Citrus Sinensis ID: 002765
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 883 | 2.2.26 [Sep-21-2011] | |||||||
| Q7XPY2 | 951 | Plasma membrane ATPase OS | yes | no | 0.971 | 0.902 | 0.887 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.971 | 0.901 | 0.876 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | yes | no | 0.967 | 0.899 | 0.872 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.970 | 0.901 | 0.867 | 0.0 | |
| P20649 | 949 | ATPase 1, plasma membrane | no | no | 0.967 | 0.899 | 0.865 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.968 | 0.901 | 0.867 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.968 | 0.901 | 0.844 | 0.0 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.970 | 0.903 | 0.850 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.968 | 0.900 | 0.839 | 0.0 | |
| Q42556 | 954 | ATPase 9, plasma membrane | no | no | 0.983 | 0.909 | 0.831 | 0.0 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1547 bits (4006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 766/863 (88%), Positives = 822/863 (95%), Gaps = 5/863 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG LEEIKNE+VDLE IPIEEVFEQLKC+REGL+S+EG R+ +FGPNKLEEKKE
Sbjct: 1 MGG-----LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKE 55
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVME AAIMAIALANGGG+ PDW+DFVGIIVLLVINSTISFIEEN
Sbjct: 56 SKILKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEEN 115
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 116 NAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLK 175
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 176 IDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 235
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQ VLTAIGNFCICSIAVGIV EII+M+P+QHR YR GI+NLLVLLIGGIPIAMPTVLSV
Sbjct: 236 FQTVLTAIGNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSV 295
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGV+K
Sbjct: 296 TMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDK 355
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+HV+LLAARASRTENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 356 DHVLLLAARASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 415
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV++KVHAVIDK+AERGLRSL VARQE+PEK+KES G
Sbjct: 416 GNWHRASKGAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGG 475
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 476 PWQFVGLLPLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 535
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ+KDAS+ ALPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPA
Sbjct: 536 ALLGQNKDASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPA 595
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIR
Sbjct: 596 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIR 655
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IVLGF+LIALIWK+DFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+V
Sbjct: 656 IVLGFLLIALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIV 715
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LGSYLA+MTV+FFW M KTDFF+D FGVRS+R EMM+ALYLQVSI+SQALIFVTRSR
Sbjct: 716 LGSYLALMTVIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSR 775
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSFIERPGLLL TAF++AQLVATF+AVYANW FARI+G GWGWAGVIWLYS+V YFPLD
Sbjct: 776 SWSFIERPGLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLD 835
Query: 841 ILKFGIRYILSGKAWDTLLENKV 863
I KF IR++LSG+AWD LLENK+
Sbjct: 836 IFKFFIRFVLSGRAWDNLLENKI 858
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1535 bits (3974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 752/858 (87%), Positives = 815/858 (94%)
Query: 5 KAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVL 64
KAISLEEIKNE+VDLE+IPIEEVFEQLKC+REGL++DEGA RL +FGPNKLEEK ESK+L
Sbjct: 3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKIL 62
Query: 65 KFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGN 124
KFLGFMWNPLSWVMEAAA+MAIALANG G+ PDWQDF+GII LLVINSTISFIEENNAGN
Sbjct: 63 KFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGN 122
Query: 125 AAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQS 184
AAAALMA LAPKTKVLRDGRWSEQ+A+ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQS
Sbjct: 123 AAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQS 182
Query: 185 ALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 244
ALTGESLPVTKNP DEVFSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN VGHFQKV
Sbjct: 183 ALTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 245 LTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304
LTAIGNFCICSIA+G++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI 364
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+KE+V+
Sbjct: 303 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVL 362
Query: 365 LLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWH 424
LLAARASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID++ NWH
Sbjct: 363 LLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWH 422
Query: 425 RASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQL 484
RASKGAPEQIL LCN +EDVR+KVH+++DK+AERGLRSL VAR+ +PEK+KESPG W+
Sbjct: 423 RASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEF 482
Query: 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544
VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+SLLG
Sbjct: 483 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 542
Query: 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604
QDKD++IA+LP++ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKA
Sbjct: 543 QDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 602
Query: 605 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664
DIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV G
Sbjct: 603 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 662
Query: 665 FMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSY 724
FM IALIWK+DFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y
Sbjct: 663 FMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGY 722
Query: 725 LAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSF 784
A+MTVVFFW M TDFFSD FGV+SLR +EMM+ALYLQVSIISQALIFVTRSRSWSF
Sbjct: 723 QALMTVVFFWAMHDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFVTRSRSWSF 782
Query: 785 IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKF 844
+ERPG+LL AF+IAQLVAT IAVYANW+FAR++GCGWGWAGVIWLYS++ Y PLDI+KF
Sbjct: 783 LERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKF 842
Query: 845 GIRYILSGKAWDTLLENK 862
IRYILSGKAW+ LL+NK
Sbjct: 843 AIRYILSGKAWNNLLDNK 860
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1533 bits (3969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 745/854 (87%), Positives = 804/854 (94%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLG 68
L+ IKNESVDL RIP+EEVFE+LKC+++GLT++E +HRL VFGPNKLEEKKESK+LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 69 FMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 128
FMWNPLSWVME AA+MAIALANGGGR PDWQDFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 129 LMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
LMA LAPKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
+S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKKADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
AV DATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM I
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSPQPDSWKL++IF+TGVVLG Y A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
TVVFFW+M+ +DFFS+ FGVR L RP++MMAALYLQVSIISQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 789 GLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848
GLLL AFVIAQLVATFIAVYANWSFARIEG GWGWAGVIWLYS +TY PLD+LKFGIRY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 849 ILSGKAWDTLLENK 862
+LSGKAW LLENK
Sbjct: 844 VLSGKAWLNLLENK 857
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1508 bits (3904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/862 (86%), Positives = 811/862 (94%), Gaps = 5/862 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG LEEI+NE+VDLE IPIEEVFEQLKC+R+GLTSDEGA R+ +FG NKLEEKKE
Sbjct: 1 MGG-----LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKE 55
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SKVLKFLGFMWNPLSWVME AAIMAIALANGGG+ PDWQDFVGIIVLLVINSTISFIEEN
Sbjct: 56 SKVLKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEEN 115
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMANLAPKTKVLRDGRW EQ+ASILVPGD++SIKLGDIVPADARLLEGDPLK
Sbjct: 116 NAGNAAAALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLK 175
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQS LTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 176 IDQSGLTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 235
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQ+VLTAIGNFCI SIAVGIV EII+M+P+Q RKYR GI+NLLVLLIGGIPIAMPTVLSV
Sbjct: 236 FQQVLTAIGNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSV 295
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSH+LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VD+NL+EVFAKGV+K
Sbjct: 296 TMAIGSHKLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDK 355
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNP DKRTALTYID++
Sbjct: 356 EHVLLLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAE 415
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDV++KVH+VI+K+AERGLRSL VARQE+PEK+K+SPG
Sbjct: 416 GNWHRASKGAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGG 475
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 476 PWQFIGLLPLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 535
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ KD S+ +LPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPA
Sbjct: 536 ALLGQSKDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPA 595
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIR
Sbjct: 596 LKKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIR 655
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IVLGFMLIALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV
Sbjct: 656 IVLGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVV 715
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG+YLA++TVVFFWL+ KTDFF++ FGV S+R + M+ALYLQVSI+SQALIFVTRSR
Sbjct: 716 LGTYLALVTVVFFWLIHKTDFFTNKFGVESIRNTEFKEMSALYLQVSIVSQALIFVTRSR 775
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPG LL TAF++AQLVAT IAVYANW FARI+G GWGWAGVIWL+S+V YFPLD
Sbjct: 776 SWSFVERPGFLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLD 835
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
I KF IR++LSG+AWD LL+NK
Sbjct: 836 IFKFFIRFVLSGRAWDNLLQNK 857
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1496 bits (3872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 739/854 (86%), Positives = 800/854 (93%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLG 68
LE+IKNE+VDLE+IPIEEVF+QLKC+REGLT+ EG R+ +FGPNKLEEKKESK+LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 69 FMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 128
FMWNPLSWVMEAAA+MAIALANG R PDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 129 LMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
LMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
++IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLI
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLG Y AIM
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
+V+FFW KTDFFSD FGVRS+R DE+M A+YLQVSIISQALIFVTRSRSWSF+ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 789 GLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848
G LL AFVIAQLVAT IAVYA+W+FA+++G GWGWAGVIW+YS+VTYFP DILKF IRY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 849 ILSGKAWDTLLENK 862
ILSGKAW +L +N+
Sbjct: 844 ILSGKAWASLFDNR 857
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1494 bits (3867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 742/855 (86%), Positives = 793/855 (92%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
SLE+IKNE+VDLE+IPIEEVF+QLKCSREGLT+ EG R+ +FGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
A ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
DA++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
IAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFML
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y AI
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
MTV+FFW KTDFFSD FGVRS+R E+M A+YLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 788 PGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
PG LL AF+IAQL+AT IAVYANW FA+I G GWGWAGVIWLYS+VTYFPLD+ KF IR
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 848 YILSGKAWDTLLENK 862
YILSGKAW L ENK
Sbjct: 843 YILSGKAWLNLFENK 857
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1482 bits (3836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/855 (84%), Positives = 789/855 (92%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
S +EIK E+VDLERIP+EEVFEQLKCS+EGL+SDEGA RL +FG NKLEEK E+K LKFL
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME+AAIMAI LANGGG+ PDWQDF+GI+VLL+INSTISFIEENNAGNAAA
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMANLAPKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+A
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
D S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKADIG
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVVLG+Y+A+
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
TV+FFWL TDFFS FGVRS++ +E+MAALYLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 788 PGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
PG LL AFVIAQLVAT IAVYANW FARI GCGWGWAG IW+YS++TY PLDILKF IR
Sbjct: 786 PGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIR 845
Query: 848 YILSGKAWDTLLENK 862
Y L+GKAWD ++ K
Sbjct: 846 YALTGKAWDNMINQK 860
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1475 bits (3819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/857 (85%), Positives = 792/857 (92%)
Query: 6 AISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLK 65
A LE+I NE+VDLE+IPIEEVF+QLKCSREGL+ EG +RL +FGPNKLEEKKESK+LK
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 66 FLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125
FLGFMWNPLSWVMEAAAIMAIALANGGG+ PDWQDFVGI+ LLVINSTISF+EENNAGNA
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 126 AAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
AAALMA LAPKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 245
LTGESLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 246 TAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
TAIGNFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVIL 365
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 366 LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
AARASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLV 485
SKGAPEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ V
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 545
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 546 DKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605
KD ++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKAD
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 606 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665
IGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 666 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYL 725
MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 726 AIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFI 785
AIMTVVFFW KTDFF F VR LR EMM+ALYLQVSI+SQALIFVTRSRSWSF
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFT 781
Query: 786 ERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 845
ERPG L AF +AQL+AT IAVY NW FARI+G GWGWAGVIWLYS+V YFPLDI+KF
Sbjct: 782 ERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFA 841
Query: 846 IRYILSGKAWDTLLENK 862
IRYIL+G AW +++N+
Sbjct: 842 IRYILAGTAWKNIIDNR 858
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1470 bits (3805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/856 (83%), Positives = 791/856 (92%), Gaps = 1/856 (0%)
Query: 7 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKF 66
IS +EIK E+VDLE+IP++EVF+QLKCSREGL+S+EG +RL +FG NKLEEK E+K LKF
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 67 LGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAA 126
LGFMWNPLSWVMEAAAIMAI LANGGGR PDWQDFVGI LL+INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 127 AALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
AALMANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 246
TGESLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306
AIGNFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILL 366
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRA 426
+ARASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 427 SKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
SKGAPEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606
KD + +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKKADI
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 607 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666
GIAV DATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 667 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLA 726
L+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+Y+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 727 IMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE 786
++TVVFFWL T FFSD FGVRSL+ + +E++A LYLQVSIISQALIFVTRSRSWSF+E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 787 RPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGI 846
RPGLLL AF +AQL+AT IA YA+W FARI+GCGWGW GVIW+YS+VTY PLDILKF
Sbjct: 784 RPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFIT 843
Query: 847 RYILSGKAWDTLLENK 862
RY LSGKAW+ ++EN+
Sbjct: 844 RYTLSGKAWNNMIENR 859
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1467 bits (3798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/868 (83%), Positives = 791/868 (91%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M G+K S ++IKNE +DLE+IPIEEV QL+C+REGLTSDEG RL +FGPNKLEEKKE
Sbjct: 1 MAGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
+KVLKFLGFMWNPLSWVME AAIMAIALANGGGR PDWQDFVGI VLL+INSTISFIEEN
Sbjct: 61 NKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GH
Sbjct: 181 IDQSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+ +++ AARASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++
Sbjct: 361 DQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDAN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHR SKGAPEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG
Sbjct: 421 GNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGE 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+ADIGIAVADATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV+GFML+ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVV
Sbjct: 661 IVMGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG+YLA+MTVVFFW TDFFS FGVRS+ P E+ AA+YLQVSI+SQALIFVTRSR
Sbjct: 721 LGTYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWS++ERPG L +AF +AQL+AT IAVYANW+FARI G GWGWAGVIWLYS+V Y PLD
Sbjct: 781 SWSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENKVNCIGK 868
ILKF IRY LSG+AWD ++ENK K
Sbjct: 841 ILKFIIRYSLSGRAWDNVIENKTAFTSK 868
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 883 | ||||||
| 6759597 | 954 | plasma membrane H+ ATPase [Prunus persic | 0.976 | 0.903 | 0.922 | 0.0 | |
| 392055980 | 954 | plasma membrane H+-ATPase [Malus xiaojin | 0.976 | 0.903 | 0.921 | 0.0 | |
| 224121346 | 955 | autoinhibited H+ ATPase [Populus trichoc | 0.976 | 0.902 | 0.918 | 0.0 | |
| 449499538 | 955 | PREDICTED: LOW QUALITY PROTEIN: plasma m | 0.976 | 0.902 | 0.909 | 0.0 | |
| 224142101 | 954 | predicted protein [Populus trichocarpa] | 0.976 | 0.903 | 0.911 | 0.0 | |
| 356552575 | 951 | PREDICTED: plasma membrane ATPase 4-like | 0.972 | 0.903 | 0.916 | 0.0 | |
| 225429772 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 0.976 | 0.903 | 0.912 | 0.0 | |
| 356563778 | 951 | PREDICTED: ATPase 5, plasma membrane-typ | 0.972 | 0.903 | 0.915 | 0.0 | |
| 147800127 | 954 | hypothetical protein VITISV_014422 [Viti | 0.976 | 0.903 | 0.892 | 0.0 | |
| 225446002 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 0.976 | 0.903 | 0.892 | 0.0 |
| >gi|6759597|emb|CAB69823.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1607 bits (4161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 795/862 (92%), Positives = 834/862 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDKAISLEEIKNESVDLERIPIEEVFEQLKC+REGLT DEGA+RL VFGPNKLEEKKE
Sbjct: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCTREGLTGDEGANRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKLLKFLGFMWNPLSWVMEAAAVMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQEASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGILIELIVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEAR G+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARVGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQILALCNC+ED +K+VHAVIDKFAERGLRSL VARQ++PEKTKESPG
Sbjct: 421 GNWHRASKGAPEQILALCNCKEDFKKRVHAVIDKFAERGLRSLAVARQQVPEKTKESPGT 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDASIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+V
Sbjct: 661 IVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG Y+A+MTVVFFWLM+ T FFS+ F VR L RP++MMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYMALMTVVFFWLMKDTKFFSNTFNVRHLGDRPEQMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL AF++AQLVAT IAVYANW+FARIEGCGWGWAGVIWL+S+VTYFPLD
Sbjct: 781 SWSFVERPGLLLLGAFMVAQLVATLIAVYANWAFARIEGCGWGWAGVIWLFSVVTYFPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
+LKF IRYILSGKAWD LLENK
Sbjct: 841 LLKFAIRYILSGKAWDNLLENK 862
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|392055980|gb|AFM52333.1| plasma membrane H+-ATPase [Malus xiaojinensis] | Back alignment and taxonomy information |
|---|
Score = 1599 bits (4141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 794/862 (92%), Positives = 830/862 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M GDKAISLEEIKNESVDLERIP+EEVFEQLKC+REGLT +EGA+RL VFGPNKLEEKKE
Sbjct: 1 MAGDKAISLEEIKNESVDLERIPVEEVFEQLKCTREGLTGEEGANRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKLLKFLGFMWNPLSWVMEAAALMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQDASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQDASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+ EII+MYP+Q RKYR GIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGILIEIIVMYPIQKRKYRQGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+ED +KKVH VIDKFAERGLRSLGVARQ++PEKTKESPG
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDFKKKVHGVIDKFAERGLRSLGVARQQVPEKTKESPGT 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ+KDA+IA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQNKDAAIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFMLIALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+V
Sbjct: 661 IVFGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTVVFFWLM TDFFS+ F VRSLR RP++MMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYLALMTVVFFWLMNDTDFFSEKFHVRSLRDRPEQMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL AF+IAQLVAT IAVYANW FARI+G GWGWAGVIWLYS+VTY PLD
Sbjct: 781 SWSFVERPGLLLLGAFMIAQLVATLIAVYANWGFARIKGAGWGWAGVIWLYSIVTYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
LKF IRYI SGKAW+ LLENK
Sbjct: 841 FLKFAIRYIQSGKAWNNLLENK 862
|
Source: Malus xiaojinensis Species: Malus xiaojinensis Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121346|ref|XP_002330804.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222872606|gb|EEF09737.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1597 bits (4136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 792/862 (91%), Positives = 830/862 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M ISLEEIKNESVDLERIP+EEVFEQLKC+REGL++DEGA RL VFGPNKLEEKKE
Sbjct: 1 MSSKGGISLEEIKNESVDLERIPMEEVFEQLKCTREGLSADEGASRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANG GR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKILKFLGFMWNPLSWVMEAAALMAIALANGDGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+AE+I+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGIIAELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD +LIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDTSLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV+KKVH+VIDKFAERGLRSLGVA+QE+PEK+K++ GA
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDVKKKVHSVIDKFAERGLRSLGVAKQEVPEKSKDAAGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQLVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIF+TG+V
Sbjct: 661 IVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFSTGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG Y+A+MTV+FFW+M+ TDFFSD FGVRSLR +EMMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYMALMTVLFFWIMKDTDFFSDKFGVRSLRNNDEEMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPG LL AFV AQLVAT IAVYANW FARIEGCGWGWAGVIWL+S+VTY PLD
Sbjct: 781 SWSFVERPGFLLLGAFVAAQLVATLIAVYANWGFARIEGCGWGWAGVIWLFSVVTYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
ILKF IRYILSGKAWD LLENK
Sbjct: 841 ILKFAIRYILSGKAWDNLLENK 862
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449499538|ref|XP_004160843.1| PREDICTED: LOW QUALITY PROTEIN: plasma membrane ATPase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1588 bits (4113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 785/863 (90%), Positives = 823/863 (95%), Gaps = 1/863 (0%)
Query: 1 MGGD-KAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK 59
MGGD KAI+LEEIKNE+VDLE IPIEEVFEQLKC+REGLTS+EGAHRL VFGPNKLEEKK
Sbjct: 1 MGGDHKAITLEEIKNEAVDLEHIPIEEVFEQLKCTREGLTSEEGAHRLQVFGPNKLEEKK 60
Query: 60 ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEE 119
ESK+LKFLGFMWNPLSWVMEAAA+MAI LANGGGR PDWQDFVGII LL INSTISFIEE
Sbjct: 61 ESKLLKFLGFMWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEE 120
Query: 120 NNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
NNAGNAAAALMA LAPKTKVLRDGRWSEQ+A+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 121 NNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPL 180
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239
KIDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG
Sbjct: 181 KIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 240
Query: 240 HFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLS 299
HFQKVLTAIGNFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLS
Sbjct: 241 HFQKVLTAIGNFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLS 300
Query: 300 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE 359
VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR+LIEVF KGVE
Sbjct: 301 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLIEVFVKGVE 360
Query: 360 KEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDS 419
KE+VILLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDS
Sbjct: 361 KEYVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDS 420
Query: 420 DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPG 479
+G WHR SKGAPEQIL LCN REDVR+KVHAVIDKFAERGLRSLGVARQE+ EK K+SPG
Sbjct: 421 NGTWHRVSKGAPEQILNLCNSREDVRRKVHAVIDKFAERGLRSLGVARQEVHEKXKDSPG 480
Query: 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539
PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS
Sbjct: 481 GPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 540
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
SSLLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP
Sbjct: 541 SSLLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 600
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659
ALKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI
Sbjct: 601 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 660
Query: 660 RIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGV 719
RIV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIF TG+
Sbjct: 661 RIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFGTGI 720
Query: 720 VLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRS 779
VLG YLA+MTV+FFW ++ T+FFS+ F V+SL+ P+E+MAALYLQVSIISQALIFVTRS
Sbjct: 721 VLGGYLALMTVLFFWAVKDTNFFSEKFNVKSLKDSPEELMAALYLQVSIISQALIFVTRS 780
Query: 780 RSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPL 839
RSWS++ERPGLLL AF+IAQLVAT IAVYANW FARI+G GWGWAGVIWLYSLVTY PL
Sbjct: 781 RSWSYMERPGLLLVGAFIIAQLVATVIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPL 840
Query: 840 DILKFGIRYILSGKAWDTLLENK 862
DILKFGIRY SGKAWDTLLENK
Sbjct: 841 DILKFGIRYAHSGKAWDTLLENK 863
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142101|ref|XP_002324397.1| predicted protein [Populus trichocarpa] gi|222865831|gb|EEF02962.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1583 bits (4100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 786/862 (91%), Positives = 827/862 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGA RL VFGPNKLEEKKE
Sbjct: 1 MSSKGGISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGATRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAI LANG GR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKILKFLGFMWNPLSWVMEAAALMAIVLANGDGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+GI+ EI++MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGIIIEIVVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++LIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID++
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV++KVH+VIDKFAERGLRSLGVA+QE+PEK+K++PGA
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDVKRKVHSVIDKFAERGLRSLGVAKQEVPEKSKDAPGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQLVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 481 PWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDA+IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDAAIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIF+TGVV
Sbjct: 661 IVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFSTGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTV+FFW+M+ TDFFSD FGVRSLR EMMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYLALMTVLFFWIMKDTDFFSDKFGVRSLRDSKYEMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL +AFV+AQL+AT IAVYANW FA I+GCGWGWAGVIWL+SLVTY PLD
Sbjct: 781 SWSFVERPGLLLVSAFVVAQLIATLIAVYANWGFAHIKGCGWGWAGVIWLFSLVTYLPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
+LKF IRYILSGKAWD LENK
Sbjct: 841 VLKFAIRYILSGKAWDNFLENK 862
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552575|ref|XP_003544641.1| PREDICTED: plasma membrane ATPase 4-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1582 bits (4096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 790/862 (91%), Positives = 827/862 (95%), Gaps = 3/862 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG ISLEEIKNE+VDLERIPIEEVFEQLKCSR GLTS+EGA+RL VFGPNKLEEKKE
Sbjct: 1 MGG---ISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSEEGANRLQVFGPNKLEEKKE 57
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEEN
Sbjct: 58 SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEEN 117
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NAGNAAAALMAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLS 177
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 178 VDQSALTGESLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 237
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI E+I+MYP+QHR+YR+GIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 238 FQKVLTAIGNFCICSIAVGIAIELIVMYPIQHRRYREGIDNLLVLLIGGIPIAMPTVLSV 297
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 298 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 357
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
E+VILLAARASRTENQDAIDAAIVGMLADPKEAR+GVREVHFLPFNPVDKRTALTYIDSD
Sbjct: 358 EYVILLAARASRTENQDAIDAAIVGMLADPKEARSGVREVHFLPFNPVDKRTALTYIDSD 417
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG
Sbjct: 418 GNWHRASKGAPEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGG 477
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 478 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 537
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 538 ALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 597
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 598 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 657
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 658 IVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 717
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LGSY+A+MTVVFFW M+ T+FFS+ FGVR LR PDEMMAALYLQVSIISQALIFVTRSR
Sbjct: 718 LGSYMALMTVVFFWAMKDTNFFSNKFGVRPLRDSPDEMMAALYLQVSIISQALIFVTRSR 777
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL AF IAQLVATFIAVYANW FARI+G GWGWAGVIWLYS+VTY PLD
Sbjct: 778 SWSFVERPGLLLLGAFFIAQLVATFIAVYANWGFARIKGMGWGWAGVIWLYSVVTYIPLD 837
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
+LKF IRYILSGKAWD LLENK
Sbjct: 838 LLKFAIRYILSGKAWDNLLENK 859
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429772|ref|XP_002282619.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1582 bits (4095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/862 (91%), Positives = 822/862 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M DK+I LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGA RL +FGPNKLEEKKE
Sbjct: 1 MAADKSIGLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGASRLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGG+ PDWQDFVGIIVLL+INSTISFIEEN
Sbjct: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGQPPDWQDFVGIIVLLLINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQDAAILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEI+AVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIDAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF KGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFTKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHVILLAARASR ENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVILLAARASRIENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LCNC+EDVRKKVH VIDKFAERGLRSL VARQE+PEKTK++PGA
Sbjct: 421 GTWHRASKGAPEQILNLCNCKEDVRKKVHGVIDKFAERGLRSLAVARQEVPEKTKDAPGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLL LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+V
Sbjct: 661 IVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTVVFFW+M+ TDFF + FGV+S+R EMMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYLALMTVVFFWVMKDTDFFPEKFGVKSIRYSEHEMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWS++ERPGLLL AF+ AQLVAT I+VYANW FARI+G GWGWAGVIWLYS+VTY PLD
Sbjct: 781 SWSYVERPGLLLVGAFIAAQLVATVISVYANWGFARIKGTGWGWAGVIWLYSVVTYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
LKF IRYI SGKAWD LLENK
Sbjct: 841 FLKFAIRYIQSGKAWDNLLENK 862
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563778|ref|XP_003550136.1| PREDICTED: ATPase 5, plasma membrane-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1580 bits (4090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 789/862 (91%), Positives = 827/862 (95%), Gaps = 3/862 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG ISLEEIKNE+VDLERIPIEEVFEQLKCSR GLTS+EG +RL VFGPNKLEEKKE
Sbjct: 1 MGG---ISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSEEGGNRLQVFGPNKLEEKKE 57
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEEN
Sbjct: 58 SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEEN 117
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NAGNAAAALMAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLS 177
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 178 VDQSALTGESLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 237
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGIV E+I+MYP+QHR+YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 238 FQKVLTAIGNFCICSIAVGIVIELIVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSV 297
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 298 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 357
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
E+VILLAARASRTENQDAIDAAIVGMLADPKEAR+G+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 358 EYVILLAARASRTENQDAIDAAIVGMLADPKEARSGIREVHFLPFNPVDKRTALTYIDSD 417
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG
Sbjct: 418 GNWHRASKGAPEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGG 477
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 478 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 537
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 538 ALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 597
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 598 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 657
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 658 IVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 717
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LGSY+A+MTVVFFW M+ T+FFS+ FGVR L PD+MMAALYLQVSIISQALIFVTRSR
Sbjct: 718 LGSYMALMTVVFFWAMKDTNFFSNKFGVRPLSDSPDKMMAALYLQVSIISQALIFVTRSR 777
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL AF IAQLVATFIAVYANWSFARI+G GWGWAGVIWLYS+VTY PLD
Sbjct: 778 SWSFVERPGLLLLGAFFIAQLVATFIAVYANWSFARIKGMGWGWAGVIWLYSVVTYIPLD 837
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
+LKF IRYILSGKAWD LLENK
Sbjct: 838 LLKFAIRYILSGKAWDNLLENK 859
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147800127|emb|CAN64375.1| hypothetical protein VITISV_014422 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1577 bits (4084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 769/862 (89%), Positives = 820/862 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDK+ISLEEIKNE+VDLE+IPIEEVFEQLKC++EGLTS EG RL +FGPNKLEEKKE
Sbjct: 1 MGGDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAA+MAI LANG G+ PDWQDFVGI+ LLVINSTISFIEEN
Sbjct: 61 SKFLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 VDQSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LC C+EDV+KK H++IDKFAERGLRSL V RQE+PEK+KES G+
Sbjct: 421 GKWHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGS 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPV+ELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 661 IVFGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTV+FFW+M+ TDFF D FGV+S+R P EMMAALYLQVS++SQALIFVTRSR
Sbjct: 721 LGGYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL TAF+IAQLVAT IAVYANW FARI+G GWGWAGV+W+YS+V Y PLD
Sbjct: 781 SWSFVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
+KF IRYILSGKAW LLENK
Sbjct: 841 FIKFFIRYILSGKAWLNLLENK 862
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446002|ref|XP_002267501.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] gi|297735422|emb|CBI17862.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1577 bits (4084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 769/862 (89%), Positives = 820/862 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDK+ISLEEIKNE+VDLE+IPIEEVFEQLKC++EGLTS EG RL +FGPNKLEEKKE
Sbjct: 1 MGGDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAA+MAI LANG G+ PDWQDFVGI+ LLVINSTISFIEEN
Sbjct: 61 SKFLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 VDQSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LC C+EDV+KK H++IDKFAERGLRSL V RQE+PEK+KES G+
Sbjct: 421 GKWHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGS 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPV+ELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 661 IVFGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTV+FFW+M+ TDFF D FGV+S+R P EMMAALYLQVS++SQALIFVTRSR
Sbjct: 721 LGGYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWSF+ERPGLLL TAF+IAQLVAT IAVYANW FARI+G GWGWAGV+W+YS+V Y PLD
Sbjct: 781 SWSFVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
+KF IRYILSGKAW LLENK
Sbjct: 841 FIKFFIRYILSGKAWLNLLENK 862
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 883 | ||||||
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.967 | 0.899 | 0.810 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.967 | 0.899 | 0.800 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.970 | 0.903 | 0.785 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.968 | 0.901 | 0.781 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.976 | 0.903 | 0.771 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.968 | 0.900 | 0.776 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.975 | 0.900 | 0.774 | 0.0 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.968 | 0.890 | 0.767 | 0.0 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.964 | 0.899 | 0.696 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.971 | 0.892 | 0.681 | 0.0 |
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3612 (1276.5 bits), Expect = 0., P = 0.
Identities = 692/854 (81%), Positives = 749/854 (87%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
L+ IKNESVDL RIP+EEVFE+LKC+++GLT++E +HRL VFGPN G
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NGGGR PDWQDFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
+S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM I
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSPQPDSWKL++IF+TGVVLG Y A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
TVVFFW+M+ +DFFS+ FGVR L RP++MMAALYLQVSIISQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 789 GLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848
GLLL AFVIAQLVATFIAVYANWSFARIEG GWGWAGVIWLYS +TY PLD+LKFGIRY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 849 ILSGKAWDTLLENK 862
+LSGKAW LLENK
Sbjct: 844 VLSGKAWLNLLENK 857
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3568 (1261.1 bits), Expect = 0., P = 0.
Identities = 684/854 (80%), Positives = 743/854 (87%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
LE+IKNE+VDLE+IPIEEVF+QLKC+REGLT+ EG R+ +FGPN G
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NG R PDWQDFVGII LLVINSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
++IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLI
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLG Y AIM
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
+V+FFW KTDFFSD FGVRS+R DE+M A+YLQVSIISQALIFVTRSRSWSF+ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 789 GLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848
G LL AFVIAQLVAT IAVYA+W+FA+++G GWGWAGVIW+YS+VTYFP DILKF IRY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 849 ILSGKAWDTLLENK 862
ILSGKAW +L +N+
Sbjct: 844 ILSGKAWASLFDNR 857
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3517 (1243.1 bits), Expect = 0., P = 0.
Identities = 673/857 (78%), Positives = 735/857 (85%)
Query: 6 AISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXX 65
A LE+I NE+VDLE+IPIEEVF+QLKCSREGL+ EG +RL +FGPN
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 66 XXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXX 125
GFMWNPLSWVME NGGG+ PDWQDFVGI+ LLVINSTISF+EE
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 126 XXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
PKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 245
LTGESLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 246 TAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
TAIGNFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVIL 365
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 366 LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
AARASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLV 485
SKGAPEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ V
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 545
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 546 DKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXX 605
KD ++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 606 XXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 666 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYL 725
MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 726 AIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFI 785
AIMTVVFFW KTDFF F VR LR EMM+ALYLQVSI+SQALIFVTRSRSWSF
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFT 781
Query: 786 ERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 845
ERPG L AF +AQL+AT IAVY NW FARI+G GWGWAGVIWLYS+V YFPLDI+KF
Sbjct: 782 ERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFA 841
Query: 846 IRYILSGKAWDTLLENK 862
IRYIL+G AW +++N+
Sbjct: 842 IRYILAGTAWKNIIDNR 858
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3499 (1236.8 bits), Expect = 0., P = 0.
Identities = 668/855 (78%), Positives = 733/855 (85%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXX 67
S +EIK E+VDLERIP+EEVFEQLKCS+EGL+SDEGA RL +FG N
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 68 GFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXX 127
GFMWNPLSWVME NGGG+ PDWQDF+GI+VLL+INSTISFIEE
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 128 XXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
PKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+A
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXX 607
D S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 608 XXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVVLG+Y+A+
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
TV+FFWL TDFFS FGVRS++ +E+MAALYLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 788 PGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
PG LL AFVIAQLVAT IAVYANW FARI GCGWGWAG IW+YS++TY PLDILKF IR
Sbjct: 786 PGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIR 845
Query: 848 YILSGKAWDTLLENK 862
Y L+GKAWD ++ K
Sbjct: 846 YALTGKAWDNMINQK 860
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3495 (1235.4 bits), Expect = 0., P = 0.
Identities = 665/862 (77%), Positives = 733/862 (85%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXX 60
M G+K S ++IKNE +DLE+IPIEEV QL+C+REGLTSDEG RL +FGPN
Sbjct: 1 MAGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKE 60
Query: 61 XXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEX 120
GFMWNPLSWVME NGGGR PDWQDFVGI VLL+INSTISFIEE
Sbjct: 61 NKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEEN 120
Query: 121 XXXXXXXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
PKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GH
Sbjct: 181 IDQSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+ +++ AARASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++
Sbjct: 361 DQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDAN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHR SKGAPEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG
Sbjct: 421 GNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGE 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPA 600
Query: 601 LKKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+ VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV+GFML+ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVV
Sbjct: 661 IVMGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG+YLA+MTVVFFW TDFFS FGVRS+ P E+ AA+YLQVSI+SQALIFVTRSR
Sbjct: 721 LGTYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
SWS++ERPG L +AF +AQL+AT IAVYANW+FARI G GWGWAGVIWLYS+V Y PLD
Sbjct: 781 SWSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLD 840
Query: 841 ILKFGIRYILSGKAWDTLLENK 862
ILKF IRY LSG+AWD ++ENK
Sbjct: 841 ILKFIIRYSLSGRAWDNVIENK 862
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3478 (1229.4 bits), Expect = 0., P = 0.
Identities = 665/856 (77%), Positives = 736/856 (85%)
Query: 7 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXX 66
IS +EIK E+VDLE+IP++EVF+QLKCSREGL+S+EG +RL +FG N
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 67 XGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXX 126
GFMWNPLSWVME NGGGR PDWQDFVGI LL+INSTISFIEE
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 127 XXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
PKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 246
TGESLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306
AIGNFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILL 366
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRA 426
+ARASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 427 SKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
SKGAPEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXX 606
KD + +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKK
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 607 XXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 667 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLA 726
L+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+Y+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 727 IMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE 786
++TVVFFWL T FFSD FGVRSL+ + +E++A LYLQVSIISQALIFVTRSRSWSF+E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 787 RPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGI 846
RPGLLL AF +AQL+AT IA YA+W FARI+GCGWGW GVIW+YS+VTY PLDILKF
Sbjct: 784 RPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFIT 843
Query: 847 RYILSGKAWDTLLENK 862
RY LSGKAW+ ++EN+
Sbjct: 844 RYTLSGKAWNNMIENR 859
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3450 (1219.5 bits), Expect = 0., P = 0.
Identities = 670/865 (77%), Positives = 729/865 (84%)
Query: 3 GDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXX 62
GDK LE + E+VDLE +PIEEVFE L+CSREGLT++ RL +FG N
Sbjct: 2 GDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESK 61
Query: 63 XXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXX 122
GFMWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 62 FLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNA 121
Query: 123 XXXXXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKID
Sbjct: 122 GNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKID 181
Query: 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 242
QS+LTGESLPVTK P D V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN VGHFQ
Sbjct: 182 QSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQ 241
Query: 243 KVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
+VLTAIGNFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 242 QVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
Query: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEH 362
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ +
Sbjct: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADT 361
Query: 363 VILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGN 422
V+L+AA+ASR ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP DKRTALTYIDSDG
Sbjct: 362 VVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGK 421
Query: 423 WHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
HR SKGAPEQIL L + R ++ ++VHAVIDKFAERGLRSL VA QE+PE TKES G PW
Sbjct: 422 MHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPW 481
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
Q +GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+L
Sbjct: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
LGQ KD SI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALK
Sbjct: 542 LGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
Query: 603 KXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
K VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
Query: 663 LGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLG 722
LGFML+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV G
Sbjct: 662 LGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFG 721
Query: 723 SYLAIMTVVFFWLMRKTDFFSDAFGVRSL-RTRPDE---MMAALYLQVSIISQALIFVTR 778
SY+A+MTV+FFW KTDFF FGV +L +T D+ + +A+YLQVSIISQALIFVTR
Sbjct: 722 SYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTR 781
Query: 779 SRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFP 838
SRSWS++ERPG+LL AF++AQLVAT IAVYANWSFA IEG GWGWAGVIWLY++V Y P
Sbjct: 782 SRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIP 841
Query: 839 LDILKFGIRYILSGKAWDTLLENKV 863
LDI+KF IRY LSG+AWD ++E +V
Sbjct: 842 LDIIKFLIRYALSGRAWDLVIEQRV 866
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3408 (1204.7 bits), Expect = 0., P = 0.
Identities = 659/859 (76%), Positives = 726/859 (84%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
LE + E+VDLE +PIEEVFE L+CS+EGLT+ RL +FG N G
Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 131
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTG
Sbjct: 132 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 191
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+ D V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ+GHFQ+VLTAI
Sbjct: 192 ESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAI 251
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 GNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 311
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ + V+L+AA
Sbjct: 312 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAA 371
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPK+ARAG++EVHFLPFNP DKRTALTYID++GN HR SK
Sbjct: 372 RASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSK 431
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L + + ++ ++VHAVIDKFAERGLRSL VA Q++PE K+S G PWQ VGL+
Sbjct: 432 GAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLM 491
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ+KD
Sbjct: 492 PLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 551
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
SI ALPVDELIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 552 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 611
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+
Sbjct: 612 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 671
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV GSY+A+M
Sbjct: 672 ALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMM 731
Query: 729 TVVFFWLMRKTDFFSDAFGVRSL-RTRPDE---MMAALYLQVSIISQALIFVTRSRSWSF 784
TV+FFW+ KTDFF FGV +L +T D+ + +A+YLQVSIISQALIFVTRSRSWSF
Sbjct: 732 TVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSF 791
Query: 785 IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKF 844
+ERPG+ L AF++AQLVAT IAVYANWSFA IEG GWGWAGVIWLY+++ Y PLD +KF
Sbjct: 792 VERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKF 851
Query: 845 GIRYILSGKAWDTLLENKV 863
IRY LSG+AWD ++E +V
Sbjct: 852 FIRYALSGRAWDLVIEQRV 870
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3085 (1091.0 bits), Expect = 0., P = 0.
Identities = 594/853 (69%), Positives = 683/853 (80%)
Query: 10 EEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGF 69
+ + +DL +P+EEVFE L+ S +GL S + RL +FGPN GF
Sbjct: 13 DTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGF 72
Query: 70 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 129
MWNPLSWVME N PDW+DF GI+ LL+IN+TISF EE
Sbjct: 73 MWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAAL 132
Query: 130 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 189
KT+VLRDG+W EQDASILVPGD+ISIKLGDI+PADARLLEGDPLKIDQS LTGE
Sbjct: 133 MARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGE 192
Query: 190 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249
SLPVTK ++VFSGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IG
Sbjct: 193 SLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIG 252
Query: 250 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
NFCICSIAVG+V EIIIM+PVQHR YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRL
Sbjct: 253 NFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312
Query: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 369
SQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVD+NLIEVF ++K+ ++LLA R
Sbjct: 313 SQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGR 372
Query: 370 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
ASR ENQDAIDAAIV MLADP+EARA +RE+HFLPFNPVDKRTA+TYIDSDG W+RA+KG
Sbjct: 373 ASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKG 432
Query: 430 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 489
APEQ+L LC + ++ ++V+A+ID+FAE+GLRSL VA QEIPEK+ SPG PW+ GLLP
Sbjct: 433 APEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLP 492
Query: 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 549
LFDPPRHDS ETI RAL+LGV VKMITGDQLAI KETGRRLGMGTNMYPSSSLLG + D
Sbjct: 493 LFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDE 552
Query: 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 609
A+PVDELIE ADGFAGVFPEHKYEIVK LQE KH+ GMTGDGVNDAPALKK
Sbjct: 553 H-EAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIA 611
Query: 610 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669
VLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRIVLGF L+A
Sbjct: 612 VADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLA 671
Query: 670 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 729
LIW++DF PFMVLIIAILNDGTIMTISKDRV+PSP P+SWKL +IFATG+V+G+YLA++T
Sbjct: 672 LIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVT 731
Query: 730 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 789
V+F+W++ T FF F V+S+ +++ +A+YLQVSIISQALIFVTRSR WSF ERPG
Sbjct: 732 VLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPG 791
Query: 790 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 849
LL AF++AQL AT IAVYAN SFA+I G GW WAGVIWLYSL+ Y PLD++KF Y
Sbjct: 792 TLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYA 851
Query: 850 LSGKAWDTLLENK 862
LSG+AW+ +L+ K
Sbjct: 852 LSGEAWNLVLDRK 864
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3078 (1088.6 bits), Expect = 0., P = 0.
Identities = 596/874 (68%), Positives = 693/874 (79%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXX 67
+L+ I ES+DLE +P+EEVF+ LKC++EGLTS+E RL +FG N
Sbjct: 6 ALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFL 65
Query: 68 GFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXX 127
GFMWNPLSWVME +GGG+ D+ DFVGI+VLL+INSTISF+EE
Sbjct: 66 GFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAAA 125
Query: 128 XXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
PK K +RDG+W+E DA+ LVPGD++SIKLGDI+PADARLLEGDPLKIDQ+ LT
Sbjct: 126 ALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATLT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTKNP V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST VGHFQKVLTA
Sbjct: 186 GESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLTA 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIAVG+ EI+++Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+H
Sbjct: 246 IGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEVF +G++++ +L+A
Sbjct: 306 RLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARA+R ENQDAID AIV ML+DPKEARAG++E+HFLPF+P ++RTALTY+D +G HR S
Sbjct: 366 ARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPE+IL + + + ++++KVHA IDKFAERGLRSLG+A QE+P+ + G PW V L
Sbjct: 426 KGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVAL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAI KETGRRLGMGTNMYPSSSLL +
Sbjct: 486 LPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNN 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXX 607
++ VDELIE ADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 546 TEGVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIG 602
Query: 608 XXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+GFML
Sbjct: 603 IAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFML 662
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
+ + W+FDF PFMVL+IAILNDGTIMTISKDRVKPSP PD WKLKEIFATGVVLG+YLAI
Sbjct: 663 LCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAI 722
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRP-------------DEMMAALYLQVSIISQALI 774
MTVVFFW +T+FF + F VR+ ++M +A+YLQVS ISQALI
Sbjct: 723 MTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALI 782
Query: 775 FVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLV 834
FVTRSRSWSF+ERPG LL AF+IAQLVA+ I+ ANW FA I GWGW GVIW++++V
Sbjct: 783 FVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNIV 842
Query: 835 TYFPLDILKFGIRYILSGKAWDTLLENKVNCIGK 868
TY LD +KF +RY LSGK+WD ++E + GK
Sbjct: 843 TYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGK 876
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.8678 | 0.9682 | 0.9018 | no | no |
| P49380 | PMA1_KLULA | 3, ., 6, ., 3, ., 6 | 0.3734 | 0.9093 | 0.8932 | yes | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.8404 | 0.9750 | 0.9006 | no | no |
| P19657 | PMA2_YEAST | 3, ., 6, ., 3, ., 6 | 0.3871 | 0.8765 | 0.8173 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8764 | 0.9716 | 0.9012 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4160 | 0.8697 | 0.9540 | yes | no |
| P24545 | PMA1_ZYGRO | 3, ., 6, ., 3, ., 6 | 0.3841 | 0.8414 | 0.8076 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7538 | 0.9648 | 0.8996 | no | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.8327 | 0.9773 | 0.9017 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.8300 | 0.9750 | 0.9006 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8677 | 0.9705 | 0.9011 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.8317 | 0.9830 | 0.9098 | no | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.8399 | 0.9682 | 0.9009 | no | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.8723 | 0.9671 | 0.8998 | yes | no |
| P09627 | PMA1_SCHPO | 3, ., 6, ., 3, ., 6 | 0.3698 | 0.8935 | 0.8585 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8335 | 0.9750 | 0.9006 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7437 | 0.9716 | 0.8928 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.8444 | 0.9682 | 0.9018 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8335 | 0.9682 | 0.8906 | no | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.8876 | 0.9716 | 0.9022 | yes | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.8506 | 0.9705 | 0.9030 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.8653 | 0.9671 | 0.8998 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8338 | 0.6908 | 0.8664 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 883 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-179 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-112 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-92 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 7e-89 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 4e-79 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-78 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 5e-68 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 4e-63 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 7e-61 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-59 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-57 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-53 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-52 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-40 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-36 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 8e-35 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-33 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-32 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-31 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-29 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 7e-28 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-26 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 4e-26 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 8e-19 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 1e-17 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 1e-13 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-07 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-07 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 6e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.004 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 0.004 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.004 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1187 bits (3074), Expect = 0.0
Identities = 453/775 (58%), Positives = 559/775 (72%), Gaps = 23/775 (2%)
Query: 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96
GLTS E RL +GPN+L EKK S +LKFLGF WNPLSWVMEAAAI+AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156
W DFV I+ LL++N+TI FIEEN AGNA AL +LAPK +VLRDG+W E AS LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVV 216
DV+ +K+GDIVPAD RL EGD +++DQ+ALTGESLPVTK D +SGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 217 IATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275
ATG++TFFGKAA LV ST GH QK+L+ IG F I I V ++ E+++++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335
R+G+ LVLL+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395
TGTLTLNKL++D L F G +K+ V+L AA ASR E+QDAID A++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 396 GVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHAVIDK 454
G + + F+PF+PVDKRT T D + G + +KGAP+ IL LC+ ++++ +KV +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514
A RG R+LGVAR W +GLLPLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574
+TGD LAI KET RRLG+GTN+Y + LL D + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLP-SGLGEMVEDADGFAEVFPEHK 522
Query: 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 634
YEIV+ LQ+R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAARSA+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 635 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMT 694
A+L SR IFQRMK+Y IY ++ TIRIV F L+ LI F F P MV+IIAILNDGTIMT
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 642
Query: 695 ISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754
I+ D VKPS P W L+E+F VLG YL I T + + T FF D FG++ L
Sbjct: 643 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLL--- 699
Query: 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVY 809
+ + +YLQVSI A IFVTR+ + + ERPG LL AFVIAQ++ATFIAVY
Sbjct: 700 HGNLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 540 bits (1394), Expect = e-179
Identities = 263/911 (28%), Positives = 416/911 (45%), Gaps = 102/911 (11%)
Query: 20 ERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWV 77
+ E+ +L S GL+ +E RL +GPN+L EEKK S + KFL +P +
Sbjct: 26 LSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIIL 85
Query: 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
+ AA+++ + G D + I++++VIN+ + F++E A A AL +PK
Sbjct: 86 LLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKA 142
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
KVLRDG++ E AS LVPGD++ ++ GD+VPAD RLLE L++D+SALTGESLPV K
Sbjct: 143 KVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQA 202
Query: 198 YDE--------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV-GHFQ 242
+FSG+T G + +V+ATG T FGK A L+ + +V Q
Sbjct: 203 LPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQ 262
Query: 243 KVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL------LVLLIGGIPIAMPT 296
+ L +G F + ++A ++ +R G L L L + +P +P
Sbjct: 263 RKLNKLGKF------LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPA 316
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV---------- 346
V+++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGTLT NK+TV
Sbjct: 317 VVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGK 376
Query: 347 DRNLIEVFAKGVEKEHVILLAARASRTENQ-------DAIDAAIV------GMLADPKEA 393
D + ++ ++ A S T + D + A+V G D
Sbjct: 377 DIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGL 436
Query: 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC-------NCREDVRK 446
+ +PF+ KR ++ +G + KGAPE IL C E+ +
Sbjct: 437 EVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLR 496
Query: 447 KVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ----LVGLLPLFDPPRHDSAETI 502
+ + + A GLR L VA +++ K+ + +GL + DPPR D E I
Sbjct: 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAI 556
Query: 503 RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL--- 559
G+ V MITGD + + G+ + + G + + AL +EL
Sbjct: 557 EELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE----LDALSDEELAEL 612
Query: 560 IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD-ATDAAR 618
+E+ FA V PE K IV+ LQ+ H+ MTGDGVNDAPALK AD+GIA+ TDAA+
Sbjct: 613 VEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAK 672
Query: 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSP 678
A+DIVL + + I+ AV+ R ++ +K + +Y +S + VL +LI ++ F P
Sbjct: 673 EAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVL-TLLIYSLFNLFFLP 731
Query: 679 F---MVLIIAILNDGTI---MTISK------DRVKPSPQPDSWKLKEIFATGVVLGSYLA 726
+L I +L D + + R P+ + K + +++G A
Sbjct: 732 LTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSA 791
Query: 727 IMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE 786
I+ ++ F L L + + + +I L RSR F+
Sbjct: 792 ILFILTFLLYL----LGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLS 847
Query: 787 R-----PGLLLATAFVIA-QLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840
L LA +I QL+ F+ F + WL ++ L
Sbjct: 848 SLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQ-----PTPLSLFEWLIAIAVALLLL 902
Query: 841 ILKFGIRYILS 851
+ Y L
Sbjct: 903 YIVVSELYKLK 913
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 354 bits (910), Expect = e-112
Identities = 186/588 (31%), Positives = 285/588 (48%), Gaps = 78/588 (13%)
Query: 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTK--VLRDGRWSEQDASILVPGDVISI 161
I+ L+++ + ++ A + +L L VLR+G W E A LVPGDV+ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 162 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGE 211
K G+ VPAD LL G +D+S LTGES PV K D VF+G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 212 IEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV 270
+ VV TG+ T G+ A +V + Q + NF I + + ++A + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 271 QH----RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326
+ L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGM 386
+D LCSDKTGTLT NK+T+ I G E L+A + + D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQGVYI---DGGKEDNSSSLVACDNNYL-SGDPMEKALLKS 294
Query: 387 LADPKEARAGVRE---VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRED 443
+A G +E + PF+ V KR ++ DG+ KGAPE IL CN
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN---- 350
Query: 444 VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIR 503
+ A +GLR L A +E+ + + +GL+ DP R D+ ETI
Sbjct: 351 ---NYEEKYLELARQGLRVLAFASKELED--------DLEFLGLITFEDPLRPDAKETIE 399
Query: 504 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563
G+ V MITGD + K + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 564 DGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 623
D FA V PE K +IV+ LQ++ HI MTGDGVNDAPALKKAD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 624 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI 671
VL + LS I+ AV R IF +K+ +A++ + ++ +L+ +I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVI 531
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 311 bits (798), Expect = 2e-92
Identities = 225/800 (28%), Positives = 376/800 (47%), Gaps = 105/800 (13%)
Query: 16 SVDLERIPIEEVFEQLKCSRE-GLTS-DEGAHRLHVFGPNKLE-EKKESKVLKFLG-FMW 71
S + +EE +L+ + GL S E +HR G N+ + E+ ES KFL F+
Sbjct: 1 SKQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVK 60
Query: 72 NPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMA 131
NPL ++ A+A++++ + N D V I + ++I T+ F++E + + AL
Sbjct: 61 NPLILLLIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNK 113
Query: 132 NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESL 191
+ P+ ++R+G+ AS LVPGD++ + +GD VPAD R++E L ID+S LTGE+
Sbjct: 114 LVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETT 173
Query: 192 PVTK-------NPYDEV-------FSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 237
PV+K ++ F G+ + G + +V+ TG +T FG ++ + +
Sbjct: 174 PVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK 233
Query: 238 VGH-FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPT 296
QK + +G + ++ G++ I ++ Q + + + + L + IP +P
Sbjct: 234 PKTPLQKSMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPI 292
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV------DRNL 350
+++VT+A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N +TV D
Sbjct: 293 IVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLH 352
Query: 351 IEVFAKGVEK-EHVILLAARASRTENQD--------------------------AIDAAI 383
+ A + + VI+ D A+
Sbjct: 353 TMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVAL 412
Query: 384 VGMLA-----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS-KGAPEQILAL 437
+ +L D +E V EV PF+ K A+ + KGA EQ+L
Sbjct: 413 IELLMKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKY 469
Query: 438 CN-----------CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
C + R + + A GLR + A PEK + + +G
Sbjct: 470 CTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG--PEKGQLT------FLG 521
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
L+ + DPPR E + + GV + MITGD RRLGM S S+ G+
Sbjct: 522 LVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSGEK 579
Query: 547 KDA-SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605
DA L +++ K FA PEHK +IVK LQ+R + MTGDGVNDAPALK AD
Sbjct: 580 LDAMDDQQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLAD 637
Query: 606 IGIAVAD-ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664
IG+A+ TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ L
Sbjct: 638 IGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AALS 696
Query: 665 FMLIALIWKFD--FSPFMVLIIAILNDGT------IMTISKDRVKPSPQP--DSWKLKEI 714
+ +A + F + +L I IL DG + + KD ++ P+P D K++
Sbjct: 697 LIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDL 756
Query: 715 FATGVVLGSYLAIMTVVFFW 734
+V + + T+ F
Sbjct: 757 IKKILVSAIIIVVGTLFVFV 776
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 301 bits (771), Expect = 7e-89
Identities = 220/769 (28%), Positives = 365/769 (47%), Gaps = 86/769 (11%)
Query: 23 PIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEAA 81
E + +L GLT+ E RL FGPN+ EEKK + + NP +++ A
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--A 76
Query: 82 AIMAIALANGGGRDPDWQDFVGIIVLLVINSTI-SFIEENNAGNAAAALMANLAPKTKVL 140
+M ++ D + II L+V+ S + FI+E+ A AA AL + VL
Sbjct: 77 MLMGVSYLT------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVL 130
Query: 141 R------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVT 194
R +G E LVPGD+I + GDI+PADAR++ L I+QSALTGESLPV
Sbjct: 131 RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVE 190
Query: 195 K----------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 241
K + F G+ G +AVV+ATG T+FG A F
Sbjct: 191 KFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAF 250
Query: 242 QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 301
K + ++ I + V +V ++++ + + + L + +G P +P ++S
Sbjct: 251 DKGVKSVSKLLIRFMLV-MVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSN 309
Query: 302 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE 361
+A G+ +S++ I K ++AI+ MD+LC+DKTGTLT +K+ +++++ + G E
Sbjct: 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSE 366
Query: 362 HVILLA--ARASRTENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYI 417
V+ +A +T ++ +D A++ L + ++ + ++V +PF+ +R ++ +
Sbjct: 367 RVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVV-V 425
Query: 418 DSDGNWHR-ASKGAPEQILALCN----------CREDVRKKVHAVIDKFAERGLRSLGVA 466
++ R KGA E++L +C E + ++ + + +G+R + VA
Sbjct: 426 ENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 467 RQEIP------EKTKESPGAPWQLV--GLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518
+ + KT E QL+ G L DPP+ + E I G+NVK++TGD
Sbjct: 486 TKTLKVGEADFTKTDEE-----QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
Query: 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL---IEKADGFAGVFPEHKY 575
+ + +G+ N + LLG D I L +EL + K FA + P K
Sbjct: 541 NEIVTARICQEVGIDANDF----LLGAD----IEELSDEELARELRKYHIFARLTPMQKS 592
Query: 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635
I+ L++ H G GDG+NDAPAL+KAD+GI+V A D A+ ASDI+L E L V+
Sbjct: 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEE 652
Query: 636 AVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFM------VLIIAILND 689
V+ R F + Y S V ++ + F PF+ +LI +L D
Sbjct: 653 GVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASA-----FIPFLPMLSLHLLIQNLLYD 707
Query: 690 GTIMTISKDRVKPS--PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLM 736
+ +T+ D++ +P W+ K + + +G +I + F LM
Sbjct: 708 FSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLM 756
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 274 bits (704), Expect = 4e-79
Identities = 209/703 (29%), Positives = 322/703 (45%), Gaps = 118/703 (16%)
Query: 23 PIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWV-MEA 80
+EE L R+GLT ++ A RL +GPN++ EK +++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 81 AAI---MAIALANGGGRDPDWQDFVGIIVLLV---INSTISFIEENNAGNAAAALMANLA 134
AAI L G + D G+I++L ++ + F +E + AA AL A +
Sbjct: 91 AAISFFTDYWLPLRRGEETDL---TGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR 147
Query: 135 PKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
VLR + E LVPGD++ + GD++PAD RL+E L I Q+ LTG
Sbjct: 148 TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTG 207
Query: 189 ESLPVTKNPYDEV-------------------------FSGSTCKQGEIEAVVIATGVHT 223
E+LPV K YD + F G+ G AVV+ATG T
Sbjct: 208 EALPVEK--YDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265
Query: 224 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLL 283
+FG A + T F + + S++ ++ +++M PV
Sbjct: 266 YFGSLAKSIVGTRAQTAFDR--------GVNSVSWLLIRFMLVMVPV------------- 304
Query: 284 VLLIGGI--------------------PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 323
VLLI G P +P ++S +A G+ ++++ + KR+ AI+
Sbjct: 305 VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQ 364
Query: 324 EMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTEN--QDAIDA 381
MDVLC+DKTGTLT +++ ++ +L G + E V+ LA S ++ ++ +D
Sbjct: 365 NFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421
Query: 382 AIV--GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN 439
A+V AG R+V LPF+ V +R ++ D+ G KGA E++LA+
Sbjct: 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVAT 481
Query: 440 CRED----------VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESP---GAPWQLV- 485
D R+++ A+ + + G R L VA +EIP + LV
Sbjct: 482 HVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVI 541
Query: 486 -GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544
G L DPP+ +A I GV VK++TGD + + R +G+ P LLG
Sbjct: 542 RGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLG 597
Query: 545 QDKDASIAALPVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601
+ I A+ L +E+ FA + P K ++K LQ H G GDG+NDAPAL
Sbjct: 598 TE----IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPAL 653
Query: 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644
+ AD+GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 654 RDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 3e-78
Identities = 203/699 (29%), Positives = 326/699 (46%), Gaps = 108/699 (15%)
Query: 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMW----N 72
+ +P EE+++ EGL E G N+L +K L W N
Sbjct: 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHL---WVCYRN 103
Query: 73 PLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINST-ISFIEENNAGNAAAALMA 131
P + ++ ++ A + G+I L+V ST ++FI+E + AA AL A
Sbjct: 104 PFNILLTILGAISYATEDLFA--------AGVIALMVAISTLLNFIQEARSTKAADALKA 155
Query: 132 NLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
++ VLR + W E LVPGD+I + GD++PAD R+L+ L + Q++
Sbjct: 156 MVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQAS 215
Query: 186 LTGESLPVTK----------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232
LTGESLPV K NP + F G+ G +AVVIATG +T+FG+ A V
Sbjct: 216 LTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRV 275
Query: 233 DST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGG-- 289
++ FQ+ I ++ ++ +++M PV VLLI G
Sbjct: 276 SEQDSEPNAFQQ--------GISRVSWLLIRFMLVMAPV-------------VLLINGYT 314
Query: 290 ------------------IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 331
P +P +++ T+A G+ +LS+Q I KR+ AI+ MD+L
Sbjct: 315 KGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDIL 374
Query: 332 CSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARAS--RTENQDAIDAAIVGMLAD 389
C+DKTGTLT +K+ ++ + ++ G E V+ A S +T ++ +D A++ + +
Sbjct: 375 CTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDE 431
Query: 390 PKEARAGV--REVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-------- 439
+++ +PF+ +R ++ ++ + KGA E+IL +C+
Sbjct: 432 ESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEI 491
Query: 440 --CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ---LVGLLPLFDPP 494
+ + +++ V D +GLR + VA + +P + + A L G + DPP
Sbjct: 492 VPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551
Query: 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554
+ +A ++ GV VK++TGD + + +G+ L+G D I L
Sbjct: 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEV----LIGSD----IETL 603
Query: 555 PVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611
DEL E+ FA + P HK IV L+ H+ G GDG+NDAPAL+ ADIGI+V
Sbjct: 604 SDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD 663
Query: 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 650
A D AR A+DI+L E L V+ V+ R F M Y
Sbjct: 664 GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 5e-68
Identities = 184/717 (25%), Positives = 316/717 (44%), Gaps = 87/717 (12%)
Query: 25 EEVFEQLKCS-REGL--TSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVM--- 78
E + +LK EG+ +S R V+G N+L EK FL +W LS
Sbjct: 46 EGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLIL 102
Query: 79 -EAAAIMAIALA------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALM- 130
AA++++ L + W + V I+V +++ ++ + + L
Sbjct: 103 LSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNR 162
Query: 131 ANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGES 190
A K V+R G+ + +V GD++S+ GD+VPAD + G L+ID+S++TGES
Sbjct: 163 EKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGES 222
Query: 191 LPVTKNPYDEVF--SGSTCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQVGHFQK 243
P+ K P + F SG+ +G +V A GV++F GK + DST +
Sbjct: 223 DPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSE 282
Query: 244 VLTAIGNF-CICSIAVGIVA---EIIIMYPVQHRKYRDGIDNLLVLLIGGIPI---AMPT 296
+ IG F ++ + +V + + R + L I + I A+P
Sbjct: 283 LAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPE 342
Query: 297 V--LSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352
L+VT+A+ ++ + + + + A E M +CSDKTGTLT N ++V + I
Sbjct: 343 GLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 402
Query: 353 VFAKGVEK------EHV--ILLAARA-------------------SRTENQDAIDAAIVG 385
V +HV IL+ + S+TE A+ +
Sbjct: 403 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTEC--ALLDFGLL 460
Query: 386 MLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC----NC- 440
+L D +E RA + V PFN K ++ S G + KGA E +L C +
Sbjct: 461 LLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSN 520
Query: 441 ------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPLF 491
+D + + VI+ A LR++ +A ++ + K+ P L+G++ +
Sbjct: 521 GEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIK 580
Query: 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551
DP R E ++ G+ V+M+TGD + K R G+ T + + S+
Sbjct: 581 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT---FGGLAMEGKEFRSL 637
Query: 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611
+D ++ K A P K +V L++ + +TGDG NDAPALK AD+G ++
Sbjct: 638 VYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMG 697
Query: 612 DA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY-----TIYAVSITIRIV 662
+ T+ A+ ASDI+L + + I+ AV R ++ ++ + T+ V++ + V
Sbjct: 698 ISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 754
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 4e-63
Identities = 160/607 (26%), Positives = 244/607 (40%), Gaps = 98/607 (16%)
Query: 81 AAIMAIALANGGGRDPDWQDFVGIIVLLVINSTIS-FIEE---NNAGNAAAALMANLAPK 136
A I A A + P + + +++ L + ++E A A AL+ LAPK
Sbjct: 156 ATIGAYAYSLYATLFPVYFEEAAMLIFLF---LLGRYLEARAKGRARRAIRALLD-LAPK 211
Query: 137 T--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVT 194
T V DG E + GD++ ++ G+ +P D ++ G +D+S LTGESLPV
Sbjct: 212 TATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVE 270
Query: 195 KNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFC 252
K P DEVF+G+ G + V G T + LV ++ + Q++ + F
Sbjct: 271 KKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV 330
Query: 253 ICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLS 310
+ + + + + + L +L+ P A+ L+ AI G R +
Sbjct: 331 PVVLVIAALT-FALWPLFGGGDWETALYRALAVLVIACPCAL--GLATPTAILVGIGRAA 387
Query: 311 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 370
++G + K A+E +A +D + DKTGTLT K V +V A +++ ++ LAA
Sbjct: 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV----TDVVALDGDEDELLALAAAL 443
Query: 371 SRTENQ---DAI-DAAIVGMLADPKEARA----GVREVHFLPFNPVDKRTALTYIDSDGN 422
+ AI AA L D ++ GV VD L
Sbjct: 444 EQHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAE-------VDGERVL-------- 488
Query: 423 WHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
G L D+ + I+ G + VA
Sbjct: 489 -----VGNAR---LLGEEGIDL-PLLSERIEALESEGKTVVFVAVDG------------- 526
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+LVG++ L D R D+ E I LG+ V M+TGD + + LG
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG----------- 575
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+DE+ A + PE K EIV+ LQ M GDG+NDAPAL
Sbjct: 576 -------------IDEV------RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALA 616
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIRI 661
AD+GIA+ TD A A+D+VL LS + A+ SRA + +K N I I
Sbjct: 617 AADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAI 676
Query: 662 VLGFMLI 668
L +
Sbjct: 677 PLAAGGL 683
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 7e-61
Identities = 142/581 (24%), Positives = 237/581 (40%), Gaps = 82/581 (14%)
Query: 106 VLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPGDVISI 161
+LL + +EE G A+ AL + LAP T + DG E L GD++ +
Sbjct: 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIV 82
Query: 162 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
+ G+ +P D ++ G+ +D+SALTGES+PV K DEVF+G+ G + V G
Sbjct: 83 RPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGE 141
Query: 222 HTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFCICSIAVGIVAEIIIMYPVQHRKYRDGI 279
+ + LV ++ + Q++ I + +A+ ++ ++ + +
Sbjct: 142 DSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLT-FVVWLAL---GALGAL 197
Query: 280 DNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 337
L +L+ P A+ L+ +AI +++G + K A+E++A + + DKTG
Sbjct: 198 YRALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTG 255
Query: 338 TLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGV 397
TLT K TV IE E +L A A + + AIV
Sbjct: 256 TLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV----------RYA 303
Query: 398 REVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA----LCNCREDVRKKVHAVID 453
++ D + + G A+ E++ + +++
Sbjct: 304 KKRGLELPKQED----VEEVPGKG--VEATVDGGEEVRIGNPRFLELAIEPISASPDLLN 357
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV 512
+ +G + VA +L+G++ L D R ++ E I G +
Sbjct: 358 EGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404
Query: 513 KMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572
M+TGD + + LG +DE+ A + PE
Sbjct: 405 VMLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPE 434
Query: 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632
K IVK LQE + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS
Sbjct: 435 DKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSS 494
Query: 633 IISAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFMLIALIW 672
+ +A+ SR + +K N + I L + +W
Sbjct: 495 LPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLW 535
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 220 bits (562), Expect = 1e-59
Identities = 190/796 (23%), Positives = 340/796 (42%), Gaps = 150/796 (18%)
Query: 9 LEEIKNE-SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEEKKES-KVLK 65
L+E+K E +D ++ ++E+ + GL++ A L GPN L + + +K
Sbjct: 6 LDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVK 65
Query: 66 FLGFMWNPLSWVMEAAAIMA-IALANGGGRDPDWQD---FVGII--VLLVINSTISFIEE 119
F ++ S ++ AI+ +A + + Q+ ++G++ +++I S+ +E
Sbjct: 66 FCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQE 125
Query: 120 NNAGNAAAALMANLAPKTK-VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178
+ + N+ P+ V+RDG +A +V GD++ +K GD +PAD R++
Sbjct: 126 AKSSKIMESF-KNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184
Query: 179 LKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKA 228
K+D S+LTGES P T+ NP + F + C +G +V+ TG T G+
Sbjct: 185 CKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244
Query: 229 AHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGID 280
A L ++ HF ++T + F S + +I+ Y + + +
Sbjct: 245 ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGY-----TWLEAVI 296
Query: 281 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 297 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356
Query: 341 LNKLTV-----DRNLIE----------VFAKGVEK----EHVILLAARASRTENQDAI-- 379
N++TV D + E F K + L RA Q+ +
Sbjct: 357 QNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPI 416
Query: 380 -------DAAIVGML-------ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
DA+ +L E R +V +PFN +K + + D R
Sbjct: 417 LKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPR 476
Query: 426 ---ASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472
KGAPE+IL C+ E++++ + G R LG +P+
Sbjct: 477 HLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPD 536
Query: 473 K---------TKES--PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 521
+ T + P VGL+ + DPPR + + + + G+ V M+TGD
Sbjct: 537 EQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 596
Query: 522 IGKETGRRLGMGTNMYPSSSLLGQDKDASIAA---LPVDELIEKADG------------- 565
K + +G+ + G + IAA +PV ++ +
Sbjct: 597 TAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648
Query: 566 ---------------FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+
Sbjct: 649 SEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708
Query: 611 ADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669
A +D ++ A+D++L + + I++ V R IF +K Y ++ I
Sbjct: 709 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP--------- 759
Query: 670 LIWKFDFSPFMVLIIA 685
+ +PF++ IIA
Sbjct: 760 -----EITPFLIFIIA 770
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 2e-57
Identities = 76/223 (34%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIK 162
I++L++IN+ + +E A A AL L P V+RDG+ E A LV GD++ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 163 LGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVH 222
GD VPAD R++EG L++D+SALTGESLPV K+ D VF+G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 223 TFFGKAAHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 281
T GK A LV+ Q++L + + I + + + +++ + + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 282 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 1e-53
Identities = 147/587 (25%), Positives = 242/587 (41%), Gaps = 93/587 (15%)
Query: 101 FVGIIVLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPG 156
F +L+ ++E G A+ AL +A L P T + DG E +L PG
Sbjct: 54 FDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPG 113
Query: 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVV 216
D++ + G+ +P D ++EG+ ++D+S +TGESLPV K D V +G+ G +
Sbjct: 114 DIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRA 172
Query: 217 IATGVHTFFGKAAHLVD----STNQVGHFQKVLTAIGNFCICSIAV-GIVAEIIIMYPVQ 271
ATG T + LV S + + + +IA+ V +I+
Sbjct: 173 TATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFV 232
Query: 272 HRKYRDGIDNLLVLLIG---GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328
+ VL+I + +A PTV+ A+ + ++ G + K A+E A +
Sbjct: 233 FALEV----AVTVLIIACPCALGLATPTVI----AVATGLAAKNGVLIKDGDALERAANI 284
Query: 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLA 388
D + DKTGTLT K TV + VF + E + L AA + +E+ + AIV
Sbjct: 285 DTVVFDKTGTLTQGKPTV--TDVHVFGESDRDELLALAAALEAGSEH--PLAKAIV---- 336
Query: 389 DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKV 448
+ + D + + I +G + L N + +
Sbjct: 337 ------SYAKAKGITLSQVSDFKA-IPGIGVEGTVE-------GHTIQLGNEKLLGENGL 382
Query: 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNL 508
+ G S+ VA +L G+L L D + ++ E I+
Sbjct: 383 KTDGEVEEGGGTTSVLVAVNG-------------ELAGVLALADQLKPEAKEVIQALKRR 429
Query: 509 GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568
G+ M+TGD K + LG IE + A
Sbjct: 430 GIEPVMLTGDNRKTAKAVAKELG----------------------------IE--NVRAE 459
Query: 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628
V P+ K ++K+LQE+ + M GDG+NDAPAL +AD+GIA+ TD A A+D+VL
Sbjct: 460 VLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRN 519
Query: 629 GLSVIISAVLTSRAIFQRMKN-------YTIYAVSITIRIVLGFMLI 668
L+ + +A+ SR +R+K Y + A+ I ++ ++
Sbjct: 520 DLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPAGIL 566
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 191 bits (488), Expect = 2e-52
Identities = 167/624 (26%), Positives = 255/624 (40%), Gaps = 111/624 (17%)
Query: 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
M AA+ A+A+ ++ + +++L I T+ A A ALM LAP T
Sbjct: 5 MALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDT 56
Query: 138 -KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
+VLR G E L GDV+ +K G+ VP D +L G +D+SALTGES+PV K
Sbjct: 57 ARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPVEKA 115
Query: 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAIGNFCICS 255
P DEVF+G+ G + VV + K +LV ++ ++ Q+ + +
Sbjct: 116 PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPV 175
Query: 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQG 313
+ +A ++ ++ ++ + LVLL+ P A+ V+S A ++ G
Sbjct: 176 VLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCAL--VISAPAAYLSAISAAARHG 231
Query: 314 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR-NLIEVF--AKGVEK--EHVILLAA 368
+ K A+E +A + + DKTGTLT + V EV A E+ H + A
Sbjct: 232 ILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAAEQASSHPLARAI 291
Query: 369 RASRTENQDAID-AAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
+ ++ + G GVR V VD I + + A
Sbjct: 292 VDYARKRENVESVEEVPGE---------GVRAV-------VDGGEV--RIGNPRSLEAAV 333
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
PE VH D +G
Sbjct: 334 GARPESAGKTI---------VHVARDG----------------------------TYLGY 356
Query: 488 LPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
+ L D PR D+AE I LG+ V M+TGD+ A+ + R LG
Sbjct: 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG--------------- 401
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606
+DE+ A + PE K EIVK L+E+ M GDG+NDAPAL AD+
Sbjct: 402 ---------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADV 446
Query: 607 GIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIRIVLG 664
GIA+ A +D A +D+VL LS + A+ +R + +K N I I + I+L
Sbjct: 447 GIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLA 506
Query: 665 FMLIALIWKFDFSPFMVLIIAILN 688
+ +W ++ ILN
Sbjct: 507 LFGVLPLWLAVLGHEGSTVLVILN 530
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 161 bits (408), Expect = 2e-40
Identities = 104/345 (30%), Positives = 157/345 (45%), Gaps = 54/345 (15%)
Query: 427 SKGAPEQILALCN-----------CREDVRKKVHAVIDKFAER-GLRSLGVARQEIPEKT 474
KGAPE +L C + ++ + +VI + LR L +A ++IP+
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 475 KESPGAPWQ----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 524
+E + +G++ + DPPR + A+ I + G+ V MITGD +
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 525 ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-----------FAGVFPEH 573
RR+G + D+D + + E E F+ V P H
Sbjct: 569 AICRRIG----------IFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSH 618
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E+V+ LQE+ I MTGDGVNDAPALKKADIGIA+ T+ A+ ASD+VL + + I
Sbjct: 619 KSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATI 678
Query: 634 ISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLIALIWKFDFSPFMVLIIAILNDGTI 692
++AV RAI+ MK + Y +S I +V F+ AL P +L + ++ DG
Sbjct: 679 VAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLP 738
Query: 693 MTI------SKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVV 731
T KD + P+ + E TG + YL + V
Sbjct: 739 ATALGFNPPDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYV 779
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 2e-36
Identities = 173/949 (18%), Positives = 308/949 (32%), Gaps = 264/949 (27%)
Query: 36 EGLTSDEGAHRLHVFGPNKLEEKKES--KVLK------FLGF------MWNPLSWVMEAA 81
GLT+ + A R +G N++E S ++LK F F +W + +
Sbjct: 138 NGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLDEYYYYSL 197
Query: 82 AIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR 141
I+ ++ I L V + + +++ V+R
Sbjct: 198 CIVFMS--------------STSISLSVYQIRKQMQRLRDMVHKPQSVI--------VIR 235
Query: 142 DGRWSEQDASILVPGDVISIKL--GDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD 199
+G+W + LVPGD++SI +P D+ LL G + +++S LTGES+PV K P
Sbjct: 236 NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKFPIP 294
Query: 200 E------------------VFSG-------STCKQGEIEAVVIATGVHTFFGKAAHLVDS 234
+ +F G A+V+ TG T G+ LV S
Sbjct: 295 DNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ---LVRS 351
Query: 235 ------TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIG 288
+ + + I +I + + +L ++ I
Sbjct: 352 ILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRP--LGKIILRSLDIITI- 408
Query: 289 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL---- 344
+P A+P LS+ + RL ++G I +DV C DKTGTLT + L
Sbjct: 409 VVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRG 468
Query: 345 -------------------TVDRNLIEVFA-------------------KGVEKEHVILL 366
+ A K E L
Sbjct: 469 VQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLE 528
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA-LTYIDSDGNWHR 425
S + + D + + F+ +R + + + + +
Sbjct: 529 EDDESAEPTS-----ILAVVRTDDPPQELSI--IRRFQFSSALQRMSVIVSTNDERSPDA 581
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT--------KES 477
KGAPE I +LC+ E V V+ + G R L +A +E+P+ T +++
Sbjct: 582 FVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDA 640
Query: 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY 537
+ +G + +P + D+ E I+ + MITGD R G+ +
Sbjct: 641 VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI---VN 697
Query: 538 PSSSLL-------GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
PS++L+ K I +D + + +P + + L R H+ M
Sbjct: 698 PSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLA-M 756
Query: 591 TGD--------------------------------------------------GVNDAPA 600
+G G ND A
Sbjct: 757 SGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGA 816
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+AD+GI++++A A A+ +S + + + R A+ + +
Sbjct: 817 LKQADVGISLSEAE--ASVAAPFTSKLASISCVPNVIREGRC-----------ALVTSFQ 863
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
+ L +LI + S + LI + L DG +TI
Sbjct: 864 MFKYMALYSLIQFYSVS-ILYLIGSNLGDGQFLTID------------------------ 898
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQ-ALIFVTRS 779
L ++ V + R + S + RP + ++Y+ S++ Q L +++
Sbjct: 899 ----LLLIFPVALLMSR-----NKPLKKLS-KERPPSNLFSVYILTSVLIQFVLHILSQV 948
Query: 780 RSWSFIER-----------------PGLLLATAFVIA--QLVATFIAVY 809
+ P LL F ++ Q + T I
Sbjct: 949 YLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVNS 997
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 8e-35
Identities = 96/303 (31%), Positives = 151/303 (49%), Gaps = 32/303 (10%)
Query: 80 AAAIMAIALANGGGRDPDWQDFVG---IIVLLVINSTISFIEENNAGNAAAALMANLAPK 136
AA ++ LA + FV I+++LV N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 137 TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
KVLRDGRWS A LVPGD++ + +GD VPAD R+L L++DQS LTGES+ V K+
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 197 ----PYDE---------VFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQ 242
P + +FSG+ G+ VV+ TG+ T GK + + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 243 KVLTAIGNFC------ICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLV---LLIGGIPI 292
K L G IC I V ++ P + I + L + IP
Sbjct: 195 KKLDEFGELLSKVIGLIC-ILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPE 253
Query: 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N+++V +
Sbjct: 254 GLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSV----CK 309
Query: 353 VFA 355
V A
Sbjct: 310 VVA 312
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 138 bits (348), Expect = 3e-33
Identities = 102/371 (27%), Positives = 166/371 (44%), Gaps = 62/371 (16%)
Query: 36 EGLTSDEGAHRLHVFGPNKLEEKKESKVLK-FLGFMWNPLSWVMEAAAIMAIALANGGGR 94
EGLT DE HRL G N+LE L + N + V+ AA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 95 DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV 154
DW + I ++ +N I FI+E A +L +P V+R+G+ D+ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY------DEV------- 201
PGD+ +K GD +PAD RL+E D++ LTGESLPV K+ + ++
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 202 --FSGSTCKQGEIEAVVIATGVHTFFGKAA---------------------------HLV 232
FS S +G + + IAT +++ G A L
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 233 DSTNQVGHF---------QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLL 283
+ G F + L+ + C + I+ II+M + ++ +
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAIYAI 314
Query: 284 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 343
L I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT+T K
Sbjct: 315 CLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGK 374
Query: 344 LTVDRNLIEVF 354
+ + I F
Sbjct: 375 MIARQIWIPRF 385
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 1e-32
Identities = 129/506 (25%), Positives = 212/506 (41%), Gaps = 84/506 (16%)
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
+ DG A+ L GD++ ++ G+I+P+D ++EG +D+SA+TGES PV +
Sbjct: 108 LLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 198 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCIC 254
+ V G+ ++ + A TF + LV+ + QK I I
Sbjct: 167 GGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER----QKTPNEIALT-IL 221
Query: 255 SIAVGIVAEIII--MYPVQHRKYRDG----IDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
+ ++ + + +YP Y G + L+ LL+ IP + +LS G R
Sbjct: 222 LSGLTLIFLLAVATLYPFAI--YSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDR 279
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFAKGVEKEHVILLA 367
++Q I A+E +D L DKTGT+TL N+ + I V GV +E + A
Sbjct: 280 VTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FIPV--PGVSEEELADAA 335
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVH----FLPFNPVDKRTALTYIDSDGNW 423
AS ++ +IV LA ++ F+PF +T ++ +D G
Sbjct: 336 QLAS-LADETPEGRSIV-ELAKKLGIELREDDLQSHAEFVPFT---AQTRMSGVDLPGG- 389
Query: 424 HRASKGAPEQILALCNCRE-DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
KGA + I R + + + A +D+ + G L V
Sbjct: 390 REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG------------- 436
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYP 538
+++G++ L D + E +G+ MITGD AI E G
Sbjct: 437 RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG----------- 485
Query: 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598
VD+ I +A PE K ++++ Q + MTGDG NDA
Sbjct: 486 -----------------VDDFIAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDA 522
Query: 599 PALKKADIGIAVADATDAARSASDIV 624
PAL +AD+G+A+ T AA+ A+++V
Sbjct: 523 PALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 2e-31
Identities = 113/444 (25%), Positives = 191/444 (43%), Gaps = 73/444 (16%)
Query: 351 IEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDK 410
I VFAK + H L N++ + + E PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAE---FPFDSEIK 538
Query: 411 RTALTYIDSDGNWHRA-SKGAPEQILALCNC----------------REDVRKKVHAVID 453
R A Y D+ G + +KGA E+I+ C+ RE + + ++
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESL-- 596
Query: 454 KFAERGLRSLGVARQEI---------------PEKTKESPGAPWQLVGLLPLFDPPRHDS 498
A GLR L A + T ES + +GL+ ++DPPR++S
Sbjct: 597 --AAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNES 651
Query: 499 AETIRRALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSSS-------LLGQDKDAS 550
A + + G+NV M+TGD K + +G + N + G DA
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA- 710
Query: 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610
++ VD+L A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 711 LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 611 A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669
+ +D A+ ASDIVL++ + I++A+ R +F + + ++ ++ + + ++I
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAI-LLIIG 829
Query: 670 LIWK-------FDFSPFMVL-IIAILNDGTIMTISKDRVKPS----PQPDS------WKL 711
L ++ F SP +L I I + M + ++ P D+ +L
Sbjct: 830 LAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKEL 889
Query: 712 -KEIFATGVVLG-SYLAIMTVVFF 733
++FA G LG S LA T + +
Sbjct: 890 IIDMFAYGFFLGGSCLASFTGILY 913
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 6e-29
Identities = 152/528 (28%), Positives = 227/528 (42%), Gaps = 91/528 (17%)
Query: 128 ALMANLAPKTKV-LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
ALMA L P+T LRDG E + L PGDVI + G +PAD +LL D+SAL
Sbjct: 236 ALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESAL 293
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ--------V 238
TGES+PV + ++V +G+T + V++ + + HL++ + +
Sbjct: 294 TGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFI 353
Query: 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVL 298
F ++ T + ++ V +V ++ P Q YR L +LLI G P A+ V+
Sbjct: 354 DRFSRIYTPA--IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--VI 404
Query: 299 SVTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK 356
S AI S +++GA+ K A+E++ + + DKTGTLT K V I
Sbjct: 405 STPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTD--IHPAT- 461
Query: 357 GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL-- 414
G+ + ++ LAA A++ LA A VR L + + AL
Sbjct: 462 GISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRALAG 509
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474
+ I+ N R AP K+ + D FA + + E KT
Sbjct: 510 SGIEGQVNGERVLICAPG--------------KLPPLADAFAGQ------INELESAGKT 549
Query: 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534
++GL+ L D R D+ + I LG+ M+TGD
Sbjct: 550 VVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDN--------------- 594
Query: 535 NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594
P ++ A+IA EL D AG+ PE K + V L + + M GDG
Sbjct: 595 ---PRAA-------AAIAG----EL--GIDFRAGLLPEDKVKAVTELNQHAPL-AMVGDG 637
Query: 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 642
+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 638 INDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 7e-28
Identities = 133/606 (21%), Positives = 255/606 (42%), Gaps = 84/606 (13%)
Query: 72 NPLSWVMEAAAIMAIALA--------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123
NP+ +V+E ++A+ L R + F+ +++ LV + + E
Sbjct: 32 NPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGK 91
Query: 124 NAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 181
A AL ++ +DG + DAS L G ++ + G+ +P D ++++G +
Sbjct: 92 AQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATV 150
Query: 182 DQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 238
D+SA+TGES PV K +D V G++ +E + + H+F K LV+ +
Sbjct: 151 DESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATR- 209
Query: 239 GHFQKVLTAIGNFCIC-SIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPIAMPT 296
+K I F + ++ + + I+ MYP+ + + I L+ L + IP +
Sbjct: 210 ---KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGG 266
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFA 355
+LS G R++Q + K ++E ++VL DKTGT+T N++ I V +
Sbjct: 267 LLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA--FIPVKS 324
Query: 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415
E+ L+ A + D + + LA + ++PF + + +
Sbjct: 325 SSFER----LVKAAYESSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVK 380
Query: 416 YIDSDGNWHRASKGAPEQILA-LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474
+ + KGAP ++ + + + A++ +++G L V
Sbjct: 381 FTTRE-----VYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNE---- 431
Query: 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QL---AIGKETGRRL 530
++G++ L D + E R +G+ M TGD +L I KE G
Sbjct: 432 ---------ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG--- 479
Query: 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
VD + + PE K +++ Q + HI M
Sbjct: 480 -------------------------VDRFVAECK------PEDKINVIREEQAKGHIVAM 508
Query: 591 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 650
TGDG NDAPAL +A++G+A+ T +A+ A++++ + + ++ VL + + +
Sbjct: 509 TGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSL 568
Query: 651 TIYAVS 656
T ++++
Sbjct: 569 TTFSIA 574
|
Length = 673 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-26
Identities = 139/581 (23%), Positives = 233/581 (40%), Gaps = 89/581 (15%)
Query: 70 MWNPLSWVMEAAAIM----AIALANGGGRDPDWQDFVGII--VLLVINSTISFIEENNAG 123
NP+ +++ +++ IA A+ G + F II +L + +F E G
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 124 NAAAALMANLAPKTK-------VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176
A A+ TK + DG + A L GD++ ++ GD++P D ++EG
Sbjct: 90 RGKA--QADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG 147
Query: 177 DPLKIDQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233
+D+SA+TGES PV K + V G+ + A TF + LV+
Sbjct: 148 VA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVE 206
Query: 234 STNQVGHFQKVLTAIG-NFCICSIAVGIVAEIIIMYPVQHRKYRD---GIDNLLVLLIGG 289
+ +K I + ++ + + ++P Y + L+ LL+
Sbjct: 207 GAQR----RKTPNEIALTILLIALTLVFLLVTATLWPFAA--YGGNAISVTVLVALLVCL 260
Query: 290 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDR 348
IP + +LS G R+ I A+E +D L DKTGT+TL N+L +
Sbjct: 261 IPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF 320
Query: 349 NLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408
+ A+GV+++ + A AS + D + + +LA R + F
Sbjct: 321 ----IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEF 374
Query: 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDV-RKKVHAVIDKFAERGLRSLGVAR 467
+T ++ I+ D N KGA + I + +D+ A +G L V
Sbjct: 375 TAQTRMSGINLD-NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE 433
Query: 468 QEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIG 523
++ G++ L D + E + +G+ MITGD AI
Sbjct: 434 DN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480
Query: 524 KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE 583
E G VD+ I +A PE K ++++ Q
Sbjct: 481 AEAG----------------------------VDDFIAEAT------PEDKIALIRQEQA 506
Query: 584 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 507 EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 4e-26
Identities = 134/537 (24%), Positives = 207/537 (38%), Gaps = 148/537 (27%)
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
K+ G E A+ L GD++ ++ G+I+PAD ++EG +D+SA+TGES PV +
Sbjct: 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 198 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK----------- 243
+ V G+ I + A +F + LV+ + QK
Sbjct: 167 GGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKR----QKTPNEIALTILL 222
Query: 244 -VLTAIGNFCIC-------SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP 295
LT I F + + G I + L+ LL+ IP +
Sbjct: 223 AGLTII--FLLVVATLPPFAAYSGGALSITV---------------LVALLVCLIPTTIG 265
Query: 296 TVLSVTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLI 351
+LS AIG R+ Q I A+E +D L DKTGT+TL N+ +
Sbjct: 266 GLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE---- 318
Query: 352 EVF--AKGVEKEHVILLAARASRTENQDAIDAAIVGMLADP-----------------KE 392
F GV +E + DAA + LAD +E
Sbjct: 319 --FLPVPGVTEE---------------ELADAAQLSSLADETPEGRSIVVLAKQRFNLRE 361
Query: 393 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAV 451
F+PF+ +T ++ +D DG KGA + I ++ A
Sbjct: 362 RDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRRYVESNGGHFPAELDAA 416
Query: 452 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN 511
+D+ A +G L VA +++G++ L D + E +G+
Sbjct: 417 VDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIK 463
Query: 512 VKMITGD-QL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567
MITGD L AI E G VD+ + +A
Sbjct: 464 TVMITGDNPLTAAAIAAEAG----------------------------VDDFLAEAT--- 492
Query: 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
PE K ++++ Q + MTGDG NDAPAL +AD+G+A+ T AA+ A ++V
Sbjct: 493 ---PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 8e-19
Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYP 538
+ LL + DP R DS ++R G + M+TGD AI KE G
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG----------- 688
Query: 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598
+DE+I AGV P+ K E +KRLQ + M GDG+NDA
Sbjct: 689 -----------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725
Query: 599 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
PAL +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 726 PALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 1e-17
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 16 SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEE-KKESKVLKFLGFMWNP 73
+D + +EEV E+L+ E GL+S+E A RL +GPN+L KK S +L+FL NP
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 74 LSWVMEAAAIMAIAL 88
L +++ AAA+++ L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 1e-13
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 21 RIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVM 78
+ +EEV +L E GLT E RL +GPN+L E+K +S FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 79 EAAAIMA 85
AAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 3e-08
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEA 214
PG ++ + GD VP D + +G+ +D++ LTGE +P K D V +G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 215 VVIATGVHTFFGKAAHLV----DSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMY-- 268
A G HT + +V S ++G ++A+ F + + +V+ I +
Sbjct: 402 RASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV--FVPVVVVIALVSAAIWYFFG 459
Query: 269 PVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSQQGAITKRMTAIEE 324
P Y LV+ + IA P L + M+I G R ++ G + + A++
Sbjct: 460 PAPQIVYT------LVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQR 513
Query: 325 MAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
+ +D L DKTGTLT K V ++ F GV++ + LAA
Sbjct: 514 ASTLDTLVFDKTGTLTEGKPQVVA--VKTFN-GVDEAQALRLAA 554
|
Length = 834 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-07
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
A +PV+ + FAG PE K +I++ L++R M G+G ND AL++AD+GI
Sbjct: 63 AEFVGIPVERV------FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI 116
Query: 609 AV---ADATDAARSASDIVLTEPGLSVIISA 636
+ +D+VL E + +
Sbjct: 117 CTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 3e-07
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 19/123 (15%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
++GL+ L DP + E ++ G+ + ++TGD R LG+ +
Sbjct: 84 VVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALV----- 138
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
P ++ E A ++ L + M GDGVND PA K
Sbjct: 139 SADLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAK 184
Query: 603 KAD 605
A
Sbjct: 185 AAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 6e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 557 DELIEKADGFAG------VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADI 606
+ L + G V +K + + L ++ I GDG ND +K A +
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189
Query: 607 GIAVADATDAARSASDIVLTEPGLSVIIS 635
GIA +A + +DI + + L+ I+
Sbjct: 190 GIAF-NAKPKLQQKADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.004
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHICG---MT-GDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K +K L + I + GDG ND L+ A +G+A+ +A+ ++A+D V
Sbjct: 186 SKGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.004
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 377 DAIDAAIVG----MLADPKEARAGVREVHFLPFNPVDKR-TALTYIDSDGNWHRASKGAP 431
D ++A++ + D +E RA V +PFN KR + + ++ D + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 432 EQILALCN 439
E+IL C+
Sbjct: 82 ERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K ++ L E I GDG+ND L+ A G+A+ +A + ++ +D V
Sbjct: 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 883 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.92 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.67 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.56 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.39 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.39 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.07 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.94 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.94 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.92 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.87 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.87 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.85 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.82 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.82 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.81 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.8 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.8 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.79 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.73 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.7 | |
| PLN02887 | 580 | hydrolase family protein | 98.64 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.64 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.63 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.53 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.52 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.49 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.48 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.45 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.44 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.42 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.4 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.35 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.32 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.27 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.15 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.14 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.06 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.02 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.0 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.9 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.89 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.87 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.84 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.71 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.71 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.62 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.62 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.57 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.45 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.44 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.39 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.39 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.35 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.19 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.1 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.05 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.01 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.01 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.96 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.95 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.94 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.94 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.9 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.88 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.81 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.69 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.68 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.67 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.6 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.6 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.42 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.38 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.35 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.35 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.34 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.26 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.25 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.19 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.18 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.95 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.94 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.88 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.86 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.83 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.83 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.46 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.45 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.42 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.37 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.35 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.25 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.13 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.12 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.08 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.01 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.91 | |
| PLN02940 | 382 | riboflavin kinase | 94.82 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.79 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.72 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.32 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.09 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.05 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.87 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.78 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.67 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.66 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.55 | |
| PLN02811 | 220 | hydrolase | 93.27 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 93.26 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.96 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 92.63 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 92.63 | |
| PLN03017 | 366 | trehalose-phosphatase | 92.42 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.29 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.74 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 91.63 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 91.56 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 91.05 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 90.8 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 90.79 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.48 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 89.0 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 88.95 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 87.99 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.24 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 86.11 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 85.55 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 84.88 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 82.95 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 82.6 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 81.92 | |
| PLN02151 | 354 | trehalose-phosphatase | 81.1 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-144 Score=1208.33 Aligned_cols=823 Identities=29% Similarity=0.419 Sum_probs=681.1
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcc-cccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 002765 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEK-KESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (883)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~ 95 (883)
+.|..+.+|+++.+.++ ++|||++|+.+|+++||+|+++.. ..+.|+++++||.|++..+|+++|++||++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 46678999999999999 789999999999999999999965 5889999999999999999999999999997
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEe
Q 002765 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (883)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~ 175 (883)
.|.+++.|.+++++|+.++++||||++|++++|+++.|+.++|+|+|+.+.++++||||||||.|+-||+||||.||++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCC--------------CCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCc
Q 002765 176 GDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 240 (883)
Q Consensus 176 g~~l~Vdes~LTGEs~pv~K~~--------------~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~ 240 (883)
..++.||||+|||||.||.|.. .|++|+||.|..|.++|+|+.||.+|++|++.+.+++.+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999954 257999999999999999999999999999999998876 6999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--hhhc---c-c---cchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhc
Q 002765 241 FQKVLTAIGNFCICSIAVGIVAEIII--MYPV---Q-H---RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (883)
Q Consensus 241 ~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~ 311 (883)
+|+.++.+++.+.-.+.+.++..+++ .|+. . + ..+.+.+..++++.+++||+|||+++++++++|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999988652322222222322 2221 1 2 345567888999999999999999999999999999999
Q ss_pred cCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc-----------cCC------------------ChH-
Q 002765 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-----------KGV------------------EKE- 361 (883)
Q Consensus 312 ~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-----------~~~------------------~~~- 361 (883)
++++||++.++|+||.+++||+|||||||+|+|++.++++.... .++ ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999997752110 000 111
Q ss_pred --HHHHHHHHhccc------c-----CCChHHHHHHHhcC-----Chh---h-----------hhcCceEEEeecCCCcC
Q 002765 362 --HVILLAARASRT------E-----NQDAIDAAIVGMLA-----DPK---E-----------ARAGVREVHFLPFNPVD 409 (883)
Q Consensus 362 --~~l~~~~~~~~~------~-----~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~~f~s~~ 409 (883)
+++..++.|... . .++|+|.|+...+. +.. . ....++...++||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 233333333211 1 35788888876542 111 0 11223455899999999
Q ss_pred ccEEEEEEcCCCc--EEEEEcCChHHHHHhccC------------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCC-C-
Q 002765 410 KRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPE-K- 473 (883)
Q Consensus 410 k~~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~-~- 473 (883)
|+|++.+.+..++ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|+|||++|+++.+. .
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999866554 789999999999999953 34568889999999999999999999997763 1
Q ss_pred ---------CCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC--CCCcc
Q 002765 474 ---------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL 542 (883)
Q Consensus 474 ---------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~--~~~~~ 542 (883)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|+|||+.+||.+||+++|+..+.. ....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 1345789999999999999999999999999999999999999999999999999999875432 33455
Q ss_pred cCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHHhcc
Q 002765 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 621 (883)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aa 621 (883)
+|.+. +.++++++++...+..+|+|++|++|.+||++||++|++|+|+|||+||+||||.|||||||| +|+|+||+||
T Consensus 636 TG~ef-D~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEF-DDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhh-hcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 66554 488999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhccCccHHHHHHHHHhhhhh-hhccccCC
Q 002765 622 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILNDGT-IMTISKDR 699 (883)
Q Consensus 622 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~ 699 (883)
|+||.||||++|+.||++||.+|+|||+|+.|++++|++.+..+++ ..+..|.|+.|+|+||+|+++|++ ++++++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 9999999999999999999999999999999999999987666544 566689999999999999999997 69999999
Q ss_pred CCCC---CCCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc----------C-C-----Chh
Q 002765 700 VKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------R-T-----RPD 756 (883)
Q Consensus 700 ~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~-~-----~~~ 756 (883)
+++. ++|+++ ....++..++..|.++.++++..|++.+... .....+... . . ...
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~ 872 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDM 872 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhccc
Confidence 8764 223322 2345566667779888888876554433210 100000000 0 0 001
Q ss_pred hHHHHHHHHHHHHHHHHhhhhccCCCCccc---CchHHHHHHHHHHHHHHHHHHHhhc--cccccccccchhHHHHHHHH
Q 002765 757 EMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLY 831 (883)
Q Consensus 757 ~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 831 (883)
...|++|..+++...++.+++|+.+.+.+. +.|.|+++++.++++.. +..+|.+ ...+++.+++|.-|++.+.+
T Consensus 873 ~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~-f~ilYvp~l~~iFq~~~l~~~ew~~vl~~ 951 (972)
T KOG0202|consen 873 CPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLH-FLVLYVPPLQRIFQTEPLSLAEWLLVLAI 951 (972)
T ss_pred ccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhh-heEEEechhhhhheecCCcHHHHHHHHHH
Confidence 123788888999999999999998754322 23558888988877664 4446654 23467888888877777899
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 002765 832 SLVTYFPLDILKFGIRYILS 851 (883)
Q Consensus 832 ~~~~~~~~~~~K~~~~~~~~ 851 (883)
+..+++++|++|++.|+++.
T Consensus 952 s~~V~i~dEilK~~~R~~~~ 971 (972)
T KOG0202|consen 952 SSPVIIVDEILKFIARNYFK 971 (972)
T ss_pred hhhhhhHHHHHHHHHHhccC
Confidence 99999999999999998753
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-143 Score=1160.56 Aligned_cols=862 Identities=86% Similarity=1.308 Sum_probs=828.6
Q ss_pred hhhhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002765 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (883)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 88 (883)
+++.+.|..+....+.||+.+.|.+...|||++|+++|+++||+|++++++.+.+.+|+..||+|+.|++..+|++.+.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 78888888889999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeec
Q 002765 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVP 168 (883)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vP 168 (883)
..+++.+++|.++..|..++++|+.++|+||+++.++.++|++.+.++++|+|||+|.++++++||||||+.++.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCCCCCcHHHHHHHH
Q 002765 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (883)
Q Consensus 169 aD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~i 248 (883)
||+||++|+.++||+|+|||||.||.|++||.+|+||+|.+|++.++|++||.+|..||.+++++++++..+||+.++.+
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCe
Q 002765 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328 (883)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v 328 (883)
+.++++.+++++++.+.++|..+.+.+...+.+.+.+++..+|.++|.++++++++|+.||+++|+++|+++++|+|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999999889999988899999999999899999999999999999999999999999999999999999999
Q ss_pred eEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCc
Q 002765 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408 (883)
Q Consensus 329 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~ 408 (883)
|++|+|||||||.|+++|.+..++.+.++.++++++..|+++++.+++|.+|.|+++.+.||.+.+.+|+.++++|||+.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999777778889999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEee
Q 002765 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488 (883)
Q Consensus 409 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i 488 (883)
.||.+..+.++||+.+.++|||||.|++.|+.+.+.++++++.+++|+++|+|.+++|++..++..++.....+.|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
-+-||||.++.++|.+....|++|.|+|||....++..++++|+.++.+++..+.|...++.+...+.++++++.+-||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred eCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHH
Q 002765 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648 (883)
Q Consensus 569 ~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~ 648 (883)
+.|+||+++|+.||+++|.|+|+|||+||+|+||+||+|||+.+++|+|+.+||+|++++.++.|+.++..+|.+|+|++
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCccHHHHHHHHHhhhhhhhccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 002765 649 NYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728 (883)
Q Consensus 649 ~~i~~~l~~ni~~~~~~~~~~~~~~~~l~~~~il~i~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 728 (883)
.|..|+++..+-+++.++...+.|.+.|+|+.++++.+++|.+.|+++.|+.+|+|.|.+|+.+.+|..++++|.++++.
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHH
Q 002765 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (883)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (883)
+..+||..+.+.+++..||.........+.....|+.+++..+..+|.+|++.|+|..+|.++++.+++.+.++++++.+
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliav 807 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAV 807 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988988766666677777889999999999999999999999999999999999999999999999
Q ss_pred hhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccCCcc
Q 002765 809 YANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKVNCIGKTY 870 (883)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (883)
|.+|.+.....+.|.|...+|++++..+.+.++.|...|.....+.|....+.+..++.|++
T Consensus 808 ya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~ 869 (942)
T KOG0205|consen 808 YANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKD 869 (942)
T ss_pred HheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccc
Confidence 99999999999999999999999999999999999999988888888888888775555443
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-132 Score=1201.13 Aligned_cols=752 Identities=60% Similarity=0.946 Sum_probs=670.8
Q ss_pred CCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002765 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISF 116 (883)
Q Consensus 37 GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~ 116 (883)
|||++|+++|+++||+|++++++++.|+.|+++|++|++++|+++++++++++ +|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999887888999999999999999999999999986 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecC
Q 002765 117 IEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196 (883)
Q Consensus 117 ~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~ 196 (883)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|+
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999976999999999999999999
Q ss_pred CCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccch
Q 002765 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275 (883)
Q Consensus 197 ~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 275 (883)
++|.+|+||.|.+|+++++|++||.+|++|+|.+++++++ +++++|+.+++++++++..+++.+++.+++.+...+.+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998876 678999999999988665444433333333332246788
Q ss_pred HhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc
Q 002765 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA 355 (883)
Q Consensus 276 ~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 355 (883)
.+++.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999998764 22
Q ss_pred cCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEEEEEcCC-CcEEEEEcCChHHH
Q 002765 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQI 434 (883)
Q Consensus 356 ~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~-g~~~~~~KGa~e~i 434 (883)
.+.++++++.+++.++...++||+|.|+++++.+....+..++..+++||++.+|+|++++.+.+ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23567778888887765566799999999987655444567888999999999999999887654 77788999999999
Q ss_pred HHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEE
Q 002765 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514 (883)
Q Consensus 435 l~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~m 514 (883)
+++|++.++.++++++.+++++++|+|++++|+++ .|++|+|+|+++++||||||++++|++||++||+++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888889999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCC
Q 002765 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594 (883)
Q Consensus 515 lTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG 594 (883)
+||||+.||.++|+++||..+......+....+.+.++++++++.+++.++|||++|+||.++|+.+|++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976443333343334445778889999999999999999999999999999999999999999
Q ss_pred ccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 002765 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF 674 (883)
Q Consensus 595 ~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~ 674 (883)
+||+|||++|||||||++|+|+||++||+||++|+|++|+.++++||++|+||+|++.|.++.|+..++.++...+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777776666778
Q ss_pred CccHHHHHHHHHhhhhhhhccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Q 002765 675 DFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754 (883)
Q Consensus 675 ~l~~~~il~i~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 754 (883)
+++|+|++|+|+++|++++++++|+++|+++|++|...+++.+++..|+++++.++.+||+.+...++...++ ....
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG---LQLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc---cccc
Confidence 8999999999999999899999999999999999999999999999999999998887777664221111111 1113
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHH
Q 002765 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (883)
Q Consensus 755 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (883)
..+.+|++|+.+++.|+++++++|+++.+|+++|++++++++++..++.+++..
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 457899999999999999999999999889999999999999988887766643
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-132 Score=1209.82 Aligned_cols=806 Identities=27% Similarity=0.408 Sum_probs=673.0
Q ss_pred cccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCc
Q 002765 19 LERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPD 97 (883)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~ 97 (883)
.+.++.+++++.|+++.+|||++|+++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++ +
T Consensus 49 ~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~-------~ 121 (902)
T PRK10517 49 AAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE-------D 121 (902)
T ss_pred HHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------c
Confidence 457799999999999999999999999999999999998764 57889999999999999999999999976 8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC------CeEEEeecCCCCCCcEEEEeCCCeeccce
Q 002765 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIVPADA 171 (883)
Q Consensus 98 ~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~ 171 (883)
|.++++|+++++++..++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+|||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg 201 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADL 201 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeE
Confidence 999999999999999999999999999999999999999999999 78999999999999999999999999999
Q ss_pred EEEecCCeEEEeccccCCCcceecCCCC-------------CccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-C
Q 002765 172 RLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-Q 237 (883)
Q Consensus 172 ~ll~g~~l~Vdes~LTGEs~pv~K~~~~-------------~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~ 237 (883)
+|++|+++.||||+|||||.||.|++++ ++|+||.|.+|+++++|++||.+|++|+|++++++++ +
T Consensus 202 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~ 281 (902)
T PRK10517 202 RILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSE 281 (902)
T ss_pred EEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCC
Confidence 9999988999999999999999998874 7999999999999999999999999999999998764 7
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccc
Q 002765 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (883)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (883)
++++|+.++++++++....++...+. ++.+.....+|.+++..++++++++|||+||++++++++.|+++|+|+|+++|
T Consensus 282 ~t~lq~~~~~i~~~l~~~~~~~~~~v-~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk 360 (902)
T PRK10517 282 PNAFQQGISRVSWLLIRFMLVMAPVV-LLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK 360 (902)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 89999999999887554433322222 22222334578889999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccc--cCCChHHHHHHHhcCCh--hhh
Q 002765 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KEA 393 (883)
Q Consensus 318 ~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 393 (883)
+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++.. ..+||+|.|++.++... ...
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~ 437 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSL 437 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhh
Confidence 9999999999999999999999999999987631 1234456677777665432 24699999999876532 223
Q ss_pred hcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC----------ChhHHHHHHHHHHHHHHccCeEE
Q 002765 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSL 463 (883)
Q Consensus 394 ~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 463 (883)
...++.++++||+|.+|+|++++++.++.+.+++||+||.++++|+. +++.++.+.+..++++++|+|++
T Consensus 438 ~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 517 (902)
T PRK10517 438 ASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVV 517 (902)
T ss_pred hhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 45678899999999999999988766777889999999999999963 22345667788899999999999
Q ss_pred EEEeeccCCCCC---CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCC
Q 002765 464 GVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (883)
Q Consensus 464 ~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~ 540 (883)
++||++++..+. ...|++++|+|+++|+||||||++++|++||++||+|+|+||||+.||.++|+++||.. ..
T Consensus 518 avA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~ 593 (902)
T PRK10517 518 AVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GE 593 (902)
T ss_pred EEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cC
Confidence 999998754321 12477999999999999999999999999999999999999999999999999999953 23
Q ss_pred cccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhc
Q 002765 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 620 (883)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~a 620 (883)
.++|.+. +.++++++++.+++..+|||++|+||.++|+.+|++|++|+|+|||+||+||||+||||||||+|+|+||++
T Consensus 594 v~~G~el-~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkea 672 (902)
T PRK10517 594 VLIGSDI-ETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREA 672 (902)
T ss_pred ceeHHHH-HhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHh
Confidence 4555544 478899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCccHHHHHHHHHhhhhhhhccccCC
Q 002765 621 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKDR 699 (883)
Q Consensus 621 ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~l~~~~il~i~l~~~~~~~~l~~~~ 699 (883)
||+||+||+|++|++++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|.+++++++|+
T Consensus 673 ADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d~ 752 (902)
T PRK10517 673 ADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDN 752 (902)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCCC
Confidence 99999999999999999999999999999999999999998887777666666 69999999999999998789999999
Q ss_pred CCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHHHHHHhhhh
Q 002765 700 VKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVT 777 (883)
Q Consensus 700 ~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~ 777 (883)
+++.. +|++|+...+...++..|++++++++..|+++++. +|... .......++..|+.++++|.++++++
T Consensus 753 ~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~~ 825 (902)
T PRK10517 753 VDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHMI 825 (902)
T ss_pred CChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHhh
Confidence 98873 67778777777878888998887777666654321 11110 00112355677999999999999999
Q ss_pred ccCC-CCcccCchHHHHHHHHHHHHHHHHHHHhhc-cccccccccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002765 778 RSRS-WSFIERPGLLLATAFVIAQLVATFIAVYAN-WSFARIEGCG--WGWAGVIWLYSLVTYFPLDILKFGIRYIL 850 (883)
Q Consensus 778 r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 850 (883)
|+++ ++|.+++.+..+++.++..++..++ .|.+ ...+.+.+++ +..|++++.++.. ++.|+.|....+.+
T Consensus 826 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~ 899 (902)
T PRK10517 826 RTRRIPFIQSRAAWPLMIMTLIVMAVGIAL-PFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRY 899 (902)
T ss_pred ccCCCCcccchHHHHHHHHHHHHHHHHHHh-hHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 9987 4444333333332222222222222 2112 2345677777 4444443443333 66788887765554
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-132 Score=1224.04 Aligned_cols=821 Identities=26% Similarity=0.393 Sum_probs=671.2
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC
Q 002765 16 SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGG 93 (883)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~ 93 (883)
-.+||.++.+|+++.|+++ .+|||++||++|+++||+|+++.++ .+.|+.|++||++|+.++|+++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 3569999999999999998 5899999999999999999999875 678999999999999999999999999986
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEE
Q 002765 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (883)
Q Consensus 94 ~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~l 173 (883)
+|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEeccccCCCcceecCCC---------------CCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC--
Q 002765 174 LEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-- 236 (883)
Q Consensus 174 l~g~~l~Vdes~LTGEs~pv~K~~~---------------~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-- 236 (883)
++++++.||||+|||||.||.|.+. |++|+||.|.+|++.++|++||.+|++|||++++++.+
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998899999999999999999642 57899999999999999999999999999999885432
Q ss_pred ----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHH
Q 002765 237 ----------------------------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL 282 (883)
Q Consensus 237 ----------------------------------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (883)
.++|+|+.++++++++..+.++..++.++..+ . ..+...+.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~--~-~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK--F-DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--h-hhhHHHHHHH
Confidence 13899999999988754433332222111111 1 1234667788
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeec---c-----
Q 002765 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV---F----- 354 (883)
Q Consensus 283 ~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~---~----- 354 (883)
++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+++... +
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999876421 0
Q ss_pred ccCC-----------------------------------------C-------hHHHHHHHHHhccc------------c
Q 002765 355 AKGV-----------------------------------------E-------KEHVILLAARASRT------------E 374 (883)
Q Consensus 355 ~~~~-----------------------------------------~-------~~~~l~~~~~~~~~------------~ 374 (883)
..++ . ..+++..++.|+.. .
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 0000 0 01244444444321 1
Q ss_pred CCChHHHHHHHhcCCh----------hhh-------------------hcCceEEEeecCCCcCccEEEEEEcCCC-cEE
Q 002765 375 NQDAIDAAIVGMLADP----------KEA-------------------RAGVREVHFLPFNPVDKRTALTYIDSDG-NWH 424 (883)
Q Consensus 375 ~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~~~~~~f~s~~k~~sv~~~~~~g-~~~ 424 (883)
.+||+|.|++.++... .+. ...|++++++||+|.+|||++++++.++ +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 2599999998875311 011 2347889999999999999999986544 478
Q ss_pred EEEcCChHHHHHhccC------------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCC------------CCCCCC
Q 002765 425 RASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------------KESPGA 480 (883)
Q Consensus 425 ~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~------------~~~~e~ 480 (883)
+++|||||.|+++|+. +++.++.+.+.+++|+++|+||+++||+++++.+ ++..|+
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 9999999999999963 2334677888899999999999999999876431 234688
Q ss_pred CceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC--------CCCcccCcccccccC
Q 002765 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSSLLGQDKDASIA 552 (883)
Q Consensus 481 ~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~--------~~~~~~~~~~~~~~~ 552 (883)
+|+|+|+++++||||+|++++|++||++||+|+|+||||+.||.++|+++||..+.. ....++|.+. +.++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l-~~l~ 712 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQF-DALS 712 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHh-hhcC
Confidence 999999999999999999999999999999999999999999999999999964311 1123444433 4677
Q ss_pred cchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCch
Q 002765 553 ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 631 (883)
Q Consensus 553 ~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~ 631 (883)
++++++..++..||||++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||+++.+|+|+
T Consensus 713 ~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFA 792 (1053)
T ss_pred HHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHH
Confidence 88899999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------ccCccHHHHHHHHHhhhhh-hhccccCCCCCC-
Q 002765 632 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS- 703 (883)
Q Consensus 632 ~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~------~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~- 703 (883)
+|+.++++||++|+|++|++.|.+++|+..++.++++.++. ++||+|+|++|+|+++|.+ ++++++|++++.
T Consensus 793 ~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~ 872 (1053)
T TIGR01523 793 SILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDL 872 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhH
Confidence 99999999999999999999999999998887776655542 3789999999999999975 799999987654
Q ss_pred ----CCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc-----ccccC-CChhhHHHHHHHHHHHHHH
Q 002765 704 ----PQPD--SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFG-----VRSLR-TRPDEMMAALYLQVSIISQ 771 (883)
Q Consensus 704 ----~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~-~~~~~~~t~~f~~~~~~~~ 771 (883)
|+++ +...++++..++..|++++++++..|++.++. +..+..+ ....+ ....+++|++|.+++++++
T Consensus 873 m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~ 951 (1053)
T TIGR01523 873 MDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCAL 951 (1053)
T ss_pred HhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCccccccccccccccccchhhhHHHHHHHHHHHHH
Confidence 2221 22334566667788999988888766544321 0000000 00000 1245678999999999999
Q ss_pred HHhhhhccCCCCccc------------------CchHHHHHHHHHHHHHHHHHHHhhc-c--ccccccccchhHHHHHHH
Q 002765 772 ALIFVTRSRSWSFIE------------------RPGLLLATAFVIAQLVATFIAVYAN-W--SFARIEGCGWGWAGVIWL 830 (883)
Q Consensus 772 ~~~~~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 830 (883)
++++++|+.+.+.+. ..|+++++++++++++. ++.+|.| . ..+.+.|++|.|++ +++
T Consensus 952 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~~~~~p~~~~~~f~~~~l~~~w~~-~~~ 1029 (1053)
T TIGR01523 952 ILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSA-FPTIYIPVINDDVFKHKPIGAEWGL-AAA 1029 (1053)
T ss_pred HHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHH-HHHHhhhhhhhhhhccCCcchHHHH-HHH
Confidence 999999997633211 24567888887776664 3445544 2 25678888886554 578
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 002765 831 YSLVTYFPLDILKFGIRYIL 850 (883)
Q Consensus 831 ~~~~~~~~~~~~K~~~~~~~ 850 (883)
++++++++.|++|++.|++.
T Consensus 1030 ~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1030 ATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 88888999999999877653
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-131 Score=1208.36 Aligned_cols=813 Identities=27% Similarity=0.428 Sum_probs=674.1
Q ss_pred cccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CC
Q 002765 19 LERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG----GG 93 (883)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~----~~ 93 (883)
.|..+.+|+++.|+++.+|||++|+++|+++||+|+++.++ +++|+.|++||++|+.++|+++++++++++.. .+
T Consensus 27 ~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 27 EAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred HHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 46889999999999999999999999999999999999766 66889999999999999999999999997521 12
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECC------eEEEeecCCCCCCcEEEEeCCCee
Q 002765 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG------RWSEQDASILVPGDVISIKLGDIV 167 (883)
Q Consensus 94 ~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg------~~~~I~~~~Lv~GDiv~l~~Gd~v 167 (883)
...+|.++++|+++++++..++++||+++++++++|+++.+++++|+||| ++++|+++||||||+|.|++||+|
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 23579999999999999999999999999999999999999999999994 899999999999999999999999
Q ss_pred ccceEEEecCCeEEEeccccCCCcceecCC-----------------------CCCccccceeecceEEEEEEEecchhh
Q 002765 168 PADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------YDEVFSGSTCKQGEIEAVVIATGVHTF 224 (883)
Q Consensus 168 PaD~~ll~g~~l~Vdes~LTGEs~pv~K~~-----------------------~~~v~aGt~v~~G~~~~~V~~tG~~T~ 224 (883)
||||+|++|+++.||||+|||||.|+.|++ +|++|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999889999999999999999975 268999999999999999999999999
Q ss_pred hhhhhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002765 225 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (883)
Q Consensus 225 ~g~i~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~ 304 (883)
+|||.+++++.+.++++++.++++++.+..+..+.+.+ +++.......+|.+++.+++++++++|||+||++++++++.
T Consensus 267 ~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~-v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~ 345 (903)
T PRK15122 267 FGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPV-VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAK 345 (903)
T ss_pred hhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 99999999886677899999999887654332221111 11222223457888999999999999999999999999999
Q ss_pred HHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccc--cCCChHHHH
Q 002765 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAA 382 (883)
Q Consensus 305 ~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a 382 (883)
|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+. ..+.++++++.+++.++.+ ..+||+|.|
T Consensus 346 g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~A 422 (903)
T PRK15122 346 GAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQA 422 (903)
T ss_pred HHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHH
Confidence 99999999999999999999999999999999999999999998652 2233456677766654332 246999999
Q ss_pred HHHhcCCh--hhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC----------ChhHHHHHHH
Q 002765 383 IVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHA 450 (883)
Q Consensus 383 i~~~~~~~--~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~ 450 (883)
++.++... ......++.++++||++.+|+|++++++.+|+++.++|||||.++++|+. +++.++++.+
T Consensus 423 ll~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 502 (903)
T PRK15122 423 VVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLA 502 (903)
T ss_pred HHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHH
Confidence 99887532 12234678899999999999999998877788899999999999999963 2334567788
Q ss_pred HHHHHHHccCeEEEEEeeccCCCC-----CCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHH
Q 002765 451 VIDKFAERGLRSLGVARQEIPEKT-----KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE 525 (883)
Q Consensus 451 ~~~~~~~~G~r~l~~A~~~~~~~~-----~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ 525 (883)
..++++++|+|++++||++++..+ .+..|++++|+|+++++||||||++++|++||++||+|+|+||||+.||.+
T Consensus 503 ~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~a 582 (903)
T PRK15122 503 LAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK 582 (903)
T ss_pred HHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 889999999999999999876432 123578999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCC
Q 002765 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (883)
Q Consensus 526 ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Ad 605 (883)
+|+++||.. ...++|.+. +.++++++.+.+++.++|||++|+||.++|+.||++|++|+|+|||+||+||||+||
T Consensus 583 IA~~lGI~~----~~vi~G~el-~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~AD 657 (903)
T PRK15122 583 ICREVGLEP----GEPLLGTEI-EAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD 657 (903)
T ss_pred HHHHcCCCC----CCccchHhh-hhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCC
Confidence 999999953 234555544 478899999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCccHHHHHHH
Q 002765 606 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLII 684 (883)
Q Consensus 606 vGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~l~~~~il~i 684 (883)
||||||+|+|+||++||+||+||||++|+.++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++|+
T Consensus 658 VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~ 737 (903)
T PRK15122 658 VGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQ 737 (903)
T ss_pred EEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988777666555555 79999999999
Q ss_pred HHhhhhhhhccccCCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhhHHHHH
Q 002765 685 AILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAAL 762 (883)
Q Consensus 685 ~l~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~ 762 (883)
|+++|.+++++++|++++.. +|++|+.+.+-..++..|.+.+++++..|++.+.. +. .+. . ......+|.+
T Consensus 738 nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~--~-~~~~~~~t~~ 810 (903)
T PRK15122 738 NLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANS--V-EMQALFQSGW 810 (903)
T ss_pred HHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCc--H-hhhhhhHHHH
Confidence 99999888999999988764 56667655544455566777776666555443211 00 010 0 0012356888
Q ss_pred HHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHHhhc----cccccccccchhHHHHHHHHHHHHHHH
Q 002765 763 YLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYAN----WSFARIEGCGWGWAGVIWLYSLVTYFP 838 (883)
Q Consensus 763 f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (883)
|+.++++|+++++++|+++.++++++ +++.++++++++ +++..|.+ ...+.+.++++..|++++.+++.++++
T Consensus 811 f~~l~~~q~~~~~~~R~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~ 887 (903)
T PRK15122 811 FIEGLLSQTLVVHMLRTQKIPFIQST--AALPVLLTTGLI-MAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLV 887 (903)
T ss_pred HHHHHHHHHHHHHhhCcCCCCcCcch--HHHHHHHHHHHH-HHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874333343 233333322222 22222222 134568888888888878888888888
Q ss_pred HHHHHHHHHHhc
Q 002765 839 LDILKFGIRYIL 850 (883)
Q Consensus 839 ~~~~K~~~~~~~ 850 (883)
.|+.|.+.+|.+
T Consensus 888 ~e~~k~~~~r~~ 899 (903)
T PRK15122 888 AQGMKRFYIRRF 899 (903)
T ss_pred HHHHHHHHhhhc
Confidence 999997665554
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-130 Score=1197.19 Aligned_cols=812 Identities=26% Similarity=0.399 Sum_probs=674.4
Q ss_pred hhhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002765 10 EEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (883)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 88 (883)
++.++- ...|.++.+++++.|+++.+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|++++|+++++++++.
T Consensus 7 ~~~~~~-~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~ 85 (867)
T TIGR01524 7 KQGNNL-LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT 85 (867)
T ss_pred hHHHHH-HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 333433 4457889999999999998999999999999999999999876 56889999999999999999999999987
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE------CCeEEEeecCCCCCCcEEEEe
Q 002765 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIK 162 (883)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r------dg~~~~I~~~~Lv~GDiv~l~ 162 (883)
+ +|.++++|+++++++..++++||+|+++++++|+++.+++++|+| ||++++|+++||||||+|.++
T Consensus 86 ~-------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~ 158 (867)
T TIGR01524 86 D-------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELA 158 (867)
T ss_pred h-------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEEC
Confidence 5 899999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCeeccceEEEecCCeEEEeccccCCCcceecCCCC-------------CccccceeecceEEEEEEEecchhhhhhhh
Q 002765 163 LGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAA 229 (883)
Q Consensus 163 ~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~-------------~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~ 229 (883)
+||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||+.
T Consensus 159 ~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~ 238 (867)
T TIGR01524 159 AGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLA 238 (867)
T ss_pred CCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHH
Confidence 9999999999999977999999999999999998864 699999999999999999999999999999
Q ss_pred hhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHh
Q 002765 230 HLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309 (883)
Q Consensus 230 ~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l 309 (883)
+++++.++++++|+.++++++++....++...+ +++.+.....+|.+++..++++++++|||+||++++++++.|+++|
T Consensus 239 ~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m 317 (867)
T TIGR01524 239 IAATERRGQTAFDKGVKSVSKLLIRFMLVMVPV-VLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM 317 (867)
T ss_pred HHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-heehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 999886678899999999998765444332222 2222223445788899999999999999999999999999999999
Q ss_pred hccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccc--cCCChHHHHHHHhc
Q 002765 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGML 387 (883)
Q Consensus 310 ~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~ 387 (883)
+|+|+++|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++.. ..+||+|.|++.++
T Consensus 318 ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~ 394 (867)
T TIGR01524 318 SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKL 394 (867)
T ss_pred HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 999999999999999999999999999999999999988642 2234456677766654432 23599999999887
Q ss_pred CCh--hhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC----------ChhHHHHHHHHHHHH
Q 002765 388 ADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKF 455 (883)
Q Consensus 388 ~~~--~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~ 455 (883)
.+. ...+..++.++++||+|.+|+|++++++.++.++.++||+||.++++|+. +++.++++.+.++++
T Consensus 395 ~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~ 474 (867)
T TIGR01524 395 DESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEM 474 (867)
T ss_pred HhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHH
Confidence 532 22345678889999999999999998766666789999999999999963 234456788888999
Q ss_pred HHccCeEEEEEeeccCCCCC---CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCC
Q 002765 456 AERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (883)
Q Consensus 456 ~~~G~r~l~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi 532 (883)
+++|+|++++|+++++..+. +..|++|+|+|+++++||||||++++|++||++||+++|+||||+.||.++|+++||
T Consensus 475 a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI 554 (867)
T TIGR01524 475 NRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI 554 (867)
T ss_pred HhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 99999999999998765332 124788999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecC
Q 002765 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (883)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 612 (883)
..+ ..+.|.+. +.++++++.+.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+||||+||||||||+
T Consensus 555 ~~~----~v~~g~~l-~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~ 629 (867)
T TIGR01524 555 DAN----DFLLGADI-EELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDT 629 (867)
T ss_pred CCC----CeeecHhh-hhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCC
Confidence 632 34455443 4678889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCccHHHHHHHHHhhhhh
Q 002765 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGT 691 (883)
Q Consensus 613 ~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~l~~~~il~i~l~~~~~ 691 (883)
|+|+||++||+||+||+|++|+.++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|++
T Consensus 630 gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~ 709 (867)
T TIGR01524 630 AADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFS 709 (867)
T ss_pred ccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988877766655555 799999999999999977
Q ss_pred hhccccCCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHH
Q 002765 692 IMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSII 769 (883)
Q Consensus 692 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~ 769 (883)
++++++|++++.. +|++|+.+.+...++..|++.+++.+..|++++.... .... ......+|..|+.++++
T Consensus 710 ~~al~~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~t~~f~~~~~~ 782 (867)
T TIGR01524 710 QLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------ANTV-EEQALFQSGWFVVGLLS 782 (867)
T ss_pred HHhhcCCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccch-hhhhHHHHHHHHHHHHH
Confidence 8999999988763 5666776767777778888887777665554432110 0000 01234578889999999
Q ss_pred HHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHHhhcc----ccccccccchh--HHHHHHHHHHHHHHHHHHHH
Q 002765 770 SQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANW----SFARIEGCGWG--WAGVIWLYSLVTYFPLDILK 843 (883)
Q Consensus 770 ~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~K 843 (883)
|.++++++|+++..+++|+ +++.++++++++. ++..|.++ ..+.+.++++. .|++++.++. .++.|+.|
T Consensus 783 ~~~~~~~~R~~~~~~~~n~--~~~~~~~~~~~~~-~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~--~~~~e~~k 857 (867)
T TIGR01524 783 QTLVVHMIRTEKIPFIQSR--AAAPVMIATLLVM-ALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY--MATMQLVK 857 (867)
T ss_pred HHHHHHhhCcCCCCcCcch--HHHHHHHHHHHHH-HHHHHhchhhhhhhhccccCCccHHHHHHHHHHHH--HHHHHHHH
Confidence 9999999999874334444 4444444333332 22233322 23456665433 3433333333 36688988
Q ss_pred HHHHHhc
Q 002765 844 FGIRYIL 850 (883)
Q Consensus 844 ~~~~~~~ 850 (883)
++..+.+
T Consensus 858 ~~~~~~~ 864 (867)
T TIGR01524 858 TFYIRRF 864 (867)
T ss_pred HHHHHhc
Confidence 7766554
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-130 Score=1196.05 Aligned_cols=805 Identities=31% Similarity=0.484 Sum_probs=669.1
Q ss_pred ccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 002765 16 SVDLERIPIE--EVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG 91 (883)
Q Consensus 16 ~~~~~~~~~~--~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~ 91 (883)
+..||..+.+ ++...+.++ .+|||++|+.+|+++||.|+++..+ .+.|..|++||++|+.++|+++++++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-- 97 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG-- 97 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4567888888 999999887 7799999999999999999999654 788999999999999999999999999986
Q ss_pred CCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCee
Q 002765 92 GGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (883)
Q Consensus 92 ~~~~~~~----~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~v 167 (883)
.| .++..|+.++++|++++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.+++||+|
T Consensus 98 -----~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~v 172 (917)
T COG0474 98 -----DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVV 172 (917)
T ss_pred -----cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCcc
Confidence 66 566688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCeEEEeccccCCCcceecCC--------------CCCccccceeecceEEEEEEEecchhhhhhhhhhhh
Q 002765 168 PADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233 (883)
Q Consensus 168 PaD~~ll~g~~l~Vdes~LTGEs~pv~K~~--------------~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~ 233 (883)
|||++|++++.++||||+|||||.|+.|.+ .|++|+||.+.+|++.++|++||.+|++|+++.++.
T Consensus 173 PAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~ 252 (917)
T COG0474 173 PADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLP 252 (917)
T ss_pred ccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhc
Confidence 999999999888999999999999999963 478899999999999999999999999999999999
Q ss_pred cC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhcc
Q 002765 234 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 312 (883)
Q Consensus 234 ~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~ 312 (883)
.. +..+++++.++++++++..+.++..++.++..+...+.+|...+.++++++++++|++||+.++++++.|+.+|+++
T Consensus 253 ~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 253 TKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 88 68999999999999887655555344333333332234488999999999999999999999999999999999999
Q ss_pred CcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCC------h---HHHHHHHHHhcc--cc------C
Q 002765 313 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------K---EHVILLAARASR--TE------N 375 (883)
Q Consensus 313 ~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~---~~~l~~~~~~~~--~~------~ 375 (883)
++++|+++++|+||++|+||+|||||||+|+|+|.+++........+ . .+.+..++.|+. .. .
T Consensus 333 ~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~ 412 (917)
T COG0474 333 NAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQA 412 (917)
T ss_pred cchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceec
Confidence 99999999999999999999999999999999999998752011111 1 123444444442 22 4
Q ss_pred CChHHHHHHHhcC------ChhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC-------Ch
Q 002765 376 QDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-------RE 442 (883)
Q Consensus 376 ~~~~~~ai~~~~~------~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~~ 442 (883)
+||+|.|++.++. +.......+++++++||||.||||++++++.+|++++++|||||.|+++|+. .+
T Consensus 413 gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~ 492 (917)
T COG0474 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTE 492 (917)
T ss_pred CCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCH
Confidence 6999999999874 3344556667899999999999999999977777999999999999999973 45
Q ss_pred hHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC----CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCC
Q 002765 443 DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518 (883)
Q Consensus 443 ~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD 518 (883)
+.++.+++..++|+++|+|++++|||..+..+. +..|++|+|+|+++|+||||+|++++|+.|++|||++||+|||
T Consensus 493 ~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 493 EGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 667889999999999999999999997765443 5789999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCH
Q 002765 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598 (883)
Q Consensus 519 ~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~ 598 (883)
|+.||++||++||+..+......++|.+. +.++++++.+.+++..||||++|+||.++|+.+|+.|++|+|||||+||+
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~~~vi~G~el-~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 573 HVETAIAIAKECGIEAEAESALVIDGAEL-DALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCceeEeehHHh-hhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 99999999999998765322224445444 47788899999999999999999999999999999999999999999999
Q ss_pred HHHhhCCeeEEec-CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-cC
Q 002765 599 PALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL-IWK-FD 675 (883)
Q Consensus 599 ~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~-~~ 675 (883)
||||+|||||||+ +|+|+||++||+++.+++|..++.+++|||++|.|++|++.|.+++|+..++.++++.+ .++ .|
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p 731 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLP 731 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999998 79999999999999999999999999999999999999999999999987766665544 345 68
Q ss_pred ccHHHHHHHHHhhhhh-hhccccCCCC------CCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 002765 676 FSPFMVLIIAILNDGT-IMTISKDRVK------PSPQPDS--WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (883)
Q Consensus 676 l~~~~il~i~l~~~~~-~~~l~~~~~~------~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (883)
++|+|++|+|+++|.+ +++++.++++ |+++|++ |..+.++.+++..|...+++.++.|.+.+.... ....
T Consensus 732 ~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~-~~~~ 810 (917)
T COG0474 732 LTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI-ANTL 810 (917)
T ss_pred HHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccc
Confidence 9999999999999996 6888877522 2224444 556666666777788888777776666553211 0011
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCcccC---chHHHHHHHHHHHHHHHHHHHhhcc--ccccccccc
Q 002765 747 GVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFIAVYANW--SFARIEGCG 821 (883)
Q Consensus 747 g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 821 (883)
+... .....+|++|+.++++++++.+.+|+.+.+|++. .++.++.++++..++..+..+++.. ..+...++.
T Consensus 811 ~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~ 887 (917)
T COG0474 811 GLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLS 887 (917)
T ss_pred chhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCc
Confidence 1000 1456789999999999999999999987554443 5667777776665554444332221 234455555
Q ss_pred hhHHHHHHHHH
Q 002765 822 WGWAGVIWLYS 832 (883)
Q Consensus 822 ~~~~~~~~~~~ 832 (883)
+.-|+++..+.
T Consensus 888 ~~~~~~~~~~~ 898 (917)
T COG0474 888 LFEWLIAIAVA 898 (917)
T ss_pred HHHHHHHHHHH
Confidence 44344433333
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-126 Score=1178.69 Aligned_cols=831 Identities=23% Similarity=0.364 Sum_probs=676.6
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--
Q 002765 16 SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG-- 91 (883)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~-- 91 (883)
.++||..+.+++++.|+++ .+|||++||++|+++||+|++++++ .+.|+.|+++|++|++++|+++++++++....
T Consensus 14 ~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~ 93 (997)
T TIGR01106 14 EMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQA 93 (997)
T ss_pred cCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh
Confidence 6779999999999999998 6799999999999999999998765 66889999999999999999999998875321
Q ss_pred ----CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCee
Q 002765 92 ----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (883)
Q Consensus 92 ----~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~v 167 (883)
.+...+|.+++++++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|
T Consensus 94 ~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 94 STEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred ccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEE
Confidence 1123478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCeEEEeccccCCCcceecCCCC----------CccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-
Q 002765 168 PADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 236 (883)
Q Consensus 168 PaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~----------~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~- 236 (883)
||||++++|+.+.||||+|||||.|+.|.+++ ++|+||.+.+|++.++|++||.+|++|++.+++++.+
T Consensus 174 PaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 253 (997)
T TIGR01106 174 PADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLEN 253 (997)
T ss_pred eeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhccc
Confidence 99999999977999999999999999998864 6999999999999999999999999999999987764
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCccc
Q 002765 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (883)
Q Consensus 237 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilv 316 (883)
+++|+++.++++.+.+....++..++ +++.+...+.+|.+.+.+++++++++|||+||++++++++.++++|+++|+++
T Consensus 254 ~~~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilv 332 (997)
T TIGR01106 254 GKTPIAIEIEHFIHIITGVAVFLGVS-FFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLV 332 (997)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEe
Confidence 67999999999988755443332222 22222334567888899999999999999999999999999999999999999
Q ss_pred ccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc---cC--------CCh-----HHHHHHHHHhccc-------
Q 002765 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG--------VEK-----EHVILLAARASRT------- 373 (883)
Q Consensus 317 k~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~--------~~~-----~~~l~~~~~~~~~------- 373 (883)
|+++++|+||++|+||||||||||+|+|+|.+++.+... ++ .+. +.++..++.|+..
T Consensus 333 k~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~ 412 (997)
T TIGR01106 333 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQE 412 (997)
T ss_pred cCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccC
Confidence 999999999999999999999999999999987642110 00 111 1345555554321
Q ss_pred --------cCCChHHHHHHHhcC----ChhhhhcCceEEEeecCCCcCccEEEEEEcC--C-CcEEEEEcCChHHHHHhc
Q 002765 374 --------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS--D-GNWHRASKGAPEQILALC 438 (883)
Q Consensus 374 --------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~--~-g~~~~~~KGa~e~il~~~ 438 (883)
..+||+|.|+++++. +..+.+..++.++.+||+|+||||++++... + +++++++|||||.|+++|
T Consensus 413 ~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c 492 (997)
T TIGR01106 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492 (997)
T ss_pred CCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHh
Confidence 125899999998753 3344567788999999999999999887632 2 467899999999999999
Q ss_pred cC----------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC--------C---CCCCCceEEEeeccCCCCCCC
Q 002765 439 NC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------E---SPGAPWQLVGLLPLFDPPRHD 497 (883)
Q Consensus 439 ~~----------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~--------~---~~e~~l~~lG~i~~~D~lr~~ 497 (883)
+. +++.++.+.+.+++++++|+||+++||+++++.+. + ..|++|+|+|+++++||||+|
T Consensus 493 ~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~ 572 (997)
T TIGR01106 493 SSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAA 572 (997)
T ss_pred hHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHH
Confidence 63 23456778888999999999999999998764321 1 237899999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCC----------------------CCcccCcccccccCcch
Q 002765 498 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQDKDASIAALP 555 (883)
Q Consensus 498 ~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~----------------------~~~~~~~~~~~~~~~~~ 555 (883)
++++|++|+++||+++|+|||++.+|.++|+++|+..+... ...++|.+ .+.+++++
T Consensus 573 v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~-l~~l~~~e 651 (997)
T TIGR01106 573 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSD-LKDMTSEQ 651 (997)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHH-hhhCCHHH
Confidence 99999999999999999999999999999999999643211 01333333 34667778
Q ss_pred HHHHhhhcC--eEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchH
Q 002765 556 VDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 632 (883)
Q Consensus 556 ~~~~~~~~~--v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~ 632 (883)
+++.+++.. ||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|+||+|++
T Consensus 652 l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 652 LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 888888765 99999999999999999999999999999999999999999999999 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccCccHHHHHHHHHhhhhh-hhccccCCCCCC---CCCC
Q 002765 633 IISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPD 707 (883)
Q Consensus 633 i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~-~~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~~~~ 707 (883)
|++++++||++|+|++|++.|.++.|+..++..+++.++ .+.|++|+|++|+|+++|.+ ++++++|++++. ++|+
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCc
Confidence 999999999999999999999999999887776665544 56799999999999999985 799999887654 1232
Q ss_pred ch-----hHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc-ccccc-cccc---------cccCCC-------------hhh
Q 002765 708 SW-----KLKEIF-ATGVVLGSYLAIMTVVFFWLMRKT-DFFSD-AFGV---------RSLRTR-------------PDE 757 (883)
Q Consensus 708 ~~-----~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~g~---------~~~~~~-------------~~~ 757 (883)
++ ..+..+ .+++..|+++++..++.|++.++. ++... .++. .+..+. ..+
T Consensus 812 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (997)
T TIGR01106 812 NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFT 891 (997)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhh
Confidence 22 112223 344566888888887766554321 21110 0110 000000 014
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCC-c-ccCchHHHHHHHHHHHHHHHHHHHhhc--cccccccccchhHHHHHHHHHH
Q 002765 758 MMAALYLQVSIISQALIFVTRSRSWS-F-IERPGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLYSL 833 (883)
Q Consensus 758 ~~t~~f~~~~~~~~~~~~~~r~~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 833 (883)
.+|++|.+++++|.++.+++|+++.+ | ...+|++++.++++.+++.+++ .|.+ ..++.+.+++|.+|++++++++
T Consensus 892 ~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 970 (997)
T TIGR01106 892 CHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYSL 970 (997)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence 68999999999999999999997643 2 2345667777777665554444 4443 2456678888888888888898
Q ss_pred HHHHHHHHHHHHHHHh
Q 002765 834 VTYFPLDILKFGIRYI 849 (883)
Q Consensus 834 ~~~~~~~~~K~~~~~~ 849 (883)
+.+++.++.|++.|++
T Consensus 971 ~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 971 LIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 8888999999888764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-125 Score=1160.96 Aligned_cols=801 Identities=27% Similarity=0.396 Sum_probs=674.0
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-ccHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 002765 17 VDLERIPIEEVFEQLKCS-REGLT-SDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEAAAIMAIALANGG 92 (883)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~GLs-~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~l~~~~il~~~~~~~~ 92 (883)
.+||.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ +++|+.|+++| ++|+.++|+++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 468999999999999998 66999 99999999999999999765 67889999999 9999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceE
Q 002765 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (883)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ 172 (883)
+|.+++.|+++++++..++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEeccccCCCcceecCCCC--------------CccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-C
Q 002765 173 LLEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-Q 237 (883)
Q Consensus 173 ll~g~~l~Vdes~LTGEs~pv~K~~~~--------------~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~ 237 (883)
|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|++|++.+++++++ +
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999977999999999999999998863 7999999999999999999999999999999998765 6
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccc
Q 002765 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (883)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (883)
++++|+.++++++++....++.+++.+++.| ..+.+|.+++..++++++++|||+||++++++++.+++||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 8999999999998765433222222222333 345678889999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCeeEEEeccCCCcccCceeEeeeeeecccc------CC-------------------ChHHHHHHHHHhcc
Q 002765 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK------GV-------------------EKEHVILLAARASR 372 (883)
Q Consensus 318 ~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~------~~-------------------~~~~~l~~~~~~~~ 372 (883)
+++++|+||++|+||||||||||+|+|+|.+++...... ++ ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 999999999999999999999999999999876421000 00 01234545544432
Q ss_pred c--------cCCChHHHHHHHhcCC--hhhhhcCceEEEeecCCCcCccEEEEEEcC-CCcEEEEEcCChHHHHHhccC-
Q 002765 373 T--------ENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNC- 440 (883)
Q Consensus 373 ~--------~~~~~~~~ai~~~~~~--~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~~~~- 440 (883)
. ..+||+|.|+++++.. .+..+..++.++++||+|.+|||+++++.. +++++.++|||||.++.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 2 1257999999988642 222345678899999999999999988753 567889999999999999963
Q ss_pred ----------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCC
Q 002765 441 ----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV 510 (883)
Q Consensus 441 ----------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi 510 (883)
+++.++.+.+.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++||++|+
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 133456778888999999999999999974 45799999999999999999999999999999
Q ss_pred eEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEE
Q 002765 511 NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590 (883)
Q Consensus 511 ~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~ 590 (883)
+++|+|||++.||.++|+++||.... ...+.|.+ .+.++++++++.+++..+|||++|+||.++|+.+|+.|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~-l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEK-LDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHH-hHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999997532 22344443 3467888999999999999999999999999999999999999
Q ss_pred EcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 002765 591 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI- 668 (883)
Q Consensus 591 iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~- 668 (883)
+|||+||+|||++|||||||| +|+|+++++||+++++|+|++++.++++||++|+|++|++.|.++.|+..++.++++
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999 799999999999999999999999999999999999999999999999876665443
Q ss_pred HHhhccCccHHHHHHHHHhhhhh-hhccccCCCCCC---CCCCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002765 669 ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDS----WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTD 740 (883)
Q Consensus 669 ~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 740 (883)
.+..+.|++|+|++|+|+++|.+ ++++++|++++. ++|++ ...+.++..++..|+++++++++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 44467899999999999999987 599999887654 12322 2234566667788888887777666543310
Q ss_pred cccccccccccCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCccc---CchHHHHHHHHHHHHHHHHHHHhhc--cccc
Q 002765 741 FFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN--WSFA 815 (883)
Q Consensus 741 ~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ 815 (883)
+ ....+.+|++|.+++++|.++.+++|+++.+++. ..|+++++++++.+++. ++.+|.+ ..++
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~p~~~~~f 849 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQ-LLVIYFPPLQSVF 849 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 1 1224567999999999999999999997644332 24567777777666554 3334533 2345
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002765 816 RIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 849 (883)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~ 849 (883)
.+.+++|..|+++++++++.+++.|+.|++.|++
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6788899888888999999999999999987654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-127 Score=1073.66 Aligned_cols=813 Identities=23% Similarity=0.339 Sum_probs=651.6
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-CCCCc
Q 002765 23 PIEEVFEQLKCS-REGLTS--DEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGG-GRDPD 97 (883)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs~--~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~-~~~~~ 97 (883)
..+.+++.|+++ ..||+. +|..+|++.||.|.+|++++ ++|+..++.+.+.-.++|.++|++|+.++... +....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 378999999999 679987 88999999999999999875 56667789999999999999999999988643 33569
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEec
Q 002765 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (883)
Q Consensus 98 ~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~-~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g 176 (883)
|++++.|++.+++..++....+|+.++....|++ ....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998877666656666666666666555553 234578999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCC--CCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHH
Q 002765 177 DPLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCI 253 (883)
Q Consensus 177 ~~l~Vdes~LTGEs~pv~K~~--~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~ 253 (883)
+++.+|||++||||.++.|.+ ..++++||++.+|.++++|+++|.+|+.|++..++.+.. +++|+|-.+++++..+.
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 458999999999999999999999999999999998776 89999998888765421
Q ss_pred ---HHHHHHHHHHHHhhhhcc-----cc---c--------hHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCc
Q 002765 254 ---CSIAVGIVAEIIIMYPVQ-----HR---K--------YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (883)
Q Consensus 254 ---~~i~~~~~~~~~~~~~~~-----~~---~--------~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (883)
+..+...++..+..|+.. +. . +.+.+..++.++++++|+|||+++++++++++++|.+++.
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 111221222222233321 11 1 1223445566788999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccC--------CChH--HHHHHH-HHhcc-----------
Q 002765 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG--------VEKE--HVILLA-ARASR----------- 372 (883)
Q Consensus 315 lvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~--------~~~~--~~l~~~-~~~~~----------- 372 (883)
+||+++|+|+||+.++||+|||||||+|+|+|.+.++....+. .++. +++..+ +..+.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999776322111 1111 111111 11111
Q ss_pred --ccCCChHHHHHHHhc----CChhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC------
Q 002765 373 --TENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------ 440 (883)
Q Consensus 373 --~~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 440 (883)
...++|+|+|++++. .+.+..+...+..+.+||+|.+|+|+++++.++|..+.++|||+|.|+++|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 112589999999875 46667788888999999999999999999977776349999999999999974
Q ss_pred -----ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCC-------C-CCCCCCCceEEEeeccCCCCCCChHHHHHHHHh
Q 002765 441 -----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALN 507 (883)
Q Consensus 441 -----~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~-------~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ 507 (883)
+++.++.+++.++.|+++|+|++|+||++..+. + .+..+.+|+++|+++++||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566899999999999999999999984332 1 245688999999999999999999999999999
Q ss_pred CCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCE
Q 002765 508 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI 587 (883)
Q Consensus 508 aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~ 587 (883)
|||+|.|+||||..||++||.+|||.++..+...+.| .+..++++++.++++++.+|+||.+|.||.-+|+.++++|++
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG-~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEG-KEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecc-hhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 9999999999999999999999999876544344444 444588999999999999999999999999999999999999
Q ss_pred EEEEcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 002765 588 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR-IVLGF 665 (883)
Q Consensus 588 v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~-~~~~~ 665 (883)
||++|||+||+||||+||||.||| .|+|+|||+||+||+||||++|+++++|||.+|+||+||++|+++.|+. +++.+
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999995 44445
Q ss_pred HHHHHhhccCccHHHHHHHHHhhhhh-hhccccCCCCCC---C----CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 666 MLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---P----QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMR 737 (883)
Q Consensus 666 ~~~~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 737 (883)
..+......|++++|+||+|+++|.+ ++++++|++.+. + |......+.+|+..+.+++++.++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 55555567899999999999999988 799999998654 1 223445567888888889998887776554432
Q ss_pred hccccccccccc-ccCCChhhHHHHHHHHHHHHHHHHhhhhccCC--CC---cccCchHHHHHHHHHHHHHHHHHHHhhc
Q 002765 738 KTDFFSDAFGVR-SLRTRPDEMMAALYLQVSIISQALIFVTRSRS--WS---FIERPGLLLATAFVIAQLVATFIAVYAN 811 (883)
Q Consensus 738 ~~~~~~~~~g~~-~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~--~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 811 (883)
. . |+.. ..+....+..|+.|.+++++|.+|-++.|+-. -. .++|+ ++++++...++++.+.+...
T Consensus 901 ~--i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviIveF~ 971 (1034)
T KOG0204|consen 901 S--I----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVIIVEFG 971 (1034)
T ss_pred h--h----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhhhhhc
Confidence 1 1 2211 11112345569999999999999999999855 11 23333 23333333333344433322
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 002765 812 WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 845 (883)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (883)
..++.+.+++|.-|++++.+.+..+..-.+.|.+
T Consensus 972 g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 972 GAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred CcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 3456788999999988888887777777777755
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-124 Score=1153.55 Aligned_cols=817 Identities=22% Similarity=0.325 Sum_probs=664.5
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------C
Q 002765 23 PIEEVFEQLKCS-REGLT--SDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANG------G 92 (883)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~------~ 92 (883)
..+++++.|+++ ++||| ++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999999 67999 999999999999999998764 6788899999999999999999999997621 2
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccce
Q 002765 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (883)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~ 171 (883)
++..+|.++++|+++++++..+++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEEecCCeEEEeccccCCCcceecCCCCC--ccccceeecceEEEEEEEecchhhhhhhhhhhhcCCCCCcHHHHHHHHH
Q 002765 172 RLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249 (883)
Q Consensus 172 ~ll~g~~l~Vdes~LTGEs~pv~K~~~~~--v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~i~ 249 (883)
+|++|+.+.||||+|||||.|+.|++++. +|+||.|.+|++.++|++||.+|++||+.++++++++++++++.+++++
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998775 9999999999999999999999999999999988777789999999988
Q ss_pred HHHHHHHHHHHHHHHH---hhhhcc---c---------cchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCc
Q 002765 250 NFCICSIAVGIVAEII---IMYPVQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (883)
Q Consensus 250 ~~~~~~i~~~~~~~~~---~~~~~~---~---------~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (883)
+++....++..++.++ +.+... . .++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 7754332221111111 111111 1 246678889999999999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc---cC----CC--hHHHHHHHHHh-ccc-----------
Q 002765 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----VE--KEHVILLAARA-SRT----------- 373 (883)
Q Consensus 315 lvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~----~~--~~~~l~~~~~~-~~~----------- 373 (883)
++|+++++|+||++|+||||||||||+|+|+|.+++..... .+ .+ ..+++..++.+ +.+
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999987653210 00 00 12223322222 221
Q ss_pred cCCChHHHHHHHhcC----ChhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCC--------
Q 002765 374 ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-------- 441 (883)
Q Consensus 374 ~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 441 (883)
..+||+|.|+++++. +..+.+..++.++.+||+|.+|+|+++++..++++++++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125899999998864 23334456777889999999999999998766778999999999999999631
Q ss_pred --hhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC---CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEc
Q 002765 442 --EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516 (883)
Q Consensus 442 --~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlT 516 (883)
.+.++.+.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++||++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0135677888899999999999999998764332 33478999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCcc
Q 002765 517 GDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVN 596 (883)
Q Consensus 517 GD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~N 596 (883)
|||+.||.++|+++||.++. ...+.|.+. ..++++++++.+++..+|||++|+||.++|+.+|++|++|+|+|||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~-~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEF-RRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHh-hhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997531 234444443 467788999999999999999999999999999999999999999999
Q ss_pred CHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcc
Q 002765 597 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKF 674 (883)
Q Consensus 597 D~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~ 674 (883)
|+||||+|||||||| +|+|+|+++||++|+||+|++|+.++++||++|+|++|++.|.+++|+..++..+++ .++.+.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999776665554 444678
Q ss_pred CccHHHHHHHHHhhhhh-hhccccCCCCCC---CCCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 002765 675 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (883)
Q Consensus 675 ~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (883)
|++|+|++|+|+++|.+ ++++++|++++. ++|++| ..+.++..++..|++++++.++.+++... ++....
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~ 837 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVSG 837 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcccC
Confidence 99999999999999975 799999887654 223332 23456666778888888887766655432 111000
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHhhhhccCCC--Cccc-CchHHHHHHHHHHHHHHHHHHHhhccccccccccchh
Q 002765 747 GVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSW--SFIE-RPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWG 823 (883)
Q Consensus 747 g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~--~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (883)
+...........+|+.|.+++++++++.+++|+.+. +|.. ..|++++.++++.+++..++..+. ...+++.+++|.
T Consensus 838 ~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l~~~ 916 (941)
T TIGR01517 838 PDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFG-GSFFSTVSLSIE 916 (941)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHH-HHHhcccCCCHH
Confidence 000000123567899999999999999999998653 2321 124466666665555543433332 234567888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002765 824 WAGVIWLYSLVTYFPLDILKFG 845 (883)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~K~~ 845 (883)
.|+++++++++.+++.|+.|.+
T Consensus 917 ~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 917 QWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888998888889988876
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-121 Score=1022.37 Aligned_cols=849 Identities=24% Similarity=0.397 Sum_probs=703.1
Q ss_pred Cccccchhhhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHH
Q 002765 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVME 79 (883)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~ 79 (883)
.+|.++++++|+| +++.|+++.+|++++++++ .+|||.+++.+++++-|+|.+++++ .+.|.+|++|+++.+.+++|
T Consensus 22 ~~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~ 101 (1019)
T KOG0203|consen 22 KKKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLW 101 (1019)
T ss_pred cchhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHH
Confidence 4577889999999 8999999999999999999 8899999999999999999998776 56788999999999999999
Q ss_pred HHHHHHHHHhc------CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCC
Q 002765 80 AAAIMAIALAN------GGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASIL 153 (883)
Q Consensus 80 ~~~il~~~~~~------~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~L 153 (883)
++++++++.+. +..+..+.+-++++..++++..++.++|+.+..+.+++++++.|..++|+|||+...+..+||
T Consensus 102 ~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eel 181 (1019)
T KOG0203|consen 102 IGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEEL 181 (1019)
T ss_pred HHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhc
Confidence 99999998542 111223444556666777888899999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC----------CCccccceeecceEEEEEEEecchh
Q 002765 154 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHT 223 (883)
Q Consensus 154 v~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~----------~~v~aGt~v~~G~~~~~V~~tG~~T 223 (883)
||||+|.++-||+||||.|++++..++||+|+|||||+|..+++. |+.|.+|.+++|.+.++|++||.+|
T Consensus 182 VvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~T 261 (1019)
T KOG0203|consen 182 VVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRT 261 (1019)
T ss_pred ccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCce
Confidence 999999999999999999999999999999999999999999763 6789999999999999999999999
Q ss_pred hhhhhhhhhhc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHH
Q 002765 224 FFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (883)
Q Consensus 224 ~~g~i~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~ 302 (883)
.+|+|+.+... ...++|+++.++++..+......+ +.+.++......+..|.+++.+.+.++++.+|++|+..++..+
T Consensus 262 v~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~L 340 (1019)
T KOG0203|consen 262 VMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCL 340 (1019)
T ss_pred EEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhH
Confidence 99999998765 457889999988887664322221 2222222223347788899989999999999999999999999
Q ss_pred HHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeecccc----------------CCChHHHHHH
Q 002765 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK----------------GVEKEHVILL 366 (883)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~----------------~~~~~~~l~~ 366 (883)
+..++||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.+.+..-. +..-.++++.
T Consensus 341 tltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~ 420 (1019)
T KOG0203|consen 341 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRI 420 (1019)
T ss_pred HHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999977531100 0111244555
Q ss_pred HHHhccc---------------cCCChHHHHHHHhc----CChhhhhcCceEEEeecCCCcCccEEEEEEcCC---CcEE
Q 002765 367 AARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSD---GNWH 424 (883)
Q Consensus 367 ~~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~---g~~~ 424 (883)
+..|... ..+|+.+.|+++++ .+..+.++..+.+.++||+|.+|+.-.+....+ .++.
T Consensus 421 ~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~ 500 (1019)
T KOG0203|consen 421 ATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFL 500 (1019)
T ss_pred HHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccce
Confidence 5555432 24689999999875 455677888999999999999999988887544 5778
Q ss_pred EEEcCChHHHHHhccC----------ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC-----------CCCCCCce
Q 002765 425 RASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQ 483 (883)
Q Consensus 425 ~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~-----------~~~e~~l~ 483 (883)
+..|||||.++++|+. ++..++.+++...++...|-||++++++.+++.+. .....+|.
T Consensus 501 l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~ 580 (1019)
T KOG0203|consen 501 LVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLR 580 (1019)
T ss_pred eeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhcc
Confidence 8999999999999973 45567888999999999999999999999886431 23457899
Q ss_pred EEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCC----------------------Cc
Q 002765 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS----------------------SS 541 (883)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~----------------------~~ 541 (883)
|+|++++.||||..+|+++..||.|||+|+|+||||+.||+++|++.||..+..+. .+
T Consensus 581 FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~V 660 (1019)
T KOG0203|consen 581 FLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAV 660 (1019)
T ss_pred ccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEE
Confidence 99999999999999999999999999999999999999999999999975421100 01
Q ss_pred ccCcccccccCcchHHHHhhhcC--eEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHH
Q 002765 542 LLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAAR 618 (883)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~--v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~ 618 (883)
+.| .+...++.+++++++.+.. ||||.||+||+.||+.+|++|.+|+++|||+||+||||+|||||||| .|+|++|
T Consensus 661 ihG-~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsK 739 (1019)
T KOG0203|consen 661 IHG-SELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 739 (1019)
T ss_pred Eec-ccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHH
Confidence 223 3334778889999998765 99999999999999999999999999999999999999999999999 9999999
Q ss_pred hccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccCccHHHHHHHHHhhhhh-hhccc
Q 002765 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTIS 696 (883)
Q Consensus 619 ~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~~l~~~~il~i~l~~~~~-~~~l~ 696 (883)
+|||+||+||||++|+..+++||-+|+|+||.|.|.+++|+..+..++.+ .++.|+|+.++++|.|.+.+|+. +++++
T Consensus 740 qAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLA 819 (1019)
T KOG0203|consen 740 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLA 819 (1019)
T ss_pred hhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHh
Confidence 99999999999999999999999999999999999999999887776554 45689999999999999999987 79999
Q ss_pred cCCCCCC-----C-CC--CchhHHHHHHH-HHHHHHHHHHHHHHHHHHH-Hhccccccc----------ccccccCCCh-
Q 002765 697 KDRVKPS-----P-QP--DSWKLKEIFAT-GVVLGSYLAIMTVVFFWLM-RKTDFFSDA----------FGVRSLRTRP- 755 (883)
Q Consensus 697 ~~~~~~~-----~-~~--~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~-~~~~~~~~~----------~g~~~~~~~~- 755 (883)
||.++.. | .| ++...++++.+ ++.+|+++++.+|+.|+.. ...+|+|.. .+++++.+++
T Consensus 820 YE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyG 899 (1019)
T KOG0203|consen 820 YEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYG 899 (1019)
T ss_pred ccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhcc
Confidence 9987532 1 12 23333455444 5678999999999765544 445665532 1122222222
Q ss_pred ------------hhHHHHHHHHHHHHHHHHhhhhccCCCC--cccCchHHHHHHHHHHHHHHHHHHHhhc-ccccccccc
Q 002765 756 ------------DEMMAALYLQVSIISQALIFVTRSRSWS--FIERPGLLLATAFVIAQLVATFIAVYAN-WSFARIEGC 820 (883)
Q Consensus 756 ------------~~~~t~~f~~~~~~~~~~~~~~r~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 820 (883)
.+++|.+|++++++|++.++.+.+++-+ -+...||.+++++++-.+++.++.+-+. ...+++.|+
T Consensus 900 QeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl 979 (1019)
T KOG0203|consen 900 QEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPL 979 (1019)
T ss_pred ccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCC
Confidence 2256889999999999998888877743 4556788999999888777766644322 234568889
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 002765 821 GWGWAGVIWLYSLVTYFPLDILKFGIRYILSGK 853 (883)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~ 853 (883)
.|.||+..+.++++.++.+|+.|++.|++..++
T Consensus 980 ~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~gw 1012 (1019)
T KOG0203|consen 980 KFQWWLVAFPFGILIFVYDEVRKLFIRRYPGGW 1012 (1019)
T ss_pred CcEEEEecccceeeeeeHHHHHhHhhhhCCCch
Confidence 999999989999999999999999999875543
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-116 Score=1078.71 Aligned_cols=778 Identities=27% Similarity=0.374 Sum_probs=625.4
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcC---CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC
Q 002765 66 FLGFMWNPLSWVMEAAAIMAIALANG---GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (883)
Q Consensus 66 ~~~~~~~~~~~~l~~~~il~~~~~~~---~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd 142 (883)
+++||++|++++|+++++++++++.. .....+|.++++|++++++++.++++||+|+++++++|+++.+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 46899999999999999999998632 122358999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC-------------CCccccceeec
Q 002765 143 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 209 (883)
Q Consensus 143 g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~-------------~~v~aGt~v~~ 209 (883)
|++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ +++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997799999999999999999875 78999999999
Q ss_pred ceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----cccch----HhHH
Q 002765 210 GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-----QHRKY----RDGI 279 (883)
Q Consensus 210 G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-----~~~~~----~~~~ 279 (883)
|++.++|++||.+|++||+.++++.++ +++++|+.+++++.++...+++.+++.+++.... ...+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 999999999999999999999887764 7899999999998775443332222222211110 11123 2344
Q ss_pred HHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeecc-----
Q 002765 280 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF----- 354 (883)
Q Consensus 280 ~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~----- 354 (883)
..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 567789999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHhccc------------cCCChHHHHHHHhcCCh----h--
Q 002765 355 ------AKGVE-------------------KEHVILLAARASRT------------ENQDAIDAAIVGMLADP----K-- 391 (883)
Q Consensus 355 ------~~~~~-------------------~~~~l~~~~~~~~~------------~~~~~~~~ai~~~~~~~----~-- 391 (883)
+.+++ .+.++..++.|+.. ..+||.|.|++.++.+. .
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 12234444444321 12599999998875321 0
Q ss_pred --------------hhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC-----------ChhHHH
Q 002765 392 --------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRK 446 (883)
Q Consensus 392 --------------~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 446 (883)
..+..++.++++||+|.+|||++++++ ++++.+++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123457789999999999999999875 467889999999999999963 134567
Q ss_pred HHHHHHHHHHH-ccCeEEEEEeeccCCCC----------CCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEE
Q 002765 447 KVHAVIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (883)
Q Consensus 447 ~~~~~~~~~~~-~G~r~l~~A~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~ml 515 (883)
++.+.+++|++ +|+||+++||++++++. .+..|++|+|+|+++++||||++++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHHhCCCCCCCC--CCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcC
Q 002765 516 TGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593 (883)
Q Consensus 516 TGD~~~ta~~ia~~~Gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGD 593 (883)
|||+..||.++|+++|+..+..+ ...+.|.+ ...++++++.+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~-l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGRE-FDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHH-HhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 12234433 3456677788888888999999999999999999999999999999
Q ss_pred CccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Q 002765 594 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIW 672 (883)
Q Consensus 594 G~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~ 672 (883)
|+||+||||+|||||||++|++++|++||+++.||+|+++++++++||++|+|++|++.|.+++|+..++..+++. +.+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998777766554 346
Q ss_pred ccCccHHHHHHHHHhhhhh-hhccccCCCCCC-----CCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Q 002765 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT-DFFS 743 (883)
Q Consensus 673 ~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~-----~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 743 (883)
+.|++|+|++|+|+++|.+ +++++++++++. |++ ++...++.+..++..|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6899999999999999965 688998887654 111 122234556667778999988877665544321 1110
Q ss_pred c--cc--cccccC-------CChhhHHHHHHHHHHHHHHHHhhhhccCCCCccc---CchHHHHHHHHHHHHHHHHHHHh
Q 002765 744 D--AF--GVRSLR-------TRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVY 809 (883)
Q Consensus 744 ~--~~--g~~~~~-------~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 809 (883)
. .. +..+.. ....+.+|++|.+++++|+++.+++|+++.+++. ..|++++.++++.+++. ++..|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALH-FLILY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHH-HHHHH
Confidence 0 00 000000 0134578999999999999999999997644322 23557777776665554 34345
Q ss_pred hc--cccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 810 AN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGI 846 (883)
Q Consensus 810 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 846 (883)
.+ ..++++.|++|..|+++++++++.+++.|+.|++.
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 23456788999999988999999999999999875
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-112 Score=1060.37 Aligned_cols=754 Identities=21% Similarity=0.261 Sum_probs=592.7
Q ss_pred CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 002765 35 REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (883)
Q Consensus 35 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ 114 (883)
.+|||++|+++|+++||+|+++.+++++|+.|++++++|++++++++++++++. .+|+++++++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999988888999999999999998888876665543 3789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEe--CCCeeccceEEEecCCeEEEeccccCCCcc
Q 002765 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLP 192 (883)
Q Consensus 115 ~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~--~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~p 192 (883)
++++++|+.++++++.. .++.++|+|||++++|+++||||||+|.|+ +||+|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998887654 567899999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------CCccccceeec-------ceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHH
Q 002765 193 VTKNPY------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLT 246 (883)
Q Consensus 193 v~K~~~------------------~~v~aGt~v~~-------G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~ 246 (883)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+.+...+ ..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 24999999985 789999999999999999999886654 5678888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcC
Q 002765 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326 (883)
Q Consensus 247 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg 326 (883)
++..++....+++.+.. ++.....+.++...+..++.++++++|++||++++++++.|+.||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~~-~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYT-IIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 76655433222222211 11122235678889999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEeccCCCcccCceeEeeeeeeccccC----------CChHHHHHHHHHhcc------ccCCChHHHHHHHhcCCh
Q 002765 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------VEKEHVILLAARASR------TENQDAIDAAIVGMLADP 390 (883)
Q Consensus 327 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----------~~~~~~l~~~~~~~~------~~~~~~~~~ai~~~~~~~ 390 (883)
++|++|||||||||+|+|+|.++........ ..........+.|.. ...+||+|.|++++.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998764211100 011222222332221 123699999999976311
Q ss_pred ----hh--h-------------hcCceEEEeecCCCcCccEEEEEEcCC-CcEEEEEcCChHHHHHhccCChhHHHHHHH
Q 002765 391 ----KE--A-------------RAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHA 450 (883)
Q Consensus 391 ----~~--~-------------~~~~~~~~~~~f~s~~k~~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 450 (883)
.+ . ...+++++.+||+|.+|||+++++..+ +++++++|||||.|+++|+. +..++.+++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 00 0 145788899999999999999998644 56789999999999999984 345677888
Q ss_pred HHHHHHHccCeEEEEEeeccCCC--------CCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHH
Q 002765 451 VIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (883)
Q Consensus 451 ~~~~~~~~G~r~l~~A~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 522 (883)
.+++++++|+||+++|||++++. ++++.|++|+|+|+++|+||+||+++++|++||++||+++|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC-------------CC--------------------------------------cccCcccc--c
Q 002765 523 GKETGRRLGMGTNMYP-------------SS--------------------------------------SLLGQDKD--A 549 (883)
Q Consensus 523 a~~ia~~~Gi~~~~~~-------------~~--------------------------------------~~~~~~~~--~ 549 (883)
|.++|+++||.++... .. .++|.+.. .
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 00 00111100 0
Q ss_pred ccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCC
Q 002765 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (883)
Q Consensus 550 ~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~ 629 (883)
.++++++.+++.+..||||++|+||.++|+.+|+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1234567778888999999999999999999999999999999999999999999999999965 444 79999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccHHHHHHHHHhhhhh-hhccccCCCCCC---CC
Q 002765 630 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQ 705 (883)
Q Consensus 630 ~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~---~~ 705 (883)
|++++.+|++||+++.|+++.+.|.+.+++...+.++. ....+.+++++|++|+|++++.+ +++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999999876554433 33456899999999999999987 688888887654 23
Q ss_pred CC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc-cCCChhhHHHHHHHHHHHHHHHHhhhhccCCCC
Q 002765 706 PD-SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSWS 783 (883)
Q Consensus 706 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~ 783 (883)
|. +...+..+...+..++++.++.+..|++....+|+........ ........+|++| .++.++++..+..++.+.+
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 33 2333445555666677777777776666655555421111100 0011233467777 5566677766777776533
Q ss_pred ccc--CchHHHHHHHHHHHHHH
Q 002765 784 FIE--RPGLLLATAFVIAQLVA 803 (883)
Q Consensus 784 ~~~--~~~~~l~~~~~~~~~~~ 803 (883)
+.. ..|.+++.++++..++.
T Consensus 1002 f~~~~~~N~~~~~~~~~~~~~~ 1023 (1054)
T TIGR01657 1002 FREPIYKNKPFVYLLITGLGLL 1023 (1054)
T ss_pred hhhhHHHhHHHHHHHHHHHHHH
Confidence 321 12445665655544443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-97 Score=929.31 Aligned_cols=784 Identities=18% Similarity=0.226 Sum_probs=568.2
Q ss_pred cCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 50 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125 (883)
Q Consensus 50 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~ 125 (883)
|..|.+...|++.| +.+++||.++++++++++++++++.... +...+...+.++++++++.+.++++++++.++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s--~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS--PTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC--CCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998875 7889999999999999999999985321 11233344556666678888999999999888
Q ss_pred HHHHhhcCCCeEEEEEC-CeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCC----eEEEeccccCCCcceecCCC--
Q 002765 126 AAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP----LKIDQSALTGESLPVTKNPY-- 198 (883)
Q Consensus 126 ~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~----l~Vdes~LTGEs~pv~K~~~-- 198 (883)
.++ .+++.++|+|| |++++++++||+|||+|.|++||+||||++|+++++ ++||||+|||||.|+.|++.
T Consensus 79 d~~---~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKE---VNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHH---HhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 764 45689999997 899999999999999999999999999999998544 99999999999999998641
Q ss_pred ----------------------------------------------CCccccceeec-ceEEEEEEEecchhhhhhhhhh
Q 002765 199 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 231 (883)
Q Consensus 199 ----------------------------------------------~~v~aGt~v~~-G~~~~~V~~tG~~T~~g~i~~l 231 (883)
|++++||.+.+ |.+.|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46789999999 999999999999998876321
Q ss_pred hhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc----cch---------------HhHHHHHHHHHHhhcCC
Q 002765 232 VDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPI 292 (883)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~llv~~iP~ 292 (883)
....+.+++++.++++..+++.+.++.+++..++...... ..| ...+..++.++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2234779999999999877544333322222222111111 012 12566788999999999
Q ss_pred cchHHHHHHHHHHH------HHhhcc----CcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccC-----
Q 002765 293 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----- 357 (883)
Q Consensus 293 ~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----- 357 (883)
+||+++++++..++ .+|.++ ++++|+.+++|+||++++||+|||||||+|+|+++++.++...++
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788864 599999999999999999999999999999999999875321000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHhccc-------c-------CCChH
Q 002765 358 --------V--------------------E----------------KEHVILLAARASRT-------E-------NQDAI 379 (883)
Q Consensus 358 --------~--------------------~----------------~~~~l~~~~~~~~~-------~-------~~~~~ 379 (883)
. + ..+.+..++.|+.. . .++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 01223333333211 1 25899
Q ss_pred HHHHHHhcCCh---------h---------hhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC-
Q 002765 380 DAAIVGMLADP---------K---------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC- 440 (883)
Q Consensus 380 ~~ai~~~~~~~---------~---------~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 440 (883)
|.|+++++... . .....|+.++.+||+|.||||++++++++|++++++|||||.|+++|+.
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99999875321 0 0124578899999999999999999988888899999999999999974
Q ss_pred ChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCC-------------------------CCCCCCCceEEEeeccCCCCC
Q 002765 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-------------------------KESPGAPWQLVGLLPLFDPPR 495 (883)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr 495 (883)
+++.++.+.+.+++++++|+||+++|+|.+++++ .+..|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 3456778889999999999999999999987542 134689999999999999999
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCC-----------------------------------
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 540 (883)
Q Consensus 496 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~----------------------------------- 540 (883)
+|++++|+.||+|||++||+|||+++||.++|+++|+..+.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975421100
Q ss_pred ----cccCcccccccCc---chHHHHhhhcC--eEEEeCcccHHHHHHHHHHc-CCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 541 ----SLLGQDKDASIAA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 541 ----~~~~~~~~~~~~~---~~~~~~~~~~~--v~ar~~P~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
.+.|...+..+++ +++.+++..++ ||||++|+||.++|+.+|+. |++|+|+|||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 1111111111111 12333444454 99999999999999999998 99999999999999999999999988
Q ss_pred c-CccHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----cCccHHHHHHH
Q 002765 611 A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK----FDFSPFMVLII 684 (883)
Q Consensus 611 ~-~~~~~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~----~~l~~~~il~i 684 (883)
. .....|+.+||+++.+ |..+.+++ .|||++|+|+++++.|.+++|+..++..+++.++.+ .++.+++++|+
T Consensus 794 ~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 871 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLY 871 (1057)
T ss_pred cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 4 2222577899999964 99999988 899999999999999999999988877777655432 25788999999
Q ss_pred HHhhhhh-hhcccc-CCCCCC----CCCC--------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Q 002765 685 AILNDGT-IMTISK-DRVKPS----PQPD--------SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS 750 (883)
Q Consensus 685 ~l~~~~~-~~~l~~-~~~~~~----~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 750 (883)
|++++.+ +++++. |...++ ..|+ +....+.+..+++.|++++++++++.++.+...... ..|.
T Consensus 872 n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g~-- 948 (1057)
T TIGR01652 872 NVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSGS-- 948 (1057)
T ss_pred HHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCc--
Confidence 9999986 577764 322111 1121 111223344556779999988776544443221110 1121
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHH-HHhhc-c------ccccccccch
Q 002765 751 LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFI-AVYAN-W------SFARIEGCGW 822 (883)
Q Consensus 751 ~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~-~------~~~~~~~~~~ 822 (883)
..+.....+..|+.+++...+.++ ..++.|.|. .++++.+++++..++ .+|.. + +........+
T Consensus 949 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~wt~~------~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 1020 (1057)
T TIGR01652 949 -LDDFSSVGVIVFTALVVIVNLKIA-LEINRWNWI------SLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTF 1020 (1057)
T ss_pred -ccchhhHHHHHHHHHHHHHHHHHH-HHHhHhHHH------HHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccH
Confidence 113344556677766666555432 223333322 222222222221111 11211 0 0011111234
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 002765 823 GWAGVIWLYSLVTYFPLDILKFGIRYILSGK 853 (883)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~ 853 (883)
.+|+.+++..++.++++.++|.+++.++|..
T Consensus 1021 ~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~ 1051 (1057)
T TIGR01652 1021 GFWLVLLVIVLISLLPRFTYKAIQRLFRPPD 1051 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 4666667777778888889999888887744
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-96 Score=857.25 Aligned_cols=545 Identities=23% Similarity=0.363 Sum_probs=453.7
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC-C-CCCCc--hhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCC-eEE
Q 002765 68 GFMWNPLSWVMEAAAIMAIALANG-G-GRDPD--WQDFVGIIVLLVINSTISFIE----ENNAGNAAAALMANLAP-KTK 138 (883)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~-~-~~~~~--~~~~~~i~~~i~~~~~~~~~~----e~~~~~~~~~l~~~~~~-~~~ 138 (883)
.+++||+.|+++++++++++++.. . ..... +++++.|.++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 468999999999999999987631 0 01112 245677778888888887777 78999999999999886 776
Q ss_pred -EEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC---CCccccceeecceEEE
Q 002765 139 -VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEA 214 (883)
Q Consensus 139 -V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~---~~v~aGt~v~~G~~~~ 214 (883)
|.|||++++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.||.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 579999999999999999999 8899999999999999
Q ss_pred EEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cccchHhHHHHHHHHHHhhcCC
Q 002765 215 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPI 292 (883)
Q Consensus 215 ~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~llv~~iP~ 292 (883)
+|+++|.+|++||+.+++++++ +++|+|.....+...+.+.. + ++ ++..+.+ ...++...+...+++++++|||
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~-l-~~--~~~~~~~~~~~~~~~~~~~~val~V~~IP~ 262 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIF-L-VV--ILTMYPLAKFLNFNLSIAMLIALAVCLIPT 262 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHH-H-HH--HHHHHHHHhhccHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998875 78898876655433222111 1 11 1111111 1123445677788888999999
Q ss_pred cchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhcc
Q 002765 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (883)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (883)
+||..++++.+.|+.||+|+|+++|+++++|++|++|++|||||||||+|++.+.+... ..+.+.++++..++.++.
T Consensus 263 aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSI 339 (673)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999998877766431 123455667777666665
Q ss_pred ccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCCh-hHHHHHHHH
Q 002765 373 TENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHAV 451 (883)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~ 451 (883)
.+ .||++.|++.++..... .......+++||++.+|+|++.+ +|+ .+.||+++.++++|+... ..+..+++.
T Consensus 340 ~s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 AD-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred CC-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 44 49999999987642210 00111235689999999999864 243 456999999999997421 223346667
Q ss_pred HHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhC
Q 002765 452 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (883)
Q Consensus 452 ~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~G 531 (883)
.++++++|+|+++++.+ ++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++|
T Consensus 413 ~~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 78899999999998742 48999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec
Q 002765 532 MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (883)
Q Consensus 532 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~ 611 (883)
|+. +|||++||||.++|+.+|++|++|+|+|||+||+|||++||||||||
T Consensus 480 I~~------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 480 VDR------------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred Cce------------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 952 79999999999999999999999999999999999999999999999
Q ss_pred CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL 670 (883)
Q Consensus 612 ~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 670 (883)
+|+|+||++||+|++||||++|++++++||++|.|+++++.|.++.|++..+..+.+.+
T Consensus 530 sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987776655444
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-93 Score=831.04 Aligned_cols=536 Identities=24% Similarity=0.323 Sum_probs=452.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----C---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eEEE
Q 002765 68 GFMWNPLSWVMEAAAIMAIALANGG----G---RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTKV 139 (883)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~~----~---~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 139 (883)
.||+||+.++++++++++++++... + ....|...+.+++.+++...++.++|+|+++++++|+++.+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5899999999999999999876311 1 112344455556666777778889999999999999998885 7999
Q ss_pred EECCe-EEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCC---ccccceeecceEEEE
Q 002765 140 LRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAV 215 (883)
Q Consensus 140 ~rdg~-~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~---v~aGt~v~~G~~~~~ 215 (883)
+|||+ +++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.||.|++|+. +|+||.|.+|++.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 89999999999999999999999999999999 58999999999999999999988 999999999999999
Q ss_pred EEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcc
Q 002765 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 294 (883)
Q Consensus 216 V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L 294 (883)
|+++|.+|.+||+.+++++++ +++|+|...+.+...+...+++.++..+.+.++ .+.. .++..++++++++|||+|
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 999999999999999998875 789999877776555433222212211112121 2222 368888999999999999
Q ss_pred hHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhcccc
Q 002765 295 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 374 (883)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 374 (883)
+...+.+...|+.||+|+|+++|+++++|+||++|++|||||||||+|+|++.+... ..+.+.++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999988753 23456677787777776655
Q ss_pred CCChHHHHHHHhcCCh---hhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCC-hhHHHHHHH
Q 002765 375 NQDAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHA 450 (883)
Q Consensus 375 ~~~~~~~ai~~~~~~~---~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~ 450 (883)
. ||.+.|+++++... ......++..++.||++.++++++.+ +| ..+.||++|.+++.|+.. .+.++++++
T Consensus 342 ~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 E-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred C-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 4 89999999876431 11111245667899999988887643 34 578999999999999642 233566778
Q ss_pred HHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHh
Q 002765 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (883)
Q Consensus 451 ~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 530 (883)
..++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 8899999999999999743 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 531 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
|+++ ++||++||||.++|+.+|++|++|+|+|||+||+|||++|||||||
T Consensus 483 GId~------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVDD------------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCcE------------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 9942 7999999999999999999999999999999999999999999999
Q ss_pred cCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659 (883)
Q Consensus 611 ~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 659 (883)
++|+|+||++||+|++||||+++++++++||++.-.--....|++..-+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999998444455666665444
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-91 Score=861.52 Aligned_cols=782 Identities=16% Similarity=0.163 Sum_probs=549.4
Q ss_pred hhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 48 HVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123 (883)
Q Consensus 48 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~ 123 (883)
.+|..|.+.+.|++.| +.+++||..+.+++++++++++++..... ...+...+.+++++++.++.+.++++++.
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688999999998865 67889999999999999999998753211 22445566677777888888888888888
Q ss_pred HHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCcceecCCC-
Q 002765 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY- 198 (883)
Q Consensus 124 ~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~----~l~Vdes~LTGEs~pv~K~~~- 198 (883)
++..+. ++..++|+|+|+++++++++|+|||+|.|++||+||||+++++++ .++||||+|||||.|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 777643 467899999999999999999999999999999999999999843 489999999999999999753
Q ss_pred --------------------------------------------CCccccceeecc-eEEEEEEEecchhhhhhhhhhhh
Q 002765 199 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 233 (883)
Q Consensus 199 --------------------------------------------~~v~aGt~v~~G-~~~~~V~~tG~~T~~g~i~~l~~ 233 (883)
+.+++||.+.+. .+.|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 234555655554 59999999999997432 1112
Q ss_pred cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhccc-c-----ch-----------------------HhHHHHH
Q 002765 234 STNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQH-R-----KY-----------------------RDGIDNL 282 (883)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~~~-~-----~~-----------------------~~~~~~~ 282 (883)
...+.+++++.+|++..+++++.++.+++..++ .|.... . .| ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 224779999999998876544333322222222 121100 0 00 1112234
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHhhccC----------cccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeee
Q 002765 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352 (883)
Q Consensus 283 ~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 352 (883)
+.++...||++|++.+++++..++..+.++. +.+|+.+..|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5666789999999999999988788887655 789999999999999999999999999999999998763
Q ss_pred ccccC-----------------------------------------CC-h-----HHHHHHHHHhccc------------
Q 002765 353 VFAKG-----------------------------------------VE-K-----EHVILLAARASRT------------ 373 (883)
Q Consensus 353 ~~~~~-----------------------------------------~~-~-----~~~l~~~~~~~~~------------ 373 (883)
...++ .+ + .+.+...+.|...
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 21100 00 0 1123333333211
Q ss_pred ------cCCChHHHHHHHhcCC----------------hhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCCh
Q 002765 374 ------ENQDAIDAAIVGMLAD----------------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (883)
Q Consensus 374 ------~~~~~~~~ai~~~~~~----------------~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~ 431 (883)
...+|.|.|++.++.+ ....+..|+.++.+||+|+|||||+++++++|++.+++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 1137999999987632 122456789999999999999999999988888999999999
Q ss_pred HHHHHhccCC--hhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC-------------------------CCCCCCceE
Q 002765 432 EQILALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQL 484 (883)
Q Consensus 432 e~il~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~-------------------------~~~e~~l~~ 484 (883)
|.|+++|+.. ++.++.+.+.+++++++|+|||++|||.+++.+. +..|+||++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3456778899999999999999999999875321 346899999
Q ss_pred EEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcc----------------------
Q 002765 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL---------------------- 542 (883)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~---------------------- 542 (883)
+|+++++||||++++++|++|+++||++||+|||+.+||.+||++|||.++......+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997543211000
Q ss_pred -------------------------cCcccccccC---cchHHHHhhhcC--eEEEeCcccHHHHHHHHHHc-CCEEEEE
Q 002765 543 -------------------------LGQDKDASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMT 591 (883)
Q Consensus 543 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~ar~~P~~K~~iV~~l~~~-g~~v~~i 591 (883)
.|.......+ .+.+.++..++. ||||++|+||+++|+.+|+. +++|+|+
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 0000000000 123444555555 79999999999999999997 5899999
Q ss_pred cCCccCHHHHhhCCeeEEec--CccHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 592 GDGVNDAPALKKADIGIAVA--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668 (883)
Q Consensus 592 GDG~ND~~al~~AdvGIa~~--~~~~~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~ 668 (883)
|||+||+|||++|||||++. +|.+ |..+||+++.+.+ .+.+++ .|||+.|+|+.+.+.|.+++|+..++..+++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~q-A~~aSDfaI~~Fr--~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f 954 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQ-AVMASDFAMGQFR--FLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWY 954 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHH-HHHhhccchhhhH--HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874 4555 5559999996554 455554 4999999999999999999999998888888
Q ss_pred HHhhccC----ccHHHHHHHHHhhhhh-hhccc-cCCCCCC-------------CCCCchhHHHHHHHHHHHHHHHHHHH
Q 002765 669 ALIWKFD----FSPFMVLIIAILNDGT-IMTIS-KDRVKPS-------------PQPDSWKLKEIFATGVVLGSYLAIMT 729 (883)
Q Consensus 669 ~~~~~~~----l~~~~il~i~l~~~~~-~~~l~-~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~ 729 (883)
.++.++. +.++.+.+.|++...+ .+.++ +|+.-+. ++....+.+ .|..+++.|+++++++
T Consensus 955 ~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~-~F~~w~~~~i~qs~ii 1033 (1178)
T PLN03190 955 VLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK-LFWLTMIDTLWQSAVV 1033 (1178)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH-HHHHHHHHHHHHHHHH
Confidence 7765543 4556666777666554 45553 4443221 111122233 4555677799999988
Q ss_pred HHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHHHHHH-hhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHH
Q 002765 730 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQAL-IFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (883)
Q Consensus 730 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (883)
|++.++.+.... .+ .....+.+++.+++...+. ++.+++ |.|.... .+++++++.+++..++ .
T Consensus 1034 ff~~~~~~~~~~----~~-------~~~~~~~~~~~~v~~vnl~i~~~~~~--wt~~~~~--~i~~Si~~~~i~~~~~-~ 1097 (1178)
T PLN03190 1034 FFVPLFAYWAST----ID-------GSSIGDLWTLAVVILVNLHLAMDIIR--WNWITHA--AIWGSIVATFICVIVI-D 1097 (1178)
T ss_pred HHHHHHHhcCCC----cC-------ceeEhHhhhhHHHHHHHHHHHHHHhh--hhHHHHH--HHHHHHHHHHHHHHHH-H
Confidence 866554442211 01 0111233343434333333 333333 4332211 1122222211111111 1
Q ss_pred hhc-----cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 002765 809 YAN-----WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDT 857 (883)
Q Consensus 809 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 857 (883)
+.+ +.+..+ ...+.+|+.+++..++.++++.++|.+.|.++|......
T Consensus 1098 ~~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~ 1150 (1178)
T PLN03190 1098 AIPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIA 1150 (1178)
T ss_pred hcccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 000 011111 113446666677777888888999999888888664444
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-89 Score=777.46 Aligned_cols=704 Identities=22% Similarity=0.332 Sum_probs=526.9
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHH
Q 002765 25 EEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGI 104 (883)
Q Consensus 25 ~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i 104 (883)
.+.++......+||+.+++.+|+.-||+|.+..+.++.+..++++..+||...-.++.+++.. +.+++++..|
T Consensus 148 ~~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~-------d~Y~~YA~cI 220 (1140)
T KOG0208|consen 148 PRWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFYLFQAFSVALWLA-------DSYYYYAFCI 220 (1140)
T ss_pred hhhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchHHHHHhHHhhhhhc-------ccchhhhhHH
Confidence 344555555678999999999999999999999999999999999999995544443344333 2356666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeC-CCeeccceEEEecCCeEEEe
Q 002765 105 IVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL-GDIVPADARLLEGDPLKIDQ 183 (883)
Q Consensus 105 ~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~-Gd~vPaD~~ll~g~~l~Vde 183 (883)
+++.+.+...+.+++++.++.+..+-+ .+..++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.|||
T Consensus 221 ~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNE 298 (1140)
T KOG0208|consen 221 VIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNE 298 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeec
Confidence 777788888899999999888876554 3468999999999999999999999999998 8899999999999 799999
Q ss_pred ccccCCCcceecCCC-------------------CCccccceeec------ceEEEEEEEecchhhhhhhhhhhhcCCCC
Q 002765 184 SALTGESLPVTKNPY-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQV 238 (883)
Q Consensus 184 s~LTGEs~pv~K~~~-------------------~~v~aGt~v~~------G~~~~~V~~tG~~T~~g~i~~l~~~~~~~ 238 (883)
|+|||||+||.|.+. +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.++ +
T Consensus 299 smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P 377 (1140)
T KOG0208|consen 299 SMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-P 377 (1140)
T ss_pred ccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-C
Confidence 999999999999874 46899999986 569999999999999999887765543 2
Q ss_pred CcHHHHHHHHH--HHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCccc
Q 002765 239 GHFQKVLTAIG--NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (883)
Q Consensus 239 ~~~~~~~~~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilv 316 (883)
.+++-.-+.+. ..+.++.+++.+. .++.+...+.+....+.+++.++...+|+|||.++++...++.+||.|+||.|
T Consensus 378 ~~fkfyrds~~fi~~l~~ia~~gfiy-~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfC 456 (1140)
T KOG0208|consen 378 VNFKFYRDSFKFILFLVIIALIGFIY-TAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFC 456 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHH-HhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEE
Confidence 23332222222 1121111221221 12222345678888999999999999999999999999999999999999999
Q ss_pred ccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccc--cC----------------------CChH-HHHHHHHHhc
Q 002765 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA--KG----------------------VEKE-HVILLAARAS 371 (883)
Q Consensus 317 k~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~--~~----------------------~~~~-~~l~~~~~~~ 371 (883)
-+++.+...|++|++|||||||||++.+.+..+....-+ .+ ..+. .+....+.|.
T Consensus 457 isP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCH 536 (1140)
T KOG0208|consen 457 ISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCH 536 (1140)
T ss_pred cCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhc
Confidence 999999999999999999999999999998765541100 00 0010 1111122221
Q ss_pred c------ccCCChHHHHHHHhcC------------------------Chhh--------hh-cCceEEEeecCCCcCccE
Q 002765 372 R------TENQDAIDAAIVGMLA------------------------DPKE--------AR-AGVREVHFLPFNPVDKRT 412 (883)
Q Consensus 372 ~------~~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~~~~~~f~s~~k~~ 412 (883)
. ...+||+|..+.+..+ +|.+ .. ..+.+++.+||+|.-+||
T Consensus 537 SL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRM 616 (1140)
T KOG0208|consen 537 SLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRM 616 (1140)
T ss_pred eeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheE
Confidence 1 1135787765543221 0100 00 146788999999999999
Q ss_pred EEEEEcC-CCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCC--------CCCCCCCCce
Q 002765 413 ALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQ 483 (883)
Q Consensus 413 sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~--------~~~~~e~~l~ 483 (883)
||++.++ +.+..+|+|||||.|.+.|+ .+..++.+++.++.|+.+|+|++|+|+|+++.. .++..|.||+
T Consensus 617 SVIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~ 695 (1140)
T KOG0208|consen 617 SVIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLE 695 (1140)
T ss_pred EEEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccce
Confidence 9999865 46778999999999999998 456788899999999999999999999999865 3678899999
Q ss_pred EEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCC----------CCc------------
Q 002765 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------SSS------------ 541 (883)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~----------~~~------------ 541 (883)
|+|++.||+++|++++++|++|++|.||++|+||||..||..+||+||+..+... .+.
T Consensus 696 FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~ 775 (1140)
T KOG0208|consen 696 FLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQ 775 (1140)
T ss_pred eeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCc
Confidence 9999999999999999999999999999999999999999999999999642100 000
Q ss_pred --ccC--------------------cccccccC-----------cchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEE
Q 002765 542 --LLG--------------------QDKDASIA-----------ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHIC 588 (883)
Q Consensus 542 --~~~--------------------~~~~~~~~-----------~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v 588 (883)
..+ .+..-.++ .+.++.++.+..|||||+|+||.++|+.||+.|+.|
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~V 855 (1140)
T KOG0208|consen 776 TQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKV 855 (1140)
T ss_pred cccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEE
Confidence 000 00000112 233556667788999999999999999999999999
Q ss_pred EEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 589 GMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668 (883)
Q Consensus 589 ~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~ 668 (883)
+|||||+||+.|||+||+||+++++. |.-||.+.-.-.+.+.+++.|++||..+-.--..++|...+.+...+..+ .
T Consensus 856 gfCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~-~ 932 (1140)
T KOG0208|consen 856 GFCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV-F 932 (1140)
T ss_pred EecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh-e
Confidence 99999999999999999999998643 55688888888899999999999999877766677777666654433222 1
Q ss_pred HHhhccCccHHHHHHHHHhhhhh-hhccccCC----CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 002765 669 ALIWKFDFSPFMVLIIAILNDGT-IMTISKDR----VKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFS 743 (883)
Q Consensus 669 ~~~~~~~l~~~~il~i~l~~~~~-~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 743 (883)
+..-+..++-+|.+.+.++-..+ +..++..+ ..+.|+|.+...++.+.-.+..-+++++.-+..+++....+|+.
T Consensus 933 LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 933 LYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYE 1012 (1140)
T ss_pred eeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeecccccee
Confidence 12234568889999999887654 45554433 33344444444444443333333333333344444444555553
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=791.85 Aligned_cols=541 Identities=22% Similarity=0.313 Sum_probs=453.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC---CC---CCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eE
Q 002765 68 GFMWNPLSWVMEAAAIMAIALANG---GG---RDPDWQDF---VGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KT 137 (883)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~---~~---~~~~~~~~---~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~ 137 (883)
.||+||+.++++++++++++++.. .+ ....|+++ +.+++.+++...++.++|+|+++++++|+++.++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 578999999999999999997531 11 11246654 3344556777888889999999999999998877 48
Q ss_pred EEEE-CCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCC---ccccceeecceEE
Q 002765 138 KVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIE 213 (883)
Q Consensus 138 ~V~r-dg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~---v~aGt~v~~G~~~ 213 (883)
+|+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.||.|++|+. +|+||.+.+|++.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 89999999999999999999999999999999999 68999999999999999999975 8999999999999
Q ss_pred EEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCC
Q 002765 214 AVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (883)
Q Consensus 214 ~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~ 292 (883)
++|+++|.+|++||+.+++++++ +++|+|...+.+..++.+.+++..+. +..+.... .....+..++++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 99999999999999999998875 68999988777665543322221111 11111111 1223567789999999999
Q ss_pred cchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhcc
Q 002765 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (883)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (883)
+|+...+.....|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 88877777777899999999999999999999999999999999999999999998753 234566778888777766
Q ss_pred ccCCChHHHHHHHhcCChh--hhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCC-hhHHHHHH
Q 002765 373 TENQDAIDAAIVGMLADPK--EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (883)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~--~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 449 (883)
.+ .||.+.|+++++.+.. .....++..++.||++.++++++.+. +| ..+.||++|.+++.|+.. ...++.++
T Consensus 341 ~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 AD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 54 4999999988764321 11112345678999999877765433 45 568999999999888532 22345677
Q ss_pred HHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHH
Q 002765 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (883)
Q Consensus 450 ~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~ 529 (883)
+.+++++++|.|++++|++. +++|+++++||+|||++++|++||++|++++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88889999999999999854 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 530 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
+|+++ +++|++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~~------------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVDD------------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCCE------------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 99842 699999999999999999999999999999999999999999999
Q ss_pred ecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 663 (883)
Q Consensus 610 ~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~ 663 (883)
|++|+++|+++||++++||||+++++++++||+++-+......|+++.+++--+
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~ 586 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYF 586 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHH
Confidence 999999999999999999999999999999999999999999999888775443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-86 Score=770.97 Aligned_cols=507 Identities=28% Similarity=0.389 Sum_probs=440.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE-CCeEEEeecCCCCCCcEEEEeCCCeeccceEEEe
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (883)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~ 175 (883)
+|.+++++++++.+...++.+...|+++++++|.++.|.++++++ ||++++||.++|+|||+|.|+|||+||+||++++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 447788889999999999999999999999999999999997777 5668999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHH
Q 002765 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (883)
Q Consensus 176 g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~ 254 (883)
| ...||||++||||.||.|.+||.|++||.+.+|..+.+|+++|.+|.+++|.+++++++ ++++.|+..|+++.++..
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 56899999999999999999999999999999999999999999999999999999986 889999999999998877
Q ss_pred HHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEec
Q 002765 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (883)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~D 334 (883)
.+++..++.++++++....+|..++..++++++++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 44443444344333333468899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEE
Q 002765 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (883)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv 414 (883)
||||||+|+|+|+++.. .. + ++++++.+++..+..++ ||+..||++++.+.. ....+..+.+|- +.-..
T Consensus 412 KTGTLT~G~p~v~~v~~--~~-~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G---~Gv~~- 480 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA--LD-G-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG---RGVEA- 480 (713)
T ss_pred CCCCCcCCceEEEEEec--CC-C-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc---CcEEE-
Confidence 99999999999998763 22 3 77889999988877766 999999999765322 111222333331 11111
Q ss_pred EEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCC
Q 002765 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (883)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~l 494 (883)
..+| ..+..|+++.+.+.-. +... ..+..+.+.++|..++.++.+. +++|+++++|++
T Consensus 481 ---~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 481 ---EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred ---EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 1245 4567799987654211 1111 4556778888999999999876 899999999999
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccH
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (883)
Q Consensus 495 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 574 (883)
|||++++|++||+.|+++.|+||||..+|.++|+++||++ +++.+.||||
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------VRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------------------heccCCcHHH
Confidence 9999999999999999999999999999999999999953 6999999999
Q ss_pred HHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (883)
Q Consensus 575 ~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (883)
.++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|+++++..++.+++.+|+++++||+|+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 002765 655 VSITIRIVLGFML 667 (883)
Q Consensus 655 l~~ni~~~~~~~~ 667 (883)
+.+|...++...+
T Consensus 669 ~~yn~~~iplA~~ 681 (713)
T COG2217 669 FGYNAIAIPLAAG 681 (713)
T ss_pred HHHHHHHHHHHHH
Confidence 9999876655443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-81 Score=750.32 Aligned_cols=501 Identities=26% Similarity=0.359 Sum_probs=436.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEec
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (883)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g 176 (883)
.|.++++++++++++..++.++++|+++.+++|+++.|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHH
Q 002765 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (883)
Q Consensus 177 ~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 255 (883)
...||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+|||.+++++++ +++|+|+.++++++++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999998875 7899999999999987665
Q ss_pred HHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEecc
Q 002765 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (883)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DK 335 (883)
+++..++.+++++...+.+|..++..++++++++|||+|.+++|++...+..+++|+|+++|+++++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 55433333333334455678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEEE
Q 002765 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (883)
Q Consensus 336 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv~ 415 (883)
|||||+|+|+|.++.. ..+.++++++.+++..+.. ..||++.|+++++.+. +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999998753 2245677788877766544 4599999999876421 11 24666655554321
Q ss_pred -EE-cCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCC
Q 002765 416 -YI-DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (883)
Q Consensus 416 -~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~ 493 (883)
++ ..+|+. +..|+++.+.+ ..+.+.+.++.+.++|+|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 11 234543 44689888654 11234455678899999999999865 89999999999
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCccc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 573 (883)
+|||++++|++||++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999984 266789999
Q ss_pred HHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHH
Q 002765 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (883)
Q Consensus 574 K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (883)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|++.++++||+++.++++..++.++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 002765 654 AVSITIRIVLGF 665 (883)
Q Consensus 654 ~l~~ni~~~~~~ 665 (883)
++.+|+..+...
T Consensus 697 a~~~n~~~i~~a 708 (741)
T PRK11033 697 ALGLKAIFLVTT 708 (741)
T ss_pred HHHHHHHHHHHH
Confidence 999997654433
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-81 Score=712.61 Aligned_cols=539 Identities=23% Similarity=0.326 Sum_probs=451.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCe-EEEeecCCCCCCcEEEEeCCCeeccceEEE
Q 002765 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLL 174 (883)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll 174 (883)
..|.++.+++.++.+...++.....|+..++..|.++.|.++.++.+|+ +++||.+.+++||+|.|+||++||+||+++
T Consensus 339 tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv 418 (951)
T KOG0207|consen 339 TFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV 418 (951)
T ss_pred hhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE
Confidence 3444566677788888888888888999999999999999999999997 899999999999999999999999999999
Q ss_pred ecCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHH
Q 002765 175 EGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCI 253 (883)
Q Consensus 175 ~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~ 253 (883)
+| +.+||||.+|||++||.|++|+.|.+||.+.+|.....++++|.+|.+++|.+++++++ .+.|.|+.+|+++.++.
T Consensus 419 ~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFv 497 (951)
T KOG0207|consen 419 DG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFV 497 (951)
T ss_pred eC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCC
Confidence 99 68999999999999999999999999999999999999999999999999999999997 88999999999999876
Q ss_pred HHHHHHHHHHHHhhhhccc----------cchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhh
Q 002765 254 CSIAVGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 323 (883)
Q Consensus 254 ~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE 323 (883)
..+++..++.++++..+.. ..+..++..++++++++|||+|.+++|++...|....+++|+++|..+++|
T Consensus 498 P~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE 577 (951)
T KOG0207|consen 498 PVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALE 577 (951)
T ss_pred chhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHH
Confidence 5554433333322222211 345567888999999999999999999999999999999999999999999
Q ss_pred hcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEee
Q 002765 324 EMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFL 403 (883)
Q Consensus 324 ~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~ 403 (883)
.+.++++++||||||||+|++.|.+... ..+..+..+.+.+++..+..+ .||+..|+++++.+.......-....+.
T Consensus 578 ~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~S-eHPig~AIv~yak~~~~~~~~~~~~~~~ 654 (951)
T KOG0207|consen 578 KAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGS-EHPIGKAIVDYAKEKLVEPNPEGVLSFE 654 (951)
T ss_pred HHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCC-cCchHHHHHHHHHhcccccCccccceee
Confidence 9999999999999999999999998764 333356667777766555444 4999999999986433111111112222
Q ss_pred cCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCce
Q 002765 404 PFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ 483 (883)
Q Consensus 404 ~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~ 483 (883)
.|........+. .+|+. .+-|+-+.+...- ....+.++..+++....|..+.+++..+ +
T Consensus 655 ~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~ 713 (951)
T KOG0207|consen 655 YFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------Q 713 (951)
T ss_pred cccCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------E
Confidence 222222221111 23433 6678888765421 2233457777888889999999999988 9
Q ss_pred EEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002765 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (883)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (883)
++|++.++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++|++.
T Consensus 714 l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------------------------- 764 (951)
T KOG0207|consen 714 LVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------------------------- 764 (951)
T ss_pred EEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------------------
Confidence 999999999999999999999999999999999999999999999999742
Q ss_pred CeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHH
Q 002765 564 DGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 643 (883)
Q Consensus 564 ~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~ 643 (883)
|||.+.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+|+.|+++|.++||+||+++++..++.+++.+|++
T Consensus 765 -V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt 843 (951)
T KOG0207|consen 765 -VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKT 843 (951)
T ss_pred -EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccHHHHHHHHHhhh
Q 002765 644 FQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILND 689 (883)
Q Consensus 644 ~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~l~~~~il~i~l~~~ 689 (883)
++|+|.|+.|++.+|+..++...+.++.+++.++|+.--....++.
T Consensus 844 ~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SS 889 (951)
T KOG0207|consen 844 VKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASS 889 (951)
T ss_pred HhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhh
Confidence 9999999999999999877777777766776677766544444443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-77 Score=698.75 Aligned_cols=474 Identities=36% Similarity=0.552 Sum_probs=416.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEE
Q 002765 105 IVLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182 (883)
Q Consensus 105 ~~~i~~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vd 182 (883)
+++++++..++.++++++++..++|++ ..+++++|+||| +++|++++|+|||+|.+++||+|||||++++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 356678888999999999999999998 788899999999 99999999999999999999999999999999 79999
Q ss_pred eccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 002765 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGI 260 (883)
Q Consensus 183 es~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 260 (883)
||+|||||.|+.|.+++.+++||.+.+|+..+.|+++|.+|..+++..++.++. .++++++..+++. .+++..+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998775 4788899999988 45443333222
Q ss_pred HHHHHhhhhcc-cc--chHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCC
Q 002765 261 VAEIIIMYPVQ-HR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 337 (883)
Q Consensus 261 ~~~~~~~~~~~-~~--~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTG 337 (883)
++. ++.|... .. +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||++|++||||||
T Consensus 161 ~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTG 239 (499)
T TIGR01494 161 LAV-FLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTG 239 (499)
T ss_pred HHH-HHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCC
Confidence 222 2222222 12 3778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEEEEE
Q 002765 338 TLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYI 417 (883)
Q Consensus 338 TLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv~~~ 417 (883)
|||+|+|++.++... . + ....+||++.|+++++.. +..+..||++.+++|+++++
T Consensus 240 TLT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~ 294 (499)
T TIGR01494 240 TLTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVR 294 (499)
T ss_pred ccccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEe
Confidence 999999999987641 1 0 123459999999987642 12356799999999998887
Q ss_pred cCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCC
Q 002765 418 DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHD 497 (883)
Q Consensus 418 ~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~ 497 (883)
..++ .++||+++.+.+.|.. +.+..++++++|+|++++|++. +++|++.++|++|++
T Consensus 295 ~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~ 351 (499)
T TIGR01494 295 GPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDD 351 (499)
T ss_pred cCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchh
Confidence 5333 4789999999998852 2334556788999999999886 899999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHH
Q 002765 498 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEI 577 (883)
Q Consensus 498 ~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~i 577 (883)
++++|+.|+++|++++|+|||++.+|..+|+++|+ +++++|+||.++
T Consensus 352 ~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~ 398 (499)
T TIGR01494 352 AKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAAL 398 (499)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHH
Confidence 99999999999999999999999999999999986 688999999999
Q ss_pred HHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 657 (883)
Q Consensus 578 V~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ 657 (883)
|+.+|+.|+.|+|+|||.||+|||++|||||+|+ |+++||++++++++..++.++.+||++++++++++.|.+++
T Consensus 399 v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~ 473 (499)
T TIGR01494 399 VEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAY 473 (499)
T ss_pred HHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002765 658 TIRIVLGFML 667 (883)
Q Consensus 658 ni~~~~~~~~ 667 (883)
|+..++..++
T Consensus 474 n~~~~~~a~~ 483 (499)
T TIGR01494 474 NLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHH
Confidence 9976555443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-80 Score=738.04 Aligned_cols=795 Identities=17% Similarity=0.202 Sum_probs=563.0
Q ss_pred HHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002765 46 RLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (883)
Q Consensus 46 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~ 121 (883)
+...|-.|.+.+.|++.+ +.+++||.++.++++++.++++++.. .+...|...+.+++++.+.++-+.++++|
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~---~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPL---SPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcc---cccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999998754 78899999999999999999999852 24456677777888888999999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEECCe-EEEeecCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCcceecC
Q 002765 122 AGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKN 196 (883)
Q Consensus 122 ~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~----~l~Vdes~LTGEs~pv~K~ 196 (883)
+.+.... .+..++.|.|++. +++..|+++++||+|++..++.+|||.++++++ .|+|++++|+||++.+.|+
T Consensus 105 R~~~D~~---iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKE---VNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHH---hhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 8887654 4557889998644 899999999999999999999999999999764 4999999999999998885
Q ss_pred CC-----------------------------------------------CCccccceeecce-EEEEEEEecchhhhhhh
Q 002765 197 PY-----------------------------------------------DEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 228 (883)
Q Consensus 197 ~~-----------------------------------------------~~v~aGt~v~~G~-~~~~V~~tG~~T~~g~i 228 (883)
.- ++++.|+++.+.. +.++|+.||.+|.+++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 31 2467788888765 79999999999987653
Q ss_pred hhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhcc---c--------c-----chHhHHHHHHHHHHhhc
Q 002765 229 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQ---H--------R-----KYRDGIDNLLVLLIGGI 290 (883)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~~---~--------~-----~~~~~~~~~~~llv~~i 290 (883)
.. ....+++++++.++.....+++.++..+++..+. .|... . . .....+..++.++...+
T Consensus 262 ~~--~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SG--KPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cC--CCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 22 2334778888888887655433322212221111 11110 0 0 01223556778888999
Q ss_pred CCcchHHHHHHHHHHHHHhh----------ccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCCh
Q 002765 291 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360 (883)
Q Consensus 291 P~~L~~~~~~~~~~~~~~l~----------~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 360 (883)
|.+|++.+.+....++.-+. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.++...++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999988874432 35788999999999999999999999999999999999887543322110
Q ss_pred --------------------------------------------HHHHHHHHHhccc-------------cCCChHHHHH
Q 002765 361 --------------------------------------------EHVILLAARASRT-------------ENQDAIDAAI 383 (883)
Q Consensus 361 --------------------------------------------~~~l~~~~~~~~~-------------~~~~~~~~ai 383 (883)
.+.....+.|... ..+.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0112222222110 1135778888
Q ss_pred HHhcCCh---------h-------hhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhcc-CChhHHH
Q 002765 384 VGMLADP---------K-------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRK 446 (883)
Q Consensus 384 ~~~~~~~---------~-------~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 446 (883)
+..+.+. + .....|+.++.++|+|.||||||++++++|+..++||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7765321 0 013578999999999999999999999999999999999999999998 4556778
Q ss_pred HHHHHHHHHHHccCeEEEEEeeccCCCC-------------------------CCCCCCCceEEEeeccCCCCCCChHHH
Q 002765 447 KVHAVIDKFAERGLRSLGVARQEIPEKT-------------------------KESPGAPWQLVGLLPLFDPPRHDSAET 501 (883)
Q Consensus 447 ~~~~~~~~~~~~G~r~l~~A~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~ 501 (883)
+.++++++++.+|+|+||+|||++++++ .+.+|+||+++|.+++||+++++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 8889999999999999999999998754 235799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccC-------------------------------------
Q 002765 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG------------------------------------- 544 (883)
Q Consensus 502 I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~------------------------------------- 544 (883)
|+.|++||||+||+|||+.+||.+||..|++..+....-.+..
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 9999999999999999999999999999999764322111100
Q ss_pred --------cccccccCcchHH---HHhh--hcCeEEEeCcccHHHHHHHHHHc-CCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 545 --------QDKDASIAALPVD---ELIE--KADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 545 --------~~~~~~~~~~~~~---~~~~--~~~v~ar~~P~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
......+++++.. ++.. +..+|||++|.||+.+|+..++. +.++++||||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 0000011111111 1111 34589999999999999999754 89999999999999999999999999
Q ss_pred c--CccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----ccHHHHHHH
Q 002765 611 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFD----FSPFMVLII 684 (883)
Q Consensus 611 ~--~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~----l~~~~il~i 684 (883)
+ +|.+++. +||+.+.+.+|.....++ |||+.|.|+.+++.|.+++|+...+..+++.++.++. +.++++.+.
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 6 5666555 999999998888877666 9999999999999999999999998888888776543 444555555
Q ss_pred HHhhhhh-hhccccCCCCCC-------C-------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Q 002765 685 AILNDGT-IMTISKDRVKPS-------P-------QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 749 (883)
Q Consensus 685 ~l~~~~~-~~~l~~~~~~~~-------~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 749 (883)
|++...+ ++.++.-..+.+ | +...++. +.+..+++.|+++++++|++.+..+... .....|..
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~-~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G~~ 975 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNW-KRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNGLT 975 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccch-HHHHHHHHHHHHhheeeeeeeHhhheee-eeccCCCc
Confidence 5554433 455553222211 1 1122333 4455566779999999887666555322 11111211
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHhhhhccCCCCcccCchHHHHHHHHHHHHHHHHHHHhhc-----c---ccccccccc
Q 002765 750 SLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYAN-----W---SFARIEGCG 821 (883)
Q Consensus 750 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~ 821 (883)
.+.....+..|+.+++...+. ...-+.+|.|.+.. .+++++++.+++..++....+ . +........
T Consensus 976 ---~d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i--~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1151)
T KOG0206|consen 976 ---ADYWTLGTTVFTIIVIVVNLK-IALETSYWTWINHI--VIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSS 1049 (1151)
T ss_pred ---CChhhccceEEEEEEEEEEee-eeeeehheeHHHHH--HHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcC
Confidence 111112233333333222222 12222334444322 223333333222222211000 0 111122234
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q 002765 822 WGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTL 858 (883)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~ 858 (883)
..+|+.+++.++++++++..+|.+.+.++|.+....+
T Consensus 1050 p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~ 1086 (1151)
T KOG0206|consen 1050 PSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQ 1086 (1151)
T ss_pred chHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHH
Confidence 4577787888999999999999999999987765444
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-76 Score=694.45 Aligned_cols=519 Identities=26% Similarity=0.370 Sum_probs=434.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECC-eEEEeecCCCCC
Q 002765 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILVP 155 (883)
Q Consensus 77 ~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg-~~~~I~~~~Lv~ 155 (883)
++.++++++++.+ .|.++.+++++++++..+++++++|+++.+++|.+..|++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3445566667665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcC
Q 002765 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (883)
Q Consensus 156 GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~ 235 (883)
||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.++++++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999998876
Q ss_pred C-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCc
Q 002765 236 N-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (883)
Q Consensus 236 ~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (883)
+ +++++++.++++++++...+++..++.+++ |...... .++..++++++++|||+||++++++++.+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~-~~~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVV-WLALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 4 788999999999988665444433332322 2222222 78889999999999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCC--hHHHHHHHHHhccccCCChHHHHHHHhcCChhh
Q 002765 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPKE 392 (883)
Q Consensus 315 lvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~ 392 (883)
++|+++++|++|++|++|||||||||+|+|+|.++... .+.+ +++++.+++..+.. ..||++.|+++++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL---DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec---CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999987631 1222 56777777666554 459999999988753211
Q ss_pred hhcCce-EEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccC
Q 002765 393 ARAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIP 471 (883)
Q Consensus 393 ~~~~~~-~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~ 471 (883)
.... + ..+++| .+..... .+|. ..+..|+++.+ + .+ ..+ .+..+..++.+.++|+|+++++.+.
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~-~~-~~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-E-LA-AEP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-h-hc-CCC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111111 1111111 1331 24556888765 1 11 111 1223455667889999999999765
Q ss_pred CCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCC-CeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccc
Q 002765 472 EKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (883)
Q Consensus 472 ~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aG-i~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~ 550 (883)
+++|.+.++|++|||++++|++|+++| +++.|+|||+..++..+++++|+..
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------- 426 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------- 426 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------
Confidence 899999999999999999999999999 9999999999999999999999842
Q ss_pred cCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCc
Q 002765 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 630 (883)
Q Consensus 551 ~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~ 630 (883)
+|+++.|++|.++++.+++.++.|+|+|||.||++|+++||+|+++|++++.+++.||+++.++++
T Consensus 427 --------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 427 --------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred --------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666 (883)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~ 666 (883)
+.+.+++++||++++||++++.|++.+|+..++..+
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987654433
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-76 Score=693.42 Aligned_cols=500 Identities=30% Similarity=0.409 Sum_probs=427.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCC
Q 002765 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156 (883)
Q Consensus 77 ~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~G 156 (883)
++.++++++++.+ +|.++.+++++++++..+++++++|+++.+++|.++.+++++|+|||++++|++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4556777777775 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC
Q 002765 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 236 (883)
Q Consensus 157 Div~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~ 236 (883)
|+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+|++.+++++++
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 67999999999999999999999999999999999999999999999999999998765
Q ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcc
Q 002765 237 -QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (883)
Q Consensus 237 -~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (883)
+++++++.++++++++...+++..++.+++++... .+..++.+++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 78899999999998866655443333333333222 233378889999999999999999999999999999999999
Q ss_pred cccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhc
Q 002765 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (883)
Q Consensus 316 vk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (883)
+|+++++|++|++|++|||||||||+|+|+|.++.. .+++.+++..+. ...||++.|+++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999988652 256777665444 345999999998865321
Q ss_pred CceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC
Q 002765 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (883)
Q Consensus 396 ~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~ 475 (883)
.....+.+|. +.... ..+|+. +..|+++.+.+.. .+.+..+|.+++.++.+.
T Consensus 300 ~~~~~~~~~g----~gi~~---~~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG----EGVRA---VVDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC----CeEEE---EECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC------
Confidence 2222222221 11111 124543 3468887643311 014566788888887654
Q ss_pred CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCC-eEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcc
Q 002765 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554 (883)
Q Consensus 476 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~ 554 (883)
++.|.+.++|++|||++++|++|+++|+ ++.|+|||+..++..+++++|+..
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-------------------- 404 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-------------------- 404 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh--------------------
Confidence 8999999999999999999999999999 999999999999999999999842
Q ss_pred hHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-CccHHHHhccCEEeccCCchHH
Q 002765 555 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 633 (883)
Q Consensus 555 ~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~~~a~~aad~vl~~~~~~~i 633 (883)
+|+++.|++|.++++.++++++.|+|+|||.||++|+++||+||++| ++++.++++||+++.+++++.+
T Consensus 405 ----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 405 ----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 57888999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 634 ISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665 (883)
Q Consensus 634 ~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~ 665 (883)
.+++.+||++++|+++++.|++.+|+..++..
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 506 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILLA 506 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997654433
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-76 Score=689.76 Aligned_cols=505 Identities=26% Similarity=0.382 Sum_probs=424.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC-CeEEEeecCCCCCCcEEEEeCCCeeccceEEEe
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (883)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~ 175 (883)
+|..+.++++++.++..++.+.++|+++.+++|.+..|.+++++|+ |++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555666777888888999999999999999999999999999985 667999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHH
Q 002765 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (883)
Q Consensus 176 g~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~ 254 (883)
| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|+++|.+|.+||+.+++++++ +++++++..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 57999999999999999999999999999999999999999999999999999998875 789999999999988765
Q ss_pred HHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEec
Q 002765 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (883)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~D 334 (883)
.+++..++ .++.| ..++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~-~~~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALI-TFVIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHH-HHHHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 54432222 22222 24788999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEEE
Q 002765 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (883)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~sv 414 (883)
||||||+|+|+|.++.. ..+.++++++.+++..+..++ ||++.|+++++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998753 224556778888877666554 9999999988743211111112222222 111121
Q ss_pred EEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCC
Q 002765 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (883)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~l 494 (883)
. .+| ..+..|+++.+.+... . +.++.++|.+++.++.+. +++|.+.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1 245 3466799887643211 1 112346899999988765 899999999999
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccH
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (883)
Q Consensus 495 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 574 (883)
||+++++|++||+.|++++|+|||+..++..+++++|++ +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999983 4788899999
Q ss_pred HHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 002765 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (883)
Q Consensus 575 ~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (883)
.++++.++++++.|+|+|||.||+||+++||+||+||++++.++++||+++.+++++.+..+++.||+++++|++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCccH
Q 002765 655 VSITIRIVLGFMLIALIWKFDFSP 678 (883)
Q Consensus 655 l~~ni~~~~~~~~~~~~~~~~l~~ 678 (883)
+.+|+..++..+...+.+++.++|
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p 559 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSP 559 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCC
Confidence 999997665555444444444555
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-75 Score=713.52 Aligned_cols=520 Identities=24% Similarity=0.308 Sum_probs=436.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEec
Q 002765 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (883)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g 176 (883)
+|..+.++++++.++..++.+.+.|+++++++|.++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 33446778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCCCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHH
Q 002765 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (883)
Q Consensus 177 ~~l~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 255 (883)
...||||+|||||.|+.|++||.+|+||.+.+|.+.++|+++|.+|.+|+|.+++++++ .++++|+..++++++++..
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999998875 7889999999999886655
Q ss_pred HHHHHHHHHHhhhhcccc--chHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEe
Q 002765 256 IAVGIVAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 333 (883)
Q Consensus 256 i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~ 333 (883)
+++..++.+ +.|...+. .|..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+++++|++||
T Consensus 444 v~~~a~~~~-~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSA-AIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHH-HHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 444232222 23332222 255678889999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCCcCccEE
Q 002765 334 DKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA 413 (883)
Q Consensus 334 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s~~k~~s 413 (883)
|||||||+|+|+|.+... ..+.++++++.+++..+...+ ||++.|+++++.+.. .... .+|.....+ .
T Consensus 523 DKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~-G 590 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQV-----NGFRTLRGL-G 590 (834)
T ss_pred cCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCc-----ccceEecce-E
Confidence 999999999999987652 224566777887776665544 999999988764211 0111 122222211 1
Q ss_pred EEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCC
Q 002765 414 LTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (883)
Q Consensus 414 v~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~ 493 (883)
+.. ..+|+ .+.+|+++.+.+... ..+.+.+.++++.++|.++++++++. +++|++.++|+
T Consensus 591 v~~-~~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 591 VSG-EAEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EEE-EECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 111 12453 456799997654221 12345566778889999999999876 79999999999
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCccc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 573 (883)
+||+++++|++|++.|+++.|+|||+..++..+++++|+.. +|+++.|++
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~ 700 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDG 700 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHH
Confidence 99999999999999999999999999999999999999842 688999999
Q ss_pred HHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHH
Q 002765 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (883)
Q Consensus 574 K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (883)
|.++++.++++++.|+|+|||.||+||+++||+||+||+|++.++++||+++++++++.|..++++||++++||++|+.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hccCccHHH
Q 002765 654 AVSITIRIVLGFMLIALI-WKFDFSPFM 680 (883)
Q Consensus 654 ~l~~ni~~~~~~~~~~~~-~~~~l~~~~ 680 (883)
++.+|+..++..++.+.. .++.++|+.
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~ 808 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVV 808 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHH
Confidence 999998766544422211 222466654
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-76 Score=640.10 Aligned_cols=768 Identities=20% Similarity=0.237 Sum_probs=531.5
Q ss_pred HHHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC-CCchhhHHHHHHHHHHHHHHHHHHH
Q 002765 45 HRLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGR-DPDWQDFVGIIVLLVINSTISFIEE 119 (883)
Q Consensus 45 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~-~~~~~~~~~i~~~i~~~~~~~~~~e 119 (883)
.++++|-+|.+..+|++.+ ..+++||+-++++++++.++..++.....+. ..+|...++++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5667899999999887643 5677888888888888888777764332222 2366666777777777788888888
Q ss_pred HHHHHHHHHHhhcCCCeEEEE-ECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCccee
Q 002765 120 NNAGNAAAALMANLAPKTKVL-RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVT 194 (883)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~V~-rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~----~l~Vdes~LTGEs~pv~ 194 (883)
+++.+..+ +...+++ |||...+ |++++++||+|.++.+++||||.++++.+ ++.|.+-.|+||+..+.
T Consensus 154 ~~rd~~~N------se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRELN------SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhhhh------hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 77765433 3344444 6776555 99999999999999999999999999642 68999999999998776
Q ss_pred cCC-----------------------------------------------CCCccccceeecceEEEEEEEecchhhhhh
Q 002765 195 KNP-----------------------------------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (883)
Q Consensus 195 K~~-----------------------------------------------~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~ 227 (883)
|-| .|+++++|.+.+|.+.|+|++||.+|+
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR--- 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR--- 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH---
Confidence 643 257999999999999999999999996
Q ss_pred hhhhhhcCC---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002765 228 AAHLVDSTN---QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (883)
Q Consensus 228 i~~l~~~~~---~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~ 304 (883)
..++.+. +...++..+|.+.+.+.+.+++..++ .......+..|...+.+++.++...||.+|-+.+.++...
T Consensus 304 --svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 304 --SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred --HHhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 2333332 45667888888888866554442222 2222234578888999999999999999999999999999
Q ss_pred HHHHhhcc----CcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCCh--------------------
Q 002765 305 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK-------------------- 360 (883)
Q Consensus 305 ~~~~l~~~----~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------------------- 360 (883)
-++.+.++ |.++|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 88888764 678999999999999999999999999999999999886432211110
Q ss_pred ---------------HHHHHHHHHhcccc---C--------CChHHHHHHHhcC-----------------ChhhhhcCc
Q 002765 361 ---------------EHVILLAARASRTE---N--------QDAIDAAIVGMLA-----------------DPKEARAGV 397 (883)
Q Consensus 361 ---------------~~~l~~~~~~~~~~---~--------~~~~~~ai~~~~~-----------------~~~~~~~~~ 397 (883)
+.+..++.+....+ + ..|.+.|+++.-+ .+......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 01111222111110 0 1344444433211 011122478
Q ss_pred eEEEeecCCCcCccEEEEEEcC-CCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCC-
Q 002765 398 REVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK- 475 (883)
Q Consensus 398 ~~~~~~~f~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~- 475 (883)
++++.+||+|++|||.++++++ .++...+.|||+-+|..... ..+++++....||++|+|++.+|.|.+++++.
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc----cchhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999986 58899999999988766554 35678888999999999999999999986541
Q ss_pred -------------------------CCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHh
Q 002765 476 -------------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (883)
Q Consensus 476 -------------------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 530 (883)
..+|++|.++|+.+.||+++++++.+++.||+|||++||+|||+.+||+.||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 1368999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcc--------------------------cCcccccc--cCcchHHHHhhh--cCeEEEeCcccHHHHHHH
Q 002765 531 GMGTNMYPSSSL--------------------------LGQDKDAS--IAALPVDELIEK--ADGFAGVFPEHKYEIVKR 580 (883)
Q Consensus 531 Gi~~~~~~~~~~--------------------------~~~~~~~~--~~~~~~~~~~~~--~~v~ar~~P~~K~~iV~~ 580 (883)
++.........+ .|...+.. .-.+|+-++..+ ..++||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 986532211111 11110000 001233333332 358999999999999999
Q ss_pred HHHc-CCEEEEEcCCccCHHHHhhCCeeEEe-c-CccHHHHhccCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 002765 581 LQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVS 656 (883)
Q Consensus 581 l~~~-g~~v~~iGDG~ND~~al~~AdvGIa~-~-~~~~~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~ 656 (883)
+|+. |..|+++|||.||++|+++||+||++ | +|.+ |.-|||+.+. .|+.+-+++ -|||..|+|-.+.-+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQ-ASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQ-ASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccc-cchhccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9986 89999999999999999999999998 4 4544 5569999995 466666655 4899999999988888765
Q ss_pred HHHHHHHHHHHHHH-hhccCccHHH----HHHHHHhhhhhhhccccCCCCCCC----CC---------CchhHHHHHHHH
Q 002765 657 ITIRIVLGFMLIAL-IWKFDFSPFM----VLIIAILNDGTIMTISKDRVKPSP----QP---------DSWKLKEIFATG 718 (883)
Q Consensus 657 ~ni~~~~~~~~~~~-~~~~~l~~~~----il~i~l~~~~~~~~l~~~~~~~~~----~~---------~~~~~~~~~~~~ 718 (883)
....+..+..++.. ++-.|..-.| +.+..+.+-++..++-.|+.-.+. .| +....+. |..+
T Consensus 853 RGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKt-F~iw 931 (1051)
T KOG0210|consen 853 RGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKT-FFIW 931 (1051)
T ss_pred hhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhh-hhhh
Confidence 55443333322221 1111222222 223333333344566555532210 11 2222343 4445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhhHHHHHHHHHHHHHHHH-hhhhccCCCCcccCchHHHHHHHH
Q 002765 719 VVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQAL-IFVTRSRSWSFIERPGLLLATAFV 797 (883)
Q Consensus 719 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~ 797 (883)
++++++++.+...++++.... ......++.|..+++..++. ++..++|+| .++++-+
T Consensus 932 vLISiYQG~vim~g~~~l~~~--------------ef~~ivaisFtaLi~tELiMVaLtv~tw~~--------~m~vae~ 989 (1051)
T KOG0210|consen 932 VLISIYQGSVIMYGALLLFDT--------------EFIHIVAISFTALILTELIMVALTVRTWHW--------LMVVAEL 989 (1051)
T ss_pred hhHHHHcccHHHHHHHHHhhh--------------hheEeeeeeeHHHHHHHHHHHhhhhhhhhH--------HHHHHHH
Confidence 566888887777654444322 12234467788888887765 455565433 3444444
Q ss_pred HHHHHHHHHHHhhcccccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 002765 798 IAQLVATFIAVYANWSFAR-IEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDT 857 (883)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 857 (883)
+++.+......+.. .++. ---.+|.+++-+.++.++..++..+.|.++|++.|+...++
T Consensus 990 lsL~~Yivsl~~l~-~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl 1049 (1051)
T KOG0210|consen 990 LSLALYIVSLAFLH-EYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKL 1049 (1051)
T ss_pred HHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhc
Confidence 44433222111110 1110 11124445444556677777888999999999999887665
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-73 Score=629.49 Aligned_cols=559 Identities=25% Similarity=0.287 Sum_probs=422.7
Q ss_pred CCCCHH-HHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 002765 36 EGLTSD-EGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (883)
Q Consensus 36 ~GLs~~-e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ 114 (883)
+|+..+ |++.-.++||.|......+++-..|.+....||+.+-.++..+ |.+. .+|+..++-+++++.....
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgL-WCLD------eyWYySlFtLfMli~fE~t 233 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGL-WCLD------EYWYYSLFTLFMLIAFEAT 233 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHH-HHhH------HHHHHHHHHHHHHHHHHHH
Confidence 577643 3333344599999999999988889999999995554444444 4442 5899888888887777666
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEeecCCCCCCcEEEEeC---CCeeccceEEEecCCeEEEeccccCCCc
Q 002765 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL---GDIVPADARLLEGDPLKIDQSALTGESL 191 (883)
Q Consensus 115 ~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~---Gd~vPaD~~ll~g~~l~Vdes~LTGEs~ 191 (883)
-..|+.+.-+.+... ...|..+.|+|+++|+.+..+||.|||+|.+.. ...||||.+|++| .|.|||++|||||.
T Consensus 234 lV~Qrm~~lse~R~M-g~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G-sciVnEaMLtGESv 311 (1160)
T KOG0209|consen 234 LVKQRMRTLSEFRTM-GNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG-SCIVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHHHhc-CCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-ceeechhhhcCCCc
Confidence 666666665544332 234557899999999999999999999999987 5689999999999 69999999999999
Q ss_pred ceecCCC-----------------CCccccceeec-------------ceEEEEEEEecchhhhhhhhhhhhc-CCCCCc
Q 002765 192 PVTKNPY-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGKAAHLVDS-TNQVGH 240 (883)
Q Consensus 192 pv~K~~~-----------------~~v~aGt~v~~-------------G~~~~~V~~tG~~T~~g~i~~l~~~-~~~~~~ 240 (883)
|..|.+- ..+|+||.+++ |-+.+.|++||.+|..|++.+.+-- +++-+.
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 9999762 36899999985 5689999999999999998775533 332221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc------ccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCc
Q 002765 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ------HRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (883)
Q Consensus 241 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (883)
-.+. .+ .+++.+++ ++++...|.+. .++-...++-+..++...+|..||+-++++...+...++|.++
T Consensus 392 Nn~E--tf--~FILFLlV--FAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~v 465 (1160)
T KOG0209|consen 392 NNRE--TF--IFILFLLV--FAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGV 465 (1160)
T ss_pred ccHH--HH--HHHHHHHH--HHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhce
Confidence 1111 11 11111111 11112233221 1233445667778888999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeecccc-------CCChHHHHHHHHHhcc-----ccCCChHHHH
Q 002765 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK-------GVEKEHVILLAARASR-----TENQDAIDAA 382 (883)
Q Consensus 315 lvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~-------~~~~~~~l~~~~~~~~-----~~~~~~~~~a 382 (883)
.|..+-.+.-.|++|+.|||||||||+..|.|..+.-..... ..+.+.+..+|++.+. .-.+||+++|
T Consensus 466 yCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA 545 (1160)
T KOG0209|consen 466 YCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKA 545 (1160)
T ss_pred eecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHH
Confidence 999999999999999999999999999999998754211110 1122344444444331 2346999999
Q ss_pred HHHhcCChhh----------hhcCceEEEeecCCCcCccEEEEEEcCC----CcEEEEEcCChHHHHHhccCChhHHHHH
Q 002765 383 IVGMLADPKE----------ARAGVREVHFLPFNPVDKRTALTYIDSD----GNWHRASKGAPEQILALCNCREDVRKKV 448 (883)
Q Consensus 383 i~~~~~~~~~----------~~~~~~~~~~~~f~s~~k~~sv~~~~~~----g~~~~~~KGa~e~il~~~~~~~~~~~~~ 448 (883)
.++.++..-+ .....++.+.+.|+|.-|||+++..... -+++..+|||||.|-++.. +.++.+
T Consensus 546 ~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY 622 (1160)
T KOG0209|consen 546 TLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDY 622 (1160)
T ss_pred HHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhH
Confidence 9988742111 1124667788899999999998875321 3578889999999998875 456778
Q ss_pred HHHHHHHHHccCeEEEEEeeccCC--------CCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCch
Q 002765 449 HAVIDKFAERGLRSLGVARQEIPE--------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 520 (883)
Q Consensus 449 ~~~~~~~~~~G~r~l~~A~~~~~~--------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~ 520 (883)
++...+++++|.||+|++||+++. -.+++.|.+|+|.|++.|..|+|+|++++|++|++.+.+++||||||+
T Consensus 623 ~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnp 702 (1160)
T KOG0209|consen 623 DEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNP 702 (1160)
T ss_pred HHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCc
Confidence 888899999999999999999873 236789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCC--------------cc-------------------------cCcccccccCcchHHHHhh
Q 002765 521 AIGKETGRRLGMGTNMYPSS--------------SL-------------------------LGQDKDASIAALPVDELIE 561 (883)
Q Consensus 521 ~ta~~ia~~~Gi~~~~~~~~--------------~~-------------------------~~~~~~~~~~~~~~~~~~~ 561 (883)
.||.++|+++||.......- .+ +|...+.-...+.+.+++.
T Consensus 703 LTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~ 782 (1160)
T KOG0209|consen 703 LTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP 782 (1160)
T ss_pred cchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh
Confidence 99999999999965311000 00 0111110111224556667
Q ss_pred hcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecC
Q 002765 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (883)
Q Consensus 562 ~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 612 (883)
++.||||+.|.||..++..+++.|+.++|||||.||+.|||+||||||+-+
T Consensus 783 hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 783 HVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred heeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 788999999999999999999999999999999999999999999999853
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-64 Score=533.94 Aligned_cols=520 Identities=25% Similarity=0.370 Sum_probs=406.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHhc----CCCCCCchhhHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhcCC-CeEEE
Q 002765 69 FMWNPLSWVMEAAAIMAIALAN----GGGRDPDWQDFVGIIVLLVINS----TISFIEENNAGNAAAALMANLA-PKTKV 139 (883)
Q Consensus 69 ~~~~~~~~~l~~~~il~~~~~~----~~~~~~~~~~~~~i~~~i~~~~----~~~~~~e~~~~~~~~~l~~~~~-~~~~V 139 (883)
+.+||..++.++.++++.++.. .++...++.....|.+++.+.. .-+.+.|-|.+...++|++... ..++.
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 4678888877777777764321 1111123333333333333333 3344555566666667765443 35677
Q ss_pred EEC-CeEEEeecCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC---CCccccceeecceEEEE
Q 002765 140 LRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAV 215 (883)
Q Consensus 140 ~rd-g~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~~---~~v~aGt~v~~G~~~~~ 215 (883)
+++ |.++.+++.+|+.||+|.++.||.||+||.++|| ..+||||++||||.||.|.+| +.+-.||.+++...+.+
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 775 8999999999999999999999999999999999 679999999999999999998 67999999999999999
Q ss_pred EEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--cccchHhHHHHHHHHHHhhcCC
Q 002765 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV--QHRKYRDGIDNLLVLLIGGIPI 292 (883)
Q Consensus 216 V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~llv~~iP~ 292 (883)
+++...+|.+.|+..+++.++ +++|-+-.++.+..-+. ++ +++...-.|.+ +...-.-.+...++++++.+|-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT---li-FL~~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT---LI-FLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH---HH-HHHHHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 999999999999999998875 67775544443321111 11 11111112211 1111113466778999999999
Q ss_pred cchHHHHHHHHHHHHHhhccCcccccchhhhhcCCeeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhcc
Q 002765 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (883)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (883)
...--++..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|+=.-.+... .++.+.+++...+..++.
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p---~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIP---VPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheec---CCCCCHHHHHHHHHHhhh
Confidence 88877777777789999999999999999999999999999999999998766555542 457788888877776665
Q ss_pred ccCCChHHHHHHHhcCChh-hhh-cCce-EEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccCCh-hHHHHH
Q 002765 373 TENQDAIDAAIVGMLADPK-EAR-AGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKV 448 (883)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~-~~~-~~~~-~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 448 (883)
... .|-.++++..+.+.. +.+ +... ..+++||+.+.+++.+-. +++ ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 433 566666666553221 111 1111 357899998877666532 233 5678999999998776433 367788
Q ss_pred HHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHH
Q 002765 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR 528 (883)
Q Consensus 449 ~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~ 528 (883)
+...++-++.|-..++++... +++|++.++|-++|+.+|-+++||+.|||.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 889999999999999999876 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE
Q 002765 529 RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (883)
Q Consensus 529 ~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI 608 (883)
+.|.++ ..|+++||+|.++|+.-|.+|+.|+|+|||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999864 47899999999999999999999999999999999999999999
Q ss_pred EecCccHHHHhccCEEeccCCchHHHHHHHHHHHHH
Q 002765 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644 (883)
Q Consensus 609 a~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~ 644 (883)
||.+|+++|||++.+|=+|.|...+.+.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=312.07 Aligned_cols=220 Identities=36% Similarity=0.524 Sum_probs=193.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEECCeEEEeecCCCCCCcEEEEeCCCeeccceEEEe-cCCeE
Q 002765 103 GIIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLK 180 (883)
Q Consensus 103 ~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~rdg~~~~I~~~~Lv~GDiv~l~~Gd~vPaD~~ll~-g~~l~ 180 (883)
+++++++++.++++++++|+++.++++++..+++ ++|+|||++++++++||+|||+|.|++||++||||++++ | .+.
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~ 79 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-ccc
Confidence 3667888899999999999999999999988887 999999999999999999999999999999999999999 6 799
Q ss_pred EEeccccCCCcceecC-----CCCCccccceeecceEEEEEEEecchhhhhhhhhhhhcCC-CCCcHHHHHHHHHHHHHH
Q 002765 181 IDQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (883)
Q Consensus 181 Vdes~LTGEs~pv~K~-----~~~~v~aGt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~ 254 (883)
||||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+.....+ +++++++.++++..++..
T Consensus 80 vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILII 159 (230)
T ss_dssp EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHh
Confidence 9999999999999999 9999999999999999999999999999999999887765 568999999999888665
Q ss_pred HHHHHHHHHHHhhhhc--cccchHhHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhccCcccccchhhhh
Q 002765 255 SIAVGIVAEIIIMYPV--QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324 (883)
Q Consensus 255 ~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~llv~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~lE~ 324 (883)
.+++..++.+ +.++. ...+|...+..++++++++||++||+++++++..++++|+++|+++|+++++|+
T Consensus 160 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 160 IILAIAILVF-IIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHH-HHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cccccchhhh-ccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 5444333333 33333 567788899999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-25 Score=232.17 Aligned_cols=211 Identities=32% Similarity=0.412 Sum_probs=151.1
Q ss_pred eeEEEeccCCCcccCceeEeeeeeeccccCCChHHHHHHHHHhccccCCChHHHHHHHhcCChhhhhcCceEEEeecCCC
Q 002765 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (883)
Q Consensus 328 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~s 407 (883)
+++||||||||||+|++.+. . .+...++..+...+... .||+..++..+....... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v~------~---~~~~~~~~~~~~~~~~s-~~p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA------P---PSNEAALAIAAALEQGS-EHPIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE------S---CSHHHHHHHHHHHHCTS-TSHHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEEE------e---ccHHHHHHHHHHhhhcC-CCcchhhhhhhhhhccch-hhhh-----hhee
Confidence 68999999999999999991 1 34455565555444443 499999998876542211 1111 1211
Q ss_pred cCccEEEEEEcCCCcEEEEEcCChHHHHHhccCChhHHHHHHHHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEe
Q 002765 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (883)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~ 487 (883)
...++..... ++. +. |+++.+.+..... ............+|.+.+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1222221111 122 22 8888776654321 1111222233556666666664 3489999
Q ss_pred eccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002765 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (883)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (883)
+.+.|++||+++++|+.|+++|++++|+|||+..++.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred Ee--CcccH--HHHHHHHHHcCCEEEEEcCCccCHHHHhhCC
Q 002765 568 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (883)
Q Consensus 568 r~--~P~~K--~~iV~~l~~~g~~v~~iGDG~ND~~al~~Ad 605 (883)
++ +|++| .++++.+|.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-13 Score=152.82 Aligned_cols=211 Identities=18% Similarity=0.211 Sum_probs=151.6
Q ss_pred CceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-----------CCCcc-------
Q 002765 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----------PSSSL------- 542 (883)
Q Consensus 481 ~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-----------~~~~~------- 542 (883)
+-.|.|++....++|++....|+.|-++-||.+-.+-.+....+-.|.++||..... +....
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 347899999999999999999999999999999999999999999999999964211 00000
Q ss_pred cCc-----------------------cc-------ccccC-------------------------cchHHHHhhhcCeEE
Q 002765 543 LGQ-----------------------DK-------DASIA-------------------------ALPVDELIEKADGFA 567 (883)
Q Consensus 543 ~~~-----------------------~~-------~~~~~-------------------------~~~~~~~~~~~~v~a 567 (883)
.++ ++ ...++ -++++++...+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 000 00 00000 001111111234689
Q ss_pred EeCcccHHHHHHHHHHcCCEEEEEcCCcc--CHHHHhhCCeeEEecC-------------ccHH--HH------------
Q 002765 568 GVFPEHKYEIVKRLQERKHICGMTGDGVN--DAPALKKADIGIAVAD-------------ATDA--AR------------ 618 (883)
Q Consensus 568 r~~P~~K~~iV~~l~~~g~~v~~iGDG~N--D~~al~~AdvGIa~~~-------------~~~~--a~------------ 618 (883)
.++|+.-.++++.+|++|++|+++|...| .+-.+-+|||+|++.. ++.. |+
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 99999999999999999999999999998 4455679999999832 1111 11
Q ss_pred ----hccCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhccCccHHHHHHHHHhhhhh
Q 002765 619 ----SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILNDGT 691 (883)
Q Consensus 619 ----~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~l~~~~il~i~l~~~~~ 691 (883)
-++|+-+.....-++..+|+.+|.....+|+.++|.+.......+..+. .++++|..|+.-+++|...+.-.+
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~Pl 1131 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPL 1131 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHH
Confidence 1233334444455788899999999999999999999988766555444 455677778888999999887654
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-14 Score=129.44 Aligned_cols=115 Identities=26% Similarity=0.387 Sum_probs=103.6
Q ss_pred eEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002765 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (883)
Q Consensus 483 ~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (883)
...+.++---++=++++++|++|++. +++++.|||...+-...|+..|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777778889999999999999 99999999999999999999998642
Q ss_pred cCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEe-c--CccHHHHhccCEEec
Q 002765 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLT 626 (883)
Q Consensus 563 ~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~-~--~~~~~a~~aad~vl~ 626 (883)
++|+...|+.|.++++.|++.++.|.|+|||.||.+||++||+||.. + +.++.+.++||+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 37889999999999999999999999999999999999999999986 3 567778899999994
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.6e-12 Score=127.47 Aligned_cols=166 Identities=16% Similarity=0.175 Sum_probs=114.5
Q ss_pred ccCccHHHHHHHHHhhhhh-hhccccCCCCCC-----CCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 002765 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQPDS--WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 744 (883)
Q Consensus 673 ~~~l~~~~il~i~l~~~~~-~~~l~~~~~~~~-----~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 744 (883)
|.|++|+|+||+|+++|.+ ++++++|+++++ ||+++ ...++++...+..|+++++++++.|++..+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 5789999999999999998 799999998764 22222 2245677777888999999999887766541
Q ss_pred ccccccc--CCChhhHHHHHHHHHHHHHHHHhhhhccCCCC-cc-c--CchHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002765 745 AFGVRSL--RTRPDEMMAALYLQVSIISQALIFVTRSRSWS-FI-E--RPGLLLATAFVIAQLVATFIAVYAN--WSFAR 816 (883)
Q Consensus 745 ~~g~~~~--~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~-~~-~--~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 816 (883)
+|.... .....+.+|++|.++++++.++.+++|+++.. +. . ..|++++.++++++++. ++..|.+ ...++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~i~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQ-ILIVYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHH-HHHHHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHH-HHHhcchhhHhhhc
Confidence 221110 11234689999999999999999999996532 22 1 24667777777666554 4445543 23456
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 002765 817 IEGCGWGWAGVIWLYSLVTYFPLDILKFG 845 (883)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (883)
+.++++..|+++++++++.++++|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 77888888888899999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.5e-13 Score=110.76 Aligned_cols=67 Identities=37% Similarity=0.553 Sum_probs=61.5
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCc-ccccHHHHHHHHHHhHHHHHHHHHHHHH
Q 002765 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEE-KKESKVLKFLGFMWNPLSWVMEAAAIMA 85 (883)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~-~~~~~~~~~~~~~~~~~~~~l~~~~il~ 85 (883)
||.++.+++++.|+++ .+|||++||++|+++||+|++++ ++++.|+.|+++|++|++++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7899999999999976 88999999999999999999965 4688899999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.3e-10 Score=93.36 Aligned_cols=60 Identities=42% Similarity=0.703 Sum_probs=53.8
Q ss_pred HcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 002765 30 QLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALA 89 (883)
Q Consensus 30 ~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~ 89 (883)
.++++ .+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|+.++|+++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46677 4599999999999999999998875 788899999999999999999999999863
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.8e-09 Score=115.50 Aligned_cols=130 Identities=18% Similarity=0.263 Sum_probs=98.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE-EeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-GVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-r~~P 571 (883)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+.-.+..+ ..... +.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~----------v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGN----------VLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeE----------ecCccCCc
Confidence 47899999999999999999999999988888999999985311100000000 00000 000 0234
Q ss_pred ccHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 572 ~~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|||+ ++.+..++.||.++...++++++..+
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 6899888887654 3 6799999999999999999999999 88899999999999988999888765
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.2e-09 Score=106.64 Aligned_cols=131 Identities=15% Similarity=0.115 Sum_probs=96.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
+++|++.+.|+.+|+.| ++.++||-....+..+++++|+.........+.+. ...++. ....|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG~------------~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVGY------------QLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeECe------------eecCcc
Confidence 57999999999999975 99999999999999999999996321111000000 000000 013578
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~g 640 (883)
+|...++.+++.|..+.++|||.||.+|++.||+||++.....+.+.+-|+ -.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~-~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQF-PAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCC-CcccCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998655555544444 3335677888777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=107.51 Aligned_cols=153 Identities=24% Similarity=0.307 Sum_probs=105.6
Q ss_pred EeeccCCC-CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-CCCcc-c----Cccc-----------
Q 002765 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSL-L----GQDK----------- 547 (883)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-~~~~~-~----~~~~----------- 547 (883)
|.+.-.|. +.+.+.++|+++++.|+++++.||++...+..+.+++|+..... ....+ . +...
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 67899999999999999999999999999999999999864211 01000 0 0000
Q ss_pred ------------------cc-----------ccCcchHHHHhhhcC---------eEEEeCcc--cHHHHHHHHHHc---
Q 002765 548 ------------------DA-----------SIAALPVDELIEKAD---------GFAGVFPE--HKYEIVKRLQER--- 584 (883)
Q Consensus 548 ------------------~~-----------~~~~~~~~~~~~~~~---------v~ar~~P~--~K~~iV~~l~~~--- 584 (883)
.. ....+++.+.+++.. .+....|. .|..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 000011222222111 11234443 377777776554
Q ss_pred -CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHH
Q 002765 585 -KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 585 -g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
...++++||+.||.+|++.|++|+||+|+.+.+|+.||+|..+++-+++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 245999999999999999999999999999999999999999899999998885
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.2e-09 Score=106.96 Aligned_cols=144 Identities=19% Similarity=0.260 Sum_probs=100.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-CCCc-ccCc-cc-------cc-------------
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-LLGQ-DK-------DA------------- 549 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-~~~~-~~~~-~~-------~~------------- 549 (883)
++.+++.++|++|++.|+++++.||.....+..+++.+++....+ .... +... .. ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 378899999999999999999999999999999999999863211 1110 0000 00 00
Q ss_pred --------------ccCc---chHHHHhhhcCe-------EEEeC--cccHHHHHHHHHHc-C---CEEEEEcCCccCHH
Q 002765 550 --------------SIAA---LPVDELIEKADG-------FAGVF--PEHKYEIVKRLQER-K---HICGMTGDGVNDAP 599 (883)
Q Consensus 550 --------------~~~~---~~~~~~~~~~~v-------~ar~~--P~~K~~iV~~l~~~-g---~~v~~iGDG~ND~~ 599 (883)
.... +.+.+.+....+ +..++ ..+|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 111112221111 11233 34788888777653 2 35899999999999
Q ss_pred HHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHH
Q 002765 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (883)
Q Consensus 600 al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~ 636 (883)
|++.|+.|+||+++.+.+|+.||+|..+++-+++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988777777654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.4e-09 Score=110.86 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=56.6
Q ss_pred cHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+. | +.|+++|||.||.+||+.|++|+||+||.+.+|++||+|..+++-+++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566555555443 2 45999999999999999999999999999999999999999999999988885
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=3e-08 Score=106.59 Aligned_cols=154 Identities=21% Similarity=0.212 Sum_probs=107.6
Q ss_pred EeeccCCC-CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCC---------CCcc-------------
Q 002765 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP---------SSSL------------- 542 (883)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~---------~~~~------------- 542 (883)
|.+.-.|. +.+.+.++|+++++.|+++.++||.+...+..+.+++|+....+. ...+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33444444 889999999999999999999999999999999999999741110 0000
Q ss_pred --------------cCc--------c---c-------------------------ccccCcchHHHH---hhh-----cC
Q 002765 543 --------------LGQ--------D---K-------------------------DASIAALPVDEL---IEK-----AD 564 (883)
Q Consensus 543 --------------~~~--------~---~-------------------------~~~~~~~~~~~~---~~~-----~~ 564 (883)
... . . ......+...+. +.+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 0 0 000000111111 111 11
Q ss_pred eE-------EEeCc--ccHHHHHHHHHHc-CC---EEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCch
Q 002765 565 GF-------AGVFP--EHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (883)
Q Consensus 565 v~-------ar~~P--~~K~~iV~~l~~~-g~---~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~ 631 (883)
.+ ....| .+|..-++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+|+.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 12 23333 3788888777663 43 499999999999999999999999999999999999988999999
Q ss_pred HHHHHHHH
Q 002765 632 VIISAVLT 639 (883)
Q Consensus 632 ~i~~~i~~ 639 (883)
++..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998864
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.9e-08 Score=104.91 Aligned_cols=129 Identities=20% Similarity=0.264 Sum_probs=93.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE-eCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~~P 571 (883)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..-. ......... .... .+..+ ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~-~~~~~~~~~---~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAF-ANRLEVEDG---KLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-eeEEEEECC---EEEE----------EecCcccCC
Confidence 58999999999999999999999999999999999999985311 000000000 0000 00001 123
Q ss_pred ccHHHHHHHHHHcC----CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHH
Q 002765 572 EHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (883)
Q Consensus 572 ~~K~~iV~~l~~~g----~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~ 636 (883)
..|..+++.+.++. +.+.++||+.||.+|++.|+++++++ +.+..+++||+++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665442 35889999999999999999999985 567888899999999998887653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.5e-08 Score=109.51 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCE--EeccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~--vl~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.||||+||.+.+|++||. |+.+++-+++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 577777666554 2 45999999999999999999999999999999999996 777888889888884
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.3e-08 Score=107.53 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=55.0
Q ss_pred cHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccC--EEeccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad--~vl~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466656555443 2 4599999999999999999999999999999999988 7787888889888885
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.8e-08 Score=99.60 Aligned_cols=104 Identities=18% Similarity=0.230 Sum_probs=82.0
Q ss_pred HHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe--CcccHHHH
Q 002765 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEI 577 (883)
Q Consensus 500 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~--~P~~K~~i 577 (883)
.+|+.|++.|+++.++|+.+...+....+.+|+..- |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 579999999999999999999999999999998521 1111 13333334
Q ss_pred HHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHH
Q 002765 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633 (883)
Q Consensus 578 V~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i 633 (883)
++.++-....++++||+.||.+|++.|++++||+++.+.+++.|++|+.+++-.+.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 44443334579999999999999999999999999999999999999876654443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.8e-08 Score=102.20 Aligned_cols=146 Identities=22% Similarity=0.283 Sum_probs=100.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-CCCc-ccCcc---------cc-------------
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-LLGQD---------KD------------- 548 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-~~~~-~~~~~---------~~------------- 548 (883)
.+.+.+.++|+++++.|+++++.||.+...+..+.+++|+....+ .... +.... ..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 367889999999999999999999999999999999999643211 0000 00000 00
Q ss_pred ----------c---------ccCcchHHHHhhhcC---------eEEEeCc--ccHHHHHHHHHHc-C---CEEEEEcCC
Q 002765 549 ----------A---------SIAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDG 594 (883)
Q Consensus 549 ----------~---------~~~~~~~~~~~~~~~---------v~ar~~P--~~K~~iV~~l~~~-g---~~v~~iGDG 594 (883)
. ..+.+...+..+... .+..+.| ..|..-++.+.+. | ..++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 000011111221111 1223334 4788888777653 3 569999999
Q ss_pred ccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchH----HHHHHH
Q 002765 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 638 (883)
Q Consensus 595 ~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~----i~~~i~ 638 (883)
.||.+|++.|++|+||+|+.+.+|+.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 665553
|
catalyze the same reaction as SPP. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-08 Score=90.30 Aligned_cols=65 Identities=31% Similarity=0.448 Sum_probs=54.2
Q ss_pred CCChHHHHHHHhcCC------hhhhhcCceEEEeecCCCcCccEEEEEEcCCCcEEEEEcCChHHHHHhccC
Q 002765 375 NQDAIDAAIVGMLAD------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC 440 (883)
Q Consensus 375 ~~~~~~~ai~~~~~~------~~~~~~~~~~~~~~~f~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 440 (883)
.++|.|.|++.++.. ....+..+++++.+||+|.+|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 458999999887642 3456788999999999999999999998 3345677999999999999973
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.3e-08 Score=94.46 Aligned_cols=105 Identities=26% Similarity=0.355 Sum_probs=82.3
Q ss_pred HHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHH
Q 002765 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (883)
Q Consensus 501 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~ 580 (883)
+|++|++.|+++.++||+....+..+.+++|+... |.. ...|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~--~~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQG--QSNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eec--ccchHHHHHH
Confidence 99999999999999999999999999999998531 111 1235555544
Q ss_pred HHH----cCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchH-HHHHH
Q 002765 581 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 637 (883)
Q Consensus 581 l~~----~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~-i~~~i 637 (883)
+.+ ..+.++|+||+.||.+|++.|++++++.++.+..+..||+++..+.-.+ +.+++
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 432 2467999999999999999999999999988999999999997665333 44433
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.7e-08 Score=103.61 Aligned_cols=146 Identities=18% Similarity=0.210 Sum_probs=101.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCC-CCCccc---------------------------
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL--------------------------- 543 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~-~~~~~~--------------------------- 543 (883)
..+.+++.+++++++++|+++++.||+....+..+.+++++....+ ..+.+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4467899999999999999999999999999999999999863111 000000
Q ss_pred ---------------Ccc--cc------------------------------cccCcchHHH-------HhhhcCe----
Q 002765 544 ---------------GQD--KD------------------------------ASIAALPVDE-------LIEKADG---- 565 (883)
Q Consensus 544 ---------------~~~--~~------------------------------~~~~~~~~~~-------~~~~~~v---- 565 (883)
... .. ...+.+.+++ .......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 00 0000111111 1111101
Q ss_pred ---EEEeCc--ccHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHH
Q 002765 566 ---FAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (883)
Q Consensus 566 ---~ar~~P--~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~ 636 (883)
+-.++| ..|..-++.+.+. .+.++++||+.||.+||+.|+.|+||+++++..++.||.++...+-.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 223444 5788888877653 3579999999999999999999999999999999999999988777888776
Q ss_pred H
Q 002765 637 V 637 (883)
Q Consensus 637 i 637 (883)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.2e-07 Score=110.92 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=49.5
Q ss_pred EEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHH
Q 002765 587 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 587 ~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
.|+++|||.||.+||+.|+.||||+||.+.+|++||+|..+++-+++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5899999999999999999999999999999999999999999999998885
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.7e-07 Score=101.15 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=55.8
Q ss_pred cHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+. | +.++++||+.||.+|++.|++|++|+++.+..|+.||+++.+++-+++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466555544332 3 45999999999999999999999999999999999999999999999998885
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.5e-07 Score=96.87 Aligned_cols=119 Identities=19% Similarity=0.195 Sum_probs=85.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE-eC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~~ 570 (883)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++....+.-....+ ..++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEec----------eeeeeecC
Confidence 678999999999999999999999999999999999999997532111100000 0000 12333 44
Q ss_pred cccHHHHHHHHHHc-CC---EEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEe
Q 002765 571 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 625 (883)
Q Consensus 571 P~~K~~iV~~l~~~-g~---~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl 625 (883)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.++++...... +..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l-~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKL-RALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHH-HHHHHHhc
Confidence 57899888666553 54 499999999999999999999999854443 33444433
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.1e-07 Score=91.88 Aligned_cols=98 Identities=26% Similarity=0.329 Sum_probs=79.2
Q ss_pred HHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHH
Q 002765 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (883)
Q Consensus 500 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~ 579 (883)
.+|+.|++.|+++.++||.....+..+++++|+... |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 689999999999999999999999999999998521 11 1234555554
Q ss_pred HH-HHcC---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCC
Q 002765 580 RL-QERK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (883)
Q Consensus 580 ~l-~~~g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~ 629 (883)
.+ ++.| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++..++
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCC
Confidence 44 3333 56999999999999999999999999888888999999996544
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.52 E-value=1e-06 Score=94.18 Aligned_cols=67 Identities=19% Similarity=0.202 Sum_probs=53.8
Q ss_pred cHHHHHHHHHHc------CCEEEEEcCCccCHHHHhhCCeeEEecCcc---HHHHhc--c-CEEeccCCchHHHHHHHH
Q 002765 573 HKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 573 ~K~~iV~~l~~~------g~~v~~iGDG~ND~~al~~AdvGIa~~~~~---~~a~~a--a-d~vl~~~~~~~i~~~i~~ 639 (883)
.|..-++.+.+. ...++++||+.||.+|++.|+.||||+|+. +..|+. | ++|..+++-+++.+++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 566555555432 456999999999999999999999999987 468876 4 588888899999988853
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.8e-07 Score=91.65 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=90.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++++.++.|+++ +++.++|+.....+..+.+++|+.... . ..+...+.. .... .....|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~~-~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-C-HSLEVDEDG-MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-c-ceEEECCCC-eEEC------------ccccccc
Confidence 4689999999999999 999999999999999999999985311 0 000000000 0000 0012378
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCE-EeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~-vl~~~~~~~i~~~i 637 (883)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+...+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 898999999888899999999999999999999999887544444445565 43 4556555444
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.9e-07 Score=96.69 Aligned_cols=64 Identities=25% Similarity=0.287 Sum_probs=55.3
Q ss_pred cHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCchHHHHH
Q 002765 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (883)
Q Consensus 573 ~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~ 636 (883)
.|..-++.+.+. .+.++++||+.||.+|++.|+.|++|+++++.+|+.||+++.+++-+++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 577777777654 2469999999999999999999999999999999999999988888887654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.3e-05 Score=86.83 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=75.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
|++|++.+.++++++.|+++.++|+-+...+..+++++|+.+. +.+.+. ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111110 1135577
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 618 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~ 618 (883)
.|.+.++..... +.+.++||+.||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 776655432222 225789999999999999999999986655444
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.44 E-value=1e-06 Score=90.40 Aligned_cols=117 Identities=26% Similarity=0.370 Sum_probs=83.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... +.. .+...+ ..... -..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~-~~~~~~-~g~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSN-ELVFDE-KGFIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEE-EEEEcC-CCeEe----------cceeeEEccc
Confidence 5799999999999999999999999999999999999997531 100 010000 00000 0012234567
Q ss_pred cHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccC
Q 002765 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (883)
Q Consensus 573 ~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad 622 (883)
.|.+.++.+.+. .+.+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788777766543 34599999999999999999999999865555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.7e-07 Score=83.96 Aligned_cols=114 Identities=23% Similarity=0.364 Sum_probs=88.7
Q ss_pred HHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHH
Q 002765 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (883)
Q Consensus 500 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~ 579 (883)
-.|+.+.++||++.++||.+......-|+++||..- | .--++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------------------------------~--qG~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------------------------------Y--QGISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------------------------------e--echHhHHHHHH
Confidence 468999999999999999999999999999999521 1 11356766665
Q ss_pred HHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccCEEeccCCch----HHHHHHHHHHHHHH
Q 002765 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS----VIISAVLTSRAIFQ 645 (883)
Q Consensus 580 ~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad~vl~~~~~~----~i~~~i~~gR~~~~ 645 (883)
.|.++ -+.|+++||..||.|+|++.++++|+.++.+..++.||+|+....-. .+.+.|..++..++
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 55543 35699999999999999999999999999999999999999866533 33444444444443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.1e-06 Score=92.61 Aligned_cols=68 Identities=21% Similarity=0.156 Sum_probs=52.9
Q ss_pred ccHHHHHHHHHH-------cCCEEEEEcCCccCHHHHhhCCeeEEecCcc-HH-----HHhccCEEeccCCchHHHHHHH
Q 002765 572 EHKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 572 ~~K~~iV~~l~~-------~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~-~~-----a~~aad~vl~~~~~~~i~~~i~ 638 (883)
.+|..-++.+.+ ....|+++|||.||.+||+.|++||||+++. +. .+..+|++....+-+++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 356665555543 3457999999999999999999999999544 21 3457999999999899998886
Q ss_pred H
Q 002765 639 T 639 (883)
Q Consensus 639 ~ 639 (883)
+
T Consensus 266 ~ 266 (271)
T PRK03669 266 H 266 (271)
T ss_pred H
Confidence 3
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.1e-06 Score=87.94 Aligned_cols=136 Identities=13% Similarity=0.049 Sum_probs=87.3
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcc-cCcccccccCcchHHHHhhhcCeE--EE
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL-LGQDKDASIAALPVDELIEKADGF--AG 568 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~--ar 568 (883)
.+++|++.+.++.|++.|+++.++||........+.+.++........... .++....... .-..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p---------~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWP---------HPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCC---------CCCcccccc
Confidence 468999999999999999999999999998888888887543222111111 1111000000 00000 00
Q ss_pred eCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhc--cCEEeccCCchHHHHHHH
Q 002765 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA--SDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 569 ~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~a--ad~vl~~~~~~~i~~~i~ 638 (883)
.....|..+++.++...+.+.|+|||.||.+|++.||+.++-+.-.+-.++. +.+.. ++|..+...++
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1135799999999888888999999999999999999988755222212211 22222 56777776653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.8e-06 Score=89.89 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=53.8
Q ss_pred cHHHHHHHHHH----cC-CEEEEEcCCccCHHHHhhCCeeEEecCccHHHH----hcc-CEEe--ccCCchHHHHHHH
Q 002765 573 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iV~~l~~----~g-~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~----~aa-d~vl--~~~~~~~i~~~i~ 638 (883)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.+| .+| +.+. ..++-+++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 66666665553 34 789999999999999999999999999999999 666 6777 5666788888775
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.5e-06 Score=88.27 Aligned_cols=92 Identities=24% Similarity=0.285 Sum_probs=70.9
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc-c-
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE-H- 573 (883)
Q Consensus 496 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~-~- 573 (883)
+++.+.|+.++++|++++++||+....+..+++.+|++...+ .+.+.. .. .+.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v-----~~~~~~-~~---------~~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV-----IGNELF-DN---------GGGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE-----EEEEEE-CT---------TCCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE-----EEEeee-ec---------ccceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211 111110 00 012246666666 5
Q ss_pred -HHHHHHHH------HHcCCEEEEEcCCccCHHHHh
Q 002765 574 -KYEIVKRL------QERKHICGMTGDGVNDAPALK 602 (883)
Q Consensus 574 -K~~iV~~l------~~~g~~v~~iGDG~ND~~al~ 602 (883)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999996
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.2e-05 Score=82.10 Aligned_cols=131 Identities=20% Similarity=0.288 Sum_probs=83.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +..........+- ...... .... ...+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~------~~~~--~~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFD------ENEP--TSRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECcc------CCCc--ccCC
Confidence 378999999999999999999999999999999999999863 1111000000000 000000 0000 0112
Q ss_pred ccHHHHHHHHHHc--CCEEEEEcCCccCHHHHhh--CCeeEEecCc--cHHHHhccCEEeccCCchHHHH
Q 002765 572 EHKYEIVKRLQER--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 635 (883)
Q Consensus 572 ~~K~~iV~~l~~~--g~~v~~iGDG~ND~~al~~--AdvGIa~~~~--~~~a~~aad~vl~~~~~~~i~~ 635 (883)
..|.+.++.+.+. ...++|+||+.||..|.+. ++++++.+.. .+.....+|+++ +++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 4577777776654 3568999999999999877 5666666532 233455689988 45555544
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.14 E-value=5.6e-06 Score=80.41 Aligned_cols=109 Identities=20% Similarity=0.199 Sum_probs=75.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCccc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 573 (883)
+-|++++.++.||+.|.+|.++||--...+..+|.++||+...+..+.+. ...+++-.. . +. --.-+....
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~-----fd~~Gk~~g-f--d~-~~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELL-----FDKDGKYLG-F--DT-NEPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheee-----eccCCcccc-c--cc-CCccccCCc
Confidence 46899999999999999999999999999999999999975322111110 000000000 0 00 000112357
Q ss_pred HHHHHHHHHHc--CCEEEEEcCCccCHHHHhhCCeeEEec
Q 002765 574 KYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 611 (883)
Q Consensus 574 K~~iV~~l~~~--g~~v~~iGDG~ND~~al~~AdvGIa~~ 611 (883)
|.++++.++++ -..++|+|||.||.+|+..||.=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999885 357999999999999999876655554
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.9e-05 Score=82.30 Aligned_cols=134 Identities=13% Similarity=0.070 Sum_probs=84.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCC--CCcccCcccccccCcchHHHHhhhcCe-EEEe
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADG-FAGV 569 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v-~ar~ 569 (883)
+++|++.+.++.|++.|+++.++||-....+..+.++. +....+. .....+.......... ... +...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p--------~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP--------CDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC--------cccccccc
Confidence 57999999999999999999999999999899988887 6431110 0001111000000000 000 0000
Q ss_pred CcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEecCccHHHHh--ccCEEeccCCchHHHHHH
Q 002765 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARS--ASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 570 ~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~--aad~vl~~~~~~~i~~~i 637 (883)
....|..+++.++.....+.|+|||.||.+|.+.||+.++-+.-.+.+++ .+.+.+ ++|..+...+
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 01348889998887777899999999999999999997773311122222 233333 5677766655
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.1e-05 Score=79.55 Aligned_cols=114 Identities=16% Similarity=0.082 Sum_probs=76.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE-eC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~~ 570 (883)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+.... ..+.+.+....- ...+.....++..+.. ..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF---IEIYSNPASFDN-DGRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe---eEEeccCceECC-CCcEEEecCCCCccCcCCC
Confidence 368999999999999999999999999999999999999885321 011111110000 0000000000111111 12
Q ss_pred cccHHHHHHHHHHc-CCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 571 PEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 571 P~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
...|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 23599999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.3e-05 Score=80.40 Aligned_cols=100 Identities=24% Similarity=0.262 Sum_probs=69.6
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCccc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 573 (883)
++|++.+.++.+++.|+++.++||.....+..+++.+|+..-. .. .+...+ +....... ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~-~~-~~~~~~-~g~~~g~~--------~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVF-AN-RLEFDD-NGLLTGPI--------EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchhe-ee-eEEECC-CCEEeCcc--------CCcccCCcch
Confidence 6899999999999999999999999999999999999986311 00 000000 00000000 0001245688
Q ss_pred HHHHHHHHHHc----CCEEEEEcCCccCHHHHhhC
Q 002765 574 KYEIVKRLQER----KHICGMTGDGVNDAPALKKA 604 (883)
Q Consensus 574 K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~A 604 (883)
|...++.+++. ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999887654 34689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.90 E-value=4.8e-05 Score=80.98 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=97.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCC--C-CCCc-cc-Cc---------------------
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y-PSSS-LL-GQ--------------------- 545 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~--~-~~~~-~~-~~--------------------- 545 (883)
.+..|...++++++++.|+.++..||......+.+.+++++..+. + .... +. .+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456688999999999999999999999999999999989875431 1 1110 00 00
Q ss_pred -------------c-ccc-------ccCcch----H---HHHhhhc--Ce---E-----EEeCc--ccHHHHHHHHHHc-
Q 002765 546 -------------D-KDA-------SIAALP----V---DELIEKA--DG---F-----AGVFP--EHKYEIVKRLQER- 584 (883)
Q Consensus 546 -------------~-~~~-------~~~~~~----~---~~~~~~~--~v---~-----ar~~P--~~K~~iV~~l~~~- 584 (883)
. ... ....+. + .+.+... .+ + -.+.| ..|..-++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 000 000001 1 1111111 11 1 13344 4788888887654
Q ss_pred ---CCEEEEEcCCccCHHHHhh-CCeeEEecCccHHHHhccC-------EEeccCCchHHHHHHH
Q 002765 585 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (883)
Q Consensus 585 ---g~~v~~iGDG~ND~~al~~-AdvGIa~~~~~~~a~~aad-------~vl~~~~~~~i~~~i~ 638 (883)
...|+++||+.||.+|++. ++.|++|+|+.+..|+.++ ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 6799999999998887543 5555556677877774
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.3e-05 Score=79.26 Aligned_cols=110 Identities=15% Similarity=0.096 Sum_probs=76.9
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
..+++|++.+.++.+++.|++++++||.....+..+++.+|+..-. ........+ ....++.. --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~-~~~l~~~~~--g~~~g~~~---------~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAI-GTRLEESED--GIYTGNID---------GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceE-ecceEEcCC--CEEeCCcc---------CCCCC
Confidence 3468999999999999999999999999999999999999985321 110000000 00000000 01234
Q ss_pred cccHHHHHHHHHH-cC---CEEEEEcCCccCHHHHhhCCeeEEecC
Q 002765 571 PEHKYEIVKRLQE-RK---HICGMTGDGVNDAPALKKADIGIAVAD 612 (883)
Q Consensus 571 P~~K~~iV~~l~~-~g---~~v~~iGDG~ND~~al~~AdvGIa~~~ 612 (883)
++.|...++.+.+ .+ +.+.++||+.||.||++.|+.++++..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 6788887776544 33 368899999999999999999998863
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=6.8e-05 Score=78.34 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=87.3
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC-
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF- 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~- 570 (883)
.++.|++.+.++.|++.|+++.++||........+.+..|+.... . .+.+.+. +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-S--VVIGGDS------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-c--EEEcCCC------------------CCCCCc
Confidence 457899999999999999999999999999999999999985321 0 1111000 01111
Q ss_pred -cccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEecC----ccHHHHhccCEEeccCCchHHHHHHHH
Q 002765 571 -PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 571 -P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
|+--..+.+.++.....++++||+.||..+.+.|++ +|.+.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 222233444444445679999999999999999999 666542 2344456788888 778888877754
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.84 E-value=8.1e-05 Score=77.61 Aligned_cols=126 Identities=18% Similarity=0.208 Sum_probs=91.1
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
...+-|+++++++.|+++|++..++|++....+..+.+..|+.... ..+.+.+.. -..+-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCC----------------CCCCcC
Confidence 3467799999999999999999999999999999999999986431 111110000 011123
Q ss_pred cccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCC---eeEEecC--ccHHHHhccCEEeccCCchHHHHHH
Q 002765 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 571 P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Ad---vGIa~~~--~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
|+......+.+....+.++||||..+|..|=++|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55555566666555457999999999999999998 6666663 4556777799999 6677766554
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.71 E-value=7.4e-05 Score=70.59 Aligned_cols=118 Identities=15% Similarity=0.066 Sum_probs=74.5
Q ss_pred ccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
.-..++++++.+.+++|++.|++++++||.....+....++.|+.... ...+...... ................+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAA-IYYPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhh-hhcccccccccccccccCC
Confidence 345688999999999999999999999999999999999999874210 0011000000 0000000000000112234
Q ss_pred eCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhh-CCeeEE
Q 002765 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK-ADIGIA 609 (883)
Q Consensus 569 ~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~-AdvGIa 609 (883)
-.|+.+..+.+.+....+.+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 44555666666666556789999999999999998 444544
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00014 Score=74.98 Aligned_cols=124 Identities=16% Similarity=0.143 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|++.|+++.++||.....+...-+..|+.... ...+...+. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999988888888888885310 000000000 00111222
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE-e--c--CccHHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa-~--~--~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
-=..+.+.++-..+.++|+||+.+|..+-++|++... + | +..+..++.+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2233334444345679999999999999999998543 3 3 23345567899988 5666665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0002 Score=74.80 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=38.9
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~ 534 (883)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45556679999999999999999999999999999999999843
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00043 Score=78.84 Aligned_cols=71 Identities=25% Similarity=0.272 Sum_probs=54.3
Q ss_pred EeCcc--cHHHHHHHHHHc-------CCEEEEEcCCccCHHHHhhCC-eeEEecCccHHHHhcc--------CEEec-cC
Q 002765 568 GVFPE--HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EP 628 (883)
Q Consensus 568 r~~P~--~K~~iV~~l~~~-------g~~v~~iGDG~ND~~al~~Ad-vGIa~~~~~~~a~~aa--------d~vl~-~~ 628 (883)
.+.|. .|..-++.+.+. ...++++||+.||.+||+.|+ .||+|+|+.+..|+.+ +++.. +.
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 45554 588888877654 247899999999999999999 6999999999888743 55544 34
Q ss_pred CchHHHHHHH
Q 002765 629 GLSVIISAVL 638 (883)
Q Consensus 629 ~~~~i~~~i~ 638 (883)
+-++|.++++
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 5667777774
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00011 Score=77.58 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=57.9
Q ss_pred ccHHHHHHHHHHc-C---CEEEEEcCCccCHHHHhhCCeeEEecCccHHHHhccC----EEeccCCchHHHHHHHH
Q 002765 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVLT 639 (883)
Q Consensus 572 ~~K~~iV~~l~~~-g---~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~a~~aad----~vl~~~~~~~i~~~i~~ 639 (883)
..|...++.+.++ | ..++++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++-.++.++|++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 4788888877654 3 3588999999999999999999999999999999999 77777777888888853
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.001 Score=71.43 Aligned_cols=139 Identities=12% Similarity=0.124 Sum_probs=84.3
Q ss_pred CCCCChHHHHHHHHh-CCCeEEEEcCCchHHHHHHHHHhCCC--C-C---CC--CCC----ccc----------------
Q 002765 493 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-N---MY--PSS----SLL---------------- 543 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~-aGi~v~mlTGD~~~ta~~ia~~~Gi~--~-~---~~--~~~----~~~---------------- 543 (883)
.+-+++.++|++|++ .|++++++||++......+.+.+++. . + .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999888887766642 1 0 00 000 000
Q ss_pred ---Ccccc----------cccC--cchHHHHh----hhcC--------eEEEeCc--ccHHHHHHHHHHc----CCEEEE
Q 002765 544 ---GQDKD----------ASIA--ALPVDELI----EKAD--------GFAGVFP--EHKYEIVKRLQER----KHICGM 590 (883)
Q Consensus 544 ---~~~~~----------~~~~--~~~~~~~~----~~~~--------v~ar~~P--~~K~~iV~~l~~~----g~~v~~ 590 (883)
+...+ .... .+.+.++. +... -+..+.| .+|..-++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000 0000 01111111 1111 1223334 3788877765543 357899
Q ss_pred EcCCccCHHHHhhC----CeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 591 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 591 iGDG~ND~~al~~A----dvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+||+.||.+|++.+ +.||+||++. ..|++.|. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999875 35778774 445554444
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00078 Score=70.24 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=35.5
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCC
Q 002765 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 496 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~ 533 (883)
+.+.++|++++++|++++++||.....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44889999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00069 Score=73.01 Aligned_cols=125 Identities=16% Similarity=0.162 Sum_probs=79.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
.++.|++.++++.|++.|+++.++||.....+..+.++.|+.... ..+.+.+.. -..+-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f---~~i~~~d~~----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF---RWIIGGDTL----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC---eEEEecCCC----------------CCCCCCc
Confidence 467899999999999999999999999988888888888874311 001000000 0000111
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEecC----ccHHHHhccCEEeccCCchHHHHHH
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 572 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+-=..+.+.+.-..+.++|+||+.||..+.++|++ .+++.. ..+..+..+|.++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11122333333234679999999999999999997 344432 2233445789888 5666666543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00059 Score=70.76 Aligned_cols=124 Identities=18% Similarity=0.134 Sum_probs=81.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.... ..+.+.+.. -..+-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF---DVVITLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce---eEEEecCcC----------------CCCCCCcH
Confidence 36799999999999999999999999999999888999985311 001110000 00111233
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE---EecC-c-cHHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI---AVAD-A-TDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI---a~~~-~-~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
--.++.+.++-....++|+||+.+|..|-++|++-. .-+. . .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 223344444434467899999999999999999843 2232 1 223345688887 5677776654
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00062 Score=70.40 Aligned_cols=121 Identities=15% Similarity=0.143 Sum_probs=77.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|++.|+++.++|+.....+..+.++.|+.... + .+.+.+.. -..+-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~~----------------~~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-S--VLIGGDSL----------------AQRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-c--EEEecCCC----------------CCCCCChH
Confidence 57899999999999999999999999998999999999985321 0 11111000 00011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE-e--cCc--cHHHHhccCEEeccCCchHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVII 634 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa-~--~~~--~~~a~~aad~vl~~~~~~~i~ 634 (883)
-=....+.+.-....++|+||+.||..+.++|++-.. + |.+ .+.....+|+++ +++..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 1122333333334669999999999999999998654 3 321 123334688887 4555544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0011 Score=69.30 Aligned_cols=119 Identities=14% Similarity=0.154 Sum_probs=76.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
-++.|++.++++.|++.|+++.++|+........+.++.|+..... ..+.+... -..+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEcccC-----------------CCCCCCH
Confidence 3578999999999999999999999999998999999999854210 01100000 0011112
Q ss_pred ccHHHHHHHHHHcC---CEEEEEcCCccCHHHHhhCCeeEEe-cC---ccHHHHhccCEEeccCCchHHH
Q 002765 572 EHKYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV-AD---ATDAARSASDIVLTEPGLSVII 634 (883)
Q Consensus 572 ~~K~~iV~~l~~~g---~~v~~iGDG~ND~~al~~AdvGIa~-~~---~~~~a~~aad~vl~~~~~~~i~ 634 (883)
+ -+.+.+++.| +.++|+||..||+.+-++|++.... .. ..+.-...+|+++ .++..+.
T Consensus 152 ~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 E---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred H---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 2 2233344333 5689999999999999999986544 22 2222233577776 4555543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0037 Score=66.49 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=38.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~ 534 (883)
+..-+.+.++|++|+++||.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3455679999999999999999999999999999999999864
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0064 Score=64.76 Aligned_cols=137 Identities=10% Similarity=0.068 Sum_probs=83.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..... .+..+......++. +... . .+ -+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f~~dGv-ltG~-~-~P---~i~~ 190 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDFDEDGV-LKGF-K-GP---LIHT 190 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEECCCCe-EeCC-C-CC---cccc
Confidence 4679999999999999999999999999999999999999853211 11111000000000 0000 0 00 0111
Q ss_pred ccHHHHHHH-----HH--HcCCEEEEEcCCccCHHHHhhC---CeeEEec--Cc-----cHHHHhccCEEeccCCchHHH
Q 002765 572 EHKYEIVKR-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARSASDIVLTEPGLSVII 634 (883)
Q Consensus 572 ~~K~~iV~~-----l~--~~g~~v~~iGDG~ND~~al~~A---dvGIa~~--~~-----~~~a~~aad~vl~~~~~~~i~ 634 (883)
..|.+.+.. ++ .....|.++|||.||.+|..-. +--+.+| +. -+.=+++=|+||.+|.=-.++
T Consensus 191 ~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~ 270 (277)
T TIGR01544 191 FNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVA 270 (277)
T ss_pred cccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHH
Confidence 456654432 22 2246789999999999996543 2223333 22 223456889999998766666
Q ss_pred HHH
Q 002765 635 SAV 637 (883)
Q Consensus 635 ~~i 637 (883)
.+|
T Consensus 271 ~~i 273 (277)
T TIGR01544 271 NSI 273 (277)
T ss_pred HHH
Confidence 655
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0027 Score=65.99 Aligned_cols=124 Identities=17% Similarity=0.163 Sum_probs=78.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
.++.||+.+.++.|++.|+++.++|+-.......+.+..|+.. +..+ ..+...+.. ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCCcCC-----------------CCCCC
Confidence 4789999999999999999999999999999999999999851 1111 111111000 00111
Q ss_pred cccHHHHHHHHHHc-CCEEEEEcCCccCHHHHhhCCeeE--EecCcc----HHHHhccCEEeccCCchHHHH
Q 002765 571 PEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGI--AVADAT----DAARSASDIVLTEPGLSVIIS 635 (883)
Q Consensus 571 P~~K~~iV~~l~~~-g~~v~~iGDG~ND~~al~~AdvGI--a~~~~~----~~a~~aad~vl~~~~~~~i~~ 635 (883)
|+-=....+.+.-. ...++|+||+.+|..+-++|++.. ++..|. +.....+|.++ +++..+..
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 22112222333222 357999999999999999999986 332321 12234577777 45555544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0032 Score=67.10 Aligned_cols=94 Identities=17% Similarity=0.098 Sum_probs=64.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|++.|+++.++|+.....+..+-++.|+..... ...+.+.+.. ..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 467999999999999999999999999999988888888754210 1111111000 0111222
Q ss_pred cHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCee
Q 002765 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 573 ~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvG 607 (883)
.+.+.+++. .+.++|+||..+|..+-+.|++-
T Consensus 161 ---~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 ---MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred ---HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 333444433 34599999999999999999974
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0036 Score=64.81 Aligned_cols=108 Identities=13% Similarity=0.035 Sum_probs=75.5
Q ss_pred CCCCChHHHH-HHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+.. ...+.+.+.+...++.- .-..|..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~~---------~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGWV---------LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccEE---------CCccCCC
Confidence 4589999999 57889999999999999999999999999621 01111211111000000 0123567
Q ss_pred ccHHHHHHHH-HHcCCEEEEEcCCccCHHHHhhCCeeEEecCc
Q 002765 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVADA 613 (883)
Q Consensus 572 ~~K~~iV~~l-~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~~ 613 (883)
++|.+-++.. ........+-||+.||.|||+.|+-+++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 8898877654 33345567899999999999999999999743
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.003 Score=66.32 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=80.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..+.+.+.. -..+-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC----------------CCCCCCHH
Confidence 57899999999999999999999999988888888888875321 011111000 00111232
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE-Ee--cC--cc-HHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--AD--AT-DAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI-a~--~~--~~-~~a~~aad~vl~~~~~~~i~~~i 637 (883)
-=..+.+.+.-....++|+||+.||..|-+.|++.. ++ |. .. ......+|+++ +++..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 223444555544577999999999999999999863 33 22 11 12234689988 5566555433
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0073 Score=65.03 Aligned_cols=118 Identities=12% Similarity=0.105 Sum_probs=79.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.... . ..+.+ ...+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~-----------------------~~~~~ 196 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAG-----------------------TPILS 196 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEec-----------------------CCCCC
Confidence 46799999999999999999999999999999999999985321 0 00000 00011
Q ss_pred cHHHHHHHHHH---cCCEEEEEcCCccCHHHHhhCCeeEE-ecCc--c--HHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIA-VADA--T--DAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~---~g~~v~~iGDG~ND~~al~~AdvGIa-~~~~--~--~~a~~aad~vl~~~~~~~i~~~i 637 (883)
.+.-+.+.+++ ....++|+||+.+|..+-++|++-.. +..| + +.....+|+++ +++..+...+
T Consensus 197 k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 197 KRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 12222233333 34569999999999999999998533 3222 2 23344689988 6677776654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0027 Score=65.61 Aligned_cols=107 Identities=12% Similarity=0.034 Sum_probs=74.3
Q ss_pred CCCCChHHHHH-HHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~-~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+... ..+.+.+.+.. ++.. + .=..|..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~gg~----~----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NGGW----V----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CCce----E----cCccCCC
Confidence 46899999996 78989999999999999999999998665221 01112211110 0000 0 1123567
Q ss_pred ccHHHHHHHH-HHcCCEEEEEcCCccCHHHHhhCCeeEEecC
Q 002765 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (883)
Q Consensus 572 ~~K~~iV~~l-~~~g~~v~~iGDG~ND~~al~~AdvGIa~~~ 612 (883)
++|.+-++.. ........+-||+.||.|||+.||-+++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8898877644 3233456789999999999999999999974
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0043 Score=73.17 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=39.5
Q ss_pred EeeccCCC-CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCC
Q 002765 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~ 533 (883)
|.+.-.|. .-+.+.++|++++++|+.+++.||........+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44444333 3357899999999999999999999999999999999974
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.007 Score=60.57 Aligned_cols=142 Identities=18% Similarity=0.201 Sum_probs=92.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCc-----cc-----------ccccCcchHH
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ-----DK-----------DASIAALPVD 557 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~-----~~-----------~~~~~~~~~~ 557 (883)
+-||+.++.+.+++. ...+++|---...+.++|..+|++........+.-+ +. .+..+.+++-
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 458999999988765 456667777778899999999996422111111000 00 0112222221
Q ss_pred HHhhhcCeEEEeCccc---------------HHHHHHHHHHc---CCEEEEEcCCccCHHHHhhCCe--eEEec-CccHH
Q 002765 558 ELIEKADGFAGVFPEH---------------KYEIVKRLQER---KHICGMTGDGVNDAPALKKADI--GIAVA-DATDA 616 (883)
Q Consensus 558 ~~~~~~~v~ar~~P~~---------------K~~iV~~l~~~---g~~v~~iGDG~ND~~al~~Adv--GIa~~-~~~~~ 616 (883)
+.+. .+|.|..|.+ |+++++.+.+. ....+++||++.|+.||+.+.= |+|+. ||.+-
T Consensus 163 e~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 163 EKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 1111 2577777754 44455444432 3447899999999999998853 48887 88899
Q ss_pred HHhccCEEeccCCchHHHHHHH
Q 002765 617 ARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 617 a~~aad~vl~~~~~~~i~~~i~ 638 (883)
|...||+.+..++..+....|+
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 9889999999998888777774
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0063 Score=65.43 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=62.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..... ..+.+.+. ....-|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~--d~i~~~~~------------------~~~~KP- 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP--DHVVTTDD------------------VPAGRP- 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc--eEEEcCCc------------------CCCCCC-
Confidence 467999999999999999999999999888877777777643110 11111100 000112
Q ss_pred cHHHHHHHHHHcC----CEEEEEcCCccCHHHHhhCCe
Q 002765 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADI 606 (883)
Q Consensus 573 ~K~~iV~~l~~~g----~~v~~iGDG~ND~~al~~Adv 606 (883)
+..-+.+.+++.| ..++|+||+.+|..+-+.|++
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 1123334444432 569999999999999999997
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0069 Score=64.72 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=76.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.... ...+.+.+.. ..+-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999998889985311 1111111000 0111122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE-Ee-cCccHHHHhccCEEeccCCchHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVI 633 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI-a~-~~~~~~a~~aad~vl~~~~~~~i 633 (883)
-=....+.+.-....++|+||..+|..|-++|++-. ++ +.........+|+++ ++++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 122333334334466999999999999999999843 33 222222233578876 444444
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0052 Score=63.11 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhC
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~G 531 (883)
++.+++.+++++|++.|++++++||........+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999998888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0077 Score=64.01 Aligned_cols=116 Identities=12% Similarity=0.135 Sum_probs=76.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|++.|+++.++|+-....+...-+..|+.... ...+.+.+.. ..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999985321 1111111100 0111233
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE-ecCc---cHHHHhccCEEecc
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA---TDAARSASDIVLTE 627 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~~---~~~a~~aad~vl~~ 627 (883)
--....+.++-....++|+||..+|..+=++|++-.. +..| .+.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 2233444444445679999999999999999998433 3222 22223468888844
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0025 Score=65.12 Aligned_cols=94 Identities=18% Similarity=0.096 Sum_probs=65.7
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
.+++.+++.++++.|++.|+++.++||.....+..+-+..|+.... ...+...+ +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 4557788899999999999999999999999999999999985321 11111000 111233
Q ss_pred cccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhC
Q 002765 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (883)
Q Consensus 571 P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~A 604 (883)
|+--....+.+.-....++|+||+.+|+.+-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4443445555555556799999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.022 Score=70.21 Aligned_cols=60 Identities=20% Similarity=0.217 Sum_probs=46.4
Q ss_pred ccHHHHHHHHHHc--CCEEEEEcCCccCHHHHhhC---CeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 572 EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 572 ~~K~~iV~~l~~~--g~~v~~iGDG~ND~~al~~A---dvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
-+|...++.+.+. ...++++||+.||.+|++.+ ..+|+||++ +.+|++.+.+. +.+...+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHH
Confidence 5899988888764 35799999999999999986 588888874 45788988643 4455444
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0055 Score=64.17 Aligned_cols=91 Identities=21% Similarity=0.243 Sum_probs=62.2
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCC----chHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD----~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (883)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+.... ..+.+.+.. ...
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CCC
Confidence 4455999999999999999999997 667899999999995311 111111110 000
Q ss_pred CcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee-EEe
Q 002765 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 610 (883)
Q Consensus 570 ~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG-Ia~ 610 (883)
.| +|. ..+++.+ .++|+||..||..+-+.|++- |++
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 12 233 3445555 478999999999999999873 444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.014 Score=60.73 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=71.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+... . .+.+.+.. -..+-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~-~i~~~~~~----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---E-VFVTAERV----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---c-EEEEHHHh----------------cCCCCCcH
Confidence 4689999999999999999999999887766666566676311 1 11110000 00111222
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee-EEecCcc-HHHHhccCEEec
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 626 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG-Ia~~~~~-~~a~~aad~vl~ 626 (883)
-=....+.+.-..+.++|+||..+|..+-+.|++- |++..+. ......+|+++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 22233333333357799999999999999999984 5554332 223345777763
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.011 Score=62.65 Aligned_cols=68 Identities=24% Similarity=0.264 Sum_probs=45.7
Q ss_pred ccHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhCCeeEEecCccHH-----HHhc---cCEE-eccCCchHHHHHHH
Q 002765 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARSA---SDIV-LTEPGLSVIISAVL 638 (883)
Q Consensus 572 ~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~AdvGIa~~~~~~~-----a~~a---ad~v-l~~~~~~~i~~~i~ 638 (883)
..|..-|+.++++ .+.|+++||+.||.+||..++-||.++|+.+. .... ..+. -..+.-.+|+++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 5799999888875 23577799999999999999999999988777 2222 2333 33445567777765
Q ss_pred H
Q 002765 639 T 639 (883)
Q Consensus 639 ~ 639 (883)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.011 Score=68.77 Aligned_cols=123 Identities=11% Similarity=0.066 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.+ +-..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCC------------------CCCCCCcH
Confidence 67899999999999999999999999999999999999985321 01111110 00011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEecC--ccHHHHhccCEEeccCCchHHHHHHHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~--~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
-=....+.+ ....+.|+||+.+|..+-+.|++ .|++.. ..+.....+|+++ +++..+...+..
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 111122222 23569999999999999999998 444432 2222234588887 567777666543
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.012 Score=58.94 Aligned_cols=98 Identities=9% Similarity=-0.005 Sum_probs=57.3
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchH--------HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCe
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 565 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~--------ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 565 (883)
+.||+++++++|++.|+++.++|+.... .....-+..|+..-.. .....+.+. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-CPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-CcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 1222233445432100 000000000 0
Q ss_pred EEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 566 ~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
..+-.|+-=....+.+.-..+.+.|+||..+|..+=++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 01112222233444443334679999999999999999998443
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.01 Score=62.07 Aligned_cols=90 Identities=23% Similarity=0.292 Sum_probs=63.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCc----hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~----~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
.|.+++.+.++.+++.|+++.++||.. ..++..+.+..|++...... . +++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~-v-----------------------il~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNP-V-----------------------IFAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCccccee-E-----------------------EEcC
Confidence 367889999999999999999999964 56888999889984221111 1 1111
Q ss_pred eC--cccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEe
Q 002765 569 VF--PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (883)
Q Consensus 569 ~~--P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~ 610 (883)
-+ -.+|.. .+++.+ .++|+||..+|..+-+.|++ +|.+
T Consensus 170 d~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 170 DKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 11 134544 344444 48899999999999999988 4444
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0078 Score=58.47 Aligned_cols=111 Identities=14% Similarity=0.039 Sum_probs=70.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
.++|+-++.++.+++.+++++++|+--......+-..++=.........+.. +.. .+....-.+... ....--.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn-~~~--ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSN-NDY--IHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeec-Cce--EcCCCceeeecC---CccccCC
Confidence 4689999999999999999999998876666666555541110000000000 000 000000000000 0122346
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
+|...|+.+++..+.+.|+|||+.|.+|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999999888777665
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.011 Score=61.29 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=64.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|++.|+++.++|+-+........+.+|+.... ...+.+.+ ..+.-|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 47899999999999999999999998887778888888874311 00110000 0111222
Q ss_pred cHHHHHHHHHHc---CCEEEEEcCCc-cCHHHHhhCCe-eEEec
Q 002765 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI-GIAVA 611 (883)
Q Consensus 573 ~K~~iV~~l~~~---g~~v~~iGDG~-ND~~al~~Adv-GIa~~ 611 (883)
. .-+.+.+++. ...++|+||.. +|..+-++|++ .|.+.
T Consensus 153 ~-~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 P-KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred H-HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 1 1233333433 45799999998 99999999987 45454
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.024 Score=57.10 Aligned_cols=127 Identities=20% Similarity=0.101 Sum_probs=68.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchH---------------HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~---------------ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (883)
.+.||+.+++++|++.|+++.++|..+.. ....+-++.|+... ..+..... ..++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~----~~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHH----PEDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCC----CCCC--
Confidence 36799999999999999999999987621 11122233444210 00000000 0000
Q ss_pred HHhhhcCeEEEeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE-EecCccH---HHHhcc--CEEeccCCch
Q 002765 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATD---AARSAS--DIVLTEPGLS 631 (883)
Q Consensus 558 ~~~~~~~v~ar~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI-a~~~~~~---~a~~aa--d~vl~~~~~~ 631 (883)
.-..+-.|+--....+.+.-..+.++|+||+.+|..+-++|++.. .+..|.. .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001111223223344444434577999999999999999999742 2323221 112235 7776 5566
Q ss_pred HHHHHH
Q 002765 632 VIISAV 637 (883)
Q Consensus 632 ~i~~~i 637 (883)
.+.+.+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 666554
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.017 Score=63.15 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=74.3
Q ss_pred cCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe
Q 002765 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (883)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (883)
..+++.+++.++++.|++.|+++.++||.....+..+.+.+|+....+ ..+.+.+. ....+.... -.+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~~-~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQG-DKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccCC-CCCC
Confidence 568899999999999999999999999999999999999998753111 11111110 000000000 0133
Q ss_pred CcccHHHHHHHHHH-cCCEEEEEcCCccCHHHHhhCCeeE
Q 002765 570 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 608 (883)
Q Consensus 570 ~P~~K~~iV~~l~~-~g~~v~~iGDG~ND~~al~~AdvGI 608 (883)
.|+-+....+.+-. ....++|+||..+|+.+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 45566666665533 3478999999999999999999864
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.02 Score=62.18 Aligned_cols=116 Identities=19% Similarity=0.129 Sum_probs=68.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+-+......+-+..+.......-..+.+.+.. ..+-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 47899999999999999999999998877766655544321100000001000000 0111122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEec-Ccc--HHHHhccCEEe
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DAT--DAARSASDIVL 625 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~~-~~~--~~a~~aad~vl 625 (883)
-=..+.+.+.-....++||||+.+|..|-++|++....- .|. ......+|+++
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi 262 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF 262 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE
Confidence 222333444434567999999999999999999865432 321 11123578887
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.029 Score=62.71 Aligned_cols=120 Identities=17% Similarity=0.128 Sum_probs=77.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+.++.|++.|+++.++|+.....+..+-+..||.... ...+.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985311 0011100000 0011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEE-ecCccHHH-HhccCEEeccCCchHH
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADATDAA-RSASDIVLTEPGLSVI 633 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa-~~~~~~~a-~~aad~vl~~~~~~~i 633 (883)
-=....+.+.-....++|+||..+|+.|-+.|++-.. +..+.+.. ...||+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 2233444444446779999999999999999998433 33332222 23588887 455544
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.019 Score=58.53 Aligned_cols=95 Identities=15% Similarity=0.154 Sum_probs=63.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+++++|++.|+++.++|+-+........+.+|+.... ...+...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 47899999999999999999999998888888888889974311 00111000 0011222
Q ss_pred cH--HHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE
Q 002765 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (883)
Q Consensus 573 ~K--~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI 608 (883)
-. ..+.+.+.-....++++||+.+|+.+-++|++-.
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 11 2233333333467899999999999999988743
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.027 Score=53.33 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=61.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCc--------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~--------~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (883)
-++.|++.++++.|+++|+++.++|+.. ......+.+.+|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3678999999999999999999999988 66777788888874210 00000 0
Q ss_pred CeEEEeCcccHHHHHHHHH-HcCCEEEEEcC-CccCHHHHhhCCe
Q 002765 564 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADI 606 (883)
Q Consensus 564 ~v~ar~~P~~K~~iV~~l~-~~g~~v~~iGD-G~ND~~al~~Adv 606 (883)
..+-.|+-=..+.+.++ -..+.++|+|| ..+|..+-+.|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111221123344442 34467999999 5899999998876
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.023 Score=59.39 Aligned_cols=100 Identities=11% Similarity=0.017 Sum_probs=64.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc-
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P- 571 (883)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+.... ...+.+.+ +.+..|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 57899999999999999999999998888887777777774310 00110000 001112
Q ss_pred -ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee--EEecCc
Q 002765 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAVADA 613 (883)
Q Consensus 572 -~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG--Ia~~~~ 613 (883)
+-=....+.+.-....++|+||..+|+.+-++|++. +++.++
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 111122233332345699999999999999999995 445443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.076 Score=52.07 Aligned_cols=103 Identities=16% Similarity=0.202 Sum_probs=65.3
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHH---HHHHHh---C--CCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~---~ia~~~---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (883)
+|.+.|+++++++++++.|++++.+||.....+. ...+++ | ++.. ..+.... ..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g----~li~~~g-------~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHG----PVLLSPD-------RLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCc----eEEEcCC-------cchhh-hhc
Confidence 4678899999999999999999999999987764 444442 2 3210 0010000 00000 000
Q ss_pred cCeEEEeCcc-cHHHHHHHHHH-----cCCEEEEEcCCccCHHHHhhCCee
Q 002765 563 ADGFAGVFPE-HKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 563 ~~v~ar~~P~-~K~~iV~~l~~-----~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
.+. ...|+ .|.+.++.+++ ....++..||+.+|+.+.++++|-
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 111 22233 48888877776 346778899999999999987654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.032 Score=57.95 Aligned_cols=119 Identities=12% Similarity=0.099 Sum_probs=72.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++. +++.++|+-.......+-++.|+.... ...+...+. ....|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-------------------CCCCCC
Confidence 5689999999999999 999999999888888888888885321 011100000 001122
Q ss_pred cH--HHHHHHH-HHcCCEEEEEcCCc-cCHHHHhhCCe-eEEecC--ccHHHHhccCEEeccCCchHHHH
Q 002765 573 HK--YEIVKRL-QERKHICGMTGDGV-NDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIIS 635 (883)
Q Consensus 573 ~K--~~iV~~l-~~~g~~v~~iGDG~-ND~~al~~Adv-GIa~~~--~~~~a~~aad~vl~~~~~~~i~~ 635 (883)
.. ...++.+ .-....++|+||+. +|..+=+.+++ +|.... .+......+|.++ +++..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 11 2233333 22345699999998 89999999997 334332 2212223456666 45555443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.018 Score=57.83 Aligned_cols=91 Identities=9% Similarity=0.038 Sum_probs=57.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.++++.|+++|+++.++|+... +....+..|+.... ...+.+.+ ..+..|.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAE-------------------IKKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhh-------------------cCCCCCC
Confidence 5789999999999999999999997532 35567777774321 00110000 0111121
Q ss_pred cHHHHHHHHHHc---CCEEEEEcCCccCHHHHhhCCee
Q 002765 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 573 ~K~~iV~~l~~~---g~~v~~iGDG~ND~~al~~AdvG 607 (883)
..-+-+.+++. ...++|+||..+|+.+-++|++-
T Consensus 144 -p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 -PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22222333333 35689999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.01 Score=58.55 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=66.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
.++.|++.+.++.|++.|++++++|+..........+++|+... ....+...+.. ..+-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 45789999999999999999999999999999999999998621 11111111000 000011
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 572 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
+-=..+.+.+.-..+.++++||+.+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 111234444444456799999999999999998864
|
... |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.18 Score=56.39 Aligned_cols=66 Identities=24% Similarity=0.217 Sum_probs=47.1
Q ss_pred EeCcc---cHHHHHHHHHHc-C-----C-EEEEEcCCccCHHHHhh-----CCeeEEecCccHHHHhccCEEeccCCchH
Q 002765 568 GVFPE---HKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLSV 632 (883)
Q Consensus 568 r~~P~---~K~~iV~~l~~~-g-----~-~v~~iGDG~ND~~al~~-----AdvGIa~~~~~~~a~~aad~vl~~~~~~~ 632 (883)
.+.|. +|..-++.+.+. | . .++++||+.||..|++. +++||+|++|.+.. .|++.| ++-+.
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L--~dp~e 368 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSL--RDPSE 368 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEc--CCHHH
Confidence 45563 898888777654 2 1 25899999999999996 68999999765432 578887 44555
Q ss_pred HHHHH
Q 002765 633 IISAV 637 (883)
Q Consensus 633 i~~~i 637 (883)
+...+
T Consensus 369 V~~~L 373 (384)
T PLN02580 369 VMEFL 373 (384)
T ss_pred HHHHH
Confidence 55554
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.041 Score=55.03 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=60.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ...+.+.+. ...+-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988776 5555557874310 000100000 00011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv 606 (883)
-=..+.+.+.-....+.++||...|..+-+++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2223334443345779999999999999998876
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.068 Score=53.22 Aligned_cols=111 Identities=6% Similarity=-0.038 Sum_probs=69.6
Q ss_pred EEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCC-chHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002765 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (883)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (883)
......-+-+++||+.+.++.|+++|+++.++|+- ....+..+-..+|+..... ...+....+
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd- 99 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD- 99 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-
Confidence 33444445578899999999999999999999975 8888888888888741000 000000000
Q ss_pred cCeEEEeCcccH--HHHHHHHHHc------CCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 563 ADGFAGVFPEHK--YEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 563 ~~v~ar~~P~~K--~~iV~~l~~~------g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
..+.++-.+..| ..+.+.+.+. ...++|+||...|+.+-++|++-...
T Consensus 100 ~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 DRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 001111111112 2334444432 35799999999999999999886554
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.17 Score=48.96 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=76.0
Q ss_pred HHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHh
Q 002765 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (883)
Q Consensus 451 ~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 530 (883)
..+.+.++|.+.+.+-..+ +++..= ....-|++.+=+++++.+|+++.++|..++..+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999988775544 333221 1334577888889999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe-CcccHHHHHHHHHHc---CCEEEEEcCCc-cCHHHHhhCC
Q 002765 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV-FPEHKYEIVKRLQER---KHICGMTGDGV-NDAPALKKAD 605 (883)
Q Consensus 531 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~-~P~~K~~iV~~l~~~---g~~v~~iGDG~-ND~~al~~Ad 605 (883)
|++- ..+. -|- -..+-+++++. .+.|+|+||.. .|+-+=+.|+
T Consensus 84 ~v~f-------------------------------i~~A~KP~-~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 84 GVPF-------------------------------IYRAKKPF-GRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred CCce-------------------------------eecccCcc-HHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 9852 1111 122 23455566654 46799999996 5877665554
Q ss_pred e
Q 002765 606 I 606 (883)
Q Consensus 606 v 606 (883)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 4
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.018 Score=61.12 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=48.7
Q ss_pred EeCc--ccHHHHHHHHHHcCCEEEEEcC----CccCHHHHhhC-CeeEEecCccHHHHhccCEEe
Q 002765 568 GVFP--EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 625 (883)
Q Consensus 568 r~~P--~~K~~iV~~l~~~g~~v~~iGD----G~ND~~al~~A-dvGIa~~~~~~~a~~aad~vl 625 (883)
.++| -+|..-++.|.+..+.|+++|| |.||.+||+.| -.|++++++++..|..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 5899999998887788999999 99999999987 678888899999998776554
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.029 Score=56.39 Aligned_cols=92 Identities=12% Similarity=0.129 Sum_probs=59.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
-++.||+.++++.|++.|+++.++|+. ..+..+-+..|+..-. ...+ +.+. ..+..|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~-~~~~------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIV-DADE------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEee-ehhh------------------CCCCCC
Confidence 367899999999999999999999987 5567777778874210 0000 0000 001122
Q ss_pred ccHHHHHHHHHHc---CCEEEEEcCCccCHHHHhhCCee
Q 002765 572 EHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 572 ~~K~~iV~~l~~~---g~~v~~iGDG~ND~~al~~AdvG 607 (883)
... -+-+.+++. .+.++|+||+.+|..+-++|++.
T Consensus 144 ~~~-~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPE-TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChH-HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 211 122233332 35688999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.097 Score=52.39 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.9
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCc
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQ 519 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~ 519 (883)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 56899999999999999999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.062 Score=60.82 Aligned_cols=114 Identities=19% Similarity=0.161 Sum_probs=68.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHH-HhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~-~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
++.||+.+.++.|++.|+++.++|+.....+...-+ ..|+.... ...+.+.+. -..+-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 467999999999999999999999998877766554 56763210 000000000 0011112
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE-EecCc--cHHHHhccCEEe
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADA--TDAARSASDIVL 625 (883)
Q Consensus 572 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI-a~~~~--~~~a~~aad~vl 625 (883)
+-=....+.+.-..+.++|+||+.+|..+-++|++.. ++..+ .+.....+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 2112233333333567999999999999999999863 34332 222233466655
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.075 Score=55.32 Aligned_cols=120 Identities=15% Similarity=0.118 Sum_probs=72.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.++++.|+ .|+++.++|+.....+...-++.|+.... ...+.+.+. ...-|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-------------------~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQV-------------------GVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECcc-------------------CCCCCC
Confidence 46899999999999 68999999998888777777778874210 000000000 001121
Q ss_pred cHHHHHHHHHHcC----CEEEEEcCCc-cCHHHHhhCCee-EEec-CccH-HHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQERK----HICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~g----~~v~~iGDG~-ND~~al~~AdvG-Ia~~-~~~~-~a~~aad~vl~~~~~~~i~~~i 637 (883)
..-+-+.+++.| +.++|+||+. +|+.+=+.|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 -p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 -VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred -HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 122223333332 5699999998 799999999985 4443 2221 1112467777 5566665543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.049 Score=52.80 Aligned_cols=96 Identities=17% Similarity=0.117 Sum_probs=57.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCch---------------HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (883)
++.|++.++++.|++.|+++.++|..+. .....+.+.+|+.....-. ...+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF-CPHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE-CCCCCCCC---------
Confidence 4689999999999999999999998652 3445566777774210000 00000000
Q ss_pred HHhhhcCeEEEeCcccHHHHHHHHHH---cCCEEEEEcCCccCHHHHhhCCee
Q 002765 558 ELIEKADGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 558 ~~~~~~~v~ar~~P~~K~~iV~~l~~---~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
... ..|+ ..-+-+.+++ ..+.+.|+||...|..+-+.+++-
T Consensus 97 -------~~~-~KP~-~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSC-RKPK-PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCC-CCCC-HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000 0121 1122223333 335699999999999999988874
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.12 Score=54.01 Aligned_cols=104 Identities=18% Similarity=0.132 Sum_probs=66.4
Q ss_pred CCCCChHHHHHHH--HhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 493 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 493 ~lr~~~~~~I~~l--~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
|+.|+.++.++.+ ++.|+.+.++|.-|...-..+-+.-|+..... ...+.....+.-....+... ..+-+.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~--~I~TNpa~~~~~G~l~v~py--h~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS--EIFTNPACFDADGRLRVRPY--HSHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc--eEEeCCceecCCceEEEeCc--cCCCCCcCC
Confidence 5678999999999 56899999999999888888888888853210 01111000000000000000 012344565
Q ss_pred c-ccHHHHHHHHHHc----C---CEEEEEcCCccCHHH
Q 002765 571 P-EHKYEIVKRLQER----K---HICGMTGDGVNDAPA 600 (883)
Q Consensus 571 P-~~K~~iV~~l~~~----g---~~v~~iGDG~ND~~a 600 (883)
| .=|..+++.+++. | ..|.++|||.||...
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 5 4799999888765 4 689999999999643
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.092 Score=52.29 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=59.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCc-hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
..+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... +...-
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------~~~~K 91 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------PHAVK 91 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------cCCCC
Confidence 3577999999999999999999999987 5667777777776310 00011
Q ss_pred cccHHHHHHHHHH---cCCEEEEEcCCc-cCHHHHhhCCee
Q 002765 571 PEHKYEIVKRLQE---RKHICGMTGDGV-NDAPALKKADIG 607 (883)
Q Consensus 571 P~~K~~iV~~l~~---~g~~v~~iGDG~-ND~~al~~AdvG 607 (883)
|.. ..+-+.+++ ....++|+||.. .|..+-+.|++-
T Consensus 92 P~p-~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 92 PPG-CAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CCh-HHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 211 122223333 345699999998 799999999883
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.29 Score=52.20 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=58.7
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHH---HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (883)
..++-|++.+.++.+++.|+++.++|+..... +...-++.|+..... . .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~--d-----------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE--E-----------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc--c-----------------------eEEe
Confidence 34577999999999999999999999977433 334456678753110 0 1233
Q ss_pred EeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHH
Q 002765 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601 (883)
Q Consensus 568 r~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al 601 (883)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 3222345556666666667899999999998654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.06 Score=52.35 Aligned_cols=91 Identities=22% Similarity=0.254 Sum_probs=55.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
+..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..+.+.+. +..+-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f--~~i~~~~~-----------------~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F--DLILGSDE-----------------FGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C--cEEEecCC-----------------CCCCcCHH
Confidence 34579999999999999999999999988887776664 3211 0 00100000 00111111
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCC
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Ad 605 (883)
-=..+.+.+.-.. .++++||..+|..+-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 1112222222224 7999999999999887764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.08 Score=52.17 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=57.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCc---------------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~---------------~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (883)
++-|++.+++++|++.|+++.++|.-. ......+.+..|+.-. ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD----DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee----EEEECCCCC----CC---
Confidence 356899999999999999999999742 3345566677776410 000000000 00
Q ss_pred HHhhhcCeEEEeCcccHHHHHH-HHHHc---CCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 558 ELIEKADGFAGVFPEHKYEIVK-RLQER---KHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 558 ~~~~~~~v~ar~~P~~K~~iV~-~l~~~---g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
.... .-|. ..+++ .+++. ...+.|+||+.+|..+-++|++-..
T Consensus 98 ------~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------NCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------CCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0000 0122 22222 22222 3569999999999999999988543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.6 Score=49.31 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=59.3
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHH--HHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~--~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (883)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..+.. ...+... +
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~Ii~s~---------~-------- 78 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMIISSG---------E-------- 78 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceEEccH---------H--------
Confidence 556666788999999999999999999999986554433 4557788753110 0111000 0
Q ss_pred CeEEEeCcccHHHHHHHHHH---cCCEEEEEcCCccCHHHHhhCC
Q 002765 564 DGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKAD 605 (883)
Q Consensus 564 ~v~ar~~P~~K~~iV~~l~~---~g~~v~~iGDG~ND~~al~~Ad 605 (883)
.....+.+.+++ .+..+.++||+.+|...+..++
T Consensus 79 --------~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 --------IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred --------HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 001122222232 2467999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.12 Score=52.89 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=56.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... ...+...+ +...-|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~-------------------~~~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYE-------------------VGAEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecc-------------------cCCCCCC
Confidence 56799999999999999999999975543 45666777764210 00000000 0000121
Q ss_pred cHHHHHHHHHHc---CCEEEEEcCCc-cCHHHHhhCCe
Q 002765 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI 606 (883)
Q Consensus 573 ~K~~iV~~l~~~---g~~v~~iGDG~-ND~~al~~Adv 606 (883)
..-+-+.+++. ...++||||+. +|+.+-++|++
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 -PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred -HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11222333333 46799999997 89999888865
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.085 Score=51.20 Aligned_cols=94 Identities=17% Similarity=0.022 Sum_probs=63.6
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeC
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 570 (883)
.-++||++.+.++.|+ .++++.+.|.-....+..+-+.+|+.... . ..+.+.+. +.+.-
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f-~~i~~~~d------------------~~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-G-YRRLFRDE------------------CVFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-e-eeEEECcc------------------ccccC
Confidence 3457999999999999 57999999999999999999988874211 0 11111100 00111
Q ss_pred cccHHHHHHHHHH---cCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 571 PEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 571 P~~K~~iV~~l~~---~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
|. +.+.+++ ..+.+.|+||..+|..+-++|.|-|.
T Consensus 102 P~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 102 GK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred Ce----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 22 3333433 45679999999999998877766554
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.2 Score=52.14 Aligned_cols=100 Identities=15% Similarity=0.121 Sum_probs=56.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHH-HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~-ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
++.||+.+.++.|++.|+++.++||-....... ..+..|+... . ...+.+.+.+ . -..+-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-f-~~i~~~~~~~-------~--------~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-M-HHVVTGDDPE-------V--------KQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-C-CEEEECChhh-------c--------cCCCCCc
Confidence 467999999999999999999999977543322 2222233210 0 0000000000 0 0001112
Q ss_pred ccHHHHHHHHH---HcCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 572 EHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 572 ~~K~~iV~~l~---~~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
+-=...++.+. -..+.++|+||+..|+.|-++|++-..
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 21123333332 223679999999999999999998443
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.17 Score=53.67 Aligned_cols=67 Identities=21% Similarity=0.195 Sum_probs=48.3
Q ss_pred EEeCcccHHHHHHHHHHc----CCEEEEEcCCccCHHHHhhC--------CeeEEecCccHHHHhccCEEeccCCchHHH
Q 002765 567 AGVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVII 634 (883)
Q Consensus 567 ar~~P~~K~~iV~~l~~~----g~~v~~iGDG~ND~~al~~A--------dvGIa~~~~~~~a~~aad~vl~~~~~~~i~ 634 (883)
.+..+.+|...++.+.+. ...++|+||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHH
Confidence 344466888888776554 34799999999999999998 4788886443 4567889884 555555
Q ss_pred HHH
Q 002765 635 SAV 637 (883)
Q Consensus 635 ~~i 637 (883)
..+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.29 Score=54.46 Aligned_cols=98 Identities=13% Similarity=0.061 Sum_probs=58.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCC---------------chHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchH
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~ 556 (883)
-++.|++.++++.|+++|+++.++|+- .......+.+..|+..+ ..+.+... ..+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~----~sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHF----PED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCc----Ccc--
Confidence 367899999999999999999999983 12334555666666310 00000000 000
Q ss_pred HHHhhhcCeEEEeCcccHHHHHHHH-HH---cCCEEEEEcCCccCHHHHhhCCeeEE
Q 002765 557 DELIEKADGFAGVFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGIA 609 (883)
Q Consensus 557 ~~~~~~~~v~ar~~P~~K~~iV~~l-~~---~g~~v~~iGDG~ND~~al~~AdvGIa 609 (883)
...+| .| |..++..+ ++ ....+.|+||+.+|..+-+.|++-..
T Consensus 99 -------~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 -------NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -------cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 12 22333322 22 23679999999999999999988543
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.51 Score=49.01 Aligned_cols=80 Identities=19% Similarity=0.225 Sum_probs=53.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHH---HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
-|+-|++.++++.+++.|++|+++||..... +..--++.|++.- .. ++-|
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~-----------------------LiLR 171 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KH-----------------------LILR 171 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----Ce-----------------------eeec
Confidence 4677999999999999999999999998754 2222345666421 11 1111
Q ss_pred e-------CcccHHHHHHHHHHcC-CEEEEEcCCccCH
Q 002765 569 V-------FPEHKYEIVKRLQERK-HICGMTGDGVNDA 598 (883)
Q Consensus 569 ~-------~P~~K~~iV~~l~~~g-~~v~~iGDG~ND~ 598 (883)
- ..+-|.+.-+.+.+.| .+++.+||-.+|.
T Consensus 172 ~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 172 GLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred CCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 1 0112667666777666 4678899999886
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.88 Score=45.98 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=32.5
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCC
Q 002765 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (883)
Q Consensus 497 ~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~ 533 (883)
.+...+.+|+++|++|+.+|.-....-...-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5778899999999999999998887777888888876
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.42 E-value=2.5 Score=47.07 Aligned_cols=61 Identities=21% Similarity=0.216 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHc-------CCEEEEEcCCccCHHHHhhC-----CeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~-------g~~v~~iGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+|...++.+-+. +..++++||...|-.|++.. ++||.+|.... ..+|++.| ++.+.+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 788888777653 23689999999999999865 47777774221 24688888 4556665554
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.22 Score=51.76 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=62.4
Q ss_pred CCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhC---CCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~G---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (883)
+-++.||+.+++++|+++|+++.++|..+......+-+..+ +..- ++.... ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--------------------f~~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--------------------FSGYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--------------------cceEEE-eCccc
Confidence 45789999999999999999999999888766555544432 2110 000000 00111
Q ss_pred EeCcccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 568 r~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
.-.|+-=..+.+.+.-..+.++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1122222334444443446799999999999999999986543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.48 Score=44.68 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC-chHHHHHHHHHhC
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 531 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~G 531 (883)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777767666666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.24 Score=44.63 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=36.1
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHH---HHhCCC
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~Gi~ 533 (883)
|++.-.+.+=|++.++|+.|+++|++++++|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667788899999999999999999999998866555544 556764
|
... |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=91.56 E-value=0.43 Score=47.25 Aligned_cols=40 Identities=8% Similarity=-0.006 Sum_probs=31.4
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchH------------HHHHHHHHhCCC
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMG 533 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~------------ta~~ia~~~Gi~ 533 (883)
+-||+.++++.|+++|+++.++|.-... ....+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 3489999999999999999999975432 345667777874
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=91.05 E-value=0.76 Score=58.97 Aligned_cols=125 Identities=15% Similarity=0.162 Sum_probs=78.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc-
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE- 572 (883)
Q Consensus 494 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~- 572 (883)
+.||+.+.++.|+++|+++.++|+-....+...-++.|+....++ ..+...+ +.+.-|+
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~-------------------~~~~KP~P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADA-------------------FENLKPAP 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcc-------------------cccCCCCH
Confidence 579999999999999999999999988888888888888421110 1111100 1111222
Q ss_pred -cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCe-eEEecCc---cHHHHhccCEEeccCCchHHHHHHH
Q 002765 573 -HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 -~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~Adv-GIa~~~~---~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
-=....+.+.-..+.++|+||..+|+.+-+.|++ -|++..+ .+.....+|+++.+-.--++...+.
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 1123334444345679999999999999999998 4444322 2334456788885433223344433
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=90.80 E-value=0.29 Score=50.41 Aligned_cols=90 Identities=13% Similarity=0.039 Sum_probs=54.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHH--HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE-
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG- 568 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t--a~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar- 568 (883)
-++.|++.+.++.|++.|+++.++|...... ........++... ... +++.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~------------------------fd~--v~~s~ 146 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL------------------------FDA--VVESC 146 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh------------------------CCE--EEEee
Confidence 3578999999999999999999999865432 2222222333110 000 1111
Q ss_pred ----eCcc--cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee
Q 002765 569 ----VFPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 569 ----~~P~--~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
.-|+ -=....+.+.-....++|+||...|+.+=++|++-
T Consensus 147 ~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 147 LEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred ecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 1122 11222233332345689999999999999999884
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=90.79 E-value=1.2 Score=55.55 Aligned_cols=66 Identities=8% Similarity=0.068 Sum_probs=43.5
Q ss_pred HHHHHHHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHH-HhCCCeEEEEcCCchHHHHHHHH
Q 002765 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGR 528 (883)
Q Consensus 450 ~~~~~~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~aGi~v~mlTGD~~~ta~~ia~ 528 (883)
...+.+.+...|.+.+-|.. +++-.....-.+-++..+++++| ++.|+.|+++||+...+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 33445555556666665544 33322112235567899999997 77899999999999888776653
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.18 Score=52.41 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=59.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.++++.| ++++.++|+.....+...-+..|+.... +...+.+.+.. ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 4999999999887777777777774321 00011110000 0011122
Q ss_pred cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeEEe
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (883)
Q Consensus 573 ~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa~ 610 (883)
-=....+.+.-..+.++|+||..+|..+=++|++....
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 11222233322335689999999999999999987653
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.00 E-value=2.1 Score=43.43 Aligned_cols=110 Identities=16% Similarity=0.178 Sum_probs=65.8
Q ss_pred CCCCChHHHHHHHHhCCC-eEEEEcCCchHHHHHHHHHhCCCCC---CCC-CCccc--CcccccccCcchHHHHhhhcCe
Q 002765 493 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTN---MYP-SSSLL--GQDKDASIAALPVDELIEKADG 565 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~Gi~~~---~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~v 565 (883)
|.-|+..++|+.+++.|- .++++|--|......+-+..|+.+- +.. ...+. |.-.-...+ .-+-
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH---------~~hs 154 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH---------TQHS 154 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC---------CCCc
Confidence 567899999999999997 9999998887777777777776320 000 00000 000000000 0012
Q ss_pred EEEeCcc-cHHHHHHHHHHcC-------CEEEEEcCCccCH-HHHhhCCeeEEec
Q 002765 566 FAGVFPE-HKYEIVKRLQERK-------HICGMTGDGVNDA-PALKKADIGIAVA 611 (883)
Q Consensus 566 ~ar~~P~-~K~~iV~~l~~~g-------~~v~~iGDG~ND~-~al~~AdvGIa~~ 611 (883)
+.++.|. =|..++..++..+ +.+.++|||.||. |+++...--+||.
T Consensus 155 C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 155 CNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred cCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 3444332 4666666665432 3789999999995 7777665556663
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=88.95 E-value=1.3 Score=43.74 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=74.6
Q ss_pred HHHccCeEEEEEeeccCCCCCCCCCCCceEEEeeccCCCCCCChHHHHHHHHhCCCe--EEEEcCC-------chHHHHH
Q 002765 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIGKE 525 (883)
Q Consensus 455 ~~~~G~r~l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~--v~mlTGD-------~~~ta~~ 525 (883)
+.+.|.|.+.+=..+ ++ ..-=++.+-|+..+.+++|++.+.. |.++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667788887765443 11 1123577889999999999999874 9999976 3788899
Q ss_pred HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccHHHHHHHHHHc-----CCEEEEEcCCc-cCHH
Q 002765 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGV-NDAP 599 (883)
Q Consensus 526 ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l~~~-----g~~v~~iGDG~-ND~~ 599 (883)
+++.+|+.- + .+...-|.-..++.+.++.+ .+.++|+||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 12223576666778887755 56799999985 5766
Q ss_pred HHhhCC
Q 002765 600 ALKKAD 605 (883)
Q Consensus 600 al~~Ad 605 (883)
+=+..+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 544443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.99 E-value=0.99 Score=46.01 Aligned_cols=95 Identities=11% Similarity=0.009 Sum_probs=54.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHH-HHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia-~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P 571 (883)
++.|++.++++.|++.|+++.++|.-+.......- +..++... . ...+...+ +...-|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecc-------------------cCCCCC
Confidence 46899999999999999999999987655433221 11232110 0 00000000 000112
Q ss_pred --ccHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCeeE
Q 002765 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (883)
Q Consensus 572 --~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGI 608 (883)
+==....+.+.-....+.++||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1112233333333466899999999999999998843
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.24 E-value=1.5 Score=44.42 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=55.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcc
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 572 (883)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+..-. +. .. + ..+.++....
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f--------------~-----~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF--------------S-----EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc--------------c-----EEEEeccCcc
Confidence 36899999999999975 56666764444333344555653100 00 00 0 0011111111
Q ss_pred cHHHHHH-HHHHcC-CEEEEEcCCccCHHHHhhC--CeeE-EecCcc
Q 002765 573 HKYEIVK-RLQERK-HICGMTGDGVNDAPALKKA--DIGI-AVADAT 614 (883)
Q Consensus 573 ~K~~iV~-~l~~~g-~~v~~iGDG~ND~~al~~A--dvGI-a~~~~~ 614 (883)
|-++++ .+++.| +.++|+||..+|..+-++| ++-. .+..|.
T Consensus 132 -kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 132 -KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred -cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 233333 333333 4588999999999999999 8843 333443
|
2 hypothetical protein; Provisional |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=86.11 E-value=1.5 Score=48.38 Aligned_cols=91 Identities=11% Similarity=0.069 Sum_probs=66.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHH----hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~----~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (883)
++.+++.++++.|++.|+++.++|.-+...+..+-++ +|+.... ...+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999888877 6653210 0112
Q ss_pred eCcccHHHHHHHH-HH---cCCEEEEEcCCccCHHHHhhCCeeEEec
Q 002765 569 VFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGIAVA 611 (883)
Q Consensus 569 ~~P~~K~~iV~~l-~~---~g~~v~~iGDG~ND~~al~~AdvGIa~~ 611 (883)
..+.-|...++.+ ++ ....++|+||...|..+.+.+...+.+.
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2234455544433 32 2467999999999999999988876543
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=85.55 E-value=2 Score=47.32 Aligned_cols=48 Identities=19% Similarity=0.256 Sum_probs=39.3
Q ss_pred EeeccCCCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHH---HHhCCC
Q 002765 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (883)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~Gi~ 533 (883)
|.+.-.+.+=|++.++|+.||+.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556677799999999999999999999999977777766 456763
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=84.88 E-value=0.84 Score=45.80 Aligned_cols=92 Identities=12% Similarity=0.063 Sum_probs=58.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEE---e
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---V 569 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar---~ 569 (883)
++.+++.+++++|+ .++.++|+-+...+....+..|+.... + ..+...+ +-.+ .
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~------------------~~~~~~~~ 140 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDT------------------ANPDYLLP 140 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeec------------------ccCccCCC
Confidence 36789999999997 478999998888888888889884310 0 0110000 0000 1
Q ss_pred Ccc--cHHHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee
Q 002765 570 FPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 570 ~P~--~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
-|. -=..+++.+......++|+||...|..+=++|++-
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 222 11233444444456789999999999998888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.95 E-value=1.7 Score=43.64 Aligned_cols=92 Identities=14% Similarity=0.121 Sum_probs=57.7
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCchHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEeCcccH
Q 002765 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (883)
Q Consensus 495 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 574 (883)
-| ..+.++.|++. ++..++||.....+...-++.|+.... ...+...+.. ..+-.|+-=
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~ 148 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTF 148 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHH
Confidence 34 46899999875 899999999999999988889885311 0111110000 011112222
Q ss_pred HHHHHHHHHcCCEEEEEcCCccCHHHHhhCCee
Q 002765 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 575 ~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvG 607 (883)
....+.++-....+.++||..+|+.+=++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 233333333345688999999999999999874
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=82.60 E-value=7.6 Score=37.86 Aligned_cols=103 Identities=15% Similarity=0.136 Sum_probs=67.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCchHHHHH---HHHHh-----CCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRL-----GMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~---ia~~~-----Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (883)
|..++++.+..+.+++.|++++-+|+....-+.. .-++. +++. ..+. .+...+-..+. -
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~-----Gpv~-------~sP~~l~~al~-r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD-----GPVL-------LSPDSLFSALH-R 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC-----CCEE-------ECCcchhhhhh-c
Confidence 7899999999999999999999999998644433 22233 3322 1110 01111111110 1
Q ss_pred CeEEEeCcccHHHHHHHHHHc-----CCEEEEEcCCccCHHHHhhCCee
Q 002765 564 DGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIG 607 (883)
Q Consensus 564 ~v~ar~~P~~K~~iV~~l~~~-----g~~v~~iGDG~ND~~al~~AdvG 607 (883)
.+..+-.-+.|....+.++.. ...++..|+..+|+.+.++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 134444457899999888864 45678899999999999988664
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=81.92 E-value=2.7 Score=44.02 Aligned_cols=81 Identities=22% Similarity=0.193 Sum_probs=54.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCchH---HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEEe
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (883)
++=|++.+.++.+++.|++|..+||.+.. ....=-++.|.... .. ++-|.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~----~~-----------------------l~lr~ 167 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW----DH-----------------------LILRP 167 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB----SC-----------------------GEEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc----ch-----------------------hcccc
Confidence 44578999999999999999999998754 22223355665321 00 12222
Q ss_pred C--------cccHHHHHHHHHHcC-CEEEEEcCCccCHHH
Q 002765 570 F--------PEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (883)
Q Consensus 570 ~--------P~~K~~iV~~l~~~g-~~v~~iGDG~ND~~a 600 (883)
. .+-|...-+.+++.| ++++++||..+|..-
T Consensus 168 ~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 168 DKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1 234888888888885 578889999999775
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=81.10 E-value=20 Score=39.95 Aligned_cols=61 Identities=20% Similarity=0.196 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHc-C------CEEEEEcCCccCHHHHhhC-----CeeEEecCccHHHHhccCEEeccCCchHHHHHH
Q 002765 573 HKYEIVKRLQER-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iV~~l~~~-g------~~v~~iGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+|...++.+.+. + ..++++||...|-.|++.. ++||-++.+.. ...|++.| ++-+.+...+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L--~dp~eV~~~L 341 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSL--QEPDEVMEFL 341 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeC--CCHHHHHHHH
Confidence 788888777654 1 2489999999999999853 67777764321 22688888 4455555544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 883 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-117 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-39 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-38 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-37 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 5e-37 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 9e-24 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 9e-24 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-23 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-23 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-19 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-19 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 4e-11 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 1e-05 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 5e-08 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 5e-08 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 6e-06 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 1e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 883 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-142 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-140 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-130 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-45 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-44 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 3e-30 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 4e-29 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 6e-25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 9e-18 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-16 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-15 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 6e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-07 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 4e-06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 1e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 2e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 3e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 4e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 5e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 7e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 3e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 3e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1213 bits (3140), Expect = 0.0
Identities = 742/855 (86%), Positives = 793/855 (92%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
SLE+IKNE+VDLE+IPIEEVF+QLKCSREGLT+ EG R+ +FGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
A ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
DA++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
IAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFML
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y AI
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
MTV+FFW KTDFFSD FGVRS+R E+M A+YLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 788 PGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
PG LL AF+IAQL+AT IAVYANW FA+I G GWGWAGVIWLYS+VTYFPLD+ KF IR
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 848 YILSGKAWDTLLENK 862
YILSGKAW L ENK
Sbjct: 843 YILSGKAWLNLFENK 857
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1083 bits (2802), Expect = 0.0
Identities = 303/870 (34%), Positives = 476/870 (54%), Gaps = 45/870 (5%)
Query: 4 DKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKV 63
D + EE + + R+ E++ + +R GLTS+E R +G N+++E+KE+
Sbjct: 56 DGHDAEEEEEEATPGGGRVVPEDMLQ--TDTRVGLTSEEVVQRRRKYGLNQMKEEKENHF 113
Query: 64 LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123
LKFLGF P+ +VME AA++A L DW DF I LL++N+ + F++E AG
Sbjct: 114 LKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAG 166
Query: 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKID 182
+ L LA K VLRDG E +A +VPGD++ ++ G I+PAD R++ D L++D
Sbjct: 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVD 226
Query: 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHF 241
QSALTGESL V K+ D+VF+ S K+GE V+ ATG +TF G+AA LV++ GHF
Sbjct: 227 QSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHF 286
Query: 242 QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 301
+VL IG + + ++ + + + ++ L + I G+P+ +P V++ T
Sbjct: 287 TEVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTT 345
Query: 302 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE 361
MA+G+ L+++ AI ++++AIE +AG+++LCSDKTGTLT NKL++ GV+ E
Sbjct: 346 MAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPE 402
Query: 362 HVILLAARASRTENQ--DAIDAAIVGMLADPKEARAGVRE---VHFLPFNPVDKRTALTY 416
++L A A+ + + DAID A + L A++ + + + F PF+PV K+
Sbjct: 403 DLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVV 462
Query: 417 IDSDGNWHRASKGAPEQILALCN----CREDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472
G KGAP +L E+V + + +FA RG RSLGVAR+
Sbjct: 463 ESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-- 520
Query: 473 KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532
W+++G++P DPPRHD+ +T+ A LG+++KM+TGD + I +ET R+LG+
Sbjct: 521 ------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTG 592
GTN+Y + L + V + +E ADGFA VFP+HKY +V+ LQ+R ++ MTG
Sbjct: 575 GTNIYNAERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTG 633
Query: 593 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652
DGVNDAP+LKKAD GIAV ++DAARSA+DIV PGL II A+ TSR IF RM Y +
Sbjct: 634 DGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
Query: 653 YAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLK 712
Y ++++I + + L I + +V+ IAI D + I+ D S P W L
Sbjct: 694 YRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLP 753
Query: 713 EIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQA 772
+++ V+LG LA+ T + M + M L+LQ+S+
Sbjct: 754 KLWGMSVLLGVVLAVGTWITVTTMYAQ------GENGGIVQNFGNMDEVLFLQISLTENW 807
Query: 773 LIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYS 832
LIF+TR+ + P L+ A + ++AT ++ + + IW++S
Sbjct: 808 LIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHSDT---SIVAVVRIWIFS 864
Query: 833 LVTYFPLDILKFGIRYILSGKAWDTLLENK 862
+ + + + ++ + +D L+ K
Sbjct: 865 FGIFCIMGGVYYILQDSV---GFDNLMHGK 891
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 445 bits (1148), Expect = e-142
Identities = 223/1007 (22%), Positives = 378/1007 (37%), Gaps = 181/1007 (17%)
Query: 2 GGDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEE-K 58
GG + LE +K E ++ ++ + E+ ++ + S +GL++ A L GPN L +
Sbjct: 35 GGKRKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPR 94
Query: 59 KESKVLKFLGFMWNPLSWVMEAAAIMAIALA---NGGGRDPDWQDFVGIIVLL---VINS 112
+ +KF + L +M AA + + G + + L+ V+
Sbjct: 95 GTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154
Query: 113 TISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172
+ +E + N A+ + + V+RDG + +A LV GD++ +K GD VPAD R
Sbjct: 155 CFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIR 214
Query: 173 LLEGDPLKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVH 222
+L+ K+D S+LTGES P T+ +P + F + C +G + +V+ TG
Sbjct: 215 ILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDR 274
Query: 223 TFFGKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRK 274
T G+ A L ++ HF ++ +A+ A I+
Sbjct: 275 TIIGRIASLASGVENEKTPIAIEIEHFVDIIAG--------LAILFGATFFIVAMCIGYT 326
Query: 275 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334
+ + + +++ +P + ++V +++ + RL+ + + K + A+E + V+CSD
Sbjct: 327 FLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSD 386
Query: 335 KTGTLTLNKLTV-----DRNLIEVFAKGVEKEHVI--------------LLAARASRTEN 375
KTGTLT N++TV D ++ + L RA+
Sbjct: 387 KTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSG 446
Query: 376 QDAIDAAIVGMLADPKEA------------RAGVRE----VHFLPFNPVDKR--TALTYI 417
QDA+ ++ D E G RE V +PFN +K + T
Sbjct: 447 QDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLE 506
Query: 418 DSDGNWHRA-SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVA 466
D H KGAPE++L C+ E R+ G R LG
Sbjct: 507 DPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFC 566
Query: 467 RQEIPEKTKESPGAPWQ-----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515
+ + EK A GL+ + DPPR + + + G+ V M+
Sbjct: 567 QLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMV 626
Query: 516 TGDQ----LAIGKETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVD 557
TGD AI G P + +D A + +
Sbjct: 627 TGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPS 686
Query: 558 ELIEKADG-----FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612
EL+E FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A+
Sbjct: 687 ELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGI 746
Query: 613 A-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVL 663
A +DAA++A+D++L + + I++ V R IF +K Y I I +
Sbjct: 747 AGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITV 806
Query: 664 GFMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPDSWK 710
L +L I + D IM + R + +
Sbjct: 807 SVPLP-------LGCITILFIELCTDIFPSVSLAYEKAESDIMH-LRPRNPKRDRLVNEP 858
Query: 711 L--KEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------------- 751
L F G + A T F + ++ F G+R
Sbjct: 859 LAAYSYFQIGAIQS--FAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEW 916
Query: 752 ----RTRPDEMMAALYLQVSIISQ-ALIFVTRSRSWSFIER-----PGLLLATAFVIA-Q 800
R ++ + Q A + + ++R S ++ L++A F +
Sbjct: 917 TFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIG 976
Query: 801 LVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
+ N F + W V + L+ + +I K G+R
Sbjct: 977 CFLCYCPGMPNI-F-NFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 442 bits (1140), Expect = e-140
Identities = 209/1008 (20%), Positives = 380/1008 (37%), Gaps = 186/1008 (18%)
Query: 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEE-KK 59
DK L+E+K E S+D ++ ++E+ + GLT+ L GPN L
Sbjct: 31 IDKKRDLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPT 90
Query: 60 ESKVLKFLGFMWNPLSWVMEAAAIMAIAL------ANGGGRDPDWQDFVGIIVLLVINST 113
+ +KF ++ S ++ AI+ + + V + ++++
Sbjct: 91 TPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150
Query: 114 ISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173
S+ +E + + + + V+RDG S +A +V GD++ +K GD +PAD R+
Sbjct: 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRI 210
Query: 174 LEGDPLKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHT 223
+ K+D S+LTGES P T+ NP + F + C +G VV+ TG T
Sbjct: 211 ISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRT 270
Query: 224 FFGKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275
G+ A L ++ HF ++T +AV + I+ + +
Sbjct: 271 VMGRIATLASGLEVGRTPIAIEIEHFIHIITG--------VAVFLGVSFFILSLILGYSW 322
Query: 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335
+ + L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDK
Sbjct: 323 LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDK 382
Query: 336 TGTLTLNKLTV-----DRNLIEVFAKGVEKE--------------HVILLAARASRTENQ 376
TGTLT N++TV D + E + + L RA Q
Sbjct: 383 TGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQ 442
Query: 377 ------------DAIDAAIVGM----LADPKEARAGVREVHFLPFNPVDKR--TALTYID 418
DA ++A++ + R ++ +PFN +K +
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEK 502
Query: 419 SDGNWHRA-SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVAR 467
S + + KGAPE+IL C+ +ED+++ + G R LG
Sbjct: 503 SSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCH 562
Query: 468 QEIPEKT--------KESPGAPWQ---LVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516
+PE + P P VGL+ + DPPR + + + + G+ V M+T
Sbjct: 563 FALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVT 622
Query: 517 GDQ----LAIGKETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVDE 558
GD AI K G P + +D A + L +
Sbjct: 623 GDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEV 682
Query: 559 LIEKADG-----FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613
L + FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ +
Sbjct: 683 LDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIS 742
Query: 614 -TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVLG 664
+D ++ A+D++L + + I++ V R IF +K Y + I+
Sbjct: 743 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN 802
Query: 665 FMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPDSWKL 711
L +L I + D IM + P + KL
Sbjct: 803 VPLP-------LGTVTILCIDLGTDMVPAISLAYEQAESDIMK------RQPRNPKTDKL 849
Query: 712 KEIFATGVVLGSYLAIMTV----VFFWLMRK--------------------TDFFSDAFG 747
+ G I + +F ++ + +D
Sbjct: 850 VNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQ 909
Query: 748 VRSLRTRPDEMMAA--LYLQVSIISQ-ALIFVTRSRSWSFIER----PGLLLATAFVIA- 799
+ R + ++ Q A + + ++R S ++ L+ A
Sbjct: 910 QWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETAL 969
Query: 800 QLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847
++ + + R+ W + YSL+ + ++ +F IR
Sbjct: 970 AAFLSYCPG-TDVAL-RMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIR 1015
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 415 bits (1069), Expect = e-130
Identities = 228/977 (23%), Positives = 373/977 (38%), Gaps = 194/977 (19%)
Query: 23 PIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEA 80
EE S GLT D+ L +G N+L E+ +S + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 81 AAIMAIALA---NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
AA ++ LA G + + I+++L+ N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 138 KVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLL--EGDPLKIDQSALTGESLPV 193
KV R R S Q A +VPGD++ + +GD VPAD R+L + L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 194 TKNP---YDE----------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN---- 236
K+ D +FSG+ G+ +V TGV T GK + +T
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 237 ----QVGHFQKVLT-AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIG--- 288
++ F + L+ I C+ + I PV + G + +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINI---GHFNDPVHGGSWIRGAIYYFKIAVALAV 305
Query: 289 -GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD 347
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N+++V
Sbjct: 306 AAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVC 365
Query: 348 R--------------NLIEVFAKGVEKEHVILLAARASRTENQDAIDA-AIVGMLA---- 388
+ N + E +L + R+ D + A + L
Sbjct: 366 KMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSS 425
Query: 389 --------------DPKEA-------RAGVREVHF------------------------- 402
+ E + V
Sbjct: 426 LDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFT 485
Query: 403 LPFNPVDKRTALTYIDSDGNWHRAS-----KGAPEQILALCNC----------REDVRKK 447
L F+ K ++ + + KGAPE ++ CN V++K
Sbjct: 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 448 VHAVIDKF--AERGLRSLGVARQEIPEKTKESPGAPWQ----------LVGLLPLFDPPR 495
+ +VI ++ LR L +A ++ P K +E VG++ + DPPR
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605
Query: 496 HDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551
+ +I+ + G+ V MITGD +AI + G + + G++
Sbjct: 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIG--IFGENEEVADRAYTGRE----F 659
Query: 552 AALPVDELIEKADG---FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
LP+ E E FA V P HK +IV+ LQ I MTGDGVNDAPALKKA+IGI
Sbjct: 660 DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGI 719
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIR 660
A+ T A++AS++VL + S I++AV RAI+ MK + Y V I +
Sbjct: 720 AMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLT 779
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPD 707
LG P +L + ++ DG IM P +
Sbjct: 780 AALGLPEA-------LIPVQLLWVNLVTDGLPATALGFNPPDLDIM-----DRPPRSPKE 827
Query: 708 SWKLKEIFATGVVLGSYLAIMTV-VFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQV 766
+F + +G Y+ TV W + D GV + +
Sbjct: 828 PLISGWLFFRYMAIGGYVGAATVGAAAWWFM---YAEDGPGVTYHQLTHFMQCTEDHPHF 884
Query: 767 SIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCG--WGW 824
+ + + + + V ++ ++ N S R+ W
Sbjct: 885 EGLDCEIFEAPEPMTMAL---------SVLVTIEMCNALNSLSENQSLMRMPPWVNIWLL 935
Query: 825 AGVIW---LYSLVTYFP 838
+ L+ L+ Y
Sbjct: 936 GSICLSMSLHFLILYVD 952
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 5e-45
Identities = 134/549 (24%), Positives = 219/549 (39%), Gaps = 119/549 (21%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 227
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 228 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 284
L D +V +F + + +I+ I I P+ L+
Sbjct: 315 PPIQRLAD---KVVAYFIPTVLLV------AISAFIYWYFIAHAPLLF-----AFTTLIA 360
Query: 285 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
+L+ P A PT L+V G + ++ G + K A+E + + DKTGTLT
Sbjct: 361 VLVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT 416
Query: 341 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 399
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 417 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 460
Query: 400 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 453
H + +K + G +G + + N R V +V ++
Sbjct: 461 -HGIELGEPEKVEVIA-----G------EGVVADGILVGNKRLMEDFGVAVSNEVELALE 508
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 513
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 509 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 555
Query: 514 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573
MITGD + R L +D +I A V P
Sbjct: 556 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 585
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 586 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 644
Query: 634 ISAVLTSRA 642
++A+ SR
Sbjct: 645 VAAIQLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 3e-44
Identities = 134/555 (24%), Positives = 224/555 (40%), Gaps = 119/555 (21%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 119 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 227
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 228 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 284
L D +V +F + T + +I+ I I P+ L+
Sbjct: 237 PPIQRLAD---KVVAYF--IPTVLL----VAISAFIYWYFIAHAPLLF-----AFTTLIA 282
Query: 285 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
+L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 283 VLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLT 338
Query: 341 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 399
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 339 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 382
Query: 400 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 453
H + +K + +G + + N R V +V ++
Sbjct: 383 -HGIELGEPEKVEVIA-----------GEGVVADGILVGNKRLMEDFGVAVSNEVELALE 430
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 513
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 431 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 477
Query: 514 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573
MITGD + R L +D +I A V P
Sbjct: 478 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 507
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 508 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 566
Query: 634 ISAVLTSRAIFQRMK 648
++A+ SR ++K
Sbjct: 567 VAAIQLSRKTMSKIK 581
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 3e-30
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 71/335 (21%)
Query: 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI-LLAARASRTEN 375
+ A E + + DKTGTLT + V ++ ++ ++ + A+ +R+E+
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSEH 57
Query: 376 QDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIL 435
A AAIV +EA V++ A+ G +
Sbjct: 58 PIA--AAIV------EEAEK-----RGFGLTEVEEFRAIP-----GKGVEGIVN--GRRY 97
Query: 436 ALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493
+ + ++ K ++K ++G + + + ++ G++ L D
Sbjct: 98 MVVSPGYIRELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADR 144
Query: 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 553
R +S E I + +G+ M+TGD + K LG
Sbjct: 145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG---------------------- 182
Query: 554 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613
+D+ A V P K E VK +Q++ M GDGVNDAPAL +AD+GIA+
Sbjct: 183 --LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIAIGAG 233
Query: 614 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
TD A +DIVL + + V SR + +
Sbjct: 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-29
Identities = 33/166 (19%), Positives = 72/166 (43%), Gaps = 30/166 (18%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+ + + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+ E + + PE K I+++L++ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 4e-29
Identities = 87/349 (24%), Positives = 139/349 (39%), Gaps = 87/349 (24%)
Query: 311 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 370
+ G + K A+E + + DKTGTLT K V ++ ++ ++ LAA A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAIA 70
Query: 371 -SRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
R+E+ A AIV K+A H + +K + G +G
Sbjct: 71 ERRSEHPIA--EAIV------KKALE-----HGIELGEPEKVEVIA-----G------EG 106
Query: 430 APEQILALCNCR------EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ 483
+ + N R V +V ++K ++ VAR +
Sbjct: 107 VVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNG-------------R 153
Query: 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPS 539
+ G++ + D + + ++ +G+ V MITGD AI +E
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN------------ 201
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
+D +I A V P K E VK+LQ K + GDG+NDAP
Sbjct: 202 ----------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAP 238
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
AL +AD+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 239 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 6e-25
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+ V LL + DP + + ETI G+ + M+TGD + LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+ +++ A + PE K IV L+++ I M GDGVNDAPAL
Sbjct: 593 -------------IKKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649
KADIGIA+ TD A ++ + L L I A S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 9e-18
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 123 GNAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
G+A AL+ L P++ ++ DG E + GD++ ++ G+ +P D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD----STN 236
+D+S +TGE +PV K +V + + G + G T + +V S
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRA 330
Query: 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP- 295
+ ++ F I V +++ I+ G+ + +LI IA P
Sbjct: 331 PIQRLADTVSGW--FVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLI----IACPC 384
Query: 296 -----TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNL 350
T +S+ + +G + +Q G + K A+E M ++ L DKTGTLT +
Sbjct: 385 ALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKL---- 438
Query: 351 IEVFAKGVEKEHVILLAA 368
+ +++ + LAA
Sbjct: 439 TRIVTDDFVEDNALALAA 456
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 75.2 bits (186), Expect = 2e-16
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 125 AAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQ 183
A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+ +D+
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 184 SALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
S ++GE +PV K+ DEVF + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-15
Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 355 AKGVEKEHVILLAARASRTENQ--DAIDAAIV--GMLADPKEARAGVREVHFLPFNPVDK 410
G E V+ A S + + +D A++ + + +++ +PF+ +
Sbjct: 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR 69
Query: 411 RTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGL 460
R ++ ++ + KGA ++IL +C+ + + +K+ V D +GL
Sbjct: 70 RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 461 RSLGVARQEIPEKTKE-SPGAPWQLV--GLLPLFDPPRH 496
R + VA + +P + + L+ G + D H
Sbjct: 130 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 6e-15
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVP------GDVISIKLGDIVPADARL 173
A A L+ +L ++ + + V GD+I + G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 174 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
+EG +D+S +TGE++PV K P V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 3e-07
Identities = 104/708 (14%), Positives = 202/708 (28%), Gaps = 226/708 (31%)
Query: 24 IEEVFEQ-----LKCS------REGLTSDEGAHRLHVFGPNK----------LEEKKESK 62
I VFE C + L+ +E H + + L K+E
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS--KDAVSGTLRLFWTLLSKQEEM 78
Query: 63 VLKFLGFMWNP-LSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121
V KF+ + ++M I R P T +IE+
Sbjct: 79 VQKFVEEVLRINYKFLMS-----PIKTEQ---RQPS-------------MMTRMYIEQ-- 115
Query: 122 AGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDV--------ISIKLGDIVPADARL 173
RD ++ D + +V + L ++ PA L
Sbjct: 116 -------------------RDRLYN--DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 174 LEGDPLKIDQSALTGESL---PVTKNPYDEVF--SGSTCKQGEIEAVVIATGVHTFFGKA 228
++G L ++ + + V ++F + C E ++ ++
Sbjct: 155 IDGV-LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 229 AHLVD-STNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLI 287
D S+N + + ++ + Y + LLVLL
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRL------------------LKSKPYENC---LLVLL- 251
Query: 288 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK---- 343
+ + + L +T R + D L + T ++L+
Sbjct: 252 ---NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATTTHISLDHHSMT 297
Query: 344 LTVDRNLIEVFAKGVEKE--------------HVILLAAR----ASRTEN-----QDAID 380
LT D + K ++ + ++A + +N D +
Sbjct: 298 LTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356
Query: 381 AAIVGMLA--DPKEARAGVREVHFLPFN--PVDKRTALTYIDSDGNWHRASKGAPEQILA 436
I L +P E R F + P +I P +L+
Sbjct: 357 TIIESSLNVLEPAEYRK-----MFDRLSVFPPS-----AHI-------------PTILLS 393
Query: 437 L--CNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494
L + + V V++K + L V +Q P+++ S + +
Sbjct: 394 LIWFDVIKSD---VMVVVNKLHKYSL----VEKQ--PKESTIS------IPSIYLELKVK 438
Query: 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA- 553
+ R + D I K + S L+ D +
Sbjct: 439 LENEYALHRSIV-----------DHYNIPKT-----------FDSDDLIPPYLDQYFYSH 476
Query: 554 ----LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609
L E E+ F VF + ++ + ++++ +G +N LK I
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRF-LEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC 535
Query: 610 VADATDAARSASDIV--LTEPGLSVIIS--AVLTSRAIFQRMKNYTIY 653
D R + I+ L + ++I S L A+ ++ I+
Sbjct: 536 DNDPKY-ERLVNAILDFLPKIEENLICSKYTDLLRIALMA--EDEAIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 5e-07
Identities = 78/497 (15%), Positives = 144/497 (28%), Gaps = 140/497 (28%)
Query: 445 RKKVHAVIDKFA--------ERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRH 496
+ + D F + +S+ ++++EI + G L LF
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSI-LSKEEIDHIIMS----KDAVSGTLRLFWTLLS 73
Query: 497 DSAETIRRALN--LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554
E +++ + L +N K + I E R+ M T MY
Sbjct: 74 KQEEMVQKFVEEVLRINYKFLMS---PIKTEQ-RQPSMMTRMYIEQ-------------- 115
Query: 555 PVDELIEKADGFAGVF---PEHKYEIVKRLQERKH-----ICGMTGDG--------VNDA 598
D L FA + ++ + L E + I G+ G G
Sbjct: 116 -RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174
Query: 599 PALKKADIGI---AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655
K D I + + S ++ L I TSR+ N +
Sbjct: 175 KVQCKMDFKIFWLNLKN----CNSPETVLEMLQKLLYQIDPNWTSRS--DHSSNIKLRIH 228
Query: 656 SITIRIVLGFM-------LIAL-------IWK-FDFS-PFMVL-----IIAILNDGTIMT 694
SI + L+ L W F+ S ++ + L+ T
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 695 ISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWL-MRKTDFFSDAFGVRSLRT 753
IS D + PD ++K + +L R D L
Sbjct: 289 ISLDHHSMTLTPD--EVKSLLLK----------------YLDCRPQD----------L-- 318
Query: 754 RPDEMMAALYLQVSIISQALI-FVTRSRSWSFIERPGLLLATAFVIAQLV-ATFIAVYAN 811
P E++ ++SII++++ + +W + L + L A + ++
Sbjct: 319 -PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF-- 375
Query: 812 WSFA------RIEGCGWGWAGVI---WLYSLVTYFPLDILKFGIRYILSGKAW------- 855
+ I ++ W ++ + ++ +Y L K
Sbjct: 376 DRLSVFPPSAHIP------TILLSLIWFD-VIKSDVMVVVNKLHKYSLVEKQPKESTISI 428
Query: 856 -DTLLENKVNCIGKTYL 871
LE KV + L
Sbjct: 429 PSIYLELKVKLENEYAL 445
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 4e-06
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K V ++ + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 628 PG 629
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+ K +K+ E + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 628 PG 629
PG
Sbjct: 145 PG 146
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+K L E+ I GD + D P ++K + +AVADA +D V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 628 PG 629
G
Sbjct: 160 AG 161
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K + L I GD +NDA LK+ I A A R S I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 628 PG 629
G
Sbjct: 138 RG 139
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K EI ++++E+ + G GD V D +KK +AV +A + R + +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 628 PG 629
G
Sbjct: 143 NG 144
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K + L++ + GD + D P +++ +G+AV++A +D
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 628 PG 629
G
Sbjct: 153 TG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K L GD + D P + + + +AVADA + V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 628 PG 629
G
Sbjct: 183 KG 184
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 28/128 (21%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
I+ + GV +I+G + AI + + LG+ +++ DK + L D+L+
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGI-EHLFQGRE----DK---LVVL--DKLLA 104
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 621
+ + E GD + D P +++ +G+AVA+A R +
Sbjct: 105 E----LQLGYEQ--------------VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHA 146
Query: 622 DIVLTEPG 629
+ G
Sbjct: 147 HGITRAQG 154
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 5e-05
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
I+ ++ + V +++G I + LG+ + +K A +L++
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGI-KLFFLGKL----EK---ETAC--FDLMK 93
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 621
+ AGV E GD D PA AVADA ++A
Sbjct: 94 Q----AGVTAEQ--------------TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 135
Query: 622 DIVLTEPG 629
D VL+ G
Sbjct: 136 DHVLSTHG 143
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 36/132 (27%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
++ +N G+ + +ITG + + R+ AL + +
Sbjct: 61 VKALMNAGIEIAIITGRR---SQIVENRM---------------------KALGISLI-- 94
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 617
+ G + K + + ++ I G GD + D P ++K + + VAD
Sbjct: 95 ----YQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLL 148
Query: 618 RSASDIVLTEPG 629
++ V G
Sbjct: 149 AQRANYVTHIKG 160
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 31/196 (15%), Positives = 54/196 (27%), Gaps = 25/196 (12%)
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSL-GVARQEIPEK 473
T +D + AP + +AL ++ V K ++ + L ++EI
Sbjct: 16 TITMNDNIINIMKTFAPPEWMAL---KDGVLSKTLSIKEGVGRM-FGLLPSSLKEEITSF 71
Query: 474 TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533
E R E + + +I+G +
Sbjct: 72 VLEDA--------------KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK 117
Query: 534 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593
+Y + + D G K ++ L E M GD
Sbjct: 118 DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGD 171
Query: 594 GVNDAPALKKADIGIA 609
V D A K +D+ A
Sbjct: 172 SVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 625 LTEPGLSVII 634
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ K EI++++ + + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 625 LTEPGLSVII 634
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
V + K +I+ L ++ + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 625 LTEPGLSVII 634
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ +K + + L R +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 625 LTEPGLSVII 634
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 883 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 5e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-27 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 7e-04 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 4e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-13 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 2e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-10 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 2e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 5e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 3e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 | |
| d2a29a1 | 136 | d.220.1.1 (A:316-451) Potassium-transporting ATPas | 0.004 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 111 bits (279), Expect = 5e-29
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM-GTNMYPSSS 541
DPPR + +I+ + G+ V MITGD RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 542 LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601
+ + E +A FA V P HK +IV+ LQ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637
KKA+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 116 bits (292), Expect = 1e-28
Identities = 30/346 (8%), Positives = 80/346 (23%), Gaps = 37/346 (10%)
Query: 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV---DRNLIEVFAKG---------VEKEH 362
+ + + + + + + + ++ I K +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 363 VILLAARASRTENQD--AIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
I L + + + A + + + + L + + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
+ + A + + + + + A+ + + + + K+
Sbjct: 146 NIYAALEEFATTE----LHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 481 PWQLVGLLPLFDP--PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 538
++ G + P + + G + + TG LG+
Sbjct: 202 TFKT-GYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 539 SSSLLGQD--------KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
D A P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 591 TGDGVNDAPALKKADI-GIAVA-------DATDAARSASDIVLTEP 628
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 114 bits (286), Expect = 2e-27
Identities = 52/327 (15%), Positives = 100/327 (30%), Gaps = 93/327 (28%)
Query: 22 IPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVME 79
EE S GLT D+ L +G N+L E+ +S + + L ++
Sbjct: 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 66
Query: 80 AAAIMAIAL---ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPK 136
AA ++ L G + + I+++L+ N+ + +E NA NA AL
Sbjct: 67 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA 126
Query: 137 TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
T+ D P +L E GE L
Sbjct: 127 TE-------------------------QDKTPLQQKLDE-----------FGEQL----- 145
Query: 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSI 256
++ +++ G V + + I
Sbjct: 146 -------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK---------I 183
Query: 257 AVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316
AV L + IP +P V++ +A+G+ R++++ AI
Sbjct: 184 AVA-------------------------LAVAAIPEGLPAVITTCLALGTRRMAKKNAIV 218
Query: 317 KRMTAIEEMAGMDVLCSDKTGTLTLNK 343
+ + ++E + + ++
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 40.8 bits (95), Expect = 7e-04
Identities = 44/257 (17%), Positives = 77/257 (29%), Gaps = 38/257 (14%)
Query: 631 SVIISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLIALIWKFDFSPFMVLIIAILND 689
+ S RAI+ MK + Y +S + +V F+ AL P +L + ++ D
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 278
Query: 690 GT-------------IMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFF--- 733
G IM R P W A G +G+ +F
Sbjct: 279 GLPATALGFNPPDLDIMDR-PPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYA 337
Query: 734 ------------WLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRS 781
M+ T+ G+ E M + I + S +
Sbjct: 338 EDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN 397
Query: 782 WSFIER-----PGLLLATAFVIA-QLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVT 835
S + LL + ++ + ++ +++ ++ SL
Sbjct: 398 QSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLP--MIFKLKALDLTQWLMVLKISLPV 455
Query: 836 YFPLDILKFGIRYILSG 852
+ILKF R L G
Sbjct: 456 IGLDEILKFIARNYLEG 472
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 85.1 bits (210), Expect = 4e-20
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
D + + ++ +G+ V MITGD + R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
P K E VK+LQ K + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQ-AKEVVAFVGDGINDAPALA 99
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.5 bits (198), Expect = 1e-18
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 138 KVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLLEGDP--LKIDQSALTGESLPV 193
KV R R S Q A +VPGD++ + +GD VPAD R+L L++DQS LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 194 TKNP-------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232
K+ + +FSG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 68.0 bits (165), Expect = 2e-13
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 27/148 (18%)
Query: 377 DAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKR--TALTYIDSDGNWHRASKGA 430
DA ++A++ + ++ R +V + FN +K + D+ + KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 431 PEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------ 474
PE+IL C+ ++++ + G R LG + +P
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 475 -----KESPGAPWQLVGLLPLFDPPRHD 497
P VGL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.5 bits (143), Expect = 2e-10
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 25/190 (13%)
Query: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI 364
G + + + + + E+A + LC+D + K G E +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETK-------GVYEKVGEATETAL 85
Query: 365 L-LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNW 423
L + + + + + A R +++ L F+ K ++ + +
Sbjct: 86 TTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR 145
Query: 424 HR-----ASKGAPEQILALCNCR----------EDVRKKVHAVIDKF--AERGLRSLGVA 466
KGAPE ++ CN V++K+ +VI ++ LR L +A
Sbjct: 146 AAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALA 205
Query: 467 RQEIPEKTKE 476
++ P K +E
Sbjct: 206 TRDTPPKREE 215
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 58.5 bits (140), Expect = 4e-10
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 6/157 (3%)
Query: 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIA 552
R E + + +I+G + +Y + + D
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDY----- 129
Query: 553 ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612
+ +D + K ++ L E M GD V D A K +D+ A
Sbjct: 130 -IHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (120), Expect = 1e-07
Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 13/151 (8%)
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI--CGMTGDGVNDA 598
L E + K +++K L+E+ H M GDG D
Sbjct: 130 RLKFYFNG---------EYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 599 PALKKADIGIAVA--DATDAARSASDIVLTE 627
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 49.7 bits (118), Expect = 2e-07
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
++++K+ GD D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.7 bits (112), Expect = 2e-06
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 630 LSVIISAV 637
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.0 bits (108), Expect = 5e-06
Identities = 11/58 (18%), Positives = 17/58 (29%)
Query: 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+ K + V + + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 33/193 (17%), Positives = 56/193 (29%), Gaps = 55/193 (28%)
Query: 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL 559
E+IR A G+ V +++G+ + + LG+ ++ + + D D SI +E
Sbjct: 27 ESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEG 86
Query: 560 IEK---------------------ADGFAGVFPEHKYEIVKRLQERKHI----------- 587
K A + PE + K + R +
Sbjct: 87 TNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLM 146
Query: 588 -----------------------CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ GD ND P + A+ATD ++ SD V
Sbjct: 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 206
Query: 625 LTEPGLSVIISAV 637
I
Sbjct: 207 SDYSYGEEIGQIF 219
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 44.8 bits (104), Expect = 1e-05
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 625
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 626 TEPGLSVIISAV 637
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.0 bits (105), Expect = 2e-05
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K + + + I GDG ND L+ A IG+A+ A + ++A+D V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIV 624
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIVLT---EPGLSVIISAVLTSRAIF 644
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.2 bits (90), Expect = 0.001
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ + +R+ +K + GD ND ++A + +A+ +A + + ASDIV
Sbjct: 193 KALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Score = 36.2 bits (83), Expect = 0.004
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 17/140 (12%)
Query: 355 AKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414
A+GV+++ + A AS + +IV + R + F P ++ +
Sbjct: 10 AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 68
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHAVIDKFAERGLRSLGVARQEIPEK 473
+ I+ D KG+ + I V +D+ A +G L V
Sbjct: 69 SGINIDN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS---- 122
Query: 474 TKESPGAPWQLVGLLPLFDP 493
+++G++ L D
Sbjct: 123 ---------RVLGVIALKDI 133
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 883 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.95 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.85 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.78 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.75 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.4 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.19 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.15 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.07 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.03 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.98 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.92 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.86 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.83 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.82 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.76 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.71 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.65 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.62 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.57 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.57 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.47 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.8 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.71 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.53 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.37 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.28 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.26 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 96.92 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.66 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.25 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.07 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.04 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 95.92 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.9 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 94.97 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.75 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.74 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 94.56 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.5 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.47 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.44 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 94.33 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.74 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 93.02 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 92.16 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 91.9 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 91.73 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 91.53 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 90.75 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 90.27 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 89.37 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 88.61 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.4e-38 Score=313.91 Aligned_cols=431 Identities=18% Similarity=0.177 Sum_probs=296.5
Q ss_pred CCCCCCHHHHHHHCCCC-CCCCCHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---C
Q ss_conf 43357988899880999-8999999999998531998347656-64799999999848999999999999999659---9
Q 002765 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG---G 92 (883)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~~~~~~~~~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~---~ 92 (883)
++|..+.||++++|+|| ++|||++|+++|+++||+|++++++ .+.|..|+++|++|+.++++++++++++++.. .
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred CHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 73449999999996969355969999999998049987999999999999999983899999999999999999873265
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCEECCCEE
Q ss_conf 99986245999999999999999999988999999973058990899989949996368879995899808984204358
Q 002765 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (883)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~I~~~~lv~GDii~i~~G~~iPaD~~ 172 (883)
.....|.+++.|++++++++.++++||+|++++++++.++.++. ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred CCCHHHHHHHHHHHEEEEEEEEEEEEECHHHHHHHHHHHHCCCC-------------------------CCCCCCHHHHH
T ss_conf 32023767666311244652577677501777888775212223-------------------------56658648889
Q ss_pred EEECCCEEEEECCCCCCCCCEECCCCCCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 97408759973054589962103899976666246306179999871331254304544103788890799999998999
Q 002765 173 LLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFC 252 (883)
Q Consensus 173 il~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~~~~~ 252 (883)
+.+ +||+.+ .+.+.+..+|..|.+|++...+...
T Consensus 138 l~~-----------~g~~i~------------------~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 171 (472)
T d1wpga4 138 LDE-----------FGEQLS------------------KVISLICVAVWLINIGHFNDPVHGG----------------- 171 (472)
T ss_dssp HHH-----------HHHHHH------------------HHHHHHHHHHHHHCCTTSSSCCSSS-----------------
T ss_pred HHH-----------HHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHH-----------------
T ss_conf 999-----------999998------------------9999787999999999999998610-----------------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEE
Q ss_conf 99999989999876543254435767999999998613774047899999999998420684103661544117806999
Q 002765 253 ICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 332 (883)
Q Consensus 253 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~ 332 (883)
.....+.+.+..++++.++++||+||++++++++.+++||+|+|++||+++++|++|+..+.|
T Consensus 172 -----------------~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~ 234 (472)
T d1wpga4 172 -----------------SWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNN 234 (472)
T ss_dssp -----------------CSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHH
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf -----------------468999999999999999867516899999999999999986366066589999999998888
Q ss_pred ECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCCE
Q ss_conf 54678754593257555301003587709999999986245677838899998607915551294078852488768617
Q 002765 333 SDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRT 412 (883)
Q Consensus 333 ~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~~f~s~~k~~ 412 (883)
+|||-..|
T Consensus 235 ~~k~i~~~------------------------------------------------------------------------ 242 (472)
T d1wpga4 235 MKQFIRYL------------------------------------------------------------------------ 242 (472)
T ss_dssp HHHHHHHH------------------------------------------------------------------------
T ss_pred HHHHHHHH------------------------------------------------------------------------
T ss_conf 67764013------------------------------------------------------------------------
Q ss_pred EEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 99999589969999839768899860278468999999999997706827799830059878889999936988612479
Q 002765 413 ALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFD 492 (883)
Q Consensus 413 svv~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D 492 (883)
T Consensus 243 -------------------------------------------------------------------------------- 242 (472)
T d1wpga4 243 -------------------------------------------------------------------------------- 242 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
T Consensus 243 -------------------------------------------------------------------------------- 242 (472)
T d1wpga4 243 -------------------------------------------------------------------------------- 242 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 09999999977699999995995697878629942990574088984049886169922799999999999999999999
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~ 652 (883)
T Consensus 243 -------------------------------------------------------------------------------- 242 (472)
T d1wpga4 243 -------------------------------------------------------------------------------- 242 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHH-HHHHHHHCCCCCHHHHHHHHHHHHHH-HHCCCCCCCCCC-----CCC--CCHHHHHHHHHHHHHHH
Q ss_conf 9999989999999-99999620685099999999952100-212346878999-----999--92327889999999899
Q 002765 653 YAVSITIRIVLGF-MLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGS 723 (883)
Q Consensus 653 ~~~~~ni~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~g~ 723 (883)
++.|+..+... ....+..+.|++|+|++|+|+++|.+ +++++.|++++. ||+ +....+.++...+..|.
T Consensus 243 --l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~ 320 (472)
T d1wpga4 243 --ISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGG 320 (472)
T ss_dssp --HHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf --343699999999999739986423799999998758889999963888544304999999756649999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCC--CCC-----------------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-
Q ss_conf 99999999999998305556--644-----------------6655678824589999999999999984120358987-
Q 002765 724 YLAIMTVVFFWLMRKTDFFS--DAF-----------------GVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWS- 783 (883)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~~~~~t~~f~~l~~~~~~~~~~~r~~~~~- 783 (883)
..++.++..+++.......+ ..+ +.........+.+|++|..+++++.++.++.|+.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~~s~ 400 (472)
T d1wpga4 321 YVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSL 400 (472)
T ss_dssp HHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCT
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 99999999999999972379987678776776406776544652034556767899999999999999999982577542
Q ss_pred CCCC--CHHHHHHHHHHHHHHHHHHHHHHC-C-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 6558--237899999999999999998421-3-333346420358999999999999999999998787606
Q 002765 784 FIER--PGLLLATAFVIAQLVATFIAVYAN-W-SFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILS 851 (883)
Q Consensus 784 ~~~~--~~~~l~~~~~~~~~~~~~~~~~~~-~-~~~~~~~i~~~~~lii~l~~v~~~~~~el~K~~~r~~~~ 851 (883)
|... .|.+++.++++.+++..++ .|.+ . .++.+.+++|.+|++++.++++.++++|+.|++.|++..
T Consensus 401 ~~~~~~~N~~l~~av~i~~~l~~~i-~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R~~~~ 471 (472)
T d1wpga4 401 MRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYLE 471 (472)
T ss_dssp TTSCGGGCHHHHHHHHHHHHHHHHH-HHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 2257631699999999999999999-9866778888065889999999999999999999999998310889
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=1.1e-26 Score=224.59 Aligned_cols=149 Identities=38% Similarity=0.518 Sum_probs=133.7
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHCCEEEEEC
Q ss_conf 9999786999999996799199994796489999999909998988887-644763001259200899965067399809
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS-SLLGQDKDASIAALPVDELIEKADGFAGVF 570 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 570 (883)
||||++++++|+.||++||+++|+|||+..+|.++|+++||..+..... ....+.+.......++.+..++..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 88965399999999988498999899997999999998499887641110003463000012788766553223000001
Q ss_pred CCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHH
Q ss_conf 0009999999977699999995995697878629942990574088984049886169922799999999
Q 002765 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (883)
Q Consensus 571 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~g 640 (883)
|+||..+++.+|+.|++|+|+|||.||+|||++|||||++++++++++++||+++.+++|+.++.+|+||
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCHHHHHHHHHCC
T ss_conf 1478889999874045404770677888999859888886551199998489999159989999999749
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=2e-22 Score=190.83 Aligned_cols=125 Identities=34% Similarity=0.502 Sum_probs=117.2
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 69886124799997869999999967991999947964899999999099989888876447630012592008999650
Q 002765 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (883)
Q Consensus 483 ~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (883)
+..+.++++|++|++++++|+.|+++|++++|+|||+..++.++|+++||..
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------- 62 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------- 62 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------------------------
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHH----------------------------
T ss_conf 1479973688998119999999998599799975863355567776542221----------------------------
Q ss_pred CCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 6739980900099999999776999999959956978786299429905740889840498861699227999999
Q 002765 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 563 ~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
+|++++|++|..+++.+|.. +.|+|+|||.||+|||++||+||+|+++++.++++||++++++++++++.+|+
T Consensus 63 --v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 --VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp --EECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred --HCCCCCHHHHHHHHHHHHCC-CEEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHC
T ss_conf --01211026799999999859-97899967877578897478624537658789984999997899889999859
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.85 E-value=7.9e-27 Score=225.58 Aligned_cols=312 Identities=10% Similarity=-0.024 Sum_probs=208.2
Q ss_pred CHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEC-----CCCCCCHH-HHHHHHHHH----CCCCCCCHHHHHHHHHCC
Q ss_conf 61544117806999546787545932575553010-----03587709-999999986----245677838899998607
Q 002765 319 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV-----FAKGVEKE-HVILLAARA----SRTENQDAIDAAIVGMLA 388 (883)
Q Consensus 319 ~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~-----~~~~~~~~-~~l~~~~~~----~~~~~~~~~~~al~~~~~ 388 (883)
..+.|.||..+++|+|||||+|+|+|.+..+..+. ...+...+ +++...+.+ .....+++...+++....
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDE 109 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSS
T ss_pred HHCHHHCCCCEEEECCCCCCHHHHHHEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 61201125640453376551004331113305324667666268880699999999999998774348985778987775
Q ss_pred CHH----HHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 915----5512940788524887686179999958996999983976889986027846899999999999770682779
Q 002765 389 DPK----EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 464 (883)
Q Consensus 389 ~~~----~~~~~~~~l~~~~f~s~~k~~svv~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 464 (883)
... ..+..+.....+||++.+|+|++.....++.+..+.+|+++.+ ...+.....+...+..++.+|+|+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~~~~~~~~~~a~~~~r~l~ 185 (380)
T d1qyia_ 110 PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL----HVSDATLFSLKGALWTLAQEVYQEWY 185 (380)
T ss_dssp CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHT----TCSCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHC----CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 43640899987536555677514888876532455314475552137652----87588899998689999999999987
Q ss_pred EEEECCCCCCCCCCCCCCEEEEEECCCCCCCC--CHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 98300598788899999369886124799997--8699999999679919999479648999999990999898888764
Q 002765 465 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRH--DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542 (883)
Q Consensus 465 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~--~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~ 542 (883)
+|++..+..+.. ...+....|++..++++|| +++++++.|+++|++++|+|||+..++..+++++|+.........+
T Consensus 186 ~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~ 264 (380)
T d1qyia_ 186 LGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA 264 (380)
T ss_dssp HHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEE
T ss_pred HHHHCCCCCCCC-CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEE
T ss_conf 722022334553-3156675423013565334363999999999879959998899799999999981995347850587
Q ss_pred CCCCCC--------CCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCC---EEEEEC
Q ss_conf 476300--------125920089996506739980900099999999776999999959956978786299---429905
Q 002765 543 LGQDKD--------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVA 611 (883)
Q Consensus 543 ~~~~~~--------~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Ad---vgIa~~ 611 (883)
.+.+.. ......+--........+++++|++|..+++.++..++.|+|+|||.||++|.+.|| |||+||
T Consensus 265 ~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 265 TASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp CHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred ECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECC
T ss_conf 44133311220331102369986999999998088778899999973899886999889989999999879988999458
Q ss_pred -CCCHHHHH----CCCEEECCCCCHHHHHHH
Q ss_conf -74088984----049886169922799999
Q 002765 612 -DATDAARS----ASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 612 -~~~~~a~~----aad~vl~~~~~~~i~~~i 637 (883)
.+++..++ .||+++ +++..+..++
T Consensus 345 ~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 345 LKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCCCCHHHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 8886437789767999998--8999999999
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.78 E-value=6.6e-19 Score=162.93 Aligned_cols=98 Identities=40% Similarity=0.598 Sum_probs=88.6
Q ss_pred CEEEEEECCEE--EEEECCCCCCCCEEEEECCCEECCCEEEEE--CCCEEEEECCCCCCCCCEECCCC------------
Q ss_conf 90899989949--996368879995899808984204358974--08759973054589962103899------------
Q 002765 135 PKTKVLRDGRW--SEQDASILVPGDVISIKLGDIVPADARLLE--GDPLKIDQSALTGESLPVTKNPY------------ 198 (883)
Q Consensus 135 ~~~~v~r~g~~--~~I~~~~lv~GDii~i~~G~~iPaD~~il~--g~~~~Vdes~LTGEs~pv~K~~~------------ 198 (883)
+.++|+|+|++ ++|+++||+|||+|.+++||+|||||++++ +..+.||||+|||||.|+.|.++
T Consensus 1 e~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~ 80 (115)
T d1wpga1 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDK 80 (115)
T ss_dssp SEEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGC
T ss_pred CCEEEEECCCCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf 92699999984599986999889989999999999515699996126268987200034689874136622654344333
Q ss_pred -CCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHH
Q ss_conf -9766662463061799998713312543045441
Q 002765 199 -DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232 (883)
Q Consensus 199 -~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 232 (883)
+.+|+||.+.+|+++++|++||.+|.+||+.+++
T Consensus 81 ~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 81 KNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred CCEEEECCEEEEEEEEEEEEEECCCCHHHHHHHHC
T ss_conf 34477416898456999999996003889999759
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.75 E-value=8.6e-17 Score=146.18 Aligned_cols=123 Identities=22% Similarity=0.341 Sum_probs=105.8
Q ss_pred CCCHHHHHHHHHCC----CHHHHHCCCEEEEEECCCCCCCCEEEEEECC--CCCEEEEECCCHHHHHHHCC---------
Q ss_conf 77838899998607----9155512940788524887686179999958--99699998397688998602---------
Q 002765 375 NQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS--DGNWHRASKGAPEQILALCN--------- 439 (883)
Q Consensus 375 ~~~~~~~al~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~svv~~~~--~g~~~~~~kGa~e~il~~~~--------- 439 (883)
.++|.|.|++.++. +....+..++++..+||+|.+|+|+++++.. ++.+.+|+|||||.|+++|+
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHEEECCCEE
T ss_conf 66859999999999959899999863828646855788877899997267887434785278899998634353489530
Q ss_pred -CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC-----------CCCCCCCCEEEEEECCCCCCCCC
Q ss_conf -78468999999999997706827799830059878-----------88999993698861247999978
Q 002765 440 -CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-----------KESPGAPWQLVGLLPLFDPPRHD 497 (883)
Q Consensus 440 -~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG~i~~~D~lr~~ 497 (883)
.++..++.+.+.+++|+.+|+|||++||++++..+ .+..|.+|+|+|++++.||||++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred ECHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCC
T ss_conf 0238899999999999740876899999986583225554545701454221798998999988089899
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.40 E-value=1.9e-13 Score=119.82 Aligned_cols=115 Identities=22% Similarity=0.352 Sum_probs=91.4
Q ss_pred CCHHHHHHHHHCCCH--------------------HHHHCCCEEEEEECCCCCCCCEEEEEECCCC-----CEEEEECCC
Q ss_conf 783889999860791--------------------5551294078852488768617999995899-----699998397
Q 002765 376 QDAIDAAIVGMLADP--------------------KEARAGVREVHFLPFNPVDKRTALTYIDSDG-----NWHRASKGA 430 (883)
Q Consensus 376 ~~~~~~al~~~~~~~--------------------~~~~~~~~~l~~~~f~s~~k~~svv~~~~~g-----~~~~~~kGa 430 (883)
++|.+.|++.++... ...+..++++..+||+|.||||+++++..++ .+.+|+|||
T Consensus 78 G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGA 157 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 157 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHCCCHHHHHHHCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECC
T ss_conf 89980799999999399757863243033320111455653707888600656627899987489986663159998487
Q ss_pred HHHHHHHCCC----------CHHHHHHHHHHHHHH--HHCCCEEEEEEEECCCCCCC----------CCCCCCCEEEEEE
Q ss_conf 6889986027----------846899999999999--77068277998300598788----------8999993698861
Q 002765 431 PEQILALCNC----------REDVRKKVHAVIDKF--AERGLRSLGVARQEIPEKTK----------ESPGAPWQLVGLL 488 (883)
Q Consensus 431 ~e~il~~~~~----------~~~~~~~~~~~~~~~--~~~G~r~l~~a~~~~~~~~~----------~~~e~~l~~lG~i 488 (883)
||.|+++|+. +++.++.+.+.++++ +++|+|||++|||+++.... +..|++|+|+|++
T Consensus 158 pe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlv 237 (239)
T d1wpga3 158 PEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVV 237 (239)
T ss_dssp HHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEE
T ss_pred HHHHHHHCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEE
T ss_conf 49999736234439926309999999999999998675378889999999878440113323416688761799999998
Q ss_pred CC
Q ss_conf 24
Q 002765 489 PL 490 (883)
Q Consensus 489 ~~ 490 (883)
++
T Consensus 238 gi 239 (239)
T d1wpga3 238 GM 239 (239)
T ss_dssp EE
T ss_pred CC
T ss_conf 79
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.19 E-value=3.3e-10 Score=94.14 Aligned_cols=74 Identities=22% Similarity=0.092 Sum_probs=62.4
Q ss_pred EECCCCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHHH
Q ss_conf 80900099999999776----999999959956978786299429905740889840498861699227999999999
Q 002765 568 GVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 641 (883)
Q Consensus 568 r~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gR 641 (883)
......|...++.+.+. .+.|+++|||.||++|++.|++||+|+++.+.+|++||+++..++.+++.+++++..
T Consensus 147 ~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 147 KKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp ECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHCCCCCCCCCCHHHEEEEECCCCHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCCCHHHHHHHHHH
T ss_conf 407767613320112110013324256626730799999789079988987999985799989998478999999999
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.15 E-value=1.5e-09 Score=88.92 Aligned_cols=69 Identities=26% Similarity=0.156 Sum_probs=60.3
Q ss_pred CCCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 00099999999776----9999999599569787862994299057408898404988616992279999999
Q 002765 571 PEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 571 p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
..+|...++.+.+. ...|+++|||.||.+|++.|++||||+++.+.+++.||+++..++..++.+++++
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 6522789998766510023022564488435999997790899889759999849999898984889999998
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.07 E-value=7.2e-10 Score=91.42 Aligned_cols=74 Identities=22% Similarity=0.248 Sum_probs=64.0
Q ss_pred EEEECCC--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 9980900--099999999776----9999999599569787862994299057408898404988616992279999999
Q 002765 566 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 566 ~~r~~p~--~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
+..++|. .|...++.+.+. .+.|+++|||.||.+||+.|+.|+||+||++.+++.||+++..++-+++.+++++
T Consensus 204 ~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 204 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEECCCCCCCHHHHHHHH
T ss_conf 89995554023668988776505572049999297888999984891899689989999858988278875589999998
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=4.6e-10 Score=92.98 Aligned_cols=74 Identities=22% Similarity=0.238 Sum_probs=63.1
Q ss_pred EEEECCC--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 9980900--099999999776----9999999599569787862994299057408898404988616992279999999
Q 002765 566 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 566 ~~r~~p~--~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
+...+|. +|...++.+.+. ...++++|||.||.+||+.|+.|++|+|+.+..|+.|++++..++-.++.+++++
T Consensus 188 ~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~ 267 (271)
T d1rkqa_ 188 FLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEK 267 (271)
T ss_dssp EEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCEEHHHCCCCHHCEEEEECCHHHHHHHHHCCCEEEECCCCHHHHHHCCEECCCCCCCHHHHHHHH
T ss_conf 68852788876542000011001142017999186767999985891899679879999858988388985839999999
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.98 E-value=7e-10 Score=91.54 Aligned_cols=74 Identities=22% Similarity=0.272 Sum_probs=63.7
Q ss_pred EEEECCC--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 9980900--099999999776----9999999599569787862994299057408898404988616992279999999
Q 002765 566 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 566 ~~r~~p~--~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
+..++|. +|...++.+.+. .+.|.++|||.||.+||+.|+.|++|+|+.+.+|+.|++++.+++-+++..+++.
T Consensus 181 ~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~ 260 (269)
T d1rlma_ 181 FIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQA 260 (269)
T ss_dssp EEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCEEEEECCCCHHHHHHCCEECCCCCCCHHHHHHHH
T ss_conf 68884586577788887766502142418999088441999985891899589989999847888188984599999999
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.92 E-value=1.3e-08 Score=81.62 Aligned_cols=108 Identities=21% Similarity=0.166 Sum_probs=87.4
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHH
Q ss_conf 99999996799199994796489999999909998988887644763001259200899965067399809000999999
Q 002765 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (883)
Q Consensus 500 ~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 579 (883)
.+|+.++..|+.+.++||+....+...++++++.. ......+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------~~~~~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------FFLGKLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------------------------------EEESCSCHHHHHH
T ss_pred HHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCC--------------------------------CCCCCCCHHHHHH
T ss_conf 88878765217899966984467899876321220--------------------------------1101363888999
Q ss_pred HHHH-C---CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHH-HHHHHHH
Q ss_conf 9977-6---999999959956978786299429905740889840498861699227-9999999
Q 002765 580 RLQE-R---KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAVLT 639 (883)
Q Consensus 580 ~l~~-~---g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~-i~~~i~~ 639 (883)
.+.+ . .+.|+++||+.||.|||+.|++|+||++|.+.+++.||+|+..+.-.+ +.+++++
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~ 151 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDM 151 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHH
T ss_pred HHHHHHCCCCCEEEEECCCCCHHHHHHHCCEEEECCCCCHHHHHHCCEEECCCCCCCHHHHHHHH
T ss_conf 99998667752257705884078999668928984886499998589991788997639999999
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.86 E-value=5.3e-09 Score=84.57 Aligned_cols=67 Identities=27% Similarity=0.302 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCC-CHHHHHHHH
Q ss_conf 0099999999776----999999959956978786299429905740889840498861699-227999999
Q 002765 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG-LSVIISAVL 638 (883)
Q Consensus 572 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~-~~~i~~~i~ 638 (883)
..|...++.+.+. ...|+++|||.||.+||+.|+.|++|++|.+.+|+.||+++..++ ..++..+++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEECCCCHHHHHHCCEEECCCCCCCHHHHHHH
T ss_conf 505778887766410020207996487636999985891899689989999848999998488869999999
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.83 E-value=4.1e-09 Score=85.46 Aligned_cols=74 Identities=27% Similarity=0.318 Sum_probs=63.5
Q ss_pred EEEECC--CCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 998090--0099999999776----9999999599569787862994299057408898404988616992279999999
Q 002765 566 FAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 566 ~~r~~p--~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
+..+.| ..|...++.+.+. ...++++|||.||.+||+.|+.|++|+||.+.+|+.||+++.+++-+++.+++++
T Consensus 177 ~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 177 FADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 79997488999999999987322357551676588555999984890899589989999847978088875689999998
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.82 E-value=1e-08 Score=82.41 Aligned_cols=73 Identities=26% Similarity=0.324 Sum_probs=63.0
Q ss_pred EEEECCC--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 9980900--099999999776----999999959956978786299429905740889840498861699227999999
Q 002765 566 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 566 ~~r~~p~--~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
+..++|. .|...++.+.+. ...|+++|||.||.+||+.|++|++|++|.+.+|+.||+++.+++..+++.+++
T Consensus 181 ~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 181 YLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEECCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 4565587775167899998860368220899808844099998689089948998999985898858887538999999
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=1.1e-08 Score=81.92 Aligned_cols=130 Identities=18% Similarity=0.149 Sum_probs=90.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
+++|++.+.++.|++.|++++++||.....+..+++.+|+.........+ ....++.... .........+.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~-----~~~~~G~~~g----~~~~~p~~~~~ 152 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL-----KFYFNGEYAG----FDETQPTAESG 152 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECE-----EECTTSCEEE----ECTTSGGGSTT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEE-----EEEEHHCCCC----CEEEEEEECCC
T ss_conf 04777999999997379979998999358888889870996100366553-----2220000036----42224652422
Q ss_pred CHHHHHHHHHHC--CCEEEEECCCCCCHHHHHHCCEEEEEC-C-CCHHHHHCCCEEECCCCCHHH
Q ss_conf 099999999776--999999959956978786299429905-7-408898404988616992279
Q 002765 573 HKYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA-D-ATDAARSASDIVLTEPGLSVI 633 (883)
Q Consensus 573 ~K~~iv~~l~~~--g~~v~~iGDg~ND~~al~~AdvgIa~~-~-~~~~a~~aad~vl~~~~~~~i 633 (883)
.|..+++.+++. ...+.++|||.||++|++.|+++||++ + .....++.+|+++. +|..+
T Consensus 153 ~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~el 215 (217)
T d1nnla_ 153 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVEL 215 (217)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGG
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEEC--CHHHH
T ss_conf 0899999998634866638997178659989868921997987778999986899868--98884
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.71 E-value=1.1e-08 Score=82.15 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=104.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+............+... ............+...|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------~~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------HIDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------EEECTTCCCTTCCSCCSS
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCC------EECCCCCCCCCCCCCCHH
T ss_conf 42499999999998542531157753066699999980995014543479828810------220101354325567899
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHC-CCEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 099999999776999999959956978786299429905740889840-498861699227999999999999999
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA-SDIVLTEPGLSVIISAVLTSRAIFQRM 647 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~a-ad~vl~~~~~~~i~~~i~~gR~~~~~i 647 (883)
.|..+++.++..++.|.++||+.||++|++.||++++++...+.+++. .++. .-++|+.+...+++-....+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCEEEEECCHHHHHHHCCCCEE-ECCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999998467886389980763139999988997870646799998299836-2499999999999987899985
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.65 E-value=3.3e-07 Score=70.40 Aligned_cols=130 Identities=16% Similarity=0.161 Sum_probs=91.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
+..+.....++.+ +.+.+...+++.............++.............. .........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---------------RVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS---------------CEEEEECCSSS
T ss_pred CCCCHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHHHCCCHHHCCEEEEECCC---------------CCCCCCCCCHH
T ss_conf 5562488999886-0474688851671388889999847833331102562144---------------45432112014
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 0999999997769999999599569787862994299057408898404988616992279999999
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
.+...++.++...+.|+++|||.||++||+.|++||||+...+..++++|+++. +++..+..++..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCEEECCCHHHHHHCCCCEEE-CCHHHHHHHHHH
T ss_conf 578899986425652188438732799998589409978977999867895562-688999999999
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.62 E-value=2e-07 Score=72.12 Aligned_cols=53 Identities=19% Similarity=0.152 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHH----C-CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEE
Q ss_conf 009999999977----6-9999999599569787862994299057408898404988
Q 002765 572 EHKYEIVKRLQE----R-KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (883)
Q Consensus 572 ~~K~~iv~~l~~----~-g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~v 624 (883)
..|..-++.+.+ . ...++++|||.||.+||+.|+.||+|+|+....++.+|.+
T Consensus 178 ~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~~~~~~~~~i 235 (243)
T d1wzca1 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSI 235 (243)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTCEEESCH
T ss_pred HCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
T ss_conf 1007799999998359991419998498858999984993899279986887023188
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.57 E-value=1.5e-07 Score=73.21 Aligned_cols=71 Identities=18% Similarity=0.133 Sum_probs=58.7
Q ss_pred ECCCCHHHHHHHHHHCC----CEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCC-------EEECCCCCHHHHHHH
Q ss_conf 09000999999997769----9999995995697878629942990574088984049-------886169922799999
Q 002765 569 VFPEHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD-------IVLTEPGLSVIISAV 637 (883)
Q Consensus 569 ~~p~~K~~iv~~l~~~g----~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad-------~vl~~~~~~~i~~~i 637 (883)
.....|...++.+.+.. ..|.++|||.||.+||+.|+.|++|+|+.+.+++.|| ++...++..++.+++
T Consensus 158 ~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l 237 (244)
T d1s2oa1 158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAI 237 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHH
T ss_conf 67641557788887741577303799758887799996189189967999999998632366653771899714899999
Q ss_pred HH
Q ss_conf 99
Q 002765 638 LT 639 (883)
Q Consensus 638 ~~ 639 (883)
++
T Consensus 238 ~~ 239 (244)
T d1s2oa1 238 AH 239 (244)
T ss_dssp HH
T ss_pred HH
T ss_conf 98
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.57 E-value=1.5e-07 Score=73.15 Aligned_cols=130 Identities=24% Similarity=0.305 Sum_probs=91.2
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEE--E
Q ss_conf 99997869999999967991999947964899999999099989888876447630012592008999650673998--0
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~ 569 (883)
.++.+++.+.++.++..|..+.++||.....+....++.+....... .+...... ....... .
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~ 138 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGK-------------LTGDVEGEVL 138 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTE-------------EEEEEECSSC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCHHHHHHH--HHCCCCCC-------------CCCCCCCCCC
T ss_conf 00135599999999974987876326542222302220320466654--42110122-------------2123332111
Q ss_pred CCCCHHHHHHHH----HHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf 900099999999----77699999995995697878629942990574088984049886169922799999
Q 002765 570 FPEHKYEIVKRL----QERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 570 ~p~~K~~iv~~l----~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
.+..|...++.+ +-..+.+.++|||.||++|++.|++|||| ++.+..++.||+++..+++++++..|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred CCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCEEE-CCCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 123454103357888466655417863784749999988987899-98999997499999179999999986
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.47 E-value=5.6e-06 Score=60.64 Aligned_cols=43 Identities=16% Similarity=0.063 Sum_probs=36.5
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC
Q ss_conf 9999786999999996799199994796489999999909998
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~ 534 (883)
..+.+.+.+++++++++|+.++++||++...+..+.+++++..
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCCHHHCHHHHHHHCCCC
T ss_conf 9479999999999997799899996897365306888734578
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.80 E-value=0.00014 Score=49.71 Aligned_cols=128 Identities=19% Similarity=0.268 Sum_probs=90.2
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH---HHCCCEEEEEECCCCCCCCEEEEEECCCCC
Q ss_conf 75553010035877099999999862456778388999986079155---512940788524887686179999958996
Q 002765 346 VDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKE---ARAGVREVHFLPFNPVDKRTALTYIDSDGN 422 (883)
Q Consensus 346 v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~al~~~~~~~~~---~~~~~~~l~~~~f~s~~k~~svv~~~~~g~ 422 (883)
++.+.+ ..|.++++++.+++.++..+. ||+..|+++++.+... ...........+|....+...+.+ +|
T Consensus 4 ~td~ip---~~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~g- 75 (136)
T d2a29a1 4 ASEFIP---AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINI---DN- 75 (136)
T ss_dssp EEEEEE---CTTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEE---TT-
T ss_pred CCEEEE---CCCCCHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEE---CC-
T ss_conf 546773---799999999999999727778-6689999999998558775531101244445432342588987---89-
Q ss_pred EEEEECCCHHHHHHHCCC-CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 999983976889986027-8468999999999997706827799830059878889999936988612479999
Q 002765 423 WHRASKGAPEQILALCNC-REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (883)
Q Consensus 423 ~~~~~kGa~e~il~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 495 (883)
..+.+|++..+...... .....+.+.+.++++..+|.+++.++... +++|++++.|++|
T Consensus 76 -~~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 76 -RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp -EEEEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred -EEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEEEEECC
T ss_conf -79996678999999997189880999999999997798599999999-------------9999999983058
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.71 E-value=3.3e-05 Score=54.54 Aligned_cols=67 Identities=9% Similarity=0.169 Sum_probs=46.4
Q ss_pred EEEECC--CCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf 998090--009999999977699999995995697878629942990574088984049886169922799999
Q 002765 566 FAGVFP--EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 566 ~~r~~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
+....| .+|...++.+.+.. .+.++||+.||.+||+.++.|++|++|. .+.+|++.+.+ ...+...+
T Consensus 150 ~idi~p~g~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS--HHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHCCC-CCEEECCCCCHHHHHHCCCCEEEEEECC--CCCCCEEECCC--HHHHHHHH
T ss_conf 8997369898899999974404-4566438887099996028828999689--87667287599--99999999
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.53 E-value=1.9e-05 Score=56.47 Aligned_cols=58 Identities=22% Similarity=0.354 Sum_probs=48.1
Q ss_pred EECC--CCHHHHHHHHHHC-CCEEEEECC----CCCCHHHHHHCC-EEEEECCCCHHHHHCCCEEE
Q ss_conf 8090--0099999999776-999999959----956978786299-42990574088984049886
Q 002765 568 GVFP--EHKYEIVKRLQER-KHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVL 625 (883)
Q Consensus 568 r~~p--~~K~~iv~~l~~~-g~~v~~iGD----g~ND~~al~~Ad-vgIa~~~~~~~a~~aad~vl 625 (883)
.++| ..|...++.+.+. .+.|.++|| |.||.+||++|+ .|+||+|+.+.+|..+|+++
T Consensus 178 ei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 178 DVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp EEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred EECCHHCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCEEECCCHHHHHHHHHHHCC
T ss_conf 320322027899999966984459998688999997299997179858991898999999998619
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.37 E-value=0.0023 Score=39.99 Aligned_cols=132 Identities=11% Similarity=0.090 Sum_probs=80.9
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEE---
Q ss_conf 99997869999999967991999947964899999999099989888876447630012592008999650673998---
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 568 (883)
-++|+++++.++.|++.|+++.++||--......++++.|+..... .+..+..... +. .....
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni---~I~sN~l~f~--~~---------~~~~~~~~ 199 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMDFD--EN---------GVLKGFKG 199 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE---EEEEECEEEC--TT---------SBEEEECS
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCC---EEEEEEEEEE--CC---------EEEEECCC
T ss_conf 8766389999999997497089985873999999999829986574---6996579970--88---------26860347
Q ss_pred --ECCCCHHHHH----HHHHH--CCCEEEEECCCCCCHHHHHH---CCEEEEEC--CC-----CHHHHHCCCEEECCCCC
Q ss_conf --0900099999----99977--69999999599569787862---99429905--74-----08898404988616992
Q 002765 569 --VFPEHKYEIV----KRLQE--RKHICGMTGDGVNDAPALKK---ADIGIAVA--DA-----TDAARSASDIVLTEPGL 630 (883)
Q Consensus 569 --~~p~~K~~iv----~~l~~--~g~~v~~iGDg~ND~~al~~---AdvgIa~~--~~-----~~~a~~aad~vl~~~~~ 630 (883)
.....|...+ ...+. ....+.++|||.||..|.+. ++..+++| +. -+.-.++-|+|+.+|.-
T Consensus 200 ~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~ 279 (291)
T d2bdua1 200 ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEES 279 (291)
T ss_dssp SCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCB
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 86434568631544599885327867689996777689998388544632454313766998799987607978856878
Q ss_pred HHHHHHH
Q ss_conf 2799999
Q 002765 631 SVIISAV 637 (883)
Q Consensus 631 ~~i~~~i 637 (883)
-.++..+
T Consensus 280 ~~v~~~i 286 (291)
T d2bdua1 280 LEVVNSI 286 (291)
T ss_dssp CHHHHHH
T ss_pred HHHHHHH
T ss_conf 4689999
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.28 E-value=0.00094 Score=43.07 Aligned_cols=124 Identities=15% Similarity=0.148 Sum_probs=79.6
Q ss_pred CCCCHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 9978699999999679-919999479648999999990999898888764476300125920089996506739980900
Q 002765 494 PRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 494 lr~~~~~~I~~l~~~g-i~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
+-|++.+.++.|++.| +++.++|+.....+....+..|+.... ..+...+.... . .-.|.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f---d~i~~~~~~~~--~--------------k~~p~ 152 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF---PFGAFADDALD--R--------------NELPH 152 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC---SCEECTTTCSS--G--------------GGHHH
T ss_pred ECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC---CCCCCCCCCCC--C--------------CCHHH
T ss_conf 06852888765411231122355788500000123320122222---22222233443--4--------------54157
Q ss_pred CHHHHHHHHHH---CCCEEEEECCCCCCHHHHHHCCEE---EEECCC--CHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 09999999977---699999995995697878629942---990574--0889840498861699227999999
Q 002765 573 HKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIG---IAVADA--TDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iv~~l~~---~g~~v~~iGDg~ND~~al~~Advg---Ia~~~~--~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
--...++.+.. ..+.++|+||+.+|+.|-+.|++. |+.|.. .+..+..+|+++ ++++.+...+.
T Consensus 153 ~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 153 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHHHHHCCCCCCHHHHEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 7888765300248776680232487278999998499799980799998899658999998--99999999999
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.26 E-value=0.0014 Score=41.80 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=84.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
++.|++.++++.|++.|+++.++|+.+......+-+..|+.....+ ..+.+ +.. ......|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d-~~~~~-d~~----------------~~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD-FLVTP-DDV----------------PAGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS-CCBCG-GGS----------------SCCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCC-CCCCC-CCC----------------CCCCCCHH
T ss_conf 3177579999998850244110179835668888998764012233-44555-432----------------22345817
Q ss_pred CHHHHHHHHHHC-CCEEEEECCCCCCHHHHHHCCEE-EEECCCCH---------------------------HHHHCCCE
Q ss_conf 099999999776-99999995995697878629942-99057408---------------------------89840498
Q 002765 573 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIG-IAVADATD---------------------------AARSASDI 623 (883)
Q Consensus 573 ~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~Advg-Ia~~~~~~---------------------------~a~~aad~ 623 (883)
.-....+.+.-. .+.++|+||+.+|+.+=+.|++- |++..|.. ..+.-||+
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~ 240 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 240 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 78999999589876518999687340899998799899981377778989899862799999999999999997479989
Q ss_pred EECCCCCHHHHHHHH
Q ss_conf 861699227999999
Q 002765 624 VLTEPGLSVIISAVL 638 (883)
Q Consensus 624 vl~~~~~~~i~~~i~ 638 (883)
++ +++..+..+|.
T Consensus 241 vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 241 TI--ETMQELESVME 253 (257)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred EE--CCHHHHHHHHH
T ss_conf 98--79999999999
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=96.92 E-value=0.0011 Score=42.64 Aligned_cols=124 Identities=17% Similarity=0.125 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
++.|++++.++.|++.|+++.++|+.....+..+.+.+|+.... ...+...+.. .....|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSSH
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHC--CCCCCCCCCC-----------------CCCCCCH
T ss_conf 16889999999985068742021345288999999864963421--4311233345-----------------4432101
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECC----CCHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf 0999999997769999999599569787862994-299057----4088984049886169922799999
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-gIa~~~----~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
--..+.+.++-....++++||+.+|+.+-+.|++ .|.+.. ..+.....+|+++ +++..++.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred HHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 3578998864311002021176989999999099599991799983406666999998--9999998863
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.66 E-value=0.003 Score=39.13 Aligned_cols=120 Identities=17% Similarity=0.186 Sum_probs=79.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.... ...+.+ +.. -.+...|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F--~~i~~~-~~~----------------~~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASA-EKL----------------PYSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEC-TTS----------------SCCTTSTH
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCC-CCC----------------CCCHHHHH
T ss_conf 45632799988754034552213321000111222222333222--222232-322----------------21014578
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEE-EECC--C-CHHHHHCCCEEECCCCCHHH
Q ss_conf 099999999776999999959956978786299429-9057--4-08898404988616992279
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVAD--A-TDAARSASDIVLTEPGLSVI 633 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgI-a~~~--~-~~~a~~aad~vl~~~~~~~i 633 (883)
--...++.+.-..+.++++||+.+|+.|-+.|++.. ++.. . .+.....||+++ +++..+
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred HHHHHHHHCCCCCHHCEEEEECHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCEEE--CCHHHC
T ss_conf 999999972999513089960989999999839979998998776662235899998--992669
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.25 E-value=0.027 Score=31.48 Aligned_cols=134 Identities=17% Similarity=0.141 Sum_probs=76.0
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHH---------------HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99786999999996799199994796489---------------999999909998988887644763001259200899
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAI---------------GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDE 558 (883)
Q Consensus 494 lr~~~~~~I~~l~~~gi~v~i~TGD~~~~---------------a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (883)
+-|++.++++.|+++|+++.++|...... ........|+..... .+..... ......
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~cp~~p-----~~~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGI---YYCPHHP-----QGSVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEE---EEECCBT-----TCSSGG
T ss_pred ECCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE---EECCCCC-----CCCCCC
T ss_conf 88789999999866184166664220235566678765401012445555401344540---5655333-----466553
Q ss_pred HHHHCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEE--EEE--CCC-CHHHHHCCCEEECCCCCHHH
Q ss_conf 9650673998090009999999977699999995995697878629942--990--574-08898404988616992279
Q 002765 559 LIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAV--ADA-TDAARSASDIVLTEPGLSVI 633 (883)
Q Consensus 559 ~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Advg--Ia~--~~~-~~~a~~aad~vl~~~~~~~i 633 (883)
......+..-.|.--..+.+.+.-..+.+.||||..+|+.|=+.|+++ +.+ |.+ .+.....||+++ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEE--CCHHHH
T ss_conf -33455556874322310122116553445122798999999998288847998999777721024798898--999999
Q ss_pred HHHHH
Q ss_conf 99999
Q 002765 634 ISAVL 638 (883)
Q Consensus 634 ~~~i~ 638 (883)
++.|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHHC
T ss_conf 99963
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.07 E-value=0.021 Score=32.33 Aligned_cols=124 Identities=17% Similarity=0.151 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
++.|++.++++.|+ .|+++.++|+..........+..|+.... ..+...... ....-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f---d~i~~s~~~----------------~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF---DSITTSEEA----------------GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC---SEEEEHHHH----------------TBCTTSHH
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECCCCCCCHHHHCCCCCCCCC---CCCCCCCCC----------------CCCCHHHH
T ss_conf 51006999998764-03760366213221101110123322100---223333222----------------23221357
Q ss_pred CHHHHHHHHHHCCCEEEEECCC-CCCHHHHHHCCEEEEE---CCCCHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 0999999997769999999599-5697878629942990---5740889840498861699227999999
Q 002765 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg-~ND~~al~~AdvgIa~---~~~~~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
-=....+.+.-....++++||. .+|+.+-+.|++.... +.........+|+++ ++++.++.++.
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE--CCHHHHHHHHH
T ss_conf 788777640664312645621748679999985998999889998701045899998--89999999999
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.04 E-value=0.01 Score=34.95 Aligned_cols=117 Identities=15% Similarity=0.047 Sum_probs=76.3
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECC
Q ss_conf 99997869999999967991999947964899999999099989888876447630012592008999650673998090
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (883)
-.+.|++.+.++.|++.|+++.++|+..........+.+|+.......... ... . ...+..|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~-~d~-~----------------~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGH-FDT-K----------------IGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEE-ECG-G----------------GCCTTCH
T ss_pred CCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCEE-ECC-C----------------CCCCCCC
T ss_conf 666887899999986424754445898488999999972840433202333-024-5----------------3357780
Q ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEE----CCC-CHHHHHCCCEEEC
Q ss_conf 009999999977699999995995697878629942990----574-0889840498861
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADA-TDAARSASDIVLT 626 (883)
Q Consensus 572 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~----~~~-~~~a~~aad~vl~ 626 (883)
+-=....+.+.-..+.++|+||..+|+.+=++|++.... |+. .......++.++.
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCEEC
T ss_conf 888999999489967489994799999999985997999968998998634457881799
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.92 E-value=0.0094 Score=35.17 Aligned_cols=117 Identities=10% Similarity=0.054 Sum_probs=77.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
++.+++.+.++.++..+ ++.++|+.....+..+.+..|+.... ..+ +.+.-.+.
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f---d~v----------------------~~~~~~~~ 137 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF---DGI----------------------YGSSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC---SEE----------------------EEECSSCC
T ss_pred CCHHHHHHHHHHHHCCC-CHHHCCCCCCHHHHHHHHHHCCCCCC---CCC----------------------CCCCCCCC
T ss_conf 21068999875420134-10000233210115778750123320---000----------------------22232222
Q ss_pred CHHH----HHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEE--CC-C-CHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf 0999----999997769999999599569787862994-2990--57-4-088984049886169922799999
Q 002765 573 HKYE----IVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--AD-A-TDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~----iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-gIa~--~~-~-~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
.|.. ..+.++-..+.++|+||+.+|+.|-+.|++ .|++ |. . .+.....+|+++ +++..+...+
T Consensus 138 ~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~l 209 (210)
T d2ah5a1 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAYF 209 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHHT
T ss_pred CCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 23332110123320120016465477789999998599399985798997789768999998--9999999985
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.90 E-value=0.0026 Score=39.59 Aligned_cols=50 Identities=20% Similarity=0.287 Sum_probs=35.9
Q ss_pred CCHHHHHHHHHH-CCCEEEEECC----CCCCHHHHHHCC-EEEEECCCCHHHHHCCC
Q ss_conf 009999999977-6999999959----956978786299-42990574088984049
Q 002765 572 EHKYEIVKRLQE-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASD 622 (883)
Q Consensus 572 ~~K~~iv~~l~~-~g~~v~~iGD----g~ND~~al~~Ad-vgIa~~~~~~~a~~aad 622 (883)
.+|...++.+.. ..+.++++|| |.||.+||+.|+ .|+++++..+..+ .++
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~-~~~ 239 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR-ICE 239 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH-HHH
T ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEECCHHHHHH-HHH
T ss_conf 67899999984899362999868999999769999715972999079999999-999
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.97 E-value=0.0087 Score=35.41 Aligned_cols=119 Identities=14% Similarity=0.080 Sum_probs=74.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
++.|++.++++.|++.|+++.++|+... .+..+.+..|+.... ..+.+.+.. ....-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f---~~i~~s~~~----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF---TEILTSQSG----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE---EEEECGGGC----------------CCCTTSSH
T ss_pred CCCCHHHHHHHCCCCCCCCHHHHCCCCH-HHHHHHHHCCCCCCC---CCCCCCCCC----------------CCCCHHHH
T ss_conf 4563477654211022220022113510-334433310122122---222222234----------------43202578
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEE-EECCCCHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf 099999999776999999959956978786299429-90574088984049886169922799999
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATDAARSASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgI-a~~~~~~~a~~aad~vl~~~~~~~i~~~i 637 (883)
--..+.+.+.-..+.++||||+.+|+.+-+.|++.. ++..+.. .+|..+ +++..+..++
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRIF 201 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCC----CCCEEC--CCHHHHHHHH
T ss_conf 88999998299975189994798999999986996999847999----958004--8998999986
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.75 E-value=0.042 Score=30.05 Aligned_cols=91 Identities=19% Similarity=0.254 Sum_probs=63.1
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCH----HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEE
Q ss_conf 997869999999967991999947964----8999999990999898888764476300125920089996506739980
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (883)
Q Consensus 494 lr~~~~~~I~~l~~~gi~v~i~TGD~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (883)
+.|++.+.++.+++.|+++..+||+.. .|+....+.+|+.........+.+.+ .
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------~ 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------P 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC----------------------T
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC----------------------C
T ss_conf 662499999999975974999938845657999999998719874566634761799----------------------9
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEE
Q ss_conf 9000999999997769999999599569787862994-2990
Q 002765 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (883)
Q Consensus 570 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-gIa~ 610 (883)
....|...++. -.+++++||..+|..+-++|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHHHHHH----CCEEEEECCCHHHHHHHHHCCCCCEEE
T ss_conf 82379999997----496899659888876798759983575
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.74 E-value=0.068 Score=28.36 Aligned_cols=142 Identities=15% Similarity=0.156 Sum_probs=89.8
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC----CCCCCCC-----------CCCCCCHHHH
Q ss_conf 997869999999967991999947964899999999099989888876----4476300-----------1259200899
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS----LLGQDKD-----------ASIAALPVDE 558 (883)
Q Consensus 494 lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~----~~~~~~~-----------~~~~~~~~~~ 558 (883)
+-|++.++++.+++. ...+++|---.+...++|+..|+..+..+... +.-..+. ...+.+++.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ECCCHHHHHHHHHHH-CCCEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 268889999999864-8847985358999999985358874010023443124787177999988765303753778899
Q ss_pred -------------HHHHCCEEEEECCCCHHHHHHHHHHC--CCEEEEECCCCCCHHHHHHCCE--EEEEC-CCCHHHHHC
Q ss_conf -------------96506739980900099999999776--9999999599569787862994--29905-740889840
Q 002765 559 -------------LIEKADGFAGVFPEHKYEIVKRLQER--KHICGMTGDGVNDAPALKKADI--GIAVA-DATDAARSA 620 (883)
Q Consensus 559 -------------~~~~~~v~~r~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~al~~Adv--gIa~~-~~~~~a~~a 620 (883)
++.++... -...|..+++..-.. -..-+++||+..|+.||+.|.= |++++ ||.+-+...
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~e 237 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKH 237 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHCCC---CCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf 999871311576687640214---78516789986336126986412367533278999974479836885686244453
Q ss_pred CCEEECCCCCHHHHHHHHH
Q ss_conf 4988616992279999999
Q 002765 621 SDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 621 ad~vl~~~~~~~i~~~i~~ 639 (883)
||+++.+.+...+...+..
T Consensus 238 A~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 238 ADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp CSEEEECSSTHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHH
T ss_conf 4468966633578899999
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.56 E-value=0.12 Score=26.46 Aligned_cols=104 Identities=17% Similarity=0.220 Sum_probs=69.1
Q ss_pred CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHH
Q ss_conf 87709999999986245677838899998607915551294078852488768617999995899699998397688998
Q 002765 357 GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA 436 (883)
Q Consensus 357 ~~~~~~~l~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~~f~s~~k~~svv~~~~~g~~~~~~kGa~e~il~ 436 (883)
+.++++++.+++..+..++ ||+..|+++++.+...........+..| .+. + .++ .+.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~S~-HPlA~AIv~~a~~~~~~~~~~~~~~~~~-----G~G-i-----~g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIA-----GEG-V-----VAD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHTTTCCCCCCSCEEEET-----TTE-E-----EET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHCCCCCCCCCCEEEC-----CCE-E-----EEE--EEEECCHHHHHH
T ss_conf 9999999999999877687-8239999999998057877632316631-----633-7-----868--999776887776
Q ss_pred HCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECC
Q ss_conf 602784689999999999977068277998300598788899999369886124
Q 002765 437 LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL 490 (883)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~ 490 (883)
.. ....+.+.+.++.+..+|..++.++... .++|++++
T Consensus 75 ~~---~~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TT---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CC---CCCCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEE
T ss_conf 09---9889899999999986799599999999-------------99999997
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.50 E-value=0.042 Score=30.04 Aligned_cols=95 Identities=11% Similarity=0.015 Sum_probs=62.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECC
Q ss_conf 9997869999999967991999947964-899999999099989888876447630012592008999650673998090
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (883)
++.|++.+.++.|++.|+++.++|+.+. ..+...-+..++..... .+...-.|
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--------------------------EEEESSSC
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHCCCCCCCCE--------------------------EEECCCCC
T ss_conf 6055799999999978994899735662101000000023333210--------------------------23226689
Q ss_pred --CCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEE-ECCC
Q ss_conf --00999999997769999999599569787862994299-0574
Q 002765 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA 613 (883)
Q Consensus 572 --~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa-~~~~ 613 (883)
+.-..+.+.+.-..+.++++||..+|+.+-+.|++-.. +..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G 144 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDG 144 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSC
T ss_pred CHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCEEEEECCC
T ss_conf 769999999996888699798748787899999869979997999
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.47 E-value=0.077 Score=27.94 Aligned_cols=109 Identities=13% Similarity=0.054 Sum_probs=67.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
++.|++++.++.+++.|+++.++|+.+.... ..-+..|+.... ..+.+.+... .....|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f---d~i~~~~~~~----------------~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF---TEVVTSSSGF----------------KRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE---EEEECGGGCC----------------CCTTSCH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH-HHHHHHCCCCCC---CCCCCCCCCC----------------CCCCCHH
T ss_conf 0244268888877764212233455762101-345542022122---2212222234----------------5688899
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCE
Q ss_conf 099999999776999999959956978786299429905740889840498
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 623 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~~~~~~~a~~aad~ 623 (883)
--....+.+. .+.+.++||..+|+.+-+.|++-...=++....++..|+
T Consensus 139 ~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHCC--CCCEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHCCC
T ss_conf 9999999849--997699907999999999859979999998874753579
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.44 E-value=0.05 Score=29.43 Aligned_cols=124 Identities=11% Similarity=0.123 Sum_probs=78.1
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCC
Q ss_conf 99786999999996799199994796489999999909998988887644763001259200899965067399809000
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (883)
+.|++.++++.|++ |+++.++|+.........-+..|+.... ...+...+.. ...-.|+-
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~~-----------------~~KP~p~~ 169 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPSI 169 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHHH
T ss_pred CCCCHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHCCCCCCC--CCCCCCCCCC-----------------CCHHHHHH
T ss_conf 58348999998411-4606886223200123333202222222--2223222222-----------------10033324
Q ss_pred HHHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCEE-EEEC--C--CCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 9999999977699999995995-697878629942-9905--7--408898404988616992279999999
Q 002765 574 KYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVA--D--ATDAARSASDIVLTEPGLSVIISAVLT 639 (883)
Q Consensus 574 K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~Advg-Ia~~--~--~~~~a~~aad~vl~~~~~~~i~~~i~~ 639 (883)
=..+.+.+.-..+.++++||.. +|+.+-+.|++. +..- . ........+|+++ +++..+..+++.
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~~ 239 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQS 239 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHHH
T ss_pred HHHHHHHHHCCHHHCCEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHHHHH
T ss_conf 7889999602877524203571867999998399499997799887643357999898--999999999999
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=94.33 E-value=0.0041 Score=37.99 Aligned_cols=119 Identities=10% Similarity=0.065 Sum_probs=76.8
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCC
Q ss_conf 99786999999996799199994796489999999909998988887644763001259200899965067399809000
Q 002765 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (883)
Q Consensus 494 lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (883)
+.|++.+.++.|++ ++++.++|+.....+..+.+..|+.... ..+.+.+.. ....-.|+-
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~~ 142 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM---AVTISADDT----------------PKRKPDPLP 142 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE---EEEECGGGS----------------SCCTTSSHH
T ss_pred CCCCHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCC----------------CCCHHHHHH
T ss_conf 46403444332014-5542000232111111111222222222---222222222----------------221034443
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEE---CCCCHHHHHCCCEEECCCCCHHHH
Q ss_conf 9999999977699999995995697878629942990---574088984049886169922799
Q 002765 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVII 634 (883)
Q Consensus 574 K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~---~~~~~~a~~aad~vl~~~~~~~i~ 634 (883)
-..+++.++-..+.++|+||+.+|+.+-+.|++.... |..+....+.+|.++ +++..++
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred HCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCEE--CCHHHHH
T ss_conf 0023421045113406854778789999984992999935889756765329274--8999998
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.74 E-value=0.076 Score=27.97 Aligned_cols=64 Identities=25% Similarity=0.259 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCE-EEEECCC---CHHHHH---CCCEEECCCCCHHHHHHH
Q ss_conf 009999999977699999995995-69787862994-2990574---088984---049886169922799999
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAVADA---TDAARS---ASDIVLTEPGLSVIISAV 637 (883)
Q Consensus 572 ~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~Adv-gIa~~~~---~~~a~~---aad~vl~~~~~~~i~~~i 637 (883)
.--....+.+.-..+.++||||+. +|+.+-+.|++ +|.+..| .+.... .+|+++ +++..+.+++
T Consensus 189 ~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 189 LVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHCCEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEE--CCHHHHHHHH
T ss_conf 88888876640472211031687167899999879969998989998778863689998998--8999999976
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=93.02 E-value=0.15 Score=25.59 Aligned_cols=90 Identities=11% Similarity=-0.031 Sum_probs=57.7
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH----HHHHH-------HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 799997869999999967991999947964899----99999-------9099989888876447630012592008999
Q 002765 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIG----KETGR-------RLGMGTNMYPSSSLLGQDKDASIAALPVDEL 559 (883)
Q Consensus 491 ~D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a----~~ia~-------~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (883)
++++.|++.+.++.|++.|.++.++||++.... ..+.. ..+...
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~------------------------- 88 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL------------------------- 88 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-------------------------
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCE-------------------------
T ss_conf 0844878999999998444808999268578899999999997501333579867-------------------------
Q ss_pred HHHCCEEEE------ECCCCHHHHHHHHHHC-CCEEEEECCCCCCHHHHHHCCEEE
Q ss_conf 650673998------0900099999999776-999999959956978786299429
Q 002765 560 IEKADGFAG------VFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGI 608 (883)
Q Consensus 560 ~~~~~v~~r------~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvgI 608 (883)
...+.+ ..+.-|..+.+.+... ..+++++||...|+.|.+.+++-.
T Consensus 89 ---~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~ 141 (149)
T d1ltqa1 89 ---VMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 141 (149)
T ss_dssp ---SEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ---EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCE
T ss_conf ---98632555566770487899999732577755999869789999999879968
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=92.16 E-value=0.017 Score=33.13 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=34.5
Q ss_pred HHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCE-EEEECCC---CH---HHHHCCCEEECC
Q ss_conf 999999977699999995995-69787862994-2990574---08---898404988616
Q 002765 575 YEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAVADA---TD---AARSASDIVLTE 627 (883)
Q Consensus 575 ~~iv~~l~~~g~~v~~iGDg~-ND~~al~~Adv-gIa~~~~---~~---~a~~aad~vl~~ 627 (883)
..+.+.+.-..+.++||||+. +|+.|-+.|++ +|.+.+| .+ .++..+|+++.+
T Consensus 187 ~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~s 247 (253)
T d1yv9a1 187 ERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 247 (253)
T ss_dssp HHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred HHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 7899984888442378437827799999987998999898999978897368999789799
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=91.90 E-value=0.083 Score=27.68 Aligned_cols=122 Identities=8% Similarity=0.041 Sum_probs=78.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
.+.+++.++++.+++.|+++.++|+..........+..++.... ...+...+ . ......|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~-~----------------~~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDP-V----------------QVYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGG-G----------------TCCTTSHH
T ss_pred CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCC--CCEEEEEE-E----------------ECCCCHHH
T ss_conf 21201078999887517857764211799999987411445532--10022210-0----------------01450778
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEE-C---CCCHHHHHCCCEEECCCCCHHHHH
Q ss_conf 09999999977699999995995697878629942990-5---740889840498861699227999
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARSASDIVLTEPGLSVIIS 635 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvgIa~-~---~~~~~a~~aad~vl~~~~~~~i~~ 635 (883)
-=....+.+.-..+.++++||..+|+-+=+.|++-... . ...+.....+|+++ +++..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHH
T ss_conf 899999981778714899804837699999869979998179987643368999998--99999985
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=91.73 E-value=0.09 Score=27.37 Aligned_cols=113 Identities=7% Similarity=-0.000 Sum_probs=68.8
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECC
Q ss_conf 99997869999999967991999947964899999999099989888876447630012592008999650673998090
Q 002765 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (883)
Q Consensus 492 D~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (883)
.++-|++.+.++.|++.|+++.++|+... +....+..|+..... ..+.+ +.. ....-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~--~i~~~-~~~----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFD--AIADP-AEV----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCS--EECCT-TTS----------------SSCTTST
T ss_pred CCCCCCCEECCCCCCCCCCCEEEEEECCH--HHHHHHHHCCCCCCC--CCCCC-CCC----------------CCCCCCH
T ss_conf 20258740102212224442489963231--357887635664333--11111-111----------------1123575
Q ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCCHHHHHCCCEEECC
Q ss_conf 00999999997769999999599569787862994-299057408898404988616
Q 002765 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTE 627 (883)
Q Consensus 572 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-gIa~~~~~~~a~~aad~vl~~ 627 (883)
+-=....+.+.-..+.++|+||..+|+.+-+.|++ .|+++.+. ....++.++.+
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~--~~~~~~~~~~~ 203 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIVPD 203 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEESS
T ss_pred HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCHH--HCCCCCEECCC
T ss_conf 88888898739887407999669888999998699899999811--24656477588
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=91.53 E-value=0.27 Score=23.63 Aligned_cols=58 Identities=16% Similarity=0.093 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCC-CHHHHHHCCE-EEEE--CCCCHHHH----HCCCEEECC
Q ss_conf 900099999999776999999959956-9787862994-2990--57408898----404988616
Q 002765 570 FPEHKYEIVKRLQERKHICGMTGDGVN-DAPALKKADI-GIAV--ADATDAAR----SASDIVLTE 627 (883)
Q Consensus 570 ~p~~K~~iv~~l~~~g~~v~~iGDg~N-D~~al~~Adv-gIa~--~~~~~~a~----~aad~vl~~ 627 (883)
.|+--..+.+.+.-..+.++||||+.+ |+.+-++|++ +|.+ |..+.... ..+|+++.+
T Consensus 178 ~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~s 243 (250)
T d2c4na1 178 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred HHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 046676666663278034578468727799999987998999899999988997378999999899
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=90.75 E-value=0.26 Score=23.79 Aligned_cols=125 Identities=9% Similarity=0.049 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCC
Q ss_conf 99978699999999679919999479648999999990999898888764476300125920089996506739980900
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (883)
.+.+++.+.++.++ .+..++|+.....+...-+..|+...... ....+.... .-.+...|+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~---------------~~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAP-HIYSAKDLG---------------ADRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTT-CEEEHHHHC---------------TTCCTTSSH
T ss_pred CHHHHHHHHHHHCC---CCCEEEEECCHHHHHHHHCCCCCCCCCCE-EECCCCCCC---------------CCCCCCCHH
T ss_conf 11345788765103---23225641204555554302344433210-001232112---------------443445889
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEE-EEECCCC--------HHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 09999999977699999995995697878629942-9905740--------889840498861699227999999
Q 002765 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT--------DAARSASDIVLTEPGLSVIISAVL 638 (883)
Q Consensus 573 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Advg-Ia~~~~~--------~~a~~aad~vl~~~~~~~i~~~i~ 638 (883)
-=....+.+.-..+.++++||+.+|+.+=+.|++- |++..+. +....-+|+++ +++..+..++.
T Consensus 146 ~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 146 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 99877875089873289975878789999984998999836987875317789767999999--99999999999
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=90.27 E-value=0.28 Score=23.45 Aligned_cols=136 Identities=18% Similarity=0.093 Sum_probs=65.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCH--------HH-------HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 9997869999999967991999947964--------89-------99999990999898888764476300125920089
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQL--------AI-------GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~~--------~~-------a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (883)
.+-|++.++++.|+++|+++.++|...- .. ....-++.|+................ ...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~----~~~-- 121 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVG----PLA-- 121 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCS----TTC--
T ss_pred EECCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC----CCC--
T ss_conf 76344899999998629757986165432144542434444336777776641355325887424644566----421--
Q ss_pred HHHHHCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCCHHHHHCCCEEECC-CCCHHHHH
Q ss_conf 9965067399809000999999997769999999599569787862994-299057408898404988616-99227999
Q 002765 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTE-PGLSVIIS 635 (883)
Q Consensus 558 ~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-gIa~~~~~~~a~~aad~vl~~-~~~~~i~~ 635 (883)
.....+..-.|.--.+..+.+.-....+.||||..+|+.|=+.|++ +|.+..|... ...+..... .++..+..
T Consensus 122 ---~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~--~~~~~~~~~~~~~~e~~d 196 (209)
T d2o2xa1 122 ---IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAA--VQPGFAIRPLRDSSELGD 196 (209)
T ss_dssp ---CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCE--EETTEEEEEESSHHHHHH
T ss_pred ---CCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCC--CCCCCCCCCCCCHHHHHH
T ss_conf ---236640243201566767773899412689579788999999879948999489976--567755467630527879
Q ss_pred HHHH
Q ss_conf 9999
Q 002765 636 AVLT 639 (883)
Q Consensus 636 ~i~~ 639 (883)
++..
T Consensus 197 ll~~ 200 (209)
T d2o2xa1 197 LLAA 200 (209)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=89.37 E-value=0.46 Score=21.79 Aligned_cols=59 Identities=25% Similarity=0.256 Sum_probs=39.4
Q ss_pred EECCCCHHHHHHHHHHCCCEEEEECCCCC-CHHHHHHCCE-EEEECCC---CHHHHHC---CCEEEC
Q ss_conf 80900099999999776999999959956-9787862994-2990574---0889840---498861
Q 002765 568 GVFPEHKYEIVKRLQERKHICGMTGDGVN-DAPALKKADI-GIAVADA---TDAARSA---SDIVLT 626 (883)
Q Consensus 568 r~~p~~K~~iv~~l~~~g~~v~~iGDg~N-D~~al~~Adv-gIa~~~~---~~~a~~a---ad~vl~ 626 (883)
.-+|+--....+.++-..+.++||||..+ |+.+-++|++ +|.+..| .+...+. .|+++.
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~ 246 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLS 246 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEES
T ss_pred CCCCCCCEEHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEEC
T ss_conf 6774200110011034545169982780777999998799799989899997888636899988989
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.61 E-value=0.21 Score=24.42 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=66.1
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCC----HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEE
Q ss_conf 999786999999996799199994796----4899999999099989888876447630012592008999650673998
Q 002765 493 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (883)
Q Consensus 493 ~lr~~~~~~I~~l~~~gi~v~i~TGD~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (883)
.+.|++.+.++.|+++|+++.++|+-. ...........|+.... ..+.+.+.. -...
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f---d~i~~s~~~----------------~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF---DFLIESCQV----------------GMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC---SEEEEHHHH----------------SCCT
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHH---CEEEEHHHC----------------CCCC
T ss_conf 888009999999986599457752011111899999998746807551---110005441----------------3779
Q ss_pred ECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCCHHHHH
Q ss_conf 09000999999997769999999599569787862994-2990574088984
Q 002765 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARS 619 (883)
Q Consensus 569 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-gIa~~~~~~~a~~ 619 (883)
-.|+--....+.++-..+.+.||||..+|+.+-+.|++ +|.+.++.+...+
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHH
T ss_conf 9827777888872898632899977988799999859989998994048999
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