Citrus Sinensis ID: 002781
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 882 | ||||||
| 224099859 | 818 | predicted protein [Populus trichocarpa] | 0.839 | 0.904 | 0.367 | 1e-94 | |
| 224111096 | 852 | predicted protein [Populus trichocarpa] | 0.831 | 0.860 | 0.369 | 2e-88 | |
| 297737130 | 1001 | unnamed protein product [Vitis vinifera] | 0.840 | 0.740 | 0.320 | 4e-66 |
| >gi|224099859|ref|XP_002311648.1| predicted protein [Populus trichocarpa] gi|222851468|gb|EEE89015.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 287/782 (36%), Positives = 412/782 (52%), Gaps = 42/782 (5%)
Query: 139 NNIVPVSEDKDYQEKEIDSFPSGVPKEAEDPHIVNQISDEREQETEVVPPAESPKFEVKT 198
N++VP E KDY EK + K + D H NQ SDE E+ E P ESPK E K
Sbjct: 41 NHVVPAGESKDYHEK-VKGLDCDDRKGSGDTHDHNQTSDE-EEHAEAHPTPESPKAETKP 98
Query: 199 NTEEGSEVCDTQPTSPSKHSEHQEIQQESNLKENQLQISDHHLEKQTSIKKEE-EGTETS 257
+ E G + P S E E ES+L+E L + + LE+QTS KKEE E S
Sbjct: 99 D-EVGGGDNEFHPASFPNELEGDEKSTESHLEETVLGANSNQLERQTSFKKEEQEIMSVS 157
Query: 258 TSETVQLSHDPDLQEFGDSKFDQPELASIHVDPPTQDSNNSLHIHEDFLGSNL--NCTSE 315
T T+ SHDP+ QE D KFDQ E H + DS NSL E+ +GSN+ + ++
Sbjct: 158 TFVTISPSHDPEPQESMDLKFDQQEFIENHSEQSINDSTNSLETSENIVGSNVVEDIITK 217
Query: 316 KNGDAIGTNISKDMNETVVSGSNLEVDIGKDDFTLKERTAEE--VSCEDRLEIDDRDETG 373
+NG + T S +++ +VSG+ L ++ D + KE ++E + E++++++ +E G
Sbjct: 218 ENGHLVETCASDNLDGILVSGTTLNMEKKIGDLSEKEMASQEDKMLSEEKVDVEVGNEVG 277
Query: 374 N-----AKGEKSVIKSDFLNGVGTKCNGEIPTKKNPISTISPKEESEVTCMDESQNPQTG 428
N E + I+SD + KC E + + + + +V + S N
Sbjct: 278 NDLSKTVVMEPTAIRSDSRSEHREKCEEEFTREMDCYGNNCSESQPQVNLIANSPNSHME 337
Query: 429 VSEPTDDCIVLAAETALAEKESEPVENKPSDCLTHSCDESVKESKIDSEKLSPSESLMIA 488
+S P D C++L ET KESE NK D+S +ES I+ E S ++S +
Sbjct: 338 LSVPEDKCMLLTEETEFTRKESETEVNKHDYSPNQLMDDSNRESDIELEHASQTDSFLGP 397
Query: 489 TEGENNQEGVEDFICCGGNKDC-TEEAKVAKNGGLVDEHSNDQNAASVEHSEDSQKEVEM 547
+ N + V+ N C EEAKV++NG +D ++ Q+ AS + ++S+ + +
Sbjct: 398 SFKNNEESSVDASHDPASNGSCQVEEAKVSENG-YIDLFNDIQSEASEDGCKESEGDTMI 456
Query: 548 VPDSGTVSTESAL---------VDCK-SEEASEEGQVFEEAEDKTKTSYGNENSKDAREN 597
VP+ G + ++ DCK EE + E Q+ EE ++KT+ + ++
Sbjct: 457 VPELGIIPEALSMSNGKGNEGETDCKLEEEKTAEKQIVEEIKEKTEAPCAIGKGAEEQQG 516
Query: 598 GEQC---TPPVEQEVSLTKAPLSLFQPQDNQQNNEMQSENIQNGNDSIPELKPEINGEFL 654
GEQ T V+ E +AP SLFQ QD QQ S + Q N ELKPE EFL
Sbjct: 517 GEQLVSKTLAVQAEAYNPQAPASLFQSQDQQQEKVTVSGDAQGSNALTLELKPESCEEFL 576
Query: 655 VTDGSPFDSK-KSMAETLTPVAESAIEKPDQDISQHTAETMMAPAEANTQVNNVSEQ--- 710
V S ++ ++ T E A+ KP ++ S + E + + E+
Sbjct: 577 VAKVSTDQAEVMNILGTSASAVELAMVKPQEEASYYFIAAREVVRETKSLAFDQCEKCDS 636
Query: 711 ------NADAQESLGRLSTESNSNNSNTQAQIQKSPSFDLDLRIEARTEESDRTPLLYHD 764
+AQES+GRLSTESN +N N Q++KSPSFDLDLRIEAR+EESD+TPLLY D
Sbjct: 637 TIFPKGGYEAQESVGRLSTESNPDNLNIHVQMRKSPSFDLDLRIEARSEESDQTPLLYQD 696
Query: 765 KTATEDFSGEQDVSLGSPIARAQ-DKLQCHAMPVEEKVVRMERNDSDKLKTPFLGFLKEE 823
K E S + DVSL SP +Q + A+PVEEKV+ +ER+DS+K +TPFLGFLKE+
Sbjct: 697 KITVESLSDQSDVSLQSPHLLSQCSQETLRALPVEEKVIALERSDSEKSRTPFLGFLKED 756
Query: 824 GEAPIIVTPQVHGNNAAAKREDKESSNLHAKEVTATS---KEKRKPRSSLFTTCMCCTTV 880
EA +VTP+ N+AAAK+ K+ N KEV + S KEK K R+SLF CMCC TV
Sbjct: 757 EEAHAVVTPKKQDNHAAAKKTTKDLWNSPTKEVASASPKGKEKHKRRTSLFGQCMCCATV 816
Query: 881 LN 882
+N
Sbjct: 817 IN 818
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224111096|ref|XP_002315746.1| predicted protein [Populus trichocarpa] gi|222864786|gb|EEF01917.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297737130|emb|CBI26331.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 882 | ||||||
| FB|FBgn0036203 | 1514 | Muc68D "Mucin 68D" [Drosophila | 0.928 | 0.540 | 0.197 | 1.1e-19 | |
| TAIR|locus:504955937 | 734 | AT2G22795 "AT2G22795" [Arabido | 0.659 | 0.792 | 0.228 | 1.2e-14 | |
| ZFIN|ZDB-GENE-091204-67 | 3919 | si:dkey-33i22.3 "si:dkey-33i22 | 0.816 | 0.183 | 0.209 | 8.1e-14 | |
| ZFIN|ZDB-GENE-081015-2 | 1413 | rpgrb "retinitis pigmentosa GT | 0.748 | 0.467 | 0.208 | 8.5e-14 | |
| TAIR|locus:2074444 | 673 | AT3G05900 "AT3G05900" [Arabido | 0.643 | 0.843 | 0.227 | 1.3e-13 | |
| TAIR|locus:2098443 | 2081 | AT3G28770 "AT3G28770" [Arabido | 0.709 | 0.300 | 0.196 | 1.6e-12 | |
| CGD|CAL0005150 | 1918 | orf19.2850 [Candida albicans ( | 0.861 | 0.396 | 0.208 | 3.7e-12 | |
| UNIPROTKB|Q5A1Z3 | 1918 | CaO19.2850 "Putative uncharact | 0.861 | 0.396 | 0.208 | 3.7e-12 | |
| UNIPROTKB|Q9NZW4 | 1301 | DSPP "Dentin sialophosphoprote | 0.868 | 0.588 | 0.159 | 2.9e-11 | |
| DICTYBASE|DDB_G0302588 | 3566 | DDB_G0302588 "RanBP2-type zinc | 0.702 | 0.173 | 0.196 | 4.5e-11 |
| FB|FBgn0036203 Muc68D "Mucin 68D" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 274 (101.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 175/885 (19%), Positives = 326/885 (36%)
Query: 19 EISTTQVQESSVKEAGQADGKEVENHNASLAEVKDHSEKENGAATNVPNGEADPHVANQT 78
E+ST ESS E+ ++ ++S E +E A + E+ P Q
Sbjct: 317 ELSTEATNESSSSES--LPNSSTQDSSSS-TETSFQTESTTDATDESSSTESQPDSTTQE 373
Query: 79 SHEREEKEIEDQPPAESPKVEVKSNATEESHESSEMQPNSVSNDSKEHEKLLGNTDGEGG 138
S E + + S V +S++TE S +S+ + +S + E +T+
Sbjct: 374 SSSSTEGPLSTE---SSTAVTDQSSSTESSQDSTTQESSSSTEGPLSTES---STEATNE 427
Query: 139 NNIVPVSEDKDYQEKEIDSFPSGVPKEAEDPHIVNQISDEREQETEVVPPAESPKFEVKT 198
++ S+D QE S G P E S E + S E
Sbjct: 428 SSSTESSQDSTTQESS--SSTEG-PLSTESSTEATNESSSTESSQDSTTQESSSSTEGPL 484
Query: 199 NTEEGSEVCDTQPTSPSKHSEHQEIQQESNLKENQL--QISDHHLEKQXXXXXXXXXXXX 256
+TE +E T +S ++ S+ Q+ S+ E L + S +
Sbjct: 485 STESSTEA--TNESSSTESSQDSTTQESSSSSEGPLSTESSTEATNESSSTESSQDSTTQ 542
Query: 257 XXXXXVQ--LSHDPDLQ--EFGDSKFDQP----ELASIHVDPPTQDSNNSLHIHEDFLGS 308
+ LS +P + E ++ Q E +S DP + +S+ S
Sbjct: 543 ESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTEATNESSSTES 602
Query: 309 NLNCTSEKNGDAIGTNISKDMNETVVSGSNLEVDIGKDDFTLKERTAEE--VSCEDRLEI 366
+ + T++++ + +S + + T S + + +D T K ++ E +S E E
Sbjct: 603 SQDSTTQESSSSTEGPLSTE-SSTEGSNESSSTESSQDSTTQKSSSSTESPLSTEPSTEA 661
Query: 367 DDRDETGNAKGEKSVIKSDFLNGV-----GTKCNGEIPTKKNPISTISPKEESEVTCMDE 421
++ T +++ + S G T+ N T+ + ST S +
Sbjct: 662 NESSSTESSQDSTTQESSSSTEGPLSTEPSTEANESSSTESSQDSTTQESSSSSEGPLST 721
Query: 422 SQNPQTGVSEPTDDCIVLAAETALAEKESEPVENKPSDCLTHSCDESVKESKIDSEKLSP 481
+ + S T+ + + + ES P+ +PS T + + S ES DS
Sbjct: 722 ESSTEANESSSTESSQDSTTQESSSSTES-PLSTEPS---TEANESSSTESSQDSTTQES 777
Query: 482 SESLMIATEGENNQEGVEDFICCGGNKDCTEEAKVAKNGGLVDEHSNDQN-AASVEHSED 540
S S E + E E T+E+ + G L E S + N ++S E S+D
Sbjct: 778 SSSTEGPLSTEPSTEANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQD 837
Query: 541 SQKEVEMVPDSGTVSTES---ALVDCKSEEASEEGQVFEEAED-----KTKTSYGNENSK 592
S + +STES A + S E+S++ E + T++S N
Sbjct: 838 STTQESSSSTEDPLSTESSTEATYESSSTESSQDSTTQESSSSTEGPLSTESSTEGSNES 897
Query: 593 DARENGEQCTPPVEQEVSLTKAPLSLFQPQDNQQNNEMQSENIQNGNDSIPELKPEINGE 652
+ E+ + T ++ S T++PLS +P + + NE S + ++ DS + E +
Sbjct: 898 SSTESSQDST--TQESSSSTESPLST-EP--STEANE--SSSTESSQDSTTQ---ESSSS 947
Query: 653 FLVTDGSPFDSKKSMAETLTPVAESAIEKPDQDISQHTAETMMAPAEANTQVNNVSEQNA 712
T+G P ++ S + ES+ + Q+ S T + E++T+ +N S
Sbjct: 948 ---TEG-PLSTESSTEANESSSTESSQDSTTQESSSSTEGPLST--ESSTEGSNESSSTE 1001
Query: 713 DAQESLGRLXXXXXXXXXXXQAQIQKSPSFDLDLRIEARTEESDRT---PLLYHDKTATE 769
+Q+S + + + + S + ++ T+ES + PL T
Sbjct: 1002 SSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEAS 1061
Query: 770 DFSGEQDVSLGSPIARAQDKLQCHAMPVEEKVVRMERNDSDKL-KTPFLGF-LKEEGEAP 827
+ S + S S + + V E + ++ L + G + +
Sbjct: 1062 NESSSTESSQDSTTQESSSSTEGPLSTESSTEVTQEPSPTESLPNSSTQGTPCTTDNPSS 1121
Query: 828 IIVTPQVHGNNAAAKREDKESSNLHAKEVTATSKEKRKPRSSLFT 872
+ +P GN+ + E+ N T+ P SS T
Sbjct: 1122 LEPSPSTPGNDDDSGNSGSENGNSSTSGSPCTTDNPSDPESSSST 1166
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| TAIR|locus:504955937 AT2G22795 "AT2G22795" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-091204-67 si:dkey-33i22.3 "si:dkey-33i22.3" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-081015-2 rpgrb "retinitis pigmentosa GTPase regulator b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| TAIR|locus:2074444 AT3G05900 "AT3G05900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098443 AT3G28770 "AT3G28770" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| CGD|CAL0005150 orf19.2850 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5A1Z3 CaO19.2850 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9NZW4 DSPP "Dentin sialophosphoprotein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0302588 DDB_G0302588 "RanBP2-type zinc finger" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 882 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 2e-09
Identities = 85/676 (12%), Positives = 186/676 (27%), Gaps = 189/676 (27%)
Query: 122 DSKEHEKLLGNTDGEGGNNIVPVSED---KDYQEKEIDSFPSGVPKEAEDPHIVNQISDE 178
D + E D I+ V ED ++ K++ P + + E HI+
Sbjct: 8 DFETGEHQYQYKD------ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 179 ----------REQETEVVPPAESPKF---EVKTNTEEGSEVCDTQPTSPSKHSEHQEIQQ 225
++ E+V KF ++ N + T+ PS + Q+
Sbjct: 62 SGTLRLFWTLLSKQEEMV-----QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 226 ESNLKENQLQISDHHLEKQTSIKKEEEGTETSTSETVQLSHDPDLQEFGDSKFDQPELAS 285
+ +NQ+ + +++ + K + +L ++ G + +A
Sbjct: 117 DRLYNDNQV-FAKYNVSRLQPYLKLRQALL-------ELRPAKNVLIDGVLGSGKTWVAL 168
Query: 286 IHVDPPTQDSNNSLHIHEDFLGSNLNCTSE----KNGDAIGTNISKDMNETVVSGSNLEV 341
I L NC S + + I + SN+++
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLK---NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225
Query: 342 DIGKDDFTLKERTAEEVSCEDRLEIDD-RDETGNAKGEKSVIKS-DFLNGVGTKCNGEIP 399
I L+ + L + + ++ + + C +
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQN--------AKAWNAFNL------SCKILLT 271
Query: 400 TK-KNPISTISPKEESEVTCMDESQNPQTGVSEPTDDCIVLAAETALAEKESEPVENKPS 458
T+ K +S + ++ S L E + + K
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSM--------------------TLTPDEVKSLLLK-- 309
Query: 459 DCLTHSCDESVKESKIDSEKLSPSESLMIATEGENNQEGVE--DFICCGGNKDCTEEAKV 516
L + +E +P ++ E+ ++G+ D
Sbjct: 310 -YLDCRPQDLPREVL----TTNP---RRLSIIAESIRDGLATWDNW-------------- 347
Query: 517 AKNGGLVDEHSN-DQNAASVEHSEDSQKEVEM---------VPDSGTVSTE--SALVDCK 564
+H N D+ +E S + + E P S + T S +
Sbjct: 348 --------KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399
Query: 565 SEEASEEGQVFEEAEDKTKTSYGNENSKDARE--NGEQC--TPPVEQEVSLTKAPLSLFQ 620
+ + V + S + K++ +E E +L ++ + +
Sbjct: 400 IKS--DVMVVVNKLHKY---SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454
Query: 621 PQDNQQNNEMQSENIQN-------------GNDSIPELKPEI--NGEFL----VTDGSPF 661
++++ + + L + + FL D + +
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514
Query: 662 DSKKSMAETLT-------------P---------------VAESAIEKPDQDISQHTAET 693
++ S+ TL P + E+ I D+ +
Sbjct: 515 NASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR---IA 571
Query: 694 MMAP-----AEANTQV 704
+MA EA+ QV
Sbjct: 572 LMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00