Citrus Sinensis ID: 002799
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 879 | ||||||
| 255552826 | 1054 | acid phosphatase, putative [Ricinus comm | 0.984 | 0.820 | 0.836 | 0.0 | |
| 224080003 | 1061 | predicted protein [Populus trichocarpa] | 0.972 | 0.805 | 0.823 | 0.0 | |
| 356568616 | 1053 | PREDICTED: inositol hexakisphosphate and | 0.985 | 0.822 | 0.826 | 0.0 | |
| 359488777 | 1051 | PREDICTED: inositol hexakisphosphate and | 0.974 | 0.815 | 0.821 | 0.0 | |
| 224140923 | 1038 | predicted protein [Populus trichocarpa] | 0.963 | 0.815 | 0.822 | 0.0 | |
| 356529953 | 1059 | PREDICTED: inositol hexakisphosphate and | 0.982 | 0.815 | 0.819 | 0.0 | |
| 357501599 | 1052 | Inositol hexakisphosphate and diphosphoi | 0.971 | 0.811 | 0.812 | 0.0 | |
| 124359918 | 1058 | Histidine acid phosphatase [Medicago tru | 0.971 | 0.807 | 0.806 | 0.0 | |
| 18417557 | 1049 | phosphoglycerate mutase-like protein [Ar | 0.980 | 0.821 | 0.790 | 0.0 | |
| 334187693 | 1059 | phosphoglycerate mutase-like protein [Ar | 0.980 | 0.813 | 0.790 | 0.0 |
| >gi|255552826|ref|XP_002517456.1| acid phosphatase, putative [Ricinus communis] gi|223543467|gb|EEF44998.1| acid phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1477 bits (3824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 739/883 (83%), Positives = 784/883 (88%), Gaps = 18/883 (2%)
Query: 7 ITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSS 66
I IGVCVMEKKV SAPMGQI+DRLQAFGEFE+IHFGDKVI EDPIE WPICDCLIAFYSS
Sbjct: 12 IKIGVCVMEKKVLSAPMGQIMDRLQAFGEFEIIHFGDKVIAEDPIESWPICDCLIAFYSS 71
Query: 67 GYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQEL 126
GYPLEKAE+YA LRKPFLVNELEPQHLLHDRRKVY++LE YGIPVPRYALVNRE PYQEL
Sbjct: 72 GYPLEKAEAYAALRKPFLVNELEPQHLLHDRRKVYQRLEMYGIPVPRYALVNREFPYQEL 131
Query: 127 DYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFH 186
DYF EEEDFVEVHGNRFWKPFVEKP+ GD+HSIMIYYPSSAGGGMKELFRKVGNRSSEFH
Sbjct: 132 DYFSEEEDFVEVHGNRFWKPFVEKPIDGDNHSIMIYYPSSAGGGMKELFRKVGNRSSEFH 191
Query: 187 PDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRY 246
P+VRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRY
Sbjct: 192 PEVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRY 251
Query: 247 PVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVL 306
PVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVL
Sbjct: 252 PVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVL 311
Query: 307 RKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSG-LGTFGQSEELRCVIAVMRH 365
RKMFL+AKAPHLSS IPP LPWK+NEPVQP+EGLTRQGSG +GTFGQSEELRCVI VMRH
Sbjct: 312 RKMFLDAKAPHLSSTIPPTLPWKINEPVQPSEGLTRQGSGIIGTFGQSEELRCVITVMRH 371
Query: 366 GDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLDATRILVPRSRPGR 425
GDRTPKQKVKLKVTEEKLLNLMLKYNGGRPR+ETKLKSA+QLQDLLDATRILVPR RPGR
Sbjct: 372 GDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRSETKLKSAIQLQDLLDATRILVPRIRPGR 431
Query: 426 ESDSEAEDFEHSKKRIICVAILHLGGQFEKFFNVQDV--LLSIQCHLLLANLVSGQFIDF 483
ESDSEAED EH++K A+L GG F + + L ++ + ++
Sbjct: 432 ESDSEAEDIEHAEKLRQVKAVLEEGGHFSGIYRKVQLKPLKWVKIPKSTGEAEEERPVEA 491
Query: 484 LIEQFYQDNGV---------NEIAYWWGSH---SEGTGLLRLHSTYRHDLKIYSSDEGRV 531
L+ Y GV E+ ++ ++ EGTGLLRLHSTYRHDLKIYSSDEGRV
Sbjct: 492 LMVLKY--GGVLTHAGRKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHDLKIYSSDEGRV 549
Query: 532 QMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKM 591
QMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNAS EMEEAKARLNEII S +K
Sbjct: 550 QMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASSEMEEAKARLNEIITSSTKA 609
Query: 592 IHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQVRQLAKDEDEDLAETNPYDVI 651
+SN S + PWM DG GLPPNASELLP+LVKLTKKVTEQVR LAKDEDE+L ET+ Y+VI
Sbjct: 610 ANSNESPEFPWMTDGAGLPPNASELLPELVKLTKKVTEQVRLLAKDEDEELTETSSYNVI 669
Query: 652 PPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDV 711
PPYDQAKALGK NIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERK+RFDITQIPDV
Sbjct: 670 PPYDQAKALGKINIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKDRFDITQIPDV 729
Query: 712 YDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKL 771
YDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGK+
Sbjct: 730 YDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKI 789
Query: 772 LIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYPPKLFIKADDTRRSSTTSDISMD 831
LIDLRNTREEAISVAELKS+QDQ S STK EKED DY KLFIK +DTRR+S TS+IS D
Sbjct: 790 LIDLRNTREEAISVAELKSNQDQHSTSTKNEKEDADYQSKLFIKNEDTRRTS-TSEISTD 848
Query: 832 QDDDDDKETQYRLDPKYANVKTPERHVRTRLYFTSVCIIYIAV 874
DDDDDKET+YRLDPKYANVKTPERHVRTRLYFTS I+ V
Sbjct: 849 HDDDDDKETKYRLDPKYANVKTPERHVRTRLYFTSESHIHSLV 891
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224080003|ref|XP_002305988.1| predicted protein [Populus trichocarpa] gi|222848952|gb|EEE86499.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356568616|ref|XP_003552506.1| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359488777|ref|XP_002282227.2| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224140923|ref|XP_002323826.1| predicted protein [Populus trichocarpa] gi|222866828|gb|EEF03959.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356529953|ref|XP_003533550.1| PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357501599|ref|XP_003621088.1| Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Medicago truncatula] gi|355496103|gb|AES77306.1| Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|124359918|gb|ABN07938.1| Histidine acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|18417557|ref|NP_568308.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|25054864|gb|AAN71921.1| unknown protein [Arabidopsis thaliana] gi|332004729|gb|AED92112.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|334187693|ref|NP_001190313.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] gi|332004730|gb|AED92113.1| phosphoglycerate mutase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 879 | ||||||
| TAIR|locus:2102057 | 1056 | AT3G01310 [Arabidopsis thalian | 0.972 | 0.809 | 0.750 | 0.0 | |
| UNIPROTKB|E1BXR8 | 1179 | PPIP5K1 "Uncharacterized prote | 0.468 | 0.349 | 0.527 | 6.2e-169 | |
| UNIPROTKB|A7Z050 | 1477 | PPIP5K1 "Inositol hexakisphosp | 0.475 | 0.283 | 0.522 | 8.9e-168 | |
| MGI|MGI:2443281 | 1436 | Ppip5k1 "diphosphoinositol pen | 0.488 | 0.298 | 0.516 | 1.1e-167 | |
| UNIPROTKB|J9NS35 | 1528 | PPIP5K1 "Uncharacterized prote | 0.475 | 0.273 | 0.522 | 1.1e-167 | |
| UNIPROTKB|J9P7K0 | 1406 | PPIP5K1 "Uncharacterized prote | 0.475 | 0.297 | 0.522 | 1.1e-167 | |
| RGD|1311552 | 1434 | Ppip5k1 "diphosphoinositol pen | 0.475 | 0.291 | 0.522 | 1.8e-167 | |
| UNIPROTKB|D4A214 | 1413 | Hisppd2a "Protein Hisppd2a" [R | 0.475 | 0.295 | 0.522 | 1.8e-167 | |
| UNIPROTKB|P0C644 | 1434 | Ppip5k1 "Inositol hexakisphosp | 0.475 | 0.291 | 0.522 | 1.8e-167 | |
| UNIPROTKB|B7WPL9 | 1429 | PPIP5K1 "Inositol hexakisphosp | 0.475 | 0.292 | 0.520 | 1.8e-167 |
| TAIR|locus:2102057 AT3G01310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3333 (1178.3 bits), Expect = 0., P = 0.
Identities = 666/887 (75%), Positives = 730/887 (82%)
Query: 3 VHKKITIGVCVMEKKV------FSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPI 56
V +KI IGVCVMEKKV FSAPMG+ILDRLQ+FGEFE++HFGDKVILEDPIE WPI
Sbjct: 10 VGEKIKIGVCVMEKKVKCGSEVFSAPMGEILDRLQSFGEFEILHFGDKVILEDPIESWPI 69
Query: 57 CDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYAL 116
CDCLIAF+SSGYPLEKA++YA LRKPFLVNEL+PQ+LLHDRRKVYE LE YGIPVPRYA
Sbjct: 70 CDCLIAFHSSGYPLEKAQAYAALRKPFLVNELDPQYLLHDRRKVYEHLEMYGIPVPRYAC 129
Query: 117 VNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFR 176
VNR+VP Q+L YF+EEEDFVEVHG RFWKPFVEKPV+GDDHSIMIYYPSSAGGGMKELFR
Sbjct: 130 VNRKVPNQDLHYFVEEEDFVEVHGERFWKPFVEKPVNGDDHSIMIYYPSSAGGGMKELFR 189
Query: 177 KVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVM 236
K+GNRSSEFHPDVRRVRREGSYIYEEFM TGGTDVKVYTVGPEYAHAEARKSPVVDGVVM
Sbjct: 190 KIGNRSSEFHPDVRRVRREGSYIYEEFMATGGTDVKVYTVGPEYAHAEARKSPVVDGVVM 249
Query: 237 RNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSY 296
RN DGKEVRYPVLLTP EKQMAREVCIAFRQAVCGFDLLR EG SYVCDVNGWSFVKNSY
Sbjct: 250 RNTDGKEVRYPVLLTPAEKQMAREVCIAFRQAVCGFDLLRSEGCSYVCDVNGWSFVKNSY 309
Query: 297 KYYDDAACVLRKMFLEAKAPHLSSAIPPILPWKVNEPVQPTEGLTRQGSGL-GTFGQSEE 355
KYYDDAACVLRKM L+AKAPHLSS +PP LPWKVNEPVQ EGLTRQGSG+ GTFGQSEE
Sbjct: 310 KYYDDAACVLRKMCLDAKAPHLSSTLPPTLPWKVNEPVQSNEGLTRQGSGIIGTFGQSEE 369
Query: 356 LRCVIAVMRHGDRTPKQXXXXXXXXXXXXXXMLKYNGGRPRAETKLKSAVQLQDLLDATR 415
LRCVIAV+RHGDRTPKQ MLKYNGG+PRAETKLKSAVQLQDLLDATR
Sbjct: 370 LRCVIAVVRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGKPRAETKLKSAVQLQDLLDATR 429
Query: 416 ILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFFN-VQDVLLSIQCHLLLAN 474
+LVPR+RPGRESDS+AED EH++K A+L GG F + VQ L ++ + +
Sbjct: 430 MLVPRTRPGRESDSDAEDLEHAEKLRQVKAVLEEGGHFSGIYRKVQ--LKPLKWVKIPKS 487
Query: 475 LVSGQF---IDFLIEQFYQD-------NGVNEIAYWWGSH---SEGTGLLRLHSTYRHDL 521
G+ ++ L+ Y E+ ++ ++ EGTGLLRLHSTYRHDL
Sbjct: 488 DGDGEEERPVEALMVLKYGGVLTHAGRKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHDL 547
Query: 522 KIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARL 581
KIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEME AKARL
Sbjct: 548 KIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEAAKARL 607
Query: 582 NEIIKSGSKMIHSN--GSSDCPWMADGVGLPPNASEXXXXXXXXXXXXXEQVRQLAKDED 639
NEI+ SG+KMI + S D PWM DG GLPPNA E EQVR LA DED
Sbjct: 608 NEIVTSGTKMIDDDQVSSEDFPWMTDGAGLPPNAHELLRELVKLTKNVTEQVRLLAMDED 667
Query: 640 EDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNER 699
E+L E PYD+IPPYDQAKALGKTNID DRIA+GLPCGSEGFLLM+ARW KL RDLYNER
Sbjct: 668 ENLTE--PYDIIPPYDQAKALGKTNIDSDRIASGLPCGSEGFLLMFARWIKLARDLYNER 725
Query: 700 KERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKI 759
K+RFDITQIPDVYDSCKYDLLHN+HL+L+GLDELFKVAQLLADGVIPNEYGINP+QKLKI
Sbjct: 726 KDRFDITQIPDVYDSCKYDLLHNSHLDLKGLDELFKVAQLLADGVIPNEYGINPQQKLKI 785
Query: 760 GSKIARRLLGKLLIDLRNTREEAISVAELKSSQDQVSKSTKTEKEDKDYPPKLFIKAXXX 819
GSKIARRL+GK+LIDLRNTREEA+SVAELK SQ+QV + +++ED++ PKLFI +
Sbjct: 786 GSKIARRLMGKILIDLRNTREEALSVAELKESQEQVLSLSASQREDRNSQPKLFINSDEL 845
Query: 820 XXXXXXXXXXXXXXXXXXKETQYRLDPKYANVKTPERHVRTRLYFTS 866
KET+YRLDPKYANVKTPERHVRTRLYFTS
Sbjct: 846 RRPGTGDKDEDDD-----KETKYRLDPKYANVKTPERHVRTRLYFTS 887
|
|
| UNIPROTKB|E1BXR8 PPIP5K1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A7Z050 PPIP5K1 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2443281 Ppip5k1 "diphosphoinositol pentakisphosphate kinase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9NS35 PPIP5K1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9P7K0 PPIP5K1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| RGD|1311552 Ppip5k1 "diphosphoinositol pentakisphosphate kinase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|D4A214 Hisppd2a "Protein Hisppd2a" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P0C644 Ppip5k1 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B7WPL9 PPIP5K1 "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 879 | |||
| pfam00328 | 327 | pfam00328, His_Phos_2, Histidine phosphatase super | 1e-16 | |
| cd07061 | 242 | cd07061, HP_HAP_like, Histidine phosphatase domain | 1e-08 | |
| COG0189 | 318 | COG0189, RimK, Glutathione synthase/Ribosomal prot | 9e-07 | |
| pfam08443 | 190 | pfam08443, RimK, RimK-like ATP-grasp domain | 2e-05 | |
| TIGR00768 | 277 | TIGR00768, rimK_fam, alpha-L-glutamate ligases, Ri | 4e-05 | |
| pfam00328 | 327 | pfam00328, His_Phos_2, Histidine phosphatase super | 9e-05 | |
| cd07040 | 153 | cd07040, HP, Histidine phosphatase domain found in | 0.002 |
| >gnl|CDD|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2) | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 1e-16
Identities = 55/272 (20%), Positives = 88/272 (32%), Gaps = 78/272 (28%)
Query: 509 GLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLD 568
GLL ++ I SSD R SA AF GL EG D+ +LD
Sbjct: 73 GLLPDGYPP-SEVYIRSSDSNRTLASAQAFLAGLFPPEG----------DIDNDLLDWQP 121
Query: 569 NASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVT 628
+ + E K L ++ G CP + + K+V
Sbjct: 122 IPVVTLPEVKKALANLLLL--------GYDSCPAFDE---------------SLVEKRVD 158
Query: 629 EQVRQLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARW 688
++ +L E +A+ G+TN+ W
Sbjct: 159 PELAKLLAVYLEPIAKRL---------SQLLPGETNLT-----------------GLDVW 192
Query: 689 RKLERDLYNERKERFDITQIPDVYDSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNE 748
L+ L+ D + PD++ YD LH +L+ L+E + ++
Sbjct: 193 ALLDLCLFE--TNASDNSPFPDLFTG--YDALHLEYLSD--LEEYYGLS----------- 235
Query: 749 YGINPKQKLKIGSKIARRLLGKLLIDLRNTRE 780
GI P+ IG + LL +L L +
Sbjct: 236 -GIGPELAKLIGGPLLNELLKRLTNALVPDQT 266
|
The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Length = 327 |
| >gnl|CDD|132717 cd07061, HP_HAP_like, Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >gnl|CDD|223267 COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|117020 pfam08443, RimK, RimK-like ATP-grasp domain | Back alignment and domain information |
|---|
| >gnl|CDD|233121 TIGR00768, rimK_fam, alpha-L-glutamate ligases, RimK family | Back alignment and domain information |
|---|
| >gnl|CDD|215860 pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2) | Back alignment and domain information |
|---|
| >gnl|CDD|132716 cd07040, HP, Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 879 | |||
| KOG1057 | 1018 | consensus Arp2/3 complex-interacting protein VIP1/ | 100.0 | |
| COG0189 | 318 | RimK Glutathione synthase/Ribosomal protein S6 mod | 99.97 | |
| PF08443 | 190 | RimK: RimK-like ATP-grasp domain; InterPro: IPR013 | 99.95 | |
| PRK10446 | 300 | ribosomal protein S6 modification protein; Provisi | 99.93 | |
| PLN02941 | 328 | inositol-tetrakisphosphate 1-kinase | 99.93 | |
| TIGR00768 | 277 | rimK_fam alpha-L-glutamate ligases, RimK family. T | 99.9 | |
| TIGR02144 | 280 | LysX_arch Lysine biosynthesis enzyme LysX. The fam | 99.9 | |
| PRK05246 | 316 | glutathione synthetase; Provisional | 99.89 | |
| TIGR01380 | 312 | glut_syn glutathione synthetase, prokaryotic. This | 99.88 | |
| PRK12458 | 338 | glutathione synthetase; Provisional | 99.86 | |
| TIGR02291 | 317 | rimK_rel_E_lig alpha-L-glutamate ligase-related pr | 99.76 | |
| TIGR03103 | 547 | trio_acet_GNAT GNAT-family acetyltransferase TIGR0 | 99.75 | |
| PRK01372 | 304 | ddl D-alanine--D-alanine ligase; Reviewed | 99.74 | |
| PRK14016 | 727 | cyanophycin synthetase; Provisional | 99.7 | |
| PF00328 | 347 | His_Phos_2: Histidine phosphatase superfamily (bra | 99.7 | |
| TIGR02068 | 864 | cya_phycin_syn cyanophycin synthetase. Cyanophycin | 99.68 | |
| PRK02471 | 752 | bifunctional glutamate--cysteine ligase/glutathion | 99.65 | |
| PRK14571 | 299 | D-alanyl-alanine synthetase A; Provisional | 99.57 | |
| TIGR01205 | 315 | D_ala_D_alaTIGR D-alanine--D-alanine ligase. but a | 99.55 | |
| TIGR01435 | 737 | glu_cys_lig_rel glutamate--cysteine ligase/gamma-g | 99.54 | |
| PRK14569 | 296 | D-alanyl-alanine synthetase A; Provisional | 99.49 | |
| PF02955 | 173 | GSH-S_ATP: Prokaryotic glutathione synthetase, ATP | 99.48 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 99.38 | |
| PRK12767 | 326 | carbamoyl phosphate synthase-like protein; Provisi | 99.37 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 99.35 | |
| PRK01966 | 333 | ddl D-alanyl-alanine synthetase A; Reviewed | 99.35 | |
| PRK14572 | 347 | D-alanyl-alanine synthetase A; Provisional | 99.34 | |
| PRK14568 | 343 | vanB D-alanine--D-lactate ligase; Provisional | 99.33 | |
| PRK14570 | 364 | D-alanyl-alanine synthetase A; Provisional | 99.3 | |
| PRK13790 | 379 | phosphoribosylamine--glycine ligase; Provisional | 99.23 | |
| PF13535 | 184 | ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A | 99.16 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 99.16 | |
| PF05770 | 307 | Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6- | 99.15 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 99.14 | |
| PRK00885 | 420 | phosphoribosylamine--glycine ligase; Provisional | 99.09 | |
| PRK07206 | 416 | hypothetical protein; Provisional | 99.08 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 99.02 | |
| PRK05294 | 1066 | carB carbamoyl phosphate synthase large subunit; R | 99.01 | |
| PRK05586 | 447 | biotin carboxylase; Validated | 99.0 | |
| PRK08463 | 478 | acetyl-CoA carboxylase subunit A; Validated | 98.99 | |
| PRK02186 | 887 | argininosuccinate lyase; Provisional | 98.98 | |
| PRK07178 | 472 | pyruvate carboxylase subunit A; Validated | 98.98 | |
| PRK08462 | 445 | biotin carboxylase; Validated | 98.97 | |
| PF02655 | 161 | ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 | 98.96 | |
| TIGR01369 | 1050 | CPSaseII_lrg carbamoyl-phosphate synthase, large s | 98.94 | |
| PRK08654 | 499 | pyruvate carboxylase subunit A; Validated | 98.94 | |
| PRK08591 | 451 | acetyl-CoA carboxylase biotin carboxylase subunit; | 98.91 | |
| PRK06111 | 450 | acetyl-CoA carboxylase biotin carboxylase subunit; | 98.91 | |
| TIGR00877 | 423 | purD phosphoribosylamine--glycine ligase. This enz | 98.88 | |
| PF14397 | 285 | ATPgrasp_ST: Sugar-transfer associated ATP-grasp | 98.87 | |
| cd07061 | 242 | HP_HAP_like Histidine phosphatase domain found in | 98.86 | |
| TIGR00514 | 449 | accC acetyl-CoA carboxylase, biotin carboxylase su | 98.86 | |
| PRK06395 | 435 | phosphoribosylamine--glycine ligase; Provisional | 98.83 | |
| TIGR01235 | 1143 | pyruv_carbox pyruvate carboxylase. This enzyme pla | 98.81 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 98.76 | |
| PRK14573 | 809 | bifunctional D-alanyl-alanine synthetase A/UDP-N-a | 98.76 | |
| PF15632 | 329 | ATPgrasp_Ter: ATP-grasp in the biosynthetic pathwa | 98.76 | |
| PRK12815 | 1068 | carB carbamoyl phosphate synthase large subunit; R | 98.75 | |
| PF07478 | 203 | Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; In | 98.74 | |
| PRK12833 | 467 | acetyl-CoA carboxylase biotin carboxylase subunit; | 98.72 | |
| PLN02257 | 434 | phosphoribosylamine--glycine ligase | 98.71 | |
| PRK12999 | 1146 | pyruvate carboxylase; Reviewed | 98.67 | |
| PRK06524 | 493 | biotin carboxylase-like protein; Validated | 98.65 | |
| PF02750 | 203 | Synapsin_C: Synapsin, ATP binding domain; InterPro | 98.64 | |
| PRK05294 | 1066 | carB carbamoyl phosphate synthase large subunit; R | 98.6 | |
| COG1821 | 307 | Predicted ATP-utilizing enzyme (ATP-grasp superfam | 98.59 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 98.59 | |
| COG1181 | 317 | DdlA D-alanine-D-alanine ligase and related ATP-gr | 98.58 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 98.56 | |
| TIGR01369 | 1050 | CPSaseII_lrg carbamoyl-phosphate synthase, large s | 98.45 | |
| PRK13789 | 426 | phosphoribosylamine--glycine ligase; Provisional | 98.42 | |
| TIGR02712 | 1201 | urea_carbox urea carboxylase. Members of this fami | 98.37 | |
| PRK12815 | 1068 | carB carbamoyl phosphate synthase large subunit; R | 98.32 | |
| PF14398 | 262 | ATPgrasp_YheCD: YheC/D like ATP-grasp | 98.28 | |
| PRK05784 | 486 | phosphoribosylamine--glycine ligase; Provisional | 98.25 | |
| KOG1057 | 1018 | consensus Arp2/3 complex-interacting protein VIP1/ | 98.14 | |
| COG0439 | 449 | AccC Biotin carboxylase [Lipid metabolism] | 97.83 | |
| PRK13278 | 358 | purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D | 97.77 | |
| COG2232 | 389 | Predicted ATP-dependent carboligase related to bio | 97.52 | |
| PF02786 | 211 | CPSase_L_D2: Carbamoyl-phosphate synthase L chain, | 97.5 | |
| PRK13277 | 366 | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribo | 97.48 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 97.33 | |
| PF02222 | 172 | ATP-grasp: ATP-grasp domain; InterPro: IPR003135 T | 96.97 | |
| KOG3895 | 488 | consensus Synaptic vesicle protein Synapsin [Signa | 96.72 | |
| COG0458 | 400 | CarB Carbamoylphosphate synthase large subunit (sp | 96.66 | |
| ), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF01071">PF01071 | 194 | GARS_A: Phosphoribosylglycinamide synthetase, ATP- | 96.22 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 95.75 | |
| PF14305 | 239 | ATPgrasp_TupA: TupA-like ATPgrasp | 95.06 | |
| COG3919 | 415 | Predicted ATP-grasp enzyme [General function predi | 94.52 | |
| KOG3672 | 487 | consensus Histidine acid phosphatase [General func | 91.52 | |
| COG0151 | 428 | PurD Phosphoribosylamine-glycine ligase [Nucleotid | 91.14 | |
| cd07040 | 153 | HP Histidine phosphatase domain found in a functio | 89.44 | |
| COG1038 | 1149 | PycA Pyruvate carboxylase [Energy production and c | 88.99 | |
| KOG3720 | 411 | consensus Lysosomal & prostatic acid phosphatases | 87.66 | |
| PF14243 | 130 | DUF4343: Domain of unknown function (DUF4343) | 85.37 | |
| KOG0238 | 670 | consensus 3-Methylcrotonyl-CoA carboxylase, biotin | 84.72 |
| >KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-271 Score=2247.12 Aligned_cols=822 Identities=54% Similarity=0.829 Sum_probs=746.0
Q ss_pred CCeeEEEEeecCcccCChhHHHHHHHHhccCCeEEEEeCCcccccCCCccCCCcceeeccccCCCcHHHHHHHHHhcCCc
Q 002799 4 HKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPF 83 (879)
Q Consensus 4 ~~~~~iGVCaM~~Ka~SkPm~~IL~rL~~~~~f~~iiF~d~~IL~e~ve~wP~~D~lIsf~s~GfpL~kai~y~~lr~p~ 83 (879)
.++|+||||||++|++||||++||+||..+++|++|||+|+|||+|||||||.|||||||||+||||+||++|+++|+||
T Consensus 38 ~r~i~vGICaM~kK~~SKPm~~il~rli~f~~~~~vvf~e~viL~EpVENWP~CdcLIsFhSsGFPLdKAiaY~kLRnPF 117 (1018)
T KOG1057|consen 38 ERQIVVGICAMAKKSKSKPMKEILERLILFKYITVVVFEEEVILREPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPF 117 (1018)
T ss_pred ccceEEEEeechhhhccChHHHHHHHHHhcceeEEEEeccceeeccccccCcccceEEEeccCCCChHHHHHHHHhcCCe
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCchhhhHhhhHHHHHHHHHhCCCCCCCEEEEeccCCCccccccccccceeeecCeeccCcEEEeeccccCcceeEEe
Q 002799 84 LVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYY 163 (879)
Q Consensus 84 ~iNdl~~q~il~DR~~~~qiL~~~gIP~P~t~~~~r~~p~~~~~~~~e~~d~i~v~g~~~~kPfVeKpv~GedHni~IYy 163 (879)
+||||.||+++||||.||+||++.|||+|++.+++|++|++.++++++++|+++|||++|.||||||||+||||||||||
T Consensus 118 viNdL~mQyll~DRR~Vy~iLe~~gI~~PRya~~nr~~pn~~~~~lie~eD~vEVnGevf~KPFVEKPVs~EDHNIYIYY 197 (1018)
T KOG1057|consen 118 VINDLDMQYLLQDRREVYSILEAEGIPLPRYAILNRDPPNPKLCNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNIYIYY 197 (1018)
T ss_pred eeccccHHHHHHHHHHHHHHHHHcCCCCceeEeecCCCCChHHhhhhcCCCeEEEcceeccCCcccCCCCcccccEEEEe
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhhcCCCcccccccccccccCcceEEeeccCCCCceeEEEEECCceeEEEeeeCCCCCCeeeecCCCCc
Q 002799 164 PSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKE 243 (879)
Q Consensus 164 p~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFI~t~G~DIKVytVG~~~vhAe~RKSP~~DG~vrrN~~gke 243 (879)
|+|+|||++||||||||+||+|+|++ .+|+.|||||||||+|+|||||||||||+|+|||+|||||+||+|+||+||||
T Consensus 198 PsSaGGGsqrLFRKIgnRSS~y~P~~-~vRkeGSyIYEeFMptdgtDVKvYTVGp~YaHAEaRKSPvvDGkV~Rns~GKE 276 (1018)
T KOG1057|consen 198 PSSAGGGSQRLFRKIGNRSSEYHPDS-SVRKEGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPVVDGKVERNSDGKE 276 (1018)
T ss_pred cCCCCccHHHHHHHhcccccccCCcc-ccccccceehhhhcCCCCccceEEeeCcchhhhhhccCccccceeeecCCCce
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeCCHHHHHHHHHHHHHhCCceeEEEEEeeCCCcEEEecCCccccccchhhHHHHHHHHHHHHHHhhCCCCCCCCC
Q 002799 244 VRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAIP 323 (879)
Q Consensus 244 ~r~pv~Lt~eEk~iA~ka~~afgq~VcGfDLLRs~g~syV~DVNGwSFVK~n~kYYddcA~iL~~~~l~~~~~~~~~~~~ 323 (879)
+||||.||++||.||+|||.||+|+||||||||++|+|||||||||||||||+|||||||+||++|++.+.+++..+.+|
T Consensus 277 vRYpv~Ls~~EK~iA~KVciAF~Q~VCGFDLLRa~G~SYVcDVNGfSFVKns~kYYDd~AkIL~~~~~~ak~~~~~~~iP 356 (1018)
T KOG1057|consen 277 VRYPVILNSSEKQIARKVCIAFKQTVCGFDLLRANGKSYVCDVNGFSFVKNSNKYYDDCAKILGKMNLSARALAPASQIP 356 (1018)
T ss_pred eeceeecChhhHHHHhHHHhhccccccchHHhhcCCceEEEeccceeeeecchhhhHHHHHHHhhhhhhhhccCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888889
Q ss_pred CCCCCCCCCCCCCCCCcccCCCCCCCCCCccceEEEEEEEEcCCCCcccceeEEechHHHHHHHHhhcCCCCccceeecc
Q 002799 324 PILPWKVNEPVQPTEGLTRQGSGLGTFGQSEELRCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKS 403 (879)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eLr~vvaViRHgDRTPKQK~K~~~~~~~f~~l~~~~~~~~~~~e~kLk~ 403 (879)
+++||..+++ .++..+ +++++++|||||||||||||||||||||++|++++||+||++|+|++ ++|+|||+
T Consensus 357 ~~~p~~~~~~---~~~~v~-----~~~g~~~elrcviaViRHgDRTPKQK~K~~vt~~~f~~L~ek~~G~~-~~e~klk~ 427 (1018)
T KOG1057|consen 357 WSLPGIRNEK---VEPWVP-----TSSGGMMELRCVIAVIRHGDRTPKQKMKLSVTSPKFLGLFEKYDGYK-KEETKLKS 427 (1018)
T ss_pred CCCcccccCC---CCCcee-----cCCCccceeeeeEEEEecCCCCccceeeEEeccHHHHHHHHhhCCcc-ccceeeCC
Confidence 8888877654 233444 35679999999999999999999999999999999999999999876 77999999
Q ss_pred hHhHHHHHHHHHhhccccCCCCCCCCchhhhhhhhhHHHHHHHHhcCCCCCCcce-eecchhhhhhhcccccccCCCcce
Q 002799 404 AVQLQDLLDATRILVPRSRPGRESDSEAEDFEHSKKRIICVAILHLGGQFEKFFN-VQDVLLSIQCHLLLANLVSGQFID 482 (879)
Q Consensus 404 ~~qLq~~ld~~~~~l~~~~~~~~~~~~~e~~e~~~kl~ql~~vLe~~~~fsGinr-vQlKp~~~~~~~~~~~~~~~~~~~ 482 (879)
|.|||+|||++|.++++.+ ++++++.|...||+||++||||||||||||| |||||++| +..++++++.++..+
T Consensus 428 ~~QLq~vLd~ar~ll~e~~-----~~~~~die~~~KleQlk~vLE~~ghFsGinrKVQlk~l~~-~~~k~se~e~~r~~~ 501 (1018)
T KOG1057|consen 428 ANQLQEVLDAARLLLEEKE-----DKDAEDIEEAKKLEQLKNVLEMYGHFSGINRKVQLKPLKW-VYVKKSEGELEREPQ 501 (1018)
T ss_pred HHHHHHHHHHHHhhhcccc-----cCcccchhhHHHHHHHHHHHHhhCCCCCccceeeeeeccc-cCCCCCccccccCcc
Confidence 9999999999999998754 2234445668899999999999999999999 99999999 555666666667788
Q ss_pred eEEEEecc----cch---HHHHHHHhc--CC-CCCCchhhhcccccccceEeecCCchHHHHHHHHHHhhhcccCCCCcc
Q 002799 483 FLIEQFYQ----DNG---VNEIAYWWG--SH-SEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPI 552 (879)
Q Consensus 483 ~lLIlKWG----hag---Ae~LG~~fR--Yp-~~~~gLLrLhst~rhDlKIysSdEgRVq~TAaaFakglL~legeLtPI 552 (879)
++||+||| ||| ||||||+|| || |+|+|||||||||||||||||||||||||||||||||||+|||+||||
T Consensus 502 llliLKwGGelT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgLL~lEgelTpi 581 (1018)
T KOG1057|consen 502 LLLILKWGGELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPI 581 (1018)
T ss_pred eeEEeeeCCEecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHHHhhccCCcHH
Confidence 99999999 999 999999999 55 779999999999999999999999999999999999999999999999
Q ss_pred ceeeEecCCCcccCCccchHHHHHHHHHHHHHHhcCCCccCCCCCCCCcCccccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002799 553 LVSLVSKDSSMLDGLDNASIEMEEAKARLNEIIKSGSKMIHSNGSSDCPWMADGVGLPPNASELLPKLVKLTKKVTEQVR 632 (879)
Q Consensus 553 lv~lV~kd~~lLD~~~~a~~~m~~vK~~L~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~l~~~~~~~~~ 632 (879)
|||||+||+.|||++++|+++|++||++||+|||.|.++ +++|+|+.. + |+|++++.+++++|+.++..++
T Consensus 582 LvqmVkkdn~LLD~~~~as~~m~~vK~~L~~ilq~~~~~-----~~e~~~~~~---~-P~~~~~l~~~ve~vk~~~k~~~ 652 (1018)
T KOG1057|consen 582 LVQMVKKDNTLLDDDNAASSYMDKVKARLHEILQAGREF-----TPEFDWPEL---M-PNPSEVLTQVVELVKNPVKVCD 652 (1018)
T ss_pred HHHHHHhcchhhcCcchhHHHHHHHHHHHHHHHhcCCcC-----CCccchhhc---C-CcHhHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999866 467899975 3 5999999999999999998887
Q ss_pred HHhhhhccccccCCCCCCCCChhhhhhcCCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHhccccCcccCCCCCcch
Q 002799 633 QLAKDEDEDLAETNPYDVIPPYDQAKALGKTNIDVDRIAAGLPCGSEGFLLMYARWRKLERDLYNERKERFDITQIPDVY 712 (879)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~c~gE~~~L~~~RW~KL~~dF~~~k~~~fD~SKIpdiY 712 (879)
+.+.. ..++ ..++++.+|.+|+||+|+|+||++||+|||+|||+. +++||||||||||
T Consensus 653 e~~~~-------------~~~~--------~~i~v~~~~~r~~~~sE~~~Lm~~RW~Kl~rdf~~k-~~r~DiSKIpdiY 710 (1018)
T KOG1057|consen 653 ENFAL-------------IEPL--------DHIDVERIQPRWPCHSETPDLMRERWEKLERDFYNK-RERFDISKIPDIY 710 (1018)
T ss_pred Hhhhc-------------cccc--------cceeeecccCCCCcCCCCHHHHHHHHHHHHHHHhhh-ccccCccccchHH
Confidence 65422 1122 247899999999999999999999999999999975 5999999999999
Q ss_pred hhhhhhhhcccccccccHHHHHHHHHHhcceecccccCCCchhhhhhHHHHHHHHHHHHHHHHHHhHHhhhhhhhhcccc
Q 002799 713 DSCKYDLLHNAHLNLEGLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKIARRLLGKLLIDLRNTREEAISVAELKSSQ 792 (879)
Q Consensus 713 D~iKYD~lHN~~l~l~~l~eLY~~ak~LaD~V~PqEYGI~~~EKl~IG~~~~~pLL~KI~~DL~~~~~e~~~~~~~~~~~ 792 (879)
||||||+|||++|.++++.|||.+||.|||+|+||||||+++|||+||..+|.|||+||+.||+++++ +..+...++.
T Consensus 711 D~~KYD~~HN~~l~~~~~~ely~~ak~lad~vip~eYgi~~~~kl~I~~~~~~~ll~Ki~~dL~~~~e--~~~~et~~~~ 788 (1018)
T KOG1057|consen 711 DTIKYDLLHNRQLLLNGFDELYKYAKLLADIVIPQEYGINPQEKLKIGQGICTPLLGKILSDLVRTLE--LESAETKNRL 788 (1018)
T ss_pred hhhhHHhhcchhhhhccccHHHHHHHhhcccccccccCCCHHHhhhhhhhhcchhhhhhhHhhhcchh--hcchhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999887 5666777776
Q ss_pred cccccccccc-ccCCCCCCccccccccccCCCCcCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeeeeechhHHH
Q 002799 793 DQVSKSTKTE-KEDKDYPPKLFIKADDTRRSSTTSDISMDQDDDDDKETQYRLDPKYANVKTPERHVRTRLYFTSVCIIY 871 (879)
Q Consensus 793 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~rL~p~ya~v~SP~RhVRTRLYFTSESHiH 871 (879)
++.+- ++.+ .-...|....+--++...+.-..++. ...+++.+|.+||++.+....++.||++||||||+|||||
T Consensus 789 ~p~~~-sp~~~~r~~lY~~sk~~v~sl~~~ryG~~~~---~~ln~~~~t~~~L~~~~~~d~~~e~~~~~rlyFtreshi~ 864 (1018)
T KOG1057|consen 789 NPVYL-SPRRHVRTRLYFTSKSHVHSLLLRRYGISDV---EKLNDGLLTSIRLYEQILNDPTSERHFHTRLYFTRESHIY 864 (1018)
T ss_pred Ccccc-ChhHHHHHHHhhhhHhhhhhhhhhhcCCchh---hhhcccchhceeechhhccCCcccccceeEEEeccchhhh
Confidence 66531 1111 11123333332222222222223222 2334567899999999999999999999999999999999
Q ss_pred HHHhhcc
Q 002799 872 IAVINTQ 878 (879)
Q Consensus 872 SLln~~~ 878 (879)
+|+|+++
T Consensus 865 ~l~nv~~ 871 (1018)
T KOG1057|consen 865 TLMNVIR 871 (1018)
T ss_pred hhhhHhh
Confidence 9999974
|
|
| >COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF08443 RimK: RimK-like ATP-grasp domain; InterPro: IPR013651 This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK [] | Back alignment and domain information |
|---|
| >PRK10446 ribosomal protein S6 modification protein; Provisional | Back alignment and domain information |
|---|
| >PLN02941 inositol-tetrakisphosphate 1-kinase | Back alignment and domain information |
|---|
| >TIGR00768 rimK_fam alpha-L-glutamate ligases, RimK family | Back alignment and domain information |
|---|
| >TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX | Back alignment and domain information |
|---|
| >PRK05246 glutathione synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR01380 glut_syn glutathione synthetase, prokaryotic | Back alignment and domain information |
|---|
| >PRK12458 glutathione synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase-related protein | Back alignment and domain information |
|---|
| >TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 | Back alignment and domain information |
|---|
| >PRK01372 ddl D-alanine--D-alanine ligase; Reviewed | Back alignment and domain information |
|---|
| >PRK14016 cyanophycin synthetase; Provisional | Back alignment and domain information |
|---|
| >PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle | Back alignment and domain information |
|---|
| >TIGR02068 cya_phycin_syn cyanophycin synthetase | Back alignment and domain information |
|---|
| >PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK14571 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
| >TIGR01205 D_ala_D_alaTIGR D-alanine--D-alanine ligase | Back alignment and domain information |
|---|
| >TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type | Back alignment and domain information |
|---|
| >PRK14569 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
| >PF02955 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP-grasp domain; InterPro: IPR004218 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK12767 carbamoyl phosphate synthase-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
| >PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed | Back alignment and domain information |
|---|
| >PRK14572 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
| >PRK14568 vanB D-alanine--D-lactate ligase; Provisional | Back alignment and domain information |
|---|
| >PRK14570 D-alanyl-alanine synthetase A; Provisional | Back alignment and domain information |
|---|
| >PRK13790 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A | Back alignment and domain information |
|---|
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
| >PF05770 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6-kinase; InterPro: IPR008656 This entry represents inositol-tetrakisphosphate 1-kinase which is also called inositol 1,3,4-trisphosphate 5/6-kinase | Back alignment and domain information |
|---|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
| >PRK00885 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK07206 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK05586 biotin carboxylase; Validated | Back alignment and domain information |
|---|
| >PRK08463 acetyl-CoA carboxylase subunit A; Validated | Back alignment and domain information |
|---|
| >PRK02186 argininosuccinate lyase; Provisional | Back alignment and domain information |
|---|
| >PRK07178 pyruvate carboxylase subunit A; Validated | Back alignment and domain information |
|---|
| >PRK08462 biotin carboxylase; Validated | Back alignment and domain information |
|---|
| >PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule [] | Back alignment and domain information |
|---|
| >TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit | Back alignment and domain information |
|---|
| >PRK08654 pyruvate carboxylase subunit A; Validated | Back alignment and domain information |
|---|
| >PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
| >PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
| >TIGR00877 purD phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
| >PF14397 ATPgrasp_ST: Sugar-transfer associated ATP-grasp | Back alignment and domain information |
|---|
| >cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit | Back alignment and domain information |
|---|
| >PRK06395 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >TIGR01235 pyruv_carbox pyruvate carboxylase | Back alignment and domain information |
|---|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
| >PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
| >PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon | Back alignment and domain information |
|---|
| >PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
| >PF07478 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; InterPro: IPR011095 This entry represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme 6 | Back alignment and domain information |
|---|
| >PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional | Back alignment and domain information |
|---|
| >PLN02257 phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
| >PRK12999 pyruvate carboxylase; Reviewed | Back alignment and domain information |
|---|
| >PRK06524 biotin carboxylase-like protein; Validated | Back alignment and domain information |
|---|
| >PF02750 Synapsin_C: Synapsin, ATP binding domain; InterPro: IPR020898 The synapsins are a family of neuron-specific phosphoproteins that coat synaptic vesicles and are involved in the binding between these vesicles and the cytoskeleton (including actin filaments) | Back alignment and domain information |
|---|
| >PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
| >COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
| >COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
| >TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit | Back alignment and domain information |
|---|
| >PRK13789 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >TIGR02712 urea_carbox urea carboxylase | Back alignment and domain information |
|---|
| >PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
| >PF14398 ATPgrasp_YheCD: YheC/D like ATP-grasp | Back alignment and domain information |
|---|
| >PRK05784 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG0439 AccC Biotin carboxylase [Lipid metabolism] | Back alignment and domain information |
|---|
| >PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only] | Back alignment and domain information |
|---|
| >PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) | Back alignment and domain information |
|---|
| >PRK13277 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein; Provisional | Back alignment and domain information |
|---|
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis | Back alignment and domain information |
|---|
| >KOG3895 consensus Synaptic vesicle protein Synapsin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6 | Back alignment and domain information |
|---|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF14305 ATPgrasp_TupA: TupA-like ATPgrasp | Back alignment and domain information |
|---|
| >COG3919 Predicted ATP-grasp enzyme [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3672 consensus Histidine acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
| >COG0151 PurD Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >COG1038 PycA Pyruvate carboxylase [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF14243 DUF4343: Domain of unknown function (DUF4343) | Back alignment and domain information |
|---|
| >KOG0238 consensus 3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 879 | ||||
| 3t7a_A | 330 | Crystal Structure Of The Catalytic Domain Of Human | 1e-107 | ||
| 3t54_A | 334 | Crystal Structure Of The Catalytic Domain Of Human | 1e-107 |
| >pdb|3T7A|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Diphosphoinositol Pentakisphosphate Kinase 2 (Ppip5k2) In Complex With Adp At Ph 5.2 Length = 330 | Back alignment and structure |
|
| >pdb|3T54|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Diphosphoinositol Pentakisphosphate Kinase 2 (Ppip5k2) In Complex With Atp And Cadmium Length = 334 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 879 | |||
| 3t7a_A | 330 | Inositol pyrophosphate kinase; ATP-grAsp fold, tra | 1e-178 | |
| 1z2n_X | 324 | Inositol 1,3,4-trisphosphate 5/6-kinase; inositol | 1e-29 | |
| 2q7d_A | 346 | Inositol-tetrakisphosphate 1-kinase; inositol kina | 2e-23 | |
| 1uc8_A | 280 | LYSX, lysine biosynthesis enzyme; alpha-aminoadipa | 1e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 |
| >3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 3t54_A* 3t99_A* Length = 330 | Back alignment and structure |
|---|
Score = 516 bits (1329), Expect = e-178
Identities = 185/328 (56%), Positives = 243/328 (74%), Gaps = 3/328 (0%)
Query: 5 KKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFY 64
++I +G+C M KK S PM +IL+R+ F V+ F ++VIL +P+E WP+CDCLI+F+
Sbjct: 6 RQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFH 65
Query: 65 SSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQ 124
S G+PL+KA +YA LR PF++N+L Q+L+ DRR+VY L+ GI +PRYA++NR+
Sbjct: 66 SKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNP 125
Query: 125 ELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSE 184
+ IE ED VEV+G F KPFVEKPV +DH++ IYYP+SAGGG + LFRK+G+RSS
Sbjct: 126 KECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSV 185
Query: 185 FHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEV 244
+ P+ VR+ GSYIYEEFMPT GTDVKVYTVGP+YAHAEARKSP +DG V R+ +GKEV
Sbjct: 186 YSPES-NVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEV 244
Query: 245 RYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAAC 304
RYPV+L EK +A +VC+AF+Q VCGFDLLR G+SYVCDVNG+SFVKNS KYYDD A
Sbjct: 245 RYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAK 304
Query: 305 VLRKMFLEAKAPHLSSAIPPILPWKVNE 332
+L + + AP IP +P + +
Sbjct: 305 ILGNIVMRELAPQFH--IPWSIPLEAED 330
|
| >1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* Length = 324 | Back alignment and structure |
|---|
| >2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X Length = 346 | Back alignment and structure |
|---|
| >1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Length = 280 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 879 | ||||
| d1i7na2 | 206 | d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus nor | 3e-07 | |
| d1uc8a2 | 192 | d.142.1.7 (A:89-280) Lysine biosynthesis enzyme Ly | 6e-06 |
| >d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Synapsin C-terminal domain domain: Synapsin II species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.1 bits (118), Expect = 3e-07
Identities = 32/231 (13%), Positives = 63/231 (27%), Gaps = 37/231 (16%)
Query: 86 NELEPQHLLHDRRKVYEQLEKY--GIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRF 143
N LE + D+ V+ Q+ + ++ L+ + +
Sbjct: 1 NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHREMLTL-----------P 49
Query: 144 WKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEF 203
P V K H +G G ++ +F V +Y E
Sbjct: 50 TFPVVVKIGHA-----------HSGMGKVKVENHY-----DFQDIASVVALTQTYATAEP 93
Query: 204 MPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCI 263
D++V +G Y G N + + + + +
Sbjct: 94 FIDAKYDIRVQKIGNNYKAYMRTSIS---GNWKTNTGSAMLEQIAMSDRYKLWVDACSEM 150
Query: 264 AFRQAVCGFDLLRCE-GRSYVCDVNGWSFVKNSYKYYDD----AACVLRKM 309
+C + + G+ Y+ +V S +D V+ KM
Sbjct: 151 FGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITDLVISKM 201
|
| >d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} Length = 192 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 879 | |||
| d1i7na2 | 206 | Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116 | 99.78 | |
| d1uc8a2 | 192 | Lysine biosynthesis enzyme LysX ATP-binding domain | 99.78 | |
| d1gsaa2 | 192 | Prokaryotic glutathione synthetase, C-domain {Esch | 99.72 | |
| d1e4ea2 | 211 | D-alanine:D-lactate ligase VanA, C-domain {Enteroc | 99.25 | |
| d1ehia2 | 228 | D-alanine:D-lactate ligase VanA, C-domain {Leucono | 99.25 | |
| d1iowa2 | 210 | D-ala-D-ala ligase, C-domain {Escherichia coli, ge | 99.16 | |
| d1nd6a_ | 342 | Prostatic acid phosphatase {Human (Homo sapiens) [ | 99.05 | |
| d1vkza3 | 220 | Glycinamide ribonucleotide synthetase (GAR-syn), d | 98.8 | |
| d3etja3 | 198 | N5-carboxyaminoimidazole ribonucleotide synthetase | 98.66 | |
| d1a9xa5 | 275 | Carbamoyl phosphate synthetase (CPS), large subuni | 98.65 | |
| d2r85a2 | 235 | 5-formaminoimidazole-4-carboxamide ribonucleotide | 98.64 | |
| d1a9xa6 | 259 | Carbamoyl phosphate synthetase (CPS), large subuni | 98.52 | |
| d1ulza3 | 214 | Biotin carboxylase (BC), domain 2 {Aquifex aeolicu | 98.46 | |
| d2r7ka2 | 238 | 5-formaminoimidazole-4-carboxamide ribonucleotide | 98.45 | |
| d1gsoa3 | 224 | Glycinamide ribonucleotide synthetase (GAR-syn), d | 98.38 | |
| d1kjqa3 | 206 | Glycinamide ribonucleotide transformylase PurT, do | 98.36 | |
| d1nt4a_ | 391 | Glucose-1-phosphatase {Escherichia coli [TaxId: 56 | 98.15 | |
| d2j9ga3 | 216 | Biotin carboxylase (BC), domain 2 {Escherichia col | 98.12 | |
| d1dkla_ | 409 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 98.11 | |
| d1qwoa_ | 435 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 98.05 | |
| d1w96a3 | 267 | Acetyl-CoA carboxylase, BC-M subdomain {Baker's ye | 98.04 | |
| d1ihpa_ | 438 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 97.93 | |
| d1qfxa_ | 447 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 97.84 | |
| d1uc8a1 | 88 | Lysine biosynthesis enzyme LysX, N-terminal domain | 93.27 | |
| d2io8a3 | 297 | Glutathionylspermidine synthase, synthetase domain | 88.45 |
| >d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Synapsin C-terminal domain domain: Synapsin II species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.78 E-value=5.8e-19 Score=145.23 Aligned_cols=193 Identities=16% Similarity=0.166 Sum_probs=130.9
Q ss_pred CCCHHHHHHHHHHHHHHHH--HH-----CCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCC
Q ss_conf 8901466763399999999--96-----8999997899824678755543345545045517040575899504326762
Q 002799 86 NELEPQHLLHDRRKVYEQL--EK-----YGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHS 158 (879)
Q Consensus 86 Ndl~~q~~l~DR~~~~qiL--~~-----~gIp~P~t~~~~r~~p~~~~~~~~e~~d~I~v~g~~~~kPfVeKpv~GedHn 158 (879)
|+++++..+.||..||..| .. .++|++.+..... ..+... .+++|+|+||..|.
T Consensus 1 Ns~~si~~~~dK~~v~~~l~~~~~~l~~~~~p~~~~~~~~~------------~~~~~~----~~~~PvVvKP~~g~--- 61 (206)
T d1i7na2 1 NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPN------------HREMLT----LPTFPVVVKIGHAH--- 61 (206)
T ss_dssp SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESS------------GGGGSS----CCCSSEEEEESSCS---
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCC------------HHHHHH----HCCCCEEEECCCCC---
T ss_conf 98799988659688999999984406898665110035400------------667765----14895699667778---
Q ss_pred EEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCCEEEEC
Q ss_conf 16870257887288997330787654455522234685169953158898103899987832588861079999902316
Q 002799 159 IMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRN 238 (879)
Q Consensus 159 i~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyEEFi~t~G~DIKVytVG~~~vhAe~RKSP~~DG~vrrN 238 (879)
.|.|+. + +.+..+.-+........+..+++||||+. +.|+||.++|++++++..|.. .+.|+.|
T Consensus 62 --------~g~Gv~-~---v~~~~~l~~~~~~~~~~~~~~~vqe~I~~-~~dirv~vig~~~~~~~~~~~---~~~~~~n 125 (206)
T d1i7na2 62 --------SGMGKV-K---VENHYDFQDIASVVALTQTYATAEPFIDA-KYDIRVQKIGNNYKAYMRTSI---SGNWKTN 125 (206)
T ss_dssp --------TTTTEE-E---ECSHHHHHHHHHHHHHHTCCEEEEECCCE-EEEEEEEEETTEEEEEEEESS---CTTTSCS
T ss_pred --------CCCCEE-E---EEECCHHHHHHHHHHHCCCEEEEEEEECC-CCEEEEEEEECCEEEEEEECC---CCCCCCC
T ss_conf --------897737-8---73031145678887631673899986413-104789999366258885113---4421125
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHHC-CCEEEEEEEEE-CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 8999400136289989999999999927-90638979865-89927992179522235313199999999999997408
Q 002799 239 PDGKEVRYPVLLTPNEKQMAREVCIAFR-QAVCGFDLLRC-EGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKA 315 (879)
Q Consensus 239 ~~gke~r~pv~Lt~eEk~iA~kv~~afg-q~VcGfDLLRs-~g~syVcDVNG~SFvK~n~kYYddcA~iL~~~~l~~~~ 315 (879)
.+.++...+. ..+++++++.+++.+++ ..+||||++.+ +|++||+|||+-++..-....+.| .+++.+++++.+.
T Consensus 126 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gvD~~~~~dG~~yvlEvN~~~~~~~~~~~~~~-~~~i~d~v~~~~~ 202 (206)
T d1i7na2 126 TGSAMLEQIA-MSDRYKLWVDACSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVED-RQLITDLVISKMN 202 (206)
T ss_dssp CCCSSEEEEC-CCHHHHHHHHHHTTGGGCCSEEEEEEEEETTSCEEEEEEECTTCCCCSSCHHHH-HHHHHHHHHHHHH
T ss_pred CCCCCCCCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHH-HHHHHHHHHHHHH
T ss_conf 4567665666-876999999877544056660268999868997999997598834332157788-8789999999999
|
| >d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
| >d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} | Back information, alignment and structure |
|---|
| >d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
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| >d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1qwoa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
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| >d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1ihpa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus ficuum [TaxId: 5058]} | Back information, alignment and structure |
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| >d1qfxa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
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| >d1uc8a1 c.30.1.6 (A:1-88) Lysine biosynthesis enzyme LysX, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d2io8a3 d.142.1.8 (A:201-378,A:497-615) Glutathionylspermidine synthase, synthetase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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