Provisional	99.6
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.59
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.59
KOG0508	615	consensus Ankyrin repeat protein [General function	99.59
PHA02736	154	Viral ankyrin protein; Provisional	99.58
KOG0514	452	consensus Ankyrin repeat protein [General function	99.58
PHA02884	300	ankyrin repeat protein; Provisional	99.57
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.56
KOG0510	929	consensus Ankyrin repeat protein [General function	99.56
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.55
PHA02736	154	Viral ankyrin protein; Provisional	99.55
cd01175	85	IPT_COE IPT domain of the COE family (Col/Olf-1/EB	99.54
PHA02730	672	ankyrin-like protein; Provisional	99.52
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.51
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.51
KOG0514	452	consensus Ankyrin repeat protein [General function	99.46
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.43
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.43
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.42
PHA02792	631	ankyrin-like protein; Provisional	99.41
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.38
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.38
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.37
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.37
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.36
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.34
PHA02792	631	ankyrin-like protein; Provisional	99.34
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.33
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.29
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.28
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.27
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.27
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.24
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.24
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.24
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.24
KOG0520	975	consensus Uncharacterized conserved protein, conta	99.23
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.23
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.14
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.13
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.09
PF01833	85	TIG: IPT/TIG domain; InterPro: IPR002909 This fami	99.09
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.02
cd01179	85	IPT_plexin_repeat2 Second repeat of the IPT domain	99.01
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.01
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	98.96
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	98.93
cd00102	89	IPT Immunoglobulin-like fold, Plexins, Transcripti	98.9
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	98.8
cd00603	90	IPT_PCSR IPT domain of Plexins and Cell Surface Re	98.61
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.61
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.6
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	98.56
cd01180	94	IPT_plexin_repeat1 First repeat of the IPT domain	98.55
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.51
smart00429	90	IPT ig-like, plexins, transcription factors.	98.49
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.47
PF13606	30	Ank_3: Ankyrin repeat	98.37
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	98.37
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.29
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.26
cd02849	81	CGTase_C_term Cgtase (cyclodextrin glycosyltransfe	98.23
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.23
cd01181	99	IPT_plexin_repeat3 Third repeat of the IPT domain	98.23
COG5022	1463	Myosin heavy chain [Cytoskeleton]	98.21
PF13606	30	Ank_3: Ankyrin repeat	98.2
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.2
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.19
PTZ00014	821	myosin-A; Provisional	98.17
KOG0522	560	consensus Ankyrin repeat protein [General function	98.14
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	98.12
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.12
KOG0522	560	consensus Ankyrin repeat protein [General function	98.0
KOG2384	223	consensus Major histocompatibility complex protein	97.98
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.95
cd00604	81	IPT_CGTD IPT domain (domain D) of cyclodextrin gly	97.87
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	97.83
KOG0511	516	consensus Ankyrin repeat protein [General function	97.68
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.6
KOG2384	223	consensus Major histocompatibility complex protein	97.56
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	97.5
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.41
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	97.41
KOG0511	516	consensus Ankyrin repeat protein [General function	97.11
KOG0521	785	consensus Putative GTPase activating proteins (GAP	96.98
KOG0161	1930	consensus Myosin class II heavy chain [Cytoskeleto	96.9
KOG0162	1106	consensus Myosin class I heavy chain [Cytoskeleton	96.65
smart00015	26	IQ Short calmodulin-binding motif containing conse	96.47
smart00015	26	IQ Short calmodulin-binding motif containing conse	96.39
COG5022	1463	Myosin heavy chain [Cytoskeleton]	96.38
cd00602	101	IPT_TF IPT domain of eukaryotic transcription fact	96.01
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.91
KOG2505	591	consensus Ankyrin repeat protein [General function	95.89
KOG2505	591	consensus Ankyrin repeat protein [General function	95.87
KOG3610	1025	consensus Plexins (functional semaphorin receptors	95.57
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.28
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	95.26
cd01178	101	IPT_NFAT IPT domain of the NFAT family of transcri	94.99
cd01177	102	IPT_NFkappaB IPT domain of the transcription facto	94.6
PTZ00014	821	myosin-A; Provisional	93.59
cd01176	97	IPT_RBP-Jkappa IPT domain of the recombination sig	93.24
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	92.48
KOG0161	1930	consensus Myosin class II heavy chain [Cytoskeleto	91.59
KOG0163	1259	consensus Myosin class VI heavy chain [Cytoskeleto	89.78
KOG0163	1259	consensus Myosin class VI heavy chain [Cytoskeleto	88.07
KOG2128	1401	consensus Ras GTPase-activating protein family - I	87.87
KOG3836	605	consensus HLH transcription factor EBF/Olf-1 and r	87.72
KOG2128	1401	consensus Ras GTPase-activating protein family - I	85.75
KOG4427	1096	consensus E3 ubiquitin protein ligase [Posttransla	82.55

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=100.00  E-value=1.1e-78  Score=715.51  Aligned_cols=585  Identities=40%  Similarity=0.630  Sum_probs=458.7

Q ss_pred             cccccccCcCcchhhhhhhccCCcccCcCCCCCCCcccccccCCCCCCcccccccccccccccCCCcccCCceEEEEeec
Q 002751          235 EELGELKKLDSFGRWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSLSQEQLFSIRDFSP  314 (885)
Q Consensus       235 ~~~~~~~~~dsf~~w~~~~~~~~~~~~~~~ss~~~~w~~~~~~~~~~~~s~~~~~~~ld~~~~~~s~~~~q~f~I~d~sP  314 (885)
                      ..+++||+.|||+|||+ .+++ ..|..-.++-+.+|..+.  +...+          +...++||.. +|+|+|+||||
T Consensus       348 ~~~~~l~sgdsf~~~~~-t~~e-~~d~~q~~s~~~~~~p~~--~~~~~----------~~s~~~~S~p-~qlf~I~DfSP  412 (975)
T KOG0520|consen  348 LSELGLKSGDSFSRWAS-TFGE-ISDLGQDPSGEAVWTPEN--DPMGP----------PGSFLSPSSP-EQLFTITDFSP  412 (975)
T ss_pred             cccccccccccccchhh-hhcc-cccCCCCCccccccccCC--CcCCC----------cccccCCCCC-cceeeeeccCc
Confidence            34789999999999994 7888 444443333356887662  11111          2234677744 99999999999


Q ss_pred             CCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCCCCcceeEEEEeC-CCcccccceeee
Q 002751          315 DWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGS-NRLACSEVREFE  393 (885)
Q Consensus       315 ~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~~G~V~l~Vt~~-n~~~~Sev~~Fe  393 (885)
                      +|+|++||+||+|+|.+.    +.+..+|+||||+++|||+++++||||||||||+||+|+|||+|+ ++..|||+++|+
T Consensus       413 ~Wsy~~ggvKVlV~G~~~----~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~  488 (975)
T KOG0520|consen  413 EWSYLDGGVKVLVTGFPQ----DETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFA  488 (975)
T ss_pred             ccccCCCCcEEEEecCcc----ccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEEEEEEecccceeeeeehhee
Confidence            999999999999999643    246889999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCccccCCCchHHHHHHHHHHHhhcC-Cccccccccccccchhc--hhhhhhhhcCCCCccccc-cccccc
Q 002751          394 YREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLD-PERKWFDCTIEDCNKCK--LKNTIYSMRGDSEKDWGR-VDESPM  469 (885)
Q Consensus       394 Yr~~~~~~~~~~~~~~~~~~e~~Lq~Rl~~LL~l~-~~~~~~~~~~~~~~k~~--l~~~i~sl~~~~~~~~~~-l~e~l~  469 (885)
                      |...+....+..+ ......++.|+.||..++.-. ..........+..+..+  +.+++..+    .+.|.+ +.....
T Consensus       489 ~~~~~~~~~d~~s-~~d~~~~~sl~~rl~~~~~r~~~~~~s~~~~~n~~~~~~~~l~skv~~l----~~~~~~r~~~~~~  563 (975)
T KOG0520|consen  489 YLVQPSQQIDKLS-WEDFLFQMSLLHRLETMLNRKQSILSSKPSTENTSDAESGNLASKVVHL----LNEWAYRLLKSIS  563 (975)
T ss_pred             ecccCcccccccc-cccchhhhHHHHHHHHHHHHhHhHhhccCCccccccccchhHHHHHHHH----HHHHHHHHHhhHh
Confidence            9998877764432 112334444555555554411 11112222333333333  66666655    556666 311111


Q ss_pred             cccCCCCcccCHHHHHHHHHhHHHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCC
Q 002751          470 AIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT  548 (885)
Q Consensus       470 ~~~~~~in~~d~l~~~aL~~~l~e~Lv~~Lle~-Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~T  548 (885)
                      ...-...++++.++..+++..++.||++++++- |......|.+|+..+|++|..|+.+.+.+.+..|..++++|..|||
T Consensus       564 ~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~t  643 (975)
T KOG0520|consen  564 ENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWT  643 (975)
T ss_pred             hhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCc
Confidence            122334488999999999999999999999996 8888899999999999999999999999889999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcc-hhHH
Q 002751          549 ALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGM-DNVA  627 (885)
Q Consensus       549 PLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~-g~tA  627 (885)
                      |||||+.+|+..++..|++.|++.++..||++.++.|.|+..+|..+||.++..+|-++.+..+..++...+... +.++
T Consensus       644 pL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~~~~~~~~~s~~~~  723 (975)
T KOG0520|consen  644 PLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSNLELADPNLSADSE  723 (975)
T ss_pred             ccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhhccccccccCCCch
Confidence            999999999999999999999999999999999999999999999999999999999998888888887776321 1122


Q ss_pred             HHHhhHHHHHHHHHcCCCCCCCchhhhhcccchhhhhhhhhHHHHHHHHHHhhhhhhhhhcccCCc-----hHHHHHHHH
Q 002751          628 AALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAALIQQAFRVRSFRHRQSIQSSDD-----VSEVSVDLV  702 (885)
Q Consensus       628 a~~~~~~~ve~Ll~~~a~~~~~~~~qlslkdsLaAvR~A~~AA~rIQ~aFR~~s~R~r~L~~~~~d-----~~e~~~sil  702 (885)
                      ..    +..++..+.   ......+..+|+|.+++||.|.++|.+||..||+++++.+.+.+...+     .++.+.++.
T Consensus       724 ~~----~~~~t~~e~---s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~~~~~i~~~~~~~m~  796 (975)
T KOG0520|consen  724 ED----KAEKTSSEG---SPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDATKEQISEELAVSMK  796 (975)
T ss_pred             hh----hhhhccCCC---CCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhhcchhhhhhhhhhhh
Confidence            22    122221111   112233445699999999999999999999999999998887665432     233333333


Q ss_pred             Hhhccccccchhh-H-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002751          703 ALGSLNKVSKMIH-F-EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRW  780 (885)
Q Consensus       703 a~~~l~k~~~~~~-~-~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~i~rw  780 (885)
                      ..       .+.. + .+....||..||+.||||+.|++|+.+|+.+|+||+++||++.||+|+++.||+..++|+++||
T Consensus       797 ~~-------~a~~~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrw  869 (975)
T KOG0520|consen  797 AS-------SAFSMCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRW  869 (975)
T ss_pred             cc-------cchhcCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHH
Confidence            32       1111 1 3356789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhhhccccccccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHhhhhhh
Q 002751          781 RRRGSGLRGFRVGNSTANVA-SENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCD  857 (885)
Q Consensus       781 rrkr~~lr~~~~~~~~~~~~-~~~~~~~e~~~L~~~rkq~e~~~~~A~~rvQs~~R~~~AR~qy~rl~~e~~eak~~~  857 (885)
                      |+++.++|+|+.+...+..+ .....++.|+++|..++++++++++|+++||+|+|+++||+||||++.-+++.+...
T Consensus       870 R~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~rs~~a~qqyrR~~~~~~~~~~~~  947 (975)
T KOG0520|consen  870 RRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMFRSPKAQQQYRRLLLVYEQYQESY  947 (975)
T ss_pred             HHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999887544222 224457889999999999999999999999999999999999999997777766544

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.86  E-value=5.8e-22  Score=194.94  Aligned_cols=128  Identities=27%  Similarity=0.340  Sum_probs=100.2

Q ss_pred             CCCccCC-CCCcHHHHHHHcCChhhHHHHH-hCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCC
Q 002751          505 GPNVIDD-GGQGVVHLAAALGYEWAMRPII-ATGVSPNFRDARGRTALHWASYFGREETVIMLVKL-GAAPGAVEDPTPA  581 (885)
Q Consensus       505 din~~D~-~G~TpLH~AA~~G~~~iV~~LL-~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAd~n~~dd~~~~  581 (885)
                      .+|.+|. +|+|||||||..|+.++|.+|+ ..++.+|.+|..||||||+||..|+.++|+.|+.+ |+|+|+.+     
T Consensus        29 SL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~t-----  103 (226)
T KOG4412|consen   29 SLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATT-----  103 (226)
T ss_pred             hhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceec-----
Confidence            4566655 7888888888888888888888 56788888888888888888888888888888877 88888777     


Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751          582 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV  644 (885)
Q Consensus       582 d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a  644 (885)
                       ..|+||||||+..|..+|+.+|+++|     +.++++|.. |.+|++.    |..++++.|+..++
T Consensus       104 -n~G~T~LHyAagK~r~eIaqlLle~g-----a~i~~kD~~-~qtplHRAAavGklkvie~Li~~~a  163 (226)
T KOG4412|consen  104 -NGGQTCLHYAAGKGRLEIAQLLLEKG-----ALIRIKDKQ-GQTPLHRAAAVGKLKVIEYLISQGA  163 (226)
T ss_pred             -CCCcceehhhhcCChhhHHHHHHhcC-----CCCcccccc-cCchhHHHHhccchhhHHHHHhcCC
Confidence             58888888888888888888888888     666777766 6665544    45678888888887

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=1.8e-20  Score=184.53  Aligned_cols=138  Identities=23%  Similarity=0.308  Sum_probs=107.0

Q ss_pred             HHHHHH-hCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751          495 LVWKIH-EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP  572 (885)
Q Consensus       495 Lv~~Ll-e~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~-Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~  572 (885)
                      ++.+|+ +.+..+|.+|..||||||.||..|+.++|+.|+.+ |+|+|..+..|+||||||+..|+.+++.+|++.|+.+
T Consensus        53 iv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i  132 (226)
T KOG4412|consen   53 IVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALI  132 (226)
T ss_pred             HHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCC
Confidence            344444 56777777888888888888888888888888877 8888888888888888888888888888888888887


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh----hHHHHHHHHHcCC
Q 002751          573 GAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----AEKANETAAQIGV  644 (885)
Q Consensus       573 n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~----~~~~ve~Ll~~~a  644 (885)
                      +++|      ..|.||||-|+.-|..+++++|+..|     +.+|..|+. |.||++.+    +.++..+|+..++
T Consensus       133 ~~kD------~~~qtplHRAAavGklkvie~Li~~~-----a~~n~qDk~-G~TpL~~al~e~~~d~a~lLV~~gA  196 (226)
T KOG4412|consen  133 RIKD------KQGQTPLHRAAAVGKLKVIEYLISQG-----APLNTQDKY-GFTPLHHALAEGHPDVAVLLVRAGA  196 (226)
T ss_pred             cccc------cccCchhHHHHhccchhhHHHHHhcC-----CCCCccccc-CccHHHHHHhccCchHHHHHHHhcc
Confidence            7766      68888888888888888888888877     667777777 77777665    4566677777776

>PHA02791 ankyrin-like protein; Provisional

Probab=99.81  E-value=1.9e-19  Score=196.22  Aligned_cols=169  Identities=11%  Similarity=0.012  Sum_probs=132.7

Q ss_pred             ccCCCCcccC--HHHHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCC-
Q 002751          471 IEGDCPNSRD--KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR-  547 (885)
Q Consensus       471 ~~~~~in~~d--~l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~-  547 (885)
                      ..+.+++..+  ..++.+.... ...+++.|++.|+++|.+|..|+||||+||..|+.+++++|+.+|++++.++..|+ 
T Consensus        51 ~~ga~~n~~d~~TpLh~Aa~~g-~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~  129 (284)
T PHA02791         51 NAGALKNLLENEFPLHQAATLE-DTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWK  129 (284)
T ss_pred             HCcCCCcCCCCCCHHHHHHHCC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCc
Confidence            3444554433  3344444332 45567888999999999999999999999999999999999999999999999986 


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHH
Q 002751          548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA  627 (885)
Q Consensus       548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tA  627 (885)
                      ||||+|+..|+.++|++|+++|++.  .+.     ..|.||||+|+.+|+.+++++|+++|++++..+....... ...|
T Consensus       130 TpL~~Aa~~g~~eivk~LL~~~~~~--~d~-----~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~-L~~A  201 (284)
T PHA02791        130 TSFYHAVMLNDVSIVSYFLSEIPST--FDL-----AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPD-IKLA  201 (284)
T ss_pred             HHHHHHHHcCCHHHHHHHHhcCCcc--ccc-----ccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChH-HHHH
Confidence            8999999999999999999987643  221     2589999999999999999999999965544332211111 3457


Q ss_pred             HHHhhHHHHHHHHHcCC-CCCC
Q 002751          628 AALAAEKANETAAQIGV-QSDG  648 (885)
Q Consensus       628 a~~~~~~~ve~Ll~~~a-~~~~  648 (885)
                      +..+..++|+.|+++++ .+..
T Consensus       202 a~~~~~e~v~lLl~~Ga~in~~  223 (284)
T PHA02791        202 IDNKDLEMLQALFKYDINIYSV  223 (284)
T ss_pred             HHcCCHHHHHHHHHCCCCCccC
Confidence            78888999999999998 5444

>PHA02798 ankyrin-like protein; Provisional

Probab=99.78  E-value=1.8e-18  Score=202.66  Aligned_cols=174  Identities=14%  Similarity=0.009  Sum_probs=144.2

Q ss_pred             ccccCCCCcccCHHHHHHHHHh--------HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC---ChhhHHHHHhCCC
Q 002751          469 MAIEGDCPNSRDKLIQNLLRNR--------LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG---YEWAMRPIIATGV  537 (885)
Q Consensus       469 ~~~~~~~in~~d~l~~~aL~~~--------l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G---~~~iV~~LL~~Ga  537 (885)
                      +..+|+++|..+..+.++|...        ....+++.|+++|+++|.+|..|.||||+|+..|   +.+++++|+++|+
T Consensus        57 Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Ga  136 (489)
T PHA02798         57 FINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGA  136 (489)
T ss_pred             HHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCC
Confidence            3567889988887776666432        2357889999999999999999999999999886   6799999999999


Q ss_pred             CCCccCCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhc----CcHHHHHHHHHcCCC
Q 002751          538 SPNFRDARGRTALHWASYFGR---EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR----GHKGIAGYLAEADLS  610 (885)
Q Consensus       538 din~~D~~G~TPLH~Aa~~G~---~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~----G~~eiv~lLLe~Ga~  610 (885)
                      ++|.+|..|+||||+|+..|+   .+++++|++.|++++..++     ..|.||||.++..    ++.+++++|+++|++
T Consensus       137 dvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~-----~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~  211 (489)
T PHA02798        137 DTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNN-----KEKYDTLHCYFKYNIDRIDADILKLFVDNGFI  211 (489)
T ss_pred             CccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccC-----cCCCcHHHHHHHhccccCCHHHHHHHHHCCCC
Confidence            999999999999999999998   9999999999999988763     5788999988654    478899999998876


Q ss_pred             CCC----------------------------------cCCccccCcchhHHHHHh----hHHHHHHHHHcCC-CCCC
Q 002751          611 SHL----------------------------------SSLTVNENGMDNVAAALA----AEKANETAAQIGV-QSDG  648 (885)
Q Consensus       611 ~~~----------------------------------~~ln~~d~~~g~tAa~~~----~~~~ve~Ll~~~a-~~~~  648 (885)
                      ++.                                  .+++.++.. |.||++.+    ..++++.|++.|+ .+..
T Consensus       212 i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~-G~TPL~~A~~~~~~~~v~~LL~~GAdin~~  287 (489)
T PHA02798        212 INKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDEL-GFNPLYYSVSHNNRKIFEYLLQLGGDINII  287 (489)
T ss_pred             cccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcC-CccHHHHHHHcCcHHHHHHHHHcCCccccc
Confidence            543                                  357777777 88777664    5788999999998 4443

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.77  E-value=2.7e-18  Score=206.68  Aligned_cols=167  Identities=14%  Similarity=0.028  Sum_probs=139.6

Q ss_pred             cccC-CCCccc-CHHHHHHHHHhH-----HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCh--hhHHHHHhCCCCCC
Q 002751          470 AIEG-DCPNSR-DKLIQNLLRNRL-----CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYE--WAMRPIIATGVSPN  540 (885)
Q Consensus       470 ~~~~-~~in~~-d~l~~~aL~~~l-----~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~--~iV~~LL~~Gadin  540 (885)
                      +..| .++|.+ +..+.++|+...     ...+++.|+++|+++|.+|..|.||||+|+..|+.  ++|++|+++|+++|
T Consensus       162 Le~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN  241 (764)
T PHA02716        162 VDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMD  241 (764)
T ss_pred             HHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCC
Confidence            4566 888887 666667765421     23578999999999999999999999999999964  89999999999999


Q ss_pred             ccCCCCCCHHHHH-------------------------------------HHcCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 002751          541 FRDARGRTALHWA-------------------------------------SYFGREETVIMLVKLGAAPGAVEDPTPAFP  583 (885)
Q Consensus       541 ~~D~~G~TPLH~A-------------------------------------a~~G~~eiV~~LL~~GAd~n~~dd~~~~d~  583 (885)
                      .+|..|+||||+|                                     +..|+.+++++|++.|++++.++      .
T Consensus       242 ~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD------~  315 (764)
T PHA02716        242 MKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKD------S  315 (764)
T ss_pred             CCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccC------C
Confidence            9999999999975                                     44578899999999999998877      6


Q ss_pred             CCCcHHHHHHh--cCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh------------------hHHHHHHHHHcC
Q 002751          584 GGQTAADLASS--RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA------------------AEKANETAAQIG  643 (885)
Q Consensus       584 ~G~TPLhlAa~--~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~------------------~~~~ve~Ll~~~  643 (885)
                      .|+||||+|+.  .++.+++++|+++|     ++++.++.. |.+|++.+                  ..++++.|++.|
T Consensus       316 ~G~TPLH~Aaa~~~~~~eIVklLLe~G-----ADIN~kD~~-G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G  389 (764)
T PHA02716        316 AGRTCLHQYILRHNISTDIIKLLHEYG-----NDLNEPDNI-GNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG  389 (764)
T ss_pred             CCCCHHHHHHHHhCCCchHHHHHHHcC-----CCCccCCCC-CCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC
Confidence            99999999764  56899999999999     566777776 88888753                  568999999999


Q ss_pred             C-CCCC
Q 002751          644 V-QSDG  648 (885)
Q Consensus       644 a-~~~~  648 (885)
                      + .+..
T Consensus       390 ADIn~k  395 (764)
T PHA02716        390 ADITAV  395 (764)
T ss_pred             CCCCCc
Confidence            8 4443

>PHA02791 ankyrin-like protein; Provisional

Probab=99.76  E-value=5.4e-18  Score=184.90  Aligned_cols=151  Identities=18%  Similarity=0.111  Sum_probs=125.2

Q ss_pred             HHHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHH
Q 002751          482 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREET  561 (885)
Q Consensus       482 l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~ei  561 (885)
                      .++.+.... ...+++.|++.|+++|..|  |.||||+|+..|+.++|++|+.+|+++|.+|..|+||||+||..|+.++
T Consensus        33 pLh~Aa~~g-~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~ei  109 (284)
T PHA02791         33 ALYYAIADN-NVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQT  109 (284)
T ss_pred             HHHHHHHcC-CHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence            344444433 4567788999999998765  7899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCCCCCCCCCCCC-CcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHH
Q 002751          562 VIMLVKLGAAPGAVEDPTPAFPGG-QTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAA  640 (885)
Q Consensus       562 V~~LL~~GAd~n~~dd~~~~d~~G-~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll  640 (885)
                      +++|+++|++++..+      ..| .||||+|+..|+.+++++|+++|.+.  .+.... ..+...|+..++.++++.|+
T Consensus       110 vk~Ll~~gadin~~~------~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g-~TpLh~Aa~~g~~eiv~lLL  180 (284)
T PHA02791        110 VKLFVKKNWRLMFYG------KTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAIL-LSCIHITIKNGHVDMMILLL  180 (284)
T ss_pred             HHHHHHCCCCcCccC------CCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccC-ccHHHHHHHcCCHHHHHHHH
Confidence            999999999998877      466 58999999999999999999987322  111111 12255666777889999999


Q ss_pred             HcCC
Q 002751          641 QIGV  644 (885)
Q Consensus       641 ~~~a  644 (885)
                      +.++
T Consensus       181 ~~gA  184 (284)
T PHA02791        181 DYMT  184 (284)
T ss_pred             HCCC
Confidence            9998

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.75  E-value=9.9e-18  Score=196.65  Aligned_cols=170  Identities=10%  Similarity=-0.000  Sum_probs=121.7

Q ss_pred             ccccCCCCcccCHHHHHHHHHhH------HHHHHHHHHhCCCCC-CccCCCCCcHHHHHHHc--CChhhHHHHHhCCCCC
Q 002751          469 MAIEGDCPNSRDKLIQNLLRNRL------CEWLVWKIHEGGKGP-NVIDDGGQGVVHLAAAL--GYEWAMRPIIATGVSP  539 (885)
Q Consensus       469 ~~~~~~~in~~d~l~~~aL~~~l------~e~Lv~~Lle~Gadi-n~~D~~G~TpLH~AA~~--G~~~iV~~LL~~Gadi  539 (885)
                      ++..|+++|.++..+.++|....      ...+++.|+++|+++ +.+|..|.||||+|+..  ++.++|++|+++|+++
T Consensus        94 Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi  173 (494)
T PHA02989         94 LLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNL  173 (494)
T ss_pred             HHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence            34667778777776666654221      245677788888888 67888888888887654  5778888888888888


Q ss_pred             Cc-cCCCCCCHHHHHHHcC----CHHHHHHHHHcCCCCCCCC--------------------------------CCCCCC
Q 002751          540 NF-RDARGRTALHWASYFG----REETVIMLVKLGAAPGAVE--------------------------------DPTPAF  582 (885)
Q Consensus       540 n~-~D~~G~TPLH~Aa~~G----~~eiV~~LL~~GAd~n~~d--------------------------------d~~~~d  582 (885)
                      +. .+..|.||||+|+..+    +.+++++|++.|++++..+                                +++.+|
T Consensus       174 ~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d  253 (494)
T PHA02989        174 FEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKD  253 (494)
T ss_pred             cccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCC
Confidence            87 5777888888877653    7788888888888877654                                234566


Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751          583 PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV  644 (885)
Q Consensus       583 ~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a  644 (885)
                      ..|+||||+|+..|+.+++++|+++|     ++++..+.. |.||++.    ++.++|+.|++...
T Consensus       254 ~~G~TpL~~Aa~~~~~~~v~~LL~~G-----adin~~d~~-G~TpL~~A~~~~~~~iv~~LL~~~p  313 (494)
T PHA02989        254 KKGFNPLLISAKVDNYEAFNYLLKLG-----DDIYNVSKD-GDTVLTYAIKHGNIDMLNRILQLKP  313 (494)
T ss_pred             CCCCCHHHHHHHhcCHHHHHHHHHcC-----CCccccCCC-CCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            77888888888888888888888888     445555555 5555444    45677777777663

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.75  E-value=1e-17  Score=191.73  Aligned_cols=155  Identities=18%  Similarity=0.135  Sum_probs=129.1

Q ss_pred             HHHHHHHHhHHHHHHHHHHhCCCCCC-ccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHH
Q 002751          482 LIQNLLRNRLCEWLVWKIHEGGKGPN-VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE  560 (885)
Q Consensus       482 l~~~aL~~~l~e~Lv~~Lle~Gadin-~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~e  560 (885)
                      .++.++... ...+++.|++.|.+++ ..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus        71 ~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~  149 (413)
T PHA02875         71 ELHDAVEEG-DVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIK  149 (413)
T ss_pred             HHHHHHHCC-CHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            455555544 3445788888998764 45778999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHH
Q 002751          561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAA  640 (885)
Q Consensus       561 iV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll  640 (885)
                      ++++|+++|++++..+      ..|.||||+|+..|+.+++++|+++|++++..+.+..... ...|+..+..++++.|+
T Consensus       150 ~v~~Ll~~g~~~~~~d------~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~-l~~A~~~~~~~iv~~Ll  222 (413)
T PHA02875        150 GIELLIDHKACLDIED------CCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAA-LCYAIENNKIDIVRLFI  222 (413)
T ss_pred             HHHHHHhcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchH-HHHHHHcCCHHHHHHHH
Confidence            9999999999998877      7999999999999999999999999965554332211111 23466777889999999


Q ss_pred             HcCC
Q 002751          641 QIGV  644 (885)
Q Consensus       641 ~~~a  644 (885)
                      ++++
T Consensus       223 ~~ga  226 (413)
T PHA02875        223 KRGA  226 (413)
T ss_pred             HCCc
Confidence            9998

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.75  E-value=1.4e-17  Score=173.98  Aligned_cols=130  Identities=15%  Similarity=0.084  Sum_probs=108.7

Q ss_pred             HHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHc---CChhhHHHHHhCCCCCCccCCCCCCHHHHHHH--cCCHHHHHHH
Q 002751          492 CEWLVWKIHEGGKGPNVID-DGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALHWASY--FGREETVIML  565 (885)
Q Consensus       492 ~e~Lv~~Lle~Gadin~~D-~~G~TpLH~AA~~---G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~--~G~~eiV~~L  565 (885)
                      ...+++.|+++|+++|.++ ..|.||||+|+..   ++.+++++|+++|+++|.+|..|.||||+|+.  .++.+++++|
T Consensus        65 ~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~L  144 (209)
T PHA02859         65 NVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLL  144 (209)
T ss_pred             CHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHH
Confidence            3567788889999999887 4799999988764   47889999999999999999999999999876  4688999999


Q ss_pred             HHcCCCCCCCCCCCCCCCCCCcHHHH-HHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhH
Q 002751          566 VKLGAAPGAVEDPTPAFPGGQTAADL-ASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAE  633 (885)
Q Consensus       566 L~~GAd~n~~dd~~~~d~~G~TPLhl-Aa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~  633 (885)
                      +++|++++.++      ..|.||||. |+..|+.+++++|+++|     ++++.++.. |.+|.+.+..
T Consensus       145 i~~gadin~~d------~~g~t~Lh~~a~~~~~~~iv~~Ll~~G-----adi~~~d~~-g~tpl~la~~  201 (209)
T PHA02859        145 IDSGVSFLNKD------FDNNNILYSYILFHSDKKIFDFLTSLG-----IDINETNKS-GYNCYDLIKF  201 (209)
T ss_pred             HHcCCCccccc------CCCCcHHHHHHHhcCCHHHHHHHHHcC-----CCCCCCCCC-CCCHHHHHhh
Confidence            99999988877      689999995 56678899999999998     666777776 8888888654

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.75  E-value=1.5e-17  Score=194.14  Aligned_cols=144  Identities=17%  Similarity=0.164  Sum_probs=124.6

Q ss_pred             HHHHHHHhCCCCCCccCCC-CCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751          494 WLVWKIHEGGKGPNVIDDG-GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP  572 (885)
Q Consensus       494 ~Lv~~Lle~Gadin~~D~~-G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~  572 (885)
                      .+++.|+++|+++|..|.. |.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++.|+++
T Consensus       148 ~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i  227 (477)
T PHA02878        148 EITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST  227 (477)
T ss_pred             HHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence            4678888999999999998 999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcHHHHHHhc-CcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh--hHHHHHHHHHcCC-CCCC
Q 002751          573 GAVEDPTPAFPGGQTAADLASSR-GHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA--AEKANETAAQIGV-QSDG  648 (885)
Q Consensus       573 n~~dd~~~~d~~G~TPLhlAa~~-G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~--~~~~ve~Ll~~~a-~~~~  648 (885)
                      +.++      ..|.||||+|+.. ++.+++++|+++|+     +++.++...|.+|++.+  ..++++.|++.++ .+..
T Consensus       228 n~~d------~~g~TpLh~A~~~~~~~~iv~~Ll~~ga-----dvn~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin~~  296 (477)
T PHA02878        228 DARD------KCGNTPLHISVGYCKDYDILKLLLEHGV-----DVNAKSYILGLTALHSSIKSERKLKLLLEYGADINSL  296 (477)
T ss_pred             CCCC------CCCCCHHHHHHHhcCCHHHHHHHHHcCC-----CCCccCCCCCCCHHHHHccCHHHHHHHHHCCCCCCCc
Confidence            8877      6999999999975 78999999999994     45555442266666654  5688999999998 4443

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.75  E-value=5e-18  Score=194.18  Aligned_cols=130  Identities=25%  Similarity=0.257  Sum_probs=76.0

Q ss_pred             CCCCcccCHHHHHHHHHh---HHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCC
Q 002751          473 GDCPNSRDKLIQNLLRNR---LCEWLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT  548 (885)
Q Consensus       473 ~~~in~~d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D-~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~T  548 (885)
                      +.+++..|..+.++|+-.   ..-.+++.|+++|+++|..+ .-|.|||||||+.|+..+|.+|+++||||+.+|..|.|
T Consensus        68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~  147 (600)
T KOG0509|consen   68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLT  147 (600)
T ss_pred             CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCc
Confidence            455555555444444211   11234455556666666655 44566666666666666666666666666666666666


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q 002751          549 ALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD  608 (885)
Q Consensus       549 PLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~G  608 (885)
                      |||+||.+|+.-+|.+||..|+++|.+|      .+|+||||+|+..|+...++.|+..|
T Consensus       148 ~lHla~~~~~~~~vayll~~~~d~d~~D------~~grTpLmwAaykg~~~~v~~LL~f~  201 (600)
T KOG0509|consen  148 PLHLAAQFGHTALVAYLLSKGADIDLRD------NNGRTPLMWAAYKGFALFVRRLLKFG  201 (600)
T ss_pred             HHHHHHHhCchHHHHHHHHhcccCCCcC------CCCCCHHHHHHHhcccHHHHHHHHhc
Confidence            6666666666666666666666665555      46666666666666655566666655

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.74  E-value=2.5e-17  Score=190.02  Aligned_cols=111  Identities=18%  Similarity=0.208  Sum_probs=101.6

Q ss_pred             HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002751          495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGA  574 (885)
Q Consensus       495 Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~  574 (885)
                      +++.|++.|++++.+|..|.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|+.+++++|++.|++++.
T Consensus       106 ~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~  185 (434)
T PHA02874        106 MIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV  185 (434)
T ss_pred             HHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC
Confidence            45567778888999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCC
Q 002751          575 VEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSS  611 (885)
Q Consensus       575 ~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~  611 (885)
                      .+      ..|.||||+|+..|+.+++++|++.|++.
T Consensus       186 ~~------~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i  216 (434)
T PHA02874        186 KD------NNGESPLHNAAEYGDYACIKLLIDHGNHI  216 (434)
T ss_pred             CC------CCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence            77      68999999999999999999999999553

>PHA02946 ankyin-like protein; Provisional

Probab=99.74  E-value=2.4e-17  Score=191.05  Aligned_cols=141  Identities=18%  Similarity=0.197  Sum_probs=103.9

Q ss_pred             HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCC--HHHHHHHHHcC
Q 002751          492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR--EETVIMLVKLG  569 (885)
Q Consensus       492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~--~eiV~~LL~~G  569 (885)
                      ...+++.|+++|+++|.+|..|.||||+||..|+.++|++||++|+++|.+|..|+||||+|+..++  .+++++|+++|
T Consensus        51 ~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~G  130 (446)
T PHA02946         51 DERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYG  130 (446)
T ss_pred             CHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence            3456777778888888888888888888888888888888888888888888888888888877653  67788888888


Q ss_pred             CCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh------HHHHHHHHHcC
Q 002751          570 AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA------EKANETAAQIG  643 (885)
Q Consensus       570 Ad~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~------~~~ve~Ll~~~  643 (885)
                      ++++...+     ..|.|||| |+..|+.+++++|++.|     ++++.++.. |.+|++.+.      .++++.|++.+
T Consensus       131 adin~~~d-----~~g~tpL~-aa~~~~~~vv~~Ll~~g-----ad~~~~d~~-G~t~Lh~A~~~~~~~~~~v~~Ll~~G  198 (446)
T PHA02946        131 AKINNSVD-----EEGCGPLL-ACTDPSERVFKKIMSIG-----FEARIVDKF-GKNHIHRHLMSDNPKASTISWMMKLG  198 (446)
T ss_pred             CCcccccC-----CCCCcHHH-HHHCCChHHHHHHHhcc-----ccccccCCC-CCCHHHHHHHhcCCCHHHHHHHHHcC
Confidence            88775322     57788886 55567778888888777     444555555 666655432      36677777777


Q ss_pred             C
Q 002751          644 V  644 (885)
Q Consensus       644 a  644 (885)
                      +
T Consensus       199 a  199 (446)
T PHA02946        199 I  199 (446)
T ss_pred             C
Confidence            6

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.74  E-value=6.1e-18  Score=193.51  Aligned_cols=152  Identities=26%  Similarity=0.299  Sum_probs=84.6

Q ss_pred             cccCCCCcccC-HHHHHHHH---HhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCC
Q 002751          470 AIEGDCPNSRD-KLIQNLLR---NRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR  545 (885)
Q Consensus       470 ~~~~~~in~~d-~l~~~aL~---~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~  545 (885)
                      +.+++++|... .+..++|+   .+.+-.++.+|+++|+||+.+|.+|.||||+||..|+.-+|-+||..|+++|.+|.+
T Consensus        98 i~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~  177 (600)
T KOG0509|consen   98 ISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNN  177 (600)
T ss_pred             HHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCC
Confidence            45555555554 22233332   122344455556666666666666666666666666666666666666666666666


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh
Q 002751          546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN  625 (885)
Q Consensus       546 G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~  625 (885)
                      |+|||||||..|+...+..||..|+.++..|+     ..|.||||+|+..|+..++.+|++.|     ++.+..+.. |+
T Consensus       178 grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~-----~~g~TpLHwa~~~gN~~~v~Ll~~g~-----~~~d~~~~~-g~  246 (600)
T KOG0509|consen  178 GRTPLMWAAYKGFALFVRRLLKFGASLLLTDD-----NHGNTPLHWAVVGGNLTAVKLLLEGG-----ADLDKTNTN-GK  246 (600)
T ss_pred             CCCHHHHHHHhcccHHHHHHHHhccccccccc-----ccCCchHHHHHhcCCcceEehhhhcC-----CcccccccC-CC
Confidence            66666666666665556666666666655553     55666666666666666655555544     344444444 55


Q ss_pred             HHHHHhh
Q 002751          626 VAAALAA  632 (885)
Q Consensus       626 tAa~~~~  632 (885)
                      +|.+.+.
T Consensus       247 tp~~LA~  253 (600)
T KOG0509|consen  247 TPFDLAQ  253 (600)
T ss_pred             CHHHHHH
Confidence            5555543

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.74  E-value=2.6e-17  Score=189.89  Aligned_cols=160  Identities=18%  Similarity=0.139  Sum_probs=123.2

Q ss_pred             ccCCCCcccCHHHHHHHHHh---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCC
Q 002751          471 IEGDCPNSRDKLIQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR  547 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~  547 (885)
                      ..|.+++..+..+.++|...   ....+++.|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus       112 ~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~  191 (434)
T PHA02874        112 DCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGE  191 (434)
T ss_pred             HCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCC
Confidence            34666666666555555322   133467888999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHH
Q 002751          548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA  627 (885)
Q Consensus       548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tA  627 (885)
                      ||||+|+..|+.+++++|++.|++++..+      ..|.||||+|+..++ .++.+|+ .|     .+++..+.. |.+|
T Consensus       192 tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~------~~g~TpL~~A~~~~~-~~i~~Ll-~~-----~~in~~d~~-G~Tp  257 (434)
T PHA02874        192 SPLHNAAEYGDYACIKLLIDHGNHIMNKC------KNGFTPLHNAIIHNR-SAIELLI-NN-----ASINDQDID-GSTP  257 (434)
T ss_pred             CHHHHHHHcCCHHHHHHHHhCCCCCcCCC------CCCCCHHHHHHHCCh-HHHHHHH-cC-----CCCCCcCCC-CCCH
Confidence            99999999999999999999999987766      577777777777654 3445554 34     344555555 6666


Q ss_pred             HHHhh-----HHHHHHHHHcCC
Q 002751          628 AALAA-----EKANETAAQIGV  644 (885)
Q Consensus       628 a~~~~-----~~~ve~Ll~~~a  644 (885)
                      ++.+.     .++++.|++.++
T Consensus       258 Lh~A~~~~~~~~iv~~Ll~~ga  279 (434)
T PHA02874        258 LHHAINPPCDIDIIDILLYHKA  279 (434)
T ss_pred             HHHHHhcCCcHHHHHHHHHCcC
Confidence            65543     467777777776

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.73  E-value=2.9e-17  Score=191.24  Aligned_cols=162  Identities=18%  Similarity=0.152  Sum_probs=123.1

Q ss_pred             ccCCCCcccCHHHHHHHHHhH-----HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCC
Q 002751          471 IEGDCPNSRDKLIQNLLRNRL-----CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR  545 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL~~~l-----~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~  545 (885)
                      ..|.+++..+..+.+++....     ...+++.|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus       129 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~  208 (480)
T PHA03100        129 DNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIE  208 (480)
T ss_pred             HcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCC
Confidence            456666655555444443222     455677788888888888888888888888888888888888888888888887


Q ss_pred             C------CCHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCc
Q 002751          546 G------RTALHWASYFGR--EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLT  617 (885)
Q Consensus       546 G------~TPLH~Aa~~G~--~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln  617 (885)
                      |      .||||+|+..|+  .+++++|++.|++++.++      ..|.||||+|+..|+.+++++|+++|+     +++
T Consensus       209 ~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d------~~g~TpL~~A~~~~~~~iv~~Ll~~ga-----d~n  277 (480)
T PHA03100        209 TLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKD------VYGFTPLHYAVYNNNPEFVKYLLDLGA-----NPN  277 (480)
T ss_pred             CCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCC
Confidence            7      788888888888  888888888888887776      688888888888888888888888884     455


Q ss_pred             cccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751          618 VNENGMDNVAAAL----AAEKANETAAQIGV  644 (885)
Q Consensus       618 ~~d~~~g~tAa~~----~~~~~ve~Ll~~~a  644 (885)
                      ..+.. |.+|++.    +..++++.|++.++
T Consensus       278 ~~d~~-g~tpl~~A~~~~~~~iv~~Ll~~g~  307 (480)
T PHA03100        278 LVNKY-GDTPLHIAILNNNKEIFKLLLNNGP  307 (480)
T ss_pred             ccCCC-CCcHHHHHHHhCCHHHHHHHHhcCC
Confidence            55555 6655544    45788888888886

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.73  E-value=4.1e-17  Score=191.45  Aligned_cols=171  Identities=13%  Similarity=0.115  Sum_probs=137.4

Q ss_pred             cccccCCCCcccCH---HHHHHHHH-----hHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHc---CChhhHHHHHhCC
Q 002751          468 PMAIEGDCPNSRDK---LIQNLLRN-----RLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAAL---GYEWAMRPIIATG  536 (885)
Q Consensus       468 l~~~~~~~in~~d~---l~~~aL~~-----~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~---G~~~iV~~LL~~G  536 (885)
                      +++..|+++|.++.   .++.++..     .....+++.|+++|+++|.+|..|.||||.|+..   |+.+++++|+++|
T Consensus        55 ~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G  134 (494)
T PHA02989         55 LLIDNGADVNYKGYIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG  134 (494)
T ss_pred             HHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC
Confidence            34567888886652   33333321     1235678999999999999999999999988765   6789999999999


Q ss_pred             CCC-CccCCCCCCHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC----cHHHHHHHHHcCC
Q 002751          537 VSP-NFRDARGRTALHWASYF--GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG----HKGIAGYLAEADL  609 (885)
Q Consensus       537 adi-n~~D~~G~TPLH~Aa~~--G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G----~~eiv~lLLe~Ga  609 (885)
                      +|+ +.+|..|+||||+|+..  ++.+++++|+++|++++...+     ..|.||||+|+.++    +.+++++|+++|+
T Consensus       135 adin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~-----~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga  209 (494)
T PHA02989        135 INVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTS-----LYGLTPMNIYLRNDIDVISIKVIKYLIKKGV  209 (494)
T ss_pred             CCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccc-----ccCCChHHHHHhcccccccHHHHHHHHhCCC
Confidence            999 89999999999998764  689999999999999987432     68999999998764    8999999999998


Q ss_pred             CCCCcC---------------------------------CccccCcchhHHHHHh----hHHHHHHHHHcCC
Q 002751          610 SSHLSS---------------------------------LTVNENGMDNVAAALA----AEKANETAAQIGV  644 (885)
Q Consensus       610 ~~~~~~---------------------------------ln~~d~~~g~tAa~~~----~~~~ve~Ll~~~a  644 (885)
                      +++..+                                 ++.++.. |.||++.+    ..++++.|++.|+
T Consensus       210 ~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~-G~TpL~~Aa~~~~~~~v~~LL~~Ga  280 (494)
T PHA02989        210 NIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKK-GFNPLLISAKVDNYEAFNYLLKLGD  280 (494)
T ss_pred             CccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCC-CCCHHHHHHHhcCHHHHHHHHHcCC
Confidence            776433                                 4556665 77766654    5789999999998

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.72  E-value=3.4e-17  Score=191.29  Aligned_cols=161  Identities=17%  Similarity=0.081  Sum_probs=134.0

Q ss_pred             cccCCCCcccCHH-HHHHHHHh---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCC
Q 002751          470 AIEGDCPNSRDKL-IQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR  545 (885)
Q Consensus       470 ~~~~~~in~~d~l-~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~  545 (885)
                      ...|+++|..+.. +.++|+..   ....+++.|++.|+++|..|..|.||||+|+..|+.+++++|++.|+++|.+|..
T Consensus       154 l~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~  233 (477)
T PHA02878        154 LSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKC  233 (477)
T ss_pred             HHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC
Confidence            4567788776665 55555322   2456788899999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcch
Q 002751          546 GRTALHWASYF-GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMD  624 (885)
Q Consensus       546 G~TPLH~Aa~~-G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g  624 (885)
                      |+||||+|+.. ++.+++++|+++|++++..++     ..|.||||+|  .++.+++++|+++|     ++++..+.. |
T Consensus       234 g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~-----~~g~TpLh~A--~~~~~~v~~Ll~~g-----adin~~d~~-g  300 (477)
T PHA02878        234 GNTPLHISVGYCKDYDILKLLLEHGVDVNAKSY-----ILGLTALHSS--IKSERKLKLLLEYG-----ADINSLNSY-K  300 (477)
T ss_pred             CCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCC-----CCCCCHHHHH--ccCHHHHHHHHHCC-----CCCCCcCCC-C
Confidence            99999999975 799999999999999998773     4799999999  57889999999999     666777777 8


Q ss_pred             hHHHHHhhH-----HHHHHHHHcC
Q 002751          625 NVAAALAAE-----KANETAAQIG  643 (885)
Q Consensus       625 ~tAa~~~~~-----~~ve~Ll~~~  643 (885)
                      .||++.+..     ++++.|+...
T Consensus       301 ~TpL~~A~~~~~~~~~~~~li~~~  324 (477)
T PHA02878        301 LTPLSSAVKQYLCINIGRILISNI  324 (477)
T ss_pred             CCHHHHHHHHcCccchHHHHHHHH
Confidence            888887653     3455555543

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.72  E-value=3.2e-17  Score=197.45  Aligned_cols=163  Identities=17%  Similarity=0.091  Sum_probs=137.5

Q ss_pred             cccCCCCcccCHHHHHHHHHhH-----HHHHHHHHHhCCCCCCccCCCCCcHHHHH------------------------
Q 002751          470 AIEGDCPNSRDKLIQNLLRNRL-----CEWLVWKIHEGGKGPNVIDDGGQGVVHLA------------------------  520 (885)
Q Consensus       470 ~~~~~~in~~d~l~~~aL~~~l-----~e~Lv~~Lle~Gadin~~D~~G~TpLH~A------------------------  520 (885)
                      ...|.++|.++..+.++|....     ...+++.|+++|+++|.+|..|+||||+|                        
T Consensus       199 Le~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~  278 (764)
T PHA02716        199 CNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKV  278 (764)
T ss_pred             HHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccc
Confidence            4678899988887777774332     24678999999999999999999999975                        


Q ss_pred             -------------HHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 002751          521 -------------AALGYEWAMRPIIATGVSPNFRDARGRTALHWASY--FGREETVIMLVKLGAAPGAVEDPTPAFPGG  585 (885)
Q Consensus       521 -------------A~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~--~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G  585 (885)
                                   |..|+.+++++|++.|+++|.+|..|+||||+|+.  .++.+++++|++.|++++.++      ..|
T Consensus       279 ~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD------~~G  352 (764)
T PHA02716        279 KNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPD------NIG  352 (764)
T ss_pred             ccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCC------CCC
Confidence                         34577889999999999999999999999999875  568999999999999999887      699


Q ss_pred             CcHHHHHHh--------------cCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH--------hhHHHHHHHHHcC
Q 002751          586 QTAADLASS--------------RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL--------AAEKANETAAQIG  643 (885)
Q Consensus       586 ~TPLhlAa~--------------~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~--------~~~~~ve~Ll~~~  643 (885)
                      +||||+|+.              .|+.+++++|+++|     ++++.++.. |.+|++.        +..++++.|++.+
T Consensus       353 ~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G-----ADIn~kn~~-G~TPLh~y~~~a~n~~~~dIvklLis~~  426 (764)
T PHA02716        353 NTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG-----ADITAVNCL-GYTPLTSYICTAQNYMYYDIIDCLISDK  426 (764)
T ss_pred             CCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC-----CCCCCcCCC-CCChHHHHHHHHHhcChHHHHHHHHhCc
Confidence            999999875              37899999999999     666777777 8888862        3468899999887


Q ss_pred             C
Q 002751          644 V  644 (885)
Q Consensus       644 a  644 (885)
                      +
T Consensus       427 ~  427 (764)
T PHA02716        427 V  427 (764)
T ss_pred             c
Confidence            5

>PHA03095 ankyrin-like protein; Provisional

Probab=99.72  E-value=5.9e-17  Score=188.04  Aligned_cols=165  Identities=18%  Similarity=0.140  Sum_probs=133.9

Q ss_pred             ccCCCCcccCHHHHHHH----HHh--HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC-ChhhHHHHHhCCCCCCccC
Q 002751          471 IEGDCPNSRDKLIQNLL----RNR--LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG-YEWAMRPIIATGVSPNFRD  543 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL----~~~--l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G-~~~iV~~LL~~Gadin~~D  543 (885)
                      ..|.++|..+..+.++|    ...  ....+++.|++.|+++|.+|..|.||||+|+..| +.+++++|+++|+++|.+|
T Consensus        35 ~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~  114 (471)
T PHA03095         35 AAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD  114 (471)
T ss_pred             HcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCC
Confidence            45677777766655555    322  2566788999999999999999999999999999 5999999999999999999


Q ss_pred             CCCCCHHHHHH--HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC--cHHHHHHHHHcCCCCCCcCCccc
Q 002751          544 ARGRTALHWAS--YFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG--HKGIAGYLAEADLSSHLSSLTVN  619 (885)
Q Consensus       544 ~~G~TPLH~Aa--~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G--~~eiv~lLLe~Ga~~~~~~ln~~  619 (885)
                      ..|+||||+|+  ..++.+++++|+++|++++..+      ..|.||||+|+..+  +.+++++|+++|++.     +..
T Consensus       115 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d------~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~-----~~~  183 (471)
T PHA03095        115 KVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALD------LYGMTPLAVLLKSRNANVELLRLLIDAGADV-----YAV  183 (471)
T ss_pred             CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccC------CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC-----ccc
Confidence            99999999999  5678999999999999998877      69999999988766  678999999999544     334


Q ss_pred             cCcchhHHHHHh------hHHHHHHHHHcCC-CCC
Q 002751          620 ENGMDNVAAALA------AEKANETAAQIGV-QSD  647 (885)
Q Consensus       620 d~~~g~tAa~~~------~~~~ve~Ll~~~a-~~~  647 (885)
                      +.. |.++++.+      ...+++.|++.++ ++.
T Consensus       184 d~~-g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~  217 (471)
T PHA03095        184 DDR-FRSLLHHHLQSFKPRARIVRELIRAGCDPAA  217 (471)
T ss_pred             CCC-CCCHHHHHHHHCCCcHHHHHHHHHcCCCCcc
Confidence            444 66666543      4577888888887 443

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.72  E-value=5.2e-17  Score=163.70  Aligned_cols=115  Identities=22%  Similarity=0.192  Sum_probs=103.5

Q ss_pred             HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhh---HHHHHhCCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHH-c
Q 002751          494 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWA---MRPIIATGVSPNFRD-ARGRTALHWASYFGREETVIMLVK-L  568 (885)
Q Consensus       494 ~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~i---V~~LL~~Gadin~~D-~~G~TPLH~Aa~~G~~eiV~~LL~-~  568 (885)
                      .+++.|++.|++++.+|..|+||||+||..|+.+.   +++|+..|+++|.+| ..|.||||+|+..|+.+++++|+. .
T Consensus        38 ~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~  117 (166)
T PHA02743         38 EVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQL  117 (166)
T ss_pred             HHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcc
Confidence            45566788999999999999999999999998765   789999999999998 589999999999999999999995 7


Q ss_pred             CCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCc
Q 002751          569 GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLS  614 (885)
Q Consensus       569 GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~  614 (885)
                      |++++.++      ..|.||||+|+..|+.+++++|+++|++.+..
T Consensus       118 gad~~~~d------~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  157 (166)
T PHA02743        118 GVNLGAIN------YQHETAYHIAYKMRDRRMMEILRANGAVCDDP  157 (166)
T ss_pred             CCCccCcC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence            99998877      79999999999999999999999999555443

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.71  E-value=7.6e-17  Score=187.71  Aligned_cols=163  Identities=18%  Similarity=0.173  Sum_probs=134.4

Q ss_pred             cccCCCCcccCHHHHHHHH-----HhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--ChhhHHHHHhCCCCCCcc
Q 002751          470 AIEGDCPNSRDKLIQNLLR-----NRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG--YEWAMRPIIATGVSPNFR  542 (885)
Q Consensus       470 ~~~~~~in~~d~l~~~aL~-----~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G--~~~iV~~LL~~Gadin~~  542 (885)
                      ...|++++..+..+.++|.     ......+++.|++.|++++..|..|.||||+|+..|  +.+++++|+++|+++|.+
T Consensus        93 l~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~  172 (480)
T PHA03100         93 LEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAK  172 (480)
T ss_pred             HHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccc
Confidence            3456777666655444443     223566788899999999999999999999999999  899999999999999999


Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC------CcHHHHHHhcCc--HHHHHHHHHcCCCCCCc
Q 002751          543 DARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGG------QTAADLASSRGH--KGIAGYLAEADLSSHLS  614 (885)
Q Consensus       543 D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G------~TPLhlAa~~G~--~eiv~lLLe~Ga~~~~~  614 (885)
                      |..|.||||+|+..|+.+++++|+++|++++..+      ..|      .||||+|+..|+  .+++++|+++|+     
T Consensus       173 d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~------~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~-----  241 (480)
T PHA03100        173 NRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGD------IETLLFTIFETPLHIAACYNEITLEVVNYLLSYGV-----  241 (480)
T ss_pred             cCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCC------CCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCC-----
Confidence            9999999999999999999999999999998776      467      899999999999  999999999994     


Q ss_pred             CCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751          615 SLTVNENGMDNVAAAL----AAEKANETAAQIGV  644 (885)
Q Consensus       615 ~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a  644 (885)
                      +++..+.. |.+|++.    +..++++.|++.++
T Consensus       242 din~~d~~-g~TpL~~A~~~~~~~iv~~Ll~~ga  274 (480)
T PHA03100        242 PINIKDVY-GFTPLHYAVYNNNPEFVKYLLDLGA  274 (480)
T ss_pred             CCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            44555554 6655544    46789999999998

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.71  E-value=1.1e-16  Score=183.03  Aligned_cols=161  Identities=17%  Similarity=0.091  Sum_probs=133.6

Q ss_pred             ccCCCCcccCHHHHHHH----HHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCC-ccCCC
Q 002751          471 IEGDCPNSRDKLIQNLL----RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN-FRDAR  545 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL----~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin-~~D~~  545 (885)
                      ..|.++|..+..+.++|    ... ...+++.|++.|++++..+..|.||||+|+..|+.+++++|++.|++++ ..+..
T Consensus        23 ~~g~~~n~~~~~g~tpL~~A~~~~-~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~  101 (413)
T PHA02875         23 DIGINPNFEIYDGISPIKLAMKFR-DSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKD  101 (413)
T ss_pred             HCCCCCCccCCCCCCHHHHHHHcC-CHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCC
Confidence            34556655554444444    332 3446788999999999999999999999999999999999999998775 45778


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh
Q 002751          546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN  625 (885)
Q Consensus       546 G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~  625 (885)
                      |+||||+|+..|+.+++++|+++|++++..+      ..|.||||+|+..|+.+++++|+++|+     +++.++.. |.
T Consensus       102 g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~------~~g~tpLh~A~~~~~~~~v~~Ll~~g~-----~~~~~d~~-g~  169 (413)
T PHA02875        102 GMTPLHLATILKKLDIMKLLIARGADPDIPN------TDKFSPLHLAVMMGDIKGIELLIDHKA-----CLDIEDCC-GC  169 (413)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHhcCC-----CCCCCCCC-CC
Confidence            9999999999999999999999999998877      699999999999999999999999994     55555655 66


Q ss_pred             HHHH----HhhHHHHHHHHHcCC
Q 002751          626 VAAA----LAAEKANETAAQIGV  644 (885)
Q Consensus       626 tAa~----~~~~~~ve~Ll~~~a  644 (885)
                      +|++    .+..++++.|++.|+
T Consensus       170 TpL~~A~~~g~~eiv~~Ll~~ga  192 (413)
T PHA02875        170 TPLIIAMAKGDIAICKMLLDSGA  192 (413)
T ss_pred             CHHHHHHHcCCHHHHHHHHhCCC
Confidence            5554    457899999999998

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.71  E-value=2e-16  Score=165.41  Aligned_cols=146  Identities=14%  Similarity=0.097  Sum_probs=118.5

Q ss_pred             HHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--ChhhHHHHHhCCCCCCccC-CCCCCHHHHHHHc---
Q 002751          483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG--YEWAMRPIIATGVSPNFRD-ARGRTALHWASYF---  556 (885)
Q Consensus       483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G--~~~iV~~LL~~Gadin~~D-~~G~TPLH~Aa~~---  556 (885)
                      ++.++... ...+++.|++.   +|..|..|.||||+|+..+  +.+++++|+++|+++|.++ ..|+||||+|+..   
T Consensus        25 L~~A~~~~-~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~  100 (209)
T PHA02859         25 LFYYVEKD-DIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKN  100 (209)
T ss_pred             HHHHHHhC-cHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCcc
Confidence            34444433 23345566654   5678899999999999854  8899999999999999997 4899999998864   


Q ss_pred             CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHh--cCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----
Q 002751          557 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASS--RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----  630 (885)
Q Consensus       557 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~--~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~----  630 (885)
                      ++.+++++|+++|++++.++      ..|.||||+|+.  .++.+++++|+++|     ++++.++.. |.++++.    
T Consensus       101 ~~~eiv~~Ll~~gadin~~d------~~G~TpLh~a~~~~~~~~~iv~~Li~~g-----adin~~d~~-g~t~Lh~~a~~  168 (209)
T PHA02859        101 VEPEILKILIDSGSSITEED------EDGKNLLHMYMCNFNVRINVIKLLIDSG-----VSFLNKDFD-NNNILYSYILF  168 (209)
T ss_pred             ccHHHHHHHHHCCCCCCCcC------CCCCCHHHHHHHhccCCHHHHHHHHHcC-----CCcccccCC-CCcHHHHHHHh
Confidence            57999999999999999887      799999999876  57899999999999     556666666 7776653    


Q ss_pred             -hhHHHHHHHHHcCC
Q 002751          631 -AAEKANETAAQIGV  644 (885)
Q Consensus       631 -~~~~~ve~Ll~~~a  644 (885)
                       +..++++.|++.++
T Consensus       169 ~~~~~iv~~Ll~~Ga  183 (209)
T PHA02859        169 HSDKKIFDFLTSLGI  183 (209)
T ss_pred             cCCHHHHHHHHHcCC
Confidence             35789999999998

>PHA03095 ankyrin-like protein; Provisional

Probab=99.71  E-value=1.5e-16  Score=184.68  Aligned_cols=140  Identities=17%  Similarity=0.146  Sum_probs=125.4

Q ss_pred             HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC---ChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcC-CHHHHHHHHHc
Q 002751          493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG---YEWAMRPIIATGVSPNFRDARGRTALHWASYFG-REETVIMLVKL  568 (885)
Q Consensus       493 e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G---~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G-~~eiV~~LL~~  568 (885)
                      ..+++.|++.|+++|..|..|.||||+|+..|   +.+++++|++.|+++|.+|..|+||||+|+..| +.+++++|+++
T Consensus        27 ~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~  106 (471)
T PHA03095         27 VEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKA  106 (471)
T ss_pred             HHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHc
Confidence            34577888999999999999999999999999   999999999999999999999999999999999 59999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCcHHHHHH--hcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh------hHHHHHHHH
Q 002751          569 GAAPGAVEDPTPAFPGGQTAADLAS--SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA------AEKANETAA  640 (885)
Q Consensus       569 GAd~n~~dd~~~~d~~G~TPLhlAa--~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~------~~~~ve~Ll  640 (885)
                      |++++..+      ..|.||||+|+  ..++.+++++|+++|     ++++..+.. |.+|++.+      ..++++.|+
T Consensus       107 ga~in~~~------~~g~tpLh~a~~~~~~~~~iv~~Ll~~g-----ad~~~~d~~-g~tpL~~a~~~~~~~~~iv~~Ll  174 (471)
T PHA03095        107 GADVNAKD------KVGRTPLHVYLSGFNINPKVIRLLLRKG-----ADVNALDLY-GMTPLAVLLKSRNANVELLRLLI  174 (471)
T ss_pred             CCCCCCCC------CCCCCHHHHHhhCCcCCHHHHHHHHHcC-----CCCCccCCC-CCCHHHHHHHcCCCCHHHHHHHH
Confidence            99999887      68999999999  667899999999999     555666666 77777643      468899999


Q ss_pred             HcCC
Q 002751          641 QIGV  644 (885)
Q Consensus       641 ~~~a  644 (885)
                      +.++
T Consensus       175 ~~g~  178 (471)
T PHA03095        175 DAGA  178 (471)
T ss_pred             HcCC
Confidence            9997

>PHA02946 ankyin-like protein; Provisional

Probab=99.69  E-value=1.1e-16  Score=185.36  Aligned_cols=161  Identities=14%  Similarity=0.081  Sum_probs=124.6

Q ss_pred             cccCCCCcccCHHHHHHHHHh---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC--hhhHHHHHhCCCCCCc-cC
Q 002751          470 AIEGDCPNSRDKLIQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY--EWAMRPIIATGVSPNF-RD  543 (885)
Q Consensus       470 ~~~~~~in~~d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~--~~iV~~LL~~Gadin~-~D  543 (885)
                      +..|.++|.++..+.++|+..   ....+++.|+++|+++|.+|..|.||||+|+..++  .+++++|+++|+++|. .|
T Consensus        59 l~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d  138 (446)
T PHA02946         59 LHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVD  138 (446)
T ss_pred             HHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccC
Confidence            456788888777766666422   24567788889999999999999999999887664  6788999999999985 68


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC--cHHHHHHHHHcCCCCCCcCCccccC
Q 002751          544 ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG--HKGIAGYLAEADLSSHLSSLTVNEN  621 (885)
Q Consensus       544 ~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G--~~eiv~lLLe~Ga~~~~~~ln~~d~  621 (885)
                      ..|.|||| ||..|+.+++++|++.|++++..+      ..|+||||+|+..+  +.+++++|+++|     ++++.++.
T Consensus       139 ~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d------~~G~t~Lh~A~~~~~~~~~~v~~Ll~~G-----adin~~d~  206 (446)
T PHA02946        139 EEGCGPLL-ACTDPSERVFKKIMSIGFEARIVD------KFGKNHIHRHLMSDNPKASTISWMMKLG-----ISPSKPDH  206 (446)
T ss_pred             CCCCcHHH-HHHCCChHHHHHHHhccccccccC------CCCCCHHHHHHHhcCCCHHHHHHHHHcC-----CCCcccCC
Confidence            88999997 667788899999999998888777      68888888887644  467888888888     56666666


Q ss_pred             cchhHHHHHhh------HHHHHHHHHcCC
Q 002751          622 GMDNVAAALAA------EKANETAAQIGV  644 (885)
Q Consensus       622 ~~g~tAa~~~~------~~~ve~Ll~~~a  644 (885)
                      . |.||++++.      .++++.|+. ++
T Consensus       207 ~-G~TpLH~Aa~~~~~~~~iv~lLl~-ga  233 (446)
T PHA02946        207 D-GNTPLHIVCSKTVKNVDIINLLLP-ST  233 (446)
T ss_pred             C-CCCHHHHHHHcCCCcHHHHHHHHc-CC
Confidence            6 777777654      356677764 55

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.69  E-value=4.4e-17  Score=179.58  Aligned_cols=143  Identities=19%  Similarity=0.128  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002751          491 LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGA  570 (885)
Q Consensus       491 l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GA  570 (885)
                      .+-.+|+.|+++|+++|.......|||--||.-|+.++|++|+++|+|++..|+.|.|.||+||+.||.+|+++|++.||
T Consensus        95 GHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gA  174 (615)
T KOG0508|consen   95 GHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGA  174 (615)
T ss_pred             CcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCC
Confidence            35567899999999999988889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHc
Q 002751          571 APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQI  642 (885)
Q Consensus       571 d~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~  642 (885)
                      |+|.++      ..|.|+||.|++.|+.+|+++|+.+|+......   ..-.+...|+..|+.++|+.|++.
T Consensus       175 Dvn~ks------~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~---~GmtPL~~Aa~tG~~~iVe~L~~~  237 (615)
T KOG0508|consen  175 DVNAKS------YKGNTALHDCAESGSVDIVQLLLKHGAKIDVDG---HGMTPLLLAAVTGHTDIVERLLQC  237 (615)
T ss_pred             Ccchhc------ccCchHHHhhhhcccHHHHHHHHhCCceeeecC---CCCchHHHHhhhcchHHHHHHhcC
Confidence            999988      799999999999999999999999994432221   122224456677888999999863

>PHA02798 ankyrin-like protein; Provisional

Probab=99.68  E-value=2e-16  Score=185.40  Aligned_cols=142  Identities=15%  Similarity=0.114  Sum_probs=122.2

Q ss_pred             HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHc-----CChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcC---CHHHHH
Q 002751          492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAAL-----GYEWAMRPIIATGVSPNFRDARGRTALHWASYFG---REETVI  563 (885)
Q Consensus       492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~-----G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G---~~eiV~  563 (885)
                      ...+++.|+++|+++|.+|..|.||||+|+..     ++.+++++|+++|+|+|.+|..|+||||+|+..|   +.++++
T Consensus        50 ~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~  129 (489)
T PHA02798         50 STDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILL  129 (489)
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHH
Confidence            45678889999999999999999999998764     6789999999999999999999999999999976   789999


Q ss_pred             HHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCc---HHHHHHHHHcCCCCCCcCCccccCcchhHHHHH--------hh
Q 002751          564 MLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGH---KGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL--------AA  632 (885)
Q Consensus       564 ~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~---~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~--------~~  632 (885)
                      +|+++||+++..+      ..|.||||+|+..|+   .+++++|+++|++     ++..+...|.++.+.        +.
T Consensus       130 ~Ll~~Gadvn~~d------~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad-----in~~~~~~~~t~Lh~~~~~~~~~~~  198 (489)
T PHA02798        130 FMIENGADTTLLD------KDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD-----INTHNNKEKYDTLHCYFKYNIDRID  198 (489)
T ss_pred             HHHHcCCCccccC------CCCCcHHHHHHHcCCcchHHHHHHHHHhCCC-----cccccCcCCCcHHHHHHHhccccCC
Confidence            9999999999887      799999999999998   9999999999955     444432214455442        25


Q ss_pred             HHHHHHHHHcCC
Q 002751          633 EKANETAAQIGV  644 (885)
Q Consensus       633 ~~~ve~Ll~~~a  644 (885)
                      .++++.|++.|+
T Consensus       199 ~~ivk~Li~~Ga  210 (489)
T PHA02798        199 ADILKLFVDNGF  210 (489)
T ss_pred             HHHHHHHHHCCC
Confidence            789999999998

>PHA02795 ankyrin-like protein; Provisional

Probab=99.68  E-value=3.6e-16  Score=177.74  Aligned_cols=162  Identities=12%  Similarity=-0.008  Sum_probs=131.5

Q ss_pred             ccccCCCCc------ccCHHHHHHHHHh-----HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCC
Q 002751          469 MAIEGDCPN------SRDKLIQNLLRNR-----LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGV  537 (885)
Q Consensus       469 ~~~~~~~in------~~d~l~~~aL~~~-----l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Ga  537 (885)
                      +.+++.++|      .++...+++|...     ....+++.|+++|+++|..  .+.||||+|+..|+.+++++|+.+|+
T Consensus        96 l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga  173 (437)
T PHA02795         96 LVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGI  173 (437)
T ss_pred             HHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCC
Confidence            345666655      3444455555332     3466889999999999985  45899999999999999999999998


Q ss_pred             CCCccC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCC
Q 002751          538 SPNFRD------ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSS  611 (885)
Q Consensus       538 din~~D------~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~  611 (885)
                      +++...      ..|.||+|.|+..++.+++++|+++||++|.++      ..|.||||+|+..|+.+++++|+++|   
T Consensus       174 ~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD------~~G~TpLh~Aa~~g~~eiVelLL~~G---  244 (437)
T PHA02795        174 PDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLD------AGGRTLLYRAIYAGYIDLVSWLLENG---  244 (437)
T ss_pred             cccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCC------CCCCCHHHHHHHcCCHHHHHHHHHCC---
Confidence            543322      348899999999999999999999999999887      79999999999999999999999999   


Q ss_pred             CCcCCccccCcchhHHHHHhh------------HHHHHHHHHcCC
Q 002751          612 HLSSLTVNENGMDNVAAALAA------------EKANETAAQIGV  644 (885)
Q Consensus       612 ~~~~ln~~d~~~g~tAa~~~~------------~~~ve~Ll~~~a  644 (885)
                        ++++.++.. |.||++.+.            .++++.|+++++
T Consensus       245 --AdIN~~d~~-G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ga  286 (437)
T PHA02795        245 --ANVNAVMSN-GYTCLDVAVDRGSVIARRETHLKILEILLREPL  286 (437)
T ss_pred             --CCCCCcCCC-CCCHHHHHHHcCCcccccccHHHHHHHHHhCCC
Confidence              666666666 777776653            479999999987

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.68  E-value=3.6e-16  Score=190.39  Aligned_cols=162  Identities=17%  Similarity=0.132  Sum_probs=117.0

Q ss_pred             ccCCCCcccCHHHHHHHHHh----HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCC
Q 002751          471 IEGDCPNSRDKLIQNLLRNR----LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARG  546 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL~~~----l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G  546 (885)
                      ..|.+++..+..+.++|...    ....++..|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..|
T Consensus       329 ~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g  408 (682)
T PHA02876        329 MLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKI  408 (682)
T ss_pred             HcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCC
Confidence            45666666666555555332    23456677778888888888888888888888888888888888888888888888


Q ss_pred             CCHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC-cHHHHHHHHHcCCCCCCcCCccccCcch
Q 002751          547 RTALHWASYFGR-EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG-HKGIAGYLAEADLSSHLSSLTVNENGMD  624 (885)
Q Consensus       547 ~TPLH~Aa~~G~-~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G-~~eiv~lLLe~Ga~~~~~~ln~~d~~~g  624 (885)
                      .||||+|+..++ ..++++|++.|++++.++      ..|+||||+|+..| +.+++++|++.|     ++++..+.. |
T Consensus       409 ~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d------~~G~TpLh~Aa~~~~~~~iv~lLl~~G-----ad~n~~d~~-g  476 (682)
T PHA02876        409 GTALHFALCGTNPYMSVKTLIDRGANVNSKN------KDLSTPLHYACKKNCKLDVIEMLLDNG-----ADVNAINIQ-N  476 (682)
T ss_pred             CchHHHHHHcCCHHHHHHHHHhCCCCCCcCC------CCCChHHHHHHHhCCcHHHHHHHHHCC-----CCCCCCCCC-C
Confidence            888888876555 456788888888887776      68888888888765 578888888888     555666665 6


Q ss_pred             hHHHHHhh--HHHHHHHHHcCC
Q 002751          625 NVAAALAA--EKANETAAQIGV  644 (885)
Q Consensus       625 ~tAa~~~~--~~~ve~Ll~~~a  644 (885)
                      .+|+..+.  ...++.|+..++
T Consensus       477 ~tpl~~a~~~~~~v~~Ll~~~a  498 (682)
T PHA02876        477 QYPLLIALEYHGIVNILLHYGA  498 (682)
T ss_pred             CCHHHHHHHhCCHHHHHHHCCC
Confidence            66665432  356777777775

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.68  E-value=3.8e-16  Score=193.76  Aligned_cols=147  Identities=17%  Similarity=0.181  Sum_probs=125.6

Q ss_pred             HHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHH
Q 002751          483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV  562 (885)
Q Consensus       483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV  562 (885)
                      ++.+.... ...+++.|++.|+++|..|..|+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++
T Consensus       529 L~~Aa~~g-~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv  607 (823)
T PLN03192        529 LLTVASTG-NAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIF  607 (823)
T ss_pred             HHHHHHcC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence            34444333 34567888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----hhHHHHHH
Q 002751          563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANET  638 (885)
Q Consensus       563 ~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~  638 (885)
                      ++|+..++..+.        ..|.+|||+|+.+|+.+++++|+++|+     +++.+|.. |.+|++.    ++.++++.
T Consensus       608 ~~L~~~~~~~~~--------~~~~~~L~~Aa~~g~~~~v~~Ll~~Ga-----din~~d~~-G~TpLh~A~~~g~~~iv~~  673 (823)
T PLN03192        608 RILYHFASISDP--------HAAGDLLCTAAKRNDLTAMKELLKQGL-----NVDSEDHQ-GATALQVAMAEDHVDMVRL  673 (823)
T ss_pred             HHHHhcCcccCc--------ccCchHHHHHHHhCCHHHHHHHHHCCC-----CCCCCCCC-CCCHHHHHHHCCcHHHHHH
Confidence            999988876542        367799999999999999999999994     45555555 6655554    56899999


Q ss_pred             HHHcCC
Q 002751          639 AAQIGV  644 (885)
Q Consensus       639 Ll~~~a  644 (885)
                      |++.++
T Consensus       674 Ll~~GA  679 (823)
T PLN03192        674 LIMNGA  679 (823)
T ss_pred             HHHcCC
Confidence            999998

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.66  E-value=2.8e-16  Score=159.06  Aligned_cols=160  Identities=17%  Similarity=0.084  Sum_probs=124.0

Q ss_pred             ccCCCCcccCHHHHHHHHHhHHHHHHH-HHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCH
Q 002751          471 IEGDCPNSRDKLIQNLLRNRLCEWLVW-KIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTA  549 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL~~~l~e~Lv~-~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TP  549 (885)
                      .++...|..+...-.++.-.+++.-+. .++.....+|..|+.|.|||.||+..|+.++|++||..|++++...+...|+
T Consensus       117 tN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resA  196 (296)
T KOG0502|consen  117 TNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESA  196 (296)
T ss_pred             cccccCCccccccCChhhHHHHHHHHHHHHHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhh
Confidence            344444444444334443333333222 2223456789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh----
Q 002751          550 LHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----  625 (885)
Q Consensus       550 LH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~----  625 (885)
                      |++|+..|..++|++||.++.|+|..|      .+|-|||-+|++.||.+|++.|++.|     ++++..+.. |.    
T Consensus       197 LsLAt~ggytdiV~lLL~r~vdVNvyD------wNGgTpLlyAvrgnhvkcve~Ll~sG-----Ad~t~e~ds-Gy~~md  264 (296)
T KOG0502|consen  197 LSLATRGGYTDIVELLLTREVDVNVYD------WNGGTPLLYAVRGNHVKCVESLLNSG-----ADVTQEDDS-GYWIMD  264 (296)
T ss_pred             HhHHhcCChHHHHHHHHhcCCCcceec------cCCCceeeeeecCChHHHHHHHHhcC-----CCccccccc-CCcHHH
Confidence            999999999999999999999999988      79999999999999999999999999     555555544 55    


Q ss_pred             HHHHHhhHHHHHHHHHcC
Q 002751          626 VAAALAAEKANETAAQIG  643 (885)
Q Consensus       626 tAa~~~~~~~ve~Ll~~~  643 (885)
                      .|...|.. .|+.+++.-
T Consensus       265 lAValGyr-~Vqqvie~h  281 (296)
T KOG0502|consen  265 LAVALGYR-IVQQVIEKH  281 (296)
T ss_pred             HHHHhhhH-HHHHHHHHH
Confidence            44444444 666666554

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.66  E-value=5.9e-16  Score=156.02  Aligned_cols=132  Identities=21%  Similarity=0.223  Sum_probs=113.3

Q ss_pred             CCCCCCccCCCCCcHHHHHHHcCCh----hhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHH---HHHHHHcCCCCCC
Q 002751          502 GGKGPNVIDDGGQGVVHLAAALGYE----WAMRPIIATGVSPNFRDARGRTALHWASYFGREET---VIMLVKLGAAPGA  574 (885)
Q Consensus       502 ~Gadin~~D~~G~TpLH~AA~~G~~----~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~ei---V~~LL~~GAd~n~  574 (885)
                      +|++++..+..+.++||+||..|+.    +++++|++.|++++.+|..|+|||||||.+|+.++   +++|+..|++++.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            5778888999999999999999998    66678889999999999999999999999998764   7999999999998


Q ss_pred             CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH-cCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751          575 VEDPTPAFPGGQTAADLASSRGHKGIAGYLAE-ADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV  644 (885)
Q Consensus       575 ~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe-~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a  644 (885)
                      ++.     ..|.||||+|+..|+.+++++|++ .|     .+++..+.. |.+|+..    +..++++.|++.++
T Consensus        89 ~d~-----~~g~TpLh~A~~~g~~~iv~~Ll~~~g-----ad~~~~d~~-g~tpL~~A~~~~~~~iv~~Ll~~ga  152 (166)
T PHA02743         89 REL-----GTGNTLLHIAASTKNYELAEWLCRQLG-----VNLGAINYQ-HETAYHIAYKMRDRRMMEILRANGA  152 (166)
T ss_pred             CCC-----CCCCcHHHHHHHhCCHHHHHHHHhccC-----CCccCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            762     479999999999999999999995 78     455555555 6666555    45789999999998

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.7e-16  Score=165.68  Aligned_cols=128  Identities=24%  Similarity=0.227  Sum_probs=117.5

Q ss_pred             CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 002751          503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAF  582 (885)
Q Consensus       503 Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d  582 (885)
                      .-|.|.-|..|.+||||||..|+..+|+.||..|+.+|..+....||||+||.+||.++|..||++.+|+|+++      
T Consensus        24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavn------   97 (448)
T KOG0195|consen   24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVN------   97 (448)
T ss_pred             ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhh------
Confidence            45778889999999999999999999999999999999999999999999999999999999999999999998      


Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHc
Q 002751          583 PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQI  642 (885)
Q Consensus       583 ~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~  642 (885)
                      ..|.|||||||..|+..|++-|+..|     +.+++.++. |.+|++.+.....+.|++.
T Consensus        98 ehgntplhyacfwgydqiaedli~~g-----a~v~icnk~-g~tpldkakp~l~~~l~e~  151 (448)
T KOG0195|consen   98 EHGNTPLHYACFWGYDQIAEDLISCG-----AAVNICNKK-GMTPLDKAKPMLKNTLLEI  151 (448)
T ss_pred             ccCCCchhhhhhhcHHHHHHHHHhcc-----ceeeecccC-CCCchhhhchHHHHHHHHH
Confidence            69999999999999999999999999     666777777 9999998877766666654

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.66  E-value=1.1e-15  Score=186.04  Aligned_cols=161  Identities=25%  Similarity=0.190  Sum_probs=98.1

Q ss_pred             cCCCCcccCHHHHHHH----HHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC-ChhhHHHHHhCCCCCCccCCCC
Q 002751          472 EGDCPNSRDKLIQNLL----RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG-YEWAMRPIIATGVSPNFRDARG  546 (885)
Q Consensus       472 ~~~~in~~d~l~~~aL----~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G-~~~iV~~LL~~Gadin~~D~~G  546 (885)
                      .|.++|..+..+.++|    .......+++.|++.|+++|..|..|.||||+|+..| ..+++++|+..|+++|.+|..|
T Consensus       262 ~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g  341 (682)
T PHA02876        262 AGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLY  341 (682)
T ss_pred             CCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCC
Confidence            3444544444333333    2222334566666777777777777777777777776 3666777777777777777777


Q ss_pred             CCHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh
Q 002751          547 RTALHWASYF-GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN  625 (885)
Q Consensus       547 ~TPLH~Aa~~-G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~  625 (885)
                      +||||+|+.. ++.+++.+|++.|++++.++      ..|.||||+|+..|+.+++++|+++|++     ++..+.. |.
T Consensus       342 ~TpLh~A~~~~~~~~iv~lLl~~gadin~~d------~~G~TpLh~Aa~~~~~~iv~~Ll~~gad-----~~~~~~~-g~  409 (682)
T PHA02876        342 ITPLHQASTLDRNKDIVITLLELGANVNARD------YCDKTPIHYAAVRNNVVIINTLLDYGAD-----IEALSQK-IG  409 (682)
T ss_pred             CcHHHHHHHhCCcHHHHHHHHHcCCCCccCC------CCCCCHHHHHHHcCCHHHHHHHHHCCCC-----ccccCCC-CC
Confidence            7777777664 35666777777777766655      5677777777777777777777776633     3333333 44


Q ss_pred             HHHHHhh-----HHHHHHHHHcCC
Q 002751          626 VAAALAA-----EKANETAAQIGV  644 (885)
Q Consensus       626 tAa~~~~-----~~~ve~Ll~~~a  644 (885)
                      +|++.+.     ..+++.|++.++
T Consensus       410 T~Lh~A~~~~~~~~~vk~Ll~~ga  433 (682)
T PHA02876        410 TALHFALCGTNPYMSVKTLIDRGA  433 (682)
T ss_pred             chHHHHHHcCCHHHHHHHHHhCCC
Confidence            4444432     234555666555

>PHA02741 hypothetical protein; Provisional

Probab=99.64  E-value=1.1e-15  Score=154.31  Aligned_cols=127  Identities=22%  Similarity=0.212  Sum_probs=76.0

Q ss_pred             CccCCCCCcHHHHHHHcCChhhHHHHHh------CCCCCCccCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCCCC
Q 002751          507 NVIDDGGQGVVHLAAALGYEWAMRPIIA------TGVSPNFRDARGRTALHWASYFGR----EETVIMLVKLGAAPGAVE  576 (885)
Q Consensus       507 n~~D~~G~TpLH~AA~~G~~~iV~~LL~------~Gadin~~D~~G~TPLH~Aa~~G~----~eiV~~LL~~GAd~n~~d  576 (885)
                      +.+|..|.||||+||..|+.++++.|+.      .|++++.+|..|+||||+|+..|+    .+++++|+.+|++++.++
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~   94 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE   94 (169)
T ss_pred             hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence            3455666777777777777776666532      256666666667777777776666    356666666666666554


Q ss_pred             CCCCCCCCCCcHHHHHHhcCcHHHHHHHHH-cCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751          577 DPTPAFPGGQTAADLASSRGHKGIAGYLAE-ADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV  644 (885)
Q Consensus       577 d~~~~d~~G~TPLhlAa~~G~~eiv~lLLe-~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a  644 (885)
                      .     ..|+||||+|+..++.+++++|+. .|     .+++.++.. |.+|++.    +..++++.|++..+
T Consensus        95 ~-----~~g~TpLh~A~~~~~~~iv~~Ll~~~g-----~~~~~~n~~-g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         95 M-----LEGDTALHLAAHRRDHDLAEWLCCQPG-----IDLHFCNAD-NKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             c-----CCCCCHHHHHHHcCCHHHHHHHHhCCC-----CCCCcCCCC-CCCHHHHHHHCCCHHHHHHHHHHHH
Confidence            1     256677777777777777776665 35     333344443 4444443    33455555555543

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.64  E-value=2.3e-15  Score=164.89  Aligned_cols=149  Identities=13%  Similarity=0.038  Sum_probs=115.5

Q ss_pred             ccCHHHHHHHHHhHHHHHHHHHHhCCCCCCccC----CCCCcHHHHHHHcCChhhHHHHHhCCCCCCcc-CCCCCCHHHH
Q 002751          478 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVID----DGGQGVVHLAAALGYEWAMRPIIATGVSPNFR-DARGRTALHW  552 (885)
Q Consensus       478 ~~d~l~~~aL~~~l~e~Lv~~Lle~Gadin~~D----~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~-D~~G~TPLH~  552 (885)
                      ....+++.+.... ...+++.|+++|+++|.++    ..|.||||+|+..|+.+++++|+++|+++|.+ +..|.||||+
T Consensus        32 ~~~~lL~~A~~~~-~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~  110 (300)
T PHA02884         32 CIANILYSSIKFH-YTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYI  110 (300)
T ss_pred             CCCHHHHHHHHcC-CHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHH
Confidence            3445566666543 3456788889999999874    58999999999999999999999999999986 4579999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH-h
Q 002751          553 ASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL-A  631 (885)
Q Consensus       553 Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~-~  631 (885)
                      |+..|+.+++++|+..|++++.++      ..|.||||+|+..++..++.++...+.          +.. +.++... +
T Consensus       111 Aa~~~~~eivklLL~~GAdin~kd------~~G~TpL~~A~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~  173 (300)
T PHA02884        111 SVLHGCLKCLEILLSYGADINIQT------NDMVTPIELALMICNNFLAFMICDNEI----------SNF-YKHPKKILI  173 (300)
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHhCChhHHHHhcCCcc----------ccc-ccChhhhhc
Confidence            999999999999999999998877      689999999999888888866654321          111 2222221 3


Q ss_pred             hHHHHHHHHHcCC
Q 002751          632 AEKANETAAQIGV  644 (885)
Q Consensus       632 ~~~~ve~Ll~~~a  644 (885)
                      ..++++.|++++.
T Consensus       174 n~ei~~~Lish~v  186 (300)
T PHA02884        174 NFDILKILVSHFI  186 (300)
T ss_pred             cHHHHHHHHHHHH
Confidence            4678888888874

>PHA02741 hypothetical protein; Provisional

Probab=99.64  E-value=9.3e-16  Score=154.84  Aligned_cols=104  Identities=22%  Similarity=0.200  Sum_probs=95.9

Q ss_pred             hCCCCCCccCCCCCcHHHHHHHcCC----hhhHHHHHhCCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHH-cCCCCCC
Q 002751          501 EGGKGPNVIDDGGQGVVHLAAALGY----EWAMRPIIATGVSPNFRDA-RGRTALHWASYFGREETVIMLVK-LGAAPGA  574 (885)
Q Consensus       501 e~Gadin~~D~~G~TpLH~AA~~G~----~~iV~~LL~~Gadin~~D~-~G~TPLH~Aa~~G~~eiV~~LL~-~GAd~n~  574 (885)
                      ..|++++.+|..|+||||+|+..|+    .+++++|+.+|+++|.+|. .|+||||+|+..++.+++++|+. .|++++.
T Consensus        48 ~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~  127 (169)
T PHA02741         48 CHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF  127 (169)
T ss_pred             hhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc
Confidence            3478899999999999999999999    5889999999999999985 89999999999999999999997 5999988


Q ss_pred             CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCC
Q 002751          575 VEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLS  610 (885)
Q Consensus       575 ~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~  610 (885)
                      .+      ..|+||||+|+..|+.+++++|++.++.
T Consensus       128 ~n------~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741        128 CN------ADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CC------CCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            77      7999999999999999999999998743

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.63  E-value=1.9e-15  Score=148.22  Aligned_cols=126  Identities=21%  Similarity=0.162  Sum_probs=104.9

Q ss_pred             HHHHHhCC-CCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002751          496 VWKIHEGG-KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGA  574 (885)
Q Consensus       496 v~~Lle~G-adin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~  574 (885)
                      |+.|++.. -.+|.+|.+|.||||-|++.||.++|..|+..|++++++...||||||-||...+.+|+.+||++|||+|+
T Consensus        79 V~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA  158 (228)
T KOG0512|consen   79 VQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNA  158 (228)
T ss_pred             HHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccc
Confidence            45555544 45899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHhcCcH-HHHHHHHH-cCCCCCCcCCccccCcchhHHHHHhhH
Q 002751          575 VEDPTPAFPGGQTAADLASSRGHK-GIAGYLAE-ADLSSHLSSLTVNENGMDNVAAALAAE  633 (885)
Q Consensus       575 ~dd~~~~d~~G~TPLhlAa~~G~~-eiv~lLLe-~Ga~~~~~~ln~~d~~~g~tAa~~~~~  633 (885)
                      ..      ....||||+|+.+.+. ..+.+|+. .+     .....+++. +.+|..++..
T Consensus       159 ~t------~g~ltpLhlaa~~rn~r~t~~~Ll~dry-----i~pg~~nn~-eeta~~iARR  207 (228)
T KOG0512|consen  159 QT------KGLLTPLHLAAGNRNSRDTLELLLHDRY-----IHPGLKNNL-EETAFDIARR  207 (228)
T ss_pred             cc------cccchhhHHhhcccchHHHHHHHhhccc-----cChhhhcCc-cchHHHHHHH
Confidence            98      4779999999987664 45666654 33     233344554 6788887654

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.63  E-value=6.4e-16  Score=191.80  Aligned_cols=136  Identities=15%  Similarity=0.046  Sum_probs=119.2

Q ss_pred             ccCCCCcccCHHHHHHHH---HhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCC
Q 002751          471 IEGDCPNSRDKLIQNLLR---NRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR  547 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL~---~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~  547 (885)
                      ..|.++|..|..+.++|+   ...+..+++.|+++|+++|.+|.+|.||||+|+..|+.+++++|+..++..+.  ..|.
T Consensus       546 ~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~  623 (823)
T PLN03192        546 KAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAG  623 (823)
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCc
Confidence            567888888877777763   23457788899999999999999999999999999999999999998877653  4577


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCc
Q 002751          548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLS  614 (885)
Q Consensus       548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~  614 (885)
                      +|||+||..|+.+++++|+++|+++|.+|      .+|+||||+|+..|+.+++++|+++|++++..
T Consensus       624 ~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d------~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~  684 (823)
T PLN03192        624 DLLCTAAKRNDLTAMKELLKQGLNVDSED------HQGATALQVAMAEDHVDMVRLLIMNGADVDKA  684 (823)
T ss_pred             hHHHHHHHhCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCC
Confidence            99999999999999999999999999887      79999999999999999999999999554433

>PHA02917 ankyrin-like protein; Provisional

Probab=99.63  E-value=3e-15  Score=180.67  Aligned_cols=123  Identities=7%  Similarity=-0.059  Sum_probs=94.8

Q ss_pred             cHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCCCCCCCCC--------CCCCC
Q 002751          515 GVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS--YFGREETVIMLVKLGAAPGAVEDPT--------PAFPG  584 (885)
Q Consensus       515 TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa--~~G~~eiV~~LL~~GAd~n~~dd~~--------~~d~~  584 (885)
                      +++|+|+..|+.++|++|+++|+++|.+|..|+||||+|+  ..|+.+++++|+++||+++..+.-.        .....
T Consensus       105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~  184 (661)
T PHA02917        105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRN  184 (661)
T ss_pred             hHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccc
Confidence            3444455555678899999999999999999999999654  4789999999999999998654200        01123


Q ss_pred             CCcHHHHHHh-----------cCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh------HHHHHHHHHcCC
Q 002751          585 GQTAADLASS-----------RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA------EKANETAAQIGV  644 (885)
Q Consensus       585 G~TPLhlAa~-----------~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~------~~~ve~Ll~~~a  644 (885)
                      +.||||+|+.           +|+.+++++|+++|     ++++.++.. |.+|++.+.      .++|+.|++ ++
T Consensus       185 ~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~G-----advn~~d~~-G~TpLh~A~~~g~~~~eivk~Li~-g~  254 (661)
T PHA02917        185 CGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHG-----IKPSSIDKN-YCTALQYYIKSSHIDIDIVKLLMK-GI  254 (661)
T ss_pred             cccHHHHHHhhcccccccccccCcHHHHHHHHHCC-----CCcccCCCC-CCcHHHHHHHcCCCcHHHHHHHHh-CC
Confidence            3699999986           56899999999999     667777776 777776654      379999976 65

>PHA02795 ankyrin-like protein; Provisional

Probab=99.62  E-value=3.1e-15  Score=170.17  Aligned_cols=169  Identities=8%  Similarity=-0.148  Sum_probs=136.0

Q ss_pred             cccCCCCcccCHHHHHHHHHhHHHHHHHHHHhCCCCCC------ccCCCCCcHHHHHHH--cCChhhHHHHHhCCCCCCc
Q 002751          470 AIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPN------VIDDGGQGVVHLAAA--LGYEWAMRPIIATGVSPNF  541 (885)
Q Consensus       470 ~~~~~~in~~d~l~~~aL~~~l~e~Lv~~Lle~Gadin------~~D~~G~TpLH~AA~--~G~~~iV~~LL~~Gadin~  541 (885)
                      ..+|.++|.+....  .+....+..++++|+.+|+++|      .++..++|+||+++.  .|+.++|++|+++||++|.
T Consensus        69 ~~~~~~i~~~~~~~--~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~  146 (437)
T PHA02795         69 RIHRDNIDQYIVDR--LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK  146 (437)
T ss_pred             HHcCcchhhhhhhh--HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC
Confidence            46777887666555  3344456778899999999999      788999999999999  8999999999999999998


Q ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccC
Q 002751          542 RDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNEN  621 (885)
Q Consensus       542 ~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~  621 (885)
                      .+  +.||||+|+..|+.+++++|+++|++.....+....+..|.||+|.|+.+++.+++++|+++|     ++++.++.
T Consensus       147 ~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G-----ADIN~kD~  219 (437)
T PHA02795        147 IE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI-----EDINQLDA  219 (437)
T ss_pred             CC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCc-----CCcCcCCC
Confidence            54  589999999999999999999999854322211112245889999999999999999999999     56666666


Q ss_pred             cchhHHHH----HhhHHHHHHHHHcCC-CCCC
Q 002751          622 GMDNVAAA----LAAEKANETAAQIGV-QSDG  648 (885)
Q Consensus       622 ~~g~tAa~----~~~~~~ve~Ll~~~a-~~~~  648 (885)
                      . |.+|+.    .++.++++.|++.|+ .+..
T Consensus       220 ~-G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~  250 (437)
T PHA02795        220 G-GRTLLYRAIYAGYIDLVSWLLENGANVNAV  250 (437)
T ss_pred             C-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence            6 676555    456899999999998 4443

>PHA02730 ankyrin-like protein; Provisional

Probab=99.62  E-value=3.4e-15  Score=177.20  Aligned_cols=142  Identities=13%  Similarity=0.032  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC----hhhHHHHHhCCC--CCCccCCCCCCHHHH---HHHcC----
Q 002751          491 LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY----EWAMRPIIATGV--SPNFRDARGRTALHW---ASYFG----  557 (885)
Q Consensus       491 l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~----~~iV~~LL~~Ga--din~~D~~G~TPLH~---Aa~~G----  557 (885)
                      +...+++.|+++|+++|.. ..|.||||+|+..++    .+++++|+++|+  ++|.+|..|.||||.   |...+    
T Consensus       357 v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~  435 (672)
T PHA02730        357 VSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYH  435 (672)
T ss_pred             CcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhcccccc
Confidence            4567889999999999985 799999999998885    799999999998  699999999999994   33332    


Q ss_pred             -----CHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh
Q 002751          558 -----REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA  632 (885)
Q Consensus       558 -----~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~  632 (885)
                           ..+++++|+.+||+++.+|      ..|.||||+|+..++.+++++|+++|     ++++..+...|.+|++.+.
T Consensus       436 ~~e~~~~~ivk~LIs~GADINakD------~~G~TPLh~Aa~~~~~eive~LI~~G-----AdIN~~d~~~g~TaL~~Aa  504 (672)
T PHA02730        436 CYETILIDVFDILSKYMDDIDMID------NENKTLLYYAVDVNNIQFARRLLEYG-----ASVNTTSRSIINTAIQKSS  504 (672)
T ss_pred             ccchhHHHHHHHHHhcccchhccC------CCCCCHHHHHHHhCCHHHHHHHHHCC-----CCCCCCCCcCCcCHHHHHH
Confidence                 2356999999999999988      69999999999999999999999999     5566666422778887763


Q ss_pred             ------HHHHHHHHHcCC
Q 002751          633 ------EKANETAAQIGV  644 (885)
Q Consensus       633 ------~~~ve~Ll~~~a  644 (885)
                            .++++.|+++++
T Consensus       505 ~~~~~~~eIv~~LLs~ga  522 (672)
T PHA02730        505 YRRENKTKLVDLLLSYHP  522 (672)
T ss_pred             HhhcCcHHHHHHHHHcCC
Confidence                  569999999996

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.62  E-value=1.8e-15  Score=175.99  Aligned_cols=131  Identities=24%  Similarity=0.247  Sum_probs=110.3

Q ss_pred             CCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCC
Q 002751          506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVK-LGAAPGAVEDPTPAFPG  584 (885)
Q Consensus       506 in~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~-~GAd~n~~dd~~~~d~~  584 (885)
                      +|..|.+|.||||+||..|+.+++..|+..|+++|.++.++.||||.||.+|+.++|+-||+ .|...     .+..|..
T Consensus       266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rl-----lne~D~~  340 (929)
T KOG0510|consen  266 VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRL-----LNESDLH  340 (929)
T ss_pred             hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccc-----ccccccc
Confidence            35578999999999999999999999999999999999999999999999999999999999 44322     2335589


Q ss_pred             CCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchh----HHHHHhhHHHHHHHHHcCC
Q 002751          585 GQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAEKANETAAQIGV  644 (885)
Q Consensus       585 G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~----tAa~~~~~~~ve~Ll~~~a  644 (885)
                      |.||||+|+..||..++++|+..|+..+...  -.|.+ |.    +|+..++..+|+.|+.+|+
T Consensus       341 g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~--e~D~d-g~TaLH~Aa~~g~~~av~~Li~~Ga  401 (929)
T KOG0510|consen  341 GMTPLHLAAKSGHDRVVQLLLNKGALFLNMS--EADSD-GNTALHLAAKYGNTSAVQKLISHGA  401 (929)
T ss_pred             CCCchhhhhhcCHHHHHHHHHhcChhhhccc--ccccC-CchhhhHHHHhccHHHHHHHHHcCC
Confidence            9999999999999999999999996655210  12444 55    5555667899999999998

>PHA02917 ankyrin-like protein; Provisional

Probab=99.60  E-value=1e-14  Score=176.03  Aligned_cols=168  Identities=11%  Similarity=-0.008  Sum_probs=126.5

Q ss_pred             ccCCCCcccCHHHHHHHHH---h---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChh----hHHHHHhCCCCCC
Q 002751          471 IEGDCPNSRDKLIQNLLRN---R---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEW----AMRPIIATGVSPN  540 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL~~---~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~----iV~~LL~~Gadin  540 (885)
                      .++..++.+|..++++|+.   .   ....+++.|+++|++++.+|..|+||||+|+..|+.+    +++.|++.+..+|
T Consensus        20 ~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n   99 (661)
T PHA02917         20 RDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSN   99 (661)
T ss_pred             hccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCC
Confidence            3566667777777777764   2   2256788889999999999999999999999999854    5678887755455


Q ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH--HhcCcHHHHHHHHHcCCCCCCcCCcc
Q 002751          541 FRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA--SSRGHKGIAGYLAEADLSSHLSSLTV  618 (885)
Q Consensus       541 ~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA--a~~G~~eiv~lLLe~Ga~~~~~~ln~  618 (885)
                      ..|.  .+++|+|+..|+.++|++|+++|++++..+      ..|+||||+|  +.+|+.+++++|+++|++++..+..-
T Consensus       100 ~~~~--~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d------~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~  171 (661)
T PHA02917        100 INDF--NIFSYMKSKNVDVDLIKVLVEHGFDLSVKC------ENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDD  171 (661)
T ss_pred             CCCc--chHHHHHhhcCCHHHHHHHHHcCCCCCccC------CCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccc
Confidence            5443  367888889999999999999999999887      6999999954  45899999999999997665432110


Q ss_pred             ---------ccCcchhHHHHHh---------------hHHHHHHHHHcCC-CCC
Q 002751          619 ---------NENGMDNVAAALA---------------AEKANETAAQIGV-QSD  647 (885)
Q Consensus       619 ---------~d~~~g~tAa~~~---------------~~~~ve~Ll~~~a-~~~  647 (885)
                               .... +.++++.+               +.++|+.|++.|+ .+.
T Consensus       172 ~~g~~~~~~~~~~-~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~  224 (661)
T PHA02917        172 EYGYAYDDYQPRN-CGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS  224 (661)
T ss_pred             ccccccccccccc-cccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc
Confidence                     0111 34666554               4689999999998 444

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.59  E-value=3e-15  Score=183.81  Aligned_cols=133  Identities=20%  Similarity=0.226  Sum_probs=118.6

Q ss_pred             HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 002751          492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA  571 (885)
Q Consensus       492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd  571 (885)
                      ..-.++.++++|++++.++..|.||||.||..|+..+|++||++|+|++.+|..|+||||.||..|+.+|+.+|+++||+
T Consensus       519 ~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~  598 (1143)
T KOG4177|consen  519 TVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS  598 (1143)
T ss_pred             hHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCC
Confidence            44556788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751          572 PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA  631 (885)
Q Consensus       572 ~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~  631 (885)
                      +|..+      .+|.|||++|+..|+.+++++|+..+.++...+...++.. |.+|....
T Consensus       599 vna~d------~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~-g~~p~~v~  651 (1143)
T KOG4177|consen  599 VNAAD------LDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRK-GAVPEDVA  651 (1143)
T ss_pred             CCccc------ccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhc-ccChhhHH
Confidence            99988      7999999999999999999999999977633334455554 66665554

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.59  E-value=7.8e-15  Score=131.55  Aligned_cols=86  Identities=30%  Similarity=0.401  Sum_probs=79.6

Q ss_pred             HHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC
Q 002751          517 VHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG  596 (885)
Q Consensus       517 LH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G  596 (885)
                      ||+||..|+.+++++|++.|.+++.    |.||||+||..|+.+++++|++.|++++..+      ..|+||||+|+.+|
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~   70 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQD------KNGNTALHYAAENG   70 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BS------TTSSBHHHHHHHTT
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccC------CCCCCHHHHHHHcC
Confidence            7999999999999999999999887    8999999999999999999999999998887      79999999999999


Q ss_pred             cHHHHHHHHHcCCCCC
Q 002751          597 HKGIAGYLAEADLSSH  612 (885)
Q Consensus       597 ~~eiv~lLLe~Ga~~~  612 (885)
                      +.+++++|+++|++++
T Consensus        71 ~~~~~~~Ll~~g~~~~   86 (89)
T PF12796_consen   71 NLEIVKLLLEHGADVN   86 (89)
T ss_dssp             HHHHHHHHHHTTT-TT
T ss_pred             CHHHHHHHHHcCCCCC
Confidence            9999999999995443

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.59  E-value=3.9e-15  Score=164.34  Aligned_cols=140  Identities=24%  Similarity=0.228  Sum_probs=121.2

Q ss_pred             HHHHHHHHh-CCCCCCc--------cCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHH
Q 002751          493 EWLVWKIHE-GGKGPNV--------IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVI  563 (885)
Q Consensus       493 e~Lv~~Lle-~Gadin~--------~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~  563 (885)
                      -.++++|++ .++++..        ...+|-+||-.|+..||.++|+.|+.+|+++|.......|||--||.-||.++|+
T Consensus        55 ~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivK  134 (615)
T KOG0508|consen   55 ADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVK  134 (615)
T ss_pred             HHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHH
Confidence            334444444 4666543        2346899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh----hHHHHHHH
Q 002751          564 MLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----AEKANETA  639 (885)
Q Consensus       564 ~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~----~~~~ve~L  639 (885)
                      +|+++|||+++.+      ..|.|.|++|+..||.+|+++|++.|     +++|.++.. |+||++.|    +.++++.|
T Consensus       135 yLvE~gad~~Ian------rhGhTcLmIa~ykGh~~I~qyLle~g-----ADvn~ks~k-GNTALH~caEsG~vdivq~L  202 (615)
T KOG0508|consen  135 YLVEHGADPEIAN------RHGHTCLMIACYKGHVDIAQYLLEQG-----ADVNAKSYK-GNTALHDCAESGSVDIVQLL  202 (615)
T ss_pred             HHHHcCCCCcccc------cCCCeeEEeeeccCchHHHHHHHHhC-----CCcchhccc-CchHHHhhhhcccHHHHHHH
Confidence            9999999999888      89999999999999999999999999     677777776 88776554    68999999


Q ss_pred             HHcCC
Q 002751          640 AQIGV  644 (885)
Q Consensus       640 l~~~a  644 (885)
                      +.+++
T Consensus       203 l~~ga  207 (615)
T KOG0508|consen  203 LKHGA  207 (615)
T ss_pred             HhCCc
Confidence            99997

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.58  E-value=3.8e-15  Score=147.64  Aligned_cols=100  Identities=18%  Similarity=0.162  Sum_probs=90.7

Q ss_pred             CccCCCCCcHHHHHHHcCChh---hHHHHHhCCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCC
Q 002751          507 NVIDDGGQGVVHLAAALGYEW---AMRPIIATGVSPNFRD-ARGRTALHWASYFGREETVIMLVK-LGAAPGAVEDPTPA  581 (885)
Q Consensus       507 n~~D~~G~TpLH~AA~~G~~~---iV~~LL~~Gadin~~D-~~G~TPLH~Aa~~G~~eiV~~LL~-~GAd~n~~dd~~~~  581 (885)
                      +.+|..|+||||+|+..|+.+   ++++|+..|+++|.+| ..|+||||+|+..|+.+++++|+. .|++++.++     
T Consensus        49 ~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~-----  123 (154)
T PHA02736         49 LEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILN-----  123 (154)
T ss_pred             HHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcccc-----
Confidence            456889999999999999874   6889999999999998 489999999999999999999998 599998877     


Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCC
Q 002751          582 FPGGQTAADLASSRGHKGIAGYLAEADLSSH  612 (885)
Q Consensus       582 d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~  612 (885)
                       ..|+||||+|+..|+.+++++|+++|++..
T Consensus       124 -~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736        124 -YAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             -CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence             799999999999999999999999996543

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.58  E-value=2.2e-15  Score=162.06  Aligned_cols=125  Identities=22%  Similarity=0.287  Sum_probs=81.5

Q ss_pred             CccCCCCCcHHHHHHHcCChhhHHHHHhCC-CCCCccCC--------------------------------------CCC
Q 002751          507 NVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDA--------------------------------------RGR  547 (885)
Q Consensus       507 n~~D~~G~TpLH~AA~~G~~~iV~~LL~~G-adin~~D~--------------------------------------~G~  547 (885)
                      |..|.+|.|+||||+.++++++|+.||+.| +++|.+++                                      .|.
T Consensus       262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQ  341 (452)
T KOG0514|consen  262 NLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQ  341 (452)
T ss_pred             hhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcc
Confidence            445566666666666666666666666554 34444443                                      366


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHH
Q 002751          548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA  627 (885)
Q Consensus       548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tA  627 (885)
                      |+||+|+.+|+.++|+.||..|||+|++|+      +|.|+|++|+.+||.+|+++||..    ...|..+.|.+ |.||
T Consensus       342 TALMLAVSHGr~d~vk~LLacgAdVNiQDd------DGSTALMCA~EHGhkEivklLLA~----p~cd~sLtD~D-gSTA  410 (452)
T KOG0514|consen  342 TALMLAVSHGRVDMVKALLACGADVNIQDD------DGSTALMCAAEHGHKEIVKLLLAV----PSCDISLTDVD-GSTA  410 (452)
T ss_pred             hhhhhhhhcCcHHHHHHHHHccCCCccccC------CccHHHhhhhhhChHHHHHHHhcc----CcccceeecCC-Cchh
Confidence            667777888888888888888888888774      888888888888888888887753    23555566665 6655


Q ss_pred             HHH----hhHHHHHHHHHc
Q 002751          628 AAL----AAEKANETAAQI  642 (885)
Q Consensus       628 a~~----~~~~~ve~Ll~~  642 (885)
                      +.+    |+.++.-+|-.+
T Consensus       411 l~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  411 LSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             hhhHHhcCchHHHHHHHHH
Confidence            443    444554444433

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.57  E-value=1.6e-14  Score=158.21  Aligned_cols=115  Identities=13%  Similarity=0.123  Sum_probs=98.7

Q ss_pred             CccCCCCCcHH-HHHHHcCChhhHHHHHhCCCCCCccC----CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 002751          507 NVIDDGGQGVV-HLAAALGYEWAMRPIIATGVSPNFRD----ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPA  581 (885)
Q Consensus       507 n~~D~~G~TpL-H~AA~~G~~~iV~~LL~~Gadin~~D----~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~  581 (885)
                      -.+|..|.|++ |.|+..|+.+++++|+++|+++|.++    ..|.||||+|+..|+.+++++|+++||+++..++    
T Consensus        26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~----  101 (300)
T PHA02884         26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAE----  101 (300)
T ss_pred             hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccC----
Confidence            35788888754 56667789999999999999999974    5899999999999999999999999999998653    


Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh
Q 002751          582 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA  632 (885)
Q Consensus       582 d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~  632 (885)
                       ..|.||||+|+..|+.+++++|+++|     ++++.++.. |.+|++.+.
T Consensus       102 -~~g~TpLh~Aa~~~~~eivklLL~~G-----Adin~kd~~-G~TpL~~A~  145 (300)
T PHA02884        102 -EAKITPLYISVLHGCLKCLEILLSYG-----ADINIQTND-MVTPIELAL  145 (300)
T ss_pred             -CCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHH
Confidence             57999999999999999999999999     666666666 777776643

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.56  E-value=1e-14  Score=179.18  Aligned_cols=166  Identities=25%  Similarity=0.280  Sum_probs=127.9

Q ss_pred             ccCCCCcccCHHHHHHHHHh---H-HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHH---------------
Q 002751          471 IEGDCPNSRDKLIQNLLRNR---L-CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRP---------------  531 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL~~~---l-~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~---------------  531 (885)
                      ..+++.+..+.++.+++...   . +......++..|+++|..-..|.||||+|+..|+.+++..               
T Consensus       428 ~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~  507 (1143)
T KOG4177|consen  428 KRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKG  507 (1143)
T ss_pred             ccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhc
Confidence            35666666666655544211   1 2222334555666666666666666666666666655554               


Q ss_pred             ------------------HHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751          532 ------------------IIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS  593 (885)
Q Consensus       532 ------------------LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa  593 (885)
                                        ++++|++++.++..|.||||.||.+|+.++|++||++||+++.++      ..|+||||.|+
T Consensus       508 l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~------~~G~TPLH~Aa  581 (1143)
T KOG4177|consen  508 LTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKD------KLGYTPLHQAA  581 (1143)
T ss_pred             cchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccC------CCCCChhhHHH
Confidence                              455788899999999999999999999999999999999999988      79999999999


Q ss_pred             hcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751          594 SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV  644 (885)
Q Consensus       594 ~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a  644 (885)
                      ..|+.+|+.+|+++|++++..+++....  ...|...++.++++.+...++
T Consensus       582 ~~G~~~i~~LLlk~GA~vna~d~~g~Tp--L~iA~~lg~~~~~k~l~~~~~  630 (1143)
T KOG4177|consen  582 QQGHNDIAELLLKHGASVNAADLDGFTP--LHIAVRLGYLSVVKLLKVVTA  630 (1143)
T ss_pred             HcChHHHHHHHHHcCCCCCcccccCcch--hHHHHHhcccchhhHHHhccC
Confidence            9999999999999997777777665554  567778888999999999987

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.56  E-value=4.7e-15  Score=172.63  Aligned_cols=132  Identities=23%  Similarity=0.163  Sum_probs=110.7

Q ss_pred             cccCHHHHHHHHH---hHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHh-CC-CCCCccCCCCCCHHH
Q 002751          477 NSRDKLIQNLLRN---RLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA-TG-VSPNFRDARGRTALH  551 (885)
Q Consensus       477 n~~d~l~~~aL~~---~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~-~G-adin~~D~~G~TPLH  551 (885)
                      |.+|..++++|+.   ......+..|+..|+++|.+++++.||||.||..|+..+|+-||+ .| ...|..|-.|.||||
T Consensus       267 ~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLH  346 (929)
T KOG0510|consen  267 NDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLH  346 (929)
T ss_pred             hcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchh
Confidence            4445445555532   224455788999999999999999999999999999999999998 44 567889999999999


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCC
Q 002751          552 WASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSS  611 (885)
Q Consensus       552 ~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~  611 (885)
                      +|+..||..++++||.+||......   ..|.+|.||||+|+..|+..+|++|+.+|++.
T Consensus       347 laa~~gH~~v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I  403 (929)
T KOG0510|consen  347 LAAKSGHDRVVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHGADI  403 (929)
T ss_pred             hhhhcCHHHHHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcCCce
Confidence            9999999999999999999876311   12489999999999999999999999999554

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.55  E-value=1.8e-14  Score=162.34  Aligned_cols=147  Identities=26%  Similarity=0.276  Sum_probs=124.2

Q ss_pred             HHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 002751          496 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV  575 (885)
Q Consensus       496 v~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~  575 (885)
                      +..|+..|+++|..+.+|.|+||-+|.-.+.+||++|+++|++||..|..||||||-|+.+||..++.+|+.+||++..+
T Consensus        56 v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~av  135 (527)
T KOG0505|consen   56 VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAV  135 (527)
T ss_pred             HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhc
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999887665


Q ss_pred             C-----------------------------------------------------CCCCCCCCCCcHHHHHHhcCcHHHHH
Q 002751          576 E-----------------------------------------------------DPTPAFPGGQTAADLASSRGHKGIAG  602 (885)
Q Consensus       576 d-----------------------------------------------------d~~~~d~~G~TPLhlAa~~G~~eiv~  602 (885)
                      +                                                     +....+..|.|.||+|+.+|+.++.+
T Consensus       136 Nsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~  215 (527)
T KOG0505|consen  136 NSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAA  215 (527)
T ss_pred             cCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHH
Confidence            3                                                     11244466999999999999999999


Q ss_pred             HHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751          603 YLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV  644 (885)
Q Consensus       603 lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a  644 (885)
                      +|+++|.++...+.+.-+.  ...|++.|..++.++|+++++
T Consensus       216 lLl~ag~~~~~~D~dgWtP--lHAAA~Wg~~~~~elL~~~ga  255 (527)
T KOG0505|consen  216 LLLQAGYSVNIKDYDGWTP--LHAAAHWGQEDACELLVEHGA  255 (527)
T ss_pred             HHHHhccCcccccccCCCc--ccHHHHhhhHhHHHHHHHhhc
Confidence            9999995544444433332  346777888999999999997

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.55  E-value=1.2e-14  Score=144.03  Aligned_cols=126  Identities=14%  Similarity=0.146  Sum_probs=99.8

Q ss_pred             CCccCCCCCcHHHHHHHcCChhhHHHHHhCCC--C-----CCccCCCCCCHHHHHHHcCCHH---HHHHHHHcCCCCCCC
Q 002751          506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGV--S-----PNFRDARGRTALHWASYFGREE---TVIMLVKLGAAPGAV  575 (885)
Q Consensus       506 in~~D~~G~TpLH~AA~~G~~~iV~~LL~~Ga--d-----in~~D~~G~TPLH~Aa~~G~~e---iV~~LL~~GAd~n~~  575 (885)
                      ++..|..|.||||+||..|+  ++.+++..+.  +     ++.+|..|+||||+|+..|+.+   ++++|++.|++++.+
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~--~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~   87 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGG--VTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK   87 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCC--HHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence            45678899999999999998  3344433332  2     3356889999999999999874   688999999999887


Q ss_pred             CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH-cCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcCC
Q 002751          576 EDPTPAFPGGQTAADLASSRGHKGIAGYLAE-ADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV  644 (885)
Q Consensus       576 dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe-~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~a  644 (885)
                      ++     ..|.||||+|+..|+.+++++|+. .|     .+++.++.. |.+|+..    +..++++.|+..++
T Consensus        88 ~~-----~~g~T~Lh~A~~~~~~~i~~~Ll~~~g-----~d~n~~~~~-g~tpL~~A~~~~~~~i~~~Ll~~ga  150 (154)
T PHA02736         88 ER-----VFGNTPLHIAVYTQNYELATWLCNQPG-----VNMEILNYA-FKTPYYVACERHDAKMMNILRAKGA  150 (154)
T ss_pred             CC-----CCCCcHHHHHHHhCCHHHHHHHHhCCC-----CCCccccCC-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            62     489999999999999999999997 47     455666665 6666554    45789999999886

>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors

Probab=99.54  E-value=1.7e-14  Score=125.14  Aligned_cols=79  Identities=29%  Similarity=0.519  Sum_probs=69.4

Q ss_pred             EEEEeecCCCCCCCCeEEEEEc-cCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCC-CCCcceeEEEEeCCCcc
Q 002751          308 SIRDFSPDWAYSGAETKVLIIG-MFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRLA  385 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G-~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pp-h~~G~V~l~Vt~~n~~~  385 (885)
                      .|+.++|+||++.||++|+|+| +|+.        ++.|+||+..|-.|+|++.+|+|.+|| |.||.|+|++......-
T Consensus         2 ~I~ai~P~eG~~tGGt~VtI~GenF~~--------gl~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~   73 (85)
T cd01175           2 CIKAISPSEGWTTGGATVIIIGDNFFD--------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQF   73 (85)
T ss_pred             cccEecCCCCcccCCeEEEEECCCCCC--------CcEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceee
Confidence            5999999999999999999999 6654        699999999999999999999999999 89999999999877776


Q ss_pred             cc-cceeeec
Q 002751          386 CS-EVREFEY  394 (885)
Q Consensus       386 ~S-ev~~FeY  394 (885)
                      |. ..-.|-|
T Consensus        74 ~~~~p~~f~y   83 (85)
T cd01175          74 CKGTPGRFVY   83 (85)
T ss_pred             ccCCCceEEe
Confidence            64 3345555

COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.

>PHA02730 ankyrin-like protein; Provisional

Probab=99.52  E-value=9.9e-14  Score=164.83  Aligned_cols=177  Identities=10%  Similarity=-0.022  Sum_probs=131.1

Q ss_pred             ccCHHHHHHHH----Hh--HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--ChhhHHHHHhCCC--CCCccCCCCC
Q 002751          478 SRDKLIQNLLR----NR--LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG--YEWAMRPIIATGV--SPNFRDARGR  547 (885)
Q Consensus       478 ~~d~l~~~aL~----~~--l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G--~~~iV~~LL~~Ga--din~~D~~G~  547 (885)
                      .+|..+.++|+    ..  ....++++|+++|++++.+|..|.||||+|+..+  +.++|++|+.+|+  +++..|..++
T Consensus        36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d  115 (672)
T PHA02730         36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIND  115 (672)
T ss_pred             hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCC
Confidence            44544555554    32  1357889999999999999999999999999977  7999999999965  5588888899


Q ss_pred             CHHHHHHH--cCCHHHHHHHHH-cCCCCCCCCCCCCCC-CCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCC--ccccC
Q 002751          548 TALHWASY--FGREETVIMLVK-LGAAPGAVEDPTPAF-PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSL--TVNEN  621 (885)
Q Consensus       548 TPLH~Aa~--~G~~eiV~~LL~-~GAd~n~~dd~~~~d-~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~l--n~~d~  621 (885)
                      +|||.++.  .++.++|++|+. .|++++...+  ..+ ..|.+|+++|+..++.++|++|++.|+++..-..  ...+.
T Consensus       116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~--~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~  193 (672)
T PHA02730        116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTN--YYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDS  193 (672)
T ss_pred             chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhh--hhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccC
Confidence            99999999  999999999996 6778876531  111 3789999999999999999999999988742211  11222


Q ss_pred             cchhHH----------HHHhhHHHHHHHHHcCC-CCCCCchhhhhc
Q 002751          622 GMDNVA----------AALAAEKANETAAQIGV-QSDGPAAEQLSL  656 (885)
Q Consensus       622 ~~g~tA----------a~~~~~~~ve~Ll~~~a-~~~~~~~~qlsl  656 (885)
                      ....+.          ......++++.|+++|+ .+.++......|
T Consensus       194 ~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpL  239 (672)
T PHA02730        194 DRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPI  239 (672)
T ss_pred             CccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence            212111          23336899999999999 555544333333

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.51  E-value=6.3e-14  Score=142.17  Aligned_cols=139  Identities=20%  Similarity=0.123  Sum_probs=120.5

Q ss_pred             HHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 002751          496 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV  575 (885)
Q Consensus       496 v~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~  575 (885)
                      ++.++.+|...|..+-.+++|+.++....|.+.+-.+.+  .-+|..|..|.|||+||+.+|+..+|++||+.||++++.
T Consensus       112 ~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~--n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~l  189 (296)
T KOG0502|consen  112 VSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVN--NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDAL  189 (296)
T ss_pred             eeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhh--ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhh
Confidence            455678899999999999999999999998887766654  467899999999999999999999999999999999988


Q ss_pred             CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751          576 EDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV  644 (885)
Q Consensus       576 dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a  644 (885)
                      .      ....++|.+|+..|+.+||++|++++.+++..+.|-...  ...|..-++.++|+.|+..|+
T Consensus       190 g------k~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTp--LlyAvrgnhvkcve~Ll~sGA  250 (296)
T KOG0502|consen  190 G------KYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTP--LLYAVRGNHVKCVESLLNSGA  250 (296)
T ss_pred             h------hhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCce--eeeeecCChHHHHHHHHhcCC
Confidence            7      688899999999999999999999997766666544433  335566678999999999998

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.51  E-value=2.7e-14  Score=160.79  Aligned_cols=152  Identities=25%  Similarity=0.248  Sum_probs=126.5

Q ss_pred             CCCCcccCHHHHHHHHHh---HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCC---------
Q 002751          473 GDCPNSRDKLIQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN---------  540 (885)
Q Consensus       473 ~~~in~~d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin---------  540 (885)
                      +.++|..+..+-++++..   ....+|++|++.|++||..|..|+||||.|+..||..++++|+.+|+++.         
T Consensus        63 ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P  142 (527)
T KOG0505|consen   63 GASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMP  142 (527)
T ss_pred             CCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCc
Confidence            345555555555666432   35778999999999999999999999999999999999999998775532         


Q ss_pred             --------------------------------------------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002751          541 --------------------------------------------------FRDARGRTALHWASYFGREETVIMLVKLGA  570 (885)
Q Consensus       541 --------------------------------------------------~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GA  570 (885)
                                                                        .++..|.|+||.|+..|..++.++||.+|.
T Consensus       143 ~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~  222 (527)
T KOG0505|consen  143 YDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGY  222 (527)
T ss_pred             cccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhcc
Confidence                                                              223458899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHH
Q 002751          571 APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKAN  636 (885)
Q Consensus       571 d~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~v  636 (885)
                      +++++|      .+||||||.|+..|+.+++++|+++|     ++++.+... |.++++.+..+.+
T Consensus       223 ~~~~~D------~dgWtPlHAAA~Wg~~~~~elL~~~g-----a~~d~~t~~-g~~p~dv~dee~~  276 (527)
T KOG0505|consen  223 SVNIKD------YDGWTPLHAAAHWGQEDACELLVEHG-----ADMDAKTKM-GETPLDVADEEEL  276 (527)
T ss_pred             Cccccc------ccCCCcccHHHHhhhHhHHHHHHHhh-----cccchhhhc-CCCCccchhhhhH
Confidence            999988      79999999999999999999999999     667776666 7777777766555

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.46  E-value=1.2e-13  Score=148.89  Aligned_cols=132  Identities=22%  Similarity=0.225  Sum_probs=105.3

Q ss_pred             ccccCCCCcccCHHHHHHHH--------HhHHHHHHHHHHhCCCCCCccCC-CCCcHHHHHHHcCChhhHHHHHhCCCCC
Q 002751          469 MAIEGDCPNSRDKLIQNLLR--------NRLCEWLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSP  539 (885)
Q Consensus       469 ~~~~~~~in~~d~l~~~aL~--------~~l~e~Lv~~Lle~Gadin~~D~-~G~TpLH~AA~~G~~~iV~~LL~~Gadi  539 (885)
                      +.....++|..+..+.+++.        ......+|..|... .|||.+-. .|+|+|++|+.+|..++|+.||.+|+||
T Consensus       288 LDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-gnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdV  366 (452)
T KOG0514|consen  288 LDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM-GDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADV  366 (452)
T ss_pred             hccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc-cCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCC
Confidence            33445566666665554441        11222334444443 58888765 6999999999999999999999999999


Q ss_pred             CccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q 002751          540 NFRDARGRTALHWASYFGREETVIMLVKL-GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA  607 (885)
Q Consensus       540 n~~D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~  607 (885)
                      |.+|.+|.|+||.||.+||.++|++||.. ++|+...|      .+|.|+|.+|...||.+|.-+|..+
T Consensus       367 NiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD------~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  367 NIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTD------VDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             ccccCCccHHHhhhhhhChHHHHHHHhccCcccceeec------CCCchhhhhHHhcCchHHHHHHHHH
Confidence            99999999999999999999999999976 66776666      7999999999999999999988754

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.43  E-value=5.5e-13  Score=119.52  Aligned_cols=80  Identities=29%  Similarity=0.342  Sum_probs=71.5

Q ss_pred             HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751          493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP  572 (885)
Q Consensus       493 e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~  572 (885)
                      ..+++.|++.+.+++.    |.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus        10 ~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~   85 (89)
T PF12796_consen   10 LEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADV   85 (89)
T ss_dssp             HHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-T
T ss_pred             HHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            3456778888988886    999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 002751          573 GAVE  576 (885)
Q Consensus       573 n~~d  576 (885)
                      +.+|
T Consensus        86 ~~~n   89 (89)
T PF12796_consen   86 NIRN   89 (89)
T ss_dssp             TSS-
T ss_pred             CCcC
Confidence            8764

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.43  E-value=2.7e-13  Score=157.21  Aligned_cols=148  Identities=20%  Similarity=0.120  Sum_probs=104.8

Q ss_pred             HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 002751          492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA  571 (885)
Q Consensus       492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd  571 (885)
                      ...++++|++..+-++.+|..|.+|||+||+.|+.+++++|+.++..+|..+..|.||||.|+..||.+++.+||.+|++
T Consensus        61 ~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~ad  140 (854)
T KOG0507|consen   61 QNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNAD  140 (854)
T ss_pred             chHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCC
Confidence            45567788888888888888899999999999999999999988888888888999999999999999999999999998


Q ss_pred             CCCCCCC-----------------------------------CCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCC
Q 002751          572 PGAVEDP-----------------------------------TPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSL  616 (885)
Q Consensus       572 ~n~~dd~-----------------------------------~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~l  616 (885)
                      +-.+++.                                   .+++..+.+|||+|+.+||.+|++.|++.|.+.+.   
T Consensus       141 p~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~---  217 (854)
T KOG0507|consen  141 PFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINY---  217 (854)
T ss_pred             ccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCccc---
Confidence            8777620                                   02234445556666666666666666666633222   


Q ss_pred             ccccCc--chhHHHHHhhHHHHHHHHHcCC
Q 002751          617 TVNENG--MDNVAAALAAEKANETAAQIGV  644 (885)
Q Consensus       617 n~~d~~--~g~tAa~~~~~~~ve~Ll~~~a  644 (885)
                        ..+.  -...|+..|..++|.+|++.+.
T Consensus       218 --~t~~gtalheaalcgk~evvr~ll~~gi  245 (854)
T KOG0507|consen  218 --TTEDGTALHEAALCGKAEVVRFLLEIGI  245 (854)
T ss_pred             --ccccchhhhhHhhcCcchhhhHHHhhcc
Confidence              2221  0224455555666666666654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.42  E-value=2.7e-13  Score=141.92  Aligned_cols=136  Identities=21%  Similarity=0.188  Sum_probs=109.4

Q ss_pred             ccCCCCcccCHHHHHHH---HHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCC
Q 002751          471 IEGDCPNSRDKLIQNLL---RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR  547 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL---~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~  547 (885)
                      ..+.+.|..|.-+-.+|   ....+..+++.|+.+|+.+|..+....||||+||..||.++|..||...+|+|+.+..|.
T Consensus        22 ~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgn  101 (448)
T KOG0195|consen   22 DTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGN  101 (448)
T ss_pred             CcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCC
Confidence            34455555554433333   223466788899999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCC
Q 002751          548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSH  612 (885)
Q Consensus       548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~  612 (885)
                      |||||||..|...+++-|+..||.+++.+      ..|.|||+.|.-.-...+.++--++|-.++
T Consensus       102 tplhyacfwgydqiaedli~~ga~v~icn------k~g~tpldkakp~l~~~l~e~aek~gq~~n  160 (448)
T KOG0195|consen  102 TPLHYACFWGYDQIAEDLISCGAAVNICN------KKGMTPLDKAKPMLKNTLLEIAEKHGQSPN  160 (448)
T ss_pred             CchhhhhhhcHHHHHHHHHhccceeeecc------cCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999887      899999998854433334444445664443

>PHA02792 ankyrin-like protein; Provisional

Probab=99.41  E-value=1.8e-12  Score=152.86  Aligned_cols=139  Identities=6%  Similarity=-0.071  Sum_probs=117.3

Q ss_pred             HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCC--CCHHHHHHHcCCHH---HHHHHH
Q 002751          492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARG--RTALHWASYFGREE---TVIMLV  566 (885)
Q Consensus       492 ~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G--~TPLH~Aa~~G~~e---iV~~LL  566 (885)
                      .-.+++.|+++|++++ + ..+..++|.||..|+.++|++|+++||++|.+|..|  .||||+|+.....+   ++++|+
T Consensus       320 ~ieiIK~LId~Ga~~~-r-~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLI  397 (631)
T PHA02792        320 YINVIKCMIDEGATLY-R-FKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCK  397 (631)
T ss_pred             cHHHHHHHHHCCCccc-c-CCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHH
Confidence            3456889999999976 2 236678999999999999999999999999999875  69999988766654   578899


Q ss_pred             HcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhh--------------
Q 002751          567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA--------------  632 (885)
Q Consensus       567 ~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~--------------  632 (885)
                      ++||++|.++      ..|+||||+|+..++.+++++|+++|     ++++.++.. |.+|+..+.              
T Consensus       398 s~GADIN~kD------~~G~TPLh~Aa~~~n~eivelLLs~G-----ADIN~kD~~-G~TpL~~A~~~~~~~~~~i~~~~  465 (631)
T PHA02792        398 PYIDDINKID------KHGRSILYYCIESHSVSLVEWLIDNG-----ADINITTKY-GSTCIGICVILAHACIPEIAELY  465 (631)
T ss_pred             hcCCcccccc------ccCcchHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCC-CCCHHHHHHHHHhcccHHHHHHH
Confidence            9999999887      79999999999999999999999999     667777777 888877754              


Q ss_pred             HHHHHHHHHcCC
Q 002751          633 EKANETAAQIGV  644 (885)
Q Consensus       633 ~~~ve~Ll~~~a  644 (885)
                      .++++.|++++.
T Consensus       466 ~~il~lLLs~~p  477 (631)
T PHA02792        466 IKILEIILSKLP  477 (631)
T ss_pred             HHHHHHHHhcCC
Confidence            366888888875

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.38  E-value=1.4e-12  Score=116.09  Aligned_cols=112  Identities=20%  Similarity=0.209  Sum_probs=87.3

Q ss_pred             HHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhc
Q 002751          516 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR  595 (885)
Q Consensus       516 pLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~  595 (885)
                      -+.|+..+|..+-|+-.+..|.++|..- .|+|||||||-+|..+++++|+..||+++..|      ..|-|||--|+..
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kD------KygITPLLsAvwE   77 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKD------KYGITPLLSAVWE   77 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCcc------ccCCcHHHHHHHH
Confidence            3567888888888888888888877654 68888888888888888888888888887776      7888888888888


Q ss_pred             CcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHH
Q 002751          596 GHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAA  640 (885)
Q Consensus       596 G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll  640 (885)
                      ||.+||++|+..|     ++.+++..+ |.+.++....+.++.|+
T Consensus        78 GH~~cVklLL~~G-----Adrt~~~Pd-G~~~~eate~edIr~LL  116 (117)
T KOG4214|consen   78 GHRDCVKLLLQNG-----ADRTIHAPD-GTALIEATEEEDIRELL  116 (117)
T ss_pred             hhHHHHHHHHHcC-----cccceeCCC-chhHHhhccHHHHHHHh
Confidence            8888888888888     556666666 77666666555555543

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.38  E-value=6.5e-12  Score=116.53  Aligned_cols=112  Identities=28%  Similarity=0.398  Sum_probs=88.1

Q ss_pred             ccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCc
Q 002751          508 VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQT  587 (885)
Q Consensus       508 ~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~T  587 (885)
                      .+|..|.||||+|+..|+.+++++|+..|.+++.++..|.||||+|+..+..+++++|+..|++++..+      ..|.|
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~~~   75 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARD------KDGNT   75 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccC------CCCCC
Confidence            346678889999888888888888888888888888888889999888888888888888887766655      57888


Q ss_pred             HHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751          588 AADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA  631 (885)
Q Consensus       588 PLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~  631 (885)
                      |+|+|+..++.+++++|+.+|     .+.+..+.. +.++.+.+
T Consensus        76 ~l~~a~~~~~~~~~~~L~~~~-----~~~~~~~~~-~~~~l~~~  113 (126)
T cd00204          76 PLHLAARNGNLDVVKLLLKHG-----ADVNARDKD-GRTPLHLA  113 (126)
T ss_pred             HHHHHHHcCcHHHHHHHHHcC-----CCCcccCCC-CCCHHHHH
Confidence            999888888888888888887     334444443 44554443

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.37  E-value=1.3e-12  Score=128.44  Aligned_cols=105  Identities=24%  Similarity=0.221  Sum_probs=93.0

Q ss_pred             cHHHHHHHcCChhhHHHHHhCCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751          515 GVVHLAAALGYEWAMRPIIATGVS-PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS  593 (885)
Q Consensus       515 TpLH~AA~~G~~~iV~~LL~~Gad-in~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa  593 (885)
                      ..+-+|+..+....|+.||+..++ +|.+|.+|+||||-|+++||.+||..|+..||++++++      ..||||||-||
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T------~~GWTPLhSAc  138 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKT------NEGWTPLHSAC  138 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccccc------ccCccchhhhh
Confidence            346789999999999999887665 89999999999999999999999999999999999999      69999999999


Q ss_pred             hcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751          594 SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA  631 (885)
Q Consensus       594 ~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~  631 (885)
                      ...+.+|+.+||.+|     +++|...+. ..+|++++
T Consensus       139 kWnN~~va~~LLqhg-----aDVnA~t~g-~ltpLhla  170 (228)
T KOG0512|consen  139 KWNNFEVAGRLLQHG-----ADVNAQTKG-LLTPLHLA  170 (228)
T ss_pred             cccchhHHHHHHhcc-----Ccccccccc-cchhhHHh
Confidence            999999999999999     666666664 55777664

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.37  E-value=4.1e-12  Score=156.56  Aligned_cols=152  Identities=20%  Similarity=0.104  Sum_probs=111.6

Q ss_pred             CCCCcccCHHHHHHHH----HhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC---ChhhHHHHHhCCCC------C
Q 002751          473 GDCPNSRDKLIQNLLR----NRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG---YEWAMRPIIATGVS------P  539 (885)
Q Consensus       473 ~~~in~~d~l~~~aL~----~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G---~~~iV~~LL~~Gad------i  539 (885)
                      +.++|..|..++++|.    ......++++|+++|+    .+..|.||||+|+..+   ...++..++..+.+      +
T Consensus        42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~  117 (743)
T TIGR00870        42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA  117 (743)
T ss_pred             ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence            6777877777777765    2335567788888887    5778999999988722   22333444444422      1


Q ss_pred             C----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC--------CCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q 002751          540 N----FRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPT--------PAFPGGQTAADLASSRGHKGIAGYLAEA  607 (885)
Q Consensus       540 n----~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~--------~~d~~G~TPLhlAa~~G~~eiv~lLLe~  607 (885)
                      +    ..+..|.||||+||.+|+.++|++|+++||+++..+...        .....|.||||+|+..|+.+++++|++.
T Consensus       118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~  197 (743)
T TIGR00870       118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED  197 (743)
T ss_pred             ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC
Confidence            1    123469999999999999999999999999998764200        1124699999999999999999999999


Q ss_pred             CCCCCCcCCccccCcchhHHHHHhhHH
Q 002751          608 DLSSHLSSLTVNENGMDNVAAALAAEK  634 (885)
Q Consensus       608 Ga~~~~~~ln~~d~~~g~tAa~~~~~~  634 (885)
                      |     ++++..+.. |.++++.+...
T Consensus       198 g-----adin~~d~~-g~T~Lh~A~~~  218 (743)
T TIGR00870       198 P-----ADILTADSL-GNTLLHLLVME  218 (743)
T ss_pred             C-----cchhhHhhh-hhHHHHHHHhh
Confidence            9     567777777 88888876544

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.36  E-value=3.1e-12  Score=130.60  Aligned_cols=108  Identities=31%  Similarity=0.449  Sum_probs=99.4

Q ss_pred             HHHHHHhCCCCCCccCCCCCcHHHHHHHcCC-----hhhHHHHHhCCC---CCCccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002751          495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGY-----EWAMRPIIATGV---SPNFRDARGRTALHWASYFGREETVIMLV  566 (885)
Q Consensus       495 Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~-----~~iV~~LL~~Ga---din~~D~~G~TPLH~Aa~~G~~eiV~~LL  566 (885)
                      .+..++..|++++.+|..|.||||+|+..|+     .+++++|++.|+   +.+.+|..|+||||||+..|+.+++++|+
T Consensus        88 ~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll  167 (235)
T COG0666          88 IVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLL  167 (235)
T ss_pred             HHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHH
Confidence            3467888999999999999999999999999     999999999999   66666999999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q 002751          567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD  608 (885)
Q Consensus       567 ~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~G  608 (885)
                      +.|++++..+      ..|.||+++|+..|+.+++..|+..+
T Consensus       168 ~~~~~~~~~~------~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         168 EAGADPNSRN------SYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             hcCCCCcccc------cCCCcchhhhcccchHHHHHHHHhcC
Confidence            9999998876      69999999999999999999999976

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.34  E-value=1.2e-12  Score=151.94  Aligned_cols=132  Identities=20%  Similarity=0.228  Sum_probs=117.9

Q ss_pred             CCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 002751          504 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFP  583 (885)
Q Consensus       504 adin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~  583 (885)
                      ..+|..|..|.|+||.||..|+..++++|+++.+-++..|..|.+|||+|++.|+.++|++|+.++..+|+.+      .
T Consensus        40 ds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~------~  113 (854)
T KOG0507|consen   40 DSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVN------I  113 (854)
T ss_pred             ccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCccc------c
Confidence            3567788899999999999999999999999999999999999999999999999999999999998888777      5


Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcC
Q 002751          584 GGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIG  643 (885)
Q Consensus       584 ~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~  643 (885)
                      .|.||||+|+.+||.+++.+|+.+|+++...+-+.+.-  ...|+..|...+|+.|+...
T Consensus       114 e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~--ldlA~qfgr~~Vvq~ll~~~  171 (854)
T KOG0507|consen  114 ENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETV--LDLASRFGRAEVVQMLLQKK  171 (854)
T ss_pred             cCcCccchhhhhcchHHHHHHHhcCCCccccCcccccH--HHHHHHhhhhHHHHHHhhhc
Confidence            99999999999999999999999996666655444443  56888899999999999873

>PHA02792 ankyrin-like protein; Provisional

Probab=99.34  E-value=3e-12  Score=150.94  Aligned_cols=111  Identities=15%  Similarity=-0.048  Sum_probs=96.7

Q ss_pred             HHHHHHHHHhCCCCCCccCCCC--CcHHHHHHHcCChh---hHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002751          492 CEWLVWKIHEGGKGPNVIDDGG--QGVVHLAAALGYEW---AMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV  566 (885)
Q Consensus       492 ~e~Lv~~Lle~Gadin~~D~~G--~TpLH~AA~~G~~~---iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL  566 (885)
                      ...+++.|+++|+++|.+|..|  .||||+|+......   ++++|+.+|+++|.+|..|+||||+|+..++.+++++|+
T Consensus       351 n~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLL  430 (631)
T PHA02792        351 DPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLI  430 (631)
T ss_pred             CHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHH
Confidence            3457888999999999999875  69999987766543   578899999999999999999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCCCCCCCcHHHHHHh----------cCcHHHHHHHHHcC
Q 002751          567 KLGAAPGAVEDPTPAFPGGQTAADLASS----------RGHKGIAGYLAEAD  608 (885)
Q Consensus       567 ~~GAd~n~~dd~~~~d~~G~TPLhlAa~----------~G~~eiv~lLLe~G  608 (885)
                      ++|++++..+      ..|.||||+|+.          ..+.+++++|+++|
T Consensus       431 s~GADIN~kD------~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~  476 (631)
T PHA02792        431 DNGADINITT------KYGSTCIGICVILAHACIPEIAELYIKILEIILSKL  476 (631)
T ss_pred             HCCCCCCCcC------CCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcC
Confidence            9999999887      699999999976          22356788999888

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.33  E-value=6.7e-12  Score=154.62  Aligned_cols=160  Identities=16%  Similarity=0.049  Sum_probs=119.5

Q ss_pred             CcccCHHHHHHHH--HhHHHHHHHHHHhCCCC------CCc----cCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccC
Q 002751          476 PNSRDKLIQNLLR--NRLCEWLVWKIHEGGKG------PNV----IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD  543 (885)
Q Consensus       476 in~~d~l~~~aL~--~~l~e~Lv~~Lle~Gad------in~----~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D  543 (885)
                      .+..+..++.+..  ....+.++..+...+.+      ++.    .+..|.||||+||..|+.++|++|+++|+++|.++
T Consensus        79 ~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~  158 (743)
T TIGR00870        79 GAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARA  158 (743)
T ss_pred             CCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCc
Confidence            3445566666665  34556666666665532      111    23469999999999999999999999999999763


Q ss_pred             --------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC---------cHHH
Q 002751          544 --------------ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG---------HKGI  600 (885)
Q Consensus       544 --------------~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G---------~~ei  600 (885)
                                    ..|.||||+|+..|+.+++++|++.|+|++.+|      ..|+||||+|+..+         ...+
T Consensus       159 ~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d------~~g~T~Lh~A~~~~~~~~~~~~l~~~~  232 (743)
T TIGR00870       159 CGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTAD------SLGNTLLHLLVMENEFKAEYEELSCQM  232 (743)
T ss_pred             CCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHh------hhhhHHHHHHHhhhhhhHHHHHHHHHH
Confidence                          359999999999999999999999999998887      69999999999987         3457


Q ss_pred             HHHHHHcCCCCCCc--CCccccCcchhH----HHHHhhHHHHHHHHHc
Q 002751          601 AGYLAEADLSSHLS--SLTVNENGMDNV----AAALAAEKANETAAQI  642 (885)
Q Consensus       601 v~lLLe~Ga~~~~~--~ln~~d~~~g~t----Aa~~~~~~~ve~Ll~~  642 (885)
                      .+++++.+......  ..++.|+. |.+    |+..++.++++.|++.
T Consensus       233 ~~~l~~ll~~~~~~~el~~i~N~~-g~TPL~~A~~~g~~~l~~lLL~~  279 (743)
T TIGR00870       233 YNFALSLLDKLRDSKELEVILNHQ-GLTPLKLAAKEGRIVLFRLKLAI  279 (743)
T ss_pred             HHHHHHHHhccCChHhhhhhcCCC-CCCchhhhhhcCCccHHHHHHHH
Confidence            77787776443211  11344544 555    4556678899999985

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.29  E-value=4.5e-11  Score=110.84  Aligned_cols=118  Identities=30%  Similarity=0.352  Sum_probs=104.4

Q ss_pred             HHHHHHHHHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHH
Q 002751          481 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE  560 (885)
Q Consensus       481 ~l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~e  560 (885)
                      ..++.++.... ..+++.|++.|.+++..|..|.||||+|+..+..+++++|+..|++++..+..|.||+|+|+..++.+
T Consensus         9 t~l~~a~~~~~-~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~   87 (126)
T cd00204           9 TPLHLAASNGH-LEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLD   87 (126)
T ss_pred             CHHHHHHHcCc-HHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHH
Confidence            34555555443 35667788899998999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q 002751          561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLA  605 (885)
Q Consensus       561 iV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLL  605 (885)
                      ++++|+..|.+++..+      ..|.||+++|...++.+++++|+
T Consensus        88 ~~~~L~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          88 VVKLLLKHGADVNARD------KDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHHHHHcCCCCcccC------CCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999998877766      68999999999999999999874

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.28  E-value=1.3e-11  Score=129.57  Aligned_cols=101  Identities=24%  Similarity=0.235  Sum_probs=92.4

Q ss_pred             HhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 002751          500 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF-RDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDP  578 (885)
Q Consensus       500 le~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~-~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~  578 (885)
                      +..--++|.+|..|+|+|..|+..|+.++|++||+.|+|||. ++..++||||+||..|+.++.++|++.|+.+..++  
T Consensus        32 Ls~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vN--  109 (396)
T KOG1710|consen   32 LSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVN--  109 (396)
T ss_pred             HHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcccccc--
Confidence            333345899999999999999999999999999999999996 56779999999999999999999999999999888  


Q ss_pred             CCCCCCCCcHHHHHHhcCcHHHHHHHHH
Q 002751          579 TPAFPGGQTAADLASSRGHKGIAGYLAE  606 (885)
Q Consensus       579 ~~~d~~G~TPLhlAa~~G~~eiv~lLLe  606 (885)
                          .-|+|+..+|+.-||.+||.++-.
T Consensus       110 ----svgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen  110 ----SVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             ----chhhhHHHHHHHhcchHHHHHHhc
Confidence                799999999999999999988754

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.27  E-value=3.5e-12  Score=105.46  Aligned_cols=53  Identities=36%  Similarity=0.544  Sum_probs=19.6

Q ss_pred             hCC-CCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHH
Q 002751          501 EGG-KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWA  553 (885)
Q Consensus       501 e~G-adin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~A  553 (885)
                      ++| +++|..|..|.||||+||..|+.++|++|+..|++++.+|..|+||||+|
T Consensus         3 ~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    3 EHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             ---T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             ccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            344 55555555555555555555555555555555555555555555555554

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.27  E-value=7e-12  Score=139.98  Aligned_cols=108  Identities=28%  Similarity=0.238  Sum_probs=95.4

Q ss_pred             HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002751          495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGA  574 (885)
Q Consensus       495 Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~  574 (885)
                      ||+.++..--|+...++.|.|+||-|+..||.+||++||+.|+|||+.|.+||||||+||.+++..+++.|++.|+.+-+
T Consensus       565 lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfA  644 (752)
T KOG0515|consen  565 LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFA  644 (752)
T ss_pred             HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEe
Confidence            34445555578888899999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             CCCCCCCCCCCCcHHHHHH--hcCcHHHHHHHHHc
Q 002751          575 VEDPTPAFPGGQTAADLAS--SRGHKGIAGYLAEA  607 (885)
Q Consensus       575 ~dd~~~~d~~G~TPLhlAa--~~G~~eiv~lLLe~  607 (885)
                      .+-     .++.||..-+-  ..|+.+|.+||...
T Consensus       645 sTl-----SDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  645 STL-----SDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             eec-----ccccchhhhcchhhhhHHHHHHHHHHH
Confidence            664     68899998765  46899999999764

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.24  E-value=6.3e-12  Score=103.92  Aligned_cols=55  Identities=38%  Similarity=0.663  Sum_probs=33.3

Q ss_pred             HHhCC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002751          532 IIATG-VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA  592 (885)
Q Consensus       532 LL~~G-adin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA  592 (885)
                      ||++| +++|.+|..|.||||+||.+|+.++|++|+..|++++.+|      ..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d------~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKD------KDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCc------CCCCCHHHhC
Confidence            67888 9999999999999999999999999999999999999988      7999999997

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.24  E-value=2.7e-11  Score=147.14  Aligned_cols=86  Identities=31%  Similarity=0.475  Sum_probs=58.6

Q ss_pred             HHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhc
Q 002751          516 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR  595 (885)
Q Consensus       516 pLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~  595 (885)
                      .||.||..|+.+++++|+..|+++|.+|..|+||||+||..|+.+++++|+++|++++.++      ..|.||||+|+..
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d------~~G~TpLh~A~~~  158 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLD------KDGKTPLELAEEN  158 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHC
Confidence            3666666666666666666666666666666677777776677777777776666666655      4666777777666


Q ss_pred             CcHHHHHHHHHc
Q 002751          596 GHKGIAGYLAEA  607 (885)
Q Consensus       596 G~~eiv~lLLe~  607 (885)
                      |+.+++++|+++
T Consensus       159 g~~~iv~~Ll~~  170 (664)
T PTZ00322        159 GFREVVQLLSRH  170 (664)
T ss_pred             CcHHHHHHHHhC
Confidence            666677666666

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.24  E-value=2e-11  Score=108.97  Aligned_cols=87  Identities=26%  Similarity=0.316  Sum_probs=77.2

Q ss_pred             HHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 002751          499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDP  578 (885)
Q Consensus       499 Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~  578 (885)
                      .+..|.++|..- .|++||||||-+|...++++|+..|++|+.+|+.|-|||.-|.+.||.+||++||+.||+-....  
T Consensus        21 ~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~--   97 (117)
T KOG4214|consen   21 SVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHA--   97 (117)
T ss_pred             HHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeC--
Confidence            344567777543 79999999999999999999999999999999999999999999999999999999999987776  


Q ss_pred             CCCCCCCCcHHHHH
Q 002751          579 TPAFPGGQTAADLA  592 (885)
Q Consensus       579 ~~~d~~G~TPLhlA  592 (885)
                          ++|.+.+..+
T Consensus        98 ----PdG~~~~eat  107 (117)
T KOG4214|consen   98 ----PDGTALIEAT  107 (117)
T ss_pred             ----CCchhHHhhc
Confidence                7888776654

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.24  E-value=1.4e-10  Score=118.24  Aligned_cols=128  Identities=24%  Similarity=0.236  Sum_probs=105.4

Q ss_pred             CCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCC-----HHHHHHHHHcCC--CCCCCCC
Q 002751          505 GPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR-----EETVIMLVKLGA--APGAVED  577 (885)
Q Consensus       505 din~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~-----~eiV~~LL~~GA--d~n~~dd  577 (885)
                      ..+..+..+.+++|.++..+...++.+|+..|++++.+|..|.||||+|+..|+     .+++++||+.|+  +....  
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~--  142 (235)
T COG0666          65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL--  142 (235)
T ss_pred             ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc--
Confidence            334566779999999999999999999999999999999999999999999999     999999999999  33333  


Q ss_pred             CCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHH----HhhHHHHHHHHHcC
Q 002751          578 PTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAA----LAAEKANETAAQIG  643 (885)
Q Consensus       578 ~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~----~~~~~~ve~Ll~~~  643 (885)
                         +|..|.||||+|+..|+.+++++|++.|+     +++..+.. |.++..    .+..+.+..++..+
T Consensus       143 ---~~~~g~tpl~~A~~~~~~~~~~~ll~~~~-----~~~~~~~~-g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         143 ---RDEDGNTPLHWAALNGDADIVELLLEAGA-----DPNSRNSY-GVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             ---cCCCCCchhHHHHHcCchHHHHHHHhcCC-----CCcccccC-CCcchhhhcccchHHHHHHHHhcC
Confidence               23799999999999999999999999994     44444444 555444    44566666666653

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=99.23  E-value=5.9e-11  Score=143.02  Aligned_cols=263  Identities=18%  Similarity=0.205  Sum_probs=164.9

Q ss_pred             CeEEEEEccCCCCCCCCCCCceEEeeCCcccceee----eecCeEEeecCC-----C--CCcceeEEEEe-C-C----Cc
Q 002751          322 ETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEV----LTDNVIRCQAPS-----H--AAGRVPFYITG-S-N----RL  384 (885)
Q Consensus       322 gtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~----v~~gvLrC~~Pp-----h--~~G~V~l~Vt~-~-n----~~  384 (885)
                      .-++.|+=-.         ..|.-.=|++.|-..=    ..-+.+-|.+-.     -  .+|+.-.|... . |    ++
T Consensus       402 ~qlf~I~DfS---------P~Wsy~~ggvKVlV~G~~~~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l~V  472 (975)
T KOG0520|consen  402 EQLFTITDFS---------PEWSYLDGGVKVLVTGFPQDETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNLQV  472 (975)
T ss_pred             cceeeeeccC---------cccccCCCCcEEEEecCccccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEEEEE
Confidence            6677776532         2466666666554322    345788887653     2  55775544431 1 1    34


Q ss_pred             ccc--cceeeecccCCCCCCCCccccCCCchHHHHHHHHHHHhhcCCccccccccccccchhchhhhhhhhcCCCCcccc
Q 002751          385 ACS--EVREFEYREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWG  462 (885)
Q Consensus       385 ~~S--ev~~FeYr~~~~~~~~~~~~~~~~~~e~~Lq~Rl~~LL~l~~~~~~~~~~~~~~~k~~l~~~i~sl~~~~~~~~~  462 (885)
                      .|+  ....||||+-.....+.......++++..+++++..+|+.-..+.              .+.+.+....      
T Consensus       473 ~c~~~~~~~se~ref~~~~~~~~~~d~~s~~d~~~~~sl~~rl~~~~~r~--------------~~~~~s~~~~------  532 (975)
T KOG0520|consen  473 TCRISGLACSEVREFAYLVQPSQQIDKLSWEDFLFQMSLLHRLETMLNRK--------------QSILSSKPST------  532 (975)
T ss_pred             EecccceeeeeehheeecccCcccccccccccchhhhHHHHHHHHHHHHh--------------HhHhhccCCc------
Confidence            665  788999999776666555555567899999999999887322111              1111111000      


Q ss_pred             ccccccccccCCCCcccCHHHHHHHHHhHHHHHHHHHHhC--CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhC-CCCC
Q 002751          463 RVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEG--GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSP  539 (885)
Q Consensus       463 ~l~e~l~~~~~~~in~~d~l~~~aL~~~l~e~Lv~~Lle~--Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~-Gadi  539 (885)
                                ++..+.....+..-+.--+.+|.-+ ++..  ...+....-.|+|.||+++..++.|+++.+++- |...
T Consensus       533 ----------~n~~~~~~~~l~skv~~l~~~~~~r-~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~  601 (975)
T KOG0520|consen  533 ----------ENTSDAESGNLASKVVHLLNEWAYR-LLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGD  601 (975)
T ss_pred             ----------cccccccchhHHHHHHHHHHHHHHH-HHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCc
Confidence                      0111111111222222222233221 1211  123344556799999999999999999999986 7777


Q ss_pred             CccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCC-cCCc
Q 002751          540 NFRDARGRTALHWASYFGREETVIMLVKL-GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL-SSLT  617 (885)
Q Consensus       540 n~~D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~-~~ln  617 (885)
                      +..|..|.--+|+ |..++.+++-+|+.+ |..++++|      ..|+||||||+..||..++..|++.|++... .+++
T Consensus       602 ~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D------~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps  674 (975)
T KOG0520|consen  602 LELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRD------RNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPS  674 (975)
T ss_pred             hhhcccCCChhhH-hhhcCCceeEEEEeeccccccccc------CCCCcccchHhhcCHHHHHHHHHHhccccccccCCC
Confidence            7778888888888 666777777666654 77788877      7999999999999999999999998877664 3343


Q ss_pred             cccCcchhHHHHHhh
Q 002751          618 VNENGMDNVAAALAA  632 (885)
Q Consensus       618 ~~d~~~g~tAa~~~~  632 (885)
                      -.... |.+++.++.
T Consensus       675 ~~~p~-g~ta~~la~  688 (975)
T KOG0520|consen  675 PETPG-GKTAADLAR  688 (975)
T ss_pred             CCCCC-CCchhhhhh
Confidence            33333 667776654

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.23  E-value=1.5e-11  Score=100.67  Aligned_cols=54  Identities=31%  Similarity=0.449  Sum_probs=34.4

Q ss_pred             CCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002751          513 GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV  566 (885)
Q Consensus       513 G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL  566 (885)
                      |+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            567777777777777777777777777777777777777777777777777665

...

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.14  E-value=3.2e-10  Score=133.71  Aligned_cols=123  Identities=22%  Similarity=0.208  Sum_probs=105.4

Q ss_pred             CCCCcHHHHHHHcCChhhHHHHHhCCCCCCcc---------C--------------CCCCCHHHHHHHcCCHHHHHHHHH
Q 002751          511 DGGQGVVHLAAALGYEWAMRPIIATGVSPNFR---------D--------------ARGRTALHWASYFGREETVIMLVK  567 (885)
Q Consensus       511 ~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~---------D--------------~~G~TPLH~Aa~~G~~eiV~~LL~  567 (885)
                      ..|+||||+|..+.+.++|++|++.||||+++         |              ..|..||.+||..++.+|+++|++
T Consensus       182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            36999999999999999999999999999864         2              147889999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCc---chhHHHHHhhHHHHHHHHHc
Q 002751          568 LGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENG---MDNVAAALAAEKANETAAQI  642 (885)
Q Consensus       568 ~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~---~g~tAa~~~~~~~ve~Ll~~  642 (885)
                      +|||++++|      .+|+|.||..+.+-..++-.+++++|++   +...+.|+.   +...|+-.|..++.+.++++
T Consensus       262 ~gAd~~aqD------S~GNTVLH~lVi~~~~~My~~~L~~ga~---~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  262 HGADPNAQD------SNGNTVLHMLVIHFVTEMYDLALELGAN---ALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             cCCCCCccc------cCCChHHHHHHHHHHHHHHHHHHhcCCC---ccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            999999988      7999999999999889999999999976   223344443   34466777788999999988

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.13  E-value=9.9e-11  Score=95.73  Aligned_cols=54  Identities=37%  Similarity=0.580  Sum_probs=46.2

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q 002751          546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLA  605 (885)
Q Consensus       546 G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLL  605 (885)
                      |+||||+||..|+.+++++|++.|++++.+|      ..|.||||+|+.+|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d------~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQD------EDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-------TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHccCHHHHHHHC
Confidence            7899999999999999999999999999887      69999999999999999999986

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.09  E-value=2.2e-10  Score=139.29  Aligned_cols=95  Identities=27%  Similarity=0.326  Sum_probs=84.4

Q ss_pred             HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc----
Q 002751          493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL----  568 (885)
Q Consensus       493 e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~----  568 (885)
                      ...++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+.+    
T Consensus        95 ~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~  174 (664)
T PTZ00322         95 AVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCH  174 (664)
T ss_pred             HHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcc
Confidence            4457889999999999999999999999999999999999999999999999999999999999999999999998    


Q ss_pred             ---CCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751          569 ---GAAPGAVEDPTPAFPGGQTAADLAS  593 (885)
Q Consensus       569 ---GAd~n~~dd~~~~d~~G~TPLhlAa  593 (885)
                         |++++..+      ..|.+|+..+.
T Consensus       175 ~~~ga~~~~~~------~~g~~~~~~~~  196 (664)
T PTZ00322        175 FELGANAKPDS------FTGKPPSLEDS  196 (664)
T ss_pred             cccCCCCCccc------cCCCCccchhh
Confidence               66665544      56777665544

>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold

Probab=99.09  E-value=3.5e-10  Score=100.20  Aligned_cols=83  Identities=22%  Similarity=0.370  Sum_probs=74.1

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCccccee-eeecCeEEeecCCCCCcceeEEEEeCCCccc
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAE-VLTDNVIRCQAPSHAAGRVPFYITGSNRLAC  386 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae-~v~~gvLrC~~Pph~~G~V~l~Vt~~n~~~~  386 (885)
                      .|++|+|.|++..||++|+|.|.+|..    ....+.|+||+...+.. +++++.|+|..|++.+|.+++.|..++...+
T Consensus         2 ~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~~   77 (85)
T PF01833_consen    2 VITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQIY   77 (85)
T ss_dssp             EEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEEE
T ss_pred             EEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCeE
Confidence            699999999999999999999977722    35689999999999988 9999999999999999999999999987888


Q ss_pred             ccceeeec
Q 002751          387 SEVREFEY  394 (885)
Q Consensus       387 Sev~~FeY  394 (885)
                      ++...|+|
T Consensus        78 ~~~~~F~Y   85 (85)
T PF01833_consen   78 SNNTSFTY   85 (85)
T ss_dssp             EEEEEEEE
T ss_pred             ECCeeeEC
Confidence            99999998

These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.02  E-value=4.5e-10  Score=125.81  Aligned_cols=104  Identities=28%  Similarity=0.237  Sum_probs=90.1

Q ss_pred             HHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcC
Q 002751          517 VHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG  596 (885)
Q Consensus       517 LH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G  596 (885)
                      |.-|+..|..++|+-.+..--|+...+..|-||||-|+..||.+||++||+.|+++|+.|      .+||||||+|+.++
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~D------SdGWTPLHCAASCN  627 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAAD------SDGWTPLHCAASCN  627 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCcc------CCCCchhhhhhhcC
Confidence            345888899999999999888999999999999999999999999999999999999988      79999999999999


Q ss_pred             cHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751          597 HKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA  631 (885)
Q Consensus       597 ~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~  631 (885)
                      +.-+++.|++.|+.+....+    .+ +.||++.|
T Consensus       628 nv~~ckqLVe~GaavfAsTl----SD-meTa~eKC  657 (752)
T KOG0515|consen  628 NVPMCKQLVESGAAVFASTL----SD-METAAEKC  657 (752)
T ss_pred             chHHHHHHHhccceEEeeec----cc-ccchhhhc
Confidence            99999999999966554333    12 44555554

>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)

Probab=99.01  E-value=1.7e-09  Score=97.15  Aligned_cols=83  Identities=20%  Similarity=0.315  Sum_probs=70.3

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCC-CCcceeEEEEeCCCccc
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRLAC  386 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph-~~G~V~l~Vt~~n~~~~  386 (885)
                      .|++|+|..|+..|||+|+|.|.+|..     .....|+||+.+.....+.+..|.|.+||+ .+|.|+|.|..++... 
T Consensus         2 ~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~~~-   75 (85)
T cd01179           2 SITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGARR-   75 (85)
T ss_pred             eeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCccc-
Confidence            699999999999999999999988853     345899999997777677899999999998 6799999999887643 


Q ss_pred             ccceeeeccc
Q 002751          387 SEVREFEYRE  396 (885)
Q Consensus       387 Sev~~FeYr~  396 (885)
                      +....|+|.+
T Consensus        76 ~~~~~F~Y~~   85 (85)
T cd01179          76 LAPLVFTYTE   85 (85)
T ss_pred             CCCccEEEeC
Confidence            4456899974

Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.01  E-value=2.7e-10  Score=135.41  Aligned_cols=151  Identities=19%  Similarity=0.042  Sum_probs=129.4

Q ss_pred             HHhHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHH
Q 002751          488 RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF-RDARGRTALHWASYFGREETVIMLV  566 (885)
Q Consensus       488 ~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~-~D~~G~TPLH~Aa~~G~~eiV~~LL  566 (885)
                      +...++.++++|+.+|+++..+|+.|.+||.+|+-.||..+|+.|+.+.+++.. .|+.+.|+|.+||..|+.++|++||
T Consensus       765 caggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl  844 (2131)
T KOG4369|consen  765 CAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLL  844 (2131)
T ss_pred             ccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHH
Confidence            455678888999999999999999999999999999999999999999999987 4778999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751          567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV  644 (885)
Q Consensus       567 ~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a  644 (885)
                      .+|++-..++      ....|||.+|...|+.+|+.+|+.+|..++-..-.-.+-.+...|...++...+..|++.+.
T Consensus       845 ~~gankehrn------vsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gs  916 (2131)
T KOG4369|consen  845 NAGANKEHRN------VSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGS  916 (2131)
T ss_pred             Hhhccccccc------hhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccc
Confidence            9999877666      57799999999999999999999999444433322222233457888889999999998886

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.96  E-value=2.3e-09  Score=126.59  Aligned_cols=118  Identities=26%  Similarity=0.269  Sum_probs=102.1

Q ss_pred             HHHHHHHhHHHHHHHHHHhCCCCCCcc--------CC---------------CCCcHHHHHHHcCChhhHHHHHhCCCCC
Q 002751          483 IQNLLRNRLCEWLVWKIHEGGKGPNVI--------DD---------------GGQGVVHLAAALGYEWAMRPIIATGVSP  539 (885)
Q Consensus       483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~--------D~---------------~G~TpLH~AA~~G~~~iV~~LL~~Gadi  539 (885)
                      +|-++.+.. ..+|++|++.|||++.+        +.               .|..||-+||-.+..+++++|+++|||+
T Consensus       188 LHiAIv~~~-~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~  266 (782)
T KOG3676|consen  188 LHIAIVNRD-AELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADP  266 (782)
T ss_pred             HHHHHHhcc-HHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCC
Confidence            444444443 44688999999999862        11               2678999999999999999999999999


Q ss_pred             CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q 002751          540 NFRDARGRTALHWASYFGREETVIMLVKLGAA--PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA  607 (885)
Q Consensus       540 n~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd--~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~  607 (885)
                      |++|.+|+|.||..+.+-..++-.++|++|++  ...++      ..|-|||-+|+..|..++.+.+++.
T Consensus       267 ~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N------~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  267 NAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRN------NQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             CccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccc------cCCCChHHHHHHhhhHHHHHHHHHh
Confidence            99999999999999999888999999999999  55554      7999999999999999999999997

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=98.93  E-value=3.2e-09  Score=111.90  Aligned_cols=121  Identities=19%  Similarity=0.148  Sum_probs=101.1

Q ss_pred             CCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHH
Q 002751          512 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADL  591 (885)
Q Consensus       512 ~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhl  591 (885)
                      .-..||.-+...|..+....||..--++|.+|..|.|+|..|++.|+.++|++||+.|||+|...+     ..+.||||+
T Consensus        11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qh-----g~~YTpLmF   85 (396)
T KOG1710|consen   11 APKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQH-----GTLYTPLMF   85 (396)
T ss_pred             chhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccc-----cccccHHHH
Confidence            345788889999999999999987667999999999999999999999999999999999998764     788999999


Q ss_pred             HHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHH----hhHHHHHHHHHcC
Q 002751          592 ASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIG  643 (885)
Q Consensus       592 Aa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~----~~~~~ve~Ll~~~  643 (885)
                      |+..|+.++.++|++.|+.     +.+-+.- |++|+..    |+.+.|..+-.+.
T Consensus        86 AALSGn~dvcrllldaGa~-----~~~vNsv-grTAaqmAAFVG~H~CV~iINN~~  135 (396)
T KOG1710|consen   86 AALSGNQDVCRLLLDAGAR-----MYLVNSV-GRTAAQMAAFVGHHECVAIINNHI  135 (396)
T ss_pred             HHHcCCchHHHHHHhccCc-----cccccch-hhhHHHHHHHhcchHHHHHHhccc
Confidence            9999999999999999944     4444454 6666554    4567777665443

>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT)

Probab=98.90  E-value=7.9e-09  Score=92.62  Aligned_cols=83  Identities=24%  Similarity=0.344  Sum_probs=68.7

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEee-CCcccceeeeecCeEEeecCCCCC---cceeEEEEeCCC
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF-GEIEVPAEVLTDNVIRCQAPSHAA---GRVPFYITGSNR  383 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~F-Gd~~Vpae~v~~gvLrC~~Pph~~---G~V~l~Vt~~n~  383 (885)
                      .|+.|+|.+++..||++|+|.|.+|..     ...+.|+| |+.......+.+..|.|.+|++..   |.|.|+|...+.
T Consensus         2 ~I~~i~P~~g~~~GGt~itI~G~~f~~-----~~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~   76 (89)
T cd00102           2 VITSISPSSGPVSGGTEVTITGSNFGS-----GSNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGNG   76 (89)
T ss_pred             EEeEEECCcCCCCCCeEEEEEEECCCC-----CCcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCCC
Confidence            699999999999999999999977753     22699999 898777777899999999999743   888888876553


Q ss_pred             cccccceeeecc
Q 002751          384 LACSEVREFEYR  395 (885)
Q Consensus       384 ~~~Sev~~FeYr  395 (885)
                      ...+....|+|.
T Consensus        77 ~~~~~~~~F~Y~   88 (89)
T cd00102          77 GITSSPLTFTYV   88 (89)
T ss_pred             cccCCCccEEee
Confidence            345777889986

IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=98.80  E-value=2.4e-09  Score=127.60  Aligned_cols=148  Identities=14%  Similarity=0.076  Sum_probs=121.9

Q ss_pred             HHHHHHHHHhCCCCCCc-cCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002751          492 CEWLVWKIHEGGKGPNV-IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGA  570 (885)
Q Consensus       492 ~e~Lv~~Lle~Gadin~-~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GA  570 (885)
                      +..+|+.|+.+.++++. .|..+.|+|-+||..|..++|++||.+|++-..++-..+|||.+|...|..+++.+||.+|+
T Consensus       802 h~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~Gs  881 (2131)
T KOG4369|consen  802 HITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGS  881 (2131)
T ss_pred             chHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccc
Confidence            45567778888888876 57789999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751          571 APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV  644 (885)
Q Consensus       571 d~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve~Ll~~~a  644 (885)
                      .+|.++.    ...|..||.+|..+||...+..|++.|-+.+..--+-++.. .-+++-.|..++|.+|+...+
T Consensus       882 eInSrtg----SklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTa-ltla~fqgr~evv~lLLa~~a  950 (2131)
T KOG4369|consen  882 EINSRTG----SKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTA-LTLALFQGRPEVVFLLLAAQA  950 (2131)
T ss_pred             ccccccc----cccCcchhhhhhhccccHHHHHHhcccchhccccccccccc-eeeccccCcchHHHHHHHHhh
Confidence            9987762    36889999999999999999999999955443322222332 335666677888888888775

>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins

Probab=98.61  E-value=2.1e-07  Score=84.07  Aligned_cols=84  Identities=20%  Similarity=0.294  Sum_probs=64.2

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCC-CCcceeEEEEeCCCc--
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRL--  384 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph-~~G~V~l~Vt~~n~~--  384 (885)
                      .|+.|+|.+|+..|||.|+|.|.+|...    .....|.||+.+.....+.+..|.|.+|+. .+|..++.|..++..  
T Consensus         2 ~I~~i~P~~g~~~Ggt~vtI~G~~f~~~----~~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~~   77 (90)
T cd00603           2 VITSISPSSGPLSGGTRLTITGSNLGSG----SPRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANVS   77 (90)
T ss_pred             eEEEEcCCCCCCCCCeEEEEEEECCCCC----CceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCcccc
Confidence            6999999999999999999999777532    147999999997776677899999999997 443445555554443  


Q ss_pred             -ccccceeeecc
Q 002751          385 -ACSEVREFEYR  395 (885)
Q Consensus       385 -~~Sev~~FeYr  395 (885)
                       ..+....|+|.
T Consensus        78 ~~~~~~~~F~Y~   89 (90)
T cd00603          78 ARVLSNTTFTYV   89 (90)
T ss_pred             ccccCCcceEEe
Confidence             24555678885

This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.61  E-value=1e-07  Score=106.70  Aligned_cols=95  Identities=29%  Similarity=0.383  Sum_probs=85.7

Q ss_pred             CCccCCCCCcH------HHHHHHcCChhhHHHHHhCCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 002751          506 PNVIDDGGQGV------VHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGREETVIMLVKLGAAPGAVEDP  578 (885)
Q Consensus       506 in~~D~~G~Tp------LH~AA~~G~~~iV~~LL~~Gadin~~D~~-G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~  578 (885)
                      +..+|.+|-|.      ||-.++.|+.+.+--||..|+++|+.+.. |.||||.||..|+.--+++|+-+|||++..|  
T Consensus       120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d--  197 (669)
T KOG0818|consen  120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQD--  197 (669)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCC--
Confidence            34567777664      89999999999998899999999998765 9999999999999999999999999999988  


Q ss_pred             CCCCCCCCcHHHHHHhcCcHHHHHHHHH
Q 002751          579 TPAFPGGQTAADLASSRGHKGIAGYLAE  606 (885)
Q Consensus       579 ~~~d~~G~TPLhlAa~~G~~eiv~lLLe  606 (885)
                          .+|.||+.+|...||.++++.|++
T Consensus       198 ----~~GmtP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  198 ----SSGMTPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             ----CCCCcHHHHHHhcCchHHHHHHHH
Confidence                799999999999999999988887

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.60  E-value=1.8e-08  Score=117.95  Aligned_cols=83  Identities=24%  Similarity=0.371  Sum_probs=78.0

Q ss_pred             CCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 002751          506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPG  584 (885)
Q Consensus       506 in~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~-G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~  584 (885)
                      .|.+|..|+|+||+|+..|...++++||.+|++++.+|.. ||||||-|..+|+.+|+-+||.+|+...++|      .+
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~D------ke  118 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKD------KE  118 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEec------cc
Confidence            5789999999999999999999999999999999999986 9999999999999999999999999888877      79


Q ss_pred             CCcHHHHHHh
Q 002751          585 GQTAADLASS  594 (885)
Q Consensus       585 G~TPLhlAa~  594 (885)
                      |..||++-++
T Consensus       119 glsplq~~~r  128 (1267)
T KOG0783|consen  119 GLSPLQFLSR  128 (1267)
T ss_pred             CCCHHHHHhh
Confidence            9999998776

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=98.56  E-value=7.3e-07  Score=108.30  Aligned_cols=130  Identities=21%  Similarity=0.245  Sum_probs=98.9

Q ss_pred             hhhhhcccchhhhhh--hhhHHHHHHHHHHhhhhhhhhhccc--CCchHHHHHHHHHhhccccccchhh-----------
Q 002751          651 AEQLSLRGSLAAVRK--SAHAAALIQQAFRVRSFRHRQSIQS--SDDVSEVSVDLVALGSLNKVSKMIH-----------  715 (885)
Q Consensus       651 ~~qlslkdsLaAvR~--A~~AA~rIQ~aFR~~s~R~r~L~~~--~~d~~e~~~sila~~~l~k~~~~~~-----------  715 (885)
                      -.||..-..|.++|.  ++++.+..+..|.   .||+.|...  ..+....|..++.. .....++-+.           
T Consensus       587 ~~Qlr~~GvLetiRiS~~g~P~r~~~~Ef~---~r~~~L~~~~~~~~~~~~~~~il~~-~~~~~yq~g~tkif~r~gq~~  662 (862)
T KOG0160|consen  587 LQQLRCCGVLETIRISCAGFPTRWTFIEFV---NRYGILMPNDSASDDLSLCKVILEK-LGLELYQIGKTKIFLRAGQIA  662 (862)
T ss_pred             eeeccccceehhheeccccCCccccHHHHH---HHHhhcCcchhcccchHHHHHHHHH-hchhceeeeeeeeeeccchhH
Confidence            456777777888875  6889999999999   899988761  23347788888873 2211111111           


Q ss_pred             -H----HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002751          716 -F----EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGS  785 (885)
Q Consensus       716 -~----~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~i~rwrrkr~  785 (885)
                       +    ......+++.||+.+|||..||.|.++|+.++.||+.+||+++|++.. ..++++.+|+..+.|..+++
T Consensus       663 ~le~~R~~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~~  736 (862)
T KOG0160|consen  663 VLEARRSDVLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRRR  736 (862)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHHH
Confidence             1    225677888899999999999999999999999999999999999555 67788889999988865543

>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)

Probab=98.55  E-value=3.1e-07  Score=84.19  Aligned_cols=87  Identities=22%  Similarity=0.296  Sum_probs=67.3

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc-ccce--eeeecCeEEeecCCCC-C-cceeEEEEeCC
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPA--EVLTDNVIRCQAPSHA-A-GRVPFYITGSN  382 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~-~Vpa--e~v~~gvLrC~~Pph~-~-G~V~l~Vt~~n  382 (885)
                      .|+.|+|..||..|||+|+|+|.+|....  +.....|++|+. +.+.  .......|.|.+||+. + +.++|.|..++
T Consensus         2 ~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~--~~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~~   79 (94)
T cd01180           2 VITEFFPLSGPLEGGTRLTICGSNLGLRK--NDVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVGH   79 (94)
T ss_pred             eeEEEeCCCCCCCCCEEEEEEEEcCCCCc--ccceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEECC
Confidence            69999999999999999999998886422  124678999999 3332  3567889999999984 3 78888888877


Q ss_pred             Cc-ccccceeeeccc
Q 002751          383 RL-ACSEVREFEYRE  396 (885)
Q Consensus       383 ~~-~~Sev~~FeYr~  396 (885)
                      .. .++.-..|+|.+
T Consensus        80 ~~~~~~~~~~F~Y~~   94 (94)
T cd01180          80 GSFRTESSEGFSFVD   94 (94)
T ss_pred             ceecccccCceEEeC
Confidence            53 455567888864

Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.51  E-value=8.6e-08  Score=106.91  Aligned_cols=93  Identities=30%  Similarity=0.285  Sum_probs=84.9

Q ss_pred             CCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCcH
Q 002751          510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL-GAAPGAVEDPTPAFPGGQTA  588 (885)
Q Consensus       510 D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAd~n~~dd~~~~d~~G~TP  588 (885)
                      +.++...+++||..|....++-+.-.|.|++.+|.+.+|+||.||..|+.+++++||+. +.+++.+|      .+|+||
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kD------Rw~rtP  576 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKD------RWGRTP  576 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhh------ccCCCc
Confidence            34577889999999999999999999999999999999999999999999999999975 66776665      899999


Q ss_pred             HHHHHhcCcHHHHHHHHHcC
Q 002751          589 ADLASSRGHKGIAGYLAEAD  608 (885)
Q Consensus       589 LhlAa~~G~~eiv~lLLe~G  608 (885)
                      |+-|...+|.+++++|-+.-
T Consensus       577 lDdA~~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  577 LDDAKHFKHKEVVKLLEEAQ  596 (622)
T ss_pred             chHhHhcCcHHHHHHHHHHh
Confidence            99999999999999998865

>smart00429 IPT ig-like, plexins, transcription factors

Probab=98.49  E-value=5e-07  Score=81.55  Aligned_cols=84  Identities=24%  Similarity=0.261  Sum_probs=65.2

Q ss_pred             eEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeee--ecCeEEeecCCC--CCcceeE-EEEeC
Q 002751          307 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVL--TDNVIRCQAPSH--AAGRVPF-YITGS  381 (885)
Q Consensus       307 f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v--~~gvLrC~~Pph--~~G~V~l-~Vt~~  381 (885)
                      +.|+.|+|.+|+..|||+|+|+|.+|..     .....|.|+...+++.+.  .+..|.|.+|+.  .++.+++ .|...
T Consensus         2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~   76 (90)
T smart00429        2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR   76 (90)
T ss_pred             CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence            4799999999999999999999977753     456778888766777776  678999999995  5788888 77765


Q ss_pred             CCcccccceeeecc
Q 002751          382 NRLACSEVREFEYR  395 (885)
Q Consensus       382 n~~~~Sev~~FeYr  395 (885)
                      +...-++...|+|.
T Consensus        77 ~~~~~~~~~~f~y~   90 (90)
T smart00429       77 NGGVPSSPQPFTYV   90 (90)
T ss_pred             CCCccCcccCeEEC
Confidence            55443444567763

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.47  E-value=1.4e-06  Score=99.44  Aligned_cols=75  Identities=32%  Similarity=0.394  Sum_probs=62.4

Q ss_pred             HHHhCCCCC--Cc--cCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751          498 KIHEGGKGP--NV--IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP  572 (885)
Q Consensus       498 ~Lle~Gadi--n~--~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~  572 (885)
                      +|+.+|...  |.  .+.+|+|+||+||..|+..+.++|+.+|+|+..+|.+|+|||.||-..|..+|+.+|+.+|+..
T Consensus       642 lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~  720 (749)
T KOG0705|consen  642 LLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPD  720 (749)
T ss_pred             HHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence            466777543  32  3556889999999999999999999999999999999999999999999999999999998754

>PF13606 Ank_3: Ankyrin repeat

Probab=98.37  E-value=4.2e-07  Score=65.56  Aligned_cols=29  Identities=38%  Similarity=0.444  Sum_probs=20.3

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002751          545 RGRTALHWASYFGREETVIMLVKLGAAPG  573 (885)
Q Consensus       545 ~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n  573 (885)
                      +|+||||+||..|+.++|++||++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            36677777777777777777777777665

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=98.37  E-value=4.9e-06  Score=96.89  Aligned_cols=118  Identities=14%  Similarity=0.155  Sum_probs=84.2

Q ss_pred             hhhhhhhHHHHHHHHHHhhhhhhhhhcccC------CchHHHHHHHHHhhccccc-----------cchhh-H------H
Q 002751          662 AVRKSAHAAALIQQAFRVRSFRHRQSIQSS------DDVSEVSVDLVALGSLNKV-----------SKMIH-F------E  717 (885)
Q Consensus       662 AvR~A~~AA~rIQ~aFR~~s~R~r~L~~~~------~d~~e~~~sila~~~l~k~-----------~~~~~-~------~  717 (885)
                      .||.|++|-++.+..|.   .|||.+.++.      .++++.+..++.. ....+           ..++- |      +
T Consensus       617 rVrrAgfahRq~Y~~FL---~RYKmi~~~TWPn~~~g~dkd~v~vL~e~-~g~~~d~a~G~TKIFIRsPrTLF~lEe~r~  692 (1001)
T KOG0164|consen  617 RVRRAGFAHRQPYERFL---LRYKMICESTWPNWRGGSDKDGVKVLLEH-LGLAGDVAFGRTKIFIRSPRTLFALEEQRA  692 (1001)
T ss_pred             hhhhcccccccchHHHH---HHHHhhCcccCCCCCCCCchhHHHHHHHH-hccchhhhcCceeEEEecchhHhhHHHHHH
Confidence            35899999999999999   9999998752      2345666777663 11100           00000 1      3


Q ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 002751          718 DYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGLRGFR  791 (885)
Q Consensus       718 ~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~i~rwrrkr~~lr~~~  791 (885)
                      .++-.-++.|||.||||.+|.+|+++|++++.|+ +||.+.       +.+.+..|+..++.|++.|.--+.++
T Consensus       693 ~~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K-------~ks~v~el~~~~rg~k~~r~ygk~~~  758 (1001)
T KOG0164|consen  693 ERLPSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYK-------LKSYVQELQRRFRGAKQMRDYGKSIR  758 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-------HHHHHHHHHHHHHhhhhccccCCCCC
Confidence            3566789999999999999999999999999999 888443       34667778888888877655444333

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.29  E-value=9.1e-07  Score=64.98  Aligned_cols=32  Identities=38%  Similarity=0.539  Sum_probs=22.2

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 002751          545 RGRTALHWASYFGREETVIMLVKLGAAPGAVE  576 (885)
Q Consensus       545 ~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~d  576 (885)
                      +|+||||+||..|+.+++++||++|++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            36677777777777777777777777776655

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.26  E-value=3.7e-07  Score=107.25  Aligned_cols=81  Identities=25%  Similarity=0.255  Sum_probs=75.7

Q ss_pred             CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCcc
Q 002751          539 PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTV  618 (885)
Q Consensus       539 in~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~  618 (885)
                      .|.+|..|+|+||+|+..|..+++++||.+|++++.+|.     ..|+||||-|..+||.+|+-+||.+|     ..+.+
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~-----ESG~taLHRaiyyG~idca~lLL~~g-----~SL~i  114 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDE-----ESGYTALHRAIYYGNIDCASLLLSKG-----RSLRI  114 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccc-----cccchHhhHhhhhchHHHHHHHHhcC-----CceEE
Confidence            678999999999999999999999999999999999985     78999999999999999999999999     88888


Q ss_pred             ccCcchhHHHHH
Q 002751          619 NENGMDNVAAAL  630 (885)
Q Consensus       619 ~d~~~g~tAa~~  630 (885)
                      +|++ |..|++.
T Consensus       115 ~Dke-glsplq~  125 (1267)
T KOG0783|consen  115 KDKE-GLSPLQF  125 (1267)
T ss_pred             eccc-CCCHHHH
Confidence            8998 8877765

>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain

Probab=98.23  E-value=6.2e-06  Score=73.57  Aligned_cols=79  Identities=20%  Similarity=0.212  Sum_probs=67.2

Q ss_pred             eEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCCCCcceeEEEEeCCCccc
Q 002751          307 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLAC  386 (885)
Q Consensus       307 f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~~G~V~l~Vt~~n~~~~  386 (885)
                      +.|..++|.-|..  |++|+|.|..|.+      ..-.++||+.+.+...|+|..|.|.+|.+.+|..++.|.-.++.. 
T Consensus         3 P~I~~i~P~~g~~--G~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~~-   73 (81)
T cd02849           3 PLIGHVGPMMGKA--GNTVTISGEGFGS------APGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGAT-   73 (81)
T ss_pred             CEEeeEcCCCCCC--CCEEEEEEECCCC------CCcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCcc-
Confidence            4699999999987  8899999977753      235799999998988999999999999999999999999776665 


Q ss_pred             ccceeeec
Q 002751          387 SEVREFEY  394 (885)
Q Consensus       387 Sev~~FeY  394 (885)
                      |+...|+|
T Consensus        74 Sn~~~f~~   81 (81)
T cd02849          74 SNGYNFEV   81 (81)
T ss_pred             cCcEeeEC
Confidence            66666765

Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.23  E-value=5.3e-06  Score=94.79  Aligned_cols=90  Identities=23%  Similarity=0.189  Sum_probs=76.3

Q ss_pred             HHHHHHcCChhhHHHHHhCCCCC----CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002751          517 VHLAAALGYEWAMRPIIATGVSP----NFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA  592 (885)
Q Consensus       517 LH~AA~~G~~~iV~~LL~~Gadi----n~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA  592 (885)
                      |.-|........+-+||.+|...    ..-+.+|+||||+||..|+..+..+|+-+|+|+-++|      ..|+|||.||
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rd------a~g~t~l~ya  701 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARD------AHGRTALFYA  701 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecc------cCCchhhhhH
Confidence            44455566677778889988543    2456778999999999999999999999999998887      7999999999


Q ss_pred             HhcCcHHHHHHHHHcCCCCC
Q 002751          593 SSRGHKGIAGYLAEADLSSH  612 (885)
Q Consensus       593 a~~G~~eiv~lLLe~Ga~~~  612 (885)
                      ...|.-+|+.+|+.+|+...
T Consensus       702 r~a~sqec~d~llq~gcp~e  721 (749)
T KOG0705|consen  702 RQAGSQECIDVLLQYGCPDE  721 (749)
T ss_pred             hhcccHHHHHHHHHcCCCcc
Confidence            99999999999999996544

>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)

Probab=98.23  E-value=4.1e-06  Score=77.65  Aligned_cols=72  Identities=22%  Similarity=0.482  Sum_probs=56.8

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc-ccceeeeecCeEEeecCCCCC-------cceeEEEE
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNVIRCQAPSHAA-------GRVPFYIT  379 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~-~Vpae~v~~gvLrC~~Pph~~-------G~V~l~Vt  379 (885)
                      +|++++|.|+|..|||.|+|+|.+|..-   ....+.++||+. .++..+.++..+.|..|+...       +..++.+.
T Consensus         2 ~I~~i~P~~g~~SGGt~itV~G~~Lds~---q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~~   78 (99)
T cd01181           2 TITRIEPEWSFLSGGTPITVTGTNLNTV---QEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEFG   78 (99)
T ss_pred             EEEEeccCCCccCCCEEEEEEeeccCcc---cccEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEEE
Confidence            6999999999999999999999888642   345799999996 446667788999999999632       55566555


Q ss_pred             eCC
Q 002751          380 GSN  382 (885)
Q Consensus       380 ~~n  382 (885)
                      .+.
T Consensus        79 fd~   81 (99)
T cd01181          79 LDG   81 (99)
T ss_pred             Eec
Confidence            443

Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=98.21  E-value=4.1e-05  Score=96.11  Aligned_cols=107  Identities=21%  Similarity=0.277  Sum_probs=75.1

Q ss_pred             hhhhcccchhhh--hhhhhHHHHHHHHHHhhhhhhhhhcccC---------CchHHHHHHHHHhhccc--cccchhh---
Q 002751          652 EQLSLRGSLAAV--RKSAHAAALIQQAFRVRSFRHRQSIQSS---------DDVSEVSVDLVALGSLN--KVSKMIH---  715 (885)
Q Consensus       652 ~qlslkdsLaAv--R~A~~AA~rIQ~aFR~~s~R~r~L~~~~---------~d~~e~~~sila~~~l~--k~~~~~~---  715 (885)
                      +||.--..+..|  +.+++|.+..+..|+   .||+.|....         .+...+|..|+.- ..+  ..++.+.   
T Consensus       651 ~QLr~~GVlE~IRIsraGFP~R~~f~EFv---~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~-~~id~~~YqiG~TKv  726 (1463)
T COG5022         651 SQLRCCGVLETIRISRAGFPSRWTFDEFV---QRYRILSPSKSWTGEYTWKEDTKNAVKSILEE-LVIDSSKYQIGNTKV  726 (1463)
T ss_pred             HHHHhcchhhheeeccccCchhhhHHHHH---HHHHHhcccccccccccchhHHHHHHHHHHHh-hcCChhheeccceeE
Confidence            466666777777  468999999999999   9999997732         1246778888752 110  0111111   


Q ss_pred             H-------------HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 002751          716 F-------------EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQ  762 (885)
Q Consensus       716 ~-------------~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~  762 (885)
                      |             .......|+.||++|||+..||+|+...+.+..||...+|.+.|+.
T Consensus       727 FfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~  786 (1463)
T COG5022         727 FFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRL  786 (1463)
T ss_pred             EeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhh
Confidence            1             2357889999999999999999999987776666666666555543

>PF13606 Ank_3: Ankyrin repeat

Probab=98.20  E-value=1.4e-06  Score=62.84  Aligned_cols=30  Identities=27%  Similarity=0.338  Sum_probs=28.5

Q ss_pred             CCCcHHHHHHHcCChhhHHHHHhCCCCCCc
Q 002751          512 GGQGVVHLAAALGYEWAMRPIIATGVSPNF  541 (885)
Q Consensus       512 ~G~TpLH~AA~~G~~~iV~~LL~~Gadin~  541 (885)
                      +|+||||+||..|+.++|++||++|+|||.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            589999999999999999999999999984

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.20  E-value=3.2e-06  Score=95.88  Aligned_cols=103  Identities=26%  Similarity=0.344  Sum_probs=92.7

Q ss_pred             HhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 002751          500 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS--PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED  577 (885)
Q Consensus       500 le~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gad--in~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd  577 (885)
                      ...|.++-.++.+..+.||||+..|+-++|+++|++|..  ++..|..|.|+||-|+..++..++.+|++.||.....| 
T Consensus       886 h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd-  964 (1004)
T KOG0782|consen  886 HLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTD-  964 (1004)
T ss_pred             HhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecc-
Confidence            346778888899999999999999999999999999864  56788999999999999999999999999999886655 


Q ss_pred             CCCCCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q 002751          578 PTPAFPGGQTAADLASSRGHKGIAGYLAEAD  608 (885)
Q Consensus       578 ~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~G  608 (885)
                           ..|.||-.-|-..|..+++.||-.+.
T Consensus       965 -----~kg~tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  965 -----SKGKTPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             -----cCCCChHHHHHhcCCchHHHHHhhhh
Confidence                 79999999999999999999997654

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.19  E-value=1.7e-06  Score=63.51  Aligned_cols=33  Identities=27%  Similarity=0.352  Sum_probs=31.2

Q ss_pred             CCCcHHHHHHHcCChhhHHHHHhCCCCCCccCC
Q 002751          512 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA  544 (885)
Q Consensus       512 ~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~  544 (885)
                      +|.||||+||..|+.+++++||++|++++.+|.
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            589999999999999999999999999999874

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PTZ00014 myosin-A; Provisional

Probab=98.17  E-value=4.6e-06  Score=102.97  Aligned_cols=108  Identities=19%  Similarity=0.084  Sum_probs=80.5

Q ss_pred             hhhhhcccchhhh--hhhhhHHHHHHHHHHhhhhhhhhhccc-----CCchHHHHHHHHHhhcccc--ccchhh------
Q 002751          651 AEQLSLRGSLAAV--RKSAHAAALIQQAFRVRSFRHRQSIQS-----SDDVSEVSVDLVALGSLNK--VSKMIH------  715 (885)
Q Consensus       651 ~~qlslkdsLaAv--R~A~~AA~rIQ~aFR~~s~R~r~L~~~-----~~d~~e~~~sila~~~l~k--~~~~~~------  715 (885)
                      -.||..-..|.+|  |++++|.++.+..|+   .||+.|...     ..+.++.|..|+.. ..+.  .++-+.      
T Consensus       683 ~~QLr~~GvLE~iri~r~Gyp~R~~f~~F~---~rY~~L~~~~~~~~~~d~k~~~~~il~~-~~l~~~~~~iGkTKVFlr  758 (821)
T PTZ00014        683 LIQLHSLSILEALQLRQLGFSYRRTFAEFL---SQFKYLDLAVSNDSSLDPKEKAEKLLER-SGLPKDSYAIGKTMVFLK  758 (821)
T ss_pred             HHHhhhhhHHHHHHHHhcCCcccccHHHHH---HHHHhcCcccccCCCCCHHHHHHHHHHH-cCCCcccEEecCCeEEEc
Confidence            4567777777777  678999999999999   899988542     23567888888863 1100  011110      


Q ss_pred             ------H----HHH---HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 002751          716 ------F----EDY---LHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQ  762 (885)
Q Consensus       716 ------~----~~~---~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~  762 (885)
                            .    +.+   ...+++.||+.||||+.||.|+++++++++||++||||.++++
T Consensus       759 ~~~~~~Le~~~~~~~~~~~~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        759 KDAAKELTQIQREKLAAWEPLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                  0    112   2357899999999999999999999999999999999999875

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.14  E-value=4.2e-06  Score=95.35  Aligned_cols=67  Identities=24%  Similarity=0.301  Sum_probs=53.3

Q ss_pred             CCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 002751          502 GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL  568 (885)
Q Consensus       502 ~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~  568 (885)
                      .+..++.+|..|.||||+|+..|+..+++.|+.+|+++..+|..||+|||-|+..|+..++..+|.+
T Consensus        44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~  110 (560)
T KOG0522|consen   44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH  110 (560)
T ss_pred             hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence            4556777888888888888888888888888888888888888888888888888888777666654

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=98.12  E-value=6.5e-05  Score=91.74  Aligned_cols=87  Identities=21%  Similarity=0.229  Sum_probs=66.5

Q ss_pred             hhHHHHHHHHHHhhhhhhhhhcccCCchHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 002751          667 AHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRNH  746 (885)
Q Consensus       667 ~~AA~rIQ~aFR~~s~R~r~L~~~~~d~~e~~~sila~~~l~k~~~~~~~~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~  746 (885)
                      ..++..||..+|.+..|++++..        ...++.+|+..++...++ ...+..||+.||+.+|+|..||.|+.++.+
T Consensus       673 ~~~~~~iq~~~r~~~~r~~f~~~--------r~~~~~~Q~~~rG~~~r~-~~~~~~aai~~q~~~r~~~~r~~y~~~~~~  743 (862)
T KOG0160|consen  673 SAAKVLIQRQIRGYLARKKFLQL--------RSAVIIIQAYSRGVLARR-ETEREAAAIGIQKECRSYLNRRRYRALIPA  743 (862)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHhhhhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            45667799999999999887433        333333344555555554 233888999999999999999999999999


Q ss_pred             HHHHHHHHhhHHHHHH
Q 002751          747 IVKLQAHVRGHQVRKQ  762 (885)
Q Consensus       747 aI~IQa~~RG~~aRk~  762 (885)
                      +++||+.+||+.+|++
T Consensus       744 ~~~~qs~~r~~~~r~e  759 (862)
T KOG0160|consen  744 SITIQSGVRAMLARNE  759 (862)
T ss_pred             HHHHHHHHHHHHhccc
Confidence            9999999999999973

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.12  E-value=7e-06  Score=92.34  Aligned_cols=82  Identities=23%  Similarity=0.263  Sum_probs=69.9

Q ss_pred             HHHHHhHHHHHHHHHHhCCCCCCccCC-CCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHH
Q 002751          485 NLLRNRLCEWLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVI  563 (885)
Q Consensus       485 ~aL~~~l~e~Lv~~Lle~Gadin~~D~-~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~  563 (885)
                      ..+.....+..++ |+..|+++|..+. .|.||||.||..|..--+++|+-+|+|++..|.+|.||+-||-..||-++.+
T Consensus       139 asvRt~nlet~LR-ll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~lae  217 (669)
T KOG0818|consen  139 SSVRTGNLETCLR-LLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAE  217 (669)
T ss_pred             HHhhcccHHHHHH-HHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHH
Confidence            3334444455454 6778999999875 6999999999999999999999999999999999999999999999999887


Q ss_pred             HHHH
Q 002751          564 MLVK  567 (885)
Q Consensus       564 ~LL~  567 (885)
                      -|++
T Consensus       218 Rl~e  221 (669)
T KOG0818|consen  218 RLVE  221 (669)
T ss_pred             HHHH
Confidence            7765

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.00  E-value=9.6e-06  Score=92.51  Aligned_cols=88  Identities=23%  Similarity=0.234  Sum_probs=75.1

Q ss_pred             cHHHHHHHcCChhhHHH--HHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002751          515 GVVHLAAALGYEWAMRP--IIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA  592 (885)
Q Consensus       515 TpLH~AA~~G~~~iV~~--LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA  592 (885)
                      -|||+++.....+-+..  +.+.+..|+.+|..|.||||+|+..|+.+.++.|+.+||++..++      ..|++|||-|
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN------~~gWs~L~EA   95 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKN------NEGWSPLHEA   95 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccc------cccccHHHHH
Confidence            45999998877665544  334567889999999999999999999999999999999998888      6999999999


Q ss_pred             HhcCcHHHHHHHHHcC
Q 002751          593 SSRGHKGIAGYLAEAD  608 (885)
Q Consensus       593 a~~G~~eiv~lLLe~G  608 (885)
                      +..|+..++..++.+-
T Consensus        96 v~~g~~q~i~~vlr~~  111 (560)
T KOG0522|consen   96 VSTGNEQIITEVLRHL  111 (560)
T ss_pred             HHcCCHHHHHHHHHHh
Confidence            9999998877766543

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.98  E-value=1.8e-05  Score=79.96  Aligned_cols=66  Identities=35%  Similarity=0.333  Sum_probs=41.5

Q ss_pred             CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q 002751          536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLG-AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA  607 (885)
Q Consensus       536 Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~G-Ad~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~  607 (885)
                      +.+||.+|..||||||.|+..|..+.|.+|+.+| +.+...+      ..|.+++.+|-+.|+.+++..|-+.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d------~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTD------ESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccc------cccchHHHHHHhcChHHHHHHHHHH
Confidence            3456666666666666666666666666666666 5555544      5666666666666666666666554

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.95  E-value=6.4e-06  Score=100.94  Aligned_cols=99  Identities=29%  Similarity=0.367  Sum_probs=88.0

Q ss_pred             CCCCCCcc--CCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 002751          502 GGKGPNVI--DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPT  579 (885)
Q Consensus       502 ~Gadin~~--D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~  579 (885)
                      .|+++|..  -..|.|+||.|+..|..-++++|++.|+++|.+|..|+||||.+...|+...+..|+++||++++.+   
T Consensus       643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~---  719 (785)
T KOG0521|consen  643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFD---  719 (785)
T ss_pred             chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccC---
Confidence            45555543  2468999999999999999999999999999999999999999999999999999999999999988   


Q ss_pred             CCCCCCCcHHHHHHhcCcHHHHHHHHH
Q 002751          580 PAFPGGQTAADLASSRGHKGIAGYLAE  606 (885)
Q Consensus       580 ~~d~~G~TPLhlAa~~G~~eiv~lLLe  606 (885)
                         ..|.+||++|....+.+++-+|.-
T Consensus       720 ---~~~~~~l~~a~~~~~~d~~~l~~l  743 (785)
T KOG0521|consen  720 ---PDGKLPLDIAMEAANADIVLLLRL  743 (785)
T ss_pred             ---ccCcchhhHHhhhccccHHHHHhh
Confidence               799999999988888887776654

>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes

Probab=97.87  E-value=8.2e-05  Score=66.42  Aligned_cols=79  Identities=23%  Similarity=0.239  Sum_probs=66.3

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCCCCcceeEEEEeCCCcccc
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACS  387 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~~G~V~l~Vt~~n~~~~S  387 (885)
                      .|..++|.-|.  -|+.|+|.|..|.+      ..-.|+||+.+.+...|+|..|.|.+|.+.+|...+.|.-.++.. |
T Consensus         2 ~I~~i~P~~g~--pG~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G~~-S   72 (81)
T cd00604           2 LIGSVGPVMGK--PGNTVTISGEGFGS------TGGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDGVT-S   72 (81)
T ss_pred             eEeeEcCCCCC--CCCEEEEEEECCCC------CccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCCcc-c
Confidence            58899998887  68899999977753      134699999998888899999999999999999999999766665 6


Q ss_pred             cceeeecc
Q 002751          388 EVREFEYR  395 (885)
Q Consensus       388 ev~~FeYr  395 (885)
                      +...|+|.
T Consensus        73 n~~~f~~l   80 (81)
T cd00604          73 NGYNFEVL   80 (81)
T ss_pred             CcEeEEEc
Confidence            66678874

These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=97.83  E-value=1.4e-05  Score=89.74  Aligned_cols=74  Identities=26%  Similarity=0.283  Sum_probs=67.6

Q ss_pred             HHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002751          497 WKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGREETVIMLVKLGA  570 (885)
Q Consensus       497 ~~Lle~Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~-Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GA  570 (885)
                      +.+.-.|.|++.+|.+.+|+||.||..|+.+++++||+. +++++.+|++|+|||--|..++|.+++++|-++-.
T Consensus       523 rRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  523 RRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY  597 (622)
T ss_pred             HHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence            444456899999999999999999999999999999975 99999999999999999999999999999987644

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.68  E-value=7.1e-05  Score=82.22  Aligned_cols=85  Identities=25%  Similarity=0.218  Sum_probs=66.9

Q ss_pred             CcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751          514 QGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS  593 (885)
Q Consensus       514 ~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa  593 (885)
                      ..-|..||+.|..+.|+.|++.|++||.+|.....||.+|+.+||.++|++||++||-...-+      ..|.-+ |+++
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdt------f~G~RC-~Yga  109 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDT------FDGDRC-HYGA  109 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccc------cCcchh-hhhh
Confidence            456889999999999999999999999999999999999999999999999999999554322      455544 3444


Q ss_pred             hcCcHHHHHHHHHc
Q 002751          594 SRGHKGIAGYLAEA  607 (885)
Q Consensus       594 ~~G~~eiv~lLLe~  607 (885)
                      .+  ..|-++|+.+
T Consensus       110 Ln--d~IR~mllsy  121 (516)
T KOG0511|consen  110 LN--DRIRRMLLSY  121 (516)
T ss_pred             hh--HHHHHHHHHH
Confidence            43  2444555554

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.60  E-value=7.4e-05  Score=49.41  Aligned_cols=19  Identities=32%  Similarity=0.471  Sum_probs=10.3

Q ss_pred             HHHHHHHHHHhhHHHHHHH
Q 002751          745 NHIVKLQAHVRGHQVRKQY  763 (885)
Q Consensus       745 ~~aI~IQa~~RG~~aRk~y  763 (885)
                      +++|+||++|||+++|++|
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            3455555555555555555

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.56  E-value=0.00013  Score=73.76  Aligned_cols=70  Identities=20%  Similarity=0.083  Sum_probs=65.6

Q ss_pred             CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhCC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751          503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP  572 (885)
Q Consensus       503 Gadin~~D~~G~TpLH~AA~~G~~~iV~~LL~~G-adin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~  572 (885)
                      +.++|.+|..|+|+|+.||..|..+.|.+|+.+| +.|...|..|.+++.+|-..|+.++|..|.+.-.+-
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et   72 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET   72 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence            5689999999999999999999999999999999 999999999999999999999999999999874443

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=97.50  E-value=0.00029  Score=84.80  Aligned_cols=103  Identities=18%  Similarity=0.067  Sum_probs=87.5

Q ss_pred             CCCCccCCCCCcHHHHHHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CCCCCC
Q 002751          504 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPG----AVEDPT  579 (885)
Q Consensus       504 adin~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n----~~dd~~  579 (885)
                      .++|..|.-|+++||.|...-+.+++++|++++..+  .     -+|-+|...|..++|++++.+-....    ..+.+.
T Consensus        53 lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--g-----dALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~  125 (822)
T KOG3609|consen   53 LNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--G-----DALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANS  125 (822)
T ss_pred             cchhccChHhhhceecccccccHHHHHHHhcCcccc--c-----hHHHHHHHHHHHHHHHHHHhcccccchhccccccCc
Confidence            578899999999999999999999999999998776  2     38999999999999999998743321    233345


Q ss_pred             CCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 002751          580 PAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL  613 (885)
Q Consensus       580 ~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~  613 (885)
                      +....+.|||.+||..++.+|+++|+.+|+..+.
T Consensus       126 ~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen  126 PHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI  159 (822)
T ss_pred             ccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence            6667889999999999999999999999977665

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.41  E-value=0.00017  Score=47.69  Aligned_cols=21  Identities=43%  Similarity=0.593  Sum_probs=19.2

Q ss_pred             HHHHHHHHHHhhhhHHHHHHH
Q 002751          721 HFAAIKIQQKYRGWKGRKDFL  741 (885)
Q Consensus       721 ~~AAv~IQk~~Rg~~~Rk~f~  741 (885)
                      +.||+.||+.||||++|++|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            369999999999999999985

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=97.41  E-value=0.00022  Score=81.47  Aligned_cols=100  Identities=19%  Similarity=0.221  Sum_probs=78.3

Q ss_pred             HHHcCChhhHHHHHhCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCCCCCCcHHHHHHhcCc
Q 002751          520 AAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA--PGAVEDPTPAFPGGQTAADLASSRGH  597 (885)
Q Consensus       520 AA~~G~~~iV~~LL~~Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd--~n~~dd~~~~d~~G~TPLhlAa~~G~  597 (885)
                      |+..+..--+.-+-..|.++-.++.+.+|-||+|+..|+.++|+++|++|..  .+..+      ..|.|+||-|+..++
T Consensus       873 av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~d------e~get~lhkaa~~~~  946 (1004)
T KOG0782|consen  873 AVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMAD------ETGETALHKAACQRN  946 (1004)
T ss_pred             HHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHh------hhhhHHHHHHHHhcc
Confidence            4444433333334456888889999999999999999999999999999863  23333      799999999999999


Q ss_pred             HHHHHHHHHcCCCCCCcCCccccCcchhHHHHHh
Q 002751          598 KGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA  631 (885)
Q Consensus       598 ~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~  631 (885)
                      ..+..+|++.|     +.+.-.|.. |+++-+.+
T Consensus       947 r~vc~~lvdag-----asl~ktd~k-g~tp~era  974 (1004)
T KOG0782|consen  947 RAVCQLLVDAG-----ASLRKTDSK-GKTPQERA  974 (1004)
T ss_pred             hHHHHHHHhcc-----hhheecccC-CCChHHHH
Confidence            99999999999     566666666 77776654

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.11  E-value=0.00069  Score=74.68  Aligned_cols=60  Identities=27%  Similarity=0.210  Sum_probs=54.7

Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 002751          548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL  613 (885)
Q Consensus       548 TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~  613 (885)
                      --|..||+.|..+.|+.|++.|.++|.+|      .....||.+|+..||..+|++|+++|+-...
T Consensus        38 ~elceacR~GD~d~v~~LVetgvnVN~vD------~fD~spL~lAsLcGHe~vvklLLenGAiC~r   97 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETGVNVNAVD------RFDSSPLYLASLCGHEDVVKLLLENGAICSR   97 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhCCCcchhh------cccccHHHHHHHcCcHHHHHHHHHcCCcccc
Confidence            35899999999999999999999999988      7889999999999999999999999955433

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=96.98  E-value=0.00051  Score=84.59  Aligned_cols=77  Identities=27%  Similarity=0.317  Sum_probs=65.4

Q ss_pred             hCCCCCCcc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCC
Q 002751          534 ATGVSPNFR--DARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSS  611 (885)
Q Consensus       534 ~~Gadin~~--D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~  611 (885)
                      .+|+++|..  -..|+|+||.|+..|...++++|++.|+++|..+      ..|+||||.+...|+...+.+|+++|++.
T Consensus       642 ~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d------~~g~~plh~~~~~g~~~~~~~ll~~~a~~  715 (785)
T KOG0521|consen  642 AHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALD------SKGRTPLHHATASGHTSIACLLLKRGADP  715 (785)
T ss_pred             cchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhh------ccCCCcchhhhhhcccchhhhhccccccc
Confidence            345666643  3458999999999999999999999999999888      89999999999999999999999999555


Q ss_pred             CCcCC
Q 002751          612 HLSSL  616 (885)
Q Consensus       612 ~~~~l  616 (885)
                      +..+.
T Consensus       716 ~a~~~  720 (785)
T KOG0521|consen  716 NAFDP  720 (785)
T ss_pred             cccCc
Confidence            54443

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]

Probab=96.90  E-value=0.027  Score=74.87  Aligned_cols=109  Identities=22%  Similarity=0.269  Sum_probs=74.1

Q ss_pred             hhhhhcccchhhhhh--hhhHHHHHHHHHHhhhhhhhhhccc-----CCchHHHHHHHHHhhcccc--ccchhh---H--
Q 002751          651 AEQLSLRGSLAAVRK--SAHAAALIQQAFRVRSFRHRQSIQS-----SDDVSEVSVDLVALGSLNK--VSKMIH---F--  716 (885)
Q Consensus       651 ~~qlslkdsLaAvR~--A~~AA~rIQ~aFR~~s~R~r~L~~~-----~~d~~e~~~sila~~~l~k--~~~~~~---~--  716 (885)
                      -+||.-...|..+|.  .++|.++.+..||   .||..+...     -.+....|..++.- ....  .+..+.   |  
T Consensus       682 l~QLrcngVLEgIRicR~GfPnr~~~~eFr---qRy~lla~~~~~~~~~d~k~~~~~~~~~-l~~d~~lyriG~tKvFfk  757 (1930)
T KOG0161|consen  682 LNQLRCNGVLEGIRICRQGFPNRMPFQEFR---QRYELLAADEPKKGFSDGKKACEKILEE-LLLDKNLYRIGHTKVFFK  757 (1930)
T ss_pred             HHHhhccCcHHHHHHHHhhCccccchHHHH---HhHHhhhhhhccccccccchhHHHHHHH-HhcccceEeecceeeeeh
Confidence            457777788888865  5899999999999   898844331     13335566666642 1100  011111   1  


Q ss_pred             -----------HHHHHHHHHHHHHHhhhhHHHHHHHHHHH---HHHHHHHHHhhHHHHHHH
Q 002751          717 -----------EDYLHFAAIKIQQKYRGWKGRKDFLKIRN---HIVKLQAHVRGHQVRKQY  763 (885)
Q Consensus       717 -----------~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~---~aI~IQa~~RG~~aRk~y  763 (885)
                                 ......--+.+|..+|||.+|+.|.+.+.   ++.+||..+|.|...|.+
T Consensus       758 aGvla~LEe~Rd~~ls~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~~~lr~w  818 (1930)
T KOG0161|consen  758 AGVLAHLEEMRDEKLSQIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAYLKLRTW  818 (1930)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence                       22456667889999999999999988764   688999999988666643

>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=96.65  E-value=0.0086  Score=70.87  Aligned_cols=95  Identities=20%  Similarity=0.224  Sum_probs=71.4

Q ss_pred             hhhhhhhHHHHHHHHHHhhhhhhhhhccc-----CCchHHHHHHHHHhhccccccchhhH--------------------
Q 002751          662 AVRKSAHAAALIQQAFRVRSFRHRQSIQS-----SDDVSEVSVDLVALGSLNKVSKMIHF--------------------  716 (885)
Q Consensus       662 AvR~A~~AA~rIQ~aFR~~s~R~r~L~~~-----~~d~~e~~~sila~~~l~k~~~~~~~--------------------  716 (885)
                      .||+|++|=++.+..|.   .||..|-..     ..|+++.|..|+.- ..   -...+|                    
T Consensus       617 RvRRAGfAYRr~F~kF~---qRyailsp~t~~twqGD~~~av~~il~~-~~---m~~~qyQmG~tkVFiKnPEsLF~LEe  689 (1106)
T KOG0162|consen  617 RVRRAGFAYRRAFDKFA---QRYAILSPQTWPTWQGDEKQAVEHILRD-VN---MPSDQYQMGVTKVFIKNPESLFLLEE  689 (1106)
T ss_pred             eehhhhhHHHHHHHHHH---HHheecCcccccccccchHHHHHHHHHh-cC---CChhHhhccceeEEecChHHHHHHHH
Confidence            45899999999999998   888887542     24567888888863 11   111112                    


Q ss_pred             --HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 002751          717 --EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV  766 (885)
Q Consensus       717 --~~~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l  766 (885)
                        ++..+.-|.+||++||.|.+||.|.++|..+.++=   -|...|++|--.
T Consensus       690 mRer~~d~~A~~IQkAWRrfv~rrky~k~ree~t~ll---~gKKeRRr~Si~  738 (1106)
T KOG0162|consen  690 MRERKWDGMARRIQKAWRRFVARRKYEKMREEATKLL---LGKKERRRYSIN  738 (1106)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cchHHHHHHHHH
Confidence              34567789999999999999999999999887763   377888887444

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=96.47  E-value=0.0025  Score=44.40  Aligned_cols=21  Identities=38%  Similarity=0.509  Sum_probs=14.5

Q ss_pred             HHHHHHHHHHHhhHHHHHHHH
Q 002751          744 RNHIVKLQAHVRGHQVRKQYK  764 (885)
Q Consensus       744 R~~aI~IQa~~RG~~aRk~y~  764 (885)
                      .+++++||+.|||+.+|++|+
T Consensus         3 ~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        3 TRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHhhh
Confidence            456777777777777777763

Calmodulin-binding motif.

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=96.39  E-value=0.0034  Score=43.67  Aligned_cols=22  Identities=45%  Similarity=0.634  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHH
Q 002751          720 LHFAAIKIQQKYRGWKGRKDFL  741 (885)
Q Consensus       720 ~~~AAv~IQk~~Rg~~~Rk~f~  741 (885)
                      ...+|+.||+.||||+.|+.|.
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            3578999999999999999994

Calmodulin-binding motif.

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=96.38  E-value=0.17  Score=64.87  Aligned_cols=48  Identities=23%  Similarity=0.292  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 002751          719 YLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV  766 (885)
Q Consensus       719 ~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l  766 (885)
                      ....|++.||+.+|.++.+++|..+.+.+|.+|..+|-..+|+++..+
T Consensus       840 ~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~~r~~~a~r~~~e~  887 (1463)
T COG5022         840 FSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELAERQLQEL  887 (1463)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            467789999999999999999999999999999999999999988877

>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa)

Probab=96.01  E-value=0.025  Score=52.74  Aligned_cols=82  Identities=21%  Similarity=0.225  Sum_probs=65.3

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCC-------cccceeee----ecCeEEeecCC-C-----C
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE-------IEVPAEVL----TDNVIRCQAPS-H-----A  370 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd-------~~Vpae~v----~~gvLrC~~Pp-h-----~  370 (885)
                      .|..+|-.-++..||-+|.++|..+.      +...-|.|++       .+.-+++-    ....|+|.+|| |     .
T Consensus         2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~------k~dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~   75 (101)
T cd00602           2 PICRVSSLSGSVNGGDEVFLLCDKVN------KPDIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR   75 (101)
T ss_pred             ceEEEeCCeeEcCCCcEEEEEecCCC------CCCCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence            58889999999999999999995553      2367899999       55555553    66789999999 3     5


Q ss_pred             CcceeEEEEeCCCcccccceeeecc
Q 002751          371 AGRVPFYITGSNRLACSEVREFEYR  395 (885)
Q Consensus       371 ~G~V~l~Vt~~n~~~~Sev~~FeYr  395 (885)
                      |=.|+|++.-.++..+|+...|+|.
T Consensus        76 pV~V~i~L~r~~~~~~S~~~~FtY~  100 (101)
T cd00602          76 PVQVPIQLVRPDDRKRSEPLTFTYT  100 (101)
T ss_pred             cEEEEEEEEeCCCCeecCCcCeEEc
Confidence            5677888877767778999999996

The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.

>smart00248 ANK ankyrin repeats

Probab=95.91  E-value=0.013  Score=38.98  Aligned_cols=27  Identities=44%  Similarity=0.534  Sum_probs=16.7

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 002751          546 GRTALHWASYFGREETVIMLVKLGAAP  572 (885)
Q Consensus       546 G~TPLH~Aa~~G~~eiV~~LL~~GAd~  572 (885)
                      |.||||+|+..|+.++++.|+..|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            556666666666666666666665544

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.89  E-value=0.011  Score=67.54  Aligned_cols=62  Identities=24%  Similarity=0.335  Sum_probs=53.9

Q ss_pred             hhhHHHHHhCCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 002751          526 EWAMRPIIATGVSPNF------RDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS  593 (885)
Q Consensus       526 ~~iV~~LL~~Gadin~------~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa  593 (885)
                      ...|++|.+++++.|+      .|..-.|+||+|+..|..++|.+||+.|+|+...|      ..|+||..++.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd------~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKD------GAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcc------cCCCCcccccc
Confidence            5677889998888875      35557799999999999999999999999987777      79999999999

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.87  E-value=0.011  Score=67.49  Aligned_cols=73  Identities=14%  Similarity=0.064  Sum_probs=47.1

Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCcCCccccCcchhHHHHHhhHHHHH
Q 002751          559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANE  637 (885)
Q Consensus       559 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~lLLe~Ga~~~~~~ln~~d~~~g~tAa~~~~~~~ve  637 (885)
                      ...+++|.+++++.|..--|...+..-.|+||+|+..|...||.+||+.|+|+...|-.      |.+|.++...+.|.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~------Grtpy~ls~nkdVk  476 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGA------GRTPYSLSANKDVK  476 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccC------CCCcccccccHHHH
Confidence            44567777777776665545555566677777777777777777777777777777732      44455554444443

>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]

Probab=95.57  E-value=0.038  Score=69.36  Aligned_cols=98  Identities=21%  Similarity=0.212  Sum_probs=78.7

Q ss_pred             cCCCcccCCceEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc-ccceeeeecCe-EEeecCCC-CCcc
Q 002751          297 LGPSLSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNV-IRCQAPSH-AAGR  373 (885)
Q Consensus       297 ~~~s~~~~q~f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~-~Vpae~v~~gv-LrC~~Pph-~~G~  373 (885)
                      ++.-...-|.+.|.++.|.||+..|||.|+++|+.+..     .+.-.|++|+. +-+....+++. |+|..|+. .++.
T Consensus       133 ~ss~~~s~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~  207 (1025)
T KOG3610|consen  133 LSSCGSSLQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSE  207 (1025)
T ss_pred             ccccceeecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCc
Confidence            33334445678999999999999999999999988863     46789999999 88888889988 99999997 5588


Q ss_pred             eeEEEEeCCCcccccceeeecccCCC
Q 002751          374 VPFYITGSNRLACSEVREFEYREKPS  399 (885)
Q Consensus       374 V~l~Vt~~n~~~~Sev~~FeYr~~~~  399 (885)
                      -++.|..+....-.....|+|...+.
T Consensus       208 ~~~~v~f~~~~~~~~~~~f~y~~dps  233 (1025)
T KOG3610|consen  208 APVLVSFDRTPQKLTPLAFNYTADPS  233 (1025)
T ss_pred             cceEEEecccccccCCCCcccccCCc
Confidence            88889887655433357788886553

>smart00248 ANK ankyrin repeats

Probab=95.28  E-value=0.025  Score=37.51  Aligned_cols=29  Identities=28%  Similarity=0.380  Sum_probs=26.6

Q ss_pred             CCCcHHHHHHHcCChhhHHHHHhCCCCCC
Q 002751          512 GGQGVVHLAAALGYEWAMRPIIATGVSPN  540 (885)
Q Consensus       512 ~G~TpLH~AA~~G~~~iV~~LL~~Gadin  540 (885)
                      .|.||||+|+..|+.++++.|+..|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            47899999999999999999999998775

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=95.26  E-value=0.037  Score=67.34  Aligned_cols=117  Identities=20%  Similarity=0.038  Sum_probs=90.5

Q ss_pred             cHHHHHHHcCChhhHHHHHhC----CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHH
Q 002751          515 GVVHLAAALGYEWAMRPIIAT----GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAAD  590 (885)
Q Consensus       515 TpLH~AA~~G~~~iV~~LL~~----Gadin~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLh  590 (885)
                      --.-.||..|+...|+..++.    ..++|++|.-|+++|++|..+.+.+++++|++.+...             ..+|-
T Consensus        27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------------gdALL   93 (822)
T KOG3609|consen   27 KGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------------GDALL   93 (822)
T ss_pred             HHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------------chHHH
Confidence            345678999999999887754    2678999999999999999999999999999986553             34899


Q ss_pred             HHHhcCcHHHHHHHHHcCCCCCCcCC----cc----ccCcchhHHHHHhhHHHHHHHHHcCC
Q 002751          591 LASSRGHKGIAGYLAEADLSSHLSSL----TV----NENGMDNVAAALAAEKANETAAQIGV  644 (885)
Q Consensus       591 lAa~~G~~eiv~lLLe~Ga~~~~~~l----n~----~d~~~g~tAa~~~~~~~ve~Ll~~~a  644 (885)
                      +|+..|..++|++|+.+-........    +.    .|-.+.-.|++..+.++++.|+.+++
T Consensus        94 ~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~  155 (822)
T KOG3609|consen   94 LAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH  155 (822)
T ss_pred             HHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence            99999999999999986533321111    11    11112337788888999999999998

>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors

Probab=94.99  E-value=0.066  Score=49.68  Aligned_cols=82  Identities=22%  Similarity=0.282  Sum_probs=58.2

Q ss_pred             ceEEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc--------ccc----eeeeecCeEEeecCC-C---
Q 002751          306 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--------EVP----AEVLTDNVIRCQAPS-H---  369 (885)
Q Consensus       306 ~f~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~--------~Vp----ae~v~~gvLrC~~Pp-h---  369 (885)
                      ++.|.+.|-.-++..||-+|.++|..+..       .--|.|-+.        +.-    .+.++...|+|.+|| |   
T Consensus         1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~k-------DikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~   73 (101)
T cd01178           1 LPEIEKKSLNSCSVNGGEELFLTGKNFLK-------DSKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH   73 (101)
T ss_pred             CCeeEEeccCceeecCCCEEEEEehhcCC-------CCEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence            35799999999999999999999944421       123444321        222    233567999999999 3   


Q ss_pred             --CCcceeEEEEeCCCcccccceeeecc
Q 002751          370 --AAGRVPFYITGSNRLACSEVREFEYR  395 (885)
Q Consensus       370 --~~G~V~l~Vt~~n~~~~Sev~~FeYr  395 (885)
                        .|=.|.|++..+. ..+|++..|+|.
T Consensus        74 I~~pV~V~~~l~~~~-~~~S~~~~FtY~  100 (101)
T cd01178          74 VAAPVQVQFYVVNGK-RKRSQPQTFTYT  100 (101)
T ss_pred             cCCceEEEEEEEcCC-CCcCCCCCcEec
Confidence              5667777776543 456999999996

NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.

>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors

Probab=94.60  E-value=0.13  Score=47.81  Aligned_cols=82  Identities=17%  Similarity=0.145  Sum_probs=57.6

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCc-------c-----cceeeeecCeEEeecCC-C-----
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-------E-----VPAEVLTDNVIRCQAPS-H-----  369 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~-------~-----Vpae~v~~gvLrC~~Pp-h-----  369 (885)
                      .|.+++=.-|+..||.+|.+++-...      +-...|.|-+.       +     -|+.+.....++|.+|| |     
T Consensus         2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~------K~dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~   75 (102)
T cd01177           2 KICRLDKTSGSVKGGDEVYLLCDKVQ------KEDIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT   75 (102)
T ss_pred             EEEEecCcccccCCCcEEEEEecccC------CCCCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence            69999999999999999999995543      12334444332       1     12445556778999999 3     


Q ss_pred             CCcceeEEEEeCCCcccccceeeecc
Q 002751          370 AAGRVPFYITGSNRLACSEVREFEYR  395 (885)
Q Consensus       370 ~~G~V~l~Vt~~n~~~~Sev~~FeYr  395 (885)
                      .|=.|.+++.-.....+|+...|+|.
T Consensus        76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~  101 (102)
T cd01177          76 EPVKVKIQLKRPSDGERSESVPFTYV  101 (102)
T ss_pred             CceEEEEEEEeCCCCCccCCcceEEc
Confidence            44566666665545557999999996

NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.

>PTZ00014 myosin-A; Provisional

Probab=93.59  E-value=0.15  Score=63.81  Aligned_cols=41  Identities=12%  Similarity=0.110  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002751          744 RNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRG  784 (885)
Q Consensus       744 R~~aI~IQa~~RG~~aRk~y~~l~~sv~~lqk~i~rwrrkr  784 (885)
                      ...+++||++|||+++|++|+++..++.++|+.+++|..++
T Consensus       777 ~~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~  817 (821)
T PTZ00014        777 EPLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIA  817 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999999987653

>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa)

Probab=93.24  E-value=0.3  Score=44.09  Aligned_cols=66  Identities=15%  Similarity=0.305  Sum_probs=53.2

Q ss_pred             eEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCC-----------CCcceeEEEEeCCCccccccee
Q 002751          323 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-----------AAGRVPFYITGSNRLACSEVRE  391 (885)
Q Consensus       323 tkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph-----------~~G~V~l~Vt~~n~~~~Sev~~  391 (885)
                      .-+-++|..|       ..++.+-||++++-+-+=..-.|.|.+|+-           .|..||+.+.-.+++.=+.-..
T Consensus        20 amlEl~GenF-------~pnLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt   92 (97)
T cd01176          20 AMLELHGENF-------TPNLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT   92 (97)
T ss_pred             EEEEEecCcC-------CCCceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence            5667899555       247999999999999888999999999983           5678888888777777677778


Q ss_pred             eecc
Q 002751          392 FEYR  395 (885)
Q Consensus       392 FeYr  395 (885)
                      |+|.
T Consensus        93 FtYt   96 (97)
T cd01176          93 FTYT   96 (97)
T ss_pred             EEec
Confidence            8885

RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=92.48  E-value=0.44  Score=57.13  Aligned_cols=18  Identities=33%  Similarity=0.386  Sum_probs=11.3

Q ss_pred             HHHHHHHHHHhhhhhhhh
Q 002751          669 AAALIQQAFRVRSFRHRQ  686 (885)
Q Consensus       669 AA~rIQ~aFR~~s~R~r~  686 (885)
                      -+..||..+|++..|.++
T Consensus       698 lvtllQK~~RG~~~R~ry  715 (1001)
T KOG0164|consen  698 LVTLLQKAWRGWLARQRY  715 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            345567777776666555

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]

Probab=91.59  E-value=2.6  Score=57.05  Aligned_cols=39  Identities=26%  Similarity=0.457  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHH
Q 002751          743 IRNHIVKLQAHVRGHQVRKQYKKV---VWSVSIVEKAILRWR  781 (885)
Q Consensus       743 ~R~~aI~IQa~~RG~~aRk~y~~l---~~sv~~lqk~i~rwr  781 (885)
                      +..-++.+||.+|||.+|+.|+++   ..++.+||+.++.|.
T Consensus       772 ls~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~~  813 (1930)
T KOG0161|consen  772 LSQIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAYL  813 (1930)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345678999999999999999888   567788888888763

>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]

Probab=89.78  E-value=6  Score=48.11  Aligned_cols=33  Identities=27%  Similarity=0.277  Sum_probs=20.7

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 002751          719 YLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQ  751 (885)
Q Consensus       719 ~~~~AAv~IQk~~Rg~~~Rk~f~~~R~~aI~IQ  751 (885)
                      .+..+.+++|+..|||++||+|...-..+.+|-
T Consensus       811 yRae~v~k~Q~~~Rg~L~rkr~~~ri~~~~K~~  843 (1259)
T KOG0163|consen  811 YRAECVLKAQRIARGYLARKRHRPRIAGIRKIN  843 (1259)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHH
Confidence            345566777777777777777766554444443

>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]

Probab=88.07  E-value=12  Score=45.76  Aligned_cols=38  Identities=29%  Similarity=0.382  Sum_probs=28.7

Q ss_pred             HHhhhhHHHHHHHHH----------------H-HHHHHHHHHHhhHHHHHHHHHH
Q 002751          729 QKYRGWKGRKDFLKI----------------R-NHIVKLQAHVRGHQVRKQYKKV  766 (885)
Q Consensus       729 k~~Rg~~~Rk~f~~~----------------R-~~aI~IQa~~RG~~aRk~y~~l  766 (885)
                      +++.-|+.|.++++.                | ..++++|+..|||++||+++..
T Consensus       781 ~kVn~WLv~sRWkk~q~~a~sVIKLkNkI~yRae~v~k~Q~~~Rg~L~rkr~~~r  835 (1259)
T KOG0163|consen  781 AKVNKWLVRSRWKKSQYGALSVIKLKNKIIYRAECVLKAQRIARGYLARKRHRPR  835 (1259)
T ss_pred             HHHHHHHHHhHHHHhhhhhhheeehhhHHHHHHHHHHHHHHHHHHHHHHhhhchH
Confidence            345567777666553                2 3578999999999999999877

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=87.87  E-value=6.1  Score=51.27  Aligned_cols=46  Identities=30%  Similarity=0.448  Sum_probs=26.2

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHH-------HHHHHHHHHHhhHHHHHHHHHH
Q 002751          721 HFAAIKIQQKYRGWKGRKDFLKIR-------NHIVKLQAHVRGHQVRKQYKKV  766 (885)
Q Consensus       721 ~~AAv~IQk~~Rg~~~Rk~f~~~R-------~~aI~IQa~~RG~~aRk~y~~l  766 (885)
                      ..-++.+|+..||+..|+.|.+..       .++|+||+.+|+..+|+.|+.+
T Consensus       592 ~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L  644 (1401)
T KOG2128|consen  592 KKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKDYKLL  644 (1401)
T ss_pred             hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchHHHHH
Confidence            334556666666666666554443       2456666666666666666555

>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]

Probab=87.72  E-value=0.14  Score=60.42  Aligned_cols=80  Identities=16%  Similarity=0.203  Sum_probs=60.9

Q ss_pred             EEEEeecCCCCCCCCeEEEEEccCCCCCCCCCCCceEEeeCCcccceeeeecCeEEeecCCC-CCcceeEEEEeCCCc--
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRL--  384 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph-~~G~V~l~Vt~~n~~--  384 (885)
                      .|.|+.|-.+...||++|+..|..+..               ......+|..+...-|+||. .+|.|.|.++...-.  
T Consensus       244 vprd~~~~Q~~i~~~~~v~~~g~n~~~---------------~als~~~~~~s~~~~~l~~~d~~~~v~~~i~~~~~~~~  308 (605)
T KOG3836|consen  244 VPRDMRRFQVLINGGVEVTLLGANFKD---------------IALSTQCSEESTMVNYLPPSDNPGSVSVSITDPSETSD  308 (605)
T ss_pred             Cccccccccccccccceecccccchhh---------------hhhcccccccccceeeccccccCCCceeeecccccccc
Confidence            699999999999999999999966531               56677899999999999886 999999998843211  


Q ss_pred             ----------ccccceeeecccCCCCCC
Q 002751          385 ----------ACSEVREFEYREKPSKAG  402 (885)
Q Consensus       385 ----------~~Sev~~FeYr~~~~~~~  402 (885)
                                ..+....|.|.+..+..+
T Consensus       309 ~~~~~~~~~~~~~~~~i~~yvp~t~~q~  336 (605)
T KOG3836|consen  309 SNNSNSSPPTSSSTKAIFTYVPSTDRQL  336 (605)
T ss_pred             ccccccCCccCCCcccceeeecCCCcee
Confidence                      113345677776655443

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=85.75  E-value=6.4  Score=51.07  Aligned_cols=45  Identities=27%  Similarity=0.324  Sum_probs=21.9

Q ss_pred             HHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 002751          722 FAAIKIQQKYRGWK----GRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV  766 (885)
Q Consensus       722 ~AAv~IQk~~Rg~~----~Rk~f~~~R~~aI~IQa~~RG~~aRk~y~~l  766 (885)
                      -.-.-||..|||++    ....+......++++|+..||+++||.|.+.
T Consensus       566 P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~  614 (1401)
T KOG2128|consen  566 PFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRK  614 (1401)
T ss_pred             chHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHH
Confidence            34445555555555    1222333344555555555555555555444

>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=82.55  E-value=2.2  Score=51.70  Aligned_cols=29  Identities=24%  Similarity=0.174  Sum_probs=24.8

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 002751          714 IHFEDYLHFAAIKIQQKYRGWKGRKDFLK  742 (885)
Q Consensus       714 ~~~~~~~~~AAv~IQk~~Rg~~~Rk~f~~  742 (885)
                      +.|.+++++||+.||+.+|||.+||.|..
T Consensus        23 r~~qrrr~~aa~~iq~~lrsyl~Rkk~~~   51 (1096)
T KOG4427|consen   23 RSYQRRREAAALFIQRVLRSYLVRKKAQI   51 (1096)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33778899999999999999999998653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	885
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-09
2cxk_A	95	Crystal Structure Of The Tig Domain Of Human Calmod		2e-09
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-09
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-06
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		3e-06
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-06
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		1e-05
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		3e-05
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		4e-05
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		1e-04
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		1e-04
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		1e-04
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-04
2dfs_A	1080	3-D Structure Of Myosin-V Inhibited State Length =		1e-04
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-04
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		2e-04
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		2e-04
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		6e-04
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		6e-04
1uoh_A	226	Human Gankyrin Length = 226		6e-04
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		7e-04
2xee_A	157	Structural Determinants For Improved Thermal Stabil		7e-04
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		8e-04
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		9e-04

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G  PN  D  G+  +HLAA  G++  ++ +++ G  PN +D+ G+T LH A+  G +E V
Sbjct: 60  GADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVV 119
Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +L+  GA      DP  +   G+T  DLA   G++ +   L
Sbjct: 120 KLLLSQGA------DPNTSDSDGRTPLDLAREHGNEEVVKLL 155

>pdb|2CXK|A Chain A, Crystal Structure Of The Tig Domain Of Human Calmodulin- Binding Transcription Activator 1 (Camta1) Length = 95

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 309 IRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS 368
           + D+SP+W+Y     KVLI G +       +   + C+F +I VPA ++   V+RC  P+
Sbjct: 9   VTDYSPEWSYPEGGVKVLITGPWQ-----EASNNYSCLFDQISVPASLIQPGVLRCYCPA 63
Query: 369 HAAGRVPFYITGSNRLACSEVREFEYREKPS 399
           H  G V   +  +N++  + V  FEY+  PS
Sbjct: 64  HDTGLVTLQVAFNNQIISNSV-VFEYKSGPS 93

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           E G  PN  D  G+  +H AA  G++  ++ +++ G  PN +D+ GRT LH+A+  G +E
Sbjct: 25  ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKE 84
Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            V +L+  GA P A +        G+T    A+  GHK I   L
Sbjct: 85  IVKLLLSKGADPNAKDS------DGRTPLHYAAENGHKEIVKLL 122

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           E G   N  D  G+  +H AA  G++  ++ +I+ G   N +D+ GRT LH+A+  G +E
Sbjct: 25  ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKE 84
Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            V +L+  GA   A +        G+T    A+  GHK I   L
Sbjct: 85  IVKLLISKGADVNAKDS------DGRTPLHYAAKEGHKEIVKLL 122

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           E G   N  D  G+  +HLAA  G+   ++ ++  G   N +D  GRT LH A+  G  E
Sbjct: 23  EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82
Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
            V +L++ GA   A +        G+T   LA+  GH  +   L EA
Sbjct: 83  VVKLLLEAGADVNAKDK------NGRTPLHLAARNGHLEVVKLLLEA 123

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           E G   N  D  G+  +H AA  G++  ++ +I+ G   N +D+ GRT LH A+  G +E
Sbjct: 25  ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84
Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            V +L+  GA      D       G+T    A+  GHK +   L
Sbjct: 85  VVKLLISKGA------DVNAKDSDGRTPLHHAAENGHKEVVKLL 122

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 19/124 (15%)
Query: 481 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN 540
           ++++ LLRN             G   N +D  G   +HLAA+LG+   +  ++  G   N
Sbjct: 49  EIVEVLLRN-------------GADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVN 95
Query: 541 FRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGI 600
            +DA G T L+ A+Y+G  E V +L+K GA   A +        G+TA D++   G++ +
Sbjct: 96  AKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDK------FGKTAFDISIDIGNEDL 149
Query: 601 AGYL 604
           A  L
Sbjct: 150 AEIL 153

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G   N +DD G   +HLAA  G+   +  ++  G   N RD  GRT LH A+  G  E V
Sbjct: 37  GADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHLEIV 96
Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +L++ GA   A +        G+TA D++   G++ +A  L
Sbjct: 97  EVLLEYGADVNAQDK------FGKTAFDISIDNGNEDLAEIL 132

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G   N  D  G   +HLAA  G+   +  ++  G   N  D  G T LH A++FG  E V
Sbjct: 37  GADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTPLHLAAHFGHLEIV 96
Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGH 597
            +L+K GA   A +D       G T   LA++RGH
Sbjct: 97  EVLLKNGADVNAKDD------NGITPLHLAANRGH 125

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 513 GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP 572
           G   +H+AAA GY   ++ +I      N +D  G T LH A+++G+EE   +LV+     
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE----- 253
Query: 573 GAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE 606
             + D       GQTA D+A     + I GYL E
Sbjct: 254 -NLCDMEAVNKVGQTAFDVAD----EDILGYLEE 282

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           + G   N  D  G   +HLAA  G+   +  ++  G   N +D  G T LH A+  G  E
Sbjct: 56  KAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLE 115
Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
            V +L+K GA   A +        G+T  DLA   GH+ IA  L +A
Sbjct: 116 IVEVLLKAGADVNAQDK------FGKTPFDLAIREGHEDIAEVLQKA 156

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G   N +DD G   +HLAA  G+   +  ++  G   N  D+ GRT LH A+  G  E V
Sbjct: 37  GADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIV 96
Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +L++ GA   A +        G+TA D++   G++ +A  L
Sbjct: 97  EVLLEYGADVNAQDK------FGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G   N  DD G   +HLAA +G+   +  ++  G   N RD  G T LH A+  G  E V
Sbjct: 37  GADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNGHLEIV 96
Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGH 597
            +L+K GA   A +    A+  G T   LA+ RGH
Sbjct: 97  EVLLKYGADVNAQD----AY--GLTPLHLAADRGH 125

>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 718 DYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVR 760
           D L  A I+IQ+  RGW  RK ++++R   + +Q +VRGHQ R
Sbjct: 765 DKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQAR 807

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 513 GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP 572
           G+  +HLAA  G+   ++ ++  G   N +D  GRT LH A+  G  E V +L++ GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 573 GAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
            A +        G+T   LA+  GH  +   L EA
Sbjct: 62  NAKDK------NGRTPLHLAARNGHLEVVKLLLEA 90

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G   N +DD G   +HLAA  G+   +  ++  G   N  D  GRT LH A+  G  E V
Sbjct: 37  GADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIV 96
Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +L++ GA   A +        G+TA D++   G++ +A  L
Sbjct: 97  EVLLEYGADVNAQDK------FGKTAFDISIDNGNEDLAEIL 132

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           + G   N +D  G   + LAA  G+   +  ++  G   N  D  G T LH A+ FG  E
Sbjct: 68  KNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLE 127
Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            V +L+K GA   A +        G+TA D++   G++ +A  L
Sbjct: 128 IVEVLLKNGADVNAQDK------FGKTAFDISIDNGNEDLAEIL 165

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
           DD G   +H+AA+ G +  ++ ++  G   N  +  G T LH+A+   R E  +ML++ G
Sbjct: 70  DDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129
Query: 570 AAPGA 574
           A P A
Sbjct: 130 ANPDA 134

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
           DD G   +H+AA+ G +  ++ ++  G   N  +  G T LH+A+   R E  +ML++ G
Sbjct: 71  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 130
Query: 570 AAPGA 574
           A P A
Sbjct: 131 ANPDA 135

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
           DD G   +H+AA+ G +  ++ ++  G   N  +  G T LH+A+   R E  +ML++ G
Sbjct: 70  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129
Query: 570 AAPGA 574
           A P A
Sbjct: 130 ANPDA 134

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
           DD G   +H+AA+ G +  ++ ++  G   N  +  G T LH+A+   R E  +ML++ G
Sbjct: 70  DDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129
Query: 570 AAPGA 574
           A P A
Sbjct: 130 ANPDA 134

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           + G   N  D  G   +HLAA  G+   +  ++  G   N +D  G T LH A+  G  E
Sbjct: 56  KAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLE 115
Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
            V +L+K GA   A +        G+T  DLA   G++ IA  L +A
Sbjct: 116 IVEVLLKAGADVNAQDK------FGKTPFDLAIDNGNEDIAEVLQKA 156

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G   N  D+ G   +HLAA  G+   +  ++  G   N +D  G T LH A+Y G  E V
Sbjct: 70  GADVNAWDNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIV 129
Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +L+K GA   A +        G+TA D++   G++ +A  L
Sbjct: 130 EVLLKYGADVNAQDK------FGKTAFDISIDNGNEDLAEIL 165

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G   N ID  G   +HLAA +G+   +  ++  G   N  D  G T LH A+  G  E V
Sbjct: 70  GADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIV 129
Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +L+K GA   A +        G+TA D++   G++ +A  L
Sbjct: 130 EVLLKHGADVNAQDK------FGKTAFDISIDNGNEDLAEIL 165

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	885
2cxk_A	95	Camta1, calmodulin binding transcription activator	3e-36
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	3e-16
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	8e-04
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-12
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-10
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-10
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-07
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-04
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-12
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-11
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	6e-07
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-12
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-11
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-10
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-06
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-11
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-10
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-09
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-07
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-07
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-11
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-10
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-04
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-11
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-11
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	6e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-09
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-08
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-05
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-11
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-09
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-11
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	6e-10
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	6e-09
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-07
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-11
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	9e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-11
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	7e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-11
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-09
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-09
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	8e-05
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	6e-11
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-09
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-08
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-07
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-06
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-11
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-08
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-10
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-05
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-09
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-07
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-10
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-08
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	8e-08
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-10
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-09
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-08
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-05
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-05
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-10
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-08
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-06
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-06
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-05
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-10
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	6e-09
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-06
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-04
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-10
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-10
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-09
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-05
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	9e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-10
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-10
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-05
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-10
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	6e-08
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-07
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-10
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-08
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-10
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-10
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-07
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-04
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-10
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-10
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-07
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-06
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-10
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-08
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-07
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-10
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-07
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-07
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-07
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-06
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	7e-10
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	8e-10
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-08
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-05
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-04
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-10
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-09
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-06
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-09
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-09
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-08
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-08
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-06
3muj_A	138	Transcription factor COE3; immunoglobulin like fol	1e-09
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-09
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-09
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	8e-09
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-08
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	9e-05
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-09
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	9e-08
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-04
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-04
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-06
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-05
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-09
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-06
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-09
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-07
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-04
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-09
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-09
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-08
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-06
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-08
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-05
2rfa_A	232	Transient receptor potential cation channel subfa	5e-09
2rfa_A	232	Transient receptor potential cation channel subfa	2e-07
2rfa_A	232	Transient receptor potential cation channel subfa	1e-06
2rfa_A	232	Transient receptor potential cation channel subfa	2e-06
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-08
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	5e-07
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	8e-06
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	7e-04
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	2e-08
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-08
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-08
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-05
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-07
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-07
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-07
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-07
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-07
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	5e-05
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	1e-07
2pnn_A	273	Transient receptor potential cation channel subfa	3e-07
2pnn_A	273	Transient receptor potential cation channel subfa	8e-07
2pnn_A	273	Transient receptor potential cation channel subfa	3e-06
2pnn_A	273	Transient receptor potential cation channel subfa	3e-06
2pnn_A	273	Transient receptor potential cation channel subfa	1e-04
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	3e-07
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-07
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	4e-07
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-06
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	9e-07
3jxi_A	260	Vanilloid receptor-related osmotically activated p	9e-07
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-04
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	3e-06
3mlp_A	402	Transcription factor COE1; transcription factor, p	4e-06
2uzx_B	727	Hepatocyte growth factor receptor; signaling prote	2e-05
2etb_A	256	Transient receptor potential cation channel subfam	2e-05
2etb_A	256	Transient receptor potential cation channel subfam	4e-05
2etb_A	256	Transient receptor potential cation channel subfam	6e-05
2etb_A	256	Transient receptor potential cation channel subfam	7e-05

>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1 Length = 95

 Score =  130 bits (329), Expect = 3e-36
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 302 SQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNV 361
           S      + D+SP+W+Y     KVLI G +       +   + C+F +I VPA ++   V
Sbjct: 2   SSGSSGMVTDYSPEWSYPEGGVKVLITGPWQ-----EASNNYSCLFDQISVPASLIQPGV 56

Query: 362 IRCQAPSHAAGRVPFYITGSNRLACSEVREFEYREKPSK 400
           +RC  P+H  G V   +  +N++  + V  FEY+  PS 
Sbjct: 57  LRCYCPAHDTGLVTLQVAFNNQIISNSV-VFEYKSGPSS 94

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 72.6 bits (179), Expect = 3e-16
 Identities = 19/48 (39%), Positives = 28/48 (58%)

Query: 718 DYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKK 765
           D L  A I+IQ+  RGW  RK +L ++   + +Q +VRG+Q R   K 
Sbjct: 2   DKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKF 49

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 37.5 bits (88), Expect = 8e-04
 Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 742 KIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRW--RRRGSGLR 788
           K+R   +++Q  +RG  +RK+Y  +  +   V++ +  +  R     LR
Sbjct: 3   KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLR 51

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 65.9 bits (162), Expect = 1e-12
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           NV++ G    +HLAA+ G+   ++ ++      N  +  G   LH+A ++G+++    LV
Sbjct: 66  NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLV 125

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE--ADL 609
             GA              G+   D A +   + +     +   +L
Sbjct: 126 ANGALVSICNK------YGEMPVDKAKAPLRELLRERAEKMGQNL 164

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 59.4 bits (145), Expect = 2e-10
 Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 6/106 (5%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 558
           +       N  DD G   +H A   G    +  +I  G   N  +    T LH A+  G 
Sbjct: 25  LDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH 84

Query: 559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            + V  L++  A   AV +       G      A   G   +A  L
Sbjct: 85  RDIVQKLLQYKADINAVNE------HGNVPLHYACFWGQDQVAEDL 124

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 59.4 bits (145), Expect = 3e-10
 Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 518 HLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVE 576
                 G   A+R  +       N  D  G + LHWA   GR   V ML+  GA    + 
Sbjct: 10  FTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMN 69

Query: 577 DPTPAFPGGQTAADLASSRGHKGIAGYL 604
                  G  T   LA+S GH+ I   L
Sbjct: 70  R------GDDTPLHLAASHGHRDIVQKL 91

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 49.4 bits (119), Expect = 6e-07
 Identities = 14/92 (15%), Positives = 26/92 (28%), Gaps = 12/92 (13%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N +++ G   +H A   G +     ++A G   +  +  G   +  A    RE      
Sbjct: 98  INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERA 157

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGH 597
            K+G                         +G 
Sbjct: 158 EKMGQNLNR------------IPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 41.6 bits (99), Expect = 3e-04
 Identities = 7/59 (11%), Positives = 12/59 (20%), Gaps = 5/59 (8%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
               +      G    V + +          D       G +    A   G   +   L
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGD-----DHGFSPLHWACREGRSAVVEML 58

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 65.2 bits (160), Expect = 3e-12
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 7/106 (6%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGREET 561
            +  + +D+ G+  +   A LG +  +R +   G   + RD R G TALH A+ + R E 
Sbjct: 66  DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEV 125

Query: 562 VIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
           V  LV+LGA     ++       G TA +LA         G   + 
Sbjct: 126 VEALVELGADIEVEDE------RGLTALELAREILKTTPKGNPMQF 165

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 61.7 bits (151), Expect = 4e-11
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 7/102 (6%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
               +V+ +  +     AA    E A+  ++      +  D  GRTAL + +  G ++ V
Sbjct: 35  YIAADVVSEY-ETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCV 92

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +L + GA     +       GG TA  +A+      +   L
Sbjct: 93  RLLAEAGADLDHRDM-----RGGLTALHMAAGYVRPEVVEAL 129

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 49.4 bits (119), Expect = 6e-07
 Identities = 12/53 (22%), Positives = 19/53 (35%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGA 570
           H+AA       +  ++  G      D RG TAL  A    +       ++ G 
Sbjct: 115 HMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 64.3 bits (158), Expect = 4e-12
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           H  AA G    +   I      N  D  G T L WA+  G+   V  L++ GA P  +  
Sbjct: 8   HQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK 67

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                 G ++A  LA S+G+  I   L
Sbjct: 68  ------GRESALSLACSKGYTDIVKML 88

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 62.8 bits (154), Expect = 1e-11
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 8/106 (7%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           P ++  G +  + LA + GY   ++ ++  GV  N  D  G T L +A +    + V ML
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE--ADL 609
           ++ GA P    D       G  + DLA + G++ +   +      L
Sbjct: 122 LESGADPTIETD------SGYNSMDLAVALGYRSVQQVIESHLLKL 161

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 58.6 bits (143), Expect = 4e-10
 Identities = 22/98 (22%), Positives = 31/98 (31%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D+ G   +  AAA G    +  ++  G  P        +AL  A   G  + V ML+
Sbjct: 30  NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLL 89

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             G      +        G T    A    H      L
Sbjct: 90  DCGVDVNEYDW------NGGTPLLYAVHGNHVKCVKML 121

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 47.8 bits (115), Expect = 2e-06
 Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 6/60 (10%)

Query: 545 RGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
               ++H  +  G    +   ++        ++       G T    A++ G   +  +L
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDE------EGFTPLMWAAAHGQIAVVEFL 55

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 64.8 bits (159), Expect = 1e-11
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N +DD G+  +H AAA+    A   ++  G + + ++ R  T L  A+  G  ET  +L+
Sbjct: 151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLL 210

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
              A     +         +   D+A  R H  I   L
Sbjct: 211 DHFANRDITDH------MDRLPRDIAQERMHHDIVRLL 242

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 61.7 bits (151), Expect = 1e-10
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 6/106 (5%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 558
           I       +     G   + LAA L  E  +  +I +    N  D  G++ALHWA+    
Sbjct: 110 IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 169

Query: 559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +  ++L+K GA      +        +T   LA+  G    A  L
Sbjct: 170 VDAAVVLLKNGANKDMQNN------REETPLFLAAREGSYETAKVL 209

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 55.2 bits (134), Expect = 2e-08
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N  D  G+  +HLAA      A + ++      N +D  GRT LH A     +    +L
Sbjct: 50  HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL 109

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           ++  A              G T   LA+    +G+   L
Sbjct: 110 IRNRATDLDARMHD-----GTTPLILAARLAVEGMLEDL 143

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 43.6 bits (104), Expect = 1e-04
 Identities = 9/67 (13%), Positives = 22/67 (32%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            ++ ++  +  + LAA  G     + ++    + +  D   R     A      + V +L
Sbjct: 183 KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242

Query: 566 VKLGAAP 572
                  
Sbjct: 243 DLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 42.5 bits (101), Expect = 3e-04
 Identities = 19/81 (23%), Positives = 25/81 (30%), Gaps = 18/81 (22%)

Query: 537 VSPNFRDARGRTALHWASYFG-------------REETVIMLVKLGAAPGAVEDPTPAFP 583
           +  N R   G T L  AS  G                 +   +  GA+     D T    
Sbjct: 1   MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRT---- 56

Query: 584 GGQTAADLASSRGHKGIAGYL 604
            G+TA  LA+       A  L
Sbjct: 57  -GETALHLAARYSRSDAAKRL 76

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 62.8 bits (154), Expect = 1e-11
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 8/106 (7%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           P+++    +  + LA+  GY   +  ++   V  N  D  G T L +A      + V  L
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE--ADL 609
           +  GA      D       G T  DLA + G++ +   +      L
Sbjct: 122 LARGADLTTEAD------SGYTPMDLAVALGYRKVQQVIENHILKL 161

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 62.4 bits (153), Expect = 2e-11
 Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 7/94 (7%)

Query: 512 GGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGREETVIMLVKLGA 570
           G    +H  AA G    ++  +  G    N  D RG T L WAS FG  ETV  L++ GA
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA 60

Query: 571 APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            P  +          ++A  LAS+ G+  I G L
Sbjct: 61  DPHILAK------ERESALSLASTGGYTDIVGLL 88

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 59.0 bits (144), Expect = 3e-10
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 6/106 (5%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 558
           + +G    N  D+ G   +  A+A G    +R ++  G  P+       +AL  AS  G 
Sbjct: 22  LRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81

Query: 559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            + V +L++        +        G T    A    H      L
Sbjct: 82  TDIVGLLLERDVDINIYDW------NGGTPLLYAVRGNHVKCVEAL 121

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 65.6 bits (161), Expect = 3e-11
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
                + G   +H+A+ +G+   ++ ++  G SPN  + +  T LH A+  G  E    L
Sbjct: 7   GGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYL 66

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           ++  A   A           QT    A+  GH  +   L
Sbjct: 67  LQNKAKVNAKAK------DDQTPLHCAARIGHTNMVKLL 99

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 64.4 bits (158), Expect = 6e-11
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           PNV +   +  +H+AA  G+    + ++      N +    +T LH A+  G    V +L
Sbjct: 40  PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLL 99

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           ++  A P            G T   +A+  GH      L
Sbjct: 100 LENNANPNLATT------AGHTPLHIAAREGHVETVLAL 132

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 63.7 bits (156), Expect = 1e-10
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           PN+    G   +H+AA  G+   +  ++    S      +G T LH A+ +G+     +L
Sbjct: 106 PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELL 165

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           ++  A P A          G T   +A    +  I   L
Sbjct: 166 LERDAHPNAAGK------NGLTPLHVAVHHNNLDIVKLL 198

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 63.3 bits (155), Expect = 1e-10
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
              +   G   +H+AA  G       ++     PN     G T LH A +    + V +L
Sbjct: 139 QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 198

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +  G +P +          G T   +A+ +    +A  L
Sbjct: 199 LPRGGSPHSPAW------NGYTPLHIAAKQNQVEVARSL 231

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 63.3 bits (155), Expect = 1e-10
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            +     G   +H+A+  G    ++ ++      N +   G + LH A+  G  + V +L
Sbjct: 304 VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLL 363

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +K GA       P      G T   +A   G+  +   L
Sbjct: 364 LKNGA------SPNEVSSDGTTPLAIAKRLGYISVTDVL 396

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 62.9 bits (154), Expect = 2e-10
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N+ +  G   +HL A  G+      +I  GV  +     G T LH AS++G  + V  L
Sbjct: 271 GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL 330

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           ++  A   A          G +    A+ +GH  I   L
Sbjct: 331 LQHQADVNAKTK------LGYSPLHQAAQQGHTDIVTLL 363

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 62.5 bits (153), Expect = 3e-10
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N     G   +HLAA  G+   +  +++   + N  +  G T LH  +  G      +L
Sbjct: 238 ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 297

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +K G    A          G T   +AS  G+  +  +L
Sbjct: 298 IKHGVMVDATTR------MGYTPLHVASHYGNIKLVKFL 330

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 61.7 bits (151), Expect = 4e-10
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           PN     G   +H+A        ++ ++  G SP+     G T LH A+   + E    L
Sbjct: 172 PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 231

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           ++ G +  A          G T   LA+  GH  +   L
Sbjct: 232 LQYGGSANAESV------QGVTPLHLAAQEGHAEMVALL 264

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 61.7 bits (151), Expect = 5e-10
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N      Q  +H AA +G+   ++ ++    +PN     G T LH A+  G  ETV+ L
Sbjct: 73  VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL 132

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           ++  A+   +         G T   +A+  G   +A  L
Sbjct: 133 LEKEASQACMTK------KGFTPLHVAAKYGKVRVAELL 165

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 60.2 bits (147), Expect = 1e-09
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           P+     G   +H+AA        R ++  G S N    +G T LH A+  G  E V +L
Sbjct: 205 PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALL 264

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +   A              G T   L +  GH  +A  L
Sbjct: 265 LSKQANGNLGNK------SGLTPLHLVAQEGHVPVADVL 297

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 56.3 bits (137), Expect = 2e-08
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595
           G+S       G T LH AS+ G    V  L++ GA+P             +T   +A+  
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNV------KVETPLHMAARA 57

Query: 596 GHKGIAGYL 604
           GH  +A YL
Sbjct: 58  GHTEVAKYL 66

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 46.7 bits (112), Expect = 2e-05
 Identities = 16/65 (24%), Positives = 24/65 (36%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N     G   +H AA  G+   +  ++  G SPN   + G T L  A   G      +L
Sbjct: 337 VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396

Query: 566 VKLGA 570
             +  
Sbjct: 397 KVVTD 401

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
               +V+ +  +     AA    E A+  ++      +  D  GRTAL + +  G ++ V
Sbjct: 36  YIAADVVSEY-ETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCV 93

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
            +L + GA     +       GG TA  +A+      +   L E 
Sbjct: 94  RLLAEAGADLDHRDM-----RGGLTALHMAAGYVRPEVVEALVEL 133

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 56.5 bits (137), Expect = 7e-09
 Identities = 21/126 (16%), Positives = 34/126 (26%), Gaps = 12/126 (9%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           H+AA       +  ++  G      D RG TAL  A    +       ++ G   G  E 
Sbjct: 116 HMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGL-EK 174

Query: 578 PTP----AFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAE 633
                           ++   RG      YL           +    +  ++V       
Sbjct: 175 VINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKG-VHVAEDV------A 227

Query: 634 KANETA 639
           K  E  
Sbjct: 228 KDYEDG 233

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 64.1 bits (157), Expect = 3e-11
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 7/98 (7%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N+I       +H A   G+   ++ ++  G   N   A   T L  A   G  + V +L+
Sbjct: 86  NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL 145

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           + GA+     D         +    A+ RGH      L
Sbjct: 146 QHGASVQPESD-------LASPIHEAARRGHVECVNSL 176

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 60.2 bits (147), Expect = 6e-10
 Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 8/102 (7%)

Query: 504 KGPNV-IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
            G +V  +      +H AA  G+   +  +IA G + + + +   T L+ A    +   V
Sbjct: 147 HGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACV 206

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             L++ GA     +          +          + +A  L
Sbjct: 207 KKLLESGADVNQGKG-------QDSPLHAVVRTASEELACLL 241

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 57.1 bits (139), Expect = 6e-09
 Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 7/129 (5%)

Query: 477 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIAT 535
            S D     +  ++      +        P + D       +H AA  G++ ++R +I+ 
Sbjct: 22  ASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQ 81

Query: 536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595
           G + N   A   + LH A   G    V +L+K GA    V           T    A   
Sbjct: 82  GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA------DWHTPLFNACVS 135

Query: 596 GHKGIAGYL 604
           G       L
Sbjct: 136 GSWDCVNLL 144

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 52.5 bits (127), Expect = 2e-07
 Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 13/107 (12%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            +         ++LA        ++ ++ +G   N +     + LH       EE   +L
Sbjct: 183 IDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLL 241

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSH 612
           +  GA   A          G+   +L            LA+  L   
Sbjct: 242 MDFGADTQAKNA------EGKRPVELVPPESP------LAQLFLERE 276

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 61.3 bits (150), Expect = 4e-11
 Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 8/105 (7%)

Query: 504 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVI 563
                  +     +  AAA G    +R ++  G +PN  ++ GR  +      G      
Sbjct: 3   PAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAE 61

Query: 564 MLVKLGAAPGAVEDPTPAFPGGQTAA-DLASSRGHKGIAGYLAEA 607
           +L+  GA      +P  A P   T     A+  G       L  A
Sbjct: 62  LLLLHGA------EPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 57.1 bits (139), Expect = 9e-10
 Identities = 21/97 (21%), Positives = 30/97 (30%), Gaps = 12/97 (12%)

Query: 506 PNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIM 564
           PN  D       VH AA  G+   +  +   G   + RDA GR  +  A   G  +    
Sbjct: 70  PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 129

Query: 565 LVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIA 601
           L                   G   A + ++ G   I 
Sbjct: 130 LRAAAGG-----------TRGSNHARIDAAEGPSDIP 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 60.9 bits (149), Expect = 5e-11
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           PNV D  G   VH AA  G+   ++ ++  G   N  D  G   +H A   G    V  L
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
               +     +        G T  +LA  RG + +   L
Sbjct: 121 AA-ESDLHRRDA------RGLTPLELALQRGAQDLVDIL 152

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 57.4 bits (140), Expect = 7e-10
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 8/111 (7%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 558
           +H     P+ ++  G+  +      G       ++  G SPN +D  G + +H A+  G 
Sbjct: 22  LHRELVHPDALNRFGKTALQ-VMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80

Query: 559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE-AD 608
            +T+ +LV+ GA     +        G     LA   GH  +  +LA  +D
Sbjct: 81  LDTLKVLVEHGADVNVPDG------TGALPIHLAVQEGHTAVVSFLAAESD 125

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 40.5 bits (96), Expect = 5e-04
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            NV D  G   +HLA   G+   +  + A     + RDARG T L  A   G ++ V +L
Sbjct: 94  VNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDIL 152

Query: 566 VK 567
             
Sbjct: 153 QG 154

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 62.4 bits (153), Expect = 5e-11
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N +DD G+  +H AAA+    A   ++  G + + ++ R  T L  A+  G  ET  +L
Sbjct: 118 VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL 177

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +   A     +         +   D+A  R H  I   L
Sbjct: 178 LDHFANRDITDH------MDRLPRDIAQERMHHDIVRLL 210

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 58.6 bits (143), Expect = 1e-09
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 6/106 (5%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 558
           I       +     G   + LAA L  E  +  +I +    N  D  G++ALHWA+    
Sbjct: 78  IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 137

Query: 559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +  ++L+K GA      +        +T   LA+  G    A  L
Sbjct: 138 VDAAVVLLKNGANKDMQNN------REETPLFLAAREGSYETAKVL 177

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 56.3 bits (137), Expect = 7e-09
 Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 491 LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTAL 550
           +       I++G    N  D  G+  +HLAA      A + ++      N +D  GRT L
Sbjct: 6   VISDF---IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPL 62

Query: 551 HWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           H A     +    +L++  A              G T   LA+    +G+   L
Sbjct: 63  HAAVSADAQGVFQILIRNRATDLDARMHD-----GTTPLILAARLAVEGMLEDL 111

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 43.9 bits (105), Expect = 8e-05
 Identities = 9/64 (14%), Positives = 23/64 (35%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           ++ ++  +  + LAA  G     + ++    + +  D   R     A      + V +L 
Sbjct: 152 DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 211

Query: 567 KLGA 570
           +   
Sbjct: 212 EYNL 215

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 62.5 bits (153), Expect = 6e-11
 Identities = 22/98 (22%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
             IDD     +  A   G     R ++  G      D    T LHWA+   R + V   +
Sbjct: 3   THIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYI 62

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             GA    +           T    A+ +GH  +   L
Sbjct: 63  SKGAIVDQLGG-----DLNSTPLHWATRQGHLSMVVQL 95

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 57.1 bits (139), Expect = 4e-09
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 8/104 (7%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAM-RPIIATGVSPNFRD-ARGRTALHWASYFGREETVI 563
            +++D  G   +  AA   +     R ++   VS N  D     TALHWA   G    + 
Sbjct: 135 VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVIS 194

Query: 564 MLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
           +L++ GA   A          G++A DLA  R +  +  +L EA
Sbjct: 195 LLLEAGANVDAQNI------KGESALDLAKQRKNVWMINHLQEA 232

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 55.1 bits (134), Expect = 2e-08
 Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA-RGRTALHWASYFGREETVIM 564
               D     ++H AA       ++  I+ G   +        T LHWA+  G    V+ 
Sbjct: 35  VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQ 94

Query: 565 LVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           L+K GA      DP+     G +   LA+  GH  I  YL
Sbjct: 95  LMKYGA------DPSLIDGEGCSCIHLAAQFGHTSIVAYL 128

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 52.4 bits (127), Expect = 1e-07
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           H A   G+   +  ++  G  P+  D  G + +H A+ FG    V  L+  G     ++ 
Sbjct: 81  HWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ 140

Query: 578 PTPAFPGGQTAADLASSRGH-KGIAGYL 604
                  G T    A+ R H       L
Sbjct: 141 ------NGMTPLMWAAYRTHSVDPTRLL 162

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 48.2 bits (116), Expect = 4e-06
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGA 574
           H A   G    +  ++  G + + ++ +G +AL  A        +  L +   A G 
Sbjct: 182 HWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGY 238

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 60.1 bits (147), Expect = 7e-11
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           +      +  +H+AA+ G+   +  ++  G   N +D    TALHWA+    +E V +L+
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           K GA               +TA D++   G++ +A  L
Sbjct: 121 KYGADVHTQSK------FCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 53.9 bits (131), Expect = 1e-08
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 6/87 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           HLAA  G+      ++  GVS + R    RT LH A+  G    V +L+K GA   A + 
Sbjct: 39  HLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM 98

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                    TA   A+   H+ +   L
Sbjct: 99  ------LKMTALHWATEHNHQEVVELL 119

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 43.1 bits (103), Expect = 6e-05
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 7/59 (11%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
               L  A+  G+++ V +L+  GA              G +   LA+  GH      L
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTTDWL-------GTSPLHLAAQYGHFSTTEVL 53

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 22/146 (15%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
               +     +H AA  G    +R  +   V  N  D  G TAL+WA + G ++ V ML 
Sbjct: 67  AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLF 126

Query: 567 -KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE--ADLSS---------HLS 614
            +                 G TA   A+ +G+  I   L    A              ++
Sbjct: 127 TQPNIELNQQNK------LGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMA 180

Query: 615 SLTVNENGMDNVAAALAAEKANETAA 640
           +         ++        A  T +
Sbjct: 181 T----NAACASLLKKKQGTDAVRTLS 202

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 11/62 (17%), Positives = 17/62 (27%), Gaps = 6/62 (9%)

Query: 539 PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHK 598
           P      G+  +  A Y     T   L         + D         T     +S+G  
Sbjct: 5   PPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITD------MSDTNWWKGTSKGRT 58

Query: 599 GI 600
           G+
Sbjct: 59  GL 60

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 10/88 (11%), Positives = 16/88 (18%), Gaps = 11/88 (12%)

Query: 517 VHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVE 576
           V  A           +        +      T     +  GR      L+         E
Sbjct: 16  VFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTG----LIPSNYVAEQAE 71

Query: 577 DPTPAFPGGQTAADLASSRGHKGIAGYL 604
                          A+ RG+       
Sbjct: 72  S-------IDNPLHEAAKRGNLSWLREC 92

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 61.3 bits (150), Expect = 1e-10
 Identities = 20/105 (19%), Positives = 36/105 (34%), Gaps = 8/105 (7%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N+ D+     +H AA  G       ++A     +  +  G + LH A+   R + V++ 
Sbjct: 137 INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLF 196

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL--AEAD 608
           +   +              G+T    AS       A  +  A  D
Sbjct: 197 LSRDSDVTLKNK------EGETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 60.9 bits (149), Expect = 2e-10
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 6/106 (5%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 558
           +  G    N  DDGG   +  A    +   ++ +++ G   N RD      LHWA++ G 
Sbjct: 97  LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGC 156

Query: 559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +   +L+       AV         G +   +A+           
Sbjct: 157 VDIAEILLAAKCDLHAVNI------HGDSPLHIAARENRYDCVVLF 196

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 59.3 bits (145), Expect = 6e-10
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
            +     +  +H AA  G+      ++  G + +      RT L  A+     E V  L+
Sbjct: 5   KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLI 64

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           K GA     +        G T   LA+ +GH  +  YL
Sbjct: 65  KAGALVDPKDA------EGSTCLHLAAKKGHYEVVQYL 96

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 57.4 bits (140), Expect = 3e-09
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           +   +  +  +  AA   +  A++ +I  G   + +DA G T LH A+  G  E V  L+
Sbjct: 38  DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLL 97

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             G       D      GG T    A+   H  +   L
Sbjct: 98  SNGQM-----DVNCQDDGGWTPMIWATEYKHVDLVKLL 130

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 51.6 bits (125), Expect = 3e-07
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 6/68 (8%)

Query: 537 VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG 596
           ++        R+ LH A+  G  +   MLV+ GA      +        +T    A+   
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE------DQRTPLMEAAENN 55

Query: 597 HKGIAGYL 604
           H     YL
Sbjct: 56  HLEAVKYL 63

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 62.2 bits (152), Expect = 2e-10
 Identities = 19/101 (18%), Positives = 27/101 (26%), Gaps = 6/101 (5%)

Query: 505 GPNVIDDGGQGVVHLAAALGYEWAMRPI-IATGVSPNFRDARGRTALHWASYFGREETVI 563
             +   D       + +    E    P      +     +  G T LH A      E V 
Sbjct: 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVR 175

Query: 564 MLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +L   GA     E        G+T   LA       +   L
Sbjct: 176 LLRDAGADLNKPEP-----TCGRTPLHLAVEAQAASVLELL 211

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 57.2 bits (139), Expect = 5e-09
 Identities = 17/91 (18%), Positives = 23/91 (25%), Gaps = 6/91 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           HLA        +  ++  G  P  R   GRT L  A          +L   GA       
Sbjct: 197 HLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGG 256

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYLAEAD 608
                    +    + S           E D
Sbjct: 257 ------DKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 56.4 bits (137), Expect = 1e-08
 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA-RGRTALHWASYFGREETVIML 565
              +  G   +H+A        +R +   G   N  +   GRT LH A        + +L
Sbjct: 152 EAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELL 211

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +K GA P A         GG+T    A  R +  +A  L
Sbjct: 212 LKAGADPTARMY------GGRTPLGSALLRPNPILARLL 244

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 53.7 bits (130), Expect = 8e-08
 Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 540 NFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKG 599
            +    G TALH A     E  +  L+   A    ++        GQTA  LA+  G   
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQN---DLGQTALHLAAILGEAS 59

Query: 600 IAGYL 604
               L
Sbjct: 60  TVEKL 64

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 52.9 bits (128), Expect = 1e-07
 Identities = 21/105 (20%), Positives = 34/105 (32%), Gaps = 7/105 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           ++ +D GQ  +HLAA LG    +  + A G      +  G TALH A          +L+
Sbjct: 39  DLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLL 98

Query: 567 KLGAAPGAVEDPTPAFPG-------GQTAADLASSRGHKGIAGYL 604
           +   +       T                A + S    +      
Sbjct: 99  QPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPR 143

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 61.7 bits (151), Expect = 2e-10
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 4/103 (3%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           P +    G     LAA  G    ++  ++ G   N  D  G TA   A+ +G+ + +  L
Sbjct: 65  PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124

Query: 566 VKLGAAPGA----VEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            K GA         ED      GG TA   A+ +GH  +   L
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 167

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 57.5 bits (140), Expect = 4e-09
 Identities = 26/111 (23%), Positives = 38/111 (34%), Gaps = 11/111 (9%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPI----IATGVSPNFRDARGRTALHWAS 554
           + E G   N  D+ G+  +  A     +  +  I    +  G   N R  RG+T L  A 
Sbjct: 168 LDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV 227

Query: 555 YFGREETVIMLV-KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
                  V  L+ +        +        G+TA  LA     K IA  L
Sbjct: 228 EKKHLGLVQRLLEQEHIEINDTDS------DGKTALLLAVELKLKKIAELL 272

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 56.3 bits (137), Expect = 1e-08
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 504 KGPNV---IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
            G NV    ++GG   +H A  +  E  +  ++  G  P  R   G T    A+  G  +
Sbjct: 27  GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVK 86

Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            + + +  GA     +        G TA   A+  G      +L
Sbjct: 87  LLKLFLSKGADVNECDF------YGFTAFMEAAVYGKVKALKFL 124

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 46.7 bits (112), Expect = 1e-05
 Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 5/59 (8%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
               L  A      + V  L++ GA     E+      GG T    A     + I   L
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEE-----EGGWTPLHNAVQMSREDIVELL 58

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 46.3 bits (111), Expect = 2e-05
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 507 NVIDDGGQGVVHLAAALGY-EWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           NV  + G+  + LA    +     R +    +  N  D+ G+TAL  A     ++   +L
Sbjct: 213 NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 272

Query: 566 VKLGA 570
            K GA
Sbjct: 273 CKRGA 277

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 42.1 bits (100), Expect = 5e-04
 Identities = 24/112 (21%), Positives = 38/112 (33%), Gaps = 17/112 (15%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD----------ARGRTALHWASY 555
            N  D  G      AA  G   A++ +   G + N R             G TAL  A+ 
Sbjct: 98  VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157

Query: 556 FGREETVIMLV-KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE 606
            G  E + +L+ ++GA   A ++       G+ A   A           +  
Sbjct: 158 KGHVEVLKILLDEMGADVNACDN------MGRNALIHALLSSDDSDVEAITH 203

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 61.7 bits (151), Expect = 2e-10
 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 10/117 (8%)

Query: 493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHW 552
           +WL      G          G   +H+AAA GY   ++ +I      N +D  G T LH 
Sbjct: 183 QWLN----SGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHA 238

Query: 553 ASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADL 609
           A+++G+EE   +LV+      AV         GQTA D+A       +     + +L
Sbjct: 239 AAHWGKEEACRILVENLCDMEAVNK------VGQTAFDVADEDILGYLEELQKKQNL 289

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 56.0 bits (136), Expect = 2e-08
 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 7/102 (6%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
            K   V  D G  V   A + G    +  ++  G   N+ +  G TALH A      + V
Sbjct: 31  RKKTKVKFDDGA-VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMV 89

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             LV+ GA     ++       G      A+S G+  IA YL
Sbjct: 90  KFLVENGANINQPDN------EGWIPLHAAASCGYLDIAEYL 125

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 50.6 bits (122), Expect = 1e-06
 Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 8/94 (8%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
                +    A + + +  ++       G TALH A+  G  E + +L++        + 
Sbjct: 171 KEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYLAE--ADL 609
                  G T    A+  G +     L E   D+
Sbjct: 231 ------DGWTPLHAAAHWGKEEACRILVENLCDM 258

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 47.5 bits (114), Expect = 9e-06
 Identities = 11/65 (16%), Positives = 15/65 (23%), Gaps = 7/65 (10%)

Query: 540 NFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKG 599
              DA+ +       + G E  +   V               F  G      A S G   
Sbjct: 2   KMADAKQKRNEQLKRWIGSETDLEPPVVKRK------KTKVKFDDG-AVFLAACSSGDTE 54

Query: 600 IAGYL 604
               L
Sbjct: 55  EVLRL 59

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 46.3 bits (111), Expect = 2e-05
 Identities = 18/87 (20%), Positives = 28/87 (32%), Gaps = 7/87 (8%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
            L   +G E  + P +        +   G   L  A   G  E V+ L++ GA       
Sbjct: 13  QLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLA-ACSSGDTEEVLRLLERGADINYANV 71

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                  G TA   A    +  +  +L
Sbjct: 72  ------DGLTALHQACIDDNVDMVKFL 92

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 45.2 bits (108), Expect = 4e-05
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 21/119 (17%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D+ G   +H AA+ GY      +I+ G      ++ G T L  A     EE +   V
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159

Query: 567 KLGAAPGAVEDPTPAFPG---------------------GQTAADLASSRGHKGIAGYL 604
                                                  G TA  +A+++G+  +   L
Sbjct: 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           P++ +D G   +H A   G+   ++ ++  GV+ N  D+ G T LH A+     +    L
Sbjct: 63  PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADL--ASSRGHKGIAGYL 604
           V+ GAA  A+          QTAAD       G+   + +L
Sbjct: 123 VESGAAVFAMTY-----SDMQTAADKCEEMEEGYTQCSQFL 158

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 56.5 bits (137), Expect = 6e-09
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 504 KGPNV-IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
            G  V  +     ++  ++  G    ++ II     P+  +  G TALH A   G  E V
Sbjct: 27  HGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIV 86

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             LV+ G    A +        G T    A+S  +  +  +L
Sbjct: 87  KFLVQFGVNVNAADS------DGWTPLHCAASCNNVQVCKFL 122

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 47.2 bits (113), Expect = 7e-06
 Identities = 6/62 (9%), Positives = 14/62 (22%), Gaps = 7/62 (11%)

Query: 543 DARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAG 602
           +  G+ +L         +T    +  G                      +S  G   +  
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPL-------PLALLLDSSLEGEFDLVQ 54

Query: 603 YL 604
            +
Sbjct: 55  RI 56

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 10/98 (10%), Positives = 24/98 (24%), Gaps = 14/98 (14%)

Query: 540 NFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKG 599
            + D +           G  +    L  +    G +        G   A      +    
Sbjct: 133 TYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNK------GVIYALWDYEPQNDDE 186

Query: 600 IAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANE 637
           +   + E D       +T+     ++      A   ++
Sbjct: 187 LP--MKEGD------CMTIIHREDEDEIEWWWARLNDK 216

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 60.6 bits (148), Expect = 2e-10
 Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 11/128 (8%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGREETVIML 565
              +  G   +HLA+  GY   +  +++ G   N ++   GRTALH A      + V +L
Sbjct: 111 KATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLL 170

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN 625
           +K GA    V         G +   L   R    I   L        L +L +     D 
Sbjct: 171 LKCGADVNRVTY------QGYSPYQLTWGRPSTRIQQQL----GQLTLENLQMLPESEDE 220

Query: 626 VAAALAAE 633
            +    +E
Sbjct: 221 ESYDTESE 228

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 60.6 bits (148), Expect = 3e-10
 Identities = 31/136 (22%), Positives = 47/136 (34%), Gaps = 13/136 (9%)

Query: 469 MAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWA 528
           +AI  +      ++I+ +  +                 N  ++  Q  +HLA        
Sbjct: 14  LAIIHEEKALTMEVIRQVKGD-------------LAFLNFQNNLQQTPLHLAVITNQPEI 60

Query: 529 MRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTA 588
              ++  G  P  RD RG T LH A   G   +V +L +    P            G T 
Sbjct: 61  AEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTC 120

Query: 589 ADLASSRGHKGIAGYL 604
             LAS  G+ GI   L
Sbjct: 121 LHLASIHGYLGIVELL 136

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 11/105 (10%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSP------NFRDARGRTALHWASYFGRE 559
           P + D  G   +HLA   G   ++  +  +  +P         +  G T LH AS  G  
Sbjct: 71  PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL 130

Query: 560 ETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             V +LV LGA   A E        G+TA  LA    +  +   L
Sbjct: 131 GIVELLVSLGADVNAQEP-----CNGRTALHLAVDLQNPDLVSLL 170

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 10/84 (11%), Positives = 19/84 (22%), Gaps = 6/84 (7%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           HLA  L     +  ++  G   N    +G +                L +L        +
Sbjct: 156 HLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL------E 209

Query: 578 PTPAFPGGQTAADLASSRGHKGIA 601
                P  +      +        
Sbjct: 210 NLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 41.0 bits (97), Expect = 9e-04
 Identities = 12/66 (18%), Positives = 19/66 (28%), Gaps = 10/66 (15%)

Query: 543 DARGRTALHWASYFGREETVIMLVKL----GAAPGAVEDPTPAFPGGQTAADLASSRGHK 598
              G + LH A     +   + +++      A      +        QT   LA      
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN------LQQTPLHLAVITNQP 58

Query: 599 GIAGYL 604
            IA  L
Sbjct: 59  EIAEAL 64

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 60.2 bits (147), Expect = 2e-10
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           + +D  G   +++A         + +I  G   N +++   +   +A   GR E +  ++
Sbjct: 33  DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYML 92

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           K         D       G  A   A+ +GH      L
Sbjct: 93  KHATP-----DLNKHNRYGGNALIPAAEKGHIDNVKLL 125

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 59.8 bits (146), Expect = 3e-10
 Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 6/95 (6%)

Query: 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
                 ++  A     +     +  T    +  D  G T L+ A +    E    L+  G
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 570 AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           A                +    A ++G   I  Y+
Sbjct: 63  ADINLQNS------ISDSPYLYAGAQGRTEILAYM 91

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 49.0 bits (118), Expect = 1e-06
 Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 12/116 (10%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYF- 556
           +       N  +  G   +  AA  G+   ++ ++  G    +F++  G TAL  A    
Sbjct: 92  LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151

Query: 557 ----GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 608
                 ++ V +L++ GA     ++       G+TA D A+ +G+  I+  LA+ +
Sbjct: 152 EGNQLYQDIVKLLMENGADQSIKDN------SGRTAMDYANQKGYTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 47.1 bits (113), Expect = 6e-06
 Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 6/63 (9%)

Query: 542 RDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIA 601
           +       L  A+    ++   +L         V+        G T  ++A       IA
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDT------EGNTPLNIAVHNNDIEIA 55

Query: 602 GYL 604
             L
Sbjct: 56  KAL 58

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 46.3 bits (111), Expect = 1e-05
 Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 11/104 (10%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGREETVIML 565
           N+ +         A A G    +  ++       N  +  G  AL  A+  G  + V +L
Sbjct: 66  NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLL 125

Query: 566 VKLGAAPGAVEDPTPAFPGGQTA-----ADLASSRGHKGIAGYL 604
           ++ G       D       G TA          ++ ++ I   L
Sbjct: 126 LEDGRE-----DIDFQNDFGYTALIEAVGLREGNQLYQDIVKLL 164

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 57.0 bits (139), Expect = 3e-10
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           HLAA  G+   ++ ++  G   N +D  GRT LH A+  G  E V +L++ GA   A + 
Sbjct: 7   HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 66

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                  G+T   LA+  GH  +   L
Sbjct: 67  ------NGRTPLHLAARNGHLEVVKLL 87

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 50.0 bits (121), Expect = 6e-08
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           GRT LH A+  G  E V +L++ GA   A +        G+T   LA+  GH  +   L
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDK------NGRTPLHLAARNGHLEVVKLL 54

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 47.7 bits (115), Expect = 4e-07
 Identities = 23/64 (35%), Positives = 35/64 (54%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D  G+  +HLAA  G+   ++ ++  G   N +D  GRT LH A+  G  E V +L+
Sbjct: 29  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88

Query: 567 KLGA 570
           + GA
Sbjct: 89  EAGA 92

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 58.2 bits (142), Expect = 3e-10
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 21/133 (15%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           H+A+  G   ++  ++  G  PN +D  G T LH A   G  + V +L++  A       
Sbjct: 15  HIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGY 74

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYLAE--ADLSS---------HLSSLTVNENGMDNV 626
                    +    A+  GH  I   L    A  ++           +     +  M ++
Sbjct: 75  ------QNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTD----DESMKSL 124

Query: 627 AAALAAEKANETA 639
                  +++  +
Sbjct: 125 LLLPEKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 52.8 bits (128), Expect = 2e-08
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 7/69 (10%)

Query: 536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595
           G+ P   + RG T LH AS  G   +V  L++ G+ P   +        G T    A + 
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDH------AGWTPLHEACNH 53

Query: 596 GHKGIAGYL 604
           GH  +   L
Sbjct: 54  GHLKVVELL 62

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 61.7 bits (151), Expect = 3e-10
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 506 PNVIDDGGQGVVHLAAALG-YEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIM 564
             +  +  +  +  AA  G  E  M  +    V+ +  D R  T LH A+ + R   V +
Sbjct: 17  AVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQL 76

Query: 565 LVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           L++ GA   A +       GG      A S GH  +   L
Sbjct: 77  LLQHGADVHAKDK------GGLVPLHNACSYGHYEVTELL 110

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 60.6 bits (148), Expect = 7e-10
 Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 10/131 (7%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           +  D GG   +H A + G+      ++  G   N  D    T LH A+   R E   +L+
Sbjct: 85  HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL 144

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNV 626
             GA      DPT     G++A D+A +   +    Y  +       +     E  +  V
Sbjct: 145 SHGA------DPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAR----EADLAKV 194

Query: 627 AAALAAEKANE 637
              LA E  N 
Sbjct: 195 KKTLALEIINF 205

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 58.3 bits (142), Expect = 4e-09
 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           +  D      +HLAA       ++ ++  G   + +D  G   LH A  +G  E   +L+
Sbjct: 52  HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL 111

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           K GA   A++          T    A+S+    +   L
Sbjct: 112 KHGACVNAMDL------WQFTPLHEAASKNRVEVCSLL 143

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 57.9 bits (141), Expect = 6e-09
 Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 9/102 (8%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWA---MRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
                   +  +H A A  +         ++  G + N ++    T LH A+     + +
Sbjct: 204 NFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVM 263

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +L K GA   A++        GQTA   A+  GH      L
Sbjct: 264 EVLHKHGAKMNALDS------LGQTALHRAALAGHLQTCRLL 299

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 52.1 bits (126), Expect = 4e-07
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 6/88 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N  +      +H+AA   +   M  +   G   N  D+ G+TALH A+  G  +T  +L
Sbjct: 240 VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLL 299

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLAS 593
           +  G+ P  +         G TAA + +
Sbjct: 300 LSYGSDPSIISL------QGFTAAQMGN 321

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 45.9 bits (110), Expect = 3e-05
 Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 9/94 (9%)

Query: 514 QGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS---YFGREETVIMLVKLGA 570
              +  AA       ++  +A  +    +     TALH A    +  R++   +L++ GA
Sbjct: 179 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGA 238

Query: 571 APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
                           T   +A+ R H  +   L
Sbjct: 239 NVNEKNK------DFMTPLHVAAERAHNDVMEVL 266

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 43.3 bits (103), Expect = 2e-04
 Identities = 11/74 (14%), Positives = 18/74 (24%), Gaps = 7/74 (9%)

Query: 532 IIATGVSPNFRDARGRTALHW-ASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAAD 590
           +              +  L   A     E+ + +L  L     A +          T   
Sbjct: 10  LADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDG------RKSTPLH 63

Query: 591 LASSRGHKGIAGYL 604
           LA+      I   L
Sbjct: 64  LAAGYNRVRIVQLL 77

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 57.4 bits (140), Expect = 4e-10
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           HLAA  G+   ++ ++  G   N +D  GRT LH A+  G  E V +L++ GA   A + 
Sbjct: 7   HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 66

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                  G+T   LA+  GH  +   L
Sbjct: 67  ------NGRTPLHLAARNGHLEVVKLL 87

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 56.6 bits (138), Expect = 7e-10
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D  G+  +HLAA  G+   ++ ++  G   N +D  GRT LH A+  G  E V +L+
Sbjct: 29  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           + GA   A +        G+T   LA+  GH  +   L
Sbjct: 89  EAGADVNAKDK------NGRTPLHLAARNGHLEVVKLL 120

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 48.9 bits (118), Expect = 3e-07
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           GRT LH A+  G  E V +L++ GA   A +        G+T   LA+  GH  +   L
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDK------NGRTPLHLAARNGHLEVVKLL 54

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 46.6 bits (112), Expect = 2e-06
 Identities = 23/64 (35%), Positives = 35/64 (54%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D  G+  +HLAA  G+   ++ ++  G   N +D  GRT LH A+  G  E V +L+
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121

Query: 567 KLGA 570
           + GA
Sbjct: 122 EAGA 125

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 57.5 bits (140), Expect = 5e-10
 Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 10/111 (9%)

Query: 502 GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREET 561
           G  G +++       +  AAA G    +R ++  G  PN  +  GR  +      G  + 
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQV 59

Query: 562 VIMLVKLGAAPGAVEDPTPAFPGGQTAA-DLASSRGHKGIAGYL--AEADL 609
             +L+  GA      +P  A P   T     A+  G       L  A A L
Sbjct: 60  AELLLLHGA------EPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 51.3 bits (124), Expect = 6e-08
 Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 20/103 (19%)

Query: 536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595
               +         L  A+  G+ ETV  L++ GA P A+         G+    +    
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNR------FGRRPIQVM-MM 54

Query: 596 GHKGIAGYLAE--ADLSSHLSSLTVNENGMDNVAAAL--AAEK 634
           G   +A  L    A+          N      +   +  AA +
Sbjct: 55  GSAQVAELLLLHGAE---------PNCADPATLTRPVHDAARE 88

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 49.0 bits (118), Expect = 4e-07
 Identities = 16/66 (24%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 506 PNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIM 564
           PN  D       VH AA  G+   +  +   G   +  DA GR  +  A   G  +    
Sbjct: 70  PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARY 129

Query: 565 LVKLGA 570
           L     
Sbjct: 130 LHAATG 135

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 60.7 bits (148), Expect = 7e-10
 Identities = 35/144 (24%), Positives = 49/144 (34%), Gaps = 15/144 (10%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
              DD     +H+AA  G    +R +I TGVSP  ++  G TALH A  FG  +T   L 
Sbjct: 14  IKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLA 73

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTV-NENGMDN 625
            +G               GQ    LA       +   L E          ++ NE     
Sbjct: 74  SVGEVHSLWH--------GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDERE 125

Query: 626 VAAALAAEKANE------TAAQIG 643
           V    +  K  +          +G
Sbjct: 126 VNEIGSHVKHCKGQTALHWCVGLG 149

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 58.0 bits (141), Expect = 6e-09
 Identities = 16/139 (11%), Positives = 35/139 (25%), Gaps = 16/139 (11%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAM-----RPIIATGVSPNFRDARGRTALHWASYFGREE 560
           P   D   +  +  A       A+          + +  ++ + +G + LHWA     E+
Sbjct: 166 PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWED 225

Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNE 620
             +  V++G      ++             L+       +   L             +  
Sbjct: 226 VAMRFVEMGIDVNMEDN------EHTVPLYLSVRAAMVLLTKELL-----QKTDVFLIQA 274

Query: 621 NGMDNVAAALAAEKANETA 639
               N    L         
Sbjct: 275 CPYHNGTTVLPDRVVWLDF 293

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 58.0 bits (141), Expect = 6e-09
 Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 5/103 (4%)

Query: 505 GPNVIDDGGQGVVHLAAALGYEWA--MRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G +V    GQ  +H    LG E+   ++ ++  G SP  +D    T L  A  F   E +
Sbjct: 130 GSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREAL 189

Query: 563 IMLVKLGAAP-GAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +++    +          A   G +    A     + +A   
Sbjct: 190 DLMMDTVPSKSSL--RLDYANKQGNSHLHWAILINWEDVAMRF 230

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 52.9 bits (128), Expect = 2e-07
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 6/69 (8%)

Query: 536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR 595
            ++    D      +H A+  G+ + V  L++ G +P            G TA  LA   
Sbjct: 10  KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR------FGCTALHLACKF 63

Query: 596 GHKGIAGYL 604
           G    A YL
Sbjct: 64  GCVDTAKYL 72

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 52.9 bits (128), Expect = 3e-07
 Identities = 7/90 (7%), Positives = 16/90 (17%), Gaps = 6/90 (6%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G             V  AA    +  ++ +             G                
Sbjct: 280 GTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVK 339

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLA 592
            M +   A                 ++ ++
Sbjct: 340 RMKLAPSAPVRTRSR------SRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 52.6 bits (127), Expect = 3e-07
 Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 14/105 (13%)

Query: 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRE--ETVIMLVK 567
            + GQ    L                 +  + +  +G+TALHW    G E  E + +LV+
Sbjct: 108 KERGQMPESLLNECDE------REVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ 161

Query: 568 LGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSH 612
           LGA+P A +         +T    A    ++     + +   S  
Sbjct: 162 LGASPTAKDK------ADETPLMRAMEFRNREALDLMMDTVPSKS 200

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 49.9 bits (120), Expect = 2e-06
 Identities = 9/112 (8%), Positives = 25/112 (22%), Gaps = 19/112 (16%)

Query: 506 PNVIDDGGQGVVHLAAALGYE-------------WAMRPIIATGVSPNFRDARGRTALHW 552
            N+ D+     ++L+                            G +           +  
Sbjct: 237 VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPA 296

Query: 553 ASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           A+   ++E + +L +         +       G   A     +    +    
Sbjct: 297 AADPSKQEVLQLLQEKLDEVVRSLN------TGAGGAVKRKKKAAPAVKRMK 342

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 57.8 bits (141), Expect = 7e-10
 Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D  G   +HLAA  G+   +  ++  G   N  D  G T L  A+ FG  E V +L+
Sbjct: 41  NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLL 100

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           K GA   A +        G T   LA+  GH  I   L
Sbjct: 101 KNGADVNANDM------EGHTPLHLAAMFGHLEIVEVL 132

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 57.8 bits (141), Expect = 8e-10
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N +D  G   + LAA  G+   +  ++  G   N  D  G T LH A+ FG  E V +L+
Sbjct: 74  NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLL 133

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           K GA   A +        G+TA D++   G++ +A  L
Sbjct: 134 KNGADVNAQDK------FGKTAFDISIDNGNEDLAEIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 54.3 bits (132), Expect = 1e-08
 Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
             AA  G +  +R ++A G   N  DA G T LH A++ G  E V +L+K GA   AV+ 
Sbjct: 19  LEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH 78

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                  G T   LA+  GH  I   L
Sbjct: 79  ------AGMTPLRLAALFGHLEIVEVL 99

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 43.9 bits (105), Expect = 4e-05
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 543 DARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAG 602
            +     L  A+  GR++ V +L+  GA   A +        G T   LA+  GH  I  
Sbjct: 11  GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDA------SGWTPLHLAAFNGHLEIVE 64

Query: 603 YL 604
            L
Sbjct: 65  VL 66

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 42.0 bits (100), Expect = 2e-04
 Identities = 18/61 (29%), Positives = 28/61 (45%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D  G   +HLAA  G+   +  ++  G   N +D  G+TA   +   G E+   +L 
Sbjct: 107 NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

Query: 567 K 567
           K
Sbjct: 167 K 167

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 56.6 bits (138), Expect = 8e-10
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N   +GG+  +H AA  G    +  ++  G   N  D    T L  A Y G    V +L
Sbjct: 33  VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLL 92

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGI 600
           +  GA      D T   P G TA +   ++  K +
Sbjct: 93  LSKGA------DKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 55.1 bits (134), Expect = 2e-09
 Identities = 21/87 (24%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
             A   G    ++  +A G   N     GR  LH+A+  G+ E +  L+  GA   A + 
Sbjct: 12  MWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK 71

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                    T    A   GH      L
Sbjct: 72  ------HHITPLLSAVYEGHVSCVKLL 92

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 47.4 bits (114), Expect = 1e-06
 Identities = 12/59 (20%), Positives = 17/59 (28%), Gaps = 6/59 (10%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
                 WA   G  + V   V  G       +      GG+     A+  G   I  +L
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLE------GGRKPLHYAADCGQLEILEFL 59

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 59.0 bits (144), Expect = 1e-09
 Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 6/87 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
             A        ++ ++  G + N +   G +ALH AS  G    V  LV+ GA       
Sbjct: 155 IHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC 214

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                    T   +A SR    I    
Sbjct: 215 ------HNDTPLMVARSRRVIDILRGK 235

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 57.5 bits (140), Expect = 3e-09
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 15/123 (12%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPII----ATGVSPNFRDARGRTALHWASYFGREETV 562
              D+ G   +H+A   G   A+  ++      G   +  +   +T LH A        V
Sbjct: 3   TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVV 62

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENG 622
            +LV  GA+P A++        GQTAA LA           L         +  T++   
Sbjct: 63  RLLVTAGASPMALDR------HGQTAAHLACEHRSPTCLRALL-----DSAAPGTLDLEA 111

Query: 623 MDN 625
            + 
Sbjct: 112 RNY 114

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 55.2 bits (134), Expect = 2e-08
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGREETVIML 565
              +  G   +H+A     +  ++ ++  G   +  D + GR+ L  A        V +L
Sbjct: 110 EARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL 169

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           ++ GA   A          G +A   AS RG   +   L
Sbjct: 170 LQHGANVNAQMY------SGSSALHSASGRGLLPLVRTL 202

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 52.8 bits (128), Expect = 9e-08
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSP----NFRDARGRTALHWASYFGREET 561
           P  +D  GQ   HLA        +R ++ +          R+  G TALH A     +ET
Sbjct: 72  PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET 131

Query: 562 VIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           V +L++ GA   AV+        G++    A       +   L
Sbjct: 132 VQLLLERGADIDAVDI-----KSGRSPLIHAVENNSLSMVQLL 169

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 47.8 bits (115), Expect = 4e-06
 Identities = 11/64 (17%), Positives = 22/64 (34%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N     G   +H A+  G    +R ++ +G   + ++    T L  A      + +    
Sbjct: 177 NAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA 236

Query: 567 KLGA 570
              A
Sbjct: 237 TRPA 240

>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A Length = 138

 Score = 56.6 bits (136), Expect = 1e-09
 Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 23/139 (16%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAP 367
            I+  SP   ++     V+IIG                +FG + V +E++T + IR Q P
Sbjct: 7   CIKAISPSEGWTTGGATVIIIGDNF-------FDGLQVVFGTMLVWSELITPHAIRVQTP 59

Query: 368 -SHAAGRVPFYITGSNRLACSEV---------------REFEYREKPSKAGYPVASKIAP 411
             H  G V   ++  ++  C                    F+  +K          ++  
Sbjct: 60  PRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPK 119

Query: 412 EDEVRLQTRLAKFLYLDPE 430
           E  ++    L + LY  P 
Sbjct: 120 EVLLKRAADLVEALYGMPH 138

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 509 IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL 568
           +       +  AA  G +  +R ++A G     +D  G T LH A+  G  E V +L++ 
Sbjct: 20  MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEA 79

Query: 569 GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           GA      D       G+TA D++   G++ +A  L
Sbjct: 80  GA------DVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 57.8 bits (141), Expect = 1e-09
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D  G+  +  +   GY      ++  G + N R+  G T L  AS +GR E V  L+
Sbjct: 95  NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +LGA   A +        G TA   A   G + +    
Sbjct: 155 ELGADISARDL------TGLTAEASARIFGRQEVIKIF 186

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 55.5 bits (135), Expect = 8e-09
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D   +  + +A  LG E A+  ++        +D  G TAL WA    R      L+
Sbjct: 29  NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL 88

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             G+     +        G+T    +   G+  ++ +L
Sbjct: 89  SKGSNVNTKDF------SGKTPLMWSIIFGYSEMSYFL 120

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 53.9 bits (131), Expect = 2e-08
 Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
              D  G   +  A           +++ G + N +D  G+T L W+  FG  E    L+
Sbjct: 62  EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL 121

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           + GA              G+T   +AS  G   I   L
Sbjct: 122 EHGANVNDRNL------EGETPLIVASKYGRSEIVKKL 153

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 43.5 bits (104), Expect = 9e-05
 Identities = 16/65 (24%), Positives = 31/65 (47%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  +  G+  + +A+  G    ++ ++  G   + RD  G TA   A  FGR+E + +  
Sbjct: 128 NDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187

Query: 567 KLGAA 571
           ++  A
Sbjct: 188 EVRRA 192

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 56.2 bits (137), Expect = 1e-09
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  D+ G   ++LA A G+   +  ++  G   N  DA G T LH A++ G  E   +L+
Sbjct: 41  NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLL 100

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           K GA   A +        G+TA D++   G++ +A  L
Sbjct: 101 KHGADVNAQDK------FGKTAFDISIGNGNEDLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 50.8 bits (123), Expect = 9e-08
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
             AA  G +  +R ++A G   N +D  G T L+ A+  G  E V +L+K GA   AV+ 
Sbjct: 19  LEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDA 78

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                  G T   LA+  GH  IA  L
Sbjct: 79  ------IGFTPLHLAAFIGHLEIAEVL 99

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 41.2 bits (98), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 544 ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGY 603
           +     L  A+  G+++ V +L+  GA   A ++       G T   LA++ GH  I   
Sbjct: 12  SDLGKKLLEAARAGQDDEVRILMANGADVNAKDE------YGLTPLYLATAHGHLEIVEV 65

Query: 604 L 604
           L
Sbjct: 66  L 66

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 40.4 bits (96), Expect = 3e-04
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N +D  G   +HLAA +G+      ++  G   N +D  G+TA   +   G E+   +L 
Sbjct: 74  NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

Query: 567 K 567
           K
Sbjct: 134 K 134

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 60.9 bits (148), Expect = 1e-09
 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 16/146 (10%)

Query: 717 EDYLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV--VWSVSIVE 774
            D L  A I+IQ+  RGW  RK ++++R   + +Q +VRGHQ R     +    +  I++
Sbjct: 764 ADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQ 823

Query: 775 KAILRWRRR-------------GSGLRGFRVGNSTANVASENEKTDEYEFLR-IGRKQKF 820
           K    +  R              + LRG+ V N    +  E++     + +R    +  +
Sbjct: 824 KFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHY 883

Query: 821 AGVEKALERVKSMVRNPEARDQYMRM 846
               KA+  ++   R   A+ +  ++
Sbjct: 884 HRTLKAIVYLQCCYRRMMAKRELKKL 909

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 59.1 bits (144), Expect = 2e-09
 Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 8/102 (7%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
            K     D  G    + A A      +  ++  G   N  +      LH A+     + V
Sbjct: 21  SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIV 78

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            +L+  G      +D       G TA   A   G+       
Sbjct: 79  KILLFSGLDDSQFDD------KGNTALYYAVDSGNMQTVKLF 114

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 57.2 bits (139), Expect = 5e-09
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           H AA L     ++ ++ +G+  +  D +G TAL++A   G  +TV + VK          
Sbjct: 67  HQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK 126

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                 G +T+   A       I  Y 
Sbjct: 127 -----TGWKTSFYHAVMLNDVSIVSYF 148

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 49.8 bits (120), Expect = 2e-06
 Identities = 12/96 (12%), Positives = 25/96 (26%), Gaps = 8/96 (8%)

Query: 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
             G +   + A  L     +   ++      F  A   + +H     G  + +I+L+   
Sbjct: 126 KTGWKTSFYHAVMLNDVSIVSYFLSEI-PSTFDLAILLSCIHITIKNGHVDMMILLLDYM 184

Query: 570 AAPGAVEDPTPAFPGGQTAA-DLASSRGHKGIAGYL 604
            +                    LA       +   L
Sbjct: 185 TSTNTNNS------LLFIPDIKLAIDNKDIEMLQAL 214

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 45.2 bits (108), Expect = 5e-05
 Identities = 14/103 (13%), Positives = 27/103 (26%), Gaps = 15/103 (14%)

Query: 504 KGPNVIDDG-GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT-ALHWASYFGREET 561
           + P+  D       +H+    G+   M  ++    S N  ++      +  A      E 
Sbjct: 151 EIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEM 210

Query: 562 VIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +  L K                   +A           IA  +
Sbjct: 211 LQALFKYDINI-------------YSANLENVLLDDAEIAKMI 240

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 55.1 bits (134), Expect = 2e-09
 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 6/100 (6%)

Query: 505 GPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIM 564
           G       G   +H AA  G+   ++ +++ G   N R   G T LH A+  G  E V +
Sbjct: 1   GHMWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKL 60

Query: 565 LVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           L+  GA   A          G T   LA   GH  I   L
Sbjct: 61  LLAKGADVNARSK------DGNTPEHLAKKNGHHEIVKLL 94

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 45.1 bits (108), Expect = 7e-06
 Identities = 21/64 (32%), Positives = 28/64 (43%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N     G   +HLAA  G+   ++ ++A G   N R   G T  H A   G  E V +L 
Sbjct: 36  NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLD 95

Query: 567 KLGA 570
             GA
Sbjct: 96  AKGA 99

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           P+  ++ G   +H A        +  +I  G + N  D+ G T LH A+        + L
Sbjct: 47  PSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMAL 106

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASS--RGHKGIAGYLAE 606
           V+ GAA  A          G TA +       G+   A YLA+
Sbjct: 107 VQHGAAIFATTLSD-----GATAFEKCDPYREGYADCATYLAD 144

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 6/92 (6%)

Query: 513 GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP 572
              ++  AA  G    ++  +     P+  +  G TALH A        V  L+  GA  
Sbjct: 21  PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80

Query: 573 GAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            + +        G T    A+S     I   L
Sbjct: 81  NSPDS------HGWTPLHCAASCNDTVICMAL 106

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 518 HLAAALGYEWAMRPI---IATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGA 574
           HLA       ++  +   +    + + +  +G TALH+       E + +L++  A+   
Sbjct: 174 HLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEI 233

Query: 575 VEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
                     G+T  D+A    H+     L +A
Sbjct: 234 AN------ESGETPLDIAKRLKHEHCEELLTQA 260

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 57.5 bits (140), Expect = 2e-09
 Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 500 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRE 559
                  N I + G   +HLA    +    + +I  G S   +D   +  LH A+  G  
Sbjct: 94  RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 153

Query: 560 ETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSH 612
           + + +L  LG +    +D       G T    A + GH   A  L    +  +
Sbjct: 154 KLIELLCGLGKSAVNWQDKQ-----GWTPLFHALAEGHGDAAVLL----VEKY 197

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 55.9 bits (136), Expect = 8e-09
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 4/88 (4%)

Query: 518 HLAAALGYEWAMRPI-IATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVE 576
           H A      + ++ +  +       +D  GR  LHW+  F   E    L+         +
Sbjct: 7   HQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDD 66

Query: 577 DPTPAFPGGQTAADLASSRGHKGIAGYL 604
            P  +   G T   +A S G+  +   L
Sbjct: 67  YPDDS---GWTPFHIACSVGNLEVVKSL 91

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 51.3 bits (124), Expect = 3e-07
 Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 7/102 (6%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR---GRTALHWASYFGREETV 562
               D  G+  +H + +         +++   + N  D     G T  H A   G  E V
Sbjct: 29  LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVV 88

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             L           D       G T   LA  +    ++ +L
Sbjct: 89  KSLYDRPL--KP--DLNKITNQGVTCLHLAVGKKWFEVSQFL 126

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 41.7 bits (99), Expect = 4e-04
 Identities = 8/60 (13%), Positives = 15/60 (25%), Gaps = 7/60 (11%)

Query: 546 GRTALHWASYFGR-EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
               LH A       +   +L    +     +        G+     + S     I  +L
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQ------DGRIPLHWSVSFQAHEITSFL 55

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 55.9 bits (136), Expect = 3e-09
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 5/99 (5%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
           P++ D  G  V+H AA  G+   ++ ++      N  D  G   LH A+  G    V  L
Sbjct: 63  PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           VK  A      +       G TA DLA   G   +   +
Sbjct: 123 VKHTA-----SNVGHRNHKGDTACDLARLYGRNEVVSLM 156

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 54.3 bits (132), Expect = 9e-09
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 7/98 (7%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  +  G+  +     LG     R ++  G +P+ +D  G   +H A+  G  +T+  L+
Sbjct: 32  NAQNGFGRTALQ-VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLL 90

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           +  A     ++       G     LA+  GH  +  +L
Sbjct: 91  EFQADVNIEDN------EGNLPLHLAAKEGHLRVVEFL 122

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 52.8 bits (128), Expect = 4e-08
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 7/96 (7%)

Query: 509 IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL 568
           + +     +  AAA G    +  ++   V+ N ++  GRTAL      G  E    L+  
Sbjct: 1   MAEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLR 59

Query: 569 GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           GA P   +        G      A+  G       L
Sbjct: 60  GANPDLKDR------TGFAVIHDAARAGFLDTLQTL 89

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 45.8 bits (110), Expect = 8e-06
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGREETVIML 565
           N+ D+ G   +HLAA  G+   +  ++     +   R+ +G TA   A  +GR E V ++
Sbjct: 97  NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156

Query: 566 VKLGAA 571
              GA 
Sbjct: 157 QANGAG 162

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)

Query: 513 GQGVVHLAAALGYEW---AMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
            + V+HLA  +  +     +  II  G   + + A G TALH+A+ + + + + +L+K  
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 570 AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADL 609
           A  G V +       G+TA D+A  + HK     L +A  
Sbjct: 250 ALVGTVNE------AGETALDIARKKHHKECEELLEQAQA 283

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 58.4 bits (142), Expect = 4e-09
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 502 GGKGPNVIDDGGQGVVHLAAALGY-EWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 560
           G    +     G+  +H AA +         +   G + + +D  G+T +  A+  GR E
Sbjct: 268 GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE 327

Query: 561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            V+ L++ GA+  AV+          TA  LA +  H  I    
Sbjct: 328 VVMYLIQQGASVEAVDA------TDHTARQLAQANNHHNIVDIF 365

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 57.7 bits (140), Expect = 7e-09
 Identities = 24/110 (21%), Positives = 37/110 (33%), Gaps = 15/110 (13%)

Query: 504 KGPNVI-DDGGQGVVHLAAALGYE--------WAMRPIIATGVSPNFRDARGRTALHWAS 554
           +  N+I     + V+H  A+               +  IA G   N  D    T L  A 
Sbjct: 115 ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAV 174

Query: 555 YFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
              R   V  L+K GA P             ++A   A++    G+  Y+
Sbjct: 175 LARRRRLVAYLMKAGADPTIYNK------SERSALHQAAANRDFGMMVYM 218

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 55.3 bits (134), Expect = 4e-08
 Identities = 15/155 (9%), Positives = 37/155 (23%), Gaps = 11/155 (7%)

Query: 471 IEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMR 530
           +E +  N ++       ++ L     +  +   +  N +              G ++   
Sbjct: 21  MENEEKNRKNHQSITSSQHSL-LEASYDGYIK-RQRNELQHYSLYPNPQGYGNGNDFLGD 78

Query: 531 PIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAAD 590
                   P   +      LH  +  G       + +                  +T   
Sbjct: 79  FNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNIIDPRH-------NRTVLH 130

Query: 591 LASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN 625
             +S      +  L     +    +   + N MD 
Sbjct: 131 WIASNSSAEKSEDLI-VHEAKECIAAGADVNAMDC 164

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 51.9 bits (125), Expect = 5e-07
 Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 16/128 (12%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
            N +D      + LA        +  ++  G  P   +   R+ALH A+       ++ +
Sbjct: 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYM 218

Query: 566 V---KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKG---IAGYL----AEADLSSHLSS 615
           +   KL      ++        G TA  + +    +     A  L    A+ D       
Sbjct: 219 LNSTKLKGDIEELDR------NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 272

Query: 616 LTVNENGM 623
            +    G 
Sbjct: 273 DSEKYKGR 280

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 47.6 bits (114), Expect = 1e-05
 Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 18/110 (16%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPI-----------IATGVSPNFRDARGRTALHWASY 555
             +D  G   + + A       +                     +    +GRTALH+A+ 
Sbjct: 229 EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQ 288

Query: 556 FGREETVIMLV-KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
                 V  LV + G+     ++       G+T   LA+  G   +  YL
Sbjct: 289 VSNMPIVKYLVGEKGSNKDKQDE------DGKTPIMLAAQEGRIEVVMYL 332

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 46.9 bits (112), Expect = 2e-05
 Identities = 17/72 (23%), Positives = 26/72 (36%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 558
           + E G   +  D+ G+  + LAA  G    +  +I  G S    DA   TA   A     
Sbjct: 299 VGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNH 358

Query: 559 EETVIMLVKLGA 570
              V +  +   
Sbjct: 359 HNIVDIFDRCRP 370

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 56.8 bits (138), Expect = 5e-09
 Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 4/91 (4%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL----GAAPG 573
             AA +G E  +R +I  G     +D+ G T LH       +     +  L         
Sbjct: 126 SFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185

Query: 574 AVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
                      G T   LA   G+  +  +L
Sbjct: 186 LKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 21/111 (18%), Positives = 32/111 (28%), Gaps = 12/111 (10%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATG-----VSPNFRDARGRTALHWASYFGREE 560
            +     G+  +H+AA      A   ++                 G+TALH A       
Sbjct: 30  VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVN 89

Query: 561 TVIMLVKLGA-------APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            V  L+  GA              P      G+     A+  G + I   L
Sbjct: 90  LVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLL 140

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 518 HLAAALGYEWAMRPI-IATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVE 576
            LAA      A+  +    G   + R A G TALH A+ +   E  ++L++        E
Sbjct: 8   LLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVF-E 66

Query: 577 DPTPAFPGGQTAADLASSRGHKGIAGYL 604
             T     GQTA  +A    +  +   L
Sbjct: 67  PMTSELYEGQTALHIAVINQNVNLVRAL 94

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 49.1 bits (118), Expect = 2e-06
 Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 25/139 (17%)

Query: 504 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-------------ARGRTAL 550
           +        GQ  +H+A        +R ++A G S + R                G   L
Sbjct: 66  EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPL 125

Query: 551 HWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE---- 606
            +A+  G EE V +L++ GA   A +        G T   +   + +K  A  +      
Sbjct: 126 SFAACVGSEEIVRLLIEHGADIRAQDS------LGNTVLHILILQPNKTFACQMYNLLLS 179

Query: 607 --ADLSSHLSSLTVNENGM 623
                      L  N  G+
Sbjct: 180 YDGGDHLKSLELVPNNQGL 198

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 8/111 (7%), Positives = 20/111 (18%), Gaps = 11/111 (9%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPI------IATGVSPNFRDARGRTALHWASYFGRE 559
                  G  +       G              +  G          +  +    +    
Sbjct: 68  IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFV 127

Query: 560 ETVIMLVK---LGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
           +   M+     + +  G           G TA +             + + 
Sbjct: 128 DENEMIPLYKLIFSQSGL--QLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 9/72 (12%), Positives = 19/72 (26%), Gaps = 7/72 (9%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRP-------IIATGVSPNFRDARGRTALHWASYFGR 558
              +    + VV       +                +G+    +D  G TAL +     +
Sbjct: 107 ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQK 166

Query: 559 EETVIMLVKLGA 570
              + M+     
Sbjct: 167 PIALKMMEDYIK 178

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 14/117 (11%), Positives = 24/117 (20%), Gaps = 17/117 (14%)

Query: 504 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-----GVSPNFRDARGRTALHWASYFGR 558
           KG    +   +  +            R  I+      G     R   G T        G 
Sbjct: 28  KGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGG 87

Query: 559 E------ETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADL 609
                  E   + ++ GA   A+          +                 +    L
Sbjct: 88  NDITGTTELCKIFLEKGADITALYK------PYKIVVFKNIFNYFVDENEMIPLYKL 138

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 40.8 bits (96), Expect = 7e-04
 Identities = 9/66 (13%), Positives = 18/66 (27%), Gaps = 5/66 (7%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLA 605
               +  A+  G  E  + L + G         +             +      I+ +L 
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNI---LYDVLRNNNDEARYKISMFLI 62

Query: 606 E--ADL 609
              AD+
Sbjct: 63  NKGADI 68

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 57.3 bits (139), Expect = 2e-08
 Identities = 10/51 (19%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 717 EDYLHFAAIKIQQKYRGWKGRKDFLKIRN---HIVKLQAHVRGHQVRKQYK 764
           ++ L       Q   RG+  RK + K+++    +  +Q ++R   V + ++
Sbjct: 775 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 825

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 53.5 bits (130), Expect = 2e-08
 Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 6/106 (5%)

Query: 499 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 558
                     I+      +H AA       +  ++  G   + +D  G   LH A  +G 
Sbjct: 28  CTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGH 87

Query: 559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
            E   +LVK GA     +          T    A+++G   I   L
Sbjct: 88  YEVAELLVKHGAVVNVADL------WKFTPLHEAAAKGKYEICKLL 127

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 52.8 bits (128), Expect = 3e-08
 Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 7/98 (7%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           +  D GG   +H A + G+      ++  G   N  D    T LH A+  G+ E   +L+
Sbjct: 69  HAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLL 128

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           + GA P            G T  DL    G   I   L
Sbjct: 129 QHGADPTKKNR------DGNTPLDLV-KDGDTDIQDLL 159

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 43.5 bits (104), Expect = 5e-05
 Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 5/62 (8%)

Query: 543 DARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAG 602
           ++     L  A+  G  ETV  L  + +      +         T    A+      +  
Sbjct: 5   NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGR-----QSTPLHFAAGYNRVSVVE 59

Query: 603 YL 604
           YL
Sbjct: 60  YL 61

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 54.5 bits (131), Expect = 3e-08
 Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 13/137 (9%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G   N ++  G   +H AA+         ++  G +P+ +D    TA+H A+  G  + V
Sbjct: 96  GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENG 622
            +L+   A+    +        G T   LA        A +L     S       +    
Sbjct: 156 HILLFYKASTNIQDT------EGNTPLHLACDEERVEEAKFLVTQGAS-------IYIEN 202

Query: 623 MDNVAAALAAEKANETA 639
            +       A+      
Sbjct: 203 KEEKTPLQVAKGGLGLI 219

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 6/100 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
              D   +  +H A + G+   +  ++  GV  N +D  G + LH A+  G +E V  L+
Sbjct: 34  TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALL 93

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE 606
             GA   AV         G T    A+S+    IA  L E
Sbjct: 94  VKGAHVNAVNQ------NGCTPLHYAASKNRHEIAVMLLE 127

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 8/102 (7%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 562
           G  P+  D      +H AAA G    +  ++    S N +D  G T LH A    R E  
Sbjct: 129 GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEA 188

Query: 563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             LV  GA+              +T   +A   G  G+    
Sbjct: 189 KFLVTQGASIYIENK------EEKTPLQVAK--GGLGLILKR 222

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N  DD G   +H+AA+ G +  ++ ++  G   N  +  G T LH+A+   R E  +ML+
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL 126

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE 606
           + GA P A +          TA   A+++G+  +   L  
Sbjct: 127 EGGANPDAKDH------YDATAMHRAAAKGNLKMVHILLF 160

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 47.9 bits (114), Expect = 4e-06
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           +LA +   +     I+A        D   RTALHWA   G  E V  L++LG      +D
Sbjct: 12  NLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD 71

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYL 604
                  G +   +A+S G   I   L
Sbjct: 72  ------AGWSPLHIAASAGXDEIVKAL 92

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.4 bits (135), Expect = 3e-08
 Identities = 57/433 (13%), Positives = 114/433 (26%), Gaps = 160/433 (36%)

Query: 139 QHGHQNFYVG--QPSGADFITH------KLTDARLASDSTIANIGTCGERLITDIDVHAV 190
            H H +F  G  Q    D ++          D +   D          + +++  ++  +
Sbjct: 3   HHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMP--------KSILSKEEIDHI 54

Query: 191 TTSSQGASQVLLEHNFNLINNQCQNCPVPEVTVASVSQAGIKPKEELGELKKLDSFGRWM 250
             S    S  L    F  + ++       E  V          ++ + E+ +++ +  ++
Sbjct: 55  IMSKDAVSGTLRL--FWTLLSK------QEEMV----------QKFVEEVLRIN-YK-FL 94

Query: 251 DQEIGGDCDDSLMASDSGNYWNTLDAENDDKE------VSSLSHHMQLEMDSLGPSLSQE 304
              I  +     M +    Y    D   +D +      VS L  +++L          ++
Sbjct: 95  MSPIKTEQRQPSMMTRM--YIEQRDRLYNDNQVFAKYNVSRLQPYLKL----------RQ 142

Query: 305 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRC 364
            L  +R              VLI G+             G   G+  V  +V     ++C
Sbjct: 143 ALLELRP----------AKNVLIDGVL------------GS--GKTWVALDVCLSYKVQC 178

Query: 365 QAPSHAAGRVPFYITGSNRLACSEVRE-------FEYREKPSKAGYPVASKIAPEDEVRL 417
           +       ++ F++   N   C+             Y+  P+       S         +
Sbjct: 179 KMD----FKI-FWLNLKN---CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 418 QTRLAKFLYLDPERK--------W-------FDCTIEDCNKCK-------------LKNT 449
           Q  L + L   P                   F+        CK             L   
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN------LSCKILLTTRFKQVTDFLSAA 284

Query: 450 IYSMRGDSEKDWG----------------RVDE--------SPMAIEGDCPNSRDKLIQN 485
             +                          R  +        +P  +          +I  
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL---------SIIAE 335

Query: 486 LLRNRLCEWLVWK 498
            +R+ L  W  WK
Sbjct: 336 SIRDGLATWDNWK 348

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.9 bits (131), Expect = 1e-07
 Identities = 96/697 (13%), Positives = 190/697 (27%), Gaps = 237/697 (34%)

Query: 288 HHMQLEM----------------------------DSLGPSLSQEQLFSIRDFSPD---- 315
           HHM  E                             D     LS+E++  I   S D    
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIM-SKDAVSG 63

Query: 316 -----WAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNV-IRCQAPSH 369
                W     + +  ++  F+    L  + K+             L   +    + PS 
Sbjct: 64  TLRLFWTLLSKQEE--MVQKFVEE-VLRINYKF-------------LMSPIKTEQRQPS- 106

Query: 370 AAGRVPFYITGSNRLACSEVREFEYREKPSKAGYPVASKIAPEDEVRLQTRLAKFLYLDP 429
                  YI   +RL         Y +    A Y V+     +  ++L+  L +   L P
Sbjct: 107 --MMTRMYIEQRDRL---------YNDNQVFAKYNVSR---LQPYLKLRQALLE---LRP 149

Query: 430 ER-----------KWFDC-TIEDCN----KCKLKNTIYSMRGDSEKDWGRVDESPMAIEG 473
            +           K      ++ C     +CK+   I+         W  +         
Sbjct: 150 AKNVLIDGVLGSGKT--WVALDVCLSYKVQCKMDFKIF---------WLNL--------K 190

Query: 474 DCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKG----PNVIDDGGQGVVHLAAALGYEWAM 529
           +C NS + +++ L   +L   +                 I      +  L  +  YE  +
Sbjct: 191 NC-NSPETVLEML--QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 530 RPIIATGVSPNFRDARGRTALHWASY-FG-------REETVI-MLVKLGAAPGAVEDPTP 580
             ++   V    ++A+      W ++          R + V   L        +++  + 
Sbjct: 248 --LVLLNV----QNAK-----AWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 581 AFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAA 640
                +  + L      +         DL      LT N         ++ AE   +  A
Sbjct: 297 TLTPDEVKSLLLKYLDCR-------PQDLPR--EVLTTNP-----RRLSIIAESIRDGLA 342

Query: 641 QIGVQSDGPAAEQLS--LRGSLAAVRKSAHAAALIQQAFRVRS-FRHRQSI--------- 688
                      ++L+  +  SL  +       A  ++ F   S F     I         
Sbjct: 343 TWD-NWKHVNCDKLTTIIESSLNVLE-----PAEYRKMFDRLSVFPPSAHIPTILLSLIW 396

Query: 689 --QSSDDVSEVSVDLVALGSLNKVSK-------MIHF--------EDYLHFAAI---KIQ 728
                 DV  V   L     + K  K        I+         E  LH + +    I 
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIP 456

Query: 729 QKYRGWKGRKDFLK--IRNHIVKLQAHVRGHQVRK--QYKKVVWSVSIVEKAIL--RWRR 782
           + +        +L     +HI        GH ++     ++    +++     L  R+  
Sbjct: 457 KTFDSDDLIPPYLDQYFYSHI--------GHHLKNIEHPER----MTLFRMVFLDFRFLE 504

Query: 783 RGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQ 842
           +       ++ + +    +     +  + L+  +                +  N     +
Sbjct: 505 Q-------KIRHDSTAWNASGSILNTLQQLKFYKPY--------------ICDN---DPK 540

Query: 843 YMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 879
           Y R+V    +F        L    E+ +     D L 
Sbjct: 541 YERLVNAILDF--------LPKIEENLICSKYTDLLR 569

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 2e-04
 Identities = 57/449 (12%), Positives = 127/449 (28%), Gaps = 114/449 (25%)

Query: 123 WPQIDNSSRNATSVLDQHGHQNFYV-------GQPSGADFITHKLTDARLASDSTIANIG 175
           W  + N +    +VL+    Q            +   +  I  ++   +      + +  
Sbjct: 186 WLNLKNCNS-PETVLEML--QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

Query: 176 TCGERLITDIDVHAVTTSSQGASQVLLEHNFNLINNQCQ------NCPVPEVTVASVSQ- 228
                L+   +V          +       FNL    C+         V +   A+ +  
Sbjct: 243 YENCLLVLL-NV---------QNAKAWNA-FNL---SCKILLTTRFKQVTDFLSAATTTH 288

Query: 229 -AGIKPKEELGELKKLDSFGRWMDQEIGG----DCDDSLMA--------SDSGNYWNTLD 275
            +       L   +      +++D             +            D    W+   
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348

Query: 276 AENDDKEVSSLSHHMQLEMDSLGPSLSQE--QLFSIRDFSPD-----------WAYSGAE 322
             N DK    L+  ++  ++ L P+  ++     S+  F P            W      
Sbjct: 349 HVNCDK----LTTIIESSLNVLEPAEYRKMFDRLSV--FPPSAHIPTILLSLIWFDVIKS 402

Query: 323 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS----HAAGRVPFYI 378
             ++++       K S   K       I +P+  L    ++ +  +    H +  V  Y 
Sbjct: 403 DVMVVVNKL---HKYSLVEKQPKES-TISIPSIYL---ELKVKLENEYALHRS-IVDHY- 453

Query: 379 TGSNRLACSEVREFEYREKPSKAGYPVASKIA-------PEDEVRLQTRLAKFLYLDPER 431
              N        + +    P    Y   S I          + + L       ++LD   
Sbjct: 454 ---NIPKT---FDSDDLIPPYLDQY-FYSHIGHHLKNIEHPERMTLFRM----VFLD--F 500

Query: 432 KWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRL 491
           ++ +       K +  +T ++  G       ++      I  + P   ++L+  +L    
Sbjct: 501 RFLE------QKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP-KYERLVNAILDF-- 551

Query: 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLA 520
               + KI       N+I      ++ +A
Sbjct: 552 ----LPKI-----EENLICSKYTDLLRIA 571

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 54.2 bits (130), Expect = 1e-07
 Identities = 16/100 (16%), Positives = 25/100 (25%), Gaps = 8/100 (8%)

Query: 533 IATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA 592
           + +        A    A   A+  G    +  L +L                   A  LA
Sbjct: 115 LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE----IMAMIQAENYHAFRLA 170

Query: 593 SSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA 632
           +  GH  +   L         +  T      +  A   AA
Sbjct: 171 AENGHLHVLNRL----CELAPTEATAMIQAENYYAFRWAA 206

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 52.3 bits (125), Expect = 4e-07
 Identities = 29/239 (12%), Positives = 58/239 (24%), Gaps = 32/239 (13%)

Query: 496 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD--ARGRTALHWA 553
           +  +    +   VI         LAA  G+   +  +     +       A    A   A
Sbjct: 111 LCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLA 170

Query: 554 SYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSR-GHKGIAGYLAEADLSSH 612
           +  G    +  L +L                   A   A+   GH  +  +L +  +   
Sbjct: 171 AENGHLHVLNRLCELAPTEATAMIQA----ENYYAFRWAAVGRGHHNVINFLLDCPVMLA 226

Query: 613 LSSLTVNENGMDNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHAAAL 672
            + +   E G   V   +A                  A +  +  G    V K       
Sbjct: 227 YAEIHEFEYGEKYVNPFIARHVNRLKEMHD-------AFKLSNPDGVFDLVTK--SECLQ 277

Query: 673 IQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIHFEDY-------LHFAA 724
                           ++ + + +    +  L S+  +  +             L  A 
Sbjct: 278 GFYML------RNLIRRNDEVLLDD---IRFLLSIPGIKALAPTATIPGDANELLRLAL 327

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 45.7 bits (108), Expect = 5e-05
 Identities = 11/100 (11%), Positives = 24/100 (24%), Gaps = 13/100 (13%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLV 566
           N+I    + ++     L       P I                L  A   G +    +L+
Sbjct: 284 NLIRRNDEVLLDDIRFLLSI----PGIKALAPTATIPGDANELLRLALRLGNQGACALLL 339

Query: 567 KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE 606
            + +     +              +  + G   +     E
Sbjct: 340 SIPSVLALTK---------ANNYYINETGGRLDLRAVALE 370

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 54.8 bits (132), Expect = 1e-07
 Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 9/138 (6%)

Query: 717 EDYLHFAAIKIQQKYRGWKGRKDFLKIRNH---IVKLQAHVRGHQVRKQYKKVVWSVSIV 773
           +  +    I  Q + RG+  RK F K +     I  +Q +VR       +      +   
Sbjct: 788 DLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWPW--MXLFFX 845

Query: 774 EKAILRWRRRGSGLRGFRVGNSTANVASENEKTD--EYEFLRIGRKQKFAGVEKALERVK 831
              +L+  R+   ++             +  + +  E E       ++   +++ L+   
Sbjct: 846 IXPLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAET 905

Query: 832 SMVRNPEARDQYMRMVAK 849
            +    EA +  +R+ AK
Sbjct: 906 ELYA--EAEEMRVRLAAK 921

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 52.1 bits (125), Expect = 3e-07
 Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 8/77 (10%)

Query: 536 GVSPNFRDARGRTALHWASYFGREETVIMLVKLGA--------APGAVEDPTPAFPGGQT 587
             S      +G+TALH A        V +LV+ GA                 P F  G+ 
Sbjct: 91  NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGEL 150

Query: 588 AADLASSRGHKGIAGYL 604
              LA+      I  +L
Sbjct: 151 PLSLAACTNQLAIVKFL 167

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 50.6 bits (121), Expect = 8e-07
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 29/109 (26%)

Query: 506 PNVIDDGGQGVVHLAAALG--------YEWAMRP--------IIATGVSPNFRDARGRTA 549
            +  D  G  V+H    +         +  +M          +  T       + +G T 
Sbjct: 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTP 236

Query: 550 LHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHK 598
           L  A+  G+   +  +++                        A+   H 
Sbjct: 237 LALAASSGKIGVLAYILQREI-------------HEPECRHAAAHHHHH 272

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 49.0 bits (117), Expect = 3e-06
 Identities = 19/159 (11%), Positives = 36/159 (22%), Gaps = 23/159 (14%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD--------------ARGRT 548
                     GQ  +H+A        +  ++  G                       G  
Sbjct: 91  NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGEL 150

Query: 549 ALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 608
            L  A+   +   V  L++    P    D +     G T            +        
Sbjct: 151 PLSLAACTNQLAIVKFLLQNSWQPA---DISARDSVGNTVLHALVEVADNTVDNTKFVTS 207

Query: 609 LSSHLSSLTVNENGMDNVAAALAAEKANET----AAQIG 643
           + + +  L +       +       +   T    AA  G
Sbjct: 208 MYNEI--LILGAKLHPTLKLEEITNRKGLTPLALAASSG 244

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 16/118 (13%)

Query: 503 GKGPNVIDDGGQGVVHLAAALGYEWAMRPI-------IATGVSPNFRD-ARGRTALHWAS 554
             G        +  +  A A      +  +               F+D   G+T L  A 
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM 62

Query: 555 ---YFGREETVIMLVKLGAAPGAVE-----DPTPAFPGGQTAADLASSRGHKGIAGYL 604
              + G+ +T+ +L+ +     +++       T ++  GQTA  +A  R +  +   L
Sbjct: 63  LNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLL 120

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 17/106 (16%)

Query: 518 HLAAALGYEWAMRPIIATGVSP---NFRDARGRTALHWASYFGREETVI---------ML 565
            LAA       ++ ++     P   + RD+ G T LH                      +
Sbjct: 153 SLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEI 212

Query: 566 VKLGA---APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 608
           + LGA       +E+ T     G T   LA+S G  G+  Y+ + +
Sbjct: 213 LILGAKLHPTLKLEEITNRK--GLTPLALAASSGKIGVLAYILQRE 256

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 53.5 bits (129), Expect = 3e-07
 Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 14/147 (9%)

Query: 717 EDYLHFAAI--KIQQKYRGWKGRKDFLKIRNH---IVKLQAHVRGHQVRKQYKKVVWSVS 771
                 +    +  +  +    ++  L+ R+    I  +Q+ +  H+  K+ +K      
Sbjct: 755 ASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQE 814

Query: 772 IVE-KAILR-WRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIG-RKQKFAGVEKALE 828
           + E +AI    + +       R+      VA      +E +       K +    E    
Sbjct: 815 VSELEAIYNSLQTK------LRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRI 868

Query: 829 RVKSMVRNPEARDQYMRMVAKFENFKM 855
            +K   +      +Y R++ K EN+  
Sbjct: 869 ELKRQKKIAVLLQKYNRILKKLENWAT 895

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 52.5 bits (125), Expect = 3e-07
 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 8/118 (6%)

Query: 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
                  +  A A     A   ++  G + N  D+ GR  LH A+  G      + +K G
Sbjct: 232 GQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG 291

Query: 570 AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA 627
           A  GA +        G+    +A    +  I   L  A +    ++    + G +   
Sbjct: 292 ADLGARD------SEGRDPLTIAMETANADIVTLLRLAKMREAEAAQ--GQAGDETYL 341

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 52.0 bits (124), Expect = 4e-07
 Identities = 17/106 (16%), Positives = 30/106 (28%), Gaps = 10/106 (9%)

Query: 491 LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSP----NFRDARG 546
             + L+  I +    P       +           + ++   +          N +D+ G
Sbjct: 224 YLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNG 283

Query: 547 RTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA 592
            T L+ A+  G    V  L+  GA P            G    D  
Sbjct: 284 DTCLNIAARLGNISIVDALLDYGADPFIANK------SGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 11/183 (6%)

Query: 463 RVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAA 522
           +   SP+  + +     +  +Q LL   + E      ++     +      Q   H++  
Sbjct: 47  KALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFD 106

Query: 523 LGYEWAMRPIIATGVSPNF-RDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPA 581
              +        T ++ N   D  G T LHW +     E V  LVK G+     ++    
Sbjct: 107 SLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDN---- 162

Query: 582 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSL-TVNENGMD--NVAAALAAEKANET 638
              G++    A    +   +G      L      L   +       +     +       
Sbjct: 163 --MGESCLVKAVKSVNNYDSGTFEAL-LDYLYPCLILEDSMNRTILHHIIITSGMTGCSA 219

Query: 639 AAQ 641
           AA+
Sbjct: 220 AAK 222

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 52.0 bits (125), Expect = 9e-07
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 12/147 (8%)

Query: 717 EDYLHFAAIKIQQKYRGWKGRKDF---------LKIRNHIVKLQAHVRGHQVRKQYKKVV 767
           E  L     K     R  +  +               + I  +Q+ +  H+  K+ +K  
Sbjct: 759 EQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPP 818

Query: 768 WSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAGVEKAL 827
               + E   +    +       R         + NE    +  L    ++    +   L
Sbjct: 819 KGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIEL 878

Query: 828 ERVKSMVRNPEARDQYMRMVAKFENFK 854
           +R K +        +Y R++ K EN+ 
Sbjct: 879 KRQKKIA---VLLQKYNRILKKLENWA 902

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 50.2 bits (120), Expect = 9e-07
 Identities = 23/96 (23%), Positives = 32/96 (33%), Gaps = 11/96 (11%)

Query: 517 VHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGA------ 570
           + L  A         I +          RG+TALH A     +  V +LV+ GA      
Sbjct: 67  ILLDIAEKTGNMREFINS---PFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQA 123

Query: 571 --APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
                  +D    F  G+    LA+      I  YL
Sbjct: 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 19/100 (19%), Positives = 30/100 (30%), Gaps = 13/100 (13%)

Query: 518 HLAAALGYEWAMRPIIATGVS---PNFRDARGRTALHWASYFG--REETVIMLVKLGA-- 570
            LAA       +  +   G        +D+RG T LH          E    + K+    
Sbjct: 145 SLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLL 204

Query: 571 -APGAVEDPTPAFPG-----GQTAADLASSRGHKGIAGYL 604
               A   P           G +   +A+  G  GI  ++
Sbjct: 205 LIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHI 244

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 49.9 bits (119), Expect = 3e-06
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 11/100 (11%)

Query: 513 GQGVVHLAAALGYEWAMRPI----IATGVSPNFRDARGRTALHWASYFGREETVIMLVKL 568
            + V+HLA  +  + ++ P+    I  G   + + A G TALH+A+ + + + + +L+K 
Sbjct: 171 EELVLHLAVKVANQASL-PLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG 229

Query: 569 GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 608
            A  G V         G+TA D+A  + HK     L +A 
Sbjct: 230 RALVGTVN------EAGETALDIARKKHHKECEELLEQAQ 263

>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A Length = 402

 Score = 49.1 bits (116), Expect = 4e-06
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAP 367
            I+  SP   ++     V+IIG                +FG + V +E++T + IR Q P
Sbjct: 233 CIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVIFGTMLVWSELITPHAIRVQTP 285

Query: 368 -SHAAGRVPFYITGSNRLACS 387
             H  G V   ++  ++  C 
Sbjct: 286 PRHIPGVVEVTLSYKSKQFCK 306

>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A Length = 727

 Score = 47.7 bits (112), Expect = 2e-05
 Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 12/95 (12%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAP 367
            I   SP +      T + + G +L +    +        G      + ++++++ C  P
Sbjct: 637 VITSISPKYGPMAGGTLLTLTGNYLNS---GNSRH--ISIGGKTCTLKSVSNSILECYTP 691

Query: 368 SHAAG---RVPFYITGSNRLACSEVREFEYREKPS 399
           +        V   I  +NR        F YRE   
Sbjct: 692 AQTISTEFAVKLKIDLANRETSI----FSYREDLH 722

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 23/135 (17%), Positives = 37/135 (27%), Gaps = 21/135 (15%)

Query: 491 LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY--------------EWAMRPIIATG 536
           L E+L W               G+  +  A                   + +  P     
Sbjct: 21  LLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80

Query: 537 VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGA-------VEDPTPAFPGGQTAA 589
                   +G +ALH A      + V +LV+ GA            +     F  G+   
Sbjct: 81  AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPL 140

Query: 590 DLASSRGHKGIAGYL 604
            LA+      +  YL
Sbjct: 141 SLAACTKQWDVVTYL 155

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 45.2 bits (107), Expect = 4e-05
 Identities = 9/66 (13%), Positives = 21/66 (31%)

Query: 510 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
           +      + +    G       +  T       + +G T L  A+  G+ E    +++  
Sbjct: 185 NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244

Query: 570 AAPGAV 575
            +  A 
Sbjct: 245 FSGAAA 250

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 44.8 bits (106), Expect = 6e-05
 Identities = 16/127 (12%), Positives = 33/127 (25%), Gaps = 26/127 (20%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA-------------RGRTALHWA 553
                 G   +H+A        ++ ++  G   + R                G   L  A
Sbjct: 84  TDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLA 143

Query: 554 SYFGREETVIMLVKLGAAPGAVEDP-----TP--------AFPGGQTAADLASSRGHKGI 600
           +   + + V  L++    P ++E       T               +A  +    G   +
Sbjct: 144 ACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM 203

Query: 601 AGYLAEA 607
              L   
Sbjct: 204 GARLCPT 210

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 44.4 bits (105), Expect = 7e-05
 Identities = 15/99 (15%), Positives = 24/99 (24%), Gaps = 23/99 (23%)

Query: 506 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIML 565
               D  G  V+H    +                   ++   +AL    Y G  +    L
Sbjct: 165 LEATDSLGNTVLHALVMIA-----------------DNSPENSALVIHMYDGLLQMGARL 207

Query: 566 VKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
                              G T   LA+  G   I  ++
Sbjct: 208 CPTVQLEEISNH------QGLTPLKLAAKEGKIEIFRHI 240

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	885
d2cxka1	82	b.1.18.1 (A:872-953) Calmodulin binding transcript	5e-12
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-11
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-10
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-07
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	9e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	0.001
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-09
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-09
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-08
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	9e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-09
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	7e-09
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-08
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-08
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	0.002
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	5e-08
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	5e-08
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	0.004
d1cxla1	87	b.1.18.2 (A:497-583) Cyclomaltodextrin glycanotran	9e-07
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-06
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	5e-06
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	0.001
d3bmva1	83	b.1.18.2 (A:496-578) Cyclomaltodextrin glycanotran	3e-06
d1qhoa1	81	b.1.18.2 (A:496-576) Five domain "maltogenic" alph	3e-06
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	4e-06
d1uadc_	92	b.1.18.18 (C:) Exocyst complex component Sec5, Ral	4e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	7e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	0.002
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-05
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	4e-05
d1cyga1	83	b.1.18.2 (A:492-574) Cyclomaltodextrin glycanotran	4e-05
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.001
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.001
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	0.001
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	0.002

>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 82

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: Calmodulin binding transcription activator 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 5e-12
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 309 IRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS 368
           + D+SP+W+Y     KVLI G +       +   + C+F +I VPA ++   V+RC  P+
Sbjct: 2   VTDYSPEWSYPEGGVKVLITGPWQ-----EASNNYSCLFDQISVPASLIQPGVLRCYCPA 56

Query: 369 HAAGRVPFYITGSNRLACSEVREFEYR 395
           H  G V   +  +N++  + V  FEY+
Sbjct: 57  HDTGLVTLQVAFNNQIISNSV-VFEYK 82

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (157), Expect = 1e-11
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 518 HLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED 577
           H+A+ +G+   ++ ++  G SPN  + +  T LH A+  G  E    L++  A   A   
Sbjct: 5   HVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAK 64

Query: 578 PTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
                   QT    A+  GH  +   L E 
Sbjct: 65  ------DDQTPLHCAARIGHTNMVKLLLEN 88

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (145), Expect = 4e-10
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 11/150 (7%)

Query: 475 CPNSRDKLIQNLLRNRLCEWL--VWKI-HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRP 531
             N  +K     L     E    V  +  + G   +     G   +H+A+  G    ++ 
Sbjct: 256 NGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKF 315

Query: 532 IIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADL 591
           ++      N +   G + LH A+  G  + V +L+K GA+P  V         G T   +
Sbjct: 316 LLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS------DGTTPLAI 369

Query: 592 ASSRGHKGIAGYLAEADLSSHLSSLTVNEN 621
           A   G+  +   L    ++   S + V++ 
Sbjct: 370 AKRLGYISVTDVLKV--VTDETSFVLVSDK 397

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (123), Expect = 2e-07
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 491 LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTAL 550
           + + L+    + G  PNV +   +  +H+AA  G+    + ++      N +    +T L
Sbjct: 15  IVKNLL----QRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL 70

Query: 551 HWASYFGREETVIMLVKLGAAP 572
           H A+  G    V +L++  A P
Sbjct: 71  HCAARIGHTNMVKLLLENNANP 92

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 5e-06
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 9/164 (5%)

Query: 441 CNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLR---NRLCEWLVW 497
            N        ++    + ++        +  +        K     L          +  
Sbjct: 90  ANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 149

Query: 498 KIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 557
            + E    PN     G   +H+A        ++ ++  G SP+     G T LH A+   
Sbjct: 150 LLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQN 209

Query: 558 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIA 601
           + E    L++ G +  A          G T   LA+  GH  + 
Sbjct: 210 QVEVARSLLQYGGSANAESVQ------GVTPLHLAAQEGHAEMV 247

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 9e-06
 Identities = 36/202 (17%), Positives = 61/202 (30%), Gaps = 40/202 (19%)

Query: 473 GDCPNSRDKLIQNLLRNRLCEWLV---WKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAM 529
           G  P+S        L     +  V     + + G   N     G   +HLAA  G+   +
Sbjct: 188 GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV 247

Query: 530 RPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDP--TPAFPG--- 584
             +++   + N  +  G T LH  +  G      +L+K G    A      TP       
Sbjct: 248 ALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHY 307

Query: 585 ----------------------GQTAADLASSRGHKGIAGYLAE--ADLSSHLSSLTVNE 620
                                 G +    A+ +GH  I   L +  A  +       V+ 
Sbjct: 308 GNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE------VSS 361

Query: 621 NGMDNVAAALAAEKANETAAQI 642
           +G      A+A      +   +
Sbjct: 362 DG--TTPLAIAKRLGYISVTDV 381

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 1e-05
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 548 TALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
           T LH AS+ G    V  L++ GA+P             +T   +A+  GH  +A YL + 
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNV------KVETPLHMAARAGHTEVAKYLLQN 55

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 6/113 (5%)

Query: 495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS 554
           +V  +   G  P+     G   +H+AA        R ++  G S N    +G T LH A+
Sbjct: 180 IVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA 239

Query: 555 YFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
             G  E V +L+   A              G T   L +  GH  +A  L + 
Sbjct: 240 QEGHAEMVALLLSKQANGNLGNK------SGLTPLHLVAQEGHVPVADVLIKH 286

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 12/177 (6%)

Query: 432 KWFDCTIEDCNKCKLKNTIYSMRGDSEKDWG--RVDESPMAIEGDCPNSRDKLIQNLLRN 489
             +    E            +  GD+  D       E  +  E +      +  +     
Sbjct: 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEER 175

Query: 490 RLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTA 549
            +       ++ G          G   +H+AAA GY   ++ +I      N +D  G T 
Sbjct: 176 IMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTP 235

Query: 550 LHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE 606
           LH A+++G+EE   +LV+      AV         GQTA D+A     + I GYL E
Sbjct: 236 LHAAAHWGKEEACRILVENLCDMEAVNK------VGQTAFDVAD----EDILGYLEE 282

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 16/112 (14%)

Query: 525 YEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPG 584
              A + + +  ++       G TALH A+  G  E + +L++         D       
Sbjct: 178 LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY------DVNIKDYD 231

Query: 585 GQTAADLASSRGHKGIAGYLAE--ADLSSHLSSLTVNENGMDNVAAALAAEK 634
           G T    A+  G +     L E   D+        VN+ G    A  +A E 
Sbjct: 232 GWTPLHAAAHWGKEEACRILVENLCDME------AVNKVG--QTAFDVADED 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 56.7 bits (135), Expect = 3e-09
 Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 6/114 (5%)

Query: 491 LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTAL 550
           + +          +  +    G   + + A           +   G + + +D  G+T +
Sbjct: 166 VEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 225

Query: 551 HWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
             A+  GR E V+ L++ GA+  AV+          TA  LA +  H  I    
Sbjct: 226 MLAAQEGRIEVVMYLIQQGASVEAVDA------TDHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 53.6 bits (127), Expect = 3e-08
 Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 1/155 (0%)

Query: 414 EVRLQTRLAKFLYLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEG 473
            + +    +  L  D E    +           +            + G   +   A   
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 474 DCPNSRDK-LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPI 532
           D    + +  +    +      + + + E G   +  D+ G+  + LAA  G    +  +
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240

Query: 533 IATGVSPNFRDARGRTALHWASYFGREETVIMLVK 567
           I  G S    DA   TA   A        V +  +
Sbjct: 241 IQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.2 bits (100), Expect = 9e-05
 Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 4/59 (6%)

Query: 514 QGVVHLA-AALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGREETVIMLVKLGA 570
           +  + L   A G      PI    V  N  D R  RT LHW +     E    L+   A
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESV--NIIDPRHNRTVLHWIASNSSAEKSEDLIVHEA 57

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.2 bits (134), Expect = 5e-09
 Identities = 17/121 (14%), Positives = 33/121 (27%), Gaps = 9/121 (7%)

Query: 475 CPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPII- 533
              S         +  L   + W + +  +      +  +   +       +  +  +  
Sbjct: 185 IITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDL 244

Query: 534 --ATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADL 591
                   N +D+ G T L+ A+  G    V  L+  GA P            G    D 
Sbjct: 245 KWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK------SGLRPVDF 298

Query: 592 A 592
            
Sbjct: 299 G 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 467 SPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYE 526
           SP+  + +     +  +Q LL   + E      ++     +      Q   H++     +
Sbjct: 27  SPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQ 86

Query: 527 WAMRPIIATGVSPNFR-DARGRTALHWASYFGREETVIMLVKLGAAP 572
                   T ++ N   D  G T LHW +     E V  LVK G+  
Sbjct: 87  EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR 133

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 15/113 (13%), Positives = 30/113 (26%)

Query: 441 CNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKIH 500
            +     +       D    W    ++     G          +N  R       +    
Sbjct: 187 TSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW 246

Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWA 553
                 N  D  G   +++AA LG    +  ++  G  P   +  G   + + 
Sbjct: 247 IIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 22/175 (12%), Positives = 51/175 (29%), Gaps = 9/175 (5%)

Query: 476 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNV-----IDDGGQGVVHLAAALGYEWAMR 530
            NS         ++   + L+ ++++      +     +D+ G   +H   ++     ++
Sbjct: 65  RNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVK 124

Query: 531 PIIATGVSPNFRDARGRTALHWASYF---GREETVIMLVKLGAAPGAVEDPTPAFPGGQT 587
            ++  G +  + D  G + L  A          T   L+        +ED          
Sbjct: 125 HLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI-LHH 183

Query: 588 AADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQI 642
               +   G    A Y  +  +   +           N   +   +K  E    I
Sbjct: 184 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSI 238

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 7e-09
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 1/88 (1%)

Query: 488 RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY-EWAMRPIIATGVSPNFRDARG 546
            +   E +   + + G   NV  + G+  + LA    +     R +    +  N  D+ G
Sbjct: 194 DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDG 253

Query: 547 RTALHWASYFGREETVIMLVKLGAAPGA 574
           +TAL  A     ++   +L K GA+   
Sbjct: 254 KTALLLAVELKLKKIAELLCKRGASTDC 281

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (130), Expect = 2e-08
 Identities = 32/181 (17%), Positives = 54/181 (29%), Gaps = 19/181 (10%)

Query: 433 WFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRL- 491
            F           LK         + +   + D+  +   G        L+    +  + 
Sbjct: 108 AFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA-----LMDAAEKGHVE 162

Query: 492 -CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWA----MRPIIATGVSPNFRDARG 546
             + L   + E G   N  D+ G+  +  A     +         ++  G   N R  RG
Sbjct: 163 VLKIL---LDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERG 219

Query: 547 RTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE 606
           +T L  A        V  L++         +       G+TA  LA     K IA  L +
Sbjct: 220 KTPLILAVEKKHLGLVQRLLEQEHI-----EINDTDSDGKTALLLAVELKLKKIAELLCK 274

Query: 607 A 607
            
Sbjct: 275 R 275

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 52.5 bits (124), Expect = 4e-08
 Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 6/175 (3%)

Query: 430 ERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRN 489
           +R        +      +  +++          ++     A   +           L   
Sbjct: 40  KRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAAR 99

Query: 490 RLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTA 549
              E +V  +       N  D+ G+  +H AAA+    A+  ++    + + +D +  T 
Sbjct: 100 LAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETP 159

Query: 550 LHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 604
           L  A+  G  E    L+   A     +         +   D+AS R H  I   L
Sbjct: 160 LFLAAREGSYEASKALLDNFANREITDH------MDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 38.2 bits (87), Expect = 0.002
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 533 IATGVSPNFR-DARGRTALHWASYFGREETVIML 565
           +A G   N   D  G T+LH A+ F R +    L
Sbjct: 9   LAQGAELNATMDKTGETSLHLAARFARADAAKRL 42

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 54.3 bits (130), Expect = 5e-08
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 717 EDYLHFAAIKIQQKYRGWKGRKDFLKI---RNHIVKLQAHVRGHQVRKQYKK 765
           +D L       Q + RG+  R ++  +   R  I  +Q +VR     K +  
Sbjct: 731 DDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPW 782

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 54.3 bits (130), Expect = 5e-08
 Identities = 10/52 (19%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 717 EDYLHFAAIKIQQKYRGWKGRKDFLKIRNH---IVKLQAHVRGHQVRKQYKK 765
           ++ L       Q   RG+  RK + K+++    +  +Q ++R   V + ++ 
Sbjct: 727 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQW 778

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 742 KIRNHIVKLQAHVRGHQVRKQYKKV---VWSVSIVEKAILRWRRR 783
           ++   I   QAH+RG+ +RK YKK+      +S++++ I +W   
Sbjct: 729 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL 773

>d1cxla1 b.1.18.2 (A:497-583) Cyclomaltodextrin glycanotransferase, domain D {Bacillus circulans, different strains [TaxId: 1397]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Cyclomaltodextrin glycanotransferase, domain D
species: Bacillus circulans, different strains [TaxId: 1397]

 Score = 45.4 bits (107), Expect = 9e-07
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 11/90 (12%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEV-PAEVL--TDNVIRC 364
           +I    P  A  G    + I G   G+ K +        FG   V  A++    D  I+ 
Sbjct: 4   TIGHVGPMMAKPG--VTITIDGRGFGSSKGT------VYFGTTAVSGADITSWEDTQIKV 55

Query: 365 QAPSHAAGRVPFYITGSNRLACSEVREFEY 394
           + P+ A G     +  +   A +    FE 
Sbjct: 56  KIPAVAGGNYNIKVANAAGTASNVYDNFEV 85

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 49.5 bits (117), Expect = 1e-06
 Identities = 20/137 (14%), Positives = 36/137 (26%), Gaps = 5/137 (3%)

Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR--GRTALHWASYFGR 558
              +   VI         LAA  G+   +  +     +      +     A   A+  G 
Sbjct: 114 TSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGH 173

Query: 559 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTV 618
              +  L +L                       A  RGH  +  +L +  +    + +  
Sbjct: 174 LHVLNRLCELAPTE---ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHE 230

Query: 619 NENGMDNVAAALAAEKA 635
            E G   V   +A    
Sbjct: 231 FEYGEKYVNPFIARHVN 247

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 47.2 bits (111), Expect = 5e-06
 Identities = 17/110 (15%), Positives = 31/110 (28%), Gaps = 7/110 (6%)

Query: 501 EGGKGPNVIDDGGQGVVHLAAALGYEWA---MRPIIATGVSPNFRDARGRTALHWASYFG 557
           +     +      + +  +AA  G   A   +  ++ +        A    A   A+  G
Sbjct: 78  QLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 137

Query: 558 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 607
               +  L +L                   A  LA+  GH  +   L E 
Sbjct: 138 HLHVLNRLCELAPTE----IMAMIQAENYHAFRLAAENGHLHVLNRLCEL 183

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 42.2 bits (98), Expect = 2e-04
 Identities = 11/89 (12%), Positives = 20/89 (22%), Gaps = 7/89 (7%)

Query: 516 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV 575
              L+   G             S   +       L   +     + +  L+ +       
Sbjct: 255 AFKLSNPDGV------FDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALA 308

Query: 576 EDPTPAFPGGQTAADLASSRGHKGIAGYL 604
              T           LA   G++G    L
Sbjct: 309 PTATIP-GDANELLRLALRLGNQGACALL 336

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (113), Expect = 1e-06
 Identities = 17/80 (21%), Positives = 24/80 (30%)

Query: 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALH 551
            E +      G          G+  +HLA        +  ++  G  P  R   GRT L 
Sbjct: 171 AEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLG 230

Query: 552 WASYFGREETVIMLVKLGAA 571
            A          +L   GA 
Sbjct: 231 SALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.0 bits (110), Expect = 4e-06
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 540 NFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGH 597
            +    G TALH A     E  +  L+   A    ++        GQTA  LA+  G 
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL---GQTALHLAAILGE 57

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.3 bits (103), Expect = 3e-05
 Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 14/160 (8%)

Query: 507 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR---GRTALHWASYFGREETVI 563
             + + G   +HLA    +E  +  ++       + D +   G+TALH A+  G   TV 
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVE 62

Query: 564 MLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGM 623
            L        A      A  GG TA  LA        A  L +        S   + +  
Sbjct: 63  KLYA------AGAGVLVAERGGHTALHLACRVRAHTCACVLLQ-----PRPSHPRDASDT 111

Query: 624 DNVAAALAAEKANETAAQIGVQSDGPAAEQLSLRGSLAAV 663
               +       +   A +  Q +    E+         +
Sbjct: 112 YLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL 151

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 26/131 (19%), Positives = 35/131 (26%), Gaps = 6/131 (4%)

Query: 477 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG 536
            S      +   N   E          +      DG   +         E       A  
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182

Query: 537 VSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRG 596
                    GRT LH A        + +L+K GA P A         GG+T    A  R 
Sbjct: 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY------GGRTPLGSALLRP 236

Query: 597 HKGIAGYLAEA 607
           +  +A  L   
Sbjct: 237 NPILARLLRAH 247

>d3bmva1 b.1.18.2 (A:496-578) Cyclomaltodextrin glycanotransferase, domain D {Thermoanaerobacterium [TaxId: 28895]} Length = 83

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Cyclomaltodextrin glycanotransferase, domain D
species: Thermoanaerobacterium [TaxId: 28895]

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 14/86 (16%), Positives = 24/86 (27%), Gaps = 8/86 (9%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAP 367
            I    P    +G    + I G   GT           +FG          D  ++ + P
Sbjct: 5   LIGHVGPTMTKAG--QTITIDGRGFGTTSGQ------VLFGSTAGTIVSWDDTEVKVKVP 56

Query: 368 SHAAGRVPFYITGSNRLACSEVREFE 393
           S   G+    +  S+    +      
Sbjct: 57  SVTPGKYNISLKTSSGATSNTYNNIN 82

>d1qhoa1 b.1.18.2 (A:496-576) Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D {Bacillus stearothermophilus [TaxId: 1422]} Length = 81

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 8/75 (10%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAP 367
            I   +P+    G    V I G   GT + +        FG +    +  T N I    P
Sbjct: 5   QIGSVAPNMGIPG--NVVTIDGKGFGTTQGT------VTFGGVTATVKSWTSNRIEVYVP 56

Query: 368 SHAAGRVPFYITGSN 382
           + AAG     +T   
Sbjct: 57  NMAAGLTDVKVTAGG 71

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.6 bits (106), Expect = 4e-06
 Identities = 16/126 (12%), Positives = 37/126 (29%)

Query: 440 DCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKI 499
                 L  +   +                 +  D     D+   ++  +     +V  +
Sbjct: 27  PFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVL 86

Query: 500 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRE 559
            + G   N  D      +H A    ++  +  +I  G   + +    +TA   +   G E
Sbjct: 87  LKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE 146

Query: 560 ETVIML 565
           +   +L
Sbjct: 147 DLAEIL 152

>d1uadc_ b.1.18.18 (C:) Exocyst complex component Sec5, Ral-binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Other IPT/TIG domains
domain: Exocyst complex component Sec5, Ral-binding domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.9 bits (103), Expect = 4e-06
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAP 367
            +   SP+       TKV I G  LGT   +             + AE ++ + I C+  
Sbjct: 6   LVTGISPNEGIPW--TKVTIRGENLGTGP-TDLIGLTICGHNCLLTAEWMSASKIVCRVG 62

Query: 368 SHAAGRVPFYITGSNRLACSEVREFEYRE 396
                +    +T  +    +    F+  +
Sbjct: 63  QAKNDKGDIIVTTKSGGRGTSTVSFKLLK 91

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (108), Expect = 5e-06
 Identities = 27/172 (15%), Positives = 44/172 (25%), Gaps = 10/172 (5%)

Query: 433 WFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLC 492
                         +   +           R      A       +R+      L   + 
Sbjct: 60  VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 119

Query: 493 EWLVWK----IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT 548
                     +  G     V    G+  +  A        ++ ++  G + N +   G +
Sbjct: 120 TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSS 179

Query: 549 ALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGI 600
           ALH AS  G    V  LV+ GA                T   +A SR    I
Sbjct: 180 ALHSASGRGLLPLVRTLVRSGADSSLKNC------HNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (107), Expect = 7e-06
 Identities = 13/137 (9%), Positives = 36/137 (26%)

Query: 426 YLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQN 485
               +         +         ++       ++  ++     A          +    
Sbjct: 90  RALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLI 149

Query: 486 LLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR 545
                    +V  + + G   N     G   +H A+  G    +R ++ +G   + ++  
Sbjct: 150 HAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCH 209

Query: 546 GRTALHWASYFGREETV 562
             T L  A      + +
Sbjct: 210 NDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (87), Expect = 0.002
 Identities = 15/52 (28%), Positives = 16/52 (30%), Gaps = 2/52 (3%)

Query: 546 GRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGH 597
           G T LH A   G    V  LV L    G   +        QT   LA     
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGR--ELDIYNNLRQTPLHLAVITTL 52

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (107), Expect = 7e-06
 Identities = 13/138 (9%), Positives = 28/138 (20%)

Query: 433 WFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLC 492
                        L      +                +I      +    +     +   
Sbjct: 65  PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL 124

Query: 493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHW 552
             +   +  G          G+  +HLA  L     +  ++  G   N    +G +    
Sbjct: 125 GIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 184

Query: 553 ASYFGREETVIMLVKLGA 570
                       L +L  
Sbjct: 185 TWGRPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (94), Expect = 2e-04
 Identities = 18/83 (21%), Positives = 24/83 (28%), Gaps = 6/83 (7%)

Query: 525 YEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPG 584
                  +             GRTALH A      + V +L+K GA      D       
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA------DVNRVTYQ 177

Query: 585 GQTAADLASSRGHKGIAGYLAEA 607
           G +   L   R    I   L + 
Sbjct: 178 GYSPYQLTWGRPSTRIQQQLGQL 200

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 2e-05
 Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 40/148 (27%)

Query: 492 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALH 551
            + +V  +   G   N ++  G   +H AA+         ++  G +P+ +D    TA+H
Sbjct: 82  RDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMH 141

Query: 552 ---------------------------------WASYFGREETVIMLVKLGAAPGAVEDP 578
                                             A    R E   +LV  GA+       
Sbjct: 142 RAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENK- 200

Query: 579 TPAFPGGQTAADLASSRGHKGIAGYLAE 606
                  +T   +A   G   I   + E
Sbjct: 201 -----EEKTPLQVA-KGGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 2e-04
 Identities = 16/98 (16%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 473 GDCPNSRDKLIQNLL---RNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAM 529
           G  P+++D      +     +    ++  +       N+ D  G   +HLA         
Sbjct: 126 GANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEA 185

Query: 530 RPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVK 567
           + +++ G S    +   +T L  A   G    +  +V+
Sbjct: 186 KLLVSQGASIYIENKEEKTPLQVAKG-GLGLILKRMVE 222

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (98), Expect = 4e-05
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 1/127 (0%)

Query: 440 DCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQNLLRNRLCEWLVWKI 499
             +                     ++        +  ++      +          +  +
Sbjct: 28  HPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVL 87

Query: 500 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRE 559
            E G   NV D  G   +HLA   G+   +  + A     + RDARG T L  A   G +
Sbjct: 88  VEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES-DLHRRDARGLTPLELALQRGAQ 146

Query: 560 ETVIMLV 566
           + V +L 
Sbjct: 147 DLVDILQ 153

>d1cyga1 b.1.18.2 (A:492-574) Cyclomaltodextrin glycanotransferase, domain D {Bacillus stearothermophilus [TaxId: 1422]} Length = 83

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Cyclomaltodextrin glycanotransferase, domain D
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 40.4 bits (94), Expect = 4e-05
 Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 8/86 (9%)

Query: 308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAP 367
            I    P     G   +V I G   GT   +        FG         ++N I    P
Sbjct: 5   IIGHVGPMMGQVG--HQVTIDGEGFGTNTGT------VKFGTTAANVVSWSNNQIVVAVP 56

Query: 368 SHAAGRVPFYITGSNRLACSEVREFE 393
           + + G+    +  S+    +    FE
Sbjct: 57  NVSPGKYNITVQSSSGQTSAAYDNFE 82

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.4 bits (90), Expect = 0.001
 Identities = 17/145 (11%), Positives = 35/145 (24%), Gaps = 4/145 (2%)

Query: 426 YLDPERKWFDCTIEDCNKCKLKNTIYSMRGDSEKDWGRVDESPMAIEGDCPNSRDKLIQN 485
               +R       +  N+      +   +   E     ++        D  N +  L + 
Sbjct: 87  KSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFN-QIPLHRA 145

Query: 486 LLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR 545
                L    +               G   + H  A    + A+  +   G   +  D +
Sbjct: 146 ASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNK 205

Query: 546 GRTALHWASYFGREETVIMLVKLGA 570
           G  A   A     E+     +    
Sbjct: 206 GAKAEDVAL---NEQVKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.0 bits (89), Expect = 0.001
 Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 518 HLAAALGYEWAMRP-IIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
           H A      + ++  + +       +D  GR  LHW+  F   E    L+   
Sbjct: 5   HQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.4 bits (88), Expect = 0.001
 Identities = 10/76 (13%), Positives = 23/76 (30%)

Query: 495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS 554
           +V  + +     +     G   +H          ++ ++    S    +  G T L  A 
Sbjct: 63  IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122

Query: 555 YFGREETVIMLVKLGA 570
               E    +L +  +
Sbjct: 123 RLKHEHCEELLTQALS 138

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (85), Expect = 0.002
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 525 YEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG 569
                  +  T  +   R+ +G TA   A  +GR E V ++   G
Sbjct: 112 LRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	885
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.83
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.82
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.81
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.79
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.79
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.78
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.76
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.76
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.76
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.74
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.74
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.73
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.73
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.73
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.72
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.72
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.71
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.7
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.7
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.7
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.69
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.69
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.69
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.67
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.67
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.67
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.67
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.65
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.65
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.64
d2cxka1	82	Calmodulin binding transcription activator 1 {Huma	99.63
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.62
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.62
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.62
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.56
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.55
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.51
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	99.27
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	99.23
d1qhoa1	81	Five domain "maltogenic" alpha-amylase (glucan 1,4	98.73
d1p7hl1	103	T-cell transcription factor NFAT1 (NFATC2) {Human	98.62
d1uadc_	92	Exocyst complex component Sec5, Ral-binding domain	98.55
d1cxla1	87	Cyclomaltodextrin glycanotransferase, domain D {Ba	98.51
d3bmva1	83	Cyclomaltodextrin glycanotransferase, domain D {Th	98.43
d1cyga1	83	Cyclomaltodextrin glycanotransferase, domain D {Ba	98.4
d3brda1	119	DNA-binding protein LAG-1 (CSL) {Caenorhabditis el	98.39
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	98.36
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	97.68
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	97.64
d1imhc1	101	T-cell transcription factor NFAT5 (TONEBP) {Human	97.42
d1u36a_	104	p50 subunit of NF-kappa B transcription factor {Hu	96.56
d1a3qa1	101	p52 subunit of NF-kappa B (NFKB) {Human (Homo sapi	96.46
d1my7a_	107	p65 subunit of NF-kappa B (NFKB), dimerization dom	96.34
d1gjia1	100	p65 subunit of NF-kappa B (NFKB), dimerization dom	96.34
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	94.93

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.3e-19  Score=147.40  Aligned_cols=148  Identities=17%  Similarity=0.188  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
Q ss_conf             77799999959999999999599999844899996899999819922379988589999856889987789999729998
Q 002751          481 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE  560 (885)
Q Consensus       481 ~l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~e  560 (885)
                      .....+.... ...+++.+++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++..
T Consensus        72 ~~~~~~~~~~-~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~  150 (223)
T d1uoha_          72 SPLHIAASAG-RDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLK  150 (223)
T ss_dssp             CHHHHHHHHT-CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             CCCCCCCCCC-CCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCC
T ss_conf             3322222211-110167774068646754899996626988769899999999878999876899995010232138742


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH---HHHHHH
Q ss_conf             99999974999998779999999999399999816919899999972779887678656674306799996---599999
Q 002751          561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA---AEKANE  637 (885)
Q Consensus       561 iV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~g---~~~~Ve  637 (885)
                      ++++|+..+.+++..+      ..|+||||+|+..|+.+++++|++.|     ++++.+|.. |.+|.+++   +.++++
T Consensus       151 ~~~~L~~~~~~i~~~d------~~g~TpL~~Aa~~g~~~~v~~LL~~G-----ad~~~~d~~-g~tpl~~A~~~~~~i~~  218 (223)
T d1uoha_         151 MIHILLYYKASTNIQD------TEGNTPLHLACDEERVEEAKLLVSQG-----ASIYIENKE-EKTPLQVAKGGLGLILK  218 (223)
T ss_dssp             HHHHHHHTTCCSCCCC------TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTT-SCCHHHHCCTTHHHHHH
T ss_pred             HHHHHCCCCCEEEECC------CCCCCEECCCCCCCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHCCCHHHHH
T ss_conf             0233202232012036------88874112100258499999999877-----999887999-99999998778999983


Q ss_pred             HHHH
Q ss_conf             9998
Q 002751          638 TAAQ  641 (885)
Q Consensus       638 ~Lle  641 (885)
                      .|++
T Consensus       219 ~Ll~  222 (223)
T d1uoha_         219 RMVE  222 (223)
T ss_dssp             HHHC
T ss_pred             CCCC
T ss_conf             0047

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=2.3e-19  Score=147.45  Aligned_cols=152  Identities=20%  Similarity=0.163  Sum_probs=104.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC--------------------------
Q ss_conf             779999995999999999959999984489999689999981992237998858--------------------------
Q 002751          482 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT--------------------------  535 (885)
Q Consensus       482 l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~--------------------------  535 (885)
                      .++.++... ...+++.|++.|++++.+|..|.||||+|+..++.++++.|+..                          
T Consensus        48 pL~~A~~~g-~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (255)
T d1oy3d_          48 ALHLAAILG-EASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHA  126 (255)
T ss_dssp             HHHHHHHHT-CHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------
T ss_pred             CCCHHHHHC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCCHHH
T ss_conf             240687624-5432322223333322322222102333322682589999986142010122025666776522430677


Q ss_pred             ---------------------CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             ---------------------99998568899877899997299989999997499999877999999999939999981
Q 002751          536 ---------------------GVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASS  594 (885)
Q Consensus       536 ---------------------Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~  594 (885)
                                           +.+++.+|..|+||||+|+..|+.+++++|++.+++.+..++     ..|.||||+|+.
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~-----~~g~TpL~~A~~  201 (255)
T d1oy3d_         127 PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP-----TCGRTPLHLAVE  201 (255)
T ss_dssp             -----------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-----TTCCCHHHHHHH
T ss_pred             HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC-----CCCCCCCCCCCC
T ss_conf             999986203067899876532866331004676322333223222222100001333122133-----444332200123


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHHHHHCCCC
Q ss_conf             691989999997277988767865667430679999----659999999981988
Q 002751          595 RGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGVQ  645 (885)
Q Consensus       595 ~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~----g~~~~Ve~Lle~~a~  645 (885)
                      .|+.+++++|++.|     ++++.++.. |.+|.+.    ++.++++.|++.||+
T Consensus       202 ~~~~~~v~~Ll~~g-----adin~~d~~-g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         202 AQAASVLELLLKAG-----ADPTARMYG-GRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             TTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             33999999999878-----998887999-99999999987889999999976989

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.6e-18  Score=141.73  Aligned_cols=149  Identities=23%  Similarity=0.252  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             79999995999999999959999984489999689999981992237998858999985688998778999972999899
Q 002751          483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV  562 (885)
Q Consensus       483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV  562 (885)
                      ++.+.... ..-+++.++..+......+..+.+++++++..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++
T Consensus        41 Lh~Aa~~g-~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~  119 (223)
T d1uoha_          41 LHWACSAG-HTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIA  119 (223)
T ss_dssp             HHHHHHHT-CHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred             HHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCHHHH
T ss_conf             99999851-10243322222333332222222332222221111016777406864675489999662698876989999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHHHH
Q ss_conf             9999749999987799999999993999998169198999999727798876786566743067----999965999999
Q 002751          563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNV----AAALAAEKANET  638 (885)
Q Consensus       563 ~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~t----Aa~~g~~~~Ve~  638 (885)
                      ++|+++|++++..+      ..|.||||+|+..++..++++|.+.+.     +++..+.. |.+    |+..+..++|+.
T Consensus       120 ~~Ll~~g~d~~~~~------~~~~t~L~~a~~~~~~~~~~~L~~~~~-----~i~~~d~~-g~TpL~~Aa~~g~~~~v~~  187 (223)
T d1uoha_         120 VMLLEGGANPDAKD------HYEATAMHRAAAKGNLKMIHILLYYKA-----STNIQDTE-GNTPLHLACDEERVEEAKL  187 (223)
T ss_dssp             HHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTC-----CSCCCCTT-CCCHHHHHHHTTCHHHHHH
T ss_pred             HHHHHCCCCCCCCC------CCCCCCCHHHHHCCCCCHHHHHCCCCC-----EEEECCCC-CCCEECCCCCCCCHHHHHH
T ss_conf             99998789998768------999950102321387420233202232-----01203688-8741121002584999999


Q ss_pred             HHHCCC
Q ss_conf             998198
Q 002751          639 AAQIGV  644 (885)
Q Consensus       639 Lle~~a  644 (885)
                      |++.++
T Consensus       188 LL~~Ga  193 (223)
T d1uoha_         188 LVSQGA  193 (223)
T ss_dssp             HHHTTC
T ss_pred             HHHCCC
T ss_conf             998779

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.79  E-value=9.4e-19  Score=143.22  Aligned_cols=159  Identities=20%  Similarity=0.179  Sum_probs=128.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             79999995999999999959999984489999689999981992237998858999985688998778999972999899
Q 002751          483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV  562 (885)
Q Consensus       483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV  562 (885)
                      +..+.... ..-+++.|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..+.+||++++..++.+++
T Consensus        44 l~~A~~~G-~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~~~  122 (291)
T d1s70b_          44 FLAACSSG-DTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIA  122 (291)
T ss_dssp             HHHHHHHT-CHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred             HHHHHHCC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             99999858-89999999987999886689999699999861973121100122233333222323333333222211001


Q ss_pred             HHHHHCCCCCCCCC------------------------------------------------------CCCCCCCCCCCH
Q ss_conf             99997499999877------------------------------------------------------999999999939
Q 002751          563 IMLVKLGAAPGAVE------------------------------------------------------DPTPAFPGGQTA  588 (885)
Q Consensus       563 ~~LL~~GAd~~~~~------------------------------------------------------d~~~~d~~G~TP  588 (885)
                      +.|+..|+..+..+                                                      +....+..|.||
T Consensus       123 ~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~  202 (291)
T d1s70b_         123 EYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTA  202 (291)
T ss_dssp             HHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCH
T ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCH
T ss_conf             10124676422222467642222111222000100000246532110000133322110011012321100246789873


Q ss_pred             HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHCCC-CCCC
Q ss_conf             9999816919899999972779887678656674306----7999965999999998198-8899
Q 002751          589 ADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAEKANETAAQIGV-QSDG  648 (885)
Q Consensus       589 LhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~----tAa~~g~~~~Ve~Lle~~a-~~~~  648 (885)
                      ||+|+..|+.+++++|++.|+     +++.++.. |.    .|+..++.++|+.|++.|+ .+..
T Consensus       203 L~~a~~~~~~~~~~~Ll~~g~-----din~~~~~-g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~  261 (291)
T d1s70b_         203 LHVAAAKGYTEVLKLLIQARY-----DVNIKDYD-GWTPLHAAAHWGKEEACRILVENLCDMEAV  261 (291)
T ss_dssp             HHHHHHHTCHHHHHHHHTTTC-----CTTCCCTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred             HHHHHHCCCHHHHCCCCCCEE-----CCCCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
T ss_conf             048887699544101344101-----12421257-988999999859899999999879999886

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=3.2e-18  Score=139.58  Aligned_cols=75  Identities=25%  Similarity=0.281  Sum_probs=38.8

Q ss_pred             HHHHHHHCCCC---CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf             99999959999---9844899996899999819922379988589999856889987789999729998999999749
Q 002751          495 LVWKIHEGGKG---PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLG  569 (885)
Q Consensus       495 Lv~~Lle~Gad---in~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~G  569 (885)
                      +++.|++.|++   ++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+..+
T Consensus        24 ~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~  101 (255)
T d1oy3d_          24 FLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPR  101 (255)
T ss_dssp             HHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSC
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             999999869990011575899997240687624543232222333332232222210233332268258999998614

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=4.7e-18  Score=138.44  Aligned_cols=138  Identities=24%  Similarity=0.235  Sum_probs=109.3

Q ss_pred             HHHHHHHCCCCC--CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-C
Q ss_conf             999999599999--8448999968999998199223799885899998568899877899997299989999997499-9
Q 002751          495 LVWKIHEGGKGP--NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGA-A  571 (885)
Q Consensus       495 Lv~~Lle~Gadi--n~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GA-d  571 (885)
                      ++..++..+...  ...+..+.++|+.++..++.+++..|+..|.+++.+|..|+||||+|+..|+.+++++|+..+. +
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~  164 (229)
T d1ixva_          85 VVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA  164 (229)
T ss_dssp             HHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
T ss_conf             33332222222222223223344332212320034322221100232124788997350232124533233332222222


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHHHHHCCC
Q ss_conf             99877999999999939999981691989999997-2779887678656674306799996-5999999998198
Q 002751          572 PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE-ADLSSHLSSLTVNENGMDNVAAALA-AEKANETAAQIGV  644 (885)
Q Consensus       572 ~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle-~Ga~~~l~dln~kd~~~g~tAa~~g-~~~~Ve~Lle~~a  644 (885)
                      ++.++      ..|.||||+|+..|+.+++++|++ .|     ++++.++.. |.+|.+++ ..++++.|++.|+
T Consensus       165 in~~d------~~g~TpLh~A~~~~~~~~v~~Ll~~~g-----ad~~~~d~~-g~t~l~~A~~~~~~~~Ll~~g~  227 (229)
T d1ixva_         165 VNWQD------KQGWTPLFHALAEGHGDAAVLLVEKYG-----AEYDLVDNK-GAKAEDVALNEQVKKFFLNNVV  227 (229)
T ss_dssp             SCCCC------TTSCCHHHHHHHTTCHHHHHHHHHHHC-----CCSCCCCTT-SCCTGGGCSCHHHHHHHHHHCC
T ss_pred             CCCCC------CCCCCCHHHHCCCCCHHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHHHHHHHHHHHCCC
T ss_conf             22356------666781022101251999999999659-----998885899-9999999846789999997699

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.76  E-value=4.2e-17  Score=131.86  Aligned_cols=144  Identities=17%  Similarity=0.138  Sum_probs=104.7

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC---C
Q ss_conf             9999995999998448999968999998199223799885899998568899877899997299989999997499---9
Q 002751          495 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGA---A  571 (885)
Q Consensus       495 Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GA---d  571 (885)
                      ..+.+++.|++||.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++..++..+.   .
T Consensus        56 ~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~  135 (277)
T d2fo1e1          56 EAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD  135 (277)
T ss_dssp             HHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT
T ss_pred             CHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCC
T ss_conf             23679876997645478888510034333333333333223222332222222222100110000123444311454222


Q ss_pred             CCCC--------------------------------------CCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCCC
Q ss_conf             9987--------------------------------------799999999993999998169198999999-7277988
Q 002751          572 PGAV--------------------------------------EDPTPAFPGGQTAADLASSRGHKGIAGYLA-EADLSSH  612 (885)
Q Consensus       572 ~~~~--------------------------------------~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLl-e~Ga~~~  612 (885)
                      .+..                                      ..++..+..|.||||+++..++.+++.+++ ..+    
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~----  211 (277)
T d2fo1e1         136 IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG----  211 (277)
T ss_dssp             TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC----
T ss_pred             CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----
T ss_conf             2222221103678887503433222221001123322222234555446689870000122333222223222345----


Q ss_pred             CCCCCCCCCCCHHH----HHHHHHHHHHHHHHHCCC
Q ss_conf             76786566743067----999965999999998198
Q 002751          613 LSSLTVNENGMDNV----AAALAAEKANETAAQIGV  644 (885)
Q Consensus       613 l~dln~kd~~~g~t----Aa~~g~~~~Ve~Lle~~a  644 (885)
                       .+.+.++.. |.+    |+..+..++++.|++.++
T Consensus       212 -~~~~~~d~~-g~tpL~~A~~~g~~~iv~~Ll~~ga  245 (277)
T d2fo1e1         212 -SNKDKQDED-GKTPIMLAAQEGRIEVVMYLIQQGA  245 (277)
T ss_dssp             -CCTTCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             -CCCCCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             -433346899-9989999998598999999998769

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=1.6e-17  Score=134.70  Aligned_cols=108  Identities=18%  Similarity=0.196  Sum_probs=96.2

Q ss_pred             HHHHHCCCCCCCC------CCCCCCHHHHHHHC---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             9999599999844------89999689999981---99223799885899998568899877899997299989999997
Q 002751          497 WKIHEGGKGPNVI------DDGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVK  567 (885)
Q Consensus       497 ~~Lle~Gadin~~------D~~G~TpLHlAA~~---G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~  567 (885)
                      ..++..|.+++..      +..|+||||+|+..   |+.+++++|+++|+++|.+|..|+||||+||..|+.+++++|++
T Consensus        23 ~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~  102 (154)
T d1dcqa1          23 LQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR  102 (154)
T ss_dssp             HHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99998699867777754578999826999998328998999999997499733313121010001111233332212213


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             4999998779999999999399999816919899999972779
Q 002751          568 LGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLS  610 (885)
Q Consensus       568 ~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~  610 (885)
                      .|++++.++      ..|.||||+|+..|+.+++++|++.+..
T Consensus       103 ~gad~~~~d------~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1         103 GKASIEIAN------ESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             TTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             CCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHHCCC
T ss_conf             575502447------8999999999993999999999993889

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=4e-18  Score=138.93  Aligned_cols=58  Identities=16%  Similarity=0.172  Sum_probs=49.7

Q ss_pred             HCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             599999844-8999968999998199223799885899998568899877899997299
Q 002751          501 EGGKGPNVI-DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR  558 (885)
Q Consensus       501 e~Gadin~~-D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~  558 (885)
                      ..+.++|.. |..|+||||+||..|+.++|++|++.|++++.+|..|+||||+||..++
T Consensus        94 ~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~  152 (301)
T d1sw6a_          94 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN  152 (301)
T ss_dssp             TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf             66878686868999888999998679999999998789977677643517777422022

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.3e-18  Score=138.08  Aligned_cols=111  Identities=28%  Similarity=0.258  Sum_probs=85.9

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf             99999999599999844899996899999819922379988589999856889987789999729998999999749999
Q 002751          493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP  572 (885)
Q Consensus       493 e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~  572 (885)
                      .-+++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.+|+.+++++|+++|+++
T Consensus        14 ~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~v   93 (130)
T d1ycsb1          14 FDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV   93 (130)
T ss_dssp             HHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             99999999869975610021111112222222222222222222222221236764222321026889999999869986


Q ss_pred             CCCCCCCCCCCCCCCHHHHH--HHCCCHHHHHHHHHCC
Q ss_conf             98779999999999399999--8169198999999727
Q 002751          573 GAVEDPTPAFPGGQTAADLA--SSRGHKGIAGYLAEAD  608 (885)
Q Consensus       573 ~~~~d~~~~d~~G~TPLhlA--a~~Gh~eiv~lLle~G  608 (885)
                      +..+.     ..|.||++++  ...||.+++++|++.+
T Consensus        94 ~~~~~-----~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          94 FAMTY-----SDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             TCCCS-----SSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             CCCCC-----CCCCCHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             64668-----9998899999999868299999998678

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.4e-17  Score=135.06  Aligned_cols=103  Identities=22%  Similarity=0.275  Sum_probs=54.4

Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
Q ss_conf             99999599999844899996899999819922379988589999856889987789999729998999999749999987
Q 002751          496 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAV  575 (885)
Q Consensus       496 v~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~  575 (885)
                      ++.|++.|++++..+..+.||||.++..+..++++.++..|+++|.+|..|.||||+|+..|+.++|++|+++||+++.+
T Consensus       280 ~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~  359 (408)
T d1n11a_         280 ADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEV  359 (408)
T ss_dssp             HHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
T ss_conf             99999779965621023445302210058621355301333322346899999999999868899999999878899887


Q ss_pred             CCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             79999999999399999816919899999
Q 002751          576 EDPTPAFPGGQTAADLASSRGHKGIAGYL  604 (885)
Q Consensus       576 ~d~~~~d~~G~TPLhlAa~~Gh~eiv~lL  604 (885)
                      +      ..|.||||+|+.+||.+++++|
T Consensus       360 d------~~G~t~L~~A~~~~~~~iv~~L  382 (408)
T d1n11a_         360 S------SDGTTPLAIAKRLGYISVTDVL  382 (408)
T ss_dssp             C------SSSCCHHHHHHHTTCHHHHHHH
T ss_pred             C------CCCCCHHHHHHHCCCHHHHHHH
T ss_conf             9------9998999999983999999999

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.74  E-value=7.9e-18  Score=136.86  Aligned_cols=105  Identities=23%  Similarity=0.217  Sum_probs=97.6

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf             99999995999998448999968999998199223799885899998568899877899997299989999997499999
Q 002751          494 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPG  573 (885)
Q Consensus       494 ~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~  573 (885)
                      .....+...+++++..+..|.|+||+++..+...++..++..+++++.+|..|.||||+||..|+.+++++|++.|++++
T Consensus       104 ~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n  183 (209)
T d1ot8a_         104 GMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANRE  183 (209)
T ss_dssp             THHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCC
T ss_conf             23555531014655557799982300003686314532012222345443444552112103249999999998799998


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             8779999999999399999816919899999
Q 002751          574 AVEDPTPAFPGGQTAADLASSRGHKGIAGYL  604 (885)
Q Consensus       574 ~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lL  604 (885)
                      ..+      ..|+||||+|+.+||.+++++|
T Consensus       184 ~~d------~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         184 ITD------HMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             CCC------TTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCC------CCCCCHHHHHHHCCCHHHHHHC
T ss_conf             868------9999999999986879899643

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1e-16  Score=129.19  Aligned_cols=146  Identities=21%  Similarity=0.277  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             79999995999999999959999984489999689999981992237998858999985688998778999972999899
Q 002751          483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV  562 (885)
Q Consensus       483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV  562 (885)
                      +..+......+.+..+|...++++|.+|..|.||||+|+ .|+.+++..|+..+++++..+..|.+|+++++..++.+++
T Consensus         6 L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~   84 (156)
T d1bd8a_           6 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTL   84 (156)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             999999589999999999589998864899984133432-2222222222222222222222222222222222222222


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHH
Q ss_conf             99997499999877999999999939999981691989999997277988767865667430679999----65999999
Q 002751          563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANET  638 (885)
Q Consensus       563 ~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~----g~~~~Ve~  638 (885)
                      +.+++.|++++.++      ..|.||||+|+..|+.+++++|+ .|     .+++.++.. |.||.+.    ++.++++.
T Consensus        85 ~~~l~~~~~~n~~~------~~~~t~L~~A~~~~~~~i~~~L~-~~-----~~~~~~d~~-G~TpL~~A~~~g~~~iv~~  151 (156)
T d1bd8a_          85 KVLVEHGADVNVPD------GTGALPIHLAVQEGHTAVVSFLA-AE-----SDLHRRDAR-GLTPLELALQRGAQDLVDI  151 (156)
T ss_dssp             HHHHHTTCCSCCCC------TTSCCHHHHHHHHTCHHHHHHHH-TT-----SCTTCCCTT-SCCHHHHHHHSCCHHHHHH
T ss_pred             CCCCCCCCCCCCCC------CCCCEEECCCCCCCCCCCCCCCC-CC-----CCCCCCCCC-CCCHHHHHHHCCCHHHHHH
T ss_conf             22222212211236------77872221222233222211112-22-----566466899-9999999998598999999


Q ss_pred             HHHC
Q ss_conf             9981
Q 002751          639 AAQI  642 (885)
Q Consensus       639 Lle~  642 (885)
                      |+++
T Consensus       152 Ll~h  155 (156)
T d1bd8a_         152 LQGH  155 (156)
T ss_dssp             HHTT
T ss_pred             HHHH
T ss_conf             9966

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=6.7e-16  Score=123.62  Aligned_cols=125  Identities=22%  Similarity=0.151  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCC----HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             7799999959999999999-5999998448999968999998199----2237998858999985688998778999972
Q 002751          482 LIQNLLRNRLCEWLVWKIH-EGGKGPNVIDDGGQGVVHLAAALGY----EWAMRPIIATGVSPNFRDARGRTALHWASYF  556 (885)
Q Consensus       482 l~~~aL~~~l~e~Lv~~Ll-e~Gadin~~D~~G~TpLHlAA~~G~----~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~  556 (885)
                      .++.+...... .+++.|+ +.|++++..+..|.++++.+...+.    ..+++.|++.|++++.+|..|.||||+|+..
T Consensus       151 ~L~~A~~~~~~-~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~  229 (285)
T d1wdya_         151 ALMDAAEKGHV-EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK  229 (285)
T ss_dssp             HHHHHHHHTCH-HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHT
T ss_pred             HHHHHHHCCCH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHC
T ss_conf             99999986899-99999984569894554678983322332234301799999999977999886689999824112213


Q ss_pred             CCHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             999899999974-999998779999999999399999816919899999972779887
Q 002751          557 GREETVIMLVKL-GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL  613 (885)
Q Consensus       557 G~~eiV~~LL~~-GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l  613 (885)
                      |+.+++++|+.. |++++.++      ..|.||||+|+.+|+.+++++|+++|++++.
T Consensus       230 ~~~~~v~~lL~~~g~din~~d------~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~  281 (285)
T d1wdya_         230 KHLGLVQRLLEQEHIEINDTD------SDGKTALLLAVELKLKKIAELLCKRGASTDC  281 (285)
T ss_dssp             TCHHHHHHHHHSSSCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred             CCHHHHHHHHHCCCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf             869999999980899986879------9998999999985979999999987989986

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.3e-16  Score=128.57  Aligned_cols=147  Identities=20%  Similarity=0.180  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             79999995999999999959999984489999689999981992237998858999985688998778999972999899
Q 002751          483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV  562 (885)
Q Consensus       483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV  562 (885)
                      ++.++... ...+++.+...+..++..|..|.||||.|+..++..++++|++.|++++..+..+.||||.++..++.+++
T Consensus       235 l~~a~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~  313 (408)
T d1n11a_         235 LHLAAQEG-HAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV  313 (408)
T ss_dssp             HHHHHHTT-CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHH
T ss_pred             HHHHHHHC-CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEE
T ss_conf             99999808-67675442002211111247899733454302848999999977996562102344530221005862135


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHH
Q ss_conf             999974999998779999999999399999816919899999972779887678656674306799996----5999999
Q 002751          563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----AEKANET  638 (885)
Q Consensus       563 ~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~g----~~~~Ve~  638 (885)
                      +.++..|++++.++      ..|.||||+|+.+|+.+++++|+++|     ++++.++.. |.+|.+.+    +.++|+.
T Consensus       314 ~~ll~~g~~in~~d------~~G~T~Lh~A~~~g~~~iv~~Ll~~G-----Ad~n~~d~~-G~t~L~~A~~~~~~~iv~~  381 (408)
T d1n11a_         314 KFLLQHQADVNAKT------KLGYSPLHQAAQQGHTDIVTLLLKNG-----ASPNEVSSD-GTTPLAIAKRLGYISVTDV  381 (408)
T ss_dssp             HHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCSS-SCCHHHHHHHTTCHHHHHH
T ss_pred             EEECCCCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHHCCCHHHHHH
T ss_conf             53013333223468------99999999999868899999999878-----899887999-9899999998399999999


Q ss_pred             HHHC
Q ss_conf             9981
Q 002751          639 AAQI  642 (885)
Q Consensus       639 Lle~  642 (885)
                      |...
T Consensus       382 L~~~  385 (408)
T d1n11a_         382 LKVV  385 (408)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9998

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=7.5e-19  Score=143.89  Aligned_cols=111  Identities=23%  Similarity=0.149  Sum_probs=92.8

Q ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             96899999819922379988589999856889987789999729998999999749999987799999999993999998
Q 002751          514 QGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS  593 (885)
Q Consensus       514 ~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa  593 (885)
                      .|||++|+..|+.++|+.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.++      ..|+||||+|+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d------~~g~tpLh~A~   76 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD------KHHITPLLSAV   76 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCS------SSCSCHHHHHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC------CCCCCCHHHHH
T ss_conf             728999998779999999998420122322222222222222222222222334320233101------23321022332


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             1691989999997277988767865667430679999659999
Q 002751          594 SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKAN  636 (885)
Q Consensus       594 ~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~g~~~~V  636 (885)
                      .+|+.+++++|++.|     ++++.++.. |.+|.+.+..+.+
T Consensus        77 ~~~~~~~v~~Ll~~G-----ad~~~~d~~-G~t~l~~a~~~~i  113 (118)
T d1myoa_          77 YEGHVSCVKLLLSKG-----ADKTVKGPD-GLTALEATDNQAI  113 (118)
T ss_dssp             TTTCCHHHHHHHTTC-----CCSSSSSSS-TCCCCCTCSSTTT
T ss_pred             HCCCHHHHHHHHCCC-----CCCEEECCC-CCCHHHHHHHHHH
T ss_conf             047324324331020-----000003899-9999999868799

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.3e-16  Score=126.77  Aligned_cols=148  Identities=17%  Similarity=0.227  Sum_probs=125.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             79999995999999999959999984489999689999981992237998858999985688998778999972999899
Q 002751          483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV  562 (885)
Q Consensus       483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV  562 (885)
                      ++.+.... ...+++.|+++|+++|.+|..|.||||+|+ .|+.+++++|+..|++++.++..|.+++++++..++..++
T Consensus         5 Lh~Aa~~g-~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~~   82 (156)
T d1ihba_           5 LASAAARG-DLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTL   82 (156)
T ss_dssp             HHHHHHHT-CHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred             HHHHHHCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99999867-999999999878796746774453212222-2222222222222222212123575322233222222222


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHH
Q ss_conf             99997499999877999999999939999981691989999997277988767865667430679999----65999999
Q 002751          563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANET  638 (885)
Q Consensus       563 ~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~----g~~~~Ve~  638 (885)
                      ..|+..+.+++..+      ..|.+|+++|+..++.+++++|++.+.    .+.+.++.. |.||.+.    ++.++++.
T Consensus        83 ~~l~~~~~~~~~~~------~~~~~~l~~a~~~~~~~~~~~Ll~~~~----~~~~~~d~~-g~TpL~~A~~~~~~~iv~~  151 (156)
T d1ihba_          83 QTLLEFQADVNIED------NEGNLPLHLAAKEGHLRVVEFLVKHTA----SNVGHRNHK-GDTACDLARLYGRNEVVSL  151 (156)
T ss_dssp             HHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHSC----CCTTCCCTT-SCCHHHHHHHTTCHHHHHH
T ss_pred             CCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCC-CCCHHHHHHHCCCHHHHHH
T ss_conf             22211222222356------443211223333221222222221220----112245899-9899999998398999999


Q ss_pred             HHHCC
Q ss_conf             99819
Q 002751          639 AAQIG  643 (885)
Q Consensus       639 Lle~~  643 (885)
                      |++.|
T Consensus       152 Ll~~G  156 (156)
T d1ihba_         152 MQANG  156 (156)
T ss_dssp             HHHTC
T ss_pred             HHHCC
T ss_conf             99667

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.9e-17  Score=134.25  Aligned_cols=117  Identities=23%  Similarity=0.317  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHCCCHH
Q ss_conf             779999995999999999959999984489999689999981992237998858999985688998-7789999729998
Q 002751          482 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR-TALHWASYFGREE  560 (885)
Q Consensus       482 l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~-TpLH~Aa~~G~~e  560 (885)
                      .++.+.... ...+++.|++.|+++|.+|..|.||||+|+ .|+.+++++|++.|++++.++..|. ||||+||..|+.+
T Consensus         6 ~L~~Aa~~G-~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~~~   83 (125)
T d1bi7b_           6 WLATAAARG-RVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD   83 (125)
T ss_dssp             HHHHHHHHT-CHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHH
T ss_pred             HHHHHHHCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             999999877-999999999859741332221222222222-222222221222222222222222222222222322222


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             9999997499999877999999999939999981691989999997
Q 002751          561 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE  606 (885)
Q Consensus       561 iV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle  606 (885)
                      ++++|++.|++++..+      ..|+||||+|+.+|+.+++++|+.
T Consensus        84 ~v~~Ll~~ga~~~~~d------~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          84 TLVVLHRAGARLDVRD------AWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHTCCSSCCC------TTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             CCCCCCCCCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf             2222212222233245------789899999998687999999995

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.6e-17  Score=132.32  Aligned_cols=119  Identities=21%  Similarity=0.180  Sum_probs=99.6

Q ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             96899999819922379988589999856889987789999729998999999749999987799999999993999998
Q 002751          514 QGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLAS  593 (885)
Q Consensus       514 ~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa  593 (885)
                      .++||.||..|+.++|+.|++.|+++|.+|..|+||||+|+..|+.+++++|++.|++++..+      ..|+||||+|+
T Consensus         2 l~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d------~~g~tpLh~A~   75 (130)
T d1ycsb1           2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD------SDGWTPLHCAA   75 (130)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC------TTCCCHHHHHH
T ss_pred             HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCC
T ss_conf             599999999399999999998699756100211111122222222222222222222222212------36764222321


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH------HHHHHHHHHHHCC
Q ss_conf             1691989999997277988767865667430679999------6599999999819
Q 002751          594 SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL------AAEKANETAAQIG  643 (885)
Q Consensus       594 ~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~------g~~~~Ve~Lle~~  643 (885)
                      .+|+.+++++|++.|++.     +..+...+.++...      ++.+++++|++..
T Consensus        76 ~~g~~~~v~~Ll~~ga~v-----~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          76 SCNNVQVCKFLVESGAAV-----FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             HTTCHHHHHHHHHTTCCT-----TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCC-----CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             026889999999869986-----646689998899999999868299999998678

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.7e-16  Score=127.70  Aligned_cols=162  Identities=22%  Similarity=0.237  Sum_probs=110.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHH---HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC------CC
Q ss_conf             69998625777799999959---9999999995999998448999968999998199223799885899998------56
Q 002751          472 EGDCPNSRDKLIQNLLRNRL---CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN------FR  542 (885)
Q Consensus       472 ~~~~in~~d~l~~~aL~~~l---~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin------~~  542 (885)
                      .+.++|.++..+.++|+...   ...+++.|++.|++++..|..|.||||+++..|+..+++.|+..+....      ..
T Consensus        28 ~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  107 (221)
T d1iknd_          28 DLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKAT  107 (221)
T ss_dssp             -CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
T ss_conf             79975367899995463433433222333322222222223223222222233322222111011101323332222222


Q ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             88998778999972999899999974999998779999999999399999816919899999972779887678656674
Q 002751          543 DARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENG  622 (885)
Q Consensus       543 D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~  622 (885)
                      ...|.||||+|+..++.+++.+|+..|+..+..++     ..|.||||+|+..|+.+++++|++.|     ++++.++..
T Consensus       108 ~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-----~~G~T~L~~A~~~g~~~~v~~Ll~~g-----ad~~~~~~~  177 (221)
T d1iknd_         108 NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP-----CNGRTALHLAVDLQNPDLVSLLLKCG-----ADVNRVTYQ  177 (221)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-----TTCCCHHHHHHHTTCHHHHHHHHTTT-----CCSCCCCTT
T ss_pred             CCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCC-----CCCCCCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCC
T ss_conf             33432135677555982230100136863112244-----67778431111222489888898638-----864566999


Q ss_pred             CHHHHHHHH----HHHHHHHHHHCCC
Q ss_conf             306799996----5999999998198
Q 002751          623 MDNVAAALA----AEKANETAAQIGV  644 (885)
Q Consensus       623 ~g~tAa~~g----~~~~Ve~Lle~~a  644 (885)
                       |.+|.+++    ..++++.|.+...
T Consensus       178 -G~tpl~~A~~~~~~~~~~~l~~~~~  202 (221)
T d1iknd_         178 -GYSPYQLTWGRPSTRIQQQLGQLTL  202 (221)
T ss_dssp             -CCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred             -CCCHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             -9899999998788999999998287

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.6e-16  Score=127.97  Aligned_cols=155  Identities=20%  Similarity=0.164  Sum_probs=123.9

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf             99999999599999844899996899999819922379988589999856889987789999729998999999749999
Q 002751          493 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP  572 (885)
Q Consensus       493 e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~  572 (885)
                      ..+++.+...|+++|.+|..|+||||+|+..|+..++++|++.|++++.+|..|+||||+++..|+.++++.|+..+...
T Consensus        19 ~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~   98 (221)
T d1iknd_          19 MEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTP   98 (221)
T ss_dssp             SCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTT
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
T ss_conf             99999998679975367899995463433433222333322222222223223222222233322222111011101323


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCC
Q ss_conf             987799999999993999998169198999999727798876786566743067999965999999998198-8899
Q 002751          573 GAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV-QSDG  648 (885)
Q Consensus       573 ~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~g~~~~Ve~Lle~~a-~~~~  648 (885)
                      ............|.||++.|+..++.+++.+|+..|...+..+-.-.... ...|+..++.++++.|++.++ ....
T Consensus        99 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~-L~~A~~~g~~~~v~~Ll~~gad~~~~  174 (221)
T d1iknd_          99 HLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTA-LHLAVDLQNPDLVSLLLKCGADVNRV  174 (221)
T ss_dssp             SSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH-HHHHHHTTCHHHHHHHHTTTCCSCCC
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf             33222222233432135677555982230100136863112244677784-31111222489888898638864566

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.70  E-value=2.2e-16  Score=126.95  Aligned_cols=90  Identities=24%  Similarity=0.268  Sum_probs=59.5

Q ss_pred             CCCCHHHHHHHCCCHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             999689999981992237998--------858999985688998778999972999899999974999998779999999
Q 002751          512 GGQGVVHLAAALGYEWAMRPI--------IATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFP  583 (885)
Q Consensus       512 ~G~TpLHlAA~~G~~~iV~~L--------L~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~  583 (885)
                      .|+||||+||..|+.++++.|        +..|+|||.+|..|+||||+|+..|+.+++++|++.|++++..+      .
T Consensus        32 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~------~  105 (277)
T d2fo1e1          32 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN------K  105 (277)
T ss_dssp             SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC------T
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC------C
T ss_conf             9966999999868999999999652367987699764547888851003433333333333322322233222------2


Q ss_pred             CCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             999399999816919899999972
Q 002751          584 GGQTAADLASSRGHKGIAGYLAEA  607 (885)
Q Consensus       584 ~G~TPLhlAa~~Gh~eiv~lLle~  607 (885)
                      .|.||+++|...++.++..++...
T Consensus       106 ~g~t~l~~a~~~~~~~~~~~l~~~  129 (277)
T d2fo1e1         106 SERSALHQAAANRDFGMMVYMLNS  129 (277)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHTTS
T ss_pred             CCCCCCCCHHHHCCHHHHHHHHHC
T ss_conf             222222100110000123444311

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.1e-16  Score=127.06  Aligned_cols=128  Identities=23%  Similarity=0.300  Sum_probs=107.5

Q ss_pred             CCCCCCCCHHHHHHHHHH--HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf             999862577779999995--999999999959999984489999689999981992237998858999985688998778
Q 002751          473 GDCPNSRDKLIQNLLRNR--LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTAL  550 (885)
Q Consensus       473 ~~~in~~d~l~~~aL~~~--l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpL  550 (885)
                      +.+++..+..+.++|...  ....++..|++.+.+++..+..|.+||++++..++..+++.++..|+++|.+|..|+|||
T Consensus        26 ~~~~n~~d~~g~t~L~~A~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t~L  105 (156)
T d1bd8a_          26 LVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI  105 (156)
T ss_dssp             CCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf             99988648999841334322222222222222222222222222222222222222222222222122112367787222


Q ss_pred             HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             999972999899999974999998779999999999399999816919899999972
Q 002751          551 HWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA  607 (885)
Q Consensus       551 H~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~  607 (885)
                      |+||..|+.+++++|+ .|++++.++      ..|+||||+|+..|+.+++++|+++
T Consensus       106 ~~A~~~~~~~i~~~L~-~~~~~~~~d------~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         106 HLAVQEGHTAVVSFLA-AESDLHRRD------ARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHTCHHHHHHHH-TTSCTTCCC------TTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCC-CCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHH
T ss_conf             1222233222211112-225664668------9999999999985989999999966

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=7e-16  Score=123.50  Aligned_cols=163  Identities=17%  Similarity=0.136  Sum_probs=108.2

Q ss_pred             CHHHHHHHH---HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             777799999---95999999999959999984489999689999981992237998858999985688998778999972
Q 002751          480 DKLIQNLLR---NRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF  556 (885)
Q Consensus       480 d~l~~~aL~---~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~  556 (885)
                      +..++.++.   ....++|+..+.+.|+++|.+|..|+||||+|+..|+.++++.|+++|++++..+..|.++++.|...
T Consensus         4 ~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~~~   83 (228)
T d1k1aa_           4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEH   83 (228)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             42999999839999999999989977997776689999624100013553333333222223343333222333222223


Q ss_pred             CCHHHHHHHHHCCCCCCCC--------------------------------CCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             9998999999749999987--------------------------------79999999999399999816919899999
Q 002751          557 GREETVIMLVKLGAAPGAV--------------------------------EDPTPAFPGGQTAADLASSRGHKGIAGYL  604 (885)
Q Consensus       557 G~~eiV~~LL~~GAd~~~~--------------------------------~d~~~~d~~G~TPLhlAa~~Gh~eiv~lL  604 (885)
                      ++..++..+..........                                +........|.+|++.|+..+...++..+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~  163 (228)
T d1k1aa_          84 RSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL  163 (228)
T ss_dssp             TCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             45210023442045432232233332222222222222100134430012332222100025578898875100234432


Q ss_pred             HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             9727798876786566743067999965999999998198
Q 002751          605 AEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV  644 (885)
Q Consensus       605 le~Ga~~~l~dln~kd~~~g~tAa~~g~~~~Ve~Lle~~a  644 (885)
                      ++.|......+.+...  +...|+..++.++++.|++.++
T Consensus       164 ~~~~~~~~~~d~~g~t--~L~~A~~~g~~~~v~~Ll~~Ga  201 (228)
T d1k1aa_         164 LQHGANVNAQMYSGSS--ALHSASGRGLLPLVRTLVRSGA  201 (228)
T ss_dssp             HHTTCCTTCBCTTSCB--HHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHCCCCCCCCCCCCC--HHHHHHHCCCHHHHHHHHHCCC
T ss_conf             2202232221236861--6899998587999999998789

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.69  E-value=5.5e-16  Score=124.22  Aligned_cols=115  Identities=23%  Similarity=0.268  Sum_probs=76.6

Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             99689999981992237998858999985688998778999972999899999974999998779999999999399999
Q 002751          513 GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA  592 (885)
Q Consensus       513 G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlA  592 (885)
                      |.++.+.+.........+.|+..+++++.++..|+|||++++..+...++..|+..+++++..+      ..|.||||+|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d------~~g~TpL~~A  163 (209)
T d1ot8a_          90 GTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQD------DKDETPLFLA  163 (209)
T ss_dssp             CCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTCCCHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCC------CCCCCCCCHH
T ss_conf             3332222222210123555531014655557799982300003686314532012222345443------4445521121


Q ss_pred             HHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHHH
Q ss_conf             81691989999997277988767865667430679999----659999999
Q 002751          593 SSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETA  639 (885)
Q Consensus       593 a~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~----g~~~~Ve~L  639 (885)
                      +..|+.+++++|++.|     ++++.++.. |.+|.++    ++.++|++|
T Consensus       164 ~~~g~~~~v~~Ll~~g-----ad~n~~d~~-g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         164 AREGSYEASKALLDNF-----ANREITDHM-DRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHHCCCHHHHHHC
T ss_conf             0324999999999879-----999886899-99999999986879899643

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.8e-15  Score=119.35  Aligned_cols=144  Identities=23%  Similarity=0.241  Sum_probs=113.4

Q ss_pred             HHHHHHHHHCCCCCCC----------CCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHC----C
Q ss_conf             9999999959999984----------489999689999981992237998858-999985688998778999972----9
Q 002751          493 EWLVWKIHEGGKGPNV----------IDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYF----G  557 (885)
Q Consensus       493 e~Lv~~Lle~Gadin~----------~D~~G~TpLHlAA~~G~~~iV~~LL~~-Gadin~~D~~G~TpLH~Aa~~----G  557 (885)
                      ...+..++....+++.          .+..|.||||+|+..|+.+++++|+.. |++++..+..|.++++.+...    +
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  197 (285)
T d1wdya_         118 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD  197 (285)
T ss_dssp             HHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTT
T ss_pred             HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             12544544310011323210122222014685699999986899999999845698945546789833223322343017


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCCCCHHH----HHHHHH
Q ss_conf             99899999974999998779999999999399999816919899999972-7798876786566743067----999965
Q 002751          558 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA-DLSSHLSSLTVNENGMDNV----AAALAA  632 (885)
Q Consensus       558 ~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~-Ga~~~l~dln~kd~~~g~t----Aa~~g~  632 (885)
                      ...+++.|++.|++++..+      ..|.||||+|+..|+.+++++|++. |     .+++.++.. |.|    |+..++
T Consensus       198 ~~~i~~~Li~~ga~~n~~~------~~g~t~L~~a~~~~~~~~v~~lL~~~g-----~din~~d~~-G~TpL~~A~~~~~  265 (285)
T d1wdya_         198 VEAITHLLLDHGADVNVRG------ERGKTPLILAVEKKHLGLVQRLLEQEH-----IEINDTDSD-GKTALLLAVELKL  265 (285)
T ss_dssp             HHHHHHHHHHTTCCSSCCC------TTSCCHHHHHHHTTCHHHHHHHHHSSS-----CCTTCCCTT-SCCHHHHHHHTTC
T ss_pred             HHHHHHHHHHCCCCCCCCC------CCCCCCCCHHHHCCCHHHHHHHHHCCC-----CCCCCCCCC-CCCHHHHHHHCCC
T ss_conf             9999999997799988668------999982411221386999999998089-----998687999-9899999998597


Q ss_pred             HHHHHHHHHCCC-CCCC
Q ss_conf             999999998198-8899
Q 002751          633 EKANETAAQIGV-QSDG  648 (885)
Q Consensus       633 ~~~Ve~Lle~~a-~~~~  648 (885)
                      .++|+.|++.|| ++..
T Consensus       266 ~eiv~~Ll~~GAd~n~~  282 (285)
T d1wdya_         266 KKIAELLCKRGASTDCG  282 (285)
T ss_dssp             HHHHHHHHHHSSCSCCS
T ss_pred             HHHHHHHHHCCCCCCCC
T ss_conf             99999999879899860

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.67  E-value=1.1e-15  Score=122.25  Aligned_cols=160  Identities=21%  Similarity=0.133  Sum_probs=87.0

Q ss_pred             CCCCCCCCCCHHHHHHHHHHH---HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC-----
Q ss_conf             369998625777799999959---999999999599999844899996899999819922379988589999856-----
Q 002751          471 IEGDCPNSRDKLIQNLLRNRL---CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFR-----  542 (885)
Q Consensus       471 ~~~~~in~~d~l~~~aL~~~l---~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~-----  542 (885)
                      ..|.++|..|..+.++|....   ...+++.|++.|.+++..+..+.+|||+++..++.++++.|+.+|+..+..     
T Consensus        61 ~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~  140 (291)
T d1s70b_          61 ERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGD  140 (291)
T ss_dssp             HHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
T ss_conf             87999886689999699999861973121100122233333222323333333222211001101246764222224676


Q ss_pred             -------------------------------------------------------CCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             -------------------------------------------------------8899877899997299989999997
Q 002751          543 -------------------------------------------------------DARGRTALHWASYFGREETVIMLVK  567 (885)
Q Consensus       543 -------------------------------------------------------D~~G~TpLH~Aa~~G~~eiV~~LL~  567 (885)
                                                                             +..|.||||+|+..|+.++++.|+.
T Consensus       141 ~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~  220 (291)
T d1s70b_         141 TPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ  220 (291)
T ss_dssp             CHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred             CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCC
T ss_conf             42222111222000100000246532110000133322110011012321100246789873048887699544101344


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             499999877999999999939999981691989999997277988767865667430679999659999999981
Q 002751          568 LGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQI  642 (885)
Q Consensus       568 ~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~g~~~~Ve~Lle~  642 (885)
                      .|++++..+      ..|+||||+|+..|+.+++++|+++|     ++++.+|.. |.||.+++..++++.|.+.
T Consensus       221 ~g~din~~~------~~g~TpL~~A~~~g~~~iv~lLl~~G-----adv~~~d~~-G~TaL~~A~e~~~~~L~~~  283 (291)
T d1s70b_         221 ARYDVNIKD------YDGWTPLHAAAHWGKEEACRILVENL-----CDMEAVNKV-GQTAFDVADEDILGYLEEL  283 (291)
T ss_dssp             TTCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCTTTSCCSGGGHHHHHH
T ss_pred             CEECCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHHHHHHHHHHH
T ss_conf             101124212------57988999999859899999999879-----999886899-9999999999899999998

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.67  E-value=2.3e-19  Score=147.43  Aligned_cols=132  Identities=14%  Similarity=0.076  Sum_probs=101.1

Q ss_pred             CCCCCCCCCCHHHHHHHCCCHHHHHH---HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             98448999968999998199223799---885899998568899877899997299989999997499999877999999
Q 002751          506 PNVIDDGGQGVVHLAAALGYEWAMRP---IIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAF  582 (885)
Q Consensus       506 in~~D~~G~TpLHlAA~~G~~~iV~~---LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d  582 (885)
                      ++.++..|.|+||+||..|+.+++++   |+..|+++|.+|..|+||||+||..||.++|++|++.|++++..+.    +
T Consensus        83 ~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~----~  158 (346)
T d2ajaa1          83 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI----Q  158 (346)
T ss_dssp             HHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHH----S
T ss_pred             HHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC----C
T ss_conf             876367888499999985998899999999838985533689999799999987899999999986997021455----5


Q ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHHHHHHHCCC
Q ss_conf             99993999998169198999999727798876786566743067----999965999999998198
Q 002751          583 PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNV----AAALAAEKANETAAQIGV  644 (885)
Q Consensus       583 ~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~t----Aa~~g~~~~Ve~Lle~~a  644 (885)
                      ..|.||||+|+.+||.+++++|++.|++..  +.+..+.. +.+    |+..|+.++|+.|++.++
T Consensus       159 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~--~~~~~~~~-~~t~l~~A~~~g~~~iv~~Ll~~ga  221 (346)
T d2ajaa1         159 AENYHAFRLAAENGHLHVLNRLCELAPTEA--TAMIQAEN-YYAFRWAAVGRGHHNVINFLLDCPV  221 (346)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHSCGGGH--HHHHHHHH-HHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCCC-CCCHHHHHHHCCHHHHHHHHHHCCC
T ss_conf             699874389988756799999997699420--12001689-9631157762488999999996899

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.3e-16  Score=126.80  Aligned_cols=118  Identities=19%  Similarity=0.228  Sum_probs=100.2

Q ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             99968999998199223799885899998568899877899997299989999997499999877999999999939999
Q 002751          512 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADL  591 (885)
Q Consensus       512 ~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhl  591 (885)
                      .+.++||+|+..|+.+++++|+++|+++|.+|..|+||||+|+ .|+.+++++|++.|++++..+.     ..+.||||+
T Consensus         2 p~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~-----~~~~~~L~~   75 (125)
T d1bi7b_           2 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP-----ATLTRPVHD   75 (125)
T ss_dssp             CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT-----TTCCCHHHH
T ss_pred             CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCC
T ss_conf             8705999999877999999999859741332221222222222-2222222212222222222222-----222222222


Q ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH----HHHHHHHHHHHHHH
Q ss_conf             981691989999997277988767865667430679----99965999999998
Q 002751          592 ASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAEKANETAAQ  641 (885)
Q Consensus       592 Aa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tA----a~~g~~~~Ve~Lle  641 (885)
                      |+..|+.+++++|++.|     .+++.++.. |.+|    +..++.++++.|++
T Consensus        76 A~~~g~~~~v~~Ll~~g-----a~~~~~d~~-G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          76 AAREGFLDTLVVLHRAG-----ARLDVRDAW-GRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHTCHHHHHHHHHHT-----CCSSCCCTT-CCCHHHHHHHHTCHHHHHHHSS
T ss_pred             CCCCCCCCCCCCCCCCC-----CCCCCCCCC-CCCHHHHHHHCCCHHHHHHHHH
T ss_conf             22322222222221222-----223324578-9899999998687999999995

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.65  E-value=5.6e-17  Score=131.03  Aligned_cols=103  Identities=26%  Similarity=0.220  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf             99999599999999995999998448999968999998199223799885899998568899877899997299989999
Q 002751          485 NLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIM  564 (885)
Q Consensus       485 ~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~  564 (885)
                      .++... ..-+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++
T Consensus         8 ~A~~~g-~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~~v~~   86 (118)
T d1myoa_           8 WALKNG-DLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKL   86 (118)
T ss_dssp             HHHHTT-CHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCHHHHH
T ss_pred             HHHHCC-CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCHHHHHH
T ss_conf             999877-9999999998420122322222222222222222222222334320233101233210223320473243243


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             997499999877999999999939999981
Q 002751          565 LVKLGAAPGAVEDPTPAFPGGQTAADLASS  594 (885)
Q Consensus       565 LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~  594 (885)
                      |++.|++++..+      ..|.||||+|..
T Consensus        87 Ll~~Gad~~~~d------~~G~t~l~~a~~  110 (118)
T d1myoa_          87 LLSKGADKTVKG------PDGLTALEATDN  110 (118)
T ss_dssp             HHTTCCCSSSSS------SSTCCCCCTCSS
T ss_pred             HHCCCCCCEEEC------CCCCCHHHHHHH
T ss_conf             310200000038------999999999868

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.3e-14  Score=114.72  Aligned_cols=91  Identities=27%  Similarity=0.310  Sum_probs=68.9

Q ss_pred             CCCCHHHHHHHCCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9996899999819922379988----589999856889987789999729998999999749999987799999999993
Q 002751          512 GGQGVVHLAAALGYEWAMRPII----ATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQT  587 (885)
Q Consensus       512 ~G~TpLHlAA~~G~~~iV~~LL----~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~T  587 (885)
                      +|.||||+||..|+.++++.|+    ..|+++|.+|..|+||||+|+..|+.+++++|++.|++.+...      ..|.+
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~------~~~~~   75 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD------RHGQT   75 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSCC
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCC------CCCCC
T ss_conf             884299999983999999999998997799777668999962410001355333333322222334333------32223


Q ss_pred             HHHHHHHCCCHHHHHHHHHCC
Q ss_conf             999998169198999999727
Q 002751          588 AADLASSRGHKGIAGYLAEAD  608 (885)
Q Consensus       588 PLhlAa~~Gh~eiv~lLle~G  608 (885)
                      +++.|...++..+++.+....
T Consensus        76 ~~~~a~~~~~~~~~~~~~~~~   96 (228)
T d1k1aa_          76 AAHLACEHRSPTCLRALLDSA   96 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCHHHHHHCC
T ss_conf             332222234521002344204

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.64  E-value=1.5e-18  Score=141.92  Aligned_cols=138  Identities=12%  Similarity=0.064  Sum_probs=106.5

Q ss_pred             CCCCHHHHHHHHHH---HHH---HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC--CCCC
Q ss_conf             62577779999995---999---999999959999984489999689999981992237998858999985688--9987
Q 002751          477 NSRDKLIQNLLRNR---LCE---WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA--RGRT  548 (885)
Q Consensus       477 n~~d~l~~~aL~~~---l~e---~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~--~G~T  548 (885)
                      +.++..++++|...   .+.   -+++.|+..|+++|..|..|+||||+||..|+.++|++|++.|++++..+.  .|+|
T Consensus        84 ~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t  163 (346)
T d2ajaa1          84 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYH  163 (346)
T ss_dssp             HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHH
T ss_pred             HHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             76367888499999985998899999999838985533689999799999987899999999986997021455569987


Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             789999729998999999749999987799999999993999998169198999999727798876786
Q 002751          549 ALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLT  617 (885)
Q Consensus       549 pLH~Aa~~G~~eiV~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln  617 (885)
                      |||+||..||.++|++|++.|+++...+   ..+.+|.||++.|+.+||.+++++|++.|++....+..
T Consensus       164 ~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~---~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~  229 (346)
T d2ajaa1         164 AFRLAAENGHLHVLNRLCELAPTEATAM---IQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIH  229 (346)
T ss_dssp             HHHHHHHTTCHHHHHHHHHSCGGGHHHH---HHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
T ss_conf             4389988756799999997699420120---01689963115776248899999999689986637799

>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: Calmodulin binding transcription activator 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6e-16  Score=123.95  Aligned_cols=81  Identities=35%  Similarity=0.780  Sum_probs=73.9

Q ss_pred             EEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEEEEECCCCCCCCEEEEEEECCCCCCCC
Q ss_conf             79760688778997389998568888777999855995199213306654474885348999820369999089744454
Q 002751          309 IRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACSE  388 (885)
Q Consensus       309 I~d~sP~w~~~~GgtKVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~pG~V~l~Vt~~n~~~~Se  388 (885)
                      |++|+|.||+..|||+|+|.|.+|..     ...+.|+||+..+++.+++++.++|.+|||.+|.|+|.|+.+++.. +.
T Consensus         2 It~isP~~G~~~GGt~V~I~G~~f~~-----~~~~~c~fG~~~~~~~~vs~~~i~C~tP~~~~G~v~v~Vs~ng~~~-s~   75 (82)
T d2cxka1           2 VTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQII-SN   75 (82)
T ss_dssp             CCEEECSEECTTCCCEEEEESSCCCC-----SSCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEEC-SC
T ss_pred             EEEECCCCEECCCCEEEEEEECCCCC-----CCEEEEEEEEEECCEEEEEEEEEEEECCCCCCEEEEEEEEECCEEE-CC
T ss_conf             93981896608999999999736664-----4507999972003059971259999847535615899999899981-36


Q ss_pred             CEEEECC
Q ss_conf             2000103
Q 002751          389 VREFEYR  395 (885)
Q Consensus       389 v~~FeYr  395 (885)
                      ...||||
T Consensus        76 ~~~F~Yr   82 (82)
T d2cxka1          76 SVVFEYK   82 (82)
T ss_dssp             CEEEEEC
T ss_pred             CCEEEEC
T ss_conf             7088859

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=2.7e-14  Score=112.57  Aligned_cols=143  Identities=24%  Similarity=0.205  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             79999995999999999959999984489999689999981992237998858999985688998778999972999899
Q 002751          483 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV  562 (885)
Q Consensus       483 ~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV  562 (885)
                      ++.+.... ..-+++.|++.|++++ .|..|+||||+|+..++..++..++.........+..+.+++++++...+.+++
T Consensus         6 L~~Aa~~g-~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (153)
T d1awcb_           6 LLEAARAG-QDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIV   83 (153)
T ss_dssp             HHHHHHHT-CHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred             HHHHHHCC-CHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf             99999878-9999999998699834-244787533343232222222222222222221222233323222233110122


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHH
Q ss_conf             999974999998779999999999399999816919899999972779887678656674306799996----5999999
Q 002751          563 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----AEKANET  638 (885)
Q Consensus       563 ~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~g----~~~~Ve~  638 (885)
                      ++|+..|++++.++      ..|.||||+|+..|+.+++++|++.|     ++++.++.. |.+|.+.+    +.++++.
T Consensus        84 ~~l~~~~~~~~~~~------~~g~T~L~~A~~~g~~~iv~~ll~~g-----ad~~~~d~~-g~Tpl~~A~~~g~~eiv~l  151 (153)
T d1awcb_          84 EVLLKHGADVNAKD------MLKMTALHWATEHNHQEVVELLIKYG-----ADVHTQSKF-CKTAFDISIDNGNEDLAEI  151 (153)
T ss_dssp             HHHHTTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHHHHHH
T ss_pred             ECCCCCCCCCCCCC------CCCCHHHHHHHHCCHHHEEEECCCCC-----CCCCCCCCC-CCCHHHHHHHCCCHHHHHH
T ss_conf             12224687612322------46734777664302224123114344-----677266898-9999999998599999986


Q ss_pred             H
Q ss_conf             9
Q 002751          639 A  639 (885)
Q Consensus       639 L  639 (885)
                      |
T Consensus       152 L  152 (153)
T d1awcb_         152 L  152 (153)
T ss_dssp             H
T ss_pred             C
T ss_conf             7

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=2e-15  Score=120.32  Aligned_cols=108  Identities=23%  Similarity=0.286  Sum_probs=66.3

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCC
Q ss_conf             9999999599999844899996899999819922379988589-9998568899877899997299989999997-4999
Q 002751          494 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGREETVIMLVK-LGAA  571 (885)
Q Consensus       494 ~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~G-adin~~D~~G~TpLH~Aa~~G~~eiV~~LL~-~GAd  571 (885)
                      .++..+++.|..++..|..|.||||+|+..|+..+++.|+..+ .+++.+|..|+||||+|+..|+.+++++|++ .|++
T Consensus       119 ~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad  198 (229)
T d1ixva_         119 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE  198 (229)
T ss_dssp             HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCC
T ss_conf             43222211002321247889973502321245332333322222222235666678102210125199999999965999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             998779999999999399999816919899999972779
Q 002751          572 PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLS  610 (885)
Q Consensus       572 ~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~  610 (885)
                      ++.++      ..|+||||+|+.   .+++++|+++|+|
T Consensus       199 ~~~~d------~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         199 YDLVD------NKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             SCCCC------TTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             CCCCC------CCCCCHHHHHHH---HHHHHHHHHCCCC
T ss_conf             88858------999999999846---7899999976999

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=5.8e-15  Score=117.15  Aligned_cols=131  Identities=24%  Similarity=0.284  Sum_probs=91.6

Q ss_pred             CCCCCCCCCHHHHHHHHHH--HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf             6999862577779999995--99999999995999998448999968999998199223799885899998568899877
Q 002751          472 EGDCPNSRDKLIQNLLRNR--LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTA  549 (885)
Q Consensus       472 ~~~~in~~d~l~~~aL~~~--l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~Tp  549 (885)
                      .|.+++.+|..+.++|...  ....+++.|++.|++++..+..|.++|+.++..++...+..|+..+.+++..|..|.+|
T Consensus        23 ~g~d~n~~d~~g~TpL~~A~~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  102 (156)
T d1ihba_          23 NNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLP  102 (156)
T ss_dssp             SCCCTTCCCTTSCCHHHHCCSSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             78796746774453212222222222222222222221212357532223322222222222211222222356443211


Q ss_pred             HHHHHHCCCHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf             899997299989999997499-99987799999999993999998169198999999727
Q 002751          550 LHWASYFGREETVIMLVKLGA-APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD  608 (885)
Q Consensus       550 LH~Aa~~G~~eiV~~LL~~GA-d~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lLle~G  608 (885)
                      ||+|+..++.+++++|+..++ +.+..+      ..|.||||+|+.+|+.+++++|+++|
T Consensus       103 l~~a~~~~~~~~~~~Ll~~~~~~~~~~d------~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         103 LHLAAKEGHLRVVEFLVKHTASNVGHRN------HKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHTTCHHHHHHHHHHSCCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf             2233332212222222212201122458------99989999999839899999999667

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=3.5e-14  Score=111.78  Aligned_cols=116  Identities=22%  Similarity=0.244  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             77999999599999999995999998448999968999998199223799885899998568899877899997299989
Q 002751          482 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREET  561 (885)
Q Consensus       482 l~~~aL~~~l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ei  561 (885)
                      .++.+..... ..++..++......+..+..+.++++.++...+...++.++..|++++.+|..|+||||+||..|+.++
T Consensus        37 ~L~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~i  115 (153)
T d1awcb_          37 PLHLAAQYGH-FSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV  115 (153)
T ss_dssp             HHHHHHHHTC-HHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHE
T ss_conf             3334323222-222222222222222122223332322223311012212224687612322467347776643022241


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             9999974999998779999999999399999816919899999
Q 002751          562 VIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL  604 (885)
Q Consensus       562 V~~LL~~GAd~~~~~d~~~~d~~G~TPLhlAa~~Gh~eiv~lL  604 (885)
                      +++|++.|++++..+      ..|.||||+|+.+|+.+++++|
T Consensus       116 v~~ll~~gad~~~~d------~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         116 VELLIKYGADVHTQS------KFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHH
T ss_pred             EEECCCCCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHC
T ss_conf             231143446772668------9899999999985999999867

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.55  E-value=5.5e-15  Score=117.33  Aligned_cols=153  Identities=15%  Similarity=0.040  Sum_probs=105.1

Q ss_pred             CCCCCCC-CHHHHHHHHHH---HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH---HHHHHHHHC-CCCCCCCCC
Q ss_conf             9998625-77779999995---999999999959999984489999689999981992---237998858-999985688
Q 002751          473 GDCPNSR-DKLIQNLLRNR---LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYE---WAMRPIIAT-GVSPNFRDA  544 (885)
Q Consensus       473 ~~~in~~-d~l~~~aL~~~---l~e~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~---~iV~~LL~~-Gadin~~D~  544 (885)
                      +.++|.. |..+.++|+..   ...-+++.|++.|++++.+|..|+||||+|+..++.   ..+..++.. ...++.+|.
T Consensus        96 ~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~  175 (301)
T d1sw6a_          96 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS  175 (301)
T ss_dssp             CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT
T ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             87868686899988899999867999999999878997767764351777742202202466699999997645551345


Q ss_pred             CCCCHHHHHHHCCC----HH--------HHHHHHHCCCCCCCC-------------------------------CCCCCC
Q ss_conf             99877899997299----98--------999999749999987-------------------------------799999
Q 002751          545 RGRTALHWASYFGR----EE--------TVIMLVKLGAAPGAV-------------------------------EDPTPA  581 (885)
Q Consensus       545 ~G~TpLH~Aa~~G~----~e--------iV~~LL~~GAd~~~~-------------------------------~d~~~~  581 (885)
                      .|+||||+++..+.    ..        ++..++..+......                               ..++.+
T Consensus       176 ~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~  255 (301)
T d1sw6a_         176 MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQ  255 (301)
T ss_dssp             TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCC
T ss_pred             CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf             32778799999837554189999989999999986587200002456640468988601488999986677886076687


Q ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             99999399999816919899999972779887678656674306799996
Q 002751          582 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA  631 (885)
Q Consensus       582 d~~G~TPLhlAa~~Gh~eiv~lLle~Ga~~~l~dln~kd~~~g~tAa~~g  631 (885)
                      |..|+||||+|+..|+.+++++|++.|     ++++++++. |.+|.+.+
T Consensus       256 D~~G~TpLh~A~~~g~~~iv~~Ll~~G-----Ad~~~~n~~-G~Tpl~~A  299 (301)
T d1sw6a_         256 DSNGDTCLNIAARLGNISIVDALLDYG-----ADPFIANKS-GLRPVDFG  299 (301)
T ss_dssp             CTTSCCHHHHHHHHCCHHHHHHHHHTT-----CCTTCCCTT-SCCGGGGT
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHC
T ss_conf             899988999999868799999999879-----999998999-99999973

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=2.2e-13  Score=106.35  Aligned_cols=79  Identities=13%  Similarity=0.119  Sum_probs=54.9

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf             9999999599999844899996899999819922379988589999856889987789999729998999999749999
Q 002751          494 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAP  572 (885)
Q Consensus       494 ~Lv~~Lle~Gadin~~D~~G~TpLHlAA~~G~~~iV~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~  572 (885)
                      .+++.|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.++..
T Consensus        62 ~iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~  140 (154)
T d1dcqa1          62 HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR  140 (154)
T ss_dssp             HHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCC
T ss_conf             9999999749973331312101000111123333221221357550244789999999999939999999999938897

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.27  E-value=3.5e-12  Score=98.01  Aligned_cols=112  Identities=20%  Similarity=0.215  Sum_probs=84.4

Q ss_pred             HHHHHCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCC-----CCHHHHHHHHHHHHCCCCC--CCHHH------
Q ss_conf             0232002102455--3234689999999985434453410258-----7167899999983001224--20344------
Q 002751          651 AEQLSLRGSLAAV--RKSAHAAALIQQAFRVRSFRHRQSIQSS-----DDVSEVSVDLVALGSLNKV--SKMIH------  715 (885)
Q Consensus       651 ~dqLslkdsLaAv--R~A~~aar~IQ~~FR~~s~R~r~L~~~~-----~d~~e~~~~ila~~~~~k~--~~~~~------  715 (885)
                      ..|+..-..++++  |++|||.+..+.+|.   .||+.|....     .+.++.|..++.. ..+..  ++-|.      
T Consensus       640 ~~QLr~~Gvle~vrirr~Gyp~R~~f~eF~---~ry~~L~~~~~~~~~~~~k~~~~~il~~-~~~~~~~~qiGkTkVFlr  715 (789)
T d1kk8a2         640 LHQLQCNGVLEGIRICRKGFPSRLIYSEFK---QRYSILAPNAIPQGFVDGKTVSEKILAG-LQMDPAEYRLGTTKVFFK  715 (789)
T ss_dssp             HHHHTTSSSCC-----CCCSCEEEEHHHHH---HHHGGGSGGGCCC---CHHHHHHHHHHH-HTCCGGGEEECSSEEEEC
T ss_pred             HHHHHHHCHHHHHHHHHCCCCCCCCHHHHH---HHHHHHCCCCCCCCCCCHHHHHHHHHHH-CCCCHHHEEECCCEEEEC
T ss_conf             999986264999999975787405499999---9998768340015678889999999996-698812088438879977


Q ss_pred             ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             ----------788999999999999644699999999998---999999978669999999999
Q 002751          716 ----------FEDYLHFAAIKIQQKYRGWKGRKDFLKIRN---HIVKLQAHVRGHQVRKQYKKV  766 (885)
Q Consensus       716 ----------~~~~~~~AAi~IQk~~Rgw~~RK~fl~~R~---~vI~IQa~~RG~~aRk~yk~l  766 (885)
                                ++..+..+|+.||+.||||++||.|+++|.   ++++||++||++++||+|+..
T Consensus       716 ~~~~~~LE~~r~~~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~~~  779 (789)
T d1kk8a2         716 AGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWW  779 (789)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf             6199999999999999999999999999999999999999999999999999999998036999

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=99.23  E-value=4.2e-12  Score=97.53  Aligned_cols=112  Identities=21%  Similarity=0.223  Sum_probs=83.8

Q ss_pred             HHHHHCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCHHHHHHHHHHHHCCCCC--CCHHH-----
Q ss_conf             0232002102455--3234689999999985434453410258------7167899999983001224--20344-----
Q 002751          651 AEQLSLRGSLAAV--RKSAHAAALIQQAFRVRSFRHRQSIQSS------DDVSEVSVDLVALGSLNKV--SKMIH-----  715 (885)
Q Consensus       651 ~dqLslkdsLaAv--R~A~~aar~IQ~~FR~~s~R~r~L~~~~------~d~~e~~~~ila~~~~~k~--~~~~~-----  715 (885)
                      ..|+..-+.+++|  |+.|||.+..+.+|.   .||+.|....      .+.++.|..++.. ..+..  ++-|.     
T Consensus       643 ~~QLr~~GvLE~vri~r~Gyp~R~~~~eF~---~RY~~L~~~~~~~~~~~d~~~~~~~ll~~-~~~~~~~~~iGkTKVFl  718 (794)
T d2mysa2         643 LHQLRCNGVLEGIRICRKGFPSRVLYADFK---QRYRVLNASAIPEGQFMDSKKASEKLLGG-GDVDHTQYAFGHTKVFF  718 (794)
T ss_dssp             HHHHHHHSHHHHHHHHTTSCCCEEEHHHHH---HHHGGGTTTC------CCTTHHHHHHTTS-SSCCSSSEEEETTEEEE
T ss_pred             HHHHHHCCHHHHHHHHHCCCCCCCCHHHHH---HHHHHHCCCCCCCCCCCCHHHHHHHHHHH-CCCCCCCEEECCCEEEE
T ss_conf             999986278999999966898636499999---99998583424455668999999999996-69781358717975986


Q ss_pred             -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -----------7889999999999996446999999999---98999999978669999999999
Q 002751          716 -----------FEDYLHFAAIKIQQKYRGWKGRKDFLKI---RNHIVKLQAHVRGHQVRKQYKKV  766 (885)
Q Consensus       716 -----------~~~~~~~AAi~IQk~~Rgw~~RK~fl~~---R~~vI~IQa~~RG~~aRk~yk~l  766 (885)
                                 ++..+..+|+.||+.||||++||.|+++   |+++++||++|||+++||.|..+
T Consensus       719 r~~~~~~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~~~  783 (794)
T d2mysa2         719 KAGLLGLLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWM  783 (794)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf             74399999999999999999999999999999999999999999999999999999998236999

>d1qhoa1 b.1.18.2 (A:496-576) Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.73  E-value=3.5e-08  Score=70.53  Aligned_cols=77  Identities=25%  Similarity=0.299  Sum_probs=65.1

Q ss_pred             EEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEEEEECCCCCCCCEEEEEEECCCCCC
Q ss_conf             18797606887789973899985688887779998559951992133066544748853489998203699990897444
Q 002751          307 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLAC  386 (885)
Q Consensus       307 f~I~d~sP~w~~~~GgtKVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~pG~V~l~Vt~~n~~~~  386 (885)
                      +.|+.++|..|+  +|+.|+|.|.+|.+      ....|.||+.+.....|++..|+|.+|++.+|.+++.|+.++..  
T Consensus         4 P~I~si~P~~g~--~Gt~VtI~G~~F~~------~~~~v~~g~~~~~v~~~s~t~I~c~vP~~~~g~~~v~V~~~g~~--   73 (81)
T d1qhoa1           4 PQIGSVAPNMGI--PGNVVTIDGKGFGT------TQGTVTFGGVTATVKSWTSNRIEVYVPNMAAGLTDVKVTAGGVS--   73 (81)
T ss_dssp             CEEEEEESSEEC--TTCEEEEEEECCCS------SCCEEEETTEECCEEEECSSEEEEECCSCCCEEEEEEEEETTEE--
T ss_pred             CEEEEEECCCCC--CCCEEEEEEECCCC------CCEEEEECCEEEEEEEECCCEEEEEECCCCCCEEEEEEEECCEE--
T ss_conf             999389799779--99899999989989------97589979988899997899799990799993489999979998--


Q ss_pred             CCCEEEE
Q ss_conf             5420001
Q 002751          387 SEVREFE  393 (885)
Q Consensus       387 Sev~~Fe  393 (885)
                      |....|+
T Consensus        74 s~~~~F~   80 (81)
T d1qhoa1          74 SNLYSYN   80 (81)
T ss_dssp             CCCEEEE
T ss_pred             CCCEEEE
T ss_conf             5668769

>d1p7hl1 b.1.18.1 (L:576-678) T-cell transcription factor NFAT1 (NFATC2) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: T-cell transcription factor NFAT1 (NFATC2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=8.7e-08  Score=67.82  Aligned_cols=84  Identities=14%  Similarity=0.212  Sum_probs=63.7

Q ss_pred             CCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCC-EEEE-----------ECCEEEEECCC-CCC
Q ss_conf             7518797606887789973899985688887779998559951992133-0665-----------44748853489-998
Q 002751          305 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVP-AEVL-----------TDNVIRCQAPS-HAA  371 (885)
Q Consensus       305 q~f~I~d~sP~w~~~~GgtKVlI~G~f~~~~~~~~~~~~~c~FGd~~Vp-ae~v-----------~~gvLrC~~Pp-h~p  371 (885)
                      +++.|+++||..|+..||++|+|+|..+.      + +..|.||+.... ..+|           +...|+|.+|| +.+
T Consensus         1 ~~P~I~~~s~~sgpv~GG~ev~llg~~f~------~-~~~V~F~e~~~~~~~~We~~~~~~~~v~~q~aIv~~tPpy~~~   73 (103)
T d1p7hl1           1 ELPMVERQDTDSCLVYGGQQMILTGQNFT------S-ESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEIPEYRNK   73 (103)
T ss_dssp             CCCEEEEESCSEEETTCCCEEEEEEESCC------S-SCEEEEEEECSSSCEEEEEEECBCTTTCBTTEEEEECCCCSCT
T ss_pred             CCCEEEEECCCCCCCCCCCEEEEEECCCC------C-CCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCC
T ss_conf             99869998699730489838999966638------9-8789987107886287899631381016100799977998799


Q ss_pred             C---CEEEEEE--ECCCCCCCCCEEEECCC
Q ss_conf             2---0369999--08974445420001035
Q 002751          372 G---RVPFYIT--GSNRLACSEVREFEYRE  396 (885)
Q Consensus       372 G---~V~l~Vt--~~n~~~~Sev~~FeYr~  396 (885)
                      +   .|.|+|.  .+++ .+|+...|+|..
T Consensus        74 ~i~~pV~V~v~l~~s~~-~~S~~~~FtY~P  102 (103)
T d1p7hl1          74 HIRTPVKVNFYVINGKR-KRSQPQHFTYHP  102 (103)
T ss_dssp             TCSSCEEEEEEEEETTT-EECCCEEEEEEC
T ss_pred             CCCCCEEEEEEEECCCC-CCCCCCCEEEEE
T ss_conf             87525799999982998-306987879960

>d1uadc_ b.1.18.18 (C:) Exocyst complex component Sec5, Ral-binding domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Other IPT/TIG domains
domain: Exocyst complex component Sec5, Ral-binding domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=2.6e-07  Score=64.51  Aligned_cols=87  Identities=20%  Similarity=0.152  Sum_probs=67.7

Q ss_pred             CEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCC--CCCEEEEECCEEEEECCCCCCCCEEEEEEECCC
Q ss_conf             518797606887789973899985688887779998559951992--133066544748853489998203699990897
Q 002751          306 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--EVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNR  383 (885)
Q Consensus       306 ~f~I~d~sP~w~~~~GgtKVlI~G~f~~~~~~~~~~~~~c~FGd~--~Vpae~v~~gvLrC~~Pph~pG~V~l~Vt~~n~  383 (885)
                      -..|+.|+|..|+  |||.|+|.|.+|....   ..-..+.+|..  .+...++.+..++|.+||+.+|.+++.|...++
T Consensus         4 PP~ItsisP~~G~--gGT~VTI~G~~f~~~~---s~~~~V~v~g~~~~~~~~~~s~~~I~c~tp~~~~g~~~v~v~~~~g   78 (92)
T d1uadc_           4 PPLVTGISPNEGI--PWTKVTIRGENLGTGP---TDLIGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKSG   78 (92)
T ss_dssp             CCEEEEEESSEES--TTCEEEEEEECSCSSG---GGEEEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEETTT
T ss_pred             CCEEEEEECCCCC--CCCEEEEEEECCCCCC---CCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCC
T ss_conf             9997699599789--9959999997878987---7534899906435887602786199997689888521899999299


Q ss_pred             CCCCCCEEEECCCC
Q ss_conf             44454200010358
Q 002751          384 LACSEVREFEYREK  397 (885)
Q Consensus       384 ~~~Sev~~FeYr~~  397 (885)
                      -..+....|+|.++
T Consensus        79 ~~~ts~~~F~y~~P   92 (92)
T d1uadc_          79 GRGTSTVSFKLLKP   92 (92)
T ss_dssp             EECEESSCCEECCC
T ss_pred             CEEEECCEEEEECC
T ss_conf             86998188997295

>d1cxla1 b.1.18.2 (A:497-583) Cyclomaltodextrin glycanotransferase, domain D {Bacillus circulans, different strains [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Cyclomaltodextrin glycanotransferase, domain D
species: Bacillus circulans, different strains [TaxId: 1397]

Probab=98.51  E-value=3.4e-07  Score=63.74  Aligned_cols=81  Identities=22%  Similarity=0.263  Sum_probs=65.0

Q ss_pred             EEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCC-CCCEE--EEECCEEEEECCCCCCCCEEEEEEECCC
Q ss_conf             18797606887789973899985688887779998559951992-13306--6544748853489998203699990897
Q 002751          307 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAE--VLTDNVIRCQAPSHAAGRVPFYITGSNR  383 (885)
Q Consensus       307 f~I~d~sP~w~~~~GgtKVlI~G~f~~~~~~~~~~~~~c~FGd~-~Vpae--~v~~gvLrC~~Pph~pG~V~l~Vt~~n~  383 (885)
                      +.|+.++|.+|+  +|++|+|.|..|.+      ..-.+.||.. ..+++  .|.+..++|.+|++.+|.+++.|...++
T Consensus         3 P~I~sisP~~g~--~Gt~VTI~G~~F~~------~~~~V~v~~~~~~~~~v~s~s~t~I~~~vP~~~~g~~~v~V~~~~g   74 (87)
T d1cxla1           3 PTIGHVGPMMAK--PGVTITIDGRGFGS------SKGTVYFGTTAVSGADITSWEDTQIKVKIPAVAGGNYNIKVANAAG   74 (87)
T ss_dssp             CEEEEEECSEEC--TTCEEEEEEECCCS------SCCEEEETTEEEEGGGEEEEETTEEEEECCCCCSEEEEEEEECTTC
T ss_pred             CEEEEEECCCCC--CCCEEEEEEECCCC------CCCEEEEEEECCCEEEEEEECCCEEEEEECCCCCCEEEEEEEECCC
T ss_conf             999798489789--99899999899789------9855999613572799999689999999789998207999996999


Q ss_pred             CCCCCCEEEECC
Q ss_conf             444542000103
Q 002751          384 LACSEVREFEYR  395 (885)
Q Consensus       384 ~~~Sev~~FeYr  395 (885)
                      ..+.....|+|.
T Consensus        75 ~~s~~~~~F~~l   86 (87)
T d1cxla1          75 TASNVYDNFEVL   86 (87)
T ss_dssp             CBCCCEEEEEEC
T ss_pred             CEEEECCCEEEE
T ss_conf             378003766990

>d3bmva1 b.1.18.2 (A:496-578) Cyclomaltodextrin glycanotransferase, domain D {Thermoanaerobacterium [TaxId: 28895]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Cyclomaltodextrin glycanotransferase, domain D
species: Thermoanaerobacterium [TaxId: 28895]

Probab=98.43  E-value=9.9e-07  Score=60.55  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=66.8

Q ss_pred             CEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEEEEECCCCCCCCEEEEEEECCCCC
Q ss_conf             51879760688778997389998568888777999855995199213306654474885348999820369999089744
Q 002751          306 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLA  385 (885)
Q Consensus       306 ~f~I~d~sP~w~~~~GgtKVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~pG~V~l~Vt~~n~~~  385 (885)
                      .+.|+.++|..|+.  |++|+|.|..|.+      ..-.|.||+.++....|.+..++|.+|++.+|.+++.|...++..
T Consensus         3 tP~I~sisP~~g~~--Gt~VtI~G~~F~~------~~~~V~ig~~~~~v~~~s~t~I~~~vP~~~~g~~~v~V~~~~g~~   74 (83)
T d3bmva1           3 SPLIGHVGPTMTKA--GQTITIDGRGFGT------TSGQVLFGSTAGTIVSWDDTEVKVKVPSVTPGKYNISLKTSSGAT   74 (83)
T ss_dssp             CCEEEEEECSEECT--TCEEEEEEECCCS------SCCEEEETTEECEEEEECSSEEEEECCCCCSEEEEEEEECTTCCB
T ss_pred             CCEEEEEECCCCCC--CCEEEEEECCCCC------CCCEEEECCEEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCE
T ss_conf             99995896998799--9799999637888------863589999999999979999999938999804889999599869


Q ss_pred             CCCCEEEE
Q ss_conf             45420001
Q 002751          386 CSEVREFE  393 (885)
Q Consensus       386 ~Sev~~Fe  393 (885)
                      ......|+
T Consensus        75 s~~~~~F~   82 (83)
T d3bmva1          75 SNTYNNIN   82 (83)
T ss_dssp             CCCEEEEE
T ss_pred             ECCCCCEE
T ss_conf             12315459

>d1cyga1 b.1.18.2 (A:492-574) Cyclomaltodextrin glycanotransferase, domain D {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Cyclomaltodextrin glycanotransferase, domain D
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.40  E-value=1.3e-06  Score=59.75  Aligned_cols=80  Identities=20%  Similarity=0.232  Sum_probs=66.0

Q ss_pred             CEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEEEEECCCCCCCCEEEEEEECCCCC
Q ss_conf             51879760688778997389998568888777999855995199213306654474885348999820369999089744
Q 002751          306 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLA  385 (885)
Q Consensus       306 ~f~I~d~sP~w~~~~GgtKVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~pG~V~l~Vt~~n~~~  385 (885)
                      .+.|+.++|.-|.  +|++|+|.|..|..     . .-.|.||+.+.....|.+..++|.+|++.+|.+++.|...++..
T Consensus         3 tP~I~sisP~~g~--~Gt~VtI~G~~F~~-----~-~~~V~ig~~~~~v~~~s~t~I~~~vP~~~~G~~~V~V~~~~g~~   74 (83)
T d1cyga1           3 TPIIGHVGPMMGQ--VGHQVTIDGEGFGT-----N-TGTVKFGTTAANVVSWSNNQIVVAVPNVSPGKYNITVQSSSGQT   74 (83)
T ss_dssp             SCEEEEEECSEEC--TTCEEEEEEECCCS-----S-CCEEEETTEECCEEECCSSEEEEECCSCCSEEEEEEEECTTSCB
T ss_pred             CCEEEEEECCCCC--CCCEEEEEECCCCC-----C-CCEEEECCEEEEEEEECCCEEEEEEECCCCCCEEEEEEECCCCE
T ss_conf             8889899899789--99799999744479-----8-63899999898899967999999996788950999999899838


Q ss_pred             CCCCEEEE
Q ss_conf             45420001
Q 002751          386 CSEVREFE  393 (885)
Q Consensus       386 ~Sev~~Fe  393 (885)
                      ......|+
T Consensus        75 s~~~~~F~   82 (83)
T d1cyga1          75 SAAYDNFE   82 (83)
T ss_dssp             CCCEEEEE
T ss_pred             EECCCCEE
T ss_conf             81116559

>d3brda1 b.1.18.1 (A:542-660) DNA-binding protein LAG-1 (CSL) {Caenorhabditis elegans [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: DNA-binding protein LAG-1 (CSL)
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.39  E-value=4.1e-07  Score=63.15  Aligned_cols=83  Identities=16%  Similarity=0.270  Sum_probs=69.9

Q ss_pred             CCCEEEEEEECCCCCCCCCEEEEEEC-CCCCCCCCCCCCCEEEEECCCCCCEEEEECCEEEEECCCCCC-----------
Q ss_conf             77518797606887789973899985-688887779998559951992133066544748853489998-----------
Q 002751          304 EQLFSIRDFSPDWAYSGAETKVLIIG-MFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-----------  371 (885)
Q Consensus       304 ~q~f~I~d~sP~w~~~~GgtKVlI~G-~f~~~~~~~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph~p-----------  371 (885)
                      -+.+-|+.+.|+-|...|+++|+  | +|.+        ++.|+|||+++.+.+|.+.+|.|.+||..+           
T Consensus        19 tPvPvV~~L~pngG~~~~~lEvt--G~nF~~--------~L~V~FGd~~A~T~~r~~esLvC~vP~~s~~~~~~~~w~~~   88 (119)
T d3brda1          19 SPCPVVGSLEVDGHGEASRVELH--GRDFKP--------NLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFT   88 (119)
T ss_dssp             CSCCEEEEEEEECSGGGCEEEEE--EECCCT--------TEEEEETTEEECEEEEETTEEEEECCCHHHHSCTTTHHHHB
T ss_pred             CCCCEEEEEECCCCCCCCEEEEE--CCCCCC--------CCEEEECCCCCEEEEEECCEEEEECCCHHHHCCCCCCEEEE
T ss_conf             88865458702789853279998--867888--------86899899153369981787899889868825555433785


Q ss_pred             ------CCEEEEEEECCCCCCCCCEEEECCC
Q ss_conf             ------2036999908974445420001035
Q 002751          372 ------GRVPFYITGSNRLACSEVREFEYRE  396 (885)
Q Consensus       372 ------G~V~l~Vt~~n~~~~Sev~~FeYr~  396 (885)
                            ..||+.+.-.+++.-+.-..|+|..
T Consensus        89 ~~~~~~v~vPisLVR~DGvIy~t~~tfty~~  119 (119)
T d3brda1          89 NRTTGDVEVPISLVRDDGVVYSSGLTFSYKS  119 (119)
T ss_dssp             CTTTCCBEEEEEEEETTSEEEEEEEEEETTC
T ss_pred             ECCCCCCEEEEEEEECCCEEEECCCEEEECC
T ss_conf             0578760322899942886961672488239

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=98.36  E-value=1.8e-07  Score=65.63  Aligned_cols=91  Identities=24%  Similarity=0.377  Sum_probs=58.1

Q ss_pred             HHHHHCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCHHHHHHHHHHHHCCC--CCCCHHH---H----
Q ss_conf             0232002102455--323468999999998543445341025---871678999999830012--2420344---7----
Q 002751          651 AEQLSLRGSLAAV--RKSAHAAALIQQAFRVRSFRHRQSIQS---SDDVSEVSVDLVALGSLN--KVSKMIH---F----  716 (885)
Q Consensus       651 ~dqLslkdsLaAv--R~A~~aar~IQ~~FR~~s~R~r~L~~~---~~d~~e~~~~ila~~~~~--k~~~~~~---~----  716 (885)
                      ..|+..-..++++  |+.|||.+..+.+|+   .||+.|...   ..+.++.|..++.. ..+  ..++.|.   |    
T Consensus       617 ~~QLr~~GvlE~vrir~~Gyp~R~~f~eF~---~RY~~L~~~~~~~~~~k~~~~~lL~~-l~~~~~~~~iGkTkVFlr~~  692 (730)
T d1w7ja2         617 VQQLRACGVLETIRISAAGFPSRWTYQEFF---SRYRVLMKQKDVLSDRKQTCKNVLEK-LILDKDKYQFGKTKIFFRAG  692 (730)
T ss_dssp             HHHHHHTTHHHHHHHHHHSCCEEEEHHHHH---HHHGGGSCGGGCCSCHHHHHHHHHHH-HCCCGGGEEECSSEEEECTT
T ss_pred             HHHHHHHCHHHHHHHHHCCCCCCCCHHHHH---HHHHHHCCCCCCCCCHHHHHHHHHHH-CCCCCCCEEECCCEEEEECC
T ss_conf             999987467999999965898605399999---99998777777888878999999997-69994558835987998048


Q ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             ---------88999999999999644699999999998
Q 002751          717 ---------EDYLHFAAIKIQQKYRGWKGRKDFLKIRN  745 (885)
Q Consensus       717 ---------~~~~~~AAi~IQk~~Rgw~~RK~fl~~R~  745 (885)
                               +.++..+|+.||+.||||++||+|+++|+
T Consensus       693 ~~~~LE~~r~~~l~~~~~~iQ~~~R~~l~Rk~~~r~r~  730 (730)
T d1w7ja2         693 QVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRR  730 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999999999999999999999998619

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=97.68  E-value=0.00013  Score=46.01  Aligned_cols=45  Identities=20%  Similarity=0.245  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Q ss_conf             99998999999978669999999999---9999999999999999833
Q 002751          741 LKIRNHIVKLQAHVRGHQVRKQYKKV---VWSVSIVEKAILRWRRRGS  785 (885)
Q Consensus       741 l~~R~~vI~IQa~~RG~~aRk~yk~l---~~Sv~~lqk~i~rwrrrr~  785 (885)
                      ..+.+.+++||++||||++||+|+++   ..++.+||+.+|+|..++.
T Consensus       732 ~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~  779 (794)
T d2mysa2         732 DKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKH  779 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999999999999999999999999999999999999999999823

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=97.64  E-value=0.00015  Score=45.55  Aligned_cols=45  Identities=31%  Similarity=0.544  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q ss_conf             9999899999997866999999999999---99999999999999833
Q 002751          741 LKIRNHIVKLQAHVRGHQVRKQYKKVVW---SVSIVEKAILRWRRRGS  785 (885)
Q Consensus       741 l~~R~~vI~IQa~~RG~~aRk~yk~l~~---Sv~~lqk~i~rwrrrr~  785 (885)
                      ..+.+.+++||++||||++||+|+++..   ++..+|+.+|+|..+|.
T Consensus       728 ~~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~  775 (789)
T d1kk8a2         728 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN  775 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999999999999999999999999999999999999803

>d1imhc1 b.1.18.1 (C:368-468) T-cell transcription factor NFAT5 (TONEBP) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: T-cell transcription factor NFAT5 (TONEBP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=0.00035  Score=43.05  Aligned_cols=80  Identities=23%  Similarity=0.321  Sum_probs=58.9

Q ss_pred             CEEEEEEECCCCCCCCCEEEEEEC-CCCCCCCCCCCCCEEEEE-------------CCCCCCEEEEECCEEEEECCC---
Q ss_conf             518797606887789973899985-688887779998559951-------------992133066544748853489---
Q 002751          306 LFSIRDFSPDWAYSGAETKVLIIG-MFLGTKKLSSDTKWGCMF-------------GEIEVPAEVLTDNVIRCQAPS---  368 (885)
Q Consensus       306 ~f~I~d~sP~w~~~~GgtKVlI~G-~f~~~~~~~~~~~~~c~F-------------Gd~~Vpae~v~~gvLrC~~Pp---  368 (885)
                      ++.|..+|..-|+.+||.+|.|+| .|..+       . .+.|             |+. .|+ .++...++|.+||   
T Consensus         1 ~P~I~r~s~~s~~v~GG~Ev~lL~ekv~kd-------d-~v~F~e~~~~~~~WE~~~~f-~~~-~vh~qaiv~ktPpY~~   70 (101)
T d1imhc1           1 VPEILKKSLHSCSVKGEEEVFLIGKNFLKG-------T-KVIFQENVSDENSWKSEAEI-DME-LFHQNHLIVKVPPYHD   70 (101)
T ss_dssp             CCEEEEESCCEEETTCCCEEEEEEECCCTT-------C-EEEEESSSCTTCSCEEEECB-CGG-GCCSSEEEEECCCCSC
T ss_pred             CCEEEEECCCCEEECCCCEEEEEECCCCCC-------C-EEEEEECCCCCCCEEEEEEE-CHH-HEEEEEEEEECCCCCC
T ss_conf             980898648821418996899996750889-------8-79999925999653799998-836-4465569985798668


Q ss_pred             ---CCCCCEEEEEEECCCCCCCCCEEEECCC
Q ss_conf             ---9982036999908974445420001035
Q 002751          369 ---HAAGRVPFYITGSNRLACSEVREFEYRE  396 (885)
Q Consensus       369 ---h~pG~V~l~Vt~~n~~~~Sev~~FeYr~  396 (885)
                         ..|=.|.|++.-+++ .+|+...|+|..
T Consensus        71 ~~I~~pV~V~~~L~rsd~-~~Se~~~FtY~P  100 (101)
T d1imhc1          71 QHITLPVSVGIYVVTNAG-RSHDVQPFTYTP  100 (101)
T ss_dssp             TTCSSCEEEEEEEEETTE-ECCSCEEEEEEC
T ss_pred             CCCCCEEEEEEEEEECCC-CCCCCCCEEECC
T ss_conf             653733899999996999-734885738788

>d1u36a_ b.1.18.1 (A:) p50 subunit of NF-kappa B transcription factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: p50 subunit of NF-kappa B transcription factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0054  Score=34.84  Aligned_cols=81  Identities=16%  Similarity=0.219  Sum_probs=59.2

Q ss_pred             EEEEEECCCCCCCCCEEEEEEC-CCCCCCCCCCCCCEEEEE-------------CCCCCCEEEEECCEEEEECCC-C---
Q ss_conf             8797606887789973899985-688887779998559951-------------992133066544748853489-9---
Q 002751          308 SIRDFSPDWAYSGAETKVLIIG-MFLGTKKLSSDTKWGCMF-------------GEIEVPAEVLTDNVIRCQAPS-H---  369 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtKVlI~G-~f~~~~~~~~~~~~~c~F-------------Gd~~Vpae~v~~gvLrC~~Pp-h---  369 (885)
                      .|.+.|=.-|+..||.+|.|+| .|...       ...+.|             |++ -++++.+...|+|.+|| +   
T Consensus         3 ~I~r~s~~s~sv~GG~Ev~Ll~~kv~K~-------di~V~F~e~~~~~~~WE~~~~f-~~~dvh~Q~aIvf~tPpY~~~~   74 (104)
T d1u36a_           3 KIVRMDRTAGCVTGGEEIWLLCDKVQKD-------DIQIRFYEEEENGGVWEGFGDF-SPTDVHRQFAICFKTPKYKDVN   74 (104)
T ss_dssp             CEEEESCSEEETTCCCEEEEEESCCCTT-------SCEEEEEECC----CEEEECBC-CGGGEETTTEEEEECCCCSCTT
T ss_pred             EEEEECCCCEECCCCCEEEEEECCCCCC-------CEEEEEEEECCCCCCEEEEEEE-CHHHCCCCEEEEEECCCCCCCC
T ss_conf             8999618704127986899997876889-------8599999927999805998898-8355312318999899977876


Q ss_pred             --CCCCEEEEEEECCCCCCCCCEEEECCC
Q ss_conf             --982036999908974445420001035
Q 002751          370 --AAGRVPFYITGSNRLACSEVREFEYRE  396 (885)
Q Consensus       370 --~pG~V~l~Vt~~n~~~~Sev~~FeYr~  396 (885)
                        .|=.|.++|.-...-.+|++..|+|..
T Consensus        75 I~~pV~V~i~l~r~sd~~~Sep~~F~Y~P  103 (104)
T d1u36a_          75 ITKPASVFVQLRRKSDLETSEPKPFLYYP  103 (104)
T ss_dssp             CSSCEEEEEEEECTTTCCBCCCEEEEEEC
T ss_pred             CCCCEEEEEEEEECCCCCCCCCCCEEECC
T ss_conf             68867999999959998715882758758

>d1a3qa1 b.1.18.1 (A:227-327) p52 subunit of NF-kappa B (NFKB) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: p52 subunit of NF-kappa B (NFKB)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0077  Score=33.79  Aligned_cols=87  Identities=15%  Similarity=0.272  Sum_probs=58.6

Q ss_pred             EEEEEECCCCCCCCCEEEEEEC-CCCCCC-CC----CCCCCEEEEECCCCCCEEEEECCEEEEECCCC------CCCCEE
Q ss_conf             8797606887789973899985-688887-77----99985599519921330665447488534899------982036
Q 002751          308 SIRDFSPDWAYSGAETKVLIIG-MFLGTK-KL----SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH------AAGRVP  375 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtKVlI~G-~f~~~~-~~----~~~~~~~c~FGd~~Vpae~v~~gvLrC~~Pph------~pG~V~  375 (885)
                      .|.+.|=.-|+..||.+|.|+| .|.... +.    ....+| -.||++ -++.+.+...++|.+||-      .|=.|.
T Consensus         3 ~I~r~s~~s~~v~GG~Ei~Ll~~kv~KddikV~F~E~~~~~W-E~~~~f-~~~dvh~q~aIvfktPpY~~~~I~~pV~V~   80 (101)
T d1a3qa1           3 KISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGW-QAFGDF-SPTDVHKQYAIVFRTPPYHKMKIERPVTVF   80 (101)
T ss_dssp             CEEEESCSEEETTCCCEEEEEESSCCTTTEEEEEEECSSSCE-EEECBC-CGGGEETTTEEEEECCCCSCTTCSSCEEEE
T ss_pred             EEEEECCCCEECCCCCEEEEEECCCCCCCCEEEEEECCCCCC-EEEEEE-CHHHCCCCEEEEEECCCCCCCCCCCCEEEE
T ss_conf             899831871113898689999675687888999885599997-897582-989901433999989998886568867999


Q ss_pred             EEEEECCCCCCCCCEEEECCC
Q ss_conf             999908974445420001035
Q 002751          376 FYITGSNRLACSEVREFEYRE  396 (885)
Q Consensus       376 l~Vt~~n~~~~Sev~~FeYr~  396 (885)
                      ++|.-.+.-.+|++..|+|..
T Consensus        81 i~l~r~sd~~~Sep~~F~Y~P  101 (101)
T d1a3qa1          81 LQLKRKRGGDVSDSKQFTYYP  101 (101)
T ss_dssp             EEEEETTTCCBCCCEEEEEEC
T ss_pred             EEEEECCCCCCCCCCCEEECC
T ss_conf             999989999706884638769

>d1my7a_ b.1.18.1 (A:) p65 subunit of NF-kappa B (NFKB), dimerization domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: p65 subunit of NF-kappa B (NFKB), dimerization domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.0081  Score=33.65  Aligned_cols=83  Identities=20%  Similarity=0.239  Sum_probs=59.4

Q ss_pred             EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE--------CCCCCCEEEEECCEEEEECCCC------CCCC
Q ss_conf             8797606887789973899985688887779998559951--------9921330665447488534899------9820
Q 002751          308 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF--------GEIEVPAEVLTDNVIRCQAPSH------AAGR  373 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtKVlI~G~f~~~~~~~~~~~~~c~F--------Gd~~Vpae~v~~gvLrC~~Pph------~pG~  373 (885)
                      .|.++|-.-|+..||.+|.++|..+.      +-...|.|        |++ .++++.....|+|.+||-      .|=.
T Consensus         5 ~I~r~s~~s~sv~GG~Ei~Llc~kv~------kddi~V~F~E~~WE~~g~f-~~~dvh~Q~aIvfktPpY~~~~I~~pV~   77 (107)
T d1my7a_           5 KICRVNRRSGSCLGGDEIFLLCDKVQ------KEDIEVYFTGPGWEARGSF-SQADVHRQVAIVFRTPPYADPSLQAPVR   77 (107)
T ss_dssp             CEEEESCSEEETTCCCEEEEEESCCC------TTSCEEEEEETTEEEECBC-CGGGBCTTSEEEEECCCCSCTTCCSCEE
T ss_pred             EEEECCCCCEECCCCCEEEEEECCCC------CCCCEEEEECCCCEEEEEC-CHHHCCCCCEEEEECCCCCCCCCCCCEE
T ss_conf             89982477201189967999945436------6887999963582897571-8888314428999899988876798779


Q ss_pred             EEEEEE-ECCCCCCCCCEEEECCCCC
Q ss_conf             369999-0897444542000103588
Q 002751          374 VPFYIT-GSNRLACSEVREFEYREKP  398 (885)
Q Consensus       374 V~l~Vt-~~n~~~~Sev~~FeYr~~~  398 (885)
                      |.++|. -+++ .+|++..|+|...+
T Consensus        78 V~i~l~r~sd~-~~Sep~~F~Y~P~~  102 (107)
T d1my7a_          78 VSMQLRRPSDR-ELSEPMEFQYLPDT  102 (107)
T ss_dssp             EEEEEEETTTT-EECCCEEEEEECCC
T ss_pred             EEEEEEECCCC-CCCCCCCEEEECCC
T ss_conf             99999979999-70688173886898

>d1gjia1 b.1.18.1 (A:182-281) p65 subunit of NF-kappa B (NFKB), dimerization domain {Chicken (Gallus gallus), C-rel [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: p65 subunit of NF-kappa B (NFKB), dimerization domain
species: Chicken (Gallus gallus), C-rel [TaxId: 9031]

Probab=96.34  E-value=0.0047  Score=35.29  Aligned_cols=82  Identities=15%  Similarity=0.137  Sum_probs=56.6

Q ss_pred             EEEEEECCCCCCCCCEEEE-EECCCCCCCCCCCCCCEEEEECCC--CC-----CEEEEECCEEEEECCCC-----CCCCE
Q ss_conf             8797606887789973899-985688887779998559951992--13-----30665447488534899-----98203
Q 002751          308 SIRDFSPDWAYSGAETKVL-IIGMFLGTKKLSSDTKWGCMFGEI--EV-----PAEVLTDNVIRCQAPSH-----AAGRV  374 (885)
Q Consensus       308 ~I~d~sP~w~~~~GgtKVl-I~G~f~~~~~~~~~~~~~c~FGd~--~V-----pae~v~~gvLrC~~Pph-----~pG~V  374 (885)
                      .|.+.|..-|+..||.+|. ++|..+..       ...|.|-+.  +.     ++.+.+...++|..||.     .|=.|
T Consensus         5 ~I~r~s~~s~sv~GG~Ei~LLc~Kv~k~-------di~V~F~e~~WE~~~~f~~~dvh~q~aIvf~tP~Y~~~I~~pV~V   77 (100)
T d1gjia1           5 RICRVNKNCGSVKGGDEIFILCDKVQKD-------DIEVRFVLDNWEAKGSFSQADVHRQVAIVFRTPPFLRDITEPITV   77 (100)
T ss_dssp             CEEEESCSEEETTCCCEEEEEESCCCGG-------GCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSCCSSCEEE
T ss_pred             EEEEECCCCEECCCCCEEEEEECCCCCC-------CCEEEEECCCCEEEEEECHHHEECCEEEEEECCCCCCCCCCCEEE
T ss_conf             8998138721127984899992744489-------989999546708899988899002219999899987877888799


Q ss_pred             EEEEEECCCCCCCCCEEEECCC
Q ss_conf             6999908974445420001035
Q 002751          375 PFYITGSNRLACSEVREFEYRE  396 (885)
Q Consensus       375 ~l~Vt~~n~~~~Sev~~FeYr~  396 (885)
                      .++|.-.+.-.+|++..|+|..
T Consensus        78 ~i~l~r~sd~~~Sep~~F~Y~P   99 (100)
T d1gjia1          78 KMQLRRPSDQEVSEPMDFRYLP   99 (100)
T ss_dssp             EEEEEEGGGTEECCCEEEEEEC
T ss_pred             EEEEEECCCCCCCCCCCEEECC
T ss_conf             9999989999614874638769

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=94.93  E-value=0.024  Score=30.37  Aligned_cols=36  Identities=28%  Similarity=0.345  Sum_probs=25.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf             999999999999999999999997332189999999999
Q 002751          809 YEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMV  847 (885)
Q Consensus       809 ~d~L~~~rkq~e~~~~~A~~riqs~~R~~~AR~eyrrl~  847 (885)
                      .+.|...|   +..+.+++++||+.+|+..+|+.|+|++
T Consensus       694 ~~~LE~~r---~~~l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         694 VAYLEKIR---ADKLRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999---9999999999999999999999999861