Citrus Sinensis ID: 002775
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 882 | ||||||
| 343887278 | 911 | aminopeptidase [Citrus unshiu] | 0.944 | 0.914 | 0.844 | 0.0 | |
| 225429582 | 880 | PREDICTED: puromycin-sensitive aminopept | 0.993 | 0.995 | 0.816 | 0.0 | |
| 147772895 | 880 | hypothetical protein VITISV_012143 [Viti | 0.993 | 0.995 | 0.813 | 0.0 | |
| 255550101 | 870 | puromycin-sensitive aminopeptidase, puta | 0.986 | 1.0 | 0.789 | 0.0 | |
| 356507019 | 873 | PREDICTED: puromycin-sensitive aminopept | 0.989 | 1.0 | 0.774 | 0.0 | |
| 357465783 | 876 | Puromycin-sensitive aminopeptidase [Medi | 0.993 | 1.0 | 0.765 | 0.0 | |
| 356514669 | 873 | PREDICTED: puromycin-sensitive aminopept | 0.989 | 1.0 | 0.768 | 0.0 | |
| 297798638 | 879 | hypothetical protein ARALYDRAFT_491378 [ | 0.988 | 0.992 | 0.762 | 0.0 | |
| 22329112 | 879 | aminopeptidase M1 [Arabidopsis thaliana] | 0.988 | 0.992 | 0.763 | 0.0 | |
| 449486688 | 886 | PREDICTED: LOW QUALITY PROTEIN: puromyci | 0.993 | 0.988 | 0.752 | 0.0 |
| >gi|343887278|dbj|BAK61824.1| aminopeptidase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1572 bits (4071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 811/960 (84%), Positives = 816/960 (85%), Gaps = 127/960 (13%)
Query: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN
Sbjct: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
Query: 61 RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
RSVSFTNK SSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR
Sbjct: 61 RSVSFTNKASSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
Query: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK
Sbjct: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
Query: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSD----------GIKVRVYCQVGKA 230
VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSD GIKVRVYCQVGKA
Sbjct: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGTVTISIDSHGIKVRVYCQVGKA 240
Query: 231 NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD 290
NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD
Sbjct: 241 NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD 300
Query: 291 QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI 350
QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI
Sbjct: 301 QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI 360
Query: 351 WTQFLDECTEGLRLDGLAESHPIEHIGSFQVEVNHTGEIDEIFDAISYRKGASVIRMLQN 410
WTQFLDECTEGLRLDGLAESHPIE VEVNHTGEIDEIFDAISYRKGASVIRMLQN
Sbjct: 361 WTQFLDECTEGLRLDGLAESHPIE------VEVNHTGEIDEIFDAISYRKGASVIRMLQN 414
Query: 411 YLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKV 470
YLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKV
Sbjct: 415 YLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKV 474
Query: 471 KEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSIS 530
+EEKLELEQ LGCSIS
Sbjct: 475 REEKLELEQEL-------------------------------------------LGCSIS 491
Query: 531 KEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQ 590
KEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIE KQLSETDRFGILDDHFALCMARQ
Sbjct: 492 KEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQ 551
Query: 591 QTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAE 650
QTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAE
Sbjct: 552 QTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAE 611
Query: 651 -----KLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPP 705
KLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPP
Sbjct: 612 LFICRKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPP 671
Query: 706 DIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNF 765
DIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNF
Sbjct: 672 DIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNF 731
Query: 766 LLSSEVRSQDAVYGLAVSIEGRETAWKWLKD--------NWDHI---------------- 801
LLSSEVRSQDAVYGLAVSIEGRETAWKWLK N+D I
Sbjct: 732 LLSSEVRSQDAVYGLAVSIEGRETAWKWLKASGVLSKEVNFDPIPSSINGRISSITGTTS 791
Query: 802 -------------------------SKTWGSGFLITRFISSIVSP--------------F 822
S+ S F + +S V P F
Sbjct: 792 QRPGVLVFLSHALSAQLSHRFVVYTSQIMCSVFQLLHMCTSNVFPLIPFLFLSAVWHAQF 851
Query: 823 ASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY 882
ASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
Sbjct: 852 ASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY 911
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Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429582|ref|XP_002280239.1| PREDICTED: puromycin-sensitive aminopeptidase [Vitis vinifera] gi|296081675|emb|CBI20680.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147772895|emb|CAN73668.1| hypothetical protein VITISV_012143 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255550101|ref|XP_002516101.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] gi|223544587|gb|EEF46103.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356507019|ref|XP_003522269.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357465783|ref|XP_003603176.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] gi|355492224|gb|AES73427.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356514669|ref|XP_003526026.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297798638|ref|XP_002867203.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] gi|297313039|gb|EFH43462.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|22329112|ref|NP_195035.2| aminopeptidase M1 [Arabidopsis thaliana] gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] gi|24209879|gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] gi|110742477|dbj|BAE99157.1| aminopeptidase like protein [Arabidopsis thaliana] gi|332660772|gb|AEE86172.1| aminopeptidase M1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449486688|ref|XP_004157369.1| PREDICTED: LOW QUALITY PROTEIN: puromycin-sensitive aminopeptidase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 882 | ||||||
| TAIR|locus:2125904 | 879 | APM1 "aminopeptidase M1" [Arab | 0.988 | 0.992 | 0.747 | 0.0 | |
| ZFIN|ZDB-GENE-060524-3 | 925 | npepps "aminopeptidase puromyc | 0.956 | 0.912 | 0.450 | 3e-188 | |
| FB|FBgn0261243 | 1075 | Psa "Puromycin sensitive amino | 0.944 | 0.774 | 0.436 | 4.1e-184 | |
| MGI|MGI:1101358 | 920 | Npepps "aminopeptidase puromyc | 0.947 | 0.908 | 0.442 | 3.4e-180 | |
| UNIPROTKB|E1BP91 | 921 | NPEPPS "Uncharacterized protei | 0.948 | 0.908 | 0.440 | 7e-180 | |
| UNIPROTKB|E9PLK3 | 915 | NPEPPS "Puromycin-sensitive am | 0.948 | 0.914 | 0.442 | 7e-180 | |
| UNIPROTKB|P55786 | 919 | NPEPPS "Puromycin-sensitive am | 0.948 | 0.910 | 0.442 | 7e-180 | |
| UNIPROTKB|F1M9V7 | 920 | Npepps "Protein Npepps" [Rattu | 0.947 | 0.908 | 0.442 | 7e-180 | |
| UNIPROTKB|F1RWJ6 | 923 | LOC414413 "Uncharacterized pro | 0.948 | 0.906 | 0.438 | 2.7e-178 | |
| UNIPROTKB|F1P456 | 837 | NPEPPS "Uncharacterized protei | 0.908 | 0.956 | 0.445 | 4e-177 |
| TAIR|locus:2125904 APM1 "aminopeptidase M1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3455 (1221.3 bits), Expect = 0., P = 0.
Identities = 660/883 (74%), Positives = 752/883 (85%)
Query: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
M++FKG+PRLPKFAVPKRYD+RL PDL +C F G+VAID+D+V DT+FIVLNAADL++N+
Sbjct: 1 MDQFKGEPRLPKFAVPKRYDLRLNPDLIACTFTGTVAIDLDIVADTRFIVLNAADLSVND 60
Query: 61 RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
SVSFT SSKAL KV L E DEILVLEF E LP G+GVL +GF GVLNDKMKGFYR
Sbjct: 61 ASVSFTPPSSSKALAAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYR 120
Query: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
S+YE NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL+VP++LVALSNMP+++EK
Sbjct: 121 STYEHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEK 180
Query: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240
V+GN+K VSYQESPIMSTYLVA+V+GLFDYVEDHTSDGIKVRVYCQVGKA+QGKFAL+V
Sbjct: 181 VNGNLKIVSYQESPIMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVG 240
Query: 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQR 300
KTL+L+KEYFAVPY LPK+DMIAIPDFAAGAMENYGLVTYRETALLYD+QHSAA+NKQR
Sbjct: 241 AKTLDLFKEYFAVPYPLPKMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQR 300
Query: 301 VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTE 360
VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLA DSLFPEWKIWTQFLDE TE
Sbjct: 301 VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTE 360
Query: 361 GLRLDGLAESHPIEHIGSFQVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRS 420
GLRLDGL ESHPIE VEVNH EIDEIFDAISYRKGASVIRMLQ+YLGAE FQ+S
Sbjct: 361 GLRLDGLEESHPIE------VEVNHAAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKS 414
Query: 421 LASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVIXXXXXXXXXXXXXX 480
LA+YIK +A SNAKTEDLWAALE GSGEPVNKLM+SWTKQKGYPV+
Sbjct: 415 LAAYIKNHAYSNAKTEDLWAALEAGSGEPVNKLMSSWTKQKGYPVVSAKIKDGKLELEQS 474
Query: 481 XXXXXGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGD--NG-- 536
GSPG+GQWIVP+TLCCGSY+ KNFLL +KS ++D+KELLGCSI+ D NG
Sbjct: 475 RFLSSGSPGEGQWIVPVTLCCGSYEKRKNFLLESKSGAYDLKELLGCSIADGSDKINGTC 534
Query: 537 GWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSL 596
WIK+NV+Q GFYRVKYD LAA L A E + L+ DR+GILDD FAL MARQQ+L SL
Sbjct: 535 SWIKINVDQAGFYRVKYDDSLAAGLRNATESQSLTSIDRYGILDDSFALTMARQQSLASL 594
Query: 597 LTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDS 656
LTL ++Y +E +YTVLSNLI ISYK+ +I ADA EL+ +K FFI +FQ +A KLGWD
Sbjct: 595 LTLCSAYKKELDYTVLSNLIAISYKVVKIGADANQELMSGIKHFFIGVFQFAAGKLGWDP 654
Query: 657 KPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVM 716
K GESHLDA+LRGE+ TALA+ GH ETL EA +RF AFLADR TPLLPPDIR+AAYVAVM
Sbjct: 655 KQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLADRNTPLLPPDIRRAAYVAVM 714
Query: 717 QKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDA 776
Q+ + SD+SGYESLLRVYRETDLSQEKTRIL SLASCPD IV +VLNF+LS EVR+QDA
Sbjct: 715 QRANKSDKSGYESLLRVYRETDLSQEKTRILGSLASCPDPTIVQDVLNFVLSDEVRNQDA 774
Query: 777 VYGLA-VSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFF 835
+YGL+ VS EGRE AWKWL++ W++I TWGSGFLITRFIS++VSPFAS+EK +EVEEFF
Sbjct: 775 LYGLSGVSWEGREVAWKWLQEKWEYIGNTWGSGFLITRFISAVVSPFASFEKAKEVEEFF 834
Query: 836 SSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELA 878
++R KP +ARTL+QSIERV INA WVESI+ E +L + V +L+
Sbjct: 835 ATRSKPSMARTLKQSIERVHINANWVESIKKEDNLTQLVAQLS 877
|
|
| ZFIN|ZDB-GENE-060524-3 npepps "aminopeptidase puromycin sensitive" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0261243 Psa "Puromycin sensitive aminopeptidase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1101358 Npepps "aminopeptidase puromycin sensitive" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BP91 NPEPPS "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E9PLK3 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P55786 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1M9V7 Npepps "Protein Npepps" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RWJ6 LOC414413 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P456 NPEPPS "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 882 | |||
| cd09601 | 446 | cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f | 0.0 | |
| pfam01433 | 390 | pfam01433, Peptidase_M1, Peptidase family M1 | 1e-169 | |
| COG0308 | 859 | COG0308, PepN, Aminopeptidase N [Amino acid transp | 1e-154 | |
| cd09602 | 438 | cd09602, M1_APN_3, Peptidase M1 family containing | 6e-93 | |
| TIGR02412 | 831 | TIGR02412, pepN_strep_liv, aminopeptidase N, Strep | 2e-70 | |
| cd09603 | 415 | cd09603, M1_APN_4, Peptidase M1 family Aminopeptid | 9e-70 | |
| cd09595 | 407 | cd09595, M1, Peptidase M1 family contains aminopep | 2e-66 | |
| pfam11838 | 323 | pfam11838, DUF3358, Domain of unknown function (DU | 2e-60 | |
| TIGR02414 | 863 | TIGR02414, pepN_proteo, aminopeptidase N, Escheric | 1e-36 | |
| cd09600 | 861 | cd09600, M1_APN_1, Peptidase M1 family containing | 1e-32 | |
| cd09599 | 442 | cd09599, M1_LTA4H, Peptidase M1 family contains le | 2e-29 | |
| cd09604 | 435 | cd09604, M1_APN_5, Peptidase M1 family containing | 6e-29 | |
| TIGR02411 | 602 | TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrola | 1e-26 | |
| pfam13485 | 128 | pfam13485, Peptidase_MA_2, Peptidase MA superfamil | 3e-18 | |
| cd09839 | 507 | cd09839, M1_TAF2, TATA binding protein (TBP) assoc | 4e-17 | |
| PRK14015 | 875 | PRK14015, pepN, aminopeptidase N; Provisional | 2e-16 | |
| cd09594 | 125 | cd09594, GluZincin, Peptidase Gluzincin family (th | 4e-05 |
| >gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ) | Back alignment and domain information |
|---|
Score = 693 bits (1791), Expect = 0.0
Identities = 249/452 (55%), Positives = 309/452 (68%), Gaps = 12/452 (2%)
Query: 18 RYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPT 77
YD+ LTPDL + F GSV I ++V T IVL+A DLTI + +V+ + L
Sbjct: 2 HYDLTLTPDLDNFTFSGSVTITLEVTEPTNEIVLHAKDLTITSATVTVGG-GNVDILVTI 60
Query: 78 KVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQ 136
++ L+ TL G L I F G LND ++GFYRSSY + GE + +A TQ
Sbjct: 61 TYSEENEFLVITLDEPLTLAGGNYTLTIEFTGELNDDLRGFYRSSYTDNGGETRYLAATQ 120
Query: 137 FEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKV-DGNMKTVSYQESPI 195
FEP DARR FPC+DEPA KATF IT+ P+ ALSNMPV E+V KT ++ +P
Sbjct: 121 FEPTDARRAFPCFDEPAFKATFTITITHPAGYTALSNMPVESEEVLGDGWKTTEFETTPP 180
Query: 196 MSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPY 255
MSTYLVA V+G FDYVE T +G+ VRVY + GK QG +AL VA K LE +++YF +PY
Sbjct: 181 MSTYLVAFVVGDFDYVEGTTKNGVPVRVYARPGKIEQGDYALEVAPKILEFFEDYFGIPY 240
Query: 256 SLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315
LPKLD++AIPDFAAGAMEN+GL+TYRETALLYD + S+A+NKQRVATVVAHELAHQWFG
Sbjct: 241 PLPKLDLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASNKQRVATVVAHELAHQWFG 300
Query: 316 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQF-LDECTEGLRLDGLAESHPIE 374
NLVTM+WW LWLNEGFAT++ YL D L PEW +W QF LD+ L LD LA SHPI
Sbjct: 301 NLVTMKWWDDLWLNEGFATYMEYLGVDHLEPEWNMWDQFVLDDLQSALALDSLASSHPIS 360
Query: 375 HIGSFQVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAK 434
V V EI EIFDAISY KGASV+RML+++LG E F++ L +Y+KK+A NA
Sbjct: 361 ------VPVETPDEISEIFDAISYSKGASVLRMLEHFLGEEVFRKGLRNYLKKHAYGNAT 414
Query: 435 TEDLWAALEE--GSGEPVNKLMNSWTKQKGYP 464
T+DLW AL E G+ V ++M++WT Q GYP
Sbjct: 415 TDDLWEALSEASKLGKDVKEIMDTWTLQPGYP 446
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This M1 peptidase family includes eukaryotic and bacterial members: aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease, consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1 also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP) or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 446 |
| >gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1 | Back alignment and domain information |
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| >gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N | Back alignment and domain information |
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| >gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type | Back alignment and domain information |
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| >gnl|CDD|189010 cd09603, M1_APN_4, Peptidase M1 family Aminopeptidase N | Back alignment and domain information |
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| >gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase | Back alignment and domain information |
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| >gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) | Back alignment and domain information |
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| >gnl|CDD|233858 TIGR02414, pepN_proteo, aminopeptidase N, Escherichia coli type | Back alignment and domain information |
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| >gnl|CDD|189007 cd09600, M1_APN_1, Peptidase M1 family containing Aminopeptidase N | Back alignment and domain information |
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| >gnl|CDD|189006 cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4 hydrolase | Back alignment and domain information |
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| >gnl|CDD|189011 cd09604, M1_APN_5, Peptidase M1 family containing bacterial Aminopeptidase N | Back alignment and domain information |
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| >gnl|CDD|233856 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrolase/aminopeptidase | Back alignment and domain information |
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| >gnl|CDD|222169 pfam13485, Peptidase_MA_2, Peptidase MA superfamily | Back alignment and domain information |
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| >gnl|CDD|189018 cd09839, M1_TAF2, TATA binding protein (TBP) associated factor 2 | Back alignment and domain information |
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| >gnl|CDD|237585 PRK14015, pepN, aminopeptidase N; Provisional | Back alignment and domain information |
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| >gnl|CDD|189001 cd09594, GluZincin, Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins) | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 882 | |||
| KOG1046 | 882 | consensus Puromycin-sensitive aminopeptidase and r | 100.0 | |
| TIGR02412 | 831 | pepN_strep_liv aminopeptidase N, Streptomyces livi | 100.0 | |
| COG0308 | 859 | PepN Aminopeptidase N [Amino acid transport and me | 100.0 | |
| TIGR02414 | 863 | pepN_proteo aminopeptidase N, Escherichia coli typ | 100.0 | |
| PRK14015 | 875 | pepN aminopeptidase N; Provisional | 100.0 | |
| TIGR02411 | 601 | leuko_A4_hydro leukotriene A-4 hydrolase/aminopept | 100.0 | |
| PF01433 | 390 | Peptidase_M1: Peptidase family M1 This is family M | 100.0 | |
| KOG1047 | 613 | consensus Bifunctional leukotriene A4 hydrolase/am | 100.0 | |
| PF11838 | 324 | ERAP1_C: ERAP1-like C-terminal domain; InterPro: I | 100.0 | |
| KOG1932 | 1180 | consensus TATA binding protein associated factor [ | 100.0 | |
| COG3975 | 558 | Predicted protease with the C-terminal PDZ domain | 99.31 | |
| PF13485 | 128 | Peptidase_MA_2: Peptidase MA superfamily | 99.15 | |
| PF10460 | 366 | Peptidase_M30: Peptidase M30; InterPro: IPR019501 | 97.74 | |
| PF11940 | 367 | DUF3458: Domain of unknown function (DUF3458); Int | 96.38 | |
| PF05299 | 122 | Peptidase_M61: M61 glycyl aminopeptidase; InterPro | 96.33 | |
| PF04450 | 205 | BSP: Peptidase of plants and bacteria; InterPro: I | 96.09 | |
| PF07607 | 128 | DUF1570: Protein of unknown function (DUF1570); In | 95.87 | |
| PF10026 | 195 | DUF2268: Predicted Zn-dependent protease (DUF2268) | 91.25 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 90.68 | |
| PRK04860 | 160 | hypothetical protein; Provisional | 89.46 | |
| COG4324 | 376 | Predicted aminopeptidase [General function predict | 84.74 | |
| PF01863 | 205 | DUF45: Protein of unknown function DUF45; InterPro | 83.73 | |
| PF10023 | 337 | DUF2265: Predicted aminopeptidase (DUF2265); Inter | 83.06 | |
| smart00731 | 146 | SprT SprT homologues. Predicted to have roles in t | 81.13 |
| >KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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Probab=100.00 E-value=4.7e-153 Score=1373.44 Aligned_cols=845 Identities=48% Similarity=0.778 Sum_probs=778.0
Q ss_pred CCCCCCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEecCceeeEEEEeeccCCCCccccceeEEEecC
Q 002775 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEA 84 (882)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (882)
...+|||++|+|+||+|.|.+++....|.|++.|.+.+.++|+.|+||+.++.|.++.+.....................
T Consensus 26 ~~~~rLP~~v~P~~Y~l~l~~~l~~~~f~G~v~I~l~v~~~t~~i~Lh~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (882)
T KOG1046|consen 26 PNEYRLPTNVVPLHYDLTLKPDLEEFTFTGSVKISLEVSEATRFIVLHAKDLKITSASLVSRPSSGSVQLEVSVEEKEQE 105 (882)
T ss_pred cccccCCCCCCCceeEEEEecCCcCCcceeEEEEEEEEecccCEEEEEhhhccceeEEEEecCCCCcccccccccccccc
Confidence 36789999999999999999999999999999999999999999999999999999998653221111111111111111
Q ss_pred CeEEEEEeCCccCCc-eEEEEEEEEeeeCCCCceeEEeeecc-CCeeeeeeeccCCCCCCCceeeccCCCCCceEEEEEE
Q 002775 85 DEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL 162 (882)
Q Consensus 85 ~~~l~i~~~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l~i 162 (882)
+.+.+.+++++.+| +|+|+|.|.|.+++++.|||+++|.+ .+.++++++|||||++||++|||||||++||+|.|+|
T Consensus 106 -~~l~~~~~~~l~~~~~y~L~i~f~g~l~~~~~G~y~s~y~~~~~~~~~~~~Tqfept~AR~~FPCfDeP~~KAtF~Itl 184 (882)
T KOG1046|consen 106 -ETLVFPLNETLLAGSSYTLTIEFTGKLNDSSEGFYRSSYTDSEGSEKSIAATQFEPTDARRAFPCFDEPAFKATFTITL 184 (882)
T ss_pred -eEEEEEcccccccCCeEEEEEEEeEeecCCcceeeeecccCCCCceEEEEEeccCccchhhcCCCCCcccccCceEEEE
Confidence 67888999999999 89999999999999999999999987 5666999999999999999999999999999999999
Q ss_pred EeCCCCeEeecCCccce-eecCCeEEEEEEcCCCccceEEEEEEecceeeeccccCCeEEEEEEcCCchhhHHHHHHHHH
Q 002775 163 DVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAV 241 (882)
Q Consensus 163 ~~p~~~~a~sn~~~~~~-~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~~ 241 (882)
.||++++|+||||+.++ ..++++++++|++||+||||++||+||+|++.+..+.+|+++++|++|+...+++++++.++
T Consensus 185 ~hp~~~~aLSNm~v~~~~~~~~~~~~~~F~~Tp~MstYLvAf~V~~f~~~e~~~~~~v~vrv~a~p~~~~~~~~al~~~~ 264 (882)
T KOG1046|consen 185 VHPKGYTALSNMPVIKEEPVDDGWKTTTFEKTPKMSTYLVAFAVGDFVYVETITKSGVPVRVYARPEKINQGQFALEVAT 264 (882)
T ss_pred EecCCceEeecCcccccccccCCeeEEEEEecCCCchhhheeeeeccccceeecCCCceEEEEeChHHhhHHHHHHHHHH
Confidence 99999999999999876 45555999999999999999999999999999988888999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCcceeecCCCCCcccccccceeeecccccccCCCCcHHHHHHHHHHHHHHHHHHHhcCccccc
Q 002775 242 KTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTME 321 (882)
Q Consensus 242 ~~l~~~e~~~g~~yP~~k~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~ 321 (882)
++|+||+++||+|||+||+|+|++|+|..|||||||||+|+|..+|+++..++..++++++.+||||+|||||||+|||+
T Consensus 265 ~~L~~~e~~f~i~yPLpK~D~iavPdf~~GAMENwGLvtyre~~lL~~~~~ss~~~k~~va~vIaHElAHQWFGNLVTm~ 344 (882)
T KOG1046|consen 265 KVLEFYEDYFGIPYPLPKLDLVAVPDFSAGAMENWGLVTYRETALLYDPQTSSSSNKQRVAEVIAHELAHQWFGNLVTMK 344 (882)
T ss_pred HHHHHHHHHhCCCCCCccccEEecCCccccchhcCcceeeeehhhccCCCcCcHHHHHHHHHHHHHHHHHHHhcCcccHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhHHHHHHHHHHhhhCcchhHHHHHHHHHH-HHHhhhcccCCccccccCccceecCCccccccccccccccc
Q 002775 322 WWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEHIGSFQVEVNHTGEIDEIFDAISYRK 400 (882)
Q Consensus 322 ~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~~~~~~~~~~~~~~~~~f~~i~Y~K 400 (882)
||+|+|||||||+|+++++++..+|+|..+++++...+ .++..|++.++||+. .++.++.+|.+.||.|+|.|
T Consensus 345 wW~dLWLnEGfAt~~~~~~v~~~~p~~~~~~~~~~~~l~~~l~~D~l~~shpi~------~~v~~~~ei~e~fd~i~Y~K 418 (882)
T KOG1046|consen 345 WWNDLWLNEGFATYVEYLAVDHLFPEWDIWEQFLLENLERVLSLDALASSHPIS------VPVESPSEIDEIFDEISYQK 418 (882)
T ss_pred hhhhhhhcccHHHHHHHHhhccCCcchhhHHHHHHHHHHHHhhhhcccccCCee------eecCCcchhhhhhhhhhhhH
Confidence 99999999999999999999999999999999887777 579999999999999 99999999999999999999
Q ss_pred hhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHhhhcCCCcceEEEEEeCcEEEEEEE
Q 002775 401 GASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQS 480 (882)
Q Consensus 401 ga~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~d~~~~l~~~sg~~l~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~ 480 (882)
|++|+|||+..+|++.|++||+.||.+|+|+|++++|||++|+...+.+++++|+.|+.|+|||+|+|.++++.++++|+
T Consensus 419 GasvlRML~~~lGe~~F~~gi~~yL~~~~y~na~~~DLw~~l~~~~~~~v~~~M~~Wt~Q~G~Pvv~V~~~~~~~~l~Q~ 498 (882)
T KOG1046|consen 419 GASVLRMLESLLGEEVFRKGLRSYLKKHQYSNAKTEDLWDALEEGSGLDVSELMDTWTKQMGYPVVTVERNGDSLTLTQE 498 (882)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHhccCCCCchhHHHHHhccCCCCHHHHHhhhhcCCCCceEEEEecCCEEEEehh
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred eeccCCC--CCCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCceEEeCcCceeEEEEEcCHHHH
Q 002775 481 QFLSSGS--PGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLA 558 (882)
Q Consensus 481 rf~~~~~--~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w 558 (882)
||..... .....|+||++|.+.+.+.....++..++.++.++. .+ +||++|.++.|||||+||+++|
T Consensus 499 rf~~~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~--~wi~~N~~~~g~yRV~Yd~~~w 567 (882)
T KOG1046|consen 499 RFLSDPDPSEDNYLWWIPLTYTTSGSGSVPKFWLSSKSTTIKLPE---------SD--QWIKVNLEQTGYYRVNYDDENW 567 (882)
T ss_pred hhccCCCccccCcccceeEEEEcCCCCccceeeecCCCcceecCC---------CC--eEEEEeCCcceEEEEEeCHHHH
Confidence 9998764 234599999999987665445677887777777753 33 6999999999999999999999
Q ss_pred HHHHHHHHc-cCCChhhHHHHHHHHHHHHHhccCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHhccChHHHHHH
Q 002775 559 ARLGYAIEM-KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYL 637 (882)
Q Consensus 559 ~~l~~~L~~-~~i~~~~ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~ 637 (882)
+.|+++|.. ..+++.+|++||+|+|+|+++|+++++.+|+++.||.+|++|.||..++..|..+.. +.. .+.+..+
T Consensus 568 ~~l~~~l~~~~~~~~~~Ra~li~D~~~la~~~~~~~~~~l~l~~~l~~e~~~~p~~~~~~~l~~~~~-~~~--~~~~~~~ 644 (882)
T KOG1046|consen 568 ALLIEQLKNHESLSVIDRAQLINDAFALARAGRLPYSIALNLISYLKNETDYVPWSAAIRSLYKLHS-LED--TEIYSKF 644 (882)
T ss_pred HHHHHHHhhcCccCHhHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcccccchHHHHHHHHHHHhh-ccc--chHHHHH
Confidence 999999976 789999999999999999999999999999999999999999999999999999888 444 5688999
Q ss_pred HHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCCcchhhhhheeeee
Q 002775 638 KQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQ 717 (882)
Q Consensus 638 ~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~ 717 (882)
+.|+++++.++++++||.....++ ....+|..++..||..|+++|.+.|..+|+.|+.+ ++.+|+++|.+|||.++
T Consensus 645 ~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~~a~~~f~~~~~~--~~~ip~~lr~~vy~~~~- 720 (882)
T KOG1046|consen 645 KEFVKKLILPIFEKLGWSDGADSS-LDNMLRVSVLSFACRFGHEECLKKAVELFRQWLAG--TNPIPPDLREVVYCTAV- 720 (882)
T ss_pred HHHHHHHHHHHHHHhcCCccccch-hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhc--CCCCChhhhhhhhhHHH-
Confidence 999999999999999998754443 77899999999999999999999999999999987 78899999998887655
Q ss_pred ecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhcc-CcCCcccceeeee-eccc--cHHHHHHH
Q 002775 718 KVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS-SEVRSQDAVYGLA-VSIE--GRETAWKW 793 (882)
Q Consensus 718 ~v~~g~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~-~~i~~qd~~~~~~-v~~~--g~~~~~~f 793 (882)
++|+++.|++++++|+++....||..+++||+|+++++.++++|++.++ ..++.||....+. ++.| |..+||+|
T Consensus 721 --~~g~~~~w~~~~~~y~~~~~~~e~~~~l~al~~~~~~~~l~~~l~~~~~~~~v~~qd~~~~~~~~~~~~~g~~~a~~~ 798 (882)
T KOG1046|consen 721 --QFGTEEDWEQLLELYKKETTAAEKRKLLNALSCSKDPWLLQRLLDLAFDAENVRDQDVLTLLQGISGNPRGVELAWKF 798 (882)
T ss_pred --HhcCHhHHHHHHHHHhccccHHHHHHHHHHhccCccHHHHHHHHHHhcccccccchhHHHHHHHHhcCcccHHHHHHH
Confidence 5899999999999999999999999999999999999999999999888 4699999999988 7776 99999999
Q ss_pred HHHHHHHHHHHhCCCcchHHHHHHhhccCCCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcChhHHHHH
Q 002775 794 LKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEA 873 (882)
Q Consensus 794 l~~n~~~i~~~~~~~~~l~~~i~~~~~~~~t~~~l~~~~~Ff~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~w 873 (882)
+..||+.+.++|++.+.+.+++..++..+.++.+++++++||...+..+..+++++++|+++.|+.|.+++.+. +.+|
T Consensus 799 ~~~n~~~l~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~le~~~~ni~W~~~~~~~--l~~~ 876 (882)
T KOG1046|consen 799 LQDNWKELLNRYGNNFELSRLISFITEPFATEEKLDEVEKFFADIPKTGAERALQQALETVKANIQWVERNEEN--LTQW 876 (882)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhhhhHHHhhHHH--HHHH
Confidence 99999999999996688999999999999999999999999998876666899999999999999999999999 9999
Q ss_pred HHHhh
Q 002775 874 VKELA 878 (882)
Q Consensus 874 l~~~~ 878 (882)
|.+..
T Consensus 877 l~~~~ 881 (882)
T KOG1046|consen 877 LLEAL 881 (882)
T ss_pred HHHhc
Confidence 98753
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| >TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type | Back alignment and domain information |
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| >COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] | Back alignment and domain information |
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| >TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type | Back alignment and domain information |
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| >PRK14015 pepN aminopeptidase N; Provisional | Back alignment and domain information |
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| >TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase | Back alignment and domain information |
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| >PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification | Back alignment and domain information |
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| >KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism] | Back alignment and domain information |
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| >PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] | Back alignment and domain information |
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| >KOG1932 consensus TATA binding protein associated factor [Transcription] | Back alignment and domain information |
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| >COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only] | Back alignment and domain information |
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| >PF13485 Peptidase_MA_2: Peptidase MA superfamily | Back alignment and domain information |
|---|
| >PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
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| >PF11940 DUF3458: Domain of unknown function (DUF3458); InterPro: IPR024601 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF05299 Peptidase_M61: M61 glycyl aminopeptidase; InterPro: IPR007963 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] | Back alignment and domain information |
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| >PF07607 DUF1570: Protein of unknown function (DUF1570); InterPro: IPR011464 This entry represents hypothetical proteins confined to bacteria | Back alignment and domain information |
|---|
| >PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >PRK04860 hypothetical protein; Provisional | Back alignment and domain information |
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| >COG4324 Predicted aminopeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori | Back alignment and domain information |
|---|
| >PF10023 DUF2265: Predicted aminopeptidase (DUF2265); InterPro: IPR014553 This group represents a predicted aminopeptidase | Back alignment and domain information |
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| >smart00731 SprT SprT homologues | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 882 | ||||
| 3se6_A | 967 | Crystal Structure Of The Human Endoplasmic Reticulu | 1e-127 | ||
| 4e36_A | 967 | Crystal Structure Of The Human Endoplasmic Reticulu | 1e-126 | ||
| 4fke_A | 909 | Crystal Structure Of Porcine Aminopeptidase-N Lengt | 1e-119 | ||
| 4h5h_A | 908 | Crystal Structure Of Porcine Aminopeptidase-N Compl | 1e-119 | ||
| 4f5c_A | 959 | Crystal Structure Of The Spike Receptor Binding Dom | 1e-119 | ||
| 4hol_A | 908 | Crystal Structure Of Porcine Aminopeptidase-N Compl | 1e-118 | ||
| 3qnf_A | 954 | Crystal Structure Of The Open State Of Human Endopl | 1e-117 | ||
| 2yd0_A | 897 | Crystal Structure Of The Soluble Domain Of Human En | 1e-117 | ||
| 3mdj_A | 921 | Er Aminopeptidase, Erap1, Bound To The Zinc Aminope | 1e-116 | ||
| 4fyq_A | 903 | Human Aminopeptidase N (Cd13) Length = 903 | 1e-115 | ||
| 3q7j_A | 780 | Engineered Thermoplasma Acidophilum F3 Factor Mimic | 1e-103 | ||
| 1z1w_A | 780 | Crystal Structures Of The Tricorn Interacting Facor | 1e-103 | ||
| 3ebg_A | 889 | Structure Of The M1 Alanylaminopeptidase From Malar | 1e-30 | ||
| 3ebi_A | 890 | Structure Of The M1 Alanylaminopeptidase From Malar | 1e-30 | ||
| 3q43_A | 891 | X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin | 1e-30 | ||
| 3t8v_A | 895 | A Bestatin-Based Chemical Biology Strategy Reveals | 3e-30 | ||
| 3u9w_A | 608 | Structure Of Human Leukotriene A4 Hydrolase In Comp | 4e-23 | ||
| 2r59_A | 616 | Leukotriene A4 Hydrolase Complexed With Inhibitor R | 5e-23 | ||
| 3cho_A | 610 | Crystal Structure Of Leukotriene A4 Hydrolase In Co | 5e-23 | ||
| 1hs6_A | 611 | Structure Of Leukotriene A4 Hydrolase Complexed Wit | 5e-23 | ||
| 1sqm_A | 610 | Structure Of [r563a] Leukotriene A4 Hydrolase Lengt | 6e-23 | ||
| 1h19_A | 611 | Structure Of [e271q] Leukotriene A4 Hydrolase Lengt | 1e-22 | ||
| 1gw6_A | 610 | Structure Of Leukotriene A4 Hydrolase D375n Mutant | 1e-22 | ||
| 3b7s_A | 616 | [e296q]lta4h In Complex With Rsr Substrate Length = | 1e-22 | ||
| 2hpo_A | 891 | Structure Of Aminopeptidase N From E. Coli Suggests | 1e-21 | ||
| 2dq6_A | 870 | Crystal Structure Of Aminopeptidase N From Escheric | 1e-21 | ||
| 3puu_A | 891 | Crystal Structure Of Glu121gln Mutant Of E. Coli Am | 3e-21 | ||
| 2xq0_A | 632 | Structure Of Yeast Lta4 Hydrolase In Complex With B | 2e-18 | ||
| 2xpy_A | 632 | Structure Of Native Leukotriene A4 Hydrolase From S | 4e-18 | ||
| 3cia_A | 605 | Crystal Structure Of Cold-Aminopeptidase From Colwe | 7e-18 | ||
| 2gtq_A | 867 | Crystal Structure Of Aminopeptidase N From Human Pa | 2e-17 | ||
| 3rjo_A | 419 | Crystal Structure Of Erap1 Peptide Binding Domain L | 7e-16 |
| >pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 | Back alignment and structure |
|
| >pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 | Back alignment and structure |
| >pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 | Back alignment and structure |
| >pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 | Back alignment and structure |
| >pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 | Back alignment and structure |
| >pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 | Back alignment and structure |
| >pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 | Back alignment and structure |
| >pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 | Back alignment and structure |
| >pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 | Back alignment and structure |
| >pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 | Back alignment and structure |
| >pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780 | Back alignment and structure |
| >pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780 | Back alignment and structure |
| >pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Length = 889 | Back alignment and structure |
| >pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Complexed With The Phosphinate Dipeptide Analog Length = 890 | Back alignment and structure |
| >pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin Derivative 15 Length = 891 | Back alignment and structure |
| >pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals Distinct Roles For Malaria M1- And M17-Family Aminopeptidases Length = 895 | Back alignment and structure |
| >pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex With Inhibitor Sc57461a Length = 608 | Back alignment and structure |
| >pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041 Length = 616 | Back alignment and structure |
| >pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide Length = 610 | Back alignment and structure |
| >pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With Bestatin. Length = 611 | Back alignment and structure |
| >pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase Length = 610 | Back alignment and structure |
| >pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase Length = 611 | Back alignment and structure |
| >pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant Length = 610 | Back alignment and structure |
| >pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate Length = 616 | Back alignment and structure |
| >pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A Compartmentalized, Gated Active Site Length = 891 | Back alignment and structure |
| >pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia Coli Length = 870 | Back alignment and structure |
| >pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli Aminopeptidase N Length = 891 | Back alignment and structure |
| >pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin Length = 632 | Back alignment and structure |
| >pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From Saccharomyces Cerevisiae Length = 632 | Back alignment and structure |
| >pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia Psychrerythraea Length = 605 | Back alignment and structure |
| >pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen Neisseria Meningitidis Length = 867 | Back alignment and structure |
| >pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 882 | |||
| 3se6_A | 967 | Endoplasmic reticulum aminopeptidase 2; thermolysi | 0.0 | |
| 2xdt_A | 897 | Endoplasmic reticulum aminopeptidase 1; glycoprote | 0.0 | |
| 1z5h_A | 780 | Tricorn protease interacting factor F3; zinc amino | 0.0 | |
| 2xq0_A | 632 | LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B | 0.0 | |
| 3b7s_A | 616 | Leukotriene A-4 hydrolase; transition state, analo | 0.0 | |
| 3cia_A | 605 | Cold-active aminopeptidase; psychrohilic, hydrolas | 0.0 | |
| 3ebh_A | 889 | PFA-M1, M1 family aminopeptidase; hydrolase, metal | 1e-167 | |
| 2gtq_A | 867 | Aminopeptidase N; alanine aminopeptidase, M1 famil | 1e-148 | |
| 3b34_A | 891 | Aminopeptidase N; protease, hydrolase, thermolysin | 1e-144 | |
| 3rjo_A | 419 | Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd | 1e-110 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-06 | |
| 4fgm_A | 597 | Aminopeptidase N family protein; structural genomi | 2e-06 |
| >3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 | Back alignment and structure |
|---|
Score = 1007 bits (2606), Expect = 0.0
Identities = 292/917 (31%), Positives = 464/917 (50%), Gaps = 75/917 (8%)
Query: 9 RLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTN- 67
RLP +P YD+ + P+LTS F S I+V V T+FI+L++ DL I N ++
Sbjct: 68 RLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEED 127
Query: 68 KVSSKALEPTKVELVEADEILVLEFAETLPTGM-GVLAIGFEGVLNDKMKGFYRSSYE-L 125
K + KV A E + L E L + +A+ F+ L D +GFY+S+Y L
Sbjct: 128 SRYMKPGKELKVLSYPAHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTL 187
Query: 126 NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK-VDGN 184
GE + +AVT FEP AR FPC+DEP KA F I + S +ALSNMP + ++G
Sbjct: 188 GGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIELEGG 247
Query: 185 MKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTL 244
+ ++ + MSTYLVA ++ F + TS G+KV +Y K NQ +AL ++K L
Sbjct: 248 LLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLL 307
Query: 245 ELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATV 304
+ Y++YF + Y L KLD+IAIPDFA GAMEN+GL+TYRET+LL+D + S+A++K V V
Sbjct: 308 DFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRV 367
Query: 305 VAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRL 364
+AHELAHQWFGNLVTMEWW +WLNEGFA ++ +A ++ +PE + FL+ C E +
Sbjct: 368 IAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITK 427
Query: 365 DGLAESHPIEHIGSFQVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASY 424
D L S PI +I E+FD +SY KGA ++ ML+++LG E FQ+ + Y
Sbjct: 428 DSLNSSRPIS------KPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQY 481
Query: 425 IKKYACSNAKTEDLWAALEE---------------------------GSGEPVNKLMNSW 457
+KK++ NAK +DLW++L G V ++M +W
Sbjct: 482 LKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTW 541
Query: 458 TKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQ---------WIVPITLCCGSYDVCK 508
T QKG P++ VK L L+Q +FL D + W +P+T S +V
Sbjct: 542 TLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIH 601
Query: 509 NFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIE-- 566
+L +K+D+ D+ + W+K NV+ G+Y V Y+ +L +
Sbjct: 602 RHILKSKTDTLDLP-----------EKTSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQN 650
Query: 567 MKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLIT-ISYKIGRI 625
L DR G++ D F L A + TL L + ET L ++ + +
Sbjct: 651 HTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMM 710
Query: 626 AADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLN 685
++ + LK++ + F+ ++ W S D +LR + L H +
Sbjct: 711 DRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQ 768
Query: 686 EASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTR 745
+A++ F ++ +P D+ K Y Q +G+ LL Y + S E+ +
Sbjct: 769 KAAELFSQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNK 823
Query: 746 ILSSLASCPDVNIVLEVLNFLLSSE-VRSQDAVY---GLAVSIEGRETAWKWLKDNWDHI 801
IL +L++ +L+++ + + +++Q+ +A +G++ AW ++++NW H+
Sbjct: 824 ILYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHL 883
Query: 802 SKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSR-CKPYIARTLRQSIERVQINAK 859
K + G + I IS + F+S +K++EV+ FF S + + +E + N K
Sbjct: 884 LKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQGSHLDIFQTVLETITKNIK 943
Query: 860 WVESIRNEGHLAEAVKE 876
W+E +N L +
Sbjct: 944 WLE--KNLPTLRTWLMV 958
|
| >1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 | Back alignment and structure |
|---|
| >2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632 | Back alignment and structure |
|---|
| >3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616 | Back alignment and structure |
|---|
| >3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605 | Back alignment and structure |
|---|
| >3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889 | Back alignment and structure |
|---|
| >2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867 | Back alignment and structure |
|---|
| >3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891 | Back alignment and structure |
|---|
| >3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Length = 597 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 882 | ||||
| d3b7sa3 | 252 | d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat | 4e-49 | |
| d3b7sa2 | 208 | b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-term | 2e-33 |
| >d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (435), Expect = 4e-49
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 19/258 (7%)
Query: 218 GIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENY 276
G + V+ + + + + + L++ ++ PY + D++ + P F G MEN
Sbjct: 7 GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPPSFPYGGMENP 65
Query: 277 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWV 336
L T L A + ++ V+AH+++H W GNLVT + W H WLNEG ++
Sbjct: 66 CLTFVTPTLL---------AGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYL 116
Query: 337 SYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEHIGSFQVEVNHTGEIDEIFDAI 396
LF E L L ++ H + V + D + ++
Sbjct: 117 ERHICGRLFGEKFRHFNALGGW---GELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSV 173
Query: 397 SYRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL-- 453
Y KG +++ L+ LG E F L +Y++K++ + T+D L + V+ L
Sbjct: 174 PYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQ 233
Query: 454 --MNSWTKQKGYPVISVK 469
N+W G P I
Sbjct: 234 VDWNAWLYSPGLPPIKPN 251
|
| >d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 882 | |||
| d3b7sa3 | 252 | Leukotriene A4 hydrolase catalytic domain {Human ( | 100.0 | |
| d3b7sa2 | 208 | Leukotriene A4 hydrolase N-terminal domain {Human | 100.0 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 90.44 |
| >d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=361.55 Aligned_cols=236 Identities=27% Similarity=0.456 Sum_probs=204.2
Q ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC-CCCCCCCCCCCCCEEEECCCCCCCCCCCCHH
Q ss_conf 817999970784005899999999999999998379999887651215-9999742223442121034101357887078
Q 002775 218 GIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAA 296 (882)
Q Consensus 218 g~~i~v~~~~~~~~~~~~~~~~~~~~l~~~e~~~g~~yP~~kl~~V~~-P~~~~~~me~~gli~~~e~~ll~~~~~~~~~ 296 (882)
|++|++|++|+..+.++++++.+.+++++|+++|| |||++|+|+|++ |++..|||||||++++++..+..+..
T Consensus 7 g~~vrv~~~p~~~~~~~~~l~~~~~~l~~~e~~~g-~YP~~k~d~v~~~~~~~~ggmE~~~l~~~~~~~~~~~~~----- 80 (252)
T d3b7sa3 7 GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS----- 80 (252)
T ss_dssp ETTEEEEECGGGHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHCCEEEECCCCCCCCCCCCEEEEECCHHCCCCCH-----
T ss_conf 88369997534688999999999999999999679-998332688996788655340132046310000146510-----
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHHHHHCCCCCCCCCC
Q ss_conf 799999999999999873596464543046651138999999988641840147899999999-8873101369854322
Q 002775 297 NKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEH 375 (882)
Q Consensus 297 ~~~~~~~~iaHElaHqWfG~~vt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pl~~ 375 (882)
+..+++||+|||||||+||++||+|.||+||||+|++.+++++.+|+......+..... .....|+....+|+.
T Consensus 81 ----~~~~iaHE~aHqWfG~~Vt~~~w~~~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 155 (252)
T d3b7sa3 81 ----LSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFT- 155 (252)
T ss_dssp ----TTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGG-
T ss_pred ----HHHHHHHHHHHHHHHHHCEECCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-
T ss_conf ----999999999999986122001214147642188999987640023202222233312466777876421137753-
Q ss_pred CCCCCEECCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHC-HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
Q ss_conf 4764001189--3000022551000204299999998339-999999999999984129999489999997414987899
Q 002775 376 IGSFQVEVNH--TGEIDEIFDAISYRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNK 452 (882)
Q Consensus 376 ~~~~~~~~~~--~~~~~~~f~~~~Y~Kg~~vl~mL~~~iG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~ 452 (882)
.+... ..++...|+.++|.||+++|+||+..|| ++.|+++||.|+++|+++++++.||+++++++++.+++.
T Consensus 156 -----~~~~~~~~~~~~~~f~~~~Y~Kga~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~~~~ 230 (252)
T d3b7sa3 156 -----KLVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDV 230 (252)
T ss_dssp -----SSSCCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHH
T ss_pred -----EEECCCCCCCHHHCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCH
T ss_conf -----232034443355425522530245899999998643899999999999982879999999999999985404234
Q ss_pred H----HHHHHCCCCCCEEEEE
Q ss_conf 9----9762237894169999
Q 002775 453 L----MNSWTKQKGYPVISVK 469 (882)
Q Consensus 453 ~----~~~W~~~~g~P~i~v~ 469 (882)
+ |++|++|+|||+|+|+
T Consensus 231 ~~~~~f~~W~~~~G~P~l~v~ 251 (252)
T d3b7sa3 231 LNQVDWNAWLYSPGLPPIKPN 251 (252)
T ss_dssp HTTSCHHHHHHCCSSCSSCCC
T ss_pred HHHHHHHHHHCCCCCCEEECC
T ss_conf 667599998668998725425
|
| >d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
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