Citrus Sinensis ID: 002832
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 875 | 2.2.26 [Sep-21-2011] | |||||||
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.988 | 0.903 | 0.899 | 0.0 | |
| P22180 | 956 | Plasma membrane ATPase 1 | N/A | no | 0.989 | 0.905 | 0.901 | 0.0 | |
| Q08436 | 956 | Plasma membrane ATPase 3 | N/A | no | 0.989 | 0.905 | 0.903 | 0.0 | |
| Q9LV11 | 956 | ATPase 11, plasma membran | yes | no | 0.989 | 0.905 | 0.893 | 0.0 | |
| Q9SU58 | 960 | ATPase 4, plasma membrane | no | no | 0.989 | 0.902 | 0.894 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.977 | 0.899 | 0.819 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.981 | 0.902 | 0.809 | 0.0 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.979 | 0.903 | 0.807 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.976 | 0.898 | 0.808 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.974 | 0.899 | 0.801 | 0.0 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1582 bits (4096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/865 (89%), Positives = 829/865 (95%)
Query: 2 DSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESK 61
+ K E ++AVLKEAVDLEN+P+EEVFE LRC KEGL+ AA+ERL IFGYNKLEEK++SK
Sbjct: 3 EEKPEVLDAVLKEAVDLENIPIEEVFENLRCTKEGLTATAAQERLAIFGYNKLEEKKDSK 62
Query: 62 ILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNA 121
+LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENNA
Sbjct: 63 LLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNA 122
Query: 122 GNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKID 181
GNAAAALMA LAPK+KVLRDG+W EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKID
Sbjct: 123 GNAAAALMARLAPKAKVLRDGRWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKID 182
Query: 182 QSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQ 241
QSALTGESLPVTKGPGD VYSGSTCKQGEIEA+VIATGVHTFFGKAAHLVDSTNQ GHFQ
Sbjct: 183 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQ 242
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
KVLTAIGNFCICSIAVGMI+EIIVMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 243 KVLTAIGNFCICSIAVGMIIEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTM 302
Query: 302 AIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADA 361
AIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+FAKGVDAD
Sbjct: 303 AIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADM 362
Query: 362 VVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGK 421
VVLMAARASR ENQDAIDAAIVGMLADPKEARA I+E+HFLPFNPTDKRTALTY+D EGK
Sbjct: 363 VVLMAARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGK 422
Query: 422 MHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPW 481
MHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSL VAYQEVP+GRKES+GGPW
Sbjct: 423 MHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESAGGPW 482
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 541
QFIGL+PLFDPPRHDSAETIRRALNLGVNVKM+TGDQLAI KETGRRLGMGTNMYPSSAL
Sbjct: 483 QFIGLLPLFDPPRHDSAETIRRALNLGVNVKMVTGDQLAIGKETGRRLGMGTNMYPSSAL 542
Query: 542 LGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
LGQ KDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK
Sbjct: 543 LGQTKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 602
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
KADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 KADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
Query: 662 LGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILG 721
LGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTG++LG
Sbjct: 663 LGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLG 722
Query: 722 GYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTR 781
GYLAMMTVIFFWAAY+T+FFP FGVS+L + DD++KLASAIYLQVS ISQALIFVTR
Sbjct: 723 GYLAMMTVIFFWAAYKTNFFPHVFGVSTLEKTATDDFRKLASAIYLQVSIISQALIFVTR 782
Query: 782 ARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIP 841
+RSWSFV+RPG LLV+AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+W+YNL+FYIP
Sbjct: 783 SRSWSFVERPGFLLVIAFVIAQLVATLIAVYANWSFAAIEGIGWGWAGVIWIYNLVFYIP 842
Query: 842 LDFIKFFIRYALSGKAWDLVIEQRV 866
LD IKFFIRYALSG+AWDLV E+R+
Sbjct: 843 LDIIKFFIRYALSGRAWDLVFERRI 867
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1580 bits (4092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/866 (90%), Positives = 827/866 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC +EGL+ AA+ERL+IFGYNKLEEK+ES
Sbjct: 1 MAEKPEVLDAVLKETVDLENIPIEEVFENLRCTREGLTATAAQERLSIFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW EEDA++LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWDEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIE+FAKG+DAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKALIEVFAKGIDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR+ENQDAID AIVGMLADPKEARA I+E+HFLPFNPTDKRTALTY+D EG
Sbjct: 361 TVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKS+IERRVH +IDKFAERGLRSL VAYQEVP+GRKES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHTVIDKFAERGLRSLGVAYQEVPEGRKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFI L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIALLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+T+FFPR FGVS+L + DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYKTNFFPRIFGVSTLEKTATDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV AF VAQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN++ YI
Sbjct: 781 RSRSWSFVERPGLLLVFAFFVAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVTYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLD IKF IRYALSGKAWDLV+EQR+
Sbjct: 841 PLDLIKFLIRYALSGKAWDLVLEQRI 866
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1579 bits (4089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 782/866 (90%), Positives = 828/866 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC KEGL+ AA+ERL+IFGYNKLEEK+ES
Sbjct: 1 MGEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLTATAAQERLSIFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K KFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFSKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIE+FA+GVDAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKYLIEVFARGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR ENQDAIDAAIVGMLADPKEARA I+E+HFLPFNPTDKRTALTY+D EG
Sbjct: 361 TVVLMAARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQIL+L NKS+IERRVHA+IDKFAERGLRSLAVAYQEVP+GRKES+GGP
Sbjct: 421 KMHRVSKGAPEQILHLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFI L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIALLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+T+FFPR FGVS+L + DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYKTNFFPRVFGVSTLEKTATDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSF++RPGLLLV+AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN++FYI
Sbjct: 781 RSRSWSFMERPGLLLVVAFFIAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLD F IRYALSGKAWDLVIEQR+
Sbjct: 841 PLDLXXFLIRYALSGKAWDLVIEQRI 866
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1575 bits (4079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 774/866 (89%), Positives = 833/866 (96%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKE VDLENVP+EEVFE+LRC++EGL+TEAA+ERL +FG+NKLEEK+ES
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W E+DAAILVPGDIIS+KLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQS+LTGESLPVTKGPGD VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN GHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAA+ASR+ENQDAIDAAIVGMLADPKEARA ++EVHFLPFNPTDKRTALTYIDS+G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL N++EIERRVHA+IDKFAERGLRSLAVAYQEVP+G KES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFWAAY+TDFFPRTFGVS+L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 721 GSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWS+V+RPG+LLV+AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN++FYI
Sbjct: 781 RSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLD IKF IRYALSG+AWDLVIEQRV
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVIEQRV 866
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1575 bits (4078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/866 (89%), Positives = 832/866 (96%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
++ E +EAVLKEAVDLENVP+EEVFE LRC+KEGL+T+AA+ERL +FG+NKLEEK+ES
Sbjct: 5 VEDNREVLEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKES 64
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 65 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 124
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W E+DAAILVPGDIIS+KLGDI+PADARLLEGDPLKI
Sbjct: 125 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 184
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTK GD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 185 DQSALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHF 244
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGM++EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 245 QQVLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 304
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 305 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDAD 364
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR+ENQDAIDAAIVGMLADPK+ARA IQEVHFLPFNPTDKRTALTYID+EG
Sbjct: 365 TVVLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEG 424
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
HRVSKGAPEQILNL NKSEIERRVHA+IDKFAERGLRSLAVAYQ+VP+GRK+S+GGP
Sbjct: 425 NTHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGP 484
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGV+VKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 485 WQFVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSA 544
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 545 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 604
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 605 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 664
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 665 VLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 724
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFW +Y+TDFFPRTFGV++L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 725 GSYMAMMTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVT 784
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPG+ L++AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN+IFYI
Sbjct: 785 RSRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYI 844
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLDFIKFFIRYALSG+AWDLVIEQRV
Sbjct: 845 PLDFIKFFIRYALSGRAWDLVIEQRV 870
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1436 bits (3717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/859 (81%), Positives = 785/859 (91%), Gaps = 4/859 (0%)
Query: 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLG 67
+E + EAVDLEN+P+EEVFE L+C +EGLS+E R+ +FG NKLEEK+ESKILKFLG
Sbjct: 4 LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANGGGKPPDW+DFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA+LAPK+KVLRDG+W E++AAILVPGDIIS+KLGDI+PADARLLEGDPLKIDQSALTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 183
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQ VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIAVG+++EIIVM+PIQHR YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
LS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+E+F KGVD D V+L+AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAA 363
Query: 368 RASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSK 427
RASR ENQDAIDAA+VGMLADPKEARA I+EVHFLPFNP DKRTALTYID++G HR SK
Sbjct: 364 RASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASK 423
Query: 428 GAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487
GAPEQIL L K +++R+VHA+IDK+AERGLRSLAVA QEVP+ KES+GGPWQF+GL+
Sbjct: 424 GAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD 547
PLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQNKD
Sbjct: 484 PLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 543
Query: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ ALPVDELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
AVADATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGF+L+
Sbjct: 604 AVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLI 663
Query: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727
ALIWK+DF PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIF TG++LG YLA+M
Sbjct: 664 ALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLALM 723
Query: 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSF 787
TVIFFWA ++TDFF FGV S+ + ++ SA+YLQVS +SQALIFVTR+RSWSF
Sbjct: 724 TVIFFWAMHKTDFFTDKFGVRSIRNSE----HEMMSALYLQVSIVSQALIFVTRSRSWSF 779
Query: 788 VDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKF 847
++RPGLLLV AF +AQL+AT +AVYANW FA I+G+GWGWAGV+WLY+++FY PLD KF
Sbjct: 780 IERPGLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKF 839
Query: 848 FIRYALSGKAWDLVIEQRV 866
FIR+ LSG+AWD ++E ++
Sbjct: 840 FIRFVLSGRAWDNLLENKI 858
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1420 bits (3676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/863 (80%), Positives = 781/863 (90%), Gaps = 4/863 (0%)
Query: 3 SKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKI 62
+KA ++E + E VDLE +P+EEVFE L+C +EGLS + RL IFG NKLEEK ESKI
Sbjct: 2 AKAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKI 61
Query: 63 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAG 122
LKFLGFMWNPLSWVMEAAA+MAIALANG GKPPDWQDF+GI+ LL+INSTISFIEENNAG
Sbjct: 62 LKFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAG 121
Query: 123 NAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182
NAAAALMA LAPK+KVLRDG+W E++AAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ
Sbjct: 122 NAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 181
Query: 183 SALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQK 242
SALTGESLPVTK PGD V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN GHFQK
Sbjct: 182 SALTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQK 241
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIA+GM+VEIIVMYPIQHRKYR GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 242 VLTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 301
Query: 303 IGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAV 362
IGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD+NL+E+FAKGVD + V
Sbjct: 302 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYV 361
Query: 363 VLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKM 422
+L+AARASRVENQDAIDA +VGMLADPKEARA I+EVHFLPFNP DKRTALTYID+
Sbjct: 362 LLLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNW 421
Query: 423 HRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQ 482
HR SKGAPEQIL+L K ++ R+VH+++DK+AERGLRSLAVA + VP+ KES GG W+
Sbjct: 422 HRASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWE 481
Query: 483 FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL 542
F+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS++LL
Sbjct: 482 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLL 541
Query: 543 GQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ+KD +I +LP++ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKK
Sbjct: 542 GQDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKK 601
Query: 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662
ADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 602 ADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVF 661
Query: 663 GFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGG 722
GFM +ALIWK+DF FMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGV+LGG
Sbjct: 662 GFMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGG 721
Query: 723 YLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRA 782
Y A+MTV+FFWA + TDFF FGV SL D +++ SA+YLQVS ISQALIFVTR+
Sbjct: 722 YQALMTVVFFWAMHDTDFFSDKFGVKSLRNSD----EEMMSALYLQVSIISQALIFVTRS 777
Query: 783 RSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPL 842
RSWSF++RPG+LLV+AF +AQL+ATLIAVYANW+FA ++G GWGWAGV+WLY++IFY+PL
Sbjct: 778 RSWSFLERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPL 837
Query: 843 DFIKFFIRYALSGKAWDLVIEQR 865
D +KF IRY LSGKAW+ +++ +
Sbjct: 838 DIMKFAIRYILSGKAWNNLLDNK 860
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1413 bits (3657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/861 (80%), Positives = 779/861 (90%), Gaps = 4/861 (0%)
Query: 5 AETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILK 64
A +E ++ E VDLE +P+EEVF+ L+C++EGLS E RL IFG NKLEEK+ESK+LK
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 65 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNA 124
FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIV LL+INSTISF+EENNAGNA
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 125 AAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSA 184
AAALMA LAPK+KVLRDGKW E++A+ILVPGDI+S+KLGDIIPADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 185 LTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVL 244
LTGESLP TKGPG+ V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 245 TAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304
TAIGNFCICSIAVG+ +EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 305 SHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVL 364
SH+LS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE++ KGV+ D V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 365 MAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHR 424
AARASRVENQDAIDAA+VGMLADPKEARA I+E+HFLPFNP DKRTALT+IDS G HR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 425 VSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFI 484
VSKGAPEQIL+L ++++ +RVH+ IDK+AERGLRSLAV+ Q VP+ KESSG PW+F+
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ 544
G++PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIAKETGRRLGMG+NMYPSS+LLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 545 NKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604
+KDE++ +PV++LIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKKAD
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 605 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 664
IGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 665 MLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYL 724
ML+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TGV+LGGY+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 725 AMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARS 784
A+MTV+FFWAAY+TDFFPRTF V L + ++ SA+YLQVS +SQALIFVTR+RS
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSE----HEMMSALYLQVSIVSQALIFVTRSRS 777
Query: 785 WSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDF 844
WSF +RPG L++AF VAQLIAT IAVY NW FA I+G+GWGWAGV+WLY+++FY PLD
Sbjct: 778 WSFTERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDI 837
Query: 845 IKFFIRYALSGKAWDLVIEQR 865
+KF IRY L+G AW +I+ R
Sbjct: 838 MKFAIRYILAGTAWKNIIDNR 858
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1412 bits (3655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/858 (80%), Positives = 781/858 (91%), Gaps = 4/858 (0%)
Query: 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLG 67
+E + EAVDLEN+P+EEVFE L+C ++GL+++ +R+ IFG NKLEEK+ESK+LKFLG
Sbjct: 4 LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANGGGKPPDWQDFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA+LAPK+KVLRDG+W E++A+ILVPGDI+S+KLGDI+PADARLLEGDPLKIDQS LTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTG 183
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQ+VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCI SIAVG+++EIIVM+PIQ RKYR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
LS QGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKLSVDKNL+E+FAKGVD + V+L+AA
Sbjct: 304 LSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAA 363
Query: 368 RASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSK 427
RASRVENQDAIDA +VGMLADPKEARA I+EVHFLPFNPTDKRTALTYID+EG HR SK
Sbjct: 364 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASK 423
Query: 428 GAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487
GAPEQI+ L K +++R+VH++I+K+AERGLRSLAVA QEVP+ K+S GGPWQFIGL+
Sbjct: 424 GAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD 547
PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ+KD
Sbjct: 484 PLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKD 543
Query: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ +LPVDELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 GSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
AV DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGFML+
Sbjct: 604 AVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFMLI 663
Query: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727
ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIF TGV+LG YLA++
Sbjct: 664 ALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALV 723
Query: 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSF 787
TV+FFW ++TDFF FGV S+ + K SA+YLQVS +SQALIFVTR+RSWSF
Sbjct: 724 TVVFFWLIHKTDFFTNKFGVESIRNTEF----KEMSALYLQVSIVSQALIFVTRSRSWSF 779
Query: 788 VDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKF 847
V+RPG LLV AF +AQL+ATLIAVYANW FA I+G+GWGWAGV+WL++++FY PLD KF
Sbjct: 780 VERPGFLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLDIFKF 839
Query: 848 FIRYALSGKAWDLVIEQR 865
FIR+ LSG+AWD +++ +
Sbjct: 840 FIRFVLSGRAWDNLLQNK 857
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1412 bits (3654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/857 (80%), Positives = 769/857 (89%), Gaps = 4/857 (0%)
Query: 9 EAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGF 68
+ + KE VDLE +P+EEVFE L+C+KEGLS++ +RL IFG NKLEEK E+K LKFLGF
Sbjct: 8 DEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGF 67
Query: 69 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAAL 128
MWNPLSWVME+AAIMAI LANGGGK PDWQDF+GI+ LL+INSTISFIEENNAGNAAAAL
Sbjct: 68 MWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAAL 127
Query: 129 MASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGE 188
MA+LAPK+KVLRDGKW E++A+ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248
SLP TK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLT+IG
Sbjct: 188 SLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EI++MYPIQHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAAR 368
S QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+LIE+F K +D+D+VVLMAAR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAAR 367
Query: 369 ASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKG 428
ASR+ENQDAIDA+IVGML DPKEARA I EVHFLPFNP DKRTA+TYID G HR SKG
Sbjct: 368 ASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKG 427
Query: 429 APEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMP 488
APEQI+ L + E +R+ H +ID FAERGLRSL VA Q VP+ KES G PW+F+GL+P
Sbjct: 428 APEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE 548
LFDPPRHDSAETIRRAL LGVNVKMITGDQLAI ETGRRLGMGTNMYPS++LLG +KDE
Sbjct: 488 LFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDE 547
Query: 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
S+V +P+DELIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 548 SLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 607
Query: 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668
VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 608 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 667
Query: 669 LIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMT 728
LIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGV+LG Y+A+ T
Sbjct: 668 LIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMALTT 727
Query: 729 VIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFV 788
V+FFW A+ TDFF +TFGV S+ + ++L +A+YLQVS ISQALIFVTR+RSWSFV
Sbjct: 728 VLFFWLAHDTDFFSKTFGVRSIQGNE----EELMAALYLQVSIISQALIFVTRSRSWSFV 783
Query: 789 DRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848
+RPG LL++AF +AQL+ATLIAVYANW FA I G GWGWAG +W+Y++I YIPLD +KF
Sbjct: 784 ERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFI 843
Query: 849 IRYALSGKAWDLVIEQR 865
IRYAL+GKAWD +I Q+
Sbjct: 844 IRYALTGKAWDNMINQK 860
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 875 | ||||||
| 356572262 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.989 | 0.905 | 0.918 | 0.0 | |
| 449461911 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.989 | 0.905 | 0.921 | 0.0 | |
| 225456641 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.989 | 0.905 | 0.914 | 0.0 | |
| 297793855 | 956 | AHA11-ATPASE 11 [Arabidopsis lyrata subs | 0.989 | 0.905 | 0.891 | 0.0 | |
| 350535937 | 956 | plasma membrane H+-ATPase [Solanum lycop | 0.989 | 0.905 | 0.905 | 0.0 | |
| 170206 | 956 | H+-translocating ATPase [Nicotiana plumb | 0.989 | 0.905 | 0.904 | 0.0 | |
| 379059756 | 956 | plasma membrane H+-ATPase [Melastoma mal | 0.989 | 0.905 | 0.907 | 0.0 | |
| 225452678 | 955 | PREDICTED: ATPase 4, plasma membrane-typ | 0.989 | 0.906 | 0.908 | 0.0 | |
| 435003 | 956 | H(+)-transporting ATPase [Solanum tubero | 0.989 | 0.905 | 0.903 | 0.0 | |
| 224121558 | 966 | autoinhibited H+ ATPase [Populus trichoc | 0.989 | 0.896 | 0.898 | 0.0 |
| >gi|356572262|ref|XP_003554288.1| PREDICTED: ATPase 11, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1602 bits (4149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 795/866 (91%), Positives = 835/866 (96%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E M VLKEAVDLENVP+EEVF+TLRC+ GL+TE+AEERL IFG+NKLEEK+ES
Sbjct: 1 MAEKEEAMRVVLKEAVDLENVPLEEVFQTLRCDSNGLTTESAEERLAIFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K+LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+K LRDGKW+EEDA+ILVPGDIISVKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKFLRDGKWVEEDASILVPGDIISVKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKG GDSVYSGSTCKQGEI AVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGHGDSVYSGSTCKQGEINAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHR+YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEIFAKGVD D
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEIFAKGVDVD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARA+R+ENQDAIDA+IVGML DPKEARA IQEVHFLPFNPTDKRTA+TYIDSE
Sbjct: 361 TVVLMAARAARLENQDAIDASIVGMLGDPKEARAGIQEVHFLPFNPTDKRTAITYIDSES 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL RNKSEIERRVH++IDKFA+RGLRSLAVAYQEVPDG+KES GGP
Sbjct: 421 KMHRVSKGAPEQILNLARNKSEIERRVHSVIDKFADRGLRSLAVAYQEVPDGKKESQGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGL+PLFDPPRHDSA+TIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAQTIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI LPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIATLPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLAEIFTTG+IL
Sbjct: 661 VLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPYPDSWKLAEIFTTGIIL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+TDFFP+TFGVSSL +KD DD++KLASAIYLQVST+SQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYKTDFFPQTFGVSSLQKKDRDDFRKLASAIYLQVSTVSQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
RARSWSFV+RPGLLLV AF +AQLIATLIAVYANWSFAAIEG+GWGWAGVVWLYNL+FYI
Sbjct: 781 RARSWSFVERPGLLLVAAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLDFIKF IRYALSG+AWDLVIEQR+
Sbjct: 841 PLDFIKFIIRYALSGRAWDLVIEQRI 866
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449461911|ref|XP_004148685.1| PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis sativus] gi|449505851|ref|XP_004162585.1| PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1600 bits (4144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/866 (92%), Positives = 833/866 (96%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAV+KEAVDLENVP+EEVF+TLRCNK GL+TEAA ERL IFG+NKLEEK+ES
Sbjct: 1 MGDKDEVLEAVVKEAVDLENVPLEEVFQTLRCNKNGLTTEAAHERLAIFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K+LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLLLINSTISFIEENN
Sbjct: 61 KLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW+EE+A++LVPGDIISVKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMAHLAPKAKVLRDGKWVEEEASVLVPGDIISVKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSI VGM+VEIIVMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIVVGMVVEIIVMYPIQHRPYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIE+FAKGVD D
Sbjct: 301 MAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFAKGVDVD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASRVENQDAIDAAIVGML+DPKEARA IQEVHFLPFNPTDKRTALTY D++
Sbjct: 361 TVVLMAARASRVENQDAIDAAIVGMLSDPKEARAGIQEVHFLPFNPTDKRTALTYTDTDS 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKSEIERRVHA+IDKFAERGLRSLAVAYQEV DGRKES GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQEVSDGRKESHGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI LPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESISGLPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALI++FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIF TG+IL
Sbjct: 661 VLGFMLLALIYQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFGTGIIL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+TDFFPRTFGVSSL +KD DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYKTDFFPRTFGVSSLQKKDEDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV AF +AQLIATLIAVYANWSFAAIEG+GWGWAGVVWLYNLIFY
Sbjct: 781 RSRSWSFVERPGLLLVAAFIIAQLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYF 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLD IKF IRYA+SG+AWDLVIEQR+
Sbjct: 841 PLDIIKFAIRYAISGRAWDLVIEQRI 866
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456641|ref|XP_002270344.1| PREDICTED: ATPase 11, plasma membrane-type [Vitis vinifera] gi|297734039|emb|CBI15286.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1598 bits (4138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 792/866 (91%), Positives = 834/866 (96%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKE VDLEN+P+EEVFE LRC++EGL++EAA+ERL IFGYN+LEEK+ES
Sbjct: 1 MADKPEVLEAVLKETVDLENIPIEEVFENLRCSREGLTSEAAQERLAIFGYNRLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLLLINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWSEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD +YSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+FAKGVD D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR+ENQDAID AIVGMLADPKEARA IQEVHFLPFNPTDKRTALTYIDSEG
Sbjct: 361 TVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL RNKSEIERRVHA+IDKFAERGLRSLAVAYQEVPDGRKES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLARNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTG++L
Sbjct: 661 VLGFMLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G YLAMMTVIFFWAAY+TDFFPR F VS+L + DD++KLASAIYLQVST+SQALIFVT
Sbjct: 721 GSYLAMMTVIFFWAAYKTDFFPRVFHVSTLEKTAHDDFRKLASAIYLQVSTVSQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWS+V+RPGLLLV AF VAQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN+IFYI
Sbjct: 781 RSRSWSYVERPGLLLVGAFLVAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLDFIKF IRYALSG+AWDLVIEQR+
Sbjct: 841 PLDFIKFIIRYALSGRAWDLVIEQRI 866
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297793855|ref|XP_002864812.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] gi|297310647|gb|EFH41071.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1591 bits (4119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 772/866 (89%), Positives = 832/866 (96%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EA+LKE VDLENVP+EEVFE+LRC++EGL+TEAA+ERL +FG+NKLEEK+ES
Sbjct: 1 MGDKEEVLEAILKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAI LANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W E+DAAILVPGDI+S+KLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIVSIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQS+LTGESLPVTKGPGD VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAA+ASR+ENQDAIDAAIVGMLADPKEARA ++EVHFLPFNPTDKRTALTYIDS+G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NK+EIERRVHA+IDKFAERGLRSLAVAYQEVP+G KES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFWAAY+TDFFPRTFGVS+L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 721 GSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWS+V+RPG+ LV+AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN++FYI
Sbjct: 781 RSRSWSYVERPGMWLVIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLD IKF IRYALSG+AWDLVIEQRV
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVIEQRV 866
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350535937|ref|NP_001234477.1| plasma membrane H+-ATPase [Solanum lycopersicum] gi|5901757|gb|AAD55399.1|AF179442_1 plasma membrane H+-ATPase isoform LHA2 [Solanum lycopersicum] gi|9789539|gb|AAF98344.1|AF275745_1 plasma membrane H+-ATPase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 1589 bits (4115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 784/866 (90%), Positives = 828/866 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC KEGL+ AA+ERL IFGYNKLEEK+ES
Sbjct: 1 MGEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLTGTAAQERLAIFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWNEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+E+FAKGVDAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR ENQDAID AIVGML+DPKEARA I+E+HFLPFNPTDKRTALTY+D EG
Sbjct: 361 TVVLMAARASRTENQDAIDTAIVGMLSDPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSL VAYQEVP+GRKESSGGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESSGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI +LP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESIASLPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+TDFFPR FGVS+L DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYETDFFPRVFGVSTLQRTATDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV+AF +AQL+ATLIAVYA+WSFAAIEG+GWGWAGV+WLYNL+FY
Sbjct: 781 RSRSWSFVERPGLLLVVAFLIAQLVATLIAVYASWSFAAIEGIGWGWAGVIWLYNLVFYF 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLD IKF IRYALSG+AWDLV+EQR+
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVLEQRI 866
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|170206|gb|AAA34052.1| H+-translocating ATPase [Nicotiana plumbaginifolia] | Back alignment and taxonomy information |
|---|
Score = 1588 bits (4111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 783/866 (90%), Positives = 829/866 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC KEGLS AA+ERL IFGYNKLEEK+ES
Sbjct: 1 MGEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLSGPAAQERLAIFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW E+DAAILVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWDEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+E+FAKGVDAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR ENQDAID AIVGML+DPKEARA I+E+HFLPFNPTDKRTALTY+D EG
Sbjct: 361 TVVLMAARASRTENQDAIDTAIVGMLSDPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKS+IERRVH++IDKFAERGLRSL VAYQEVP+GRKES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHSVIDKFAERGLRSLGVAYQEVPEGRKESTGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI +LP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESIASLPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+TDFFPR FGVS+L + DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYETDFFPRVFGVSTLQKTATDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV+AF +AQL+ATLIAVYANW+FAAIEG+GWGWAGV+WLYNL+FY
Sbjct: 781 RSRSWSFVERPGLLLVVAFLIAQLVATLIAVYANWAFAAIEGIGWGWAGVIWLYNLVFYF 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLD IKF IRYALSG+AWDLV+EQR+
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVLEQRI 866
|
Source: Nicotiana plumbaginifolia Species: Nicotiana plumbaginifolia Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|379059756|gb|AFC88896.1| plasma membrane H+-ATPase [Melastoma malabathricum] | Back alignment and taxonomy information |
|---|
Score = 1588 bits (4111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 786/866 (90%), Positives = 829/866 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKEAVDLEN+P+EEVFE LRC+KEGL+T++AEERL IFG NKLEEK+ES
Sbjct: 1 MGEKPEVLEAVLKEAVDLENIPIEEVFENLRCSKEGLTTQSAEERLAIFGQNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLFINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWSEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQ RKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQRRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+FAKGVD D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR ENQDAID+AIVGMLADPKEAR+ IQEVHFLPFNPTDKRTALTYIDSEG
Sbjct: 361 TVVLMAARASRTENQDAIDSAIVGMLADPKEARSGIQEVHFLPFNPTDKRTALTYIDSEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
+MHRVSKGAPEQILN NKSEIERRVHA+IDKFAERGLRSLAVAYQEVP+GRKES GGP
Sbjct: 421 RMHRVSKGAPEQILNPAHNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESPGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ AI KETGRRLGMG NMYPSSA
Sbjct: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQFAIGKETGRRLGMGINMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLI+AILNDGT+MTISKDRVKPSPLPDSWKLAEIFTTG++L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIVAILNDGTVMTISKDRVKPSPLPDSWKLAEIFTTGIVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G YLAMMTVIFFWAAY+T+FFPR FGV++L + DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GSYLAMMTVIFFWAAYETNFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+R WS+V+RPGLLL+ AF +AQLIATLIAVYA+W FAAIEG+GWGWAGV+WLYN+IFYI
Sbjct: 781 RSRGWSYVERPGLLLIAAFVIAQLIATLIAVYASWGFAAIEGIGWGWAGVIWLYNIIFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLDFIKFFIRYALSGKAWDLVIEQR+
Sbjct: 841 PLDFIKFFIRYALSGKAWDLVIEQRI 866
|
Source: Melastoma malabathricum Species: Melastoma malabathricum Genus: Melastoma Family: Melastomataceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452678|ref|XP_002282263.1| PREDICTED: ATPase 4, plasma membrane-type isoform 1 [Vitis vinifera] gi|296087777|emb|CBI35033.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1587 bits (4109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/866 (90%), Positives = 828/866 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKEAVDLEN+P+EEVF+ LRCN GLSTEAA ERL IFG+NKLEEK+ES
Sbjct: 1 MADKPEVLEAVLKEAVDLENIPIEEVFQNLRCNANGLSTEAANERLAIFGHNKLEEKEES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K+LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL INSTISFIEENN
Sbjct: 61 KVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLFINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW EEDAAILVPGDIIS+KLGDI+PADARLL+GDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWSEEDAAILVPGDIISIKLGDILPADARLLDGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVM+PIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMFPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIE+F KGVD D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFGKGVDPD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
V+LMAARASR+ENQDAID AIVGMLADP+EARA IQEVHFLPFNPTDKRTALTYID +G
Sbjct: 361 TVILMAARASRLENQDAIDTAIVGMLADPREARAGIQEVHFLPFNPTDKRTALTYIDGQG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKSEIERRVHA+IDKFA+RGLRSLAVAYQEVPDGRKES GG
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFADRGLRSLAVAYQEVPDGRKESLGGL 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSA+TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFVGLMPLFDPPRHDSADTIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKH+CGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHVCGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRV+PSPLPDSWKLAEIF TGV+L
Sbjct: 661 VLGFMLLALIWRFDFPPFMVLIIAILNDGTIMTISKDRVRPSPLPDSWKLAEIFATGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G YLAMMTVIFFWAAY+TDFFPR F VSSL KD DD +KLASA+YLQVS ISQALIFVT
Sbjct: 721 GSYLAMMTVIFFWAAYETDFFPRVFNVSSLQIKDRDDIRKLASAVYLQVSIISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
RARSWSFV+RPGLLLV+AF +AQLIATLIAVYANWSFAAIEG+GWGWAGV+WLYNL+ YI
Sbjct: 781 RARSWSFVERPGLLLVVAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNLVCYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLDFIKF IRYALSGKAWDLVIEQR+
Sbjct: 841 PLDFIKFIIRYALSGKAWDLVIEQRI 866
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|435003|emb|CAA54046.1| H(+)-transporting ATPase [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 1586 bits (4107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 782/866 (90%), Positives = 827/866 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC KEGL+ AA+ERL IFGYNKLEEK+ES
Sbjct: 1 MGEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLTGTAAQERLAIFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW EEDAA+LVPGDIIS+KLGDI+PAD RLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWNEEDAAVLVPGDIISIKLGDIVPADRRLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+E+FAKGVDAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR ENQDAID AIVGML+DPKEARA I+E+HFLPFNPTDKRTALTY+D EG
Sbjct: 361 TVVLMAARASRTENQDAIDTAIVGMLSDPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSL VAYQEVP+GRKESSGGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESSGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI +LP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESIASLPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+TDFFPR FGVS+L DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYETDFFPRVFGVSTLQRTATDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV+AF +AQL+ATLIAVYA+WSFAAIEG+GWGWAGV+WLYNL+FY
Sbjct: 781 RSRSWSFVERPGLLLVVAFLIAQLVATLIAVYASWSFAAIEGIGWGWAGVIWLYNLVFYF 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLD IKF IRYALSG+AWDLV+EQR+
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVLEQRI 866
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121558|ref|XP_002318614.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222859287|gb|EEE96834.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1584 bits (4102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/876 (89%), Positives = 834/876 (95%), Gaps = 10/876 (1%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKE VDLEN+P+EEV E LRC++EGL+T+AAEERL IFG+NKLEEK+E
Sbjct: 1 MGDKGEVLEAVLKETVDLENIPIEEVLENLRCSREGLTTQAAEERLAIFGHNKLEEKKER 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W E+DAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QK----------VLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIP 290
QK VLTAIGNFCICSIA+GM++E+IVMYPIQ RKYRPGIDNLLVLLIGGIP
Sbjct: 241 QKARRYNCYMIFVLTAIGNFCICSIAIGMVIELIVMYPIQDRKYRPGIDNLLVLLIGGIP 300
Query: 291 IAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI 350
IAMPTVLSVTMAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLI
Sbjct: 301 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 360
Query: 351 EIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKR 410
E+FAKGVDADAVVLMAARASR+ENQDAID AIVGMLADPKEARA IQEVHFLPFNPTDKR
Sbjct: 361 EVFAKGVDADAVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKR 420
Query: 411 TALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVP 470
TALTYIDS GKMHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSLAVAYQEVP
Sbjct: 421 TALTYIDSGGKMHRVSKGAPEQILNLSHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP 480
Query: 471 DGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530
+GRKES+GGPWQFIGL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLG
Sbjct: 481 EGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 540
Query: 531 MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT 590
MGTNMYPSSALLGQNKDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT
Sbjct: 541 MGTNMYPSSALLGQNKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT 600
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650
GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 601 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 660
Query: 651 IYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL 710
IYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL
Sbjct: 661 IYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL 720
Query: 711 AEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVS 770
AEIFTTG++LG YLAMMTVIFFW AY+TDFFPR FGVS+L + DD++KLASAIYLQVS
Sbjct: 721 AEIFTTGIVLGSYLAMMTVIFFWVAYKTDFFPRVFGVSTLEKTAHDDFRKLASAIYLQVS 780
Query: 771 TISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGV 830
TISQALIFVTR+RSWSFV+RPGLLLV+AF +AQLIATLIAVYANWSFAAI+G+GWGWAGV
Sbjct: 781 TISQALIFVTRSRSWSFVERPGLLLVVAFIIAQLIATLIAVYANWSFAAIKGIGWGWAGV 840
Query: 831 VWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRV 866
+WLYN+IFY PLDFIKFFIRYALSG+AWDLVIEQR+
Sbjct: 841 IWLYNIIFYFPLDFIKFFIRYALSGRAWDLVIEQRI 876
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 875 | ||||||
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.989 | 0.902 | 0.825 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.989 | 0.905 | 0.822 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.979 | 0.903 | 0.736 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.974 | 0.899 | 0.733 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.976 | 0.899 | 0.734 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.981 | 0.900 | 0.725 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.973 | 0.897 | 0.726 | 0.0 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.976 | 0.899 | 0.721 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.979 | 0.891 | 0.713 | 0.0 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.969 | 0.895 | 0.691 | 1.09999999981e-314 |
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3687 (1302.9 bits), Expect = 0., P = 0.
Identities = 715/866 (82%), Positives = 765/866 (88%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
++ E +EAVLKEAVDLENVP+EEVFE LRC+KEGL+T+AA+ERL +FG+NKLEEK+ES
Sbjct: 5 VEDNREVLEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKES 64
Query: 61 KILKFLGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXX 120
K LKFLGFMWNPLSWVME NGGGKPPDWQDFVGI+TLL+INSTISFIEE
Sbjct: 65 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 124
Query: 121 XXXXXXXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
PK+KVLRDG+W E+DAAILVPGDIIS+KLGDI+PADARLLEGDPLKI
Sbjct: 125 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 184
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTK GD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 185 DQSALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHF 244
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGM++EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 245 QQVLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 304
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 305 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDAD 364
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR+ENQDAIDAAIVGMLADPK+ARA IQEVHFLPFNPTDKRTALTYID+EG
Sbjct: 365 TVVLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEG 424
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
HRVSKGAPEQILNL NKSEIERRVHA+IDKFAERGLRSLAVAYQ+VP+GRK+S+GGP
Sbjct: 425 NTHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGP 484
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGV+VKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 485 WQFVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSA 544
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 545 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 604
Query: 601 KKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KK VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 605 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 664
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 665 VLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 724
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFW +Y+TDFFPRTFGV++L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 725 GSYMAMMTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVT 784
Query: 781 RARSWSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYI 840
R+RSWSFV+RPG TLIAVYANWSFAAIE LYN+IFYI
Sbjct: 785 RSRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYI 844
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLDFIKFFIRYALSG+AWDLVIEQRV
Sbjct: 845 PLDFIKFFIRYALSGRAWDLVIEQRV 870
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3682 (1301.2 bits), Expect = 0., P = 0.
Identities = 712/866 (82%), Positives = 765/866 (88%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKE VDLENVP+EEVFE+LRC++EGL+TEAA+ERL +FG+NKLEEK+ES
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXX 120
K LKFLGFMWNPLSWVME NGGGKPPDWQDFVGI+TLL+INSTISFIEE
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 XXXXXXXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
PK+KVLRDG+W E+DAAILVPGDIIS+KLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQS+LTGESLPVTKGPGD VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN GHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAA+ASR+ENQDAIDAAIVGMLADPKEARA ++EVHFLPFNPTDKRTALTYIDS+G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL N++EIERRVHA+IDKFAERGLRSLAVAYQEVP+G KES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KK VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFWAAY+TDFFPRTFGVS+L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 721 GSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVT 780
Query: 781 RARSWSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYI 840
R+RSWS+V+RPG TLIAVYANWSFAAIE LYN++FYI
Sbjct: 781 RSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRV 866
PLD IKF IRYALSG+AWDLVIEQRV
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVIEQRV 866
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3294 (1164.6 bits), Expect = 0., P = 0.
Identities = 634/861 (73%), Positives = 714/861 (82%)
Query: 5 AETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILK 64
A +E ++ E VDLE +P+EEVF+ L+C++EGLS E RL IFG NKLEEK+ESK+LK
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 65 FLGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXX 124
FLGFMWNPLSWVME NGGGKPPDWQDFVGIV LL+INSTISF+EE
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 125 XXXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSA 184
PK+KVLRDGKW E++A+ILVPGDI+S+KLGDIIPADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 185 LTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVL 244
LTGESLP TKGPG+ V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 245 TAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304
TAIGNFCICSIAVG+ +EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 305 SHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVL 364
SH+LS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE++ KGV+ D V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 365 MAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHR 424
AARASRVENQDAIDAA+VGMLADPKEARA I+E+HFLPFNP DKRTALT+IDS G HR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 425 VSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFI 484
VSKGAPEQIL+L ++++ +RVH+ IDK+AERGLRSLAV+ Q VP+ KESSG PW+F+
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ 544
G++PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIAKETGRRLGMG+NMYPSS+LLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 545 NKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXX 604
+KDE++ +PV++LIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 605 XXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 664
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 665 MLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYL 724
ML+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TGV+LGGY+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 725 AMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARS 784
A+MTV+FFWAAY+TDFFPRTF V L + ++ SA+YLQVS +SQALIFVTR+RS
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSE----HEMMSALYLQVSIVSQALIFVTRSRS 777
Query: 785 WSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDF 844
WSF +RPG T IAVY NW FA I+ LY+++FY PLD
Sbjct: 778 WSFTERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDI 837
Query: 845 IKFFIRYALSGKAWDLVIEQR 865
+KF IRY L+G AW +I+ R
Sbjct: 838 MKFAIRYILAGTAWKNIIDNR 858
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3257 (1151.6 bits), Expect = 0., P = 0.
Identities = 629/857 (73%), Positives = 704/857 (82%)
Query: 9 EAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGF 68
+ + KE VDLE +P+EEVFE L+C+KEGLS++ +RL IFG NKLEEK E+K LKFLGF
Sbjct: 8 DEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGF 67
Query: 69 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXXX 128
MWNPLSWVME NGGGK PDWQDF+GI+ LL+INSTISFIEE
Sbjct: 68 MWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAAL 127
Query: 129 XXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGE 188
PK+KVLRDGKW E++A+ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248
SLP TK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLT+IG
Sbjct: 188 SLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EI++MYPIQHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAAR 368
S QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+LIE+F K +D+D+VVLMAAR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAAR 367
Query: 369 ASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKG 428
ASR+ENQDAIDA+IVGML DPKEARA I EVHFLPFNP DKRTA+TYID G HR SKG
Sbjct: 368 ASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKG 427
Query: 429 APEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMP 488
APEQI+ L + E +R+ H +ID FAERGLRSL VA Q VP+ KES G PW+F+GL+P
Sbjct: 428 APEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE 548
LFDPPRHDSAETIRRAL LGVNVKMITGDQLAI ETGRRLGMGTNMYPS++LLG +KDE
Sbjct: 488 LFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDE 547
Query: 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXX 608
S+V +P+DELIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 548 SLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 607
Query: 609 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 608 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 667
Query: 669 LIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMT 728
LIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGV+LG Y+A+ T
Sbjct: 668 LIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMALTT 727
Query: 729 VIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFV 788
V+FFW A+ TDFF +TFGV S+ + ++L +A+YLQVS ISQALIFVTR+RSWSFV
Sbjct: 728 VLFFWLAHDTDFFSKTFGVRSIQGNE----EELMAALYLQVSIISQALIFVTRSRSWSFV 783
Query: 789 DRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFF 848
+RPG TLIAVYANW FA I +Y++I YIPLD +KF
Sbjct: 784 ERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFI 843
Query: 849 IRYALSGKAWDLVIEQR 865
IRYAL+GKAWD +I Q+
Sbjct: 844 IRYALTGKAWDNMINQK 860
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3253 (1150.2 bits), Expect = 0., P = 0.
Identities = 630/858 (73%), Positives = 709/858 (82%)
Query: 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLG 67
+E + E VDLE +P+EEVF+ L+C +EGL+T+ E+R+ IFG NKLEEK+ESKILKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXX 127
FMWNPLSWVME NG +PPDWQDFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
PK+KVLRDGKW E++AAILVPGDI+S+KLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+ +EI+VMYPIQHRKYR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
LS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+E+F KGV+ D V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 RASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSK 427
ASRVENQDAIDAA+VGMLADPKEARA I+EVHFLPFNP DKRTALTYIDS+G HRVSK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 428 GAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487
GAPEQIL+L + ++ ++V + IDK+AERGLRSLAVA Q VP+ KES GGPW+F+GL+
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+ALLG +KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
+I ++PV+ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFML+
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727
ALIW+FDF FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TG++LGGY A+M
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSF 787
+VIFFWAA++TDFF FGV S+ +D +D +L A+YLQVS ISQALIFVTR+RSWSF
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSI--RDNND--ELMGAVYLQVSIISQALIFVTRSRSWSF 779
Query: 788 VDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKF 847
V+RPG TLIAVYA+W+FA ++ +Y+++ Y P D +KF
Sbjct: 780 VERPGALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKF 839
Query: 848 FIRYALSGKAWDLVIEQR 865
IRY LSGKAW + + R
Sbjct: 840 AIRYILSGKAWASLFDNR 857
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3243 (1146.7 bits), Expect = 0., P = 0.
Identities = 626/863 (72%), Positives = 701/863 (81%)
Query: 3 SKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKI 62
+K + + + E +DLE +P+EEV LRC +EGL+++ + RL IFG NKLEEK+E+K+
Sbjct: 4 NKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENKV 63
Query: 63 LKFLGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXX 122
LKFLGFMWNPLSWVME NGGG+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 64 LKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAG 123
Query: 123 XXXXXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182
PK+KVLRDGKW E++AAILVPGDIIS+KLGDI+PAD RLL+GDPLKIDQ
Sbjct: 124 NAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQ 183
Query: 183 SALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQK 242
SALTGESLPVTK PG VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ+GHFQK
Sbjct: 184 SALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQK 243
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIA+GM++EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 244 VLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303
Query: 303 IGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAV 362
IGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+++E+F K +D D +
Sbjct: 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQL 363
Query: 363 VLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKM 422
++ AARASRVENQDAIDA IVGML DP+EAR I EVHF PFNP DKRTA+TYID+ G
Sbjct: 364 LVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNW 423
Query: 423 HRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQ 482
HRVSKGAPEQI+ L + + +R H IIDKFA+RGLRSLAV Q V + K S G PWQ
Sbjct: 424 HRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQ 483
Query: 483 FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL 542
F+GL+PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALL
Sbjct: 484 FLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 543
Query: 543 GQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ+KDESI +LPVDELIEKADGFAGVFPEHKYEIVKRLQ KHICGMTGDGVNDAPALK+
Sbjct: 544 GQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKR 603
Query: 603 XXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 604 ADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVM 663
Query: 663 GFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGG 722
GFMLLALIWKFDF PFMVLI+AILNDGTIMTISKDRVKPSPLPDSWKL EIF TGV+LG
Sbjct: 664 GFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGT 723
Query: 723 YLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRA 782
YLA+MTV+FFWAA TDFF FGV S+ +L +A+YLQVS +SQALIFVTR+
Sbjct: 724 YLAVMTVVFFWAAESTDFFSAKFGVRSISGNP----HELTAAVYLQVSIVSQALIFVTRS 779
Query: 783 RSWSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPL 842
RSWS+V+RPG TLIAVYANW+FA I LY+++FYIPL
Sbjct: 780 RSWSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPL 839
Query: 843 DFIKFFIRYALSGKAWDLVIEQR 865
D +KF IRY+LSG+AWD VIE +
Sbjct: 840 DILKFIIRYSLSGRAWDNVIENK 862
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3205 (1133.3 bits), Expect = 0., P = 0.
Identities = 623/857 (72%), Positives = 699/857 (81%)
Query: 9 EAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGF 68
+ + KE VDLE +P++EVF+ L+C++EGLS+E RL IFG NKLEEK E+K LKFLGF
Sbjct: 8 DEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGF 67
Query: 69 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXXX 128
MWNPLSWVME NGGG+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 68 MWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAAAAL 127
Query: 129 XXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGE 188
PK+KVLRDG+W E++AAILVPGD+IS+KLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248
SLP TK GD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLTAIG
Sbjct: 188 SLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EII+MYPIQHRKYR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAAR 368
S QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F+K VD D V+L++AR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSAR 367
Query: 369 ASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKG 428
ASRVENQDAID +IV ML DPKEARA I EVHFLPFNP +KRTA+TYID+ G+ HR SKG
Sbjct: 368 ASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKG 427
Query: 429 APEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMP 488
APEQI+ L K E +RR H IIDKFAERGLRSL VA Q VP+ KES+G PW+F+GL+P
Sbjct: 428 APEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE 548
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSS+LL +NKD+
Sbjct: 488 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDD 546
Query: 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXX 608
+ +PVDELIEKADGFAGVFPEHKYEIV++LQ RKHI GMTGDGVNDAPALKK
Sbjct: 547 TTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIA 606
Query: 609 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 607 VDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 666
Query: 669 LIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMT 728
LIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGV+LG Y+A++T
Sbjct: 667 LIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMALVT 726
Query: 729 VIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFV 788
V+FFW A+ T FF FGV SL KD ++L + +YLQVS ISQALIFVTR+RSWSFV
Sbjct: 727 VVFFWLAHDTTFFSDKFGVRSLQGKD----EELIAVLYLQVSIISQALIFVTRSRSWSFV 782
Query: 789 DRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFF 848
+RPG TLIA YA+W FA I+ +Y+++ YIPLD +KF
Sbjct: 783 ERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFI 842
Query: 849 IRYALSGKAWDLVIEQR 865
RY LSGKAW+ +IE R
Sbjct: 843 TRYTLSGKAWNNMIENR 859
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3200 (1131.5 bits), Expect = 0., P = 0.
Identities = 619/858 (72%), Positives = 697/858 (81%)
Query: 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLG 67
++ + E+VDL +PMEEVFE L+C K+GL+ A RL +FG NKLEEK+ESK+LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXX 127
FMWNPLSWVME NGGG+PPDWQDFVGIV LLLINSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
PK+KVLRD +W E++A+ILVPGD+IS+KLGDIIPADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247
ES+PVTK P D V+SGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+IVE++VMYPIQ R+YR GIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
L QGAITKRMTAIEEMAGMDVLC DKTGTLTLNKL+VDKNL+E+FAKGV + V L+AA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 368 RASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSK 427
RASR+ENQDAIDAAIVGMLADPKEARA ++EVHF PFNP DKRTALTY+DS+G HR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 428 GAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487
GAPEQILNL K ++ R+VH +IDKFAERGLRSLAVA QEV + +K++ GGPWQ +GL+
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM +
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727
ALIW+FDF PFMVLIIAILNDGTIMTISKDR+KPSP PDSWKL +IF+TGV+LGGY A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSF 787
TV+FFW +DFF FGV L ++ +++ +A+YLQVS ISQALIFVTR+RSWS+
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRP----EQMMAALYLQVSIISQALIFVTRSRSWSY 779
Query: 788 VDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKF 847
+ PG T IAVYANWSFA IE LY+ + YIPLD +KF
Sbjct: 780 AECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKF 839
Query: 848 FIRYALSGKAWDLVIEQR 865
IRY LSGKAW ++E +
Sbjct: 840 GIRYVLSGKAWLNLLENK 857
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3183 (1125.5 bits), Expect = 0., P = 0.
Identities = 620/869 (71%), Positives = 702/869 (80%)
Query: 6 ETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKF 65
E ++A+ E++DLENVP+EEVF+ L+C KEGL++ +ERLT+FGYNKLEEK+ESKILKF
Sbjct: 5 EALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKF 64
Query: 66 LGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXX 125
LGFMWNPLSWVME +GGGKP D+ DFVGIV LLLINSTISF+EE
Sbjct: 65 LGFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAA 124
Query: 126 XXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSAL 185
PK+K +RDGKW E DAA LVPGDI+S+KLGDIIPADARLLEGDPLKIDQ+ L
Sbjct: 125 AALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATL 184
Query: 186 TGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLT 245
TGESLPVTK PG SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST GHFQKVLT
Sbjct: 185 TGESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLT 244
Query: 246 AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305
AIGNFCICSIAVGM +EI+V+Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+
Sbjct: 245 AIGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGA 304
Query: 306 HRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLM 365
HRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE+F +G+D D VLM
Sbjct: 305 HRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLM 364
Query: 366 AARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRV 425
AARA+R+ENQDAID AIV ML+DPKEARA I+E+HFLPF+P ++RTALTY+D EGKMHRV
Sbjct: 365 AARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRV 424
Query: 426 SKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIG 485
SKGAPE+IL++ NK EI+ +VHA IDKFAERGLRSL +AYQEVPDG + GGPW F+
Sbjct: 425 SKGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVA 484
Query: 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQN 545
L+PLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAIAKETGRRLGMGTNMYPSS+LL N
Sbjct: 485 LLPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDN 544
Query: 546 KDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXX 605
E + VDELIE ADGFAGVFPEHKYEIVKRLQ+RKHICGMTGDGVNDAPALKK
Sbjct: 545 NTEGV---SVDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADI 601
Query: 606 XXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 665
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+GFM
Sbjct: 602 GIAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFM 661
Query: 666 LLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 725
LL + W+FDFPPFMVL+IAILNDGTIMTISKDRVKPSP PD WKL EIF TGV+LG YLA
Sbjct: 662 LLCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLA 721
Query: 726 MMTVIFFWAAYQTDFFPRTFGVSSL--HEKDIDDWK-------KLASAIYLQVSTISQAL 776
+MTV+FFWAAY+T+FF F V + H + D K ++ASA+YLQVSTISQAL
Sbjct: 722 IMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQAL 781
Query: 777 IFVTRARSWSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNL 836
IFVTR+RSWSFV+RPG ++I+ ANW FA I ++N+
Sbjct: 782 IFVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNI 841
Query: 837 IFYIPLDFIKFFIRYALSGKAWDLVIEQR 865
+ Y+ LD IKF +RYALSGK+WD ++E R
Sbjct: 842 VTYMLLDPIKFLVRYALSGKSWDRMVEGR 870
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3018 (1067.4 bits), Expect = 1.1e-314, P = 1.1e-314
Identities = 590/853 (69%), Positives = 682/853 (79%)
Query: 13 KEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNP 72
++ +DL +P+EEVFE LR + +GL + AEERL IFG N+LEEKQE++ +KFLGFMWNP
Sbjct: 17 RKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGFMWNP 76
Query: 73 LSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXXXXXXX 132
LSWVME N PDW+DF GIV LLLIN+TISF EE
Sbjct: 77 LSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAALMARL 136
Query: 133 XPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPV 192
K++VLRDG+W E+DA+ILVPGDIIS+KLGDIIPADARLLEGDPLKIDQS LTGESLPV
Sbjct: 137 ALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGESLPV 196
Query: 193 TKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNFCI 252
TK G+ V+SGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IGNFCI
Sbjct: 197 TKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIGNFCI 256
Query: 253 CSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQG 312
CSIAVGM++EII+M+P+QHR YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRLS QG
Sbjct: 257 CSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQG 316
Query: 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV 372
AITKRMTAIEEMAGMDVLC DKTGTLTLN L+VDKNLIE+F +D D ++L+A RASR+
Sbjct: 317 AITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRL 376
Query: 373 ENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQ 432
ENQDAIDAAIV MLADP+EARANI+E+HFLPFNP DKRTA+TYIDS+GK +R +KGAPEQ
Sbjct: 377 ENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQ 436
Query: 433 ILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDP 492
+LNL + K+EI +RV+AIID+FAE+GLRSLAVAYQE+P+ S GGPW+F GL+PLFDP
Sbjct: 437 VLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDP 496
Query: 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVA 552
PRHDS ETI RAL+LGV VKMITGDQLAIAKETGRRLGMGTNMYPSS+LLG N DE A
Sbjct: 497 PRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EA 555
Query: 553 LPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXX 612
+PVDELIE ADGFAGVFPEHKYEIVK LQ KH+ GMTGDGVNDAPALKK
Sbjct: 556 IPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADA 615
Query: 613 XXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK 672
VLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRIVLGF LLALIW+
Sbjct: 616 TDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLALIWE 675
Query: 673 FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFF 732
+DFPPFMVLIIAILNDGTIMTISKDRV+PSP P+SWKL +IF TG+++G YLA++TV+F+
Sbjct: 676 YDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVTVLFY 735
Query: 733 WAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPG 792
W T FF + F V S+ ++++SA+YLQVS ISQALIFVTR+R WSF +RPG
Sbjct: 736 WIIVSTTFFEKHFHVKSIANNS----EQVSSAMYLQVSIISQALIFVTRSRGWSFFERPG 791
Query: 793 XXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYA 852
TLIAVYAN SFA I LY+LIFYIPLD IKF YA
Sbjct: 792 TLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYA 851
Query: 853 LSGKAWDLVIEQR 865
LSG+AW+LV++++
Sbjct: 852 LSGEAWNLVLDRK 864
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.8114 | 0.9771 | 0.9018 | no | no |
| P49380 | PMA1_KLULA | 3, ., 6, ., 3, ., 6 | 0.3917 | 0.848 | 0.8253 | yes | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.8937 | 0.9897 | 0.9058 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8099 | 0.9817 | 0.9023 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4248 | 0.8914 | 0.9689 | yes | no |
| P24545 | PMA1_ZYGRO | 3, ., 6, ., 3, ., 6 | 0.3857 | 0.8457 | 0.8043 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7584 | 0.9691 | 0.8954 | no | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.8994 | 0.9885 | 0.9038 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.9030 | 0.9897 | 0.9058 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8088 | 0.976 | 0.8980 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.7939 | 0.9828 | 0.9014 | no | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.7981 | 0.9737 | 0.8977 | no | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.7890 | 0.976 | 0.8998 | no | no |
| P09627 | PMA1_SCHPO | 3, ., 6, ., 3, ., 6 | 0.3793 | 0.864 | 0.8226 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.9018 | 0.9897 | 0.9058 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7779 | 0.9794 | 0.8917 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.8016 | 0.9748 | 0.8997 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8949 | 0.9897 | 0.9020 | no | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.8195 | 0.9771 | 0.8990 | no | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.8072 | 0.9794 | 0.9030 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.8018 | 0.976 | 0.8998 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.9087 | 0.7017 | 0.8721 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| scaffold_802942.1 | annotation not avaliable (956 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 875 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-177 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-114 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 6e-89 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 7e-83 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 7e-80 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-73 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 5e-70 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-68 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-63 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-63 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 7e-57 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 5e-55 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 3e-54 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 3e-39 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 5e-39 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 6e-33 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-32 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-31 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-30 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-30 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 7e-30 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 9e-26 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-21 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-18 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 2e-16 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 2e-12 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 6e-09 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 6e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 4e-07 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 6e-05 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 7e-04 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.004 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1174 bits (3040), Expect = 0.0
Identities = 459/779 (58%), Positives = 558/779 (71%), Gaps = 27/779 (3%)
Query: 36 GLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP 95
GL++ A++RL +G N+L EK+ S +LKFLGF WNPLSWVMEAAAI+AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 96 DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPG 155
W DFV I+ LLL+N+TI FIEEN AGNA AL SLAPK++VLRDGKW E A+ LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVV 215
D++ +K+GDI+PAD RL EGD +++DQ+ALTGESLPVTK GD YSGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 216 IATGVHTFFGKAAHLVDSTNQQ-GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKY 274
ATG++TFFGKAA LV ST GH QK+L+ IG F I I V +++E++V++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334
R G+ LVLL+GGIPIAMP VLSVTMA+G+ L+ + AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394
TGTLTLNKLS+D+ L F G D D V+L AA ASR E+QDAID A++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 395 NIQEVHFLPFNPTDKRTALTYIDSE-GKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDK 453
+ + F+PF+P DKRT T D E GK +V+KGAP+ IL+L NK EIE +V +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKM 513
A RG R+L VA G W F+GL+PLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 514 ITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHK 573
+TGD LAIAKET RRLG+GTN+Y + LL + + + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL-PSGLGEMVEDADGFAEVFPEHK 522
Query: 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633
YEIV+ LQ R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAARSA+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 634 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMT 693
A+L SR IFQRMK+Y IY ++ TIRIV F LL LI F FPP MV+IIAILNDGTIMT
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 642
Query: 694 ISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEK 753
I+ D VKPS LP W L E+FT +LG YL + T + A T FF FG+ LH
Sbjct: 643 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLLHG- 701
Query: 754 DIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVY 812
L S IYLQVS A IFVTR + + +RPG LL AF +AQ+IAT IAVY
Sbjct: 702 ------NLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754
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This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 534 bits (1379), Expect = e-177
Identities = 266/913 (29%), Positives = 419/913 (45%), Gaps = 92/913 (10%)
Query: 11 VLKEAVDLENVPMEEVFETLRCNK-EGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGF 68
V E +V E+ L + GLS E + RL +G N+L EEK+ S + KFL
Sbjct: 18 VTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQ 77
Query: 69 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAAL 128
+P ++ AA+++ + G D + I+ +++IN+ + F++E A A AL
Sbjct: 78 FKDPFIILLLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL 134
Query: 129 MASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGE 188
+PK+KVLRDGK++E A+ LVPGDI+ ++ GD++PAD RLLE L++D+SALTGE
Sbjct: 135 KKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGE 194
Query: 189 SLPVTKGPGDS--------------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234
SLPV K ++SG+T G + +V+ATG T FGK A L+ +
Sbjct: 195 SLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK 254
Query: 235 NQ-QGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNL----LVLLIGGI 289
+ + Q+ L +G F + V +V +++ + + G+ L L + +
Sbjct: 255 KEVKTPLQRKLNKLGKF----LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAV 310
Query: 290 PIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL 349
P +P V+++ +A+G+ R++ AI + + AIE + +DV+CSDKTGTLT NK++V K
Sbjct: 311 PEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIY 370
Query: 350 I-----EIFAKGVDADAVVLMAARASRVEN------------QDAIDAAIV------GML 386
I +I K + +L A+ + N D + A+V G
Sbjct: 371 INGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFS 430
Query: 387 ADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILN-------LVRN 439
D + +PF+ KR ++ EGK KGAPE IL L
Sbjct: 431 LDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPL 490
Query: 440 KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQ----FIGLMPLFDPPRH 495
E R + + + A GLR LAVAY+++ K+ + F+GL + DPPR
Sbjct: 491 TEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPRE 550
Query: 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ---NKDESIVA 552
D E I G+ V MITGD + A + G+ + + G + +A
Sbjct: 551 DVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELA 610
Query: 553 LPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD- 611
EL+E+ FA V PE K IV+ LQ H+ MTGDGVNDAPALK AD+GIA+
Sbjct: 611 ----ELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE 666
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIW 671
TDAA+ A+DIVL + + I+ AV+ R ++ +K + +Y +S + VL ++ +L
Sbjct: 667 GTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFN 726
Query: 672 KFDFP--PFMVLIIAILNDGTI---MTISK---DRVKPSPLPDSWKLAEIFTTGVILGGY 723
F P P +L I +L D + + D +K P +F +
Sbjct: 727 LFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRG---PEEGLFNRKIFWRFI 783
Query: 724 L--AMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTR 781
L +++ I F + + F ++L L + + + I L R
Sbjct: 784 LIIGLLSAILFILTFL--LYLLGFIANTLGLDLFQA--LLQTTAFTVLVLIQLLLTLAVR 839
Query: 782 ARS---WSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIF 838
+R S + L LA V ++ LI + + WL +
Sbjct: 840 SRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLF--EWLIAIAV 897
Query: 839 YIPLDFIKFFIRY 851
+ L +I Y
Sbjct: 898 ALLLLYIVVSELY 910
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 358 bits (922), Expect = e-114
Identities = 183/588 (31%), Positives = 282/588 (47%), Gaps = 78/588 (13%)
Query: 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPKSK--VLRDGKWMEEDAAILVPGDIISV 160
I+ L+L+ + ++ A + +L L VLR+G W E A LVPGD++ V
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDSVYSGSTCKQGE 210
K G+ +PAD LL G +D+S LTGES PV K GD V++G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 211 IEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI 269
+ VV TG+ T G+ A +V + + Q + NF I + + ++ + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 270 QH----RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMA 325
+ L++L+ +P A+P ++V +A+G RL+ +G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 326 GMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGM 385
+D LCSDKTGTLT NK+++ + I D + ++ D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPMEKALLKS 294
Query: 386 LADPKEARANIQE---VHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSE 442
+A +E + PF+ KR ++ +G KGAPE IL N E
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNNYEE 354
Query: 443 IERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIR 502
+ A +GLR LA A +E+ D +F+GL+ DP R D+ ETI
Sbjct: 355 -------KYLELARQGLRVLAFASKELEDD--------LEFLGLITFEDPLRPDAKETIE 399
Query: 503 RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562
G+ V MITGD + AK + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 563 DGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 622
D FA V PE K +IV+ LQ + HI MTGDGVNDAPALKKAD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALI 670
VL + LS I+ AV R IF +K+ +A++ + ++ +LL +I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVI 531
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 301 bits (772), Expect = 6e-89
Identities = 215/742 (28%), Positives = 353/742 (47%), Gaps = 99/742 (13%)
Query: 22 PMEEVFETLRCNKE-GL-STEAAEERLTIFGYNKLE-EKQESKILKFLG-FMWNPLSWVM 77
+EE L+ + + GL S++ A R G+N+ + E+ ES KFL F+ NPL ++
Sbjct: 8 SVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 78 EAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSK 137
A+A++++ + N D V I +LI T+ F++E + + AL + P+
Sbjct: 68 IASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECH 120
Query: 138 VLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG-- 195
++R+GK A+ LVPGD++ + +GD +PAD R++E L ID+S LTGE+ PV+K
Sbjct: 121 LIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTA 180
Query: 196 ------PGD------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ-QGHFQK 242
GD + G+ + G + +V+ TG +T FG ++ + + + QK
Sbjct: 181 PIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQK 240
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
+ +G + ++ G+I I ++ Q + + + L + IP +P +++VT+A
Sbjct: 241 SMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLA 299
Query: 303 IGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK--------NLIEIFA 354
+G R+S + AI +++ ++E + ++V+CSDKTGTLT N ++V K ++ +
Sbjct: 300 LGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVS 359
Query: 355 ----KGVDADAVVLMAARASRVENQ---------------------DAIDAAIVGMLA-- 387
V D VL V + D A++ +L
Sbjct: 360 LNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKF 419
Query: 388 ---DPKEARANIQEVHFLPFNPTDK--RTALTYIDSEGKMHRVSKGAPEQILNLVRNKSE 442
D +E + EV PF+ K + +M + KGA EQ+L +
Sbjct: 420 GLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFM-KGAYEQVLKYCTYYQK 475
Query: 443 IERRVHAIID-----------KFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFD 491
+ + + + A GLR +A A G F+GL+ + D
Sbjct: 476 KDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG--------PEKGQLTFLGLVGIND 527
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE-SI 550
PPR E + + GV + MITGD A RRLGM S ++ G+ D
Sbjct: 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSGEKLDAMDD 585
Query: 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
L +++ K FA PEHK +IVK LQ R + MTGDGVNDAPALK ADIG+A+
Sbjct: 586 QQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMG 643
Query: 611 D-ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL 669
TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ L + LA
Sbjct: 644 QTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AALSLIALAT 702
Query: 670 IWKFDFP--PFMVLIIAILNDG 689
+ F P +L I IL DG
Sbjct: 703 LMGFPNPLNAMQILWINILMDG 724
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 7e-83
Identities = 205/758 (27%), Positives = 341/758 (44%), Gaps = 108/758 (14%)
Query: 22 PMEEVFETLRCNKEGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWVMEAA 80
E + L ++ GL+ ERL FG N+ EEK+ + + NP +++ A
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--A 76
Query: 81 AIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR 140
+M ++ D + V I ++L + + FI+E+ A AA AL + + VLR
Sbjct: 77 MLMGVSYLT-----DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLR 131
Query: 141 ------DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPV-- 192
+G E LVPGD+I + GDIIPADAR++ L I+QSALTGESLPV
Sbjct: 132 VINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEK 191
Query: 193 ---TKGPGDS--------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQ 241
K D + G+ G +AVV+ATG T+FG A Q F
Sbjct: 192 FVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFD 251
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGI------------ 289
K + S++ +I ++VM P+ VL+I G+
Sbjct: 252 K--------GVKSVSKLLIRFMLVMVPV-------------VLMINGLMKGDWLEAFLFA 290
Query: 290 --------PIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN 341
P +P ++S +A G+ +S + I K ++AI+ MD+LC+DKTGTLT +
Sbjct: 291 LAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQD 350
Query: 342 KLSVDKNLIEIFAKGVDADAVVLMAARASRVEN--QDAIDAAIVGMLAD--PKEARANIQ 397
K+ ++K+ I + G ++ V+ MA S + ++ +D A++ L + ++ + +
Sbjct: 351 KIELEKH---IDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWK 407
Query: 398 EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSE----------IERRV 447
+V +PF+ +R ++ + + KGA E++L + +K + +
Sbjct: 408 KVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSEL 467
Query: 448 HAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFI--------GLMPLFDPPRHDSAE 499
+ + +G+R +AVA + + + G + DPP+ + E
Sbjct: 468 QDMTAEMNRQGIRVIAVATKTLK-----VGEADFTKTDEEQLIIEGFLGFLDPPKESTKE 522
Query: 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELI 559
I G+NVK++TGD + + +G+ N + A + + DE + +
Sbjct: 523 AIAALFKNGINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARE-----L 577
Query: 560 EKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 619
K FA + P K I+ L+ H G GDG+NDAPAL+KAD+GI+V A D A+ A
Sbjct: 578 RKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637
Query: 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFP--P 677
SDI+L E L V+ V+ R F + Y S V ++ + F P
Sbjct: 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPF-LPMLS 696
Query: 678 FMVLIIAILNDGTIMTISKDRVKPSPL--PDSWKLAEI 713
+LI +L D + +T+ D++ L P W+ +
Sbjct: 697 LHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQWEQKGM 734
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 276 bits (708), Expect = 7e-80
Identities = 204/701 (29%), Positives = 327/701 (46%), Gaps = 106/701 (15%)
Query: 13 KEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMW-- 70
+ +P EE+++T + EGL+ E G N+L ++ L W
Sbjct: 44 ARCLKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHL---WVC 100
Query: 71 --NPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAAL 128
NP + ++ ++ A D I ++ I++ ++FI+E + AA AL
Sbjct: 101 YRNPFNILLTILGAISYATE-------DLFAAGVIALMVAISTLLNFIQEARSTKAADAL 153
Query: 129 MASLAPKSKVLR------DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182
A ++ + VLR + W+E LVPGDII + GD+IPAD R+L+ L + Q
Sbjct: 154 KAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQ 213
Query: 183 SALTGESLPVTKGPGDS-------------VYSGSTCKQGEIEAVVIATGVHTFFGKAAH 229
++LTGESLPV K + G+ G +AVVIATG +T+FG+ A
Sbjct: 214 ASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAG 273
Query: 230 LVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGG 288
V ++ FQ+ I ++ +I ++VM P+ VLLI G
Sbjct: 274 RVSEQDSEPNAFQQ--------GISRVSWLLIRFMLVMAPV-------------VLLING 312
Query: 289 --------------------IPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMD 328
P +P +++ T+A G+ +LS Q I KR+ AI+ MD
Sbjct: 313 YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMD 372
Query: 329 VLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVEN--QDAIDAAIVGML 386
+LC+DKTGTLT +K+ ++ + +I G ++ V+ A S + ++ +D A++ +
Sbjct: 373 ILCTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGV 429
Query: 387 ADPKEAR--ANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNL---VRNKS 441
+ + Q++ +PF+ +R ++ ++ + KGA E+ILN+ VR+
Sbjct: 430 DEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNG 489
Query: 442 EIE-------RRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQ---FIGLMPLFD 491
EI RR+ + D +GLR +AVA + +P + G + D
Sbjct: 490 EIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLD 549
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIV 551
PP+ +A ++ GV VK++TGD +A + +G+ L+G + I
Sbjct: 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLIGSD----IE 601
Query: 552 ALPVDEL---IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
L DEL E+ FA + P HK IV L+ H+ G GDG+NDAPAL+ ADIGI+
Sbjct: 602 TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGIS 661
Query: 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
V A D AR A+DI+L E L V+ V+ R F M Y
Sbjct: 662 VDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 1e-73
Identities = 206/698 (29%), Positives = 324/698 (46%), Gaps = 108/698 (15%)
Query: 22 PMEEVFETLRCNKEGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWV-MEA 79
+EE L +++GL+ E A ERL +G N++ EK +++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 80 AAI---MAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKS 136
AAI L G+ D + I+T++L++ + F +E + AA AL A + +
Sbjct: 91 AAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA 150
Query: 137 KVLR------DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESL 190
VLR + E LVPGDI+ + GD+IPAD RL+E L I Q+ LTGE+L
Sbjct: 151 TVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEAL 210
Query: 191 PVTK--------------GPGDSV---------YSGSTCKQGEIEAVVIATGVHTFFGKA 227
PV K D + G+ G AVV+ATG T+FG
Sbjct: 211 PVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270
Query: 228 AHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIG 287
A + T Q F + + S++ +I ++VM P+ VLLI
Sbjct: 271 AKSIVGTRAQTAFDR--------GVNSVSWLLIRFMLVMVPV-------------VLLIN 309
Query: 288 GI--------------------PIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGM 327
G P +P ++S +A G+ ++ + + KR+ AI+ M
Sbjct: 310 GFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAM 369
Query: 328 DVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVEN--QDAIDAAIV-- 383
DVLC+DKTGTLT +++ ++ +L G + V+ +A S ++ ++ +D A+V
Sbjct: 370 DVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAF 426
Query: 384 GMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNL------- 436
A ++V LPF+ +R ++ D++G+ + KGA E++L +
Sbjct: 427 AEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDG 486
Query: 437 --VRNKSEIER-RVHAIIDKFAERGLRSLAVAYQEVPDG---RKESSGGPWQFI--GLMP 488
VR E R R+ A+ + + G R L VA +E+P G + S+ + G +
Sbjct: 487 DTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLT 546
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE 548
DPP+ +A I GV VK++TGD + + R +G+ P LLG
Sbjct: 547 FLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTE--- 599
Query: 549 SIVALPVDEL---IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605
I A+ L +E+ FA + P K ++K LQA H G GDG+NDAPAL+ AD+
Sbjct: 600 -IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADV 658
Query: 606 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643
GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 659 GISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 249 bits (637), Expect = 5e-70
Identities = 229/921 (24%), Positives = 375/921 (40%), Gaps = 173/921 (18%)
Query: 79 AAAIMAIALA---NGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPK 135
AA ++ LA G + + I+ +L+ N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 136 SKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195
+KVLRDG+W A LVPGDI+ + +GD +PAD R+L L++DQS LTGES+ V K
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 196 ----PGDS---------VYSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQQGHFQ 241
P + ++SG+ G+ VV+ TG+ T GK + + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQH--------RKYRPGIDNLLV---LLIGGIP 290
K L G + S +G+I ++ + I H + I + L + IP
Sbjct: 195 KKLDEFGE--LLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIP 252
Query: 291 IAMPTVLSVTMAIGSHRLSLQ------------------------GAITKRMTAIEEMAG 326
+P V++ +A+G+ +++ + G +T ++ ++
Sbjct: 253 EGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVA 312
Query: 327 MD-VLCSDKTGTLTLNKLSVDKNLIE---IFAKGVDA-------------DAVVLMAARA 369
+D S +T + + +I+ A G DA D+ + R
Sbjct: 313 LDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERK 372
Query: 370 SRVENQ-DAIDAA-------------IVGMLADPKEA-------RANIQEVHFLPFNPTD 408
E +A +AA G+ + + A +++ L F +
Sbjct: 373 GVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEF--SR 430
Query: 409 KRTALTYIDSEGKMHRV-SKGAPEQIL---NLVRNKSE--------IERRVHAIIDKFAE 456
R +++ + +++ KGAPE +L + N ++ + ++I +
Sbjct: 431 DRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGT 490
Query: 457 R-GLRSLAVAYQEVPDGRKESSGGPWQ----------FIGLMPLFDPPRHDSAETIRRAL 505
LR LA+A++++PD R+E FIG++ + DPPR + A+ I +
Sbjct: 491 TKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550
Query: 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG- 564
G+ V MITGD A+ RR+G+ P +S DE+
Sbjct: 551 TAGIRVIMITGDNKETAEAICRRIGI---FSPDED----VTFKSFTGREFDEMGPAKQRA 603
Query: 565 -------FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
F+ V P HK E+V+ LQ + I MTGDGVNDAPALKKADIGIA+ T+ A+
Sbjct: 604 ACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAK 663
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLLALIWKFDFP 676
ASD+VL + + I++AV RAI+ MK + Y +S I +V F+ AL
Sbjct: 664 EASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLI 723
Query: 677 PFMVLIIAILNDG-------------TIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGY 723
P +L + ++ DG IM R PL W +F +++G Y
Sbjct: 724 PVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPD-EPLITGW----LFFRYLVVGVY 778
Query: 724 LAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTIS-QALIFVTRA 782
+ + TV F Y F S D +D TIS L+ +
Sbjct: 779 VGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMF 838
Query: 783 RSWSFVDRPGLLLVLAFAVAQLIATLIAVYAN-WSFAAIEGVGWGWAGVVWLYNLIFYIP 841
+ + + LL + + N W AI + L+ LI Y+P
Sbjct: 839 NALNALSEDQSLLR------------MPPWVNKWLIGAI-------CLSMALHFLILYVP 879
Query: 842 LDFIKFFIRYALSGKAWDLVI 862
+ F LS W +V+
Sbjct: 880 F-LSRIFGVTPLSLTDWLMVL 899
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 3e-68
Identities = 180/704 (25%), Positives = 306/704 (43%), Gaps = 82/704 (11%)
Query: 34 KEGLSTEAAEE--RLTIFGYNKLEEKQESKILKFLGFMWNPLSWVM----EAAAIMAIAL 87
EG+ ++ R ++G N+L EK FL +W LS AA++++ L
Sbjct: 57 NEGVRLSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLILLSVAAVVSLVL 113
Query: 88 A------NGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALM-ASLAPKSKVLR 140
W + V I+ +++ ++ + + L A K V+R
Sbjct: 114 GLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIR 173
Query: 141 DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSV 200
G+ + +V GDI+S+ GD++PAD + G L+ID+S++TGES P+ KGP
Sbjct: 174 GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDP 233
Query: 201 Y--SGSTCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQQGHFQKVLTAIGNFCIC 253
+ SG+ +G +V A GV++F GK + DST Q ++ IG F +
Sbjct: 234 FLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMG 293
Query: 254 SIAVGMIVEII--VMYPIQHRKYRPGID-----NLLVLLIGGIPIAMPTVL--SVTMAI- 303
S + +V + V I+ D + ++ + + +A+P L +VT+A+
Sbjct: 294 SAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALA 353
Query: 304 -GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI-----------E 351
++ + + + A E M +CSDKTGTLT N +SV + I
Sbjct: 354 YSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLR 413
Query: 352 IFAKGVDADAVVLMAARASRVENQDA----------IDAAIVGM----LADPKEARANIQ 397
K V V ++ +S E D + A++ L D +E RA +
Sbjct: 414 NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEK 473
Query: 398 EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQIL-----------NLVRNKSEIERR 446
V PFN K ++ S GK KGA E +L + + R
Sbjct: 474 VVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDR 533
Query: 447 VHAIIDKFAERGLRSLAVAYQEVPDG---RKESSGGPWQFIGLMPLFDPPRHDSAETIRR 503
+I+ A LR++ +AY++ RK+ IG++ + DP R E ++
Sbjct: 534 CADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQE 593
Query: 504 ALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKAD 563
G+ V+M+TGD + AK R G+ T + + S+V +D ++ K
Sbjct: 594 CQRAGITVRMVTGDNIDTAKAIARNCGILT---FGGLAMEGKEFRSLVYEEMDPILPKLR 650
Query: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA-TDAARSASDI 622
A P K +V L+ + +TGDG NDAPALK AD+G ++ + T+ A+ ASDI
Sbjct: 651 VLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDI 710
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNY-----TIYAVSITIRIV 661
+L + + I+ AV R ++ ++ + T+ V++ + V
Sbjct: 711 ILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 754
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 4e-63
Identities = 145/580 (25%), Positives = 241/580 (41%), Gaps = 76/580 (13%)
Query: 103 IVTLLLINSTISFIEENNAGNAAAAL--MASLAPKS--KVLRDGKWMEEDAAILVPGDII 158
LL + +EE G A+ AL + +LAP + + DG E L GDI+
Sbjct: 21 GALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIV 80
Query: 159 SVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIAT 218
V+ G+ IP D ++ G+ +D+SALTGES+PV K GD V++G+ G + V
Sbjct: 81 IVRPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKL 139
Query: 219 GVHTFFGKAAHLV-DSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPG 277
G + + LV ++ + + Q++ I ++ + ++ ++ +V +
Sbjct: 140 GEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---GALGA 196
Query: 278 IDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335
+ L +L+ P A+ L+ +AI + +G + K A+E++A + + DKT
Sbjct: 197 LYRALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKT 254
Query: 336 GTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARAN 395
GTLT K +V IE ++ +L A A + + AIV A
Sbjct: 255 GTLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV--------RYAK 304
Query: 396 IQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILN--LVRNKSEIERRVHAIIDK 453
+ + D + + +G V G +I N + E ++++
Sbjct: 305 KRGLE--LPKQED----VEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDLLNE 358
Query: 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV-NVK 512
+G + VA + +G++ L D R ++ E I G +
Sbjct: 359 GESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLV 405
Query: 513 MITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572
M+TGD + A+ LG +DE+ A + PE
Sbjct: 406 MLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPED 435
Query: 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632
K IVK LQ + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS +
Sbjct: 436 KLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSL 495
Query: 633 ISAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFMLLALIW 671
+A+ SR + +K N + I L L +W
Sbjct: 496 PTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLW 535
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 225 bits (577), Expect = 5e-63
Identities = 157/580 (27%), Positives = 238/580 (41%), Gaps = 87/580 (15%)
Query: 101 VGIVTLLLINSTISFIEENNAGNAAAALMASLAPKS--KVLRDGKWMEEDAAILVPGDII 158
++ L L+ + + A A AL+ LAPK+ V DG+ E + GDI+
Sbjct: 178 AMLIFLFLLGRYLEARAKGRARRAIRALLD-LAPKTATVVRGDGEEEEVPVEEVQVGDIV 236
Query: 159 SVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIAT 218
V+ G+ IP D ++ G +D+S LTGESLPV K PGD V++G+ G + V
Sbjct: 237 LVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRV 295
Query: 219 GVHTFFGKAAHLV-DSTNQQGHFQKVLTAI-GNFCICSIAVGMIVEIIVMYPIQHRKYRP 276
G T + LV ++ + + Q++ + F + + + + +
Sbjct: 296 GADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIA-ALTFALWPLFGGGDWET 354
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334
+ L +L+ P A+ L+ AI G R + +G + K A+E +A +D + DK
Sbjct: 355 ALYRALAVLVIACPCAL--GLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDK 412
Query: 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394
TGTLT K V ++ A D D ++ +AA + + AIV K A
Sbjct: 413 TGTLTEGKPEV----TDVVALDGDEDELLALAAALEQHSEH-PLAKAIV------KAAAE 461
Query: 395 -NIQEVHFLPFNPTDKRTALTYIDSEG-----KMHRVSKGAPEQILNLVRNKSEIERRVH 448
+ +V I G RV G L+ + +
Sbjct: 462 RGLPDV-----------EDFEEIPGRGVEAEVDGERVLVGNAR----LLGEEGIDLPLLS 506
Query: 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLG 508
I+ G + VA DG+ +G++ L D R D+ E I LG
Sbjct: 507 ERIEALESEGKTVVFVAV----DGK---------LVGVIALADELRPDAKEAIAALKALG 553
Query: 509 VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568
+ V M+TGD A+ + LG +DE+ A +
Sbjct: 554 IKVVMLTGDNRRTAEAIAKELG------------------------IDEV------RAEL 583
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
PE K EIV+ LQA M GDG+NDAPAL AD+GIA+ TD A A+D+VL
Sbjct: 584 LPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDD 643
Query: 629 LSVIISAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFMLL 667
LS + A+ SRA + +K N I I L L
Sbjct: 644 LSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGL 683
|
Length = 713 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 7e-57
Identities = 78/223 (34%), Positives = 132/223 (59%), Gaps = 4/223 (1%)
Query: 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPK-SKVLRDGKWMEEDAAILVPGDIISVK 161
I+ L+LIN+ + +E A A AL L P + V+RDGK E A LV GDI+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVH 221
GD +PAD R++EG L++D+SALTGESLPV K GD+V++G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 222 TFFGKAAHLV-DSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDN 280
T GK A LV ++ + + Q++L + + I + + + + +++ + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEE 323
L +L+ P A+P + + +A+G+ RL+ +G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 206 bits (525), Expect = 5e-55
Identities = 195/808 (24%), Positives = 342/808 (42%), Gaps = 138/808 (17%)
Query: 4 KAETMEAVLKE-AVDLENVPMEEVFETLRCNKE-GLSTEAAEERLTIFGYNKLEE-KQES 60
K ++ + KE +D + ++E+ + GLS A E L G N L
Sbjct: 2 KKRDLDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTP 61
Query: 61 KILKFLGFMWNPLSWVMEAAAIMA-IAL---ANGGGKPPDWQDFVGIV--TLLLINSTIS 114
+ +KF ++ S ++ AI+ +A A+ +P + ++G+V +++I S
Sbjct: 62 EWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFS 121
Query: 115 FIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE 174
+ +E + + + ++ V+RDG+ M +A +V GD++ VK GD IPAD R++
Sbjct: 122 YYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIIS 181
Query: 175 GDPLKIDQSALTGESLPVTKGPG----------DSVYSGSTCKQGEIEAVVIATGVHTFF 224
K+D S+LTGES P T+ P + + + C +G +V+ TG T
Sbjct: 182 AQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVM 241
Query: 225 GKAAHLVDSTNQQG--------HFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRP 276
G+ A L HF ++T + F S I+ +I+ Y +
Sbjct: 242 GRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGY-----TWLE 293
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTG 336
+ L+ +++ +P + ++V + + + R++ + + K + A+E + +CSDKTG
Sbjct: 294 AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 353
Query: 337 TLTLNKLSV-----DKNLIE----------IFAKG----VDADAVVLMAARASRVENQDA 377
TLT N+++V D + E F K + + + RA Q+
Sbjct: 354 TLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQEN 413
Query: 378 I---------DAAIVGML-------ADPKEARANIQEVHFLPFNPTDKR--TALTYIDSE 419
+ DA+ +L E R +V +PFN T+K + D
Sbjct: 414 VPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPR 473
Query: 420 GKMH-RVSKGAPEQILN-----LVRNK-----SEIERRVHAIIDKFAERGLRSLAVAYQE 468
H V KGAPE+IL L+ K E++ + G R L +
Sbjct: 474 DPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLY 533
Query: 469 VPDGR--------KESSGGPWQ---FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD 517
+PD + + P F+GL+ + DPPR + + + + G+ V M+TGD
Sbjct: 534 LPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 593
Query: 518 QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVA---LPVDELIEKADG---------- 564
AK + +G+ + G E I A +PV ++ +
Sbjct: 594 HPITAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645
Query: 565 ------------------FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG
Sbjct: 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG 705
Query: 607 IAVADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 665
+A+ A +D ++ A+D++L + + I++ V R IF +K Y ++ I + F+
Sbjct: 706 VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 765
Query: 666 LLALIWKFDFP-PFMVLIIAILNDGTIM 692
+ + + P P + I ++ GT M
Sbjct: 766 IFII---ANIPLPLGTITILCIDLGTDM 790
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 197 bits (504), Expect = 3e-54
Identities = 149/596 (25%), Positives = 245/596 (41%), Gaps = 107/596 (17%)
Query: 73 LSWVMEAAAIMAIALANGGGKPPDWQD-FVGIVTLLLINSTISFIEENNAGNAAAAL--M 129
+++ A++A G + D ++T +L+ ++E G A+ AL +
Sbjct: 30 VAYGYSLVALLA-NQVLTGLHVHTFFDASAMLITFILLGR---WLEMLAKGRASDALSKL 85
Query: 130 ASLAPKS--KVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
A L P + + DG+ E +L PGDI+ V G+ IP D ++EG+ ++D+S +TG
Sbjct: 86 AKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTG 144
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQ---------- 237
ESLPV K GD V +G+ G + ATG T + LV Q
Sbjct: 145 ESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADK 204
Query: 238 --GHFQKVLTAIGNFCICS-IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIG---GIPI 291
G+F V+ AI + +G + + VL+I + +
Sbjct: 205 VAGYFVPVVIAIALITFVIWLILGADFVFALEVAVT------------VLIIACPCALGL 252
Query: 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE 351
A PTV+ A+ + + G + K A+E A +D + DKTGTLT K +V +
Sbjct: 253 ATPTVI----AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTV--TDVH 306
Query: 352 IFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRT 411
+F + + + L AA + E+ + AIV K + +V
Sbjct: 307 VFGESDRDELLALAAALEAGSEH--PLAKAIVSYA---KAKGITLSQV--------SDFK 353
Query: 412 ALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD 471
A+ I EG + I + N+ + + E + +
Sbjct: 354 AIPGIGVEGTVE------GHTIQ--LGNEKLLG---ENGLKTDGEVEEGGGTTSVLVAVN 402
Query: 472 GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531
G + G++ L D + ++ E I+ G+ M+TGD AK + LG
Sbjct: 403 G---------ELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG- 452
Query: 532 GTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTG 591
IE + A V P+ K ++K+LQ + + M G
Sbjct: 453 ---------------------------IE--NVRAEVLPDDKAALIKKLQEKGKVVAMVG 483
Query: 592 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
DG+NDAPAL +AD+GIA+ TD A A+D+VL L+ + +A+ SR +R+K
Sbjct: 484 DGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 3e-39
Identities = 156/581 (26%), Positives = 246/581 (42%), Gaps = 92/581 (15%)
Query: 71 NPLSWVMEAAAIMAIAL---ANGGGKPPDWQDFVGIVTLLLI------NSTISFIEENNA 121
NP+ +V+E +I+ L + G + F +T++L N + E
Sbjct: 32 NPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGK 91
Query: 122 GNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
A + +++LR DG A L GDI+ V+ G+IIP+D ++EG +
Sbjct: 92 AQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SV 150
Query: 181 DQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQ 236
D+SA+TGES PV + G SV G+ ++ + A TF + LV + Q
Sbjct: 151 DESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQ 210
Query: 237 QGHFQKVLTAIGNFCICSIAVGMIVEIIV--MYPIQHRKYRPGID--NLLVLLIGGIPIA 292
+ + LT I + +I + V +YP L+ LL+ IP
Sbjct: 211 KTPNEIALT------ILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTT 264
Query: 293 MPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLSVDKNLIE 351
+ +LS G R++ I A+E +D L DKTGT+TL N+ + +
Sbjct: 265 IGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF---- 320
Query: 352 IFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPK--EARANIQEVH--FLPFNPT 407
I GV + + A AS + ++ +IV LA E R + + H F+PF
Sbjct: 321 IPVPGVSEEELADAAQLAS-LADETPEGRSIV-ELAKKLGIELREDDLQSHAEFVPFT-- 376
Query: 408 DKRTALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIERRVHAIIDKFAERGLRSLAVAY 466
+T ++ +D G + KGA + I VR I + A +D+ + G L V
Sbjct: 377 -AQTRMSGVDLPGG-REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVV-- 432
Query: 467 QEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIA 522
V +GR +G++ L D + E +G+ MITGD AIA
Sbjct: 433 --VENGR---------ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481
Query: 523 KETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQA 582
E G VD+ I +A PE K ++++ QA
Sbjct: 482 AEAG----------------------------VDDFIAEAT------PEDKLALIRQEQA 507
Query: 583 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 508 EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 5e-39
Identities = 159/698 (22%), Positives = 261/698 (37%), Gaps = 172/698 (24%)
Query: 138 VLRDGKWMEEDAAILVPGDIISVKL--GDIIPADARLLEGDPLKIDQSALTGESLPVTK- 194
V+R+GKW+ + LVPGDI+S+ +P D+ LL G + +++S LTGES+PV K
Sbjct: 233 VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKF 291
Query: 195 -----GPGDSV------------YSG-------STCKQGEIEAVVIATGVHTFFGKAAH- 229
G D + G A+V+ TG T G+
Sbjct: 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRS 351
Query: 230 -----LVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVL 284
+ F+ +L F +G I II + + + +L ++
Sbjct: 352 ILYPKPRVFKFYKDSFKFIL-----FLAVLALIGFIYTIIELIKDGRPLGKIILRSLDII 406
Query: 285 LIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 344
I +P A+P LS+ + RL +G I +DV C DKTGTLT + L
Sbjct: 407 TIV-VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLD 465
Query: 345 V--------DKNLIEIF---AKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPK--- 390
+ ++ ++I + + +A S + ++ +VG D K
Sbjct: 466 LRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTK----LEGKLVGDPLDKKMFE 521
Query: 391 ------EARANIQE-------------------VHFLPFNPTDKRTA-LTYIDSEGKMHR 424
E E + F+ +R + + + E
Sbjct: 522 ATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDA 581
Query: 425 VSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVP--------DGRKES 476
KGAPE I +L + + ++ + G R LA+AY+E+P D +++
Sbjct: 582 FVKGAPETIQSLC-SPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDA 640
Query: 477 SGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETG-----R 527
F+G + +P + D+ E I+ + MITGD +A+E G
Sbjct: 641 VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSN 700
Query: 528 RLGMGTNMYPSSA------------------------LLGQNKDESIVALP--------- 554
L + P S LGQ+ E ++A
Sbjct: 701 TLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKA 760
Query: 555 -----------VDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603
+ L+ FA + P+ K +V+ LQ + GM GDG ND ALK+A
Sbjct: 761 FAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQA 820
Query: 604 DIGIAV--ADATDAARSASDIVLTEPGLSVII---SAVLTSRAIFQRMKNYT-IYAVSIT 657
D+GI++ A+A+ AA S + +VI A++TS +F+ M Y+ I S++
Sbjct: 821 DVGISLSEAEASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVS 880
Query: 658 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTIS 695
I + LI + L DG +TI
Sbjct: 881 I--------------------LYLIGSNLGDGQFLTID 898
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 6e-33
Identities = 159/612 (25%), Positives = 240/612 (39%), Gaps = 152/612 (24%)
Query: 69 MW-NPLSWVMEAAAIM--AIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAA 125
NP+ +V+E +I+ + +A + F +TL L T+ F N A
Sbjct: 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLW-FTVLF------ANFA 82
Query: 126 AAL--------MASL-----APKSKVLRDGKWMEE-DAAILVPGDIISVKLGDIIPADAR 171
AL SL ++ LR+ EE A L GDI+ V+ G+IIPAD
Sbjct: 83 EALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGE 142
Query: 172 LLEGDPLKIDQSALTGESLPVTKGPGD---SVYSGSTCKQGEIEAVVIATGVHTFFGKAA 228
++EG +D+SA+TGES PV + G SV G+ I + A +F +
Sbjct: 143 VIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMI 201
Query: 229 HLVDSTNQQ--------GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRP-GID 279
LV+ +Q LT I ++ + + P I
Sbjct: 202 ALVEGAKRQKTPNEIALTILLAGLTII-----------FLLVVATLPPFAAYSGGALSIT 250
Query: 280 NLLVLLIGGIPIAMPTVLSVTMAIG---SHRLSLQGAITKRMTAIEEMAGMDVLCSDKTG 336
L+ LL+ IP + +LS AIG R+ I A+E +D L DKTG
Sbjct: 251 VLVALLVCLIPTTIGGLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTG 307
Query: 337 TLTL-NKLSVDKNLIEIF--AKGVDADAVVLMAARASRVENQDAIDAAIVGMLADP---- 389
T+TL N+ + + F GV ++ DAA + LAD
Sbjct: 308 TITLGNRQASE------FLPVPGVTE---------------EELADAAQLSSLADETPEG 346
Query: 390 -------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNL 436
+E F+PF+ +T ++ +D +G + KGA + I
Sbjct: 347 RSIVVLAKQRFNLRERDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRRY 401
Query: 437 VR-NKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495
V N + A +D+ A +G L VA D R +G++ L D +
Sbjct: 402 VESNGGHFPAELDAAVDEVARKGGTPLVVA----EDNR---------VLGVIYLKDIVKP 448
Query: 496 DSAETIRRALNLGVNVKMITGD-QL---AIAKETGRRLGMGTNMYPSSALLGQNKDESIV 551
E +G+ MITGD L AIA E G
Sbjct: 449 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG------------------------- 483
Query: 552 ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611
VD+ + +A PE K ++++ QA + MTGDG NDAPAL +AD+G+A+
Sbjct: 484 ---VDDFLAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS 534
Query: 612 ATDAARSASDIV 623
T AA+ A ++V
Sbjct: 535 GTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 2e-32
Identities = 148/577 (25%), Positives = 241/577 (41%), Gaps = 81/577 (14%)
Query: 69 MWNPLSWVMEAAAIM----AIALANGGGKPPDWQDFVGIVTLLLINSTI--SFIEENNAG 122
NP+ +++ +++ IA A+ G + F I+T +L + + +F E G
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 123 NAAAALMASLAPKSKVL-----RDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP 177
A + K DG + A L GDI+ V+ GD+IP D ++EG
Sbjct: 90 RGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA 149
Query: 178 LKIDQSALTGESLPVTKGPGD---SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234
+D+SA+TGES PV K G SV G+ + A TF + LV+
Sbjct: 150 -SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGA 208
Query: 235 NQQGHFQKV-LTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRP-GIDNLLVLLIGGIPIA 292
++ ++ LT + + ++ + ++ ++P + L+ LL+ IP
Sbjct: 209 QRRKTPNEIALTIL----LIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTT 264
Query: 293 MPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLSVDKNLIE 351
+ +LS G R+ I A+E +D L DKTGT+TL N+L+ +
Sbjct: 265 IGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF---- 320
Query: 352 IFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRT 411
I A+GVD + A AS + D + + +LA R + + F +T
Sbjct: 321 IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQT 378
Query: 412 ALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIERRVHAIIDKFAERGLRSLAVAYQEVP 470
++ I+ + + KGA + I V N I + +D+ A +G L V
Sbjct: 379 RMSGINLDNG-RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVV----CE 433
Query: 471 DGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETG 526
D R G++ L D + E + +G+ MITGD AIA E G
Sbjct: 434 DNR---------IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484
Query: 527 RRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHI 586
VD+ I +A PE K ++++ QA +
Sbjct: 485 ----------------------------VDDFIAEAT------PEDKIALIRQEQAEGKL 510
Query: 587 CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 511 VAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 8e-31
Identities = 101/362 (27%), Positives = 158/362 (43%), Gaps = 64/362 (17%)
Query: 35 EGLSTEAAEERLTIFGYNKLEEKQESKILK-FLGFMWNPLSWVMEAAAIMAIALANGGGK 93
EGL+ + A+ RL G N+LE L + N + V+ AA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 94 PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILV 153
DW + I ++ +N I FI+E A +L +P + V+R+GK D+ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 154 PGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP------------GDSV- 200
PGDI +K GD IPAD RL+E D++ LTGESLPV K GD +
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 201 --YSGSTCKQGEIEAVVIATGVHTFFGKAA------------------------------ 228
+S S +G + + IAT +++ G A
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 229 ------HLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQ-HRKYRPGIDNL 281
N + L+ + C + +I IIVM + I
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAI-YA 313
Query: 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN 341
+ L I IP ++ VLS+TMA+G+ +S + I +++ A+E + ++ +CSDKTGT+T
Sbjct: 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQG 373
Query: 342 KL 343
K+
Sbjct: 374 KM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 1e-30
Identities = 142/528 (26%), Positives = 219/528 (41%), Gaps = 91/528 (17%)
Query: 127 ALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALT 186
ALMA + + LRDG+ E A L PGD+I V G +PAD +LL D+SALT
Sbjct: 236 ALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALT 294
Query: 187 GESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQ--------G 238
GES+PV + G+ V +G+T + V++ + + HL++ ++
Sbjct: 295 GESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFID 354
Query: 239 HFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLS 298
F ++ T + ++ V ++ ++ P Q YR L +LLI G P A+ V+S
Sbjct: 355 RFSRIYTPA--IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--VIS 405
Query: 299 VTMAIGS--HRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF-AK 355
AI S + +GA+ K A+E++ + + DKTGTLT K V +I A
Sbjct: 406 TPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQV----TDIHPAT 461
Query: 356 GVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTY 415
G+ ++ +AA A++ LA A ++ L + + AL
Sbjct: 462 GISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRALAG 509
Query: 416 IDSEGKM--HRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR 473
EG++ RV AP ++ + I++ G + V +
Sbjct: 510 SGIEGQVNGERVLICAPGKL-------PPLADAFAGQINELESAGKTVVLVLRND----- 557
Query: 474 KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533
+GL+ L D R D+ + I LG+ M+TGD A LG+
Sbjct: 558 --------DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI-- 607
Query: 534 NMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDG 593
D AG+ PE K + V L + M GDG
Sbjct: 608 -----------------------------DFRAGLLPEDKVKAVTELNQHAPL-AMVGDG 637
Query: 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 641
+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 638 INDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 5e-30
Identities = 116/443 (26%), Positives = 191/443 (43%), Gaps = 71/443 (16%)
Query: 350 IEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDK 409
I +FAK D L N++ + + K A + + PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSL---SQHNEKPGSAQFEFIAEFPFDSEIK 538
Query: 410 RTALTYIDSEGKMHRV-SKGAPEQIL---------NLVRNKSEIERRVHAII---DKFAE 456
R A Y D+ G+ + + +KGA E+I+ + V+ + II + A
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA 598
Query: 457 RGLRSLAVAYQEV---------------PDGRKESSGGPWQFIGLMPLFDPPRHDSAETI 501
GLR LA A + ES +F+GL+ ++DPPR++SA +
Sbjct: 599 EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNESAGAV 655
Query: 502 RRALNLGVNVKMITGDQLAIAKETGRRLG-MGTNMYPSS-------ALLGQN----KDES 549
+ G+NV M+TGD AK + +G + N + G DE
Sbjct: 656 EKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE 715
Query: 550 IVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609
+ L L+ A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 716 VDDLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 610 A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA----VSITIRIVLGF 664
+ +D A+ ASDIVL++ + I++A+ R +F + + ++ V+ I +++G
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGL 830
Query: 665 MLLALIWKFDFP--PFMVL-IIAILNDGTIMTISKDRVKPS----PLPDS------WKL- 710
K FP P +L I I + M + ++ P D+ +L
Sbjct: 831 AFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELI 890
Query: 711 AEIFTTGVILGGY-LAMMTVIFF 732
++F G LGG LA T I +
Sbjct: 891 IDMFAYGFFLGGSCLASFTGILY 913
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 7e-30
Identities = 131/564 (23%), Positives = 246/564 (43%), Gaps = 67/564 (11%)
Query: 100 FVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDII 158
+ ++TL+ N + + E A A K++ ++ DG + DA+ L G I+
Sbjct: 70 IILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIV 129
Query: 159 SVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEAVV 215
V G+ IP D ++++G +D+SA+TGES PV K G D+V G++ +E +
Sbjct: 130 RVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEI 188
Query: 216 IATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNFCIC-SIAVGMIVEIIVMYPI-QHRK 273
+ H+F K LV+ + +K I F + ++ + +V I+ MYP+ +
Sbjct: 189 TSEPGHSFLDKMIGLVEGATR----KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLN 244
Query: 274 YRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSD 333
+ I L+ L + IP + +LS G R++ + K ++E ++VL D
Sbjct: 245 FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILD 304
Query: 334 KTGTLTL-NKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEA 392
KTGT+T N+++ I + + + ++ AA S + + +IV LA +
Sbjct: 305 KTGTITYGNRMADA--FIPVKSSSFER---LVKAAYESSIADDTPEGRSIV-KLAYKQHI 358
Query: 393 RANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVHAII 451
+ ++PF + + + + E V KGAP ++ V+ I + A++
Sbjct: 359 DLPQEVGEYIPFTAETRMSGVKFTTRE-----VYKGAPNSMVKRVKEAGGHIPVDLDALV 413
Query: 452 DKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNV 511
+++G L V +G++ L D + E R +G+
Sbjct: 414 KGVSKKGGTPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFRELREMGIET 460
Query: 512 KMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571
M TGD A + G VD + + PE
Sbjct: 461 VMCTGDNELTAATIAKEAG------------------------VDRFVAECK------PE 490
Query: 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631
K +++ QA+ HI MTGDG NDAPAL +A++G+A+ T +A+ A++++ + +
Sbjct: 491 DKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTK 550
Query: 632 IISAVLTSRAIFQRMKNYTIYAVS 655
++ VL + + + T ++++
Sbjct: 551 LMEVVLIGKQLLMTRGSLTTFSIA 574
|
Length = 673 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 9e-26
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 11/249 (4%)
Query: 104 VTLLLINSTISFIEENNAGNAAAALMA--SLAPKSKVLRDGKWMEE-DAAILVPGDIISV 160
LLL+ S +EE +G A AL A LAP + + G +EE L GD++ V
Sbjct: 22 ALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVV 81
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGV 220
K G+ +P D +L G +D+SALTGES+PV K PGD V++G+ G + VV
Sbjct: 82 KPGERVPVDGVVLSGTST-VDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPA 140
Query: 221 HTFFGKAAHLV-DSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGID 279
+ K +LV ++ +++ Q+ + + + + +V ++ ++ +
Sbjct: 141 DSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVY 198
Query: 280 NLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGT 337
LVLL+ P A+ V+S A + G + K A+E +A + + DKTGT
Sbjct: 199 RALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGT 256
Query: 338 LTLNKLSVD 346
LT + V
Sbjct: 257 LTTGRPKVV 265
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 99.3 bits (248), Expect = 1e-21
Identities = 64/193 (33%), Positives = 93/193 (48%), Gaps = 33/193 (17%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
++G + L D PR D+AE I LG+ V M+TGD+ A+A+ R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
+DE+ A + PE K EIVK L+ + M GDG+NDAPAL
Sbjct: 402 --------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPAL 441
Query: 601 KKADIGIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITI 658
AD+GIA+ A +D A +D+VL LS + A+ +R + +K N I I +
Sbjct: 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILL 501
Query: 659 RIVLGFMLLALIW 671
I+L + +W
Sbjct: 502 LILLALFGVLPLW 514
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 1e-18
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 38/170 (22%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYP 537
+ L+ + DP R DS ++R G + M+TGD AIAKE G
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG----------- 688
Query: 538 SSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDA 597
+DE+I AGV P+ K E +KRLQ++ M GDG+NDA
Sbjct: 689 -----------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725
Query: 598 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
PAL +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 726 PALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 74.5 bits (184), Expect = 2e-16
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 15 AVDLENVPMEEVFETLRCNKE-GLSTEAAEERLTIFGYNKLEE-KQESKILKFLGFMWNP 72
+D + +EEV E L+ + E GLS+E A RL +G N+L K+ S +L+FL NP
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 73 LSWVMEAAAIMAIAL 87
L +++ AAA+++ L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 62.9 bits (154), Expect = 2e-12
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 20 NVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWVM 77
+ +EEV L + ++GL+ AEERL +G N+L E+K +S FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 78 EAAAIMA 84
AAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 6e-09
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 154 PGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEA 213
PG ++ + GD +P D + +G+ +D++ LTGE +P KG GDSV++G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 214 VVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNFC--ICSIAVGMIVEIIVM----- 266
A G HT + +V +Q K IG I ++ V ++V I ++
Sbjct: 402 RASAVGSHTTLSRIIRMV----RQAQSSK--PEIGQLADKISAVFVPVVVVIALVSAAIW 455
Query: 267 YPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSLQGAITKRMTAIE 322
Y P I LV+ + IA P L + M+I G R + G + + A++
Sbjct: 456 YFFGP---APQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQ 512
Query: 323 EMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
+ +D L DKTGTLT K V ++ F +A A+ L AA
Sbjct: 513 RASTLDTLVFDKTGTLTEGKPQVVA--VKTFNGVDEAQALRLAAA 555
|
Length = 834 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 6e-08
Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 484 IGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 543
+GL+ L DP + E ++ G+ + ++TGD A R LG+ + +
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLYG- 144
Query: 544 QNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603
V P ++ E A ++ L + M GDGVND PA K A
Sbjct: 145 ----LVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAA 186
Query: 604 D 604
Sbjct: 187 G 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 4e-07
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASD 621
FAG PE K +I++ L+ R M G+G ND AL++AD+GI + +D
Sbjct: 74 FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTAD 133
Query: 622 IVLTEPGLSVIISA 635
+VL E + +
Sbjct: 134 VVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 6e-05
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 376 DAIDAAIVG----MLADPKEARANIQEVHFLPFNPTDKR-TALTYIDSEGKMHRVSKGAP 430
D ++A++ + D +E RA V +PFN KR + + ++ + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 431 EQILNL 436
E+IL
Sbjct: 82 ERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.004
Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 38/166 (22%)
Query: 400 HFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAI-IDKFAERG 458
+ L FN KR ++ + +G++ + KGA I + + ++ +A G
Sbjct: 513 NVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEG 572
Query: 459 LRSLAVAYQEVPDGRKESSGGPWQ-----------------------------FIGLMPL 489
LR+L +AY+E+ + E W +G +
Sbjct: 573 LRTLCIAYRELSEEEYEE----WNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAI 628
Query: 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM 535
D + ETI G+ + ++TGD++ ET +G +
Sbjct: 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKV----ETAINIGYSCRL 670
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 875 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.64 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.43 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.31 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.25 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.1 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.02 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.92 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.89 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.8 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.77 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.76 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.75 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.71 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.69 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.69 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.66 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.62 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.59 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.58 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.58 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.51 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.48 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.47 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.45 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.45 | |
| PLN02887 | 580 | hydrolase family protein | 98.42 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.35 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.34 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.31 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.3 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.27 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.24 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.21 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.18 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.1 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.1 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.05 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.04 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.04 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.93 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.86 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.81 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.7 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.56 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.53 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.44 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.43 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.43 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.23 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.16 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.14 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.14 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.11 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.09 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.08 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.08 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.9 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.88 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.86 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.79 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.75 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.71 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.71 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.69 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.65 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.58 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.54 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.47 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.46 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.43 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.36 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.36 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.33 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.28 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.14 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.06 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.04 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.97 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.9 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.85 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.84 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.79 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.76 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.68 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.65 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.62 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.62 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.43 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.3 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.21 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.2 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.2 | |
| PLN02940 | 382 | riboflavin kinase | 95.08 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.98 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 94.87 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.84 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.75 | |
| PLN02580 | 384 | trehalose-phosphatase | 94.5 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.27 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.2 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.01 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.82 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.75 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.72 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.29 | |
| PLN02811 | 220 | hydrolase | 93.28 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.97 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.83 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.25 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.2 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 92.15 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 91.53 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.5 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 91.42 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 91.04 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 90.85 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.45 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 90.18 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 89.21 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 89.16 | |
| PLN03017 | 366 | trehalose-phosphatase | 88.86 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 88.22 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 87.9 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 87.64 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 86.48 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 85.43 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 83.38 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 83.06 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 82.12 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-147 Score=1236.49 Aligned_cols=830 Identities=28% Similarity=0.402 Sum_probs=677.4
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCC
Q 002832 16 VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGK 93 (875)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~ 93 (875)
.+.|..+.+|+++.|.++ ++|||++|+.+|+++||+|+++... .+.|+++++||.|++..+|+++|++|+++.
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~----- 76 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA----- 76 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-----
Confidence 356778999999999999 6799999999999999999998654 789999999999999999999999999995
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEE
Q 002832 94 PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLL 173 (875)
Q Consensus 94 ~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll 173 (875)
.|.++..|.+++++|+.++++||||++|++++|+++.|+.++|+|+|+.+.++++||||||||.|+-||+||||.||+
T Consensus 77 --~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~ 154 (972)
T KOG0202|consen 77 --DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLI 154 (972)
T ss_pred --hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEE
Confidence 778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCeeeeccccCCCCeeeecCC--------------CCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCC
Q 002832 174 EGDPLKIDQSALTGESLPVTKGP--------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQG 238 (875)
Q Consensus 174 ~g~~l~VdeS~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~ 238 (875)
+..++.+|||.|||||.|+.|+. .|++|+||.|..|+++|+|+.||.+|++|++...++.. ++++
T Consensus 155 e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kT 234 (972)
T KOG0202|consen 155 EAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKT 234 (972)
T ss_pred eeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCC
Confidence 99999999999999999999953 25799999999999999999999999999999999887 6699
Q ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHH-Hhhhc---c-c---CCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 002832 239 HFQKVLTAIGNFCICSIA-VGMIVEII-VMYPI---Q-H---RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (875)
Q Consensus 239 ~~~~~~~~i~~~~~~~~~-~~~~~~~~-~~~~~---~-~---~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~ 309 (875)
|+|+.++.+++.+.-.+. +.+.+..+ +.++. . + ..+.+.+...+++.+++||+|||+++++++++|.+||+
T Consensus 235 PLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMa 314 (972)
T KOG0202|consen 235 PLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMA 314 (972)
T ss_pred cHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHH
Confidence 999999999887642222 22222111 11111 1 2 34455667778999999999999999999999999999
Q ss_pred hcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEecc-----------CCC------------------Ch-
Q 002832 310 LQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA-----------KGV------------------DA- 359 (875)
Q Consensus 310 ~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~-----------~~~------------------~~- 359 (875)
|++++||+++++|+||.+++||+|||||||+|+|++.+.++.... .++ ..
T Consensus 315 kknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~ 394 (972)
T KOG0202|consen 315 KKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDND 394 (972)
T ss_pred hhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccH
Confidence 999999999999999999999999999999999999987752110 000 01
Q ss_pred --HHHHHHHHHhccc------c-----ccChHHHHHHHhcC-----ChH---H-----------HhhcccEEEEecCCCC
Q 002832 360 --DAVVLMAARASRV------E-----NQDAIDAAIVGMLA-----DPK---E-----------ARANIQEVHFLPFNPT 407 (875)
Q Consensus 360 --~~~l~~~~~~~~~------~-----~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~l~~~pf~~~ 407 (875)
.+++.+++.|+.. . .+.|.|.|+...+. +.. . ....++.+.++||+++
T Consensus 395 ~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssd 474 (972)
T KOG0202|consen 395 LLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSD 474 (972)
T ss_pred HHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccc
Confidence 1234444444421 1 45788888865431 100 0 1223456699999999
Q ss_pred CceEEEEEEcCCCe--EEEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCC-
Q 002832 408 DKRTALTYIDSEGK--MHRVSKGAPEQILNLVRN------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG- 472 (875)
Q Consensus 408 ~k~~sv~~~~~~g~--~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~- 472 (875)
+|+|++.+.+..++ +..|+|||+|.++++|+. ++..++.+.+...+++++|+|||++|+++.+..
T Consensus 475 rK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~ 554 (972)
T KOG0202|consen 475 RKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV 554 (972)
T ss_pred cceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC
Confidence 99999999866554 788999999999999953 245688899999999999999999999976631
Q ss_pred ----------CcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCcc
Q 002832 473 ----------RKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSA 540 (875)
Q Consensus 473 ----------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~ 540 (875)
.+...|.||+|+|++++.||||+|++++|+.|+++||+|+||||||.+||.+||+++|+..+.. ....
T Consensus 555 ~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~ 634 (972)
T KOG0202|consen 555 PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMA 634 (972)
T ss_pred hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccc
Confidence 1345789999999999999999999999999999999999999999999999999999975433 4578
Q ss_pred cccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhc
Q 002832 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSA 619 (875)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~a 619 (875)
++|++.|+ ++++++++...++.+|||++|+||.+||++||++|++|||||||+||+||||.|||||||| +|||+||||
T Consensus 635 ~TG~efD~-ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeA 713 (972)
T KOG0202|consen 635 LTGSEFDD-LSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEA 713 (972)
T ss_pred cchhhhhc-CCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhh
Confidence 99999985 9999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred cCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCcCHHHHHHHHHhhccc-cccccCC
Q 002832 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-LALIWKFDFPPFMVLIIAILNDGT-IMTISKD 697 (875)
Q Consensus 620 ADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~ 697 (875)
||+||.||||++|+.||+|||.+|+|||+|+.|++++|++.+..+++ ..+.++.|++|+|+||+|+++|++ +++|+++
T Consensus 714 sDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~e 793 (972)
T KOG0202|consen 714 SDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFE 793 (972)
T ss_pred hhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCC
Confidence 99999999999999999999999999999999999999996665544 556778899999999999999998 5999999
Q ss_pred CCC------CCCCCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCc------cccc--ccCCccchhhHH-hH
Q 002832 698 RVK------PSPLPDSWK-LAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPR------TFGV--SSLHEKDIDDWK-KL 761 (875)
Q Consensus 698 ~~~------~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~-~~ 761 (875)
+++ ||+.++... ...++.+++.+|.++...++..|++-+....... +|.. .+..+.+-..+. ..
T Consensus 794 p~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~ 873 (972)
T KOG0202|consen 794 PVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMC 873 (972)
T ss_pred CCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccc
Confidence 863 334333333 4567888999999999888776654443210000 0000 000000000000 01
Q ss_pred HHHHHHHHHHHHHH-HHHHHhcCCCccccC---chHHHHHHHHHHHHHHHHHHHhhc--ccccccCchhhHHHHHHHHHH
Q 002832 762 ASAIYLQVSTISQA-LIFVTRARSWSFVDR---PGLLLVLAFAVAQLIATLIAVYAN--WSFAAIEGVGWGWAGVVWLYN 835 (875)
Q Consensus 762 ~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 835 (875)
..++.++..++..+ +.+++|++..+.+.. .|.|+..++.+++.. .++.+|.+ ...|+..+++|.-|++++.++
T Consensus 874 ~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~-~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s 952 (972)
T KOG0202|consen 874 PLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVL-HFLVLYVPPLQRIFQTEPLSLAEWLLVLAIS 952 (972)
T ss_pred cceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHh-hheEEEechhhhhheecCCcHHHHHHHHHHh
Confidence 23555555555554 568899987775543 367777776655443 33344543 234568888888889999999
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 002832 836 LIFYIPLDFIKFFIRYALS 854 (875)
Q Consensus 836 ~~~~~~~~~~k~~~r~~~~ 854 (875)
+.+++++|++|++.|+++.
T Consensus 953 ~~V~i~dEilK~~~R~~~~ 971 (972)
T KOG0202|consen 953 SPVIIVDEILKFIARNYFK 971 (972)
T ss_pred hhhhhHHHHHHHHHHhccC
Confidence 9999999999999998864
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-145 Score=1180.32 Aligned_cols=855 Identities=85% Similarity=1.298 Sum_probs=821.4
Q ss_pred HHHhhhhccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002832 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIAL 87 (875)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 87 (875)
.++.++|..+....+.||++++|..+..|||++|+++|+++||+|++++++.+.+++|+.+||||+.|++..+|++.+.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 67788888888999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccc
Q 002832 88 ANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIP 167 (875)
Q Consensus 88 ~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vP 167 (875)
..+++.+.+|.++++|++++++|+.++|+||+++.+..++|++.+.++++|+|||+|.++++++||||||+.++.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhcccCCCCcHHHHHHHH
Q 002832 168 ADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247 (875)
Q Consensus 168 aD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i 247 (875)
||+||++|+-|+||+|+|||||.|+.|++||.+|+||+|.+|++.++|++||.+|..||.++++....+..+||+.++.+
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCc
Q 002832 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGM 327 (875)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v 327 (875)
+.++++.+++.+++.+.+.|+.+.+.+...+.+.+++++..+|.++|.+++++++.|+.||+++|+++|+++++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999888888888888888888888888999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCC
Q 002832 328 DVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPT 407 (875)
Q Consensus 328 ~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~ 407 (875)
|++|+|||||||.|+++|.+..++.+.++.++++++..|+.+++.++.|.+|.|+++.+.+|.+.+.+++.++++||||.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999777778889999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEe
Q 002832 408 DKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487 (875)
Q Consensus 408 ~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i 487 (875)
.||.+..+.+++|+.+.++|||||.|++.|..+.+++++.++.+++|+++|+|.+++|++..++..++.....+.|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988888888999999999
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
-+-||||.+..++|++....|++|.|+|||....+++.++++|+.+|.+++..+.|.+.++.+...+.++++++.+-||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999998989999999999999999999
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHH
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~ 647 (875)
+.|+||+++|+.||++||.|+|+|||+||+||||.||+|||+..++|+|+.+||+||+++.++.|+.++..+|.+|+|++
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHhhccccccccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 002832 648 NYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727 (875)
Q Consensus 648 ~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 727 (875)
.|..|+++..+.+++.++...+.|.+.|+|.+.+++.+++|.+.|+++.|+++|++.|..|.+..+|...+++|.++++.
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999988888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHHHHHHHHHHH
Q 002832 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIAT 807 (875)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~ 807 (875)
+..+||......+++..||.....++.. ...+.+|+++++..|+++|.+|++.|+|..+|+++++.+++..+++++
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~----~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliat 803 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEH----ELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIAT 803 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHH----HHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHH
Confidence 9999999998889988888877776665 566788999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHhhhh
Q 002832 808 LIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRV 866 (875)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~ 866 (875)
++.+|.+|.+.....+.|.|...+|.+++..+.+.++.|+..|......+|+..++.|-
T Consensus 804 liavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~ 862 (942)
T KOG0205|consen 804 LIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKT 862 (942)
T ss_pred HHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcc
Confidence 99999999998899999999999999999999999999999998888888887666554
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-135 Score=1238.96 Aligned_cols=810 Identities=27% Similarity=0.422 Sum_probs=673.4
Q ss_pred hhccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC
Q 002832 13 KEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (875)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~ 91 (875)
+.....+..+.++++++++++.+|||++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++
T Consensus 44 ~~~~~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--- 120 (902)
T PRK10517 44 ARCLKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--- 120 (902)
T ss_pred HHHHHHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc---
Confidence 34456788899999999999999999999999999999999998765 57789999999999999999999999874
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEEC------CeEEEEecCCcCCCcEEEEecCCc
Q 002832 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD------GKWMEEDAAILVPGDIISVKLGDI 165 (875)
Q Consensus 92 ~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiv~l~~G~~ 165 (875)
+|.++++|+++++++.+++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+
T Consensus 121 ----~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~ 196 (902)
T PRK10517 121 ----DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDM 196 (902)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence 8999999999999999999999999999999999999999999999 789999999999999999999999
Q ss_pred cccceEEEecCCeeeeccccCCCCeeeecCCCC-------------ceeecceeccCceeEEEEEecchhhhhhhhhhhc
Q 002832 166 IPADARLLEGDPLKIDQSALTGESLPVTKGPGD-------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 232 (875)
Q Consensus 166 vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 232 (875)
|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||++|++|||+++++
T Consensus 197 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~ 276 (902)
T PRK10517 197 IPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVS 276 (902)
T ss_pred EeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhh
Confidence 999999999998899999999999999998864 7999999999999999999999999999999998
Q ss_pred cc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhc
Q 002832 233 ST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQ 311 (875)
Q Consensus 233 ~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~ 311 (875)
++ .+++|+|+.+++++++++.+..+.+.+.+++ +.....+|.+++...+++++++|||+||++++++++.|+++|+|+
T Consensus 277 ~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i-~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~ 355 (902)
T PRK10517 277 EQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLI-NGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQ 355 (902)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhC
Confidence 76 6789999999999887644333322222222 222345677888889999999999999999999999999999999
Q ss_pred CCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccc--cccChHHHHHHHhcCCh
Q 002832 312 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV--ENQDAIDAAIVGMLADP 389 (875)
Q Consensus 312 ~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~ 389 (875)
|++||+++++|+||++|++|||||||||+|+|+|.+.. . ..+.+.++++..++.++.. ..+||+|.|++.+....
T Consensus 356 ~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~--~-~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~ 432 (902)
T PRK10517 356 KVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT--D-ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEE 432 (902)
T ss_pred CcEEecchhhhhccCCCEEEecCCCccccceEEEEEEe--c-CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999998752 1 1244556677776665443 24789999998876432
Q ss_pred --HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHhc
Q 002832 390 --KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKFAER 457 (875)
Q Consensus 390 --~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~ 457 (875)
......++.++++|||+++|+|++++...++.+..++||+||.++++|+. +++.++++.+..++++++
T Consensus 433 ~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~ 512 (902)
T PRK10517 433 SARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQ 512 (902)
T ss_pred chhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhc
Confidence 22345688899999999999999988766777789999999999999964 234456778888999999
Q ss_pred CCeEEEEEEEecCCCCc---CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCC
Q 002832 458 GLRSLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN 534 (875)
Q Consensus 458 G~rvl~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~ 534 (875)
|+||+++||++++..+. ...|+|++|+|+++|+||||||++++|++||++||+|+|+||||+.||.++|+++||..
T Consensus 513 G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~- 591 (902)
T PRK10517 513 GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA- 591 (902)
T ss_pred CCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-
Confidence 99999999998754322 12477999999999999999999999999999999999999999999999999999953
Q ss_pred CCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccH
Q 002832 535 MYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD 614 (875)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd 614 (875)
..+++|.+++. ++++++++.+++++||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|
T Consensus 592 ---~~v~~G~el~~-l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtd 667 (902)
T PRK10517 592 ---GEVLIGSDIET-LSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVD 667 (902)
T ss_pred ---cCceeHHHHHh-CCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCH
Confidence 36788988874 88899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcCHHHHHHHHHhhcccccc
Q 002832 615 AARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVLIIAILNDGTIMT 693 (875)
Q Consensus 615 ~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~ 693 (875)
+||++||+||+||||++|++++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|+++++
T Consensus 668 vAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~a 747 (902)
T PRK10517 668 IAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVA 747 (902)
T ss_pred HHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999999998887777666666 699999999999999987899
Q ss_pred ccCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHH
Q 002832 694 ISKDRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVST 771 (875)
Q Consensus 694 l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (875)
+++|++++.. +|++|....+...+++.|++.++++++.|+++.+. ++.. . ... ....++.+|..++
T Consensus 748 l~~d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~-~--~~~---~~~~~~~~F~~~~ 815 (902)
T PRK10517 748 IPFDNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHAN-T--PET---QTLFQSGWFVVGL 815 (902)
T ss_pred hcCCCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccc-c--hhh---HhHHHHHHHHHHH
Confidence 9999988764 67778777788888889999888877777665421 1100 0 000 0112334477777
Q ss_pred HHHH-HHHHHhcCCCccccC-chHHHHHHHHHHHHHHHHHHHhhcccccccCchh--hHHHHHHHHHHHHHHHHHHHHHH
Q 002832 772 ISQA-LIFVTRARSWSFVDR-PGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WGWAGVVWLYNLIFYIPLDFIKF 847 (875)
Q Consensus 772 ~~~~-~~~~~r~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~ 847 (875)
++|+ .+|++|+++.+++.+ +.+..++..++.+++.+++|+.+..+++.+.+++ +..|++++.++.. ++.|+.|.
T Consensus 816 ~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~ 893 (902)
T PRK10517 816 LSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKG 893 (902)
T ss_pred HHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHH
Confidence 7775 679999987554444 4444444444444444444421112344566666 4444454444444 55677765
Q ss_pred H-HHHh
Q 002832 848 F-IRYA 852 (875)
Q Consensus 848 ~-~r~~ 852 (875)
+ .|+|
T Consensus 894 ~~~~~~ 899 (902)
T PRK10517 894 FYSRRY 899 (902)
T ss_pred HHHHhh
Confidence 4 4433
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-135 Score=1253.05 Aligned_cols=825 Identities=26% Similarity=0.375 Sum_probs=668.4
Q ss_pred hccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC
Q 002832 14 EAVDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (875)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~ 91 (875)
|-.+||..+.+|++++|+++ .+|||++||++|+++||+|+++.++ .+.|+.|+++|++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 45789999999999999998 5799999999999999999999866 678889999999999999999999999984
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceE
Q 002832 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADAR 171 (875)
Q Consensus 92 ~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ 171 (875)
+|.++++|++++++|+.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeeeccccCCCCeeeecCCC---------------CceeecceeccCceeEEEEEecchhhhhhhhhhhcccC-
Q 002832 172 LLEGDPLKIDQSALTGESLPVTKGPG---------------DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 235 (875)
Q Consensus 172 ll~g~~l~VdeS~LTGEs~pv~K~~~---------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~- 235 (875)
|+++++|.||||+|||||.||.|.+. |++|+||.|.+|+++++|++||++|++|||++++++..
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99999999999999999999999642 57899999999999999999999999999999885431
Q ss_pred -----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHH
Q 002832 236 -----------------------------------QQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDN 280 (875)
Q Consensus 236 -----------------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (875)
.++|+|+.++++++++..+.++..++.++..+ . ..+.+.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHH
Confidence 14899999999988754433222222222111 1 112455667
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEe---c---c
Q 002832 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI---F---A 354 (875)
Q Consensus 281 ~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~---~---~ 354 (875)
.++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+++... + .
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 789999999999999999999999999999999999999999999999999999999999999999876421 0 0
Q ss_pred --CCC---------------------------------------C---------hHHHHHHHHHhccc------------
Q 002832 355 --KGV---------------------------------------D---------ADAVVLMAARASRV------------ 372 (875)
Q Consensus 355 --~~~---------------------------------------~---------~~~~l~~~~~~~~~------------ 372 (875)
.++ + ...++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 01345555555421
Q ss_pred cccChHHHHHHHhcCCh----------HHH-------------------hhcccEEEEecCCCCCceEEEEEEcCCC-eE
Q 002832 373 ENQDAIDAAIVGMLADP----------KEA-------------------RANIQEVHFLPFNPTDKRTALTYIDSEG-KM 422 (875)
Q Consensus 373 ~~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~pf~~~~k~~sv~~~~~~g-~~ 422 (875)
..+||+|.|++.++... .+. +..++.++++||||++|||++++++.++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 12699999998764211 011 2346789999999999999999986544 47
Q ss_pred EEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCC------------cCCCC
Q 002832 423 HRVSKGAPEQILNLVRN------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR------------KESSG 478 (875)
Q Consensus 423 ~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~------------~~~~e 478 (875)
++|+|||||.|+++|+. +++.++++.+.+++|+++|+||+++|||.++..+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 88999999999999963 2345678888999999999999999999886431 13457
Q ss_pred CCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--------CCcccccccccccC
Q 002832 479 GPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--------PSSALLGQNKDESI 550 (875)
Q Consensus 479 ~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--------~~~~~~~~~~~~~~ 550 (875)
++|+|+|+++++||||||++++|++||++||+|+|+||||+.||.++|+++||..+.. ...+++|.+++. +
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-L 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh-c
Confidence 8999999999999999999999999999999999999999999999999999964311 235788888874 7
Q ss_pred CcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCCh
Q 002832 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 629 (875)
Q Consensus 551 ~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~ 629 (875)
++++++++++++.||||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|+||++||++|+||||
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 788899999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCcCHHHHHHHHHhhccc-cccccCCCCCC-
Q 002832 630 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIW------KFDFPPFMVLIIAILNDGT-IMTISKDRVKP- 701 (875)
Q Consensus 630 ~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~- 701 (875)
++|+.++++||++|+||+|++.|.+++|++.++.++++.++. ++|++|+|++|+|+++|.+ ++++++|++.+
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999999887766655542 3689999999999999976 69999987633
Q ss_pred -----CCCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccc---cCCccchhhHHhHHHHHHHHHHHH
Q 002832 702 -----SPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVS---SLHEKDIDDWKKLASAIYLQVSTI 772 (875)
Q Consensus 702 -----~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 772 (875)
|+.+. +...++++.+++++|+++++.+++.|++.++. +..+..+.. ....... .. ..+++++|.++++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~a~t~~f~~l~~ 948 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAGCN-DV-FKARSAAFATMTF 948 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccccccccc-ch-hhhHHHHHHHHHH
Confidence 22222 23334567778899999999888777654321 000000000 0000000 01 2356777888888
Q ss_pred HHH-HHHHHhcCCCcccc------------------CchHHHHHHHHHHHHHHHHHHHhhc-c--cccccCchhhHHHHH
Q 002832 773 SQA-LIFVTRARSWSFVD------------------RPGLLLVLAFAVAQLIATLIAVYAN-W--SFAAIEGVGWGWAGV 830 (875)
Q Consensus 773 ~~~-~~~~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 830 (875)
+|+ ++|++|+++.+.+. ..|.+++.++++.+++. ++.+|.+ . .+|.+.|++|.| ++
T Consensus 949 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~~~~~p~~~~~~f~~~~l~~~w-~~ 1026 (1053)
T TIGR01523 949 CALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSA-FPTIYIPVINDDVFKHKPIGAEW-GL 1026 (1053)
T ss_pred HHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHH-HHHHhhhhhhhhhhccCCcchHH-HH
Confidence 886 67899997655331 13566666555444333 2233322 2 256678888855 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Q 002832 831 VWLYNLIFYIPLDFIKFFIRYALS 854 (875)
Q Consensus 831 ~~~~~~~~~~~~~~~k~~~r~~~~ 854 (875)
++++++++++..|++|+++|++..
T Consensus 1027 ~~~~~~~~~~~~e~~K~~~r~~~~ 1050 (1053)
T TIGR01523 1027 AAAATIAFFFGAEIWKCGKRRLFK 1050 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc
Confidence 788899999999999999887643
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-135 Score=1236.73 Aligned_cols=816 Identities=26% Similarity=0.407 Sum_probs=672.7
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC---
Q 002832 16 VDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG--- 91 (875)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~--- 91 (875)
...|..+.+|++++|+++.+|||++|+++|+++||+|+++.++ +++|+.|+++|++|+.++|+++++++++++...
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4578899999999999998999999999999999999999766 567889999999999999999999999985321
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEEC------CeEEEEecCCcCCCcEEEEecCC
Q 002832 92 -GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD------GKWMEEDAAILVPGDIISVKLGD 164 (875)
Q Consensus 92 -~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiv~l~~G~ 164 (875)
+...+|.++++|+++++++..++++||+++++++++|+++.+++++|+|| |++++|+++||||||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 22357999999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred ccccceEEEecCCeeeeccccCCCCeeeecCC-----------------------CCceeecceeccCceeEEEEEecch
Q 002832 165 IIPADARLLEGDPLKIDQSALTGESLPVTKGP-----------------------GDSVYSGSTCKQGEIEAVVIATGVH 221 (875)
Q Consensus 165 ~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~-----------------------~~~v~~Gt~v~~G~~~~~V~~tG~~ 221 (875)
+|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|+++++|++||++
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999988999999999999999975 2689999999999999999999999
Q ss_pred hhhhhhhhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHH
Q 002832 222 TFFGKAAHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301 (875)
Q Consensus 222 T~~g~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~ 301 (875)
|++|||.+++++.+.++++|+.++++++++..+..+.+.+.+++ ......+|.+++...+++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~-~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLI-NGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 99999999998766678999999998876543322222221111 12234567788888999999999999999999999
Q ss_pred HHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccc--cccChHH
Q 002832 302 AIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV--ENQDAID 379 (875)
Q Consensus 302 ~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~ 379 (875)
+.|+++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+.+ . ..+.++++++.+++.++.. ..+||+|
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~--~-~~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL--D-VSGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE--c-CCCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 999999999999999999999999999999999999999999998754 1 1233455667666554332 2468999
Q ss_pred HHHHHhcCChH--HHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC----------ChHHHHHH
Q 002832 380 AAIVGMLADPK--EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRV 447 (875)
Q Consensus 380 ~ai~~~~~~~~--~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~ 447 (875)
.|++.+..+.. .....++.++++||++.+|+|++++++.+|+++.++|||||.++++|+. +++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 99998764321 1234678899999999999999998876788889999999999999963 23446678
Q ss_pred HHHHHHHHhcCCeEEEEEEEecCCCCc-----CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHH
Q 002832 448 HAIIDKFAERGLRSLAVAYQEVPDGRK-----ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA 522 (875)
Q Consensus 448 ~~~~~~~~~~G~rvl~~A~~~~~~~~~-----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA 522 (875)
.+..++++++|+|++++||++++..+. +..|+|++|+|+++|+||||||++++|++||++||+|+|+||||+.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 888899999999999999998765321 235789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhh
Q 002832 523 KETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602 (875)
Q Consensus 523 ~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~ 602 (875)
.++|+++||.. ..+++|.+++. ++++++++.+++++||||++|+||.++|+.||++|++|||||||+||+||||+
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999953 35788998885 88899999999999999999999999999999999999999999999999999
Q ss_pred CCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcCHHHHH
Q 002832 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVL 681 (875)
Q Consensus 603 AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l 681 (875)
||||||||+|||+||++||+||+||||++|+.++++||++|+||+|++.|.++.|+..++.+++..++.+ +|++|+|++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998776665555455 699999999
Q ss_pred HHHHhhccccccccCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHH
Q 002832 682 IIAILNDGTIMTISKDRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWK 759 (875)
Q Consensus 682 ~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (875)
|+|+++|++++++++|++++.. +|++|..+.+-..+.++|...++++++.|++..+.. . .+ . . ...
T Consensus 736 ~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~--~~------~-~-~~~ 803 (903)
T PRK15122 736 LQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFVF--A--AN------S-V-EMQ 803 (903)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--c--cC------c-H-hhh
Confidence 9999999878999999886553 555555544444555677777776666655432210 0 01 0 0 000
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHhcCCCccccCch-HHHHHHHHHHHHHHHHHHHhhcccccccCchhhHHHHHHHHHHHH
Q 002832 760 KLASAIYLQVSTISQA-LIFVTRARSWSFVDRPG-LLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLI 837 (875)
Q Consensus 760 ~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (875)
...++.+|..++++|+ ++|++|+++.+++.++. +..++..++.+++.+++|+.+.-.++.+.++++..|++++.+++.
T Consensus 804 ~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~ 883 (903)
T PRK15122 804 ALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLG 883 (903)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 1234556777777775 68999998755555443 333333333444444444311012456778888878888888888
Q ss_pred HHHHHHHHHHHHHHh
Q 002832 838 FYIPLDFIKFFIRYA 852 (875)
Q Consensus 838 ~~~~~~~~k~~~r~~ 852 (875)
++++.|+.|.+.++.
T Consensus 884 ~~~~~e~~k~~~~r~ 898 (903)
T PRK15122 884 YCLVAQGMKRFYIRR 898 (903)
T ss_pred HHHHHHHHHHHHhhh
Confidence 888889888554433
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-135 Score=1219.72 Aligned_cols=749 Identities=60% Similarity=0.930 Sum_probs=658.5
Q ss_pred CCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002832 36 GLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISF 115 (875)
Q Consensus 36 GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~ 115 (875)
|||++|+++|+++||+|++++++++.|+.|+++|++|+.|+|+++++++++++ +|.+++++++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999877888999999999999999999999999984 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecC
Q 002832 116 IEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195 (875)
Q Consensus 116 ~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~ 195 (875)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.+++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999997899999999999999999
Q ss_pred CCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCc
Q 002832 196 PGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKY 274 (875)
Q Consensus 196 ~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (875)
+||.+|+||.|.+|+++++|++||++|++|||.++++++ .+++|+|+.+++++++++.+.++.+++.+++++.....+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999999999999999999999999999999999999887 4678999999999988755443333333333333245678
Q ss_pred hhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEecc
Q 002832 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA 354 (875)
Q Consensus 275 ~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~ 354 (875)
.+++...+++++++|||+||++++++++.|++||+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++ ...
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~--~~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL--PFF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE--ecC
Confidence 888899999999999999999999999999999999999999999999999999999999999999999998865 222
Q ss_pred CCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEEEcC-CCeEEEEEcCcHHHH
Q 002832 355 KGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQI 433 (875)
Q Consensus 355 ~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~-~g~~~~~~KGa~e~i 433 (875)
.+.++++++.+++.++...++||+|.|++++..+....+..++.++.+||++.+|+|++.+.+. +|+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 2356777888887776666789999999987765444456688899999999999999988765 377888999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEE
Q 002832 434 LNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKM 513 (875)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~m 513 (875)
+++|++..+.++++++.+++++.+|+|++++||++ .|++|+|+|+++|+||||||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998777777888999999999999999999983 3678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCC-cccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcC
Q 002832 514 ITGDQLAIAKETGRRLGMGTNMYPS-SALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (875)
Q Consensus 514 iTGD~~~tA~~ia~~lGi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GD 592 (875)
+||||+.||.++|+++||..+.... ....|++.+ .++++++++.+++++||||++|+||.++|+.||++|++|+|+||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRD-DLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchh-hCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 9999999999999999997532211 122333332 47778899999999999999999999999999999999999999
Q ss_pred CccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002832 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK 672 (875)
Q Consensus 593 G~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~ 672 (875)
|+||+||||+||||||||+|+|+||++||+||+||||++|+.++++||++|+||+||+.|.++.|+..++.++...+.++
T Consensus 543 GvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~ 622 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN 622 (755)
T ss_pred CcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998877777666677
Q ss_pred CCcCHHHHHHHHHhhccccccccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCc
Q 002832 673 FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHE 752 (875)
Q Consensus 673 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (875)
++++|+|++|+|+++|++++++++|+++|+++|++|...+++..+++.|+++++.++++|++.+...++...++ ..
T Consensus 623 ~~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~- 698 (755)
T TIGR01647 623 FYFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG---LQ- 698 (755)
T ss_pred cchhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc---cc-
Confidence 88999999999999999899999999999999999999999999999999999998888877664221111111 00
Q ss_pred cchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCCCccccCchHHHHHHHHHHHHHHHHHH
Q 002832 753 KDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIA 810 (875)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 810 (875)
.. + ...++++|..++++|. .+|++|+++.+|+++|++++.++.++.+++.++++
T Consensus 699 ~~---~-~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 699 LL---H-GNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred cc---H-hhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHh
Confidence 00 1 2345666667777775 68999999999999999999999888777766654
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-133 Score=1223.61 Aligned_cols=808 Identities=26% Similarity=0.396 Sum_probs=666.6
Q ss_pred hccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCC
Q 002832 14 EAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGG 92 (875)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~ 92 (875)
.....|..+.++++++|+++.+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|++++|+++++++++.+
T Consensus 11 ~~~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~---- 86 (867)
T TIGR01524 11 NLLKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD---- 86 (867)
T ss_pred HHHHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh----
Confidence 345578899999999999998999999999999999999998876 467889999999999999999999999874
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEE------CCeEEEEecCCcCCCcEEEEecCCcc
Q 002832 93 KPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR------DGKWMEEDAAILVPGDIISVKLGDII 166 (875)
Q Consensus 93 ~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r------dg~~~~I~~~~Lv~GDiv~l~~G~~v 166 (875)
+|.++++|+++++++..++++||+|+++++++|+++.+++++|+| ||++++|+++||||||+|.+++||+|
T Consensus 87 ---~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~V 163 (867)
T TIGR01524 87 ---DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDII 163 (867)
T ss_pred ---hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEE
Confidence 899999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred ccceEEEecCCeeeeccccCCCCeeeecCCCC-------------ceeecceeccCceeEEEEEecchhhhhhhhhhhcc
Q 002832 167 PADARLLEGDPLKIDQSALTGESLPVTKGPGD-------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS 233 (875)
Q Consensus 167 PaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 233 (875)
||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||+.+++++
T Consensus 164 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 243 (867)
T TIGR01524 164 PADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE 243 (867)
T ss_pred cccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC
Confidence 99999999998899999999999999998864 69999999999999999999999999999999988
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCC
Q 002832 234 TNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGA 313 (875)
Q Consensus 234 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~i 313 (875)
.++++|+|+.++++++++..+.++.+++.+++ +.....+|.+++..++++++++|||+||++++++++.|++||+|+|+
T Consensus 244 ~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~i 322 (867)
T TIGR01524 244 RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMI-NGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKV 322 (867)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHheeh-HHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCc
Confidence 66679999999999887654433332222222 22234567778888999999999999999999999999999999999
Q ss_pred ccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccc--cccChHHHHHHHhcCCh--
Q 002832 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV--ENQDAIDAAIVGMLADP-- 389 (875)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~-- 389 (875)
++|+++++|+||++|++|||||||||+|+|+|.+.. . ..+.+.++++.+++.++.. ..+||+|.|++.++.+.
T Consensus 323 lvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~ 399 (867)
T TIGR01524 323 IVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAA 399 (867)
T ss_pred EEccchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhch
Confidence 999999999999999999999999999999998753 1 2244556677766654432 23699999998876432
Q ss_pred HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHhcCC
Q 002832 390 KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKFAERGL 459 (875)
Q Consensus 390 ~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~ 459 (875)
...+..++.++++||||++|+|++++.+.++.++.++||+||.++++|++ +++.++++.+.+++++++|+
T Consensus 400 ~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~ 479 (867)
T TIGR01524 400 RQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGI 479 (867)
T ss_pred hhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCC
Confidence 22345678899999999999999988766666788999999999999964 23446678888999999999
Q ss_pred eEEEEEEEecCCCCc---CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC
Q 002832 460 RSLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY 536 (875)
Q Consensus 460 rvl~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~ 536 (875)
|++++||++++..+. +..|++|+|+|+++|+||||||++++|++||++||+|+|+||||+.||.++|+++||..
T Consensus 480 rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--- 556 (867)
T TIGR01524 480 RVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--- 556 (867)
T ss_pred EEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC---
Confidence 999999998765432 12478999999999999999999999999999999999999999999999999999963
Q ss_pred CCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHH
Q 002832 537 PSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAA 616 (875)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~a 616 (875)
..+++|.+++. ++++++++.+++++||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+|
T Consensus 557 -~~v~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvA 634 (867)
T TIGR01524 557 -NDFLLGADIEE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIA 634 (867)
T ss_pred -CCeeecHhhhh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHH
Confidence 35788888774 7888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcCHHHHHHHHHhhcccccccc
Q 002832 617 RSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVLIIAILNDGTIMTIS 695 (875)
Q Consensus 617 k~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~ 695 (875)
|++||+||+||||++|+.++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|+++++++
T Consensus 635 k~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~ 714 (867)
T TIGR01524 635 KEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLP 714 (867)
T ss_pred HHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998877766655555 79999999999999997789999
Q ss_pred CCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHH
Q 002832 696 KDRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTIS 773 (875)
Q Consensus 696 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (875)
+|++++.. +|++|..+.+...+++.|++.++.+++.|++.+.... .. +... ....++.+|..++++
T Consensus 715 ~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~---~~~~---~~~~~t~~f~~~~~~ 782 (867)
T TIGR01524 715 WDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------AN---TVEE---QALFQSGWFVVGLLS 782 (867)
T ss_pred CCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cc---chhh---hhHHHHHHHHHHHHH
Confidence 99987653 5555666667777888898887777766655432110 00 0000 012345567777777
Q ss_pred HH-HHHHHhcCCCccccCchHHHHH-HHHHHHHHHHHHHHhhcccccccCch--hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 774 QA-LIFVTRARSWSFVDRPGLLLVL-AFAVAQLIATLIAVYANWSFAAIEGV--GWGWAGVVWLYNLIFYIPLDFIKFFI 849 (875)
Q Consensus 774 ~~-~~~~~r~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~ 849 (875)
|+ ++|++|+++.+++.++..+..+ +.++.+++.+++|+.+.-.++.+.++ +|..|++++.+++. ++.|+.|.+.
T Consensus 783 ~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~ 860 (867)
T TIGR01524 783 QTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFY 860 (867)
T ss_pred HHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 75 6899999875555554333333 33333344444443210123445544 33334444444443 5678888654
Q ss_pred HH
Q 002832 850 RY 851 (875)
Q Consensus 850 r~ 851 (875)
.+
T Consensus 861 ~~ 862 (867)
T TIGR01524 861 IR 862 (867)
T ss_pred HH
Confidence 43
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-134 Score=1229.54 Aligned_cols=806 Identities=32% Similarity=0.476 Sum_probs=660.0
Q ss_pred hccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Q 002832 14 EAVDLENVPME--EVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALAN 89 (875)
Q Consensus 14 ~~~~~~~~~~~--~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~ 89 (875)
...+||..+.+ ++...+.++ .+||+++|+.+|+++||+|+++..+ .+.|..|+++|++|+.++|+++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34578898888 999999887 6799999999999999999999655 678899999999999999999999999985
Q ss_pred CCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCc
Q 002832 90 GGGKPPDW----QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDI 165 (875)
Q Consensus 90 ~~~~~~~~----~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~ 165 (875)
.| .++..|..++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||++++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 55 55668888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEecCCeeeeccccCCCCeeeecCC--------------CCceeecceeccCceeEEEEEecchhhhhhhhhhh
Q 002832 166 IPADARLLEGDPLKIDQSALTGESLPVTKGP--------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (875)
Q Consensus 166 vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~ 231 (875)
||||++|+++++++||||+|||||.|+.|.+ .|++|+||.+.+|++.++|++||++|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999999999999999999999963 47899999999999999999999999999999999
Q ss_pred ccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHh
Q 002832 232 DST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSL 310 (875)
Q Consensus 232 ~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~ 310 (875)
... ...+|+|+.+++++++++.+.++..++.++..+......|.+.+..+++++++++|++||+.++++++.|+++|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 7899999999999888655444433333333322223347889999999999999999999999999999999999
Q ss_pred cCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCC---------hHHHHHHHHHhccc--c------
Q 002832 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD---------ADAVVLMAARASRV--E------ 373 (875)
Q Consensus 311 ~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~---------~~~~l~~~~~~~~~--~------ 373 (875)
+++++|+++++|+||++|+||+|||||||+|+|+|.+++........+ ...++..++.|+.. .
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999987542011111 11245555566532 2
Q ss_pred ccChHHHHHHHhcC------ChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC-------C
Q 002832 374 NQDAIDAAIVGMLA------DPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN-------K 440 (875)
Q Consensus 374 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~-------~ 440 (875)
.+||.|.|+++... +....+..+++++++||||+||||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 46999999998764 3344556678899999999999999999977777999999999999999984 4
Q ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc----CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcC
Q 002832 441 SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK----ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITG 516 (875)
Q Consensus 441 ~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTG 516 (875)
++.++.+.+..++|+++|+||+++|||..+..+. +..|+||+|+|+++|+||||+|++++|+.|++|||++||+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5678899999999999999999999998765543 578999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccC
Q 002832 517 DQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVND 596 (875)
Q Consensus 517 D~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~ND 596 (875)
||+.||++||++||+..+.....+++|.+++. ++++++.+.+++++||||+||+||.++|++||++|++|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~-l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELDA-LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhhh-cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 99999999999999976533245889999885 77889999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCceEEec-CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-C
Q 002832 597 APALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWK-F 673 (875)
Q Consensus 597 apALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~-~ 673 (875)
|||||+|||||||| +|+|+||+||||+++||||++|+.+|++||++|.|++|++.|.+++|+..++.++++.+ .++ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998 89999999999999999999999999999999999999999999999997666655544 344 6
Q ss_pred CcCHHHHHHHHHhhccc-cccccCCC-----C-CCCCCCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcc
Q 002832 674 DFPPFMVLIIAILNDGT-IMTISKDR-----V-KPSPLPDS--WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRT 744 (875)
Q Consensus 674 ~~~~~~~l~~~~~~~~~-~~~l~~~~-----~-~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 744 (875)
|++|+|++|+|+++|.+ +++++.++ + +|+++|.. |..+.++.+.+..|...++..++.|.+....... ..
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~-~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIA-NT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc
Confidence 89999999999999997 57777664 2 33345554 4434444446677777777777776666532110 00
Q ss_pred cccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccC---chHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002832 745 FGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDR---PGLLLVLAFAVAQLIATLIAVYAN--WSFAA 819 (875)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 819 (875)
.+. .. ......++.|+.+++..+++.+.+|+.+.+|++. +++.++.+++...++...+.+.+. ...+.
T Consensus 810 ~~~-----~~--~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~ 882 (917)
T COG0474 810 LGL-----DL--FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQ 882 (917)
T ss_pred cch-----hh--HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhcc
Confidence 000 00 0112344444444444445789999987776554 455555555544433333322222 12345
Q ss_pred cCchhhHHHHHHHHHH
Q 002832 820 IEGVGWGWAGVVWLYN 835 (875)
Q Consensus 820 ~~~~~~~~~~~~~~~~ 835 (875)
..++++..|+.+..++
T Consensus 883 ~~~~~~~~~~~~~~~~ 898 (917)
T COG0474 883 PTPLSLFEWLIAIAVA 898 (917)
T ss_pred CCCCcHHHHHHHHHHH
Confidence 5555544444444444
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-129 Score=1201.30 Aligned_cols=837 Identities=22% Similarity=0.353 Sum_probs=674.1
Q ss_pred hccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC
Q 002832 14 EAVDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (875)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~ 91 (875)
...+||..+.+|+++.|+++ .+|||++||++|+++||+|++++++ .+.|+.|+++|++|++++|+++++++++.....
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 33689999999999999998 6699999999999999999998755 567889999999999999999999988764211
Q ss_pred ------CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCc
Q 002832 92 ------GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDI 165 (875)
Q Consensus 92 ------~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~ 165 (875)
....+|.+++++++++++++.++++||+|+++.+++++++.+++++|+|||++++|+++||||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 12247889998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEecCCeeeeccccCCCCeeeecCCCC----------ceeecceeccCceeEEEEEecchhhhhhhhhhhccc-
Q 002832 166 IPADARLLEGDPLKIDQSALTGESLPVTKGPGD----------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (875)
Q Consensus 166 vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~----------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (875)
|||||++++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|.+||+.+++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999988899999999999999998763 799999999999999999999999999999988776
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCc
Q 002832 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (875)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~il 314 (875)
.+++|+++.++++.+++..+.++..++.+++ +...+..|.+.+..++++++++|||+||++++++++.++++|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 5679999999999887544333222222222 223345677788888899999999999999999999999999999999
Q ss_pred cccchhhhhccCceEEEecccCccccCcccceeeeEEec--c-CC--------CC-----hHHHHHHHHHhccc------
Q 002832 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF--A-KG--------VD-----ADAVVLMAARASRV------ 372 (875)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~-~~--------~~-----~~~~l~~~~~~~~~------ 372 (875)
+|+++++|+||++|++|||||||||+|+|+|.+++++.. . .+ .+ .+.++.+++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 999999999999999999999999999999998764210 0 00 11 12455556665421
Q ss_pred ---------cccChHHHHHHHhcC----ChHHHhhcccEEEEecCCCCCceEEEEEEcC---CCeEEEEEcCcHHHHHHh
Q 002832 373 ---------ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDS---EGKMHRVSKGAPEQILNL 436 (875)
Q Consensus 373 ---------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~---~g~~~~~~KGa~e~i~~~ 436 (875)
..+||.|.|+++++. +..+.+..++.++.+||+|+||||++++... ++++++++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 135899999988753 2334566789999999999999999887532 246789999999999999
Q ss_pred ccC----------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc--------C---CCCCCeeEEEEeccCCCCCC
Q 002832 437 VRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK--------E---SSGGPWQFIGLMPLFDPPRH 495 (875)
Q Consensus 437 ~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~--------~---~~e~~l~~lG~i~~~D~lr~ 495 (875)
|+. +++.++.+.+.+++++++|+||+++||+.+++++. + ..|++|+|+|+++++|||||
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 963 23557788899999999999999999998864321 1 12789999999999999999
Q ss_pred ChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----------------------CCcccccccccccCCcc
Q 002832 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------------------PSSALLGQNKDESIVAL 553 (875)
Q Consensus 496 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------------------~~~~~~~~~~~~~~~~~ 553 (875)
|++++|++|+++||+++|+|||++.||.++|+++|+..+.. ...+++|.+++. ++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHH
Confidence 99999999999999999999999999999999999964321 124788888874 7778
Q ss_pred cHHHHhhhCc--EEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCChh
Q 002832 554 PVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 630 (875)
Q Consensus 554 ~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~ 630 (875)
++++.+++++ ||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||++|+||||+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8999988875 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcCHHHHHHHHHhhccc-cccccCCCCCCC------
Q 002832 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDGT-IMTISKDRVKPS------ 702 (875)
Q Consensus 631 ~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~------ 702 (875)
+|++++++||++|+|++|++.|.++.|+..++..+++.+ ..+.|++|+|++|+|+++|.+ ++++++|++.+.
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 999999999999999999999999999998776666544 345689999999999999986 699999876432
Q ss_pred CCCC-chhh-HHHH-HHHHHHHHHHHHHHHHHHHHHHhc-CcCCc-cccc---------ccCCccchhhH--------Hh
Q 002832 703 PLPD-SWKL-AEIF-TTGVILGGYLAMMTVIFFWAAYQT-DFFPR-TFGV---------SSLHEKDIDDW--------KK 760 (875)
Q Consensus 703 ~~~~-~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~~~---------~~~~~~~~~~~--------~~ 760 (875)
+++. .... +..+ .+++..|+++++..++.|++.++. ++... .++. .+..+.....| ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 2221 1122 2333 344566888888888777655431 21110 0110 00000000000 01
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhcCCCccc--cCchHHHHHHHHHHHHHHHHHHHhhc-ccccccCchhhHHHHHHHHHHH
Q 002832 761 LASAIYLQVSTISQA-LIFVTRARSWSFV--DRPGLLLVLAFAVAQLIATLIAVYAN-WSFAAIEGVGWGWAGVVWLYNL 836 (875)
Q Consensus 761 ~~~~~~~~~~~~~~~-~~~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 836 (875)
.+++++|..++++|+ +++++|+++.+++ ..+|++++.++++.+++..++.+.+. -.++.+.+++|.+|+.++++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 970 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSL 970 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence 357788888888896 6799999776543 23566666655544444433322221 2355678888888899999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 002832 837 IFYIPLDFIKFFIRYA 852 (875)
Q Consensus 837 ~~~~~~~~~k~~~r~~ 852 (875)
+.+++.+++|++.|++
T Consensus 971 ~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 971 LIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999988764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-128 Score=1185.65 Aligned_cols=800 Identities=26% Similarity=0.395 Sum_probs=667.6
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCcccccc-ccHHHHHHHHH-HhHHHHHHHHHHHHHHHHHhCC
Q 002832 16 VDLENVPMEEVFETLRCN-KEGLS-TEAAEERLTIFGYNKLEEKQ-ESKILKFLGFM-WNPLSWVMEAAAIMAIALANGG 91 (875)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~-~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~l~~~~il~~~~~~~~ 91 (875)
.+||.++.++++++|+++ .+||| ++|+++|+++||+|+++.++ +++|+.|+++| ++|+.++|+++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 479999999999999998 56999 99999999999999999765 66788999999 8999999999999999884
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceE
Q 002832 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADAR 171 (875)
Q Consensus 92 ~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ 171 (875)
+|.+++++++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.+++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeeeccccCCCCeeeecCCC--------------CceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CC
Q 002832 172 LLEGDPLKIDQSALTGESLPVTKGPG--------------DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 236 (875)
Q Consensus 172 ll~g~~l~VdeS~LTGEs~pv~K~~~--------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~ 236 (875)
|++|+++.||||+|||||.|+.|.++ +++|+||.|.+|+++++|++||.+|++||+.++++++ .+
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 99998789999999999999999886 3799999999999999999999999999999999876 56
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccc
Q 002832 237 QGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITK 316 (875)
Q Consensus 237 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk 316 (875)
++|+|+.++++++++..+.++.+++.+++.| ..+.+|.+.+...+++++++|||+||++++++++.+++||+|+|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 8999999999988764433222222222222 234567788888999999999999999999999999999999999999
Q ss_pred cchhhhhccCceEEEecccCccccCcccceeeeEEec-c---CC--C-------------------ChHHHHHHHHHhcc
Q 002832 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF-A---KG--V-------------------DADAVVLMAARASR 371 (875)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~-~---~~--~-------------------~~~~~l~~~~~~~~ 371 (875)
+++++|+||++|++|||||||||+|+|+|.+++.... . .+ . ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 9999999999999999999999999999988753110 0 00 0 01234555555443
Q ss_pred c--------cccChHHHHHHHhcCCh--HHHhhcccEEEEecCCCCCceEEEEEEc-CCCeEEEEEcCcHHHHHHhccC-
Q 002832 372 V--------ENQDAIDAAIVGMLADP--KEARANIQEVHFLPFNPTDKRTALTYID-SEGKMHRVSKGAPEQILNLVRN- 439 (875)
Q Consensus 372 ~--------~~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pf~~~~k~~sv~~~~-~~g~~~~~~KGa~e~i~~~~~~- 439 (875)
. ..+||+|.|++.++... ...+..++.++++||+|++|||+++++. .+++++.++||+||.++.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 2 12579999998875422 2234468889999999999999998875 3567889999999999999963
Q ss_pred ----------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCC
Q 002832 440 ----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV 509 (875)
Q Consensus 440 ----------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI 509 (875)
+++.++++.+.+++++++|+|++++||+++ +++|+|+|+++++||+|||++++|++||++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 134466788888999999999999999974 46799999999999999999999999999999
Q ss_pred cEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEE
Q 002832 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (875)
Q Consensus 510 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam 589 (875)
+++|+|||++.||.++|+++||... ...+++|++++. ++++++++.+++++||||++|+||.++|+.+|++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~-~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDA-MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHh-CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999754 234678888774 7888899999999999999999999999999999999999
Q ss_pred EcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668 (875)
Q Consensus 590 ~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~ 668 (875)
+|||+||+||||+|||||||| +|+|+|+++||++|+||||++|+.++++||++|+||+|++.|.++.|+..++.++++.
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999 7999999999999999999999999999999999999999999999998776654443
Q ss_pred -HhhcCCcCHHHHHHHHHhhccc-cccccCCCCCC------CCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 002832 669 -LIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTD 739 (875)
Q Consensus 669 -~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~------~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 739 (875)
+..+.|++|+|++|+|+++|.+ ++++++|++.+ |+++.. ...+.++..+++.|+++++.+++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 3456799999999999999988 48999987633 222322 2334567777888988887777666544311
Q ss_pred cCCcccccccCCccchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---CchHHHHHHHHHHHHHHHHHHHhhc-
Q 002832 740 FFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAVYAN- 814 (875)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~- 814 (875)
+ ... ...++++|..++++|+ +.|++|+++.+++. ..|.+++.++++..++.. +.+|.+
T Consensus 782 ------~------~~~----~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~p~ 844 (884)
T TIGR01522 782 ------G------VIT----ARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQL-LVIYFPP 844 (884)
T ss_pred ------C------cch----hhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0 001 2346777777788885 68999997766543 235555555554433332 223321
Q ss_pred -ccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002832 815 -WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYA 852 (875)
Q Consensus 815 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 852 (875)
-.++.+.|++|..|+.+++++++.+++.|++|+++|++
T Consensus 845 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 845 LQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 23456788889888999999999999999999988765
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-126 Score=1175.91 Aligned_cols=816 Identities=22% Similarity=0.340 Sum_probs=654.7
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccccccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHHhC------C
Q 002832 22 PMEEVFETLRCN-KEGLS--TEAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANG------G 91 (875)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~--~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~------~ 91 (875)
+.++++++|+++ ++||| ++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 688999999999 56999 999999999999999998765 6678899999999999999999999987632 1
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccce
Q 002832 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMAS-LAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADA 170 (875)
Q Consensus 92 ~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~ 170 (875)
++..+|.++++++++++++..+++++|++++++.+++++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2234799999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEEecCCeeeeccccCCCCeeeecCCCCc--eeecceeccCceeEEEEEecchhhhhhhhhhhcccCCCCcHHHHHHHHH
Q 002832 171 RLLEGDPLKIDQSALTGESLPVTKGPGDS--VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248 (875)
Q Consensus 171 ~ll~g~~l~VdeS~LTGEs~pv~K~~~~~--v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (875)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|+++++|++||++|++||+.++++++++++|+++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999778999999999999999998765 9999999999999999999999999999999987766789999999988
Q ss_pred HHHHHHHHHHHHHHHHH---hhhcc---c---------CCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCC
Q 002832 249 NFCICSIAVGMIVEIIV---MYPIQ---H---------RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGA 313 (875)
Q Consensus 249 ~~~~~~~~~~~~~~~~~---~~~~~---~---------~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~i 313 (875)
+++..+.++.+++.+++ .+... . .++.+.+..++++++++|||+||++++++++.++++|+|+|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 77543222211111111 11111 1 135566778889999999999999999999999999999999
Q ss_pred ccccchhhhhccCceEEEecccCccccCcccceeeeEEec--c-CC----CC--hHHHHHHHHH-hccc-----------
Q 002832 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF--A-KG----VD--ADAVVLMAAR-ASRV----------- 372 (875)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~-~~----~~--~~~~l~~~~~-~~~~----------- 372 (875)
++|+++++|+||++|++|||||||||+|+|+|.+++.... . .+ .+ ..+++..++. ++..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999988764211 0 00 01 1122333322 2221
Q ss_pred cccChHHHHHHHhcC----ChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCC--------
Q 002832 373 ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-------- 440 (875)
Q Consensus 373 ~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~-------- 440 (875)
..+||+|.|+++++. +....+..++.++.+||+|++|+|+++++..+++++.++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 126899999988753 22333456778889999999999999988766778899999999999999641
Q ss_pred --hHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc---CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEc
Q 002832 441 --SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (875)
Q Consensus 441 --~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miT 515 (875)
++.++++.+.+++++++|+||+++||++++.++. +..|++|+|+|+++++||+|||++++|++||++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 1245678888999999999999999999864332 23478999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCcc
Q 002832 516 GDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595 (875)
Q Consensus 516 GD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~N 595 (875)
|||+.||.++|+++||..+ ...+++|++++. +.++++++++++++||||++|+||.++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999754 235788888875 7788899999999999999999999999999999999999999999
Q ss_pred CHHHHhhCCceEEec-CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcC
Q 002832 596 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA-LIWKF 673 (875)
Q Consensus 596 DapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~~~ 673 (875)
|+||||+|||||||| +|+|+||++||++|+||||++|++++++||++|+||+|++.|.+++|+..++..+++. +..+.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 9999999999999999999999999999999999999999999999998766655544 34567
Q ss_pred CcCHHHHHHHHHhhccc-cccccCCCCCCC------CCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCccc
Q 002832 674 DFPPFMVLIIAILNDGT-IMTISKDRVKPS------PLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTF 745 (875)
Q Consensus 674 ~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 745 (875)
|++|+|++|+|+++|.+ ++++++|++.+. +++. +...+.++..++..|+++++..++++++... ++...
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~- 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVS- 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhccc-
Confidence 99999999999999976 689998876332 2222 2233456777888899988888777665432 11100
Q ss_pred ccccCCccchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCCC-ccccC--chHHHHHHHHHHHHHHHHHHHhhcccccccC
Q 002832 746 GVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSW-SFVDR--PGLLLVLAFAVAQLIATLIAVYANWSFAAIE 821 (875)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~-~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (875)
+......... ...+++.|.+++++|+ +.+++|+.+. +++.. .|++++.++.+..++..++..+. -.++.+.
T Consensus 837 ~~~~~~~~~~----~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~-~~~f~~~ 911 (941)
T TIGR01517 837 GPDEITSHQQ----GELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFG-GSFFSTV 911 (941)
T ss_pred Cccccccccc----chhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHH-HHHhccc
Confidence 0000000001 2345666767777775 6789998653 22211 24455444443333332222222 2345678
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 822 GVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (875)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~k~~ 848 (875)
|++|..|+.+++++++.+++.++.|.+
T Consensus 912 ~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 912 SLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888889999999999999988875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-129 Score=1081.81 Aligned_cols=811 Identities=22% Similarity=0.325 Sum_probs=632.9
Q ss_pred HHHHHHHcCCC-CCCCCH--HHHHHHHHhcCCCccccccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCC-CCCCch
Q 002832 23 MEEVFETLRCN-KEGLST--EAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANGG-GKPPDW 97 (875)
Q Consensus 23 ~~~~~~~l~~~-~~GL~~--~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~-~~~~~~ 97 (875)
.++++++|+++ ..||+. +|.++|++.||.|.+|++++ ++|...|+.+.+.-.++|.++|++|+.++++. +.+..|
T Consensus 103 v~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW 182 (1034)
T KOG0204|consen 103 VEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGW 182 (1034)
T ss_pred HHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCccc
Confidence 78999999999 569976 88999999999999998774 56667789999999999999999999998754 346699
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecC
Q 002832 98 QDFVGIVTLLLINSTISFIEENNAGNAAAALM-ASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD 176 (875)
Q Consensus 98 ~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~-~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~ 176 (875)
++++.|++.+++..+...+.+|+.++..+.|. .....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|+
T Consensus 183 ~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn 262 (1034)
T KOG0204|consen 183 IEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGN 262 (1034)
T ss_pred ccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEecc
Confidence 99998876544333333333333333333333 23456789999999999999999999999999999999999999999
Q ss_pred CeeeeccccCCCCeeeecCC--CCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHH-
Q 002832 177 PLKIDQSALTGESLPVTKGP--GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCI- 252 (875)
Q Consensus 177 ~l~VdeS~LTGEs~pv~K~~--~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~- 252 (875)
+|.+|||++||||.++.|.+ +.++++||.+.+|.++++|+++|++|+.|++..++... .+++|+|-++++++...-
T Consensus 263 ~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk 342 (1034)
T KOG0204|consen 263 SLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGK 342 (1034)
T ss_pred ceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHH
Confidence 99999999999999999987 45899999999999999999999999999999999887 589999999988765421
Q ss_pred --HHHHHHHHHHHHHhhhcc-----cC---Cch----hhHHHH----HHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCc
Q 002832 253 --CSIAVGMIVEIIVMYPIQ-----HR---KYR----PGIDNL----LVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (875)
Q Consensus 253 --~~~~~~~~~~~~~~~~~~-----~~---~~~----~~~~~~----~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~il 314 (875)
...+...++.++..|+.. .. .+. +.+..+ +.++++++|||||+++++++++++++|.+.|.+
T Consensus 343 ~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~L 422 (1034)
T KOG0204|consen 343 IGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNL 422 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhH
Confidence 111111111122222211 01 111 112222 245678999999999999999999999999999
Q ss_pred cccchhhhhccCceEEEecccCccccCcccceeeeEEeccCC--------CChH--HHH-HHHHHhcc------------
Q 002832 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKG--------VDAD--AVV-LMAARASR------------ 371 (875)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~--------~~~~--~~l-~~~~~~~~------------ 371 (875)
||+++|+|++|+.++||+|||||||+|+|+|.+.++....+. .++. +++ ...+.++.
T Consensus 423 VRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~ 502 (1034)
T KOG0204|consen 423 VRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQ 502 (1034)
T ss_pred HHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcC
Confidence 999999999999999999999999999999998776322111 2221 111 11121110
Q ss_pred -ccccChHHHHHHHhc----CChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC-------
Q 002832 372 -VENQDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN------- 439 (875)
Q Consensus 372 -~~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~------- 439 (875)
...++|.|.|++++. .+.+..|.+.+.++.+||+|.+|+|+++++.++|..+.++|||+|.+++.|..
T Consensus 503 ~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~ 582 (1034)
T KOG0204|consen 503 PEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGE 582 (1034)
T ss_pred ccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCC
Confidence 113589999998763 35566677888999999999999999999977766349999999999999974
Q ss_pred ----ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCC-------C-cCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhC
Q 002832 440 ----KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG-------R-KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNL 507 (875)
Q Consensus 440 ----~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~-------~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 507 (875)
+++.++.+.+.++.|+.+|+|++|+||++.... + .+..+.+|+++|+++++||+|||++++|+.||+|
T Consensus 583 ~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~A 662 (1034)
T KOG0204|consen 583 LVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRA 662 (1034)
T ss_pred EeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHc
Confidence 245566889999999999999999999985332 1 1356789999999999999999999999999999
Q ss_pred CCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEE
Q 002832 508 GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHIC 587 (875)
Q Consensus 508 GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V 587 (875)
||+|.|+||||..||++||.+|||.++......+.|++..+ ++++++++++++.+|+||.+|.||..+|+.|+++||+|
T Consensus 663 GItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~-~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VV 741 (1034)
T KOG0204|consen 663 GITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE-LSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVV 741 (1034)
T ss_pred CcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh-cCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEE
Confidence 99999999999999999999999998766668899999985 89999999999999999999999999999999999999
Q ss_pred EEEcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 588 GMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 666 (875)
Q Consensus 588 am~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~ 666 (875)
|+||||+||+||||+||||.||| .|||+|||+|||||+||||++|+++++|||++|+||+||++|+++.|+..++..+.
T Consensus 742 AVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv 821 (1034)
T KOG0204|consen 742 AVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFV 821 (1034)
T ss_pred EEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhh
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999864444343
Q ss_pred -HHHhhcCCcCHHHHHHHHHhhccc-cccccCCCCCC-------CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002832 667 -LALIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKP-------SPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQ 737 (875)
Q Consensus 667 -~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 737 (875)
+...-..|++++|+||.|+++|.+ ++||+.|++.+ ..|..+...+-+++..+...+|+-++.+.+.+....
T Consensus 822 ~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~ 901 (1034)
T KOG0204|consen 822 SACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS 901 (1034)
T ss_pred hhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 434445799999999999999998 69999998733 223344445567777888888888776655443321
Q ss_pred cCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCC-Cc----cccCchHH-HHHHHHHHHHHHHHHH
Q 002832 738 TDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARS-WS----FVDRPGLL-LVLAFAVAQLIATLIA 810 (875)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~-~~----~~~~~~~~-l~~~~~~~~~~~~~~~ 810 (875)
.|+.+...++++ ...-++.|..++++|+ +-++.|.-. .. .++|+-+. .+...+.+++ ++.
T Consensus 902 ------if~~~~~~~~~~----~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~Qv---iIv 968 (1034)
T KOG0204|consen 902 ------IFGLNGPLHSPP----SVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQV---IIV 968 (1034)
T ss_pred ------hhccCCCCCCch----hhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhh---hhh
Confidence 122211111122 2333566677777775 457888743 11 12222111 1111112222 222
Q ss_pred HhhcccccccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 811 VYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (875)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 848 (875)
.++ -.++...+++|..|++++++++..++.-.+.|.+
T Consensus 969 eF~-g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 969 EFG-GAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhc-CcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 232 2346789999999999999998888887777754
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-124 Score=1043.74 Aligned_cols=854 Identities=23% Similarity=0.386 Sum_probs=697.2
Q ss_pred cchhHHHHhhhhc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHH
Q 002832 3 SKAETMEAVLKEA-VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEA 79 (875)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~ 79 (875)
+|.+.+++.++|. ++.|.+|.+|+.++++++ .+|||.+++.+++++.|+|.+++|+ .+.|.+|++|+++.+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 3556778889998 899999999999999999 7899999999999999999998876 567889999999999999999
Q ss_pred HHHHHHHHHhCCC-----CCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcC
Q 002832 80 AAIMAIALANGGG-----KPP-DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILV 153 (875)
Q Consensus 80 ~~il~~~~~~~~~-----~~~-~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv 153 (875)
+++++++.+.... ++. ..+-+.++..++++.....|+||.+..+.+++++++.|+.++|+|||+...+.++|||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 9999998753211 111 2222333444556678889999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCC----------CceeecceeccCceeEEEEEecchhh
Q 002832 154 PGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG----------DSVYSGSTCKQGEIEAVVIATGVHTF 223 (875)
Q Consensus 154 ~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~----------~~v~~Gt~v~~G~~~~~V~~tG~~T~ 223 (875)
+||+|.++-||+||||.|++++.++++|+|+|||||.|..+++. |+.|.+|.+.+|.++++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 99999999999999999999999999999999999999998763 67899999999999999999999999
Q ss_pred hhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHH
Q 002832 224 FGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (875)
Q Consensus 224 ~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~ 302 (875)
+|+|+.+...- ..++|+++.++.+..+.....+ .+.+.++......+..|..++..++.++++.+|+|||.+++++++
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi-~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAI-FLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHH-HHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 99999987764 7789999999888766432221 111222222222366778888888889999999999999999999
Q ss_pred HHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccC----------------CCChHHHHHHH
Q 002832 303 IGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK----------------GVDADAVVLMA 366 (875)
Q Consensus 303 ~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~----------------~~~~~~~l~~~ 366 (875)
.-++||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.|++..-. +..-.++.+++
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987642110 11223566677
Q ss_pred HHhccc---------------cccChHHHHHHHhc----CChHHHhhcccEEEEecCCCCCceEEEEEEcCC---CeEEE
Q 002832 367 ARASRV---------------ENQDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDSE---GKMHR 424 (875)
Q Consensus 367 ~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~---g~~~~ 424 (875)
..|+.. ..+|+.+.|++++. .+..+.+..++.+.++||+|.+|+.-.++...+ .+..+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 766632 14678899998864 344667888999999999999999887776433 56788
Q ss_pred EEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc-----------CCCCCCeeE
Q 002832 425 VSKGAPEQILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-----------ESSGGPWQF 483 (875)
Q Consensus 425 ~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~-----------~~~e~~l~~ 483 (875)
..|||||.++++|+. ++...+.+++....+...|.||++++++.+++.+. .....+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 899999999999984 34567888899999999999999999998875531 124567999
Q ss_pred EEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----------------------CCccc
Q 002832 484 IGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------------------PSSAL 541 (875)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------------------~~~~~ 541 (875)
+|++++.||||..+|+++..||.|||||+|+||||+.||+++|+++||..+.. ...++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 99999999999999999999999999999999999999999999999754211 11246
Q ss_pred ccccccccCCcccHHHHhhhCc--EEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhh
Q 002832 542 LGQNKDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 618 (875)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~ 618 (875)
.|.++. +++.+++++++++.. ||||+||+||+.||+.+|++|.+|+++|||+||+||||+|||||||| .|+|++|+
T Consensus 662 hG~eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred eccccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 666665 488889999998766 99999999999999999999999999999999999999999999999 99999999
Q ss_pred ccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCcCHHHHHHHHHhhccc-cccccC
Q 002832 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA-LIWKFDFPPFMVLIIAILNDGT-IMTISK 696 (875)
Q Consensus 619 aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~-~~~l~~ 696 (875)
|||+||+||||++|+..|++||-+|+|+||.|.|.+++|++.+..++.++ +..|+|+.++++|.+.+.+|+. ++++++
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAY 820 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAY 820 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhc
Confidence 99999999999999999999999999999999999999999887766544 4678899999999999999998 599999
Q ss_pred CCC------CCCCCCCc--hhhHH-HHHHHHHHHHHHHHHHHHHHHHH-HhcCcCCccc----------ccccCCccchh
Q 002832 697 DRV------KPSPLPDS--WKLAE-IFTTGVILGGYLAMMTVIFFWAA-YQTDFFPRTF----------GVSSLHEKDID 756 (875)
Q Consensus 697 ~~~------~~~~~~~~--~~~~~-~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~ 756 (875)
|.+ ++|+.|.. ....+ +...++.+|+++++..|+.|+.. +..+|+|... +.+++.++..+
T Consensus 821 E~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQ 900 (1019)
T KOG0203|consen 821 EKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQ 900 (1019)
T ss_pred cCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccc
Confidence 875 33443332 22233 56677899999999988766544 4466666431 22344444444
Q ss_pred hHH--------hHHHHHHHHHHHHHHH-HHHHHhcCCCcc--ccCchHHHHHHHHHHHHHHHHHHHhhc-ccccccCchh
Q 002832 757 DWK--------KLASAIYLQVSTISQA-LIFVTRARSWSF--VDRPGLLLVLAFAVAQLIATLIAVYAN-WSFAAIEGVG 824 (875)
Q Consensus 757 ~~~--------~~~~~~~~~~~~~~~~-~~~~~r~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 824 (875)
.|+ ..+.+.||..++..|+ -++.+.|++-+. .+..|+.++++++.-.++.+++.+.+. ...+.+.|+.
T Consensus 901 eWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~ 980 (1019)
T KOG0203|consen 901 EWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLK 980 (1019)
T ss_pred cccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCC
Confidence 443 1245667777778886 355565655554 445788888888877666666544432 2234577888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Q 002832 825 WGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDL 860 (875)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~ 860 (875)
|.||+..++++++.++++|++|++.|+| |.+|-.
T Consensus 981 ~~~wl~a~P~~ilIfvydE~Rk~~IR~~--P~gw~e 1014 (1019)
T KOG0203|consen 981 FQWWLVAFPFGILIFVYDEVRKLFIRRY--PGGWLE 1014 (1019)
T ss_pred cEEEEecccceeeeeeHHHHHhHhhhhC--CCchhh
Confidence 9999999999999999999999999987 345533
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-118 Score=1099.21 Aligned_cols=783 Identities=28% Similarity=0.386 Sum_probs=621.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEEC
Q 002832 65 FLGFMWNPLSWVMEAAAIMAIALANGG---GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD 141 (875)
Q Consensus 65 ~~~~~~~~~~~~l~~~~il~~~~~~~~---~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd 141 (875)
+++||++|++++|+++++++++++... ....+|.++++|++++++++.++++||+|+++.+++|+++.+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 478999999999999999999986432 12248999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCC-------------Cceeecceecc
Q 002832 142 GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG-------------DSVYSGSTCKQ 208 (875)
Q Consensus 142 g~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~-------------~~v~~Gt~v~~ 208 (875)
|++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998889999999999999999875 78999999999
Q ss_pred CceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-c----cCCch----hhH
Q 002832 209 GEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI-Q----HRKYR----PGI 278 (875)
Q Consensus 209 G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~----~~~ 278 (875)
|+++++|++||.+|++||+.++++++ .+++|+|+.+++++.++..+.++.+++.+++.... . ..+|. ..+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988876 66899999999998775443322222222211111 0 11222 233
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEe------
Q 002832 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI------ 352 (875)
Q Consensus 279 ~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~------ 352 (875)
...+++++++|||+||++++++++.+++||+++|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 34567889999999999999999999999999999999999999999999999999999999999998875321
Q ss_pred -----ccCCCC-------------------hHHHHHHHHHhccc------------cccChHHHHHHHhcCCh-------
Q 002832 353 -----FAKGVD-------------------ADAVVLMAARASRV------------ENQDAIDAAIVGMLADP------- 389 (875)
Q Consensus 353 -----~~~~~~-------------------~~~~l~~~~~~~~~------------~~~~~~~~ai~~~~~~~------- 389 (875)
.+.+++ .+.++..++.|+.. ..+||.|.|++.++.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 000000 12344555555531 13689999998764211
Q ss_pred -------------HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC-----------ChHHHH
Q 002832 390 -------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN-----------KSEIER 445 (875)
Q Consensus 390 -------------~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~-----------~~~~~~ 445 (875)
...+..++.++++||||+||||+++++. +++++.|+|||||.|+++|++ +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 0124567789999999999999999875 466889999999999999963 134567
Q ss_pred HHHHHHHHHHh-cCCeEEEEEEEecCCCC----------cCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEE
Q 002832 446 RVHAIIDKFAE-RGLRSLAVAYQEVPDGR----------KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514 (875)
Q Consensus 446 ~~~~~~~~~~~-~G~rvl~~A~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~mi 514 (875)
++.+.++++++ +|+||+++|||.+++++ .+..|++|+|+|+++++||||||++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCC--CCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcC
Q 002832 515 TGDQLAIAKETGRRLGMGTNMY--PSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (875)
Q Consensus 515 TGD~~~tA~~ia~~lGi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GD 592 (875)
|||++.||.++|+++|+..+.. ....++|++++. ++++++.+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 9999999999999999975322 123567777664 6677788888889999999999999999999999999999999
Q ss_pred CccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 002832 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IW 671 (875)
Q Consensus 593 G~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~ 671 (875)
|+||+||||+||||||||+|+++||++||+++.||||++|++++++||++|+|++|++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997776665543 45
Q ss_pred cCCcCHHHHHHHHHhhccc-cccccCCCCCC------CCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcCC
Q 002832 672 KFDFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQT-DFFP 742 (875)
Q Consensus 672 ~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~------~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 742 (875)
+.|++|+|++|+|+++|.+ ++++++|++++ |+++.. ...++.+..+++.|+++++.+++.|++.... ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999966 68888887633 222222 2334577788889999998877666554321 1110
Q ss_pred c--cc--ccccCCccchh--hHHhHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---CchHHHHHHHHHHHHHHHHHHHh
Q 002832 743 R--TF--GVSSLHEKDID--DWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAVY 812 (875)
Q Consensus 743 ~--~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 812 (875)
. .. +..+..+.... ......++++|.+++++|+ +.|++|+++.+++. ..|.+++.++++.+++. ++..|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALH-FLILY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHH-HHHHH
Confidence 0 00 00000000000 0002356778888888886 67999997766443 23555555544433332 22223
Q ss_pred hc--ccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 813 AN--WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIR 850 (875)
Q Consensus 813 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r 850 (875)
.+ -.++.+.|++|..|+++++++++++++.|++|+++|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22 234567889999999999999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-115 Score=1084.37 Aligned_cols=736 Identities=22% Similarity=0.266 Sum_probs=581.1
Q ss_pred CCCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHH
Q 002832 34 KEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTI 113 (875)
Q Consensus 34 ~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~ 113 (875)
.+|||++|+++|+++||+|+++.++++.++.|++++++||+++++++.++ |++. .+|.+++.++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l-~~~~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVIL-WLLD------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHH-HHhh------hhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999888888999999999998777776555 4442 3688899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEe--cCCccccceEEEecCCeeeeccccCCCCee
Q 002832 114 SFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVK--LGDIIPADARLLEGDPLKIDQSALTGESLP 191 (875)
Q Consensus 114 ~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~--~G~~vPaD~~ll~g~~l~VdeS~LTGEs~p 191 (875)
+++|++|+.+.++++.. .+++++|+|||++++|+++||||||+|.|+ +||+|||||+|++|+ +.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccc
Confidence 99999999998887643 567899999999999999999999999999 999999999999997 68999999999999
Q ss_pred eecCCC------------------Cceeecceecc-------CceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHH
Q 002832 192 VTKGPG------------------DSVYSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLT 245 (875)
Q Consensus 192 v~K~~~------------------~~v~~Gt~v~~-------G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~ 245 (875)
+.|.+. +++|+||.|.+ |.++++|++||.+|..|++.+.+..+ +..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 35999999985 78999999999999999999988766 55688888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhcc
Q 002832 246 AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMA 325 (875)
Q Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg 325 (875)
++..+++.+.+++++. .+......+.++.+.+..++.++++++|++||+++++++++|++||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7765543322222221 122222234577888899999999999999999999999999999999999999999999999
Q ss_pred CceEEEecccCccccCcccceeeeEEeccCC----------CChHHHHHHHHHhccc------cccChHHHHHHHhcCCh
Q 002832 326 GMDVLCSDKTGTLTLNKLSVDKNLIEIFAKG----------VDADAVVLMAARASRV------ENQDAIDAAIVGMLADP 389 (875)
Q Consensus 326 ~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----------~~~~~~l~~~~~~~~~------~~~~~~~~ai~~~~~~~ 389 (875)
++|++|||||||||+|+|+|.+++....... .....+....+.|+.. ..+||+|.|+.++.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999988653211000 1112233334444321 24799999999875311
Q ss_pred HHH-------------------hhcccEEEEecCCCCCceEEEEEEcC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHH
Q 002832 390 KEA-------------------RANIQEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHA 449 (875)
Q Consensus 390 ~~~-------------------~~~~~~l~~~pf~~~~k~~sv~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~ 449 (875)
.+. ...++.++.+||+|++|||+++++.. +++++.++|||||.|+++|... ..++++++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHH
Confidence 000 13577889999999999999999864 3567899999999999999853 35678889
Q ss_pred HHHHHHhcCCeEEEEEEEecCCC--------CcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHH
Q 002832 450 IIDKFAERGLRSLAVAYQEVPDG--------RKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (875)
Q Consensus 450 ~~~~~~~~G~rvl~~A~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 521 (875)
.+++++++|+||+|+|||++++. ++++.|+||+|+|+++|+||+|||++++|++||++||+++|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2355789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC---------------------------------------------------Ccccccccccc--
Q 002832 522 AKETGRRLGMGTNMYP---------------------------------------------------SSALLGQNKDE-- 548 (875)
Q Consensus 522 A~~ia~~lGi~~~~~~---------------------------------------------------~~~~~~~~~~~-- 548 (875)
|.++|+++||..+... ..+++|++++.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 01233333221
Q ss_pred cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC
Q 002832 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (875)
Q Consensus 549 ~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~ 628 (875)
.+.++++++++++++||||++|+||.++|+.||+.|++|+|||||+|||||||+||||||||++ |++ .|||+++.+||
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1233467788889999999999999999999999999999999999999999999999999965 555 79999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHhhccc-cccccCCCCCCC---CC
Q 002832 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKPS---PL 704 (875)
Q Consensus 629 ~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~ 704 (875)
|++|+.+|++||+++.|+++.+.|.+.+++...+.++. ....+.+++++|++|++++++.+ .++++.+++.+. ++
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999999876554433 23456899999999999999987 588888876432 23
Q ss_pred CC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcC
Q 002832 705 PD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRAR 783 (875)
Q Consensus 705 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 783 (875)
|. +......+...+..+++..+..++.|++.....|+...... +..+... .....++.|.+..+.++..+.+++.
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~T~~f~~~~~~~~~~~~~~~~ 998 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPV-DLEKENF---PNLLNTVLFFVSSFQYLITAIVNSK 998 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCC-CcccccC---ccHHHHHHHHHHHHHHHHheEEEcC
Confidence 33 33334556666677777777777666665543332111110 0000000 0123455555556666667777776
Q ss_pred CCcc
Q 002832 784 SWSF 787 (875)
Q Consensus 784 ~~~~ 787 (875)
..++
T Consensus 999 g~pf 1002 (1054)
T TIGR01657 999 GPPF 1002 (1054)
T ss_pred Ccch
Confidence 5443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-100 Score=956.03 Aligned_cols=789 Identities=18% Similarity=0.242 Sum_probs=576.8
Q ss_pred cCCCccccccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 49 FGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNA 124 (875)
Q Consensus 49 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~ 124 (875)
|.+|.+...|++.| +.|++||.++++++|++.++++++...... ..+...++++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--YRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--CccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998875 689999999999999999999998643221 123334555566668889999999999988
Q ss_pred HHHHhhccCCcEEEEEC-CeEEEEecCCcCCCcEEEEecCCccccceEEEecCC----eeeeccccCCCCeeeecCCC--
Q 002832 125 AAALMASLAPKSKVLRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG-- 197 (875)
Q Consensus 125 ~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~----l~VdeS~LTGEs~pv~K~~~-- 197 (875)
.++. ++++++|+|| |++++++++||+|||+|.|++||+||||++|+++++ +.||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 7654 4688999997 899999999999999999999999999999998654 78999999999999988631
Q ss_pred ----------------------------------------------Cceeecceecc-CceeEEEEEecchhhhhhhhhh
Q 002832 198 ----------------------------------------------DSVYSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (875)
Q Consensus 198 ----------------------------------------------~~v~~Gt~v~~-G~~~~~V~~tG~~T~~g~i~~~ 230 (875)
|++++||.+.+ |.+.|+|++||++|++++....
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~ 235 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ 235 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCC
Confidence 46889999998 8999999999999988764321
Q ss_pred hcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc----CCc---------------hhhHHHHHHHHHHhcCC
Q 002832 231 VDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH----RKY---------------RPGIDNLLVLLIGGIPI 291 (875)
Q Consensus 231 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~llv~~iP~ 291 (875)
...+.+++++.++++..+++++.++.+++..++...... ..| ...+..++.++..++|+
T Consensus 236 --~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 236 --APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred --CcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 235679999999999877554333332222222111111 012 11455677889999999
Q ss_pred chHHHHHHHHHHHH------HHHHhc----CCccccchhhhhccCceEEEecccCccccCcccceeeeEEec--cCC---
Q 002832 292 AMPTVLSVTMAIGS------HRLSLQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF--AKG--- 356 (875)
Q Consensus 292 ~Lp~~~~i~~~~~~------~~l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~~~--- 356 (875)
+||+++++++.+++ .+|.++ ++++|+++++|+||++++||+|||||||+|+|+++++.+... ..+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788874 599999999999999999999999999999999999875311 000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHhccc--------------cccChH
Q 002832 357 --------V--------------------D----------------ADAVVLMAARASRV--------------ENQDAI 378 (875)
Q Consensus 357 --------~--------------------~----------------~~~~l~~~~~~~~~--------------~~~~~~ 378 (875)
. + ..+++..++.|+.. ..++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 01233344444321 135899
Q ss_pred HHHHHHhcCCh---------H---------HHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC-
Q 002832 379 DAAIVGMLADP---------K---------EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN- 439 (875)
Q Consensus 379 ~~ai~~~~~~~---------~---------~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~- 439 (875)
|.|++.++... . .....++.++.+||+|+||||++++++++|++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99998864221 0 1124578899999999999999999988888899999999999999985
Q ss_pred ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc-------------------------CCCCCCeeEEEEeccCCCCC
Q 002832 440 KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-------------------------ESSGGPWQFIGLMPLFDPPR 494 (875)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~D~lr 494 (875)
.++.++.+.+.+++++.+|+||+++|||.+++.+. +..|+||+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788999999999999999999999875321 24589999999999999999
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC------------------------------------
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS------------------------------------ 538 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~------------------------------------ 538 (875)
||++++|++||+|||++||+|||+++||.+||++||+..+....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999997543211
Q ss_pred ---cccccccccccCCc---ccHHHHhhhCc--EEEEeCHHHHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 539 ---SALLGQNKDESIVA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 539 ---~~~~~~~~~~~~~~---~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
.+++|++++..+++ .++.+++.+++ ||||++|+||.++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 13444444322221 12444556666 99999999999999999998 99999999999999999999999987
Q ss_pred c--CccHHHhhccCEEecCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CcCHHHHHH
Q 002832 610 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKF----DFPPFMVLI 682 (875)
Q Consensus 610 g--~gtd~ak~aADivL~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~----~~~~~~~l~ 682 (875)
. +|. .|+++||+++.+ |+.+.+++ .+||++|+|+++++.|.++.|+..++..+++.++.++ ++.+++++|
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 3 333 467799999975 99999998 7899999999999999999999877777666554332 577888999
Q ss_pred HHHhhccc-ccccc-CCCCCC-------CC-----CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccccc
Q 002832 683 IAILNDGT-IMTIS-KDRVKP-------SP-----LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVS 748 (875)
Q Consensus 683 ~~~~~~~~-~~~l~-~~~~~~-------~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (875)
+|++.+.+ +++++ +|...+ |+ +.......+.+..+++.|++++++.+++.++.+..... ..
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~---~~-- 945 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDF---VS-- 945 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc---cc--
Confidence 99999877 47775 343321 11 11122234556677889999998877655444421100 00
Q ss_pred cCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHHHHHHHHHHHHH-HHhh-c---ccccccCch
Q 002832 749 SLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLI-AVYA-N---WSFAAIEGV 823 (875)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~-~---~~~~~~~~~ 823 (875)
.+ ...++..+.+.++...++..++. +...+++|+|......|..+.+. ++..++ ..+. . .+.......
T Consensus 946 --~g-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~wt~~~~~~~~~S~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1057)
T TIGR01652 946 --SG-SLDDFSSVGVIVFTALVVIVNLK-IALEINRWNWISLITIWGSILVW---LIFVIVYSSIFPSPAFYKAAPRVMG 1018 (1057)
T ss_pred --CC-cccchhhHHHHHHHHHHHHHHHH-HHHHHhHhHHHHHHHHHHHHHHH---HHHHHHHHhhcccccHHHHHHHHHc
Confidence 01 11112234555555554444442 23345556554322222211111 111111 1010 0 001111122
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchh
Q 002832 824 GWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWD 859 (875)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~ 859 (875)
++.+|+.+++..++.++++.++|+++|.++|...+.
T Consensus 1019 s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~ 1054 (1057)
T TIGR01652 1019 TFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDI 1054 (1057)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 355667777788888889999999999998855443
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-99 Score=882.21 Aligned_cols=546 Identities=24% Similarity=0.361 Sum_probs=450.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhCCC--CCCch--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhccCC-cEE
Q 002832 67 GFMWNPLSWVMEAAAIMAIALANGGG--KPPDW--QDFVGIVTLLLINSTISFIE----ENNAGNAAAALMASLAP-KSK 137 (875)
Q Consensus 67 ~~~~~~~~~~l~~~~il~~~~~~~~~--~~~~~--~~~~~ii~~i~~~~~~~~~~----e~~~~~~~~~l~~~~~~-~~~ 137 (875)
.+++||+.|+++++++++++++.... ....| .+.+.|.++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46789999999999999998864211 11122 44666667777777777666 78999999999998886 776
Q ss_pred -EEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCC---CceeecceeccCceeE
Q 002832 138 -VLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEA 213 (875)
Q Consensus 138 -V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~ 213 (875)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|++| +.+|+||.+.+|++++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7899999999999999999999999999999999999986 8999999999999999999 8899999999999999
Q ss_pred EEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCc
Q 002832 214 VVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIA 292 (875)
Q Consensus 214 ~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~ 292 (875)
+|+++|.+|++||+.++++++ .+++|+|.....+...+.. +++..++ ++..+ ....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l~~~~-~~~~~-~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFLVVIL-TMYPL-AKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHHHHHH-HHHHH-HhhccHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999987 5789998766555332211 1111111 11111 111233345566778888999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccc
Q 002832 293 MPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV 372 (875)
Q Consensus 293 Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~ 372 (875)
||..++++.+.|++||+|+|+++|+++++|++|++|++|||||||||+|++.+.+.. .. .+.+.++++..+..++.
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~~~- 339 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYESSI- 339 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHhcC-
Confidence 999999999999999999999999999999999999999999999999877665532 22 24555667777666654
Q ss_pred cccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCCh-HHHHHHHHHH
Q 002832 373 ENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS-EIERRVHAII 451 (875)
Q Consensus 373 ~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~~~ 451 (875)
.+.||++.|++.++.+... .......+++||++++|+|++.+ +|+ .+.||+||.++++|.... ..+.++++..
T Consensus 340 ~s~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 340 ADDTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred CCCChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 3568999999887542210 00111235689999999999864 243 456999999999997421 1233466677
Q ss_pred HHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCC
Q 002832 452 DKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531 (875)
Q Consensus 452 ~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi 531 (875)
++++++|+|+++++. |++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||
T Consensus 414 ~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 889999999999874 3489999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 532 GTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 4 3799999999999999999999999999999999999999999999999
Q ss_pred ccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL 669 (875)
Q Consensus 612 gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 669 (875)
|||+|||+||+||+||||++|++++++||++|.|++|++.|+++.|++..+..+.+.+
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999997766554433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-96 Score=853.59 Aligned_cols=536 Identities=25% Similarity=0.333 Sum_probs=447.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhCC----CC---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-cEEE
Q 002832 67 GFMWNPLSWVMEAAAIMAIALANGG----GK---PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAP-KSKV 138 (875)
Q Consensus 67 ~~~~~~~~~~l~~~~il~~~~~~~~----~~---~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 138 (875)
.+|+||+.++++++++++++++... +. ...|...+.+++.+++..+++.++|+|+++.+++|+++.++ +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5789999999999999999886321 11 11233334444555667778889999999999999998875 6999
Q ss_pred EECCe-EEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCc---eeecceeccCceeEE
Q 002832 139 LRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDS---VYSGSTCKQGEIEAV 214 (875)
Q Consensus 139 ~rdg~-~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~~~ 214 (875)
+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|++|+. +|+||.|.+|+++++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 8999999999999999999999999999999984 899999999999999999988 999999999999999
Q ss_pred EEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCch
Q 002832 215 VIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAM 293 (875)
Q Consensus 215 V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L 293 (875)
|+++|.+|.+||+.++++++ .+++|+|...+.+..++..++++.++..+.+.++ .+.. ..+...+++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 99999999999999999987 6689999887776554432222222211111111 1222 367778899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhcccc
Q 002832 294 PTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVE 373 (875)
Q Consensus 294 p~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 373 (875)
+..++++...|+.||+|+|+++|+++++|++|++|++|||||||||+|+|.+.+++ .. .+.++++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999998754 22 3566777777777766544
Q ss_pred ccChHHHHHHHhcCCh---HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCC-hHHHHHHHH
Q 002832 374 NQDAIDAAIVGMLADP---KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVHA 449 (875)
Q Consensus 374 ~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~ 449 (875)
.||.++++++++.+. ......++..+.+||++.++++++.+ +| ..+.||++|.+++.|... .+.++++++
T Consensus 342 -~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 -ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred -CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 469999998875431 11111245677899999988887643 34 468999999999999542 233567788
Q ss_pred HHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 002832 450 IIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (875)
Q Consensus 450 ~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (875)
..++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 889999999999999974 3899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 530 GMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 530 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
||. ++|||++||||.++|+.+|++|++|+|||||+||+|||++|||||||
T Consensus 483 GId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 994 27999999999999999999999999999999999999999999999
Q ss_pred cCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (875)
Q Consensus 610 g~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 658 (875)
|+|||+|||+||+||+||||++|++++++||++.-.--....|+++.-+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999998443444667765444
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-93 Score=883.18 Aligned_cols=790 Identities=16% Similarity=0.172 Sum_probs=565.3
Q ss_pred HhcCCCccccccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 47 TIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAG 122 (875)
Q Consensus 47 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~ 122 (875)
.+|..|.+...|++.| +.+++||..+.++++++.++++++...... ..+...+.+++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--GRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688999999998865 578899999999999999999987643221 2345567777778888899999999998
Q ss_pred HHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCC----eeeeccccCCCCeeeecCCC-
Q 002832 123 NAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG- 197 (875)
Q Consensus 123 ~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~----l~VdeS~LTGEs~pv~K~~~- 197 (875)
++.++. ++.+++|+|+|+++++++++|+|||+|++++||+||||+++++++. ++||||+|||||.|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 887654 4578999999999999999999999999999999999999998433 68999999999999999642
Q ss_pred --------------------------------------------CceeecceeccC-ceeEEEEEecchhhhhhhhhhhc
Q 002832 198 --------------------------------------------DSVYSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 232 (875)
Q Consensus 198 --------------------------------------------~~v~~Gt~v~~G-~~~~~V~~tG~~T~~g~i~~~~~ 232 (875)
+.+++||.+.+. .+.|+|++||++|+..+ ...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~---N~~ 316 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML---NNS 316 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh---cCC
Confidence 235566666655 59999999999997432 222
Q ss_pred c-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhccc-C-----Cc--------------------hhh---HHH
Q 002832 233 S-TNQQGHFQKVLTAIGNFCICSIAVGMIVEIIV--MYPIQH-R-----KY--------------------RPG---IDN 280 (875)
Q Consensus 233 ~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~-~-----~~--------------------~~~---~~~ 280 (875)
. ..+.+++++.+|++..+++++.++.+++..+. .|.... . .| ... +..
T Consensus 317 ~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 396 (1178)
T PLN03190 317 GAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLM 396 (1178)
T ss_pred CCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHH
Confidence 2 25789999999999776544433332222222 111100 0 00 011 222
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHhcC----------CccccchhhhhccCceEEEecccCccccCcccceeeeE
Q 002832 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI 350 (875)
Q Consensus 281 ~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~----------ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~ 350 (875)
.++++...||++|+++++++....+.+|.+++ +.+|+.+..|+||+|++||+|||||||+|+|+++++.+
T Consensus 397 ~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i 476 (1178)
T PLN03190 397 SVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASI 476 (1178)
T ss_pred HHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEE
Confidence 34566689999999999999988788887755 78999999999999999999999999999999999876
Q ss_pred Ee--ccC-----------------C----------C------------C-h-----HHHHHHHHHhccc-----------
Q 002832 351 EI--FAK-----------------G----------V------------D-A-----DAVVLMAARASRV----------- 372 (875)
Q Consensus 351 ~~--~~~-----------------~----------~------------~-~-----~~~l~~~~~~~~~----------- 372 (875)
.. ++. + . + + .+++.+.+.|+..
T Consensus 477 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~ 556 (1178)
T PLN03190 477 WGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDP 556 (1178)
T ss_pred CCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCc
Confidence 21 100 0 0 0 0 1233444444321
Q ss_pred -------cccChHHHHHHHhcCCh----------------HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCc
Q 002832 373 -------ENQDAIDAAIVGMLADP----------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGA 429 (875)
Q Consensus 373 -------~~~~~~~~ai~~~~~~~----------------~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa 429 (875)
...+|.|.|++..+.+. ...+..|+.++.+||+|+|||||+++++++|++++++|||
T Consensus 557 ~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA 636 (1178)
T PLN03190 557 TVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGA 636 (1178)
T ss_pred cccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecC
Confidence 12379999998875321 1235678999999999999999999998888899999999
Q ss_pred HHHHHHhccCC--hHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc-------------------------CCCCCCee
Q 002832 430 PEQILNLVRNK--SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-------------------------ESSGGPWQ 482 (875)
Q Consensus 430 ~e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~-------------------------~~~e~~l~ 482 (875)
||.|+++|... .+.++++.+.+++++++|+|||++|||.+++.+. +..|+||+
T Consensus 637 ~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~ 716 (1178)
T PLN03190 637 DTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLT 716 (1178)
T ss_pred cHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcE
Confidence 99999999753 3457788899999999999999999999965321 24689999
Q ss_pred EEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-----------------------
Q 002832 483 FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS----------------------- 539 (875)
Q Consensus 483 ~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~----------------------- 539 (875)
++|+++++||||++++++|++|+++||++||+|||+++||.+||++|||.++.....
T Consensus 717 ~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~ 796 (1178)
T PLN03190 717 ILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKK 796 (1178)
T ss_pred EEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhh
Confidence 999999999999999999999999999999999999999999999999975432111
Q ss_pred ------------------------ccccccccccCC---cccHHHHhhhCc--EEEEeCHHHHHHHHHHHhhC-CCEEEE
Q 002832 540 ------------------------ALLGQNKDESIV---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGM 589 (875)
Q Consensus 540 ------------------------~~~~~~~~~~~~---~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~-g~~Vam 589 (875)
+++|.+++..++ .+.+.++..+++ ||||++|+||+++|+.+|++ +++|+|
T Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtla 876 (1178)
T PLN03190 797 LTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLA 876 (1178)
T ss_pred ccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEE
Confidence 122222221111 123455566666 79999999999999999997 589999
Q ss_pred EcCCccCHHHHhhCCceEEe-c-CccHHHhhccCEEecCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 590 TGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVLGFML 666 (875)
Q Consensus 590 ~GDG~NDapALk~AdVGIam-g-~gtd~ak~aADivL~~~~~~~i~~~i~-~gR~~~~~i~~~i~~~l~~ni~~~~~~~~ 666 (875)
+|||+||+||||+|||||++ | +|.++++ |||+.+.+ |..+.+++. +||+.|+|+.+.+.|.+++|+..++..++
T Consensus 877 IGDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~ 953 (1178)
T PLN03190 877 IGDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFW 953 (1178)
T ss_pred ECCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987 4 6776665 99999965 777887774 79999999999999999999998888888
Q ss_pred HHHhhcCC----cCHHHHHHHHHhhcc-cccccc-CCCCCCCC------------CCCchhhHHHHHHHHHHHHHHHHHH
Q 002832 667 LALIWKFD----FPPFMVLIIAILNDG-TIMTIS-KDRVKPSP------------LPDSWKLAEIFTTGVILGGYLAMMT 728 (875)
Q Consensus 667 ~~~~~~~~----~~~~~~l~~~~~~~~-~~~~l~-~~~~~~~~------------~~~~~~~~~~~~~~~~~g~~~~~~~ 728 (875)
+.++.++. +.++.+.+.|++... ++++++ +|+.-|+. +.......+.|+.|++.|++++++.
T Consensus 954 f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~ii 1033 (1178)
T PLN03190 954 YVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVV 1033 (1178)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHH
Confidence 77776664 344555555555444 456663 66553321 1112223456777889999999887
Q ss_pred HHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHHHHHHHH-HHH
Q 002832 729 VIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQL-IAT 807 (875)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~-~~~ 807 (875)
|++.++.+.... .+ +. ....++++..++..++. +...+++|.|......|..+.+.+... +..
T Consensus 1034 ff~~~~~~~~~~----~~-----~~------~~~~~~~~~~v~~vnl~-i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~ 1097 (1178)
T PLN03190 1034 FFVPLFAYWAST----ID-----GS------SIGDLWTLAVVILVNLH-LAMDIIRWNWITHAAIWGSIVATFICVIVID 1097 (1178)
T ss_pred HHHHHHHhcCCC----cC-----ce------eEhHhhhhHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 765554442110 01 00 12233333444444442 223445565543322222221111110 000
Q ss_pred HHHHhhc-ccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHhh
Q 002832 808 LIAVYAN-WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQ 864 (875)
Q Consensus 808 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~ 864 (875)
.++.... +.+. ....++.+|+.+++..++.++++.++|++.|.++|...+..++.+
T Consensus 1098 ~~~~~~~~~~~~-~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~ 1154 (1178)
T PLN03190 1098 AIPTLPGYWAIF-HIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAE 1154 (1178)
T ss_pred hcccchhHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 0010000 1111 111234567777888888889999999999999997766555433
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-93 Score=808.22 Aligned_cols=656 Identities=23% Similarity=0.325 Sum_probs=503.4
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHH
Q 002832 25 EVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIV 104 (875)
Q Consensus 25 ~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii 104 (875)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..||| +++.+.+++-|... .+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHHH
Confidence 3444444557899999999999999999999999999999999999999 67776666655542 2444455666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEec-CCccccceEEEecCCeeeecc
Q 002832 105 TLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKL-GDIIPADARLLEGDPLKIDQS 183 (875)
Q Consensus 105 ~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~-G~~vPaD~~ll~g~~l~VdeS 183 (875)
++.+.+...+.+|.++.++.++++. ..+..|+|+|||.|++|+++|||||||+++.+ |-..|||++|++|++ -||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv-~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMV-KFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeecc
Confidence 6667788889999999998887764 34568999999999999999999999999998 889999999999997 59999
Q ss_pred ccCCCCeeeecCCC-------------------Cceeecceecc------CceeEEEEEecchhhhhhhhhhhcccCCCC
Q 002832 184 ALTGESLPVTKGPG-------------------DSVYSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQQG 238 (875)
Q Consensus 184 ~LTGEs~pv~K~~~-------------------~~v~~Gt~v~~------G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 238 (875)
+|||||.|+.|.|- +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.++ +.
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-PV 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-Cc
Confidence 99999999999872 46999999875 669999999999999999888776653 33
Q ss_pred cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCcccc
Q 002832 239 HFQKVLTAIGNFC-ICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKR 317 (875)
Q Consensus 239 ~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~ 317 (875)
+++-..+.+..+. +..+++..++..++.+...+.+....+.+.+.++...+|+|||.+++++..++.+||.|+||+|.+
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 4444444332111 111222222223333445567788889999999999999999999999999999999999999999
Q ss_pred chhhhhccCceEEEecccCccccCcccceeeeEEecc--CC----------------------CCh-HHHHHHHHHhccc
Q 002832 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA--KG----------------------VDA-DAVVLMAARASRV 372 (875)
Q Consensus 318 ~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~--~~----------------------~~~-~~~l~~~~~~~~~ 372 (875)
++.+...|++|++|||||||||++.+.+..+.....+ .+ ..+ ..+....+.|...
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 9999999999999999999999999998654320000 00 001 1222333333321
Q ss_pred ------cccChHHHHHHHhcC------------------------ChHH-----H----hhcccEEEEecCCCCCceEEE
Q 002832 373 ------ENQDAIDAAIVGMLA------------------------DPKE-----A----RANIQEVHFLPFNPTDKRTAL 413 (875)
Q Consensus 373 ------~~~~~~~~ai~~~~~------------------------~~~~-----~----~~~~~~l~~~pf~~~~k~~sv 413 (875)
..+||+|..+.+..+ ++.. . ...+..++.+||+|.-+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 135676544332110 0100 0 014678899999999999999
Q ss_pred EEEcC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCC--------CcCCCCCCeeEE
Q 002832 414 TYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG--------RKESSGGPWQFI 484 (875)
Q Consensus 414 ~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~--------~~~~~e~~l~~l 484 (875)
++.++ +.+.+.|+|||||.|.+.|+. +.+++++.+.++.|+.+|+||+|+|+|+++.. .++..|.||+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99864 567889999999999999985 46788999999999999999999999999765 367899999999
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcc------------------------
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA------------------------ 540 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~------------------------ 540 (875)
|++.|++++|++++.+|++|++|+||++|+||||..||..+||+||+.........
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 99999999999999999999999999999999999999999999999653210000
Q ss_pred -----------------------------cccccccc--cCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEE
Q 002832 541 -----------------------------LLGQNKDE--SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (875)
Q Consensus 541 -----------------------------~~~~~~~~--~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam 589 (875)
+.|+..+- ....+.+++++.+.+|||||+|+||.++|+.||+-|+.|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 00000000 00122356677889999999999999999999999999999
Q ss_pred EcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 590 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL 669 (875)
Q Consensus 590 ~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 669 (875)
||||+|||.|||+||||||++++. |.-||.+.-.-.+++++++.|++||...-.--...+|...+.+...+.. .++
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv--~~L 933 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISV--VFL 933 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhh--hee
Confidence 999999999999999999999644 4457888888889999999999999986665555556555554332221 112
Q ss_pred h-hcCCcCHHHHHHHHHhhccc-ccccc
Q 002832 670 I-WKFDFPPFMVLIIAILNDGT-IMTIS 695 (875)
Q Consensus 670 ~-~~~~~~~~~~l~~~~~~~~~-~~~l~ 695 (875)
. -+..++-+|.+++.++-..+ +..++
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~ 961 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMS 961 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHc
Confidence 2 24467788888888776544 33443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-91 Score=808.30 Aligned_cols=539 Identities=24% Similarity=0.319 Sum_probs=448.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhC---CC---CCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc-E
Q 002832 67 GFMWNPLSWVMEAAAIMAIALANG---GG---KPPDWQDF---VGIVTLLLINSTISFIEENNAGNAAAALMASLAPK-S 136 (875)
Q Consensus 67 ~~~~~~~~~~l~~~~il~~~~~~~---~~---~~~~~~~~---~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~ 136 (875)
.||.||+.++++++++++++++.. .+ ....|+++ +++++.+++..+++.++|+|+++.+++|+++.+++ +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 578999999999999999988642 11 11236664 33334456778888899999999999999988774 8
Q ss_pred EEEE-CCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCc---eeecceeccCcee
Q 002832 137 KVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDS---VYSGSTCKQGEIE 212 (875)
Q Consensus 137 ~V~r-dg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~ 212 (875)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ ..||||+|||||.|+.|++|+. +|+||.+.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 899999999999999999999999999999999997 5899999999999999999874 9999999999999
Q ss_pred EEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCC
Q 002832 213 AVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPI 291 (875)
Q Consensus 213 ~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~ 291 (875)
++|+++|.+|++||+.++++++ .+++|+|...+.+..++.+++.+..+. +..+... ......+...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~-~~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAY-GGNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHh-cChhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 568999988777765543222221111 1111111 11123466678899999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhcc
Q 002832 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASR 371 (875)
Q Consensus 292 ~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 371 (875)
+|+...+.....|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.+++ .. .+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHhcC
Confidence 8877777777789999999999999999999999999999999999999999998754 22 35567777877777665
Q ss_pred ccccChHHHHHHHhcCChHH--HhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCC-hHHHHHHH
Q 002832 372 VENQDAIDAAIVGMLADPKE--ARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVH 448 (875)
Q Consensus 372 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~ 448 (875)
. ++||.+++++.++.+... ....++..+..||++.++++++.+. +| ..+.||+||.+++.|... ...+++++
T Consensus 341 ~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 A-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred C-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 4 457999999876542110 0112345678999999877765433 44 367899999999888532 22345677
Q ss_pred HHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH
Q 002832 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (875)
Q Consensus 449 ~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 528 (875)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+||||+.+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88889999999999999853 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 529 LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 529 lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
+|+. +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9994 3699999999999999999999999999999999999999999999
Q ss_pred ecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660 (875)
Q Consensus 609 mg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~ 660 (875)
|++|+++||++||++++||||++|++++++||+++-+......|+++.+++-
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~ 584 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAK 584 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHH
Confidence 9999999999999999999999999999999999999999999999877763
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-88 Score=787.55 Aligned_cols=504 Identities=28% Similarity=0.400 Sum_probs=434.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEE-CCeEEEEecCCcCCCcEEEEecCCccccceEEEecC
Q 002832 98 QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD 176 (875)
Q Consensus 98 ~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~ 176 (875)
.+++.+++++++..+++.+-..|+++++++|.++.|+++++++ ||++++||.+||+|||+|.++|||+||+||+|++|+
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~ 254 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS 254 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc
Confidence 5566677777788888888888889999999999999998776 566999999999999999999999999999999999
Q ss_pred CeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHH
Q 002832 177 PLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSI 255 (875)
Q Consensus 177 ~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 255 (875)
+ .||||+|||||.|+.|.+||.|++||.+.+|..+..|+++|.+|.++||.++++++ .+++|.|+..++++.++....
T Consensus 255 s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~v 333 (713)
T COG2217 255 S-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333 (713)
T ss_pred E-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHH
Confidence 8 79999999999999999999999999999999999999999999999999999998 778999999999999887644
Q ss_pred HHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEeccc
Q 002832 256 AVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335 (875)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKT 335 (875)
++..++.+++++.....+|..++...+++++++|||+|.+++|++...|..+.+|+|+++|+.+++|+++++|+++||||
T Consensus 334 l~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKT 413 (713)
T COG2217 334 LVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKT 413 (713)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCC
Confidence 44444444444444446788899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEE
Q 002832 336 GTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTY 415 (875)
Q Consensus 336 GTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~ 415 (875)
||||+|+++|.++. ... + ++++++.+++..+.. ++||+.+|++++..+.. ....+..+.+| .+.-.+
T Consensus 414 GTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~-S~HPiA~AIv~~a~~~~--~~~~~~~~~i~---G~Gv~~--- 480 (713)
T COG2217 414 GTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQH-SEHPLAKAIVKAAAERG--LPDVEDFEEIP---GRGVEA--- 480 (713)
T ss_pred CCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhc-CCChHHHHHHHHHHhcC--CCCccceeeec---cCcEEE---
Confidence 99999999998864 332 3 778888888776554 45799999998654321 11122233333 222222
Q ss_pred EcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCC
Q 002832 416 IDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495 (875)
Q Consensus 416 ~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~ 495 (875)
.-+|+.+ ..|+++.+.+.-... .. ..+..+.+.++|..++.++.+. +++|+++++|++||
T Consensus 481 -~v~g~~v--~vG~~~~~~~~~~~~---~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~ 540 (713)
T COG2217 481 -EVDGERV--LVGNARLLGEEGIDL---PL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRP 540 (713)
T ss_pred -EECCEEE--EEcCHHHHhhcCCCc---cc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCCh
Confidence 1256544 459999886532111 11 4556778889999999999876 89999999999999
Q ss_pred ChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHH
Q 002832 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYE 575 (875)
Q Consensus 496 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~ 575 (875)
|++++|++||+.|++++|+||||..+|.++|+++||. +++|.+.||||.+
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~~ 590 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKAE 590 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHHH
Confidence 9999999999999999999999999999999999994 3799999999999
Q ss_pred HHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (875)
Q Consensus 576 iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 655 (875)
+|+.||++|++|+|+|||+||+|||++||||||||+|||+|+|+||++|++||++.++++++.+|+++++||+|+.|++.
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002832 656 ITIRIVLGFM 665 (875)
Q Consensus 656 ~ni~~~~~~~ 665 (875)
+|...+....
T Consensus 671 yn~~~iplA~ 680 (713)
T COG2217 671 YNAIAIPLAA 680 (713)
T ss_pred HHHHHHHHHH
Confidence 9987665443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-82 Score=760.71 Aligned_cols=500 Identities=26% Similarity=0.355 Sum_probs=434.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEec
Q 002832 96 DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (875)
Q Consensus 96 ~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g 175 (875)
.|.+++.++++++++..++.++++|+++.+++|+++.+++++|+|||++++|++++|+|||+|.+++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67788888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002832 176 DPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (875)
Q Consensus 176 ~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (875)
+. .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ .+++|+|+.++++++++...
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 85 89999999999999999999999999999999999999999999999999999987 67899999999999987655
Q ss_pred HHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecc
Q 002832 255 IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334 (875)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 334 (875)
+++..++.+++++.....+|..++...+++++++|||+|.+++++++..+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 54444444444334445667788899999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEE-
Q 002832 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTAL- 413 (875)
Q Consensus 335 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv- 413 (875)
|||||+|+|+|.++. .. .+.++++++.+++..+ ..++||+++|+++++.+. +. .+||.++.+.+.-
T Consensus 444 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e-~~s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIH--PA-TGISESELLALAAAVE-QGSTHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHh-cCCCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 999999999998754 22 2456777777776543 345789999998875321 11 2466666655432
Q ss_pred EEE-cCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCC
Q 002832 414 TYI-DSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDP 492 (875)
Q Consensus 414 ~~~-~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~ 492 (875)
.++ ..+|+.+. .|+++.+.+ ..+++.+.++.+..+|+|++++|++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~~~--ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGERVL--ICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEEEE--Eecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 122 23565544 489998754 11344556678899999999999854 89999999999
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHH
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 572 (875)
+|||++++|++||++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 367889999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002832 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (875)
Q Consensus 573 K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 652 (875)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+|+++++||++++++++..+++++++||++++|||+|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002832 653 AVSITIRIVLG 663 (875)
Q Consensus 653 ~l~~ni~~~~~ 663 (875)
++.+|+..+..
T Consensus 697 a~~~n~~~i~~ 707 (741)
T PRK11033 697 ALGLKAIFLVT 707 (741)
T ss_pred HHHHHHHHHHH
Confidence 99999765443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-83 Score=727.51 Aligned_cols=533 Identities=25% Similarity=0.347 Sum_probs=444.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCe-EEEEecCCcCCCcEEEEecCCccccceEEEecCCee
Q 002832 101 VGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLK 179 (875)
Q Consensus 101 ~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~ 179 (875)
..++.++.+..+++...+.|+..++..|+.+.|.++.++.+|+ +++||.+.|++||+|.+.||++||+||++++|++ +
T Consensus 345 ~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~ 423 (951)
T KOG0207|consen 345 PMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-E 423 (951)
T ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-e
Confidence 4444566677777777778888899999999999999999996 8999999999999999999999999999999997 8
Q ss_pred eeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHH
Q 002832 180 IDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVG 258 (875)
Q Consensus 180 VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~ 258 (875)
||||++|||++||.|++|+.|.+||.+.+|.....++++|.+|.++||.++++++ ..++|.|+.+|+++.++...+++.
T Consensus 424 VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~l 503 (951)
T KOG0207|consen 424 VDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVL 503 (951)
T ss_pred echhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHH
Confidence 9999999999999999999999999999999999999999999999999999998 678999999999999875544444
Q ss_pred HHHHHHHhhhccc----------CCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCce
Q 002832 259 MIVEIIVMYPIQH----------RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMD 328 (875)
Q Consensus 259 ~~~~~~~~~~~~~----------~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~ 328 (875)
.+..+++|..+.. ..+..++...+++++++|||+|.++.|++...|...-+++|+++|..+++|.+.+++
T Consensus 504 S~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~ 583 (951)
T KOG0207|consen 504 SLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVK 583 (951)
T ss_pred HHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCC
Confidence 3333333332222 234456677788899999999999999999999999999999999999999999999
Q ss_pred EEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEE-EEecCCCC
Q 002832 329 VLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEV-HFLPFNPT 407 (875)
Q Consensus 329 ~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l-~~~pf~~~ 407 (875)
+++||||||||+|++.|.+.. ...+..+..+++.+++.. +....||+..|+++++.+.... .+...+ +.--|..+
T Consensus 584 tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~-Es~SeHPig~AIv~yak~~~~~-~~~~~~~~~~~~pg~ 659 (951)
T KOG0207|consen 584 TVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAM-ESGSEHPIGKAIVDYAKEKLVE-PNPEGVLSFEYFPGE 659 (951)
T ss_pred EEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHH-hcCCcCchHHHHHHHHHhcccc-cCccccceeecccCC
Confidence 999999999999999998865 343335566665555443 3355689999999997643311 111122 22122222
Q ss_pred CceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEe
Q 002832 408 DKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487 (875)
Q Consensus 408 ~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i 487 (875)
.....+. .+++. +.-|+-+.+.+.-. ...++++..+++....|..+.+++... +++|++
T Consensus 660 g~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv~ 718 (951)
T KOG0207|consen 660 GIYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG-------------QLVGVF 718 (951)
T ss_pred CcccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEEE
Confidence 2221111 23443 55699998876422 224457778888899999999999987 899999
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
.++|++|||+..+|+.||+.||+++|+||||..+|+++|+++|+. +|||.
T Consensus 719 ~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~ae 768 (951)
T KOG0207|consen 719 ALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NVYAE 768 (951)
T ss_pred EeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEec
Confidence 999999999999999999999999999999999999999999974 48999
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHH
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~ 647 (875)
+.|+||.++||.+|++|+.|+|+|||+||+|||.+|||||+||.|+|+|.|+||+||+.+|+..++.+|+.+|++++|||
T Consensus 769 v~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk 848 (951)
T KOG0207|consen 769 VLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIK 848 (951)
T ss_pred cCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHhhcc
Q 002832 648 NYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDG 689 (875)
Q Consensus 648 ~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 689 (875)
.|+.|++.+|+..++...+.++.+++.++|+.--....++.+
T Consensus 849 ~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSv 890 (951)
T KOG0207|consen 849 LNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSV 890 (951)
T ss_pred HHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhH
Confidence 999999999998887777776667777888765554444444
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-79 Score=713.59 Aligned_cols=473 Identities=36% Similarity=0.544 Sum_probs=413.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--ccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeec
Q 002832 105 TLLLINSTISFIEENNAGNAAAALMA--SLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182 (875)
Q Consensus 105 ~~i~~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~Vde 182 (875)
++++++.+++.++++++++..+++.+ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||++++|++ .|||
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vde 81 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDE 81 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEc
Confidence 45677888999999999999999988 788899999999 9999999999999999999999999999999975 8999
Q ss_pred cccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHH-HHHHHHHHHHHH
Q 002832 183 SALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIG-NFCICSIAVGMI 260 (875)
Q Consensus 183 S~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~-~~~~~~~~~~~~ 260 (875)
|+|||||.|+.|.+|+.+++||.+.+|+.++.|+++|.+|..+++..++++. ..++++++..+++. .+++.++++..+
T Consensus 82 s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 82 SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999877 44788899999998 454433332222
Q ss_pred HHHHHhhhcccC--CchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCcc
Q 002832 261 VEIIVMYPIQHR--KYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTL 338 (875)
Q Consensus 261 ~~~~~~~~~~~~--~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTL 338 (875)
+.++.++..... +|..++..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++|++||||||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTL 241 (499)
T TIGR01494 162 AVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTL 241 (499)
T ss_pred HHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCcc
Confidence 222222221112 367788999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEEEcC
Q 002832 339 TLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDS 418 (875)
Q Consensus 339 T~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~ 418 (875)
|+|+|+|.++.. .. + ....+||++.|++++... +.++..||++.+++|++++...
T Consensus 242 T~~~~~v~~~~~--~~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~ 296 (499)
T TIGR01494 242 TKNEMSFKKVSV--LG-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRGP 296 (499)
T ss_pred ccCceEEEEEEe--cC-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEecC
Confidence 999999988652 11 0 124568999999887542 1235679999999999888753
Q ss_pred CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChH
Q 002832 419 EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSA 498 (875)
Q Consensus 419 ~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~ 498 (875)
++ .++||+++.+.+.|.. +.+..+.++++|+|++++|++. +++|++.++|++|++++
T Consensus 297 ~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~~ 353 (499)
T TIGR01494 297 DG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDAK 353 (499)
T ss_pred Cc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhHH
Confidence 33 4689999999998752 2334456788999999999876 79999999999999999
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHH
Q 002832 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (875)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 578 (875)
++|+.|+++|++++|+|||++.+|..+|+++|+ ++|++|+||.++|+
T Consensus 354 ~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v~ 400 (499)
T TIGR01494 354 ETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALVE 400 (499)
T ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHHH
Confidence 999999999999999999999999999999986 68899999999999
Q ss_pred HHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 579 RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (875)
Q Consensus 579 ~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 658 (875)
.+|+.|+.|+|+|||+||+|||++|||||+|+ |+++||++|+++++..++.++++||++++++++++.|.+++|+
T Consensus 401 ~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~ 475 (499)
T TIGR01494 401 ALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNL 475 (499)
T ss_pred HHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 7999999999999999999999999999999999999999998
Q ss_pred HHHHHHH
Q 002832 659 RIVLGFM 665 (875)
Q Consensus 659 ~~~~~~~ 665 (875)
..++..+
T Consensus 476 ~~~~~a~ 482 (499)
T TIGR01494 476 ILIPLAA 482 (499)
T ss_pred HHHHHHH
Confidence 8655443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-78 Score=706.64 Aligned_cols=499 Identities=29% Similarity=0.416 Sum_probs=424.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCC
Q 002832 76 VMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPG 155 (875)
Q Consensus 76 ~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~G 155 (875)
++.++++++++.+ +|.++..++++++++..++.++++|+++.+++|.+..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4456667777763 789999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-
Q 002832 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (875)
Q Consensus 156 Div~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (875)
|+|.+++||+|||||++++|+. .||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+||+.++++++
T Consensus 77 Div~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 9999999999999999999986 79999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCc
Q 002832 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (875)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~il 314 (875)
.+++++|+.++++++++...++...++.+++++... .+..++..++++++++|||+||+++++++..+..+++|+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 578899999999988766554443333333333222 233377788899999999999999999999999999999999
Q ss_pred cccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhh
Q 002832 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394 (875)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 394 (875)
+|+++++|++|++|++|||||||||+|+|+|.++. +.+++.+++.. +..+.||++.|+++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~-e~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAA-EQASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHH-hccCCCcHHHHHHHHHHhcC----
Confidence 99999999999999999999999999999998753 12566666543 34567899999988764321
Q ss_pred cccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc
Q 002832 395 NIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK 474 (875)
Q Consensus 395 ~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~ 474 (875)
.....+.+|. +. ... ..+|+.+ ..|+++.+.+... ..+..+|.+++.++.+.
T Consensus 300 ~~~~~~~~~g---~g-i~~---~~~g~~~--~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG---EG-VRA---VVDGGEV--RIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC---Ce-EEE---EECCeEE--EEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC------
Confidence 2222233321 11 111 1245544 3588876643210 14567888888887643
Q ss_pred CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCC-cEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcc
Q 002832 475 ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVAL 553 (875)
Q Consensus 475 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~ 553 (875)
.++|.+.++|++||+++++|++|+++|+ ++.|+|||+..+|.++++++|+.
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 8999999999999999999999999999 99999999999999999999984
Q ss_pred cHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhccCEEecCCChhHH
Q 002832 554 PVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 554 ~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~~~~~~~i 632 (875)
++|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| +|++.++++||+++++++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 258899999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 633 ISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663 (875)
Q Consensus 633 ~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~ 663 (875)
.+++++||++++|+++|+.|++.+|+..+..
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999775543
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-77 Score=705.07 Aligned_cols=517 Identities=26% Similarity=0.383 Sum_probs=432.1
Q ss_pred HHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECC-eEEEEecCCcCCC
Q 002832 77 MEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDG-KWMEEDAAILVPG 155 (875)
Q Consensus 77 l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg-~~~~I~~~~Lv~G 155 (875)
+.++++++++.+ .|.++..++++++++.++++++++|+++.+++|.+..+++++|+||| ++++|++++|+||
T Consensus 5 ~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~G 77 (556)
T TIGR01525 5 MALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVG 77 (556)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCC
Confidence 344555666653 78889999999999999999999999999999999999999999996 9999999999999
Q ss_pred cEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-
Q 002832 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (875)
Q Consensus 156 Div~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (875)
|+|.+++||+|||||+|++|+. .||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+|++.++++++
T Consensus 78 Div~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 156 (556)
T TIGR01525 78 DIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQ 156 (556)
T ss_pred CEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHh
Confidence 9999999999999999999985 89999999999999999999999999999999999999999999999999998876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCc
Q 002832 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (875)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~il 314 (875)
.+++++++.++++++++...+++..++.+++++.. ... ..+..++++++++|||+||++++++++.+.++|+++|++
T Consensus 157 ~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~-~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gil 233 (556)
T TIGR01525 157 SSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL-GAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGIL 233 (556)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCce
Confidence 67899999999998886554443333333333222 222 678889999999999999999999999999999999999
Q ss_pred cccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCC--hHHHHHHHHHhccccccChHHHHHHHhcCChHHH
Q 002832 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD--ADAVVLMAARASRVENQDAIDAAIVGMLADPKEA 392 (875)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~ 392 (875)
+|+++++|++|++|++|||||||||+|+|+|.++. ... +.+ +++++.+++..+. ...||++.|+.+++.+....
T Consensus 234 vk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~--~~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 234 IKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVE--PLD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred ecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEE--ecC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998764 222 222 5667766665543 45689999999886432110
Q ss_pred hhccc-EEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCC
Q 002832 393 RANIQ-EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD 471 (875)
Q Consensus 393 ~~~~~-~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~ 471 (875)
... + ..+++| .+ ..... .+|. ..+..|+++.+ +. ... + ..+..+.++.++++|+|+++++.+.
T Consensus 310 ~~~-~~~~~~~~---~~-gi~~~---~~g~-~~~~lg~~~~~-~~-~~~-~-~~~~~~~~~~~~~~g~~~~~v~~~~--- 373 (556)
T TIGR01525 310 LPK-QEDVEEVP---GK-GVEAT---VDGQ-EEVRIGNPRLL-EL-AAE-P-ISASPDLLNEGESQGKTVVFVAVDG--- 373 (556)
T ss_pred ccc-ccCeeEec---CC-eEEEE---ECCe-eEEEEecHHHH-hh-cCC-C-chhhHHHHHHHhhCCcEEEEEEECC---
Confidence 000 1 122221 11 11111 1341 23456999876 21 111 1 1223455667889999999999754
Q ss_pred CCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccC
Q 002832 472 GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESI 550 (875)
Q Consensus 472 ~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~ 550 (875)
+++|.+.++|++|||++++|++|+++| +++.|+|||+..++.++++++|+.
T Consensus 374 ----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------ 425 (556)
T TIGR01525 374 ----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------ 425 (556)
T ss_pred ----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------
Confidence 899999999999999999999999999 999999999999999999999994
Q ss_pred CcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChh
Q 002832 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (875)
Q Consensus 551 ~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~ 630 (875)
++|+++.|++|.++++.+|+.|+.|+|+|||.||+||+++|||||++|++++.++++||+++.+++++
T Consensus 426 ------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~ 493 (556)
T TIGR01525 426 ------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLS 493 (556)
T ss_pred ------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHH
Confidence 26899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 664 (875)
Q Consensus 631 ~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~ 664 (875)
.+++++++||++++||++++.|++.+|+..+...
T Consensus 494 ~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a 527 (556)
T TIGR01525 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLA 527 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998865443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-77 Score=700.65 Aligned_cols=505 Identities=27% Similarity=0.405 Sum_probs=420.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEEC-CeEEEEecCCcCCCcEEEEecCCccccceEEEec
Q 002832 97 WQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (875)
Q Consensus 97 ~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g 175 (875)
|.+...++++++++.+++.+.++|+++.+++|.+..|++++++|+ |++++|+.++|+|||+|.+++||+|||||+|++|
T Consensus 54 ~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g 133 (562)
T TIGR01511 54 FDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEG 133 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEEC
Confidence 344445566667777888888889999999999999999999985 6779999999999999999999999999999999
Q ss_pred CCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002832 176 DPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (875)
Q Consensus 176 ~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (875)
++ .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+||+.++++++ .+++++|+..+++++++...
T Consensus 134 ~~-~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~ 212 (562)
T TIGR01511 134 ES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPV 212 (562)
T ss_pred ce-EEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 96 79999999999999999999999999999999999999999999999999999887 67899999999999887554
Q ss_pred HHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecc
Q 002832 255 IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334 (875)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 334 (875)
+++..++.++. | ..++...+++++++|||+|++++++++..+..+++|+|+++|+++++|+|+++|++||||
T Consensus 213 v~~~a~~~~~~-~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDK 284 (562)
T TIGR01511 213 VIAIALITFVI-W-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDK 284 (562)
T ss_pred HHHHHHHHHHH-H-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECC
Confidence 43333332222 2 247788999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEE
Q 002832 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALT 414 (875)
Q Consensus 335 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~ 414 (875)
|||||+|+|+|.++. .. .+.++++++.+++..+. .+.||+++|+++++.+...........+.+| . +.....
T Consensus 285 TGTLT~g~~~v~~i~--~~-~~~~~~~~l~~aa~~e~-~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~---g-~Gi~~~ 356 (562)
T TIGR01511 285 TGTLTQGKPTVTDVH--VF-GDRDRTELLALAAALEA-GSEHPLAKAIVSYAKEKGITLVEVSDFKAIP---G-IGVEGT 356 (562)
T ss_pred CCCCcCCCEEEEEEe--cC-CCCCHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCCcCCCCCeEEEC---C-ceEEEE
Confidence 999999999998754 22 24556777777765544 3467999999987643211111112222222 1 111111
Q ss_pred EEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCC
Q 002832 415 YIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPR 494 (875)
Q Consensus 415 ~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 494 (875)
.+|+. +..|+++.+.+.... +..+.++|.+++.++.+. +++|.+.++|++|
T Consensus 357 ---~~g~~--~~iG~~~~~~~~~~~-----------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l~ 407 (562)
T TIGR01511 357 ---VEGTK--IQLGNEKLLGENAIK-----------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQLR 407 (562)
T ss_pred ---ECCEE--EEEECHHHHHhCCCC-----------CChhhhCCCEEEEEEECC-------------EEEEEEEeccccc
Confidence 24543 456999987542111 112457899999988754 8999999999999
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHH
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKY 574 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~ 574 (875)
|+++++|++||+.|+++.|+|||+..+|.++++++|+. +|+++.|++|.
T Consensus 408 ~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K~ 456 (562)
T TIGR01511 408 PEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDKA 456 (562)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHHH
Confidence 99999999999999999999999999999999999982 47888999999
Q ss_pred HHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654 (875)
Q Consensus 575 ~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 654 (875)
++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++++++++.++.++++||+++++|++|+.|++
T Consensus 457 ~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~ 536 (562)
T TIGR01511 457 ALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAF 536 (562)
T ss_pred HHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCcCHH
Q 002832 655 SITIRIVLGFMLLALIWKFDFPPF 678 (875)
Q Consensus 655 ~~ni~~~~~~~~~~~~~~~~~~~~ 678 (875)
.+|+..+...++.++.+++.++|+
T Consensus 537 ~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 537 GYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHhhhhccccccCCC
Confidence 999887665555444455456654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-76 Score=721.01 Aligned_cols=522 Identities=25% Similarity=0.337 Sum_probs=432.7
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEec
Q 002832 97 WQD-FVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (875)
Q Consensus 97 ~~~-~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g 175 (875)
|++ +..++++++++.+++...+.|+.+.+++|.++.|++++|+|||++++|+.++|+|||+|.+++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 444 5666777788888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002832 176 DPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (875)
Q Consensus 176 ~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (875)
+. .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ ..++++|+..++++++++.+
T Consensus 365 ~~-~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 EA-WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred eE-EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 85 89999999999999999999999999999999999999999999999999999887 66889999999999876654
Q ss_pred HHHHHHHHHHHhhhccc-CCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEec
Q 002832 255 IAVGMIVEIIVMYPIQH-RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSD 333 (875)
Q Consensus 255 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 333 (875)
+++..++.+++++.... ..|...+...+++++++|||+|++++++++..+..+++|+|+++|+++++|+++++|++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 44333333333322211 12445677788999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEE
Q 002832 334 KTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTAL 413 (875)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv 413 (875)
||||||+|+|+|.+.. .. .+.++++++.+++..+. ...||+++|++++..+. ....+ .+|.....+ ++
T Consensus 524 KTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~~~--~~~~~~~g~-Gv 591 (834)
T PRK10671 524 KTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLPQV--NGFRTLRGL-GV 591 (834)
T ss_pred CCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCCCc--ccceEecce-EE
Confidence 9999999999998753 22 24566777777665543 45689999998765321 11111 112211111 11
Q ss_pred EEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCC
Q 002832 414 TYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPP 493 (875)
Q Consensus 414 ~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~l 493 (875)
... .+|+. +.+|+++.+.+.... .+.+.+.++.++++|.++++++++. +++|++.+.|++
T Consensus 592 ~~~-~~g~~--~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~ 651 (834)
T PRK10671 592 SGE-AEGHA--LLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPL 651 (834)
T ss_pred EEE-ECCEE--EEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcc
Confidence 111 24543 456999987553221 2345566778889999999999865 799999999999
Q ss_pred CCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHH
Q 002832 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHK 573 (875)
Q Consensus 494 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 573 (875)
||+++++|++|++.|+++.|+|||+..+|.++++++||. ++|+++.|++|
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K 701 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGK 701 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHH
Confidence 999999999999999999999999999999999999984 26899999999
Q ss_pred HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (875)
Q Consensus 574 ~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 653 (875)
.++++.+|++|+.|+|+|||.||+|||++||+||+||+|+|.++++||+++++++++.|..++++||++++||++|+.|+
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-hcCCcCHHHHH
Q 002832 654 VSITIRIVLGFMLLALI-WKFDFPPFMVL 681 (875)
Q Consensus 654 l~~ni~~~~~~~~~~~~-~~~~~~~~~~l 681 (875)
+.+|+..+...++.+.. +++.++|+.-.
T Consensus 782 ~~yn~~~i~~a~g~~~p~~g~~l~p~~a~ 810 (834)
T PRK10671 782 FIYNSLGIPIAAGILWPFTGTLLNPVVAG 810 (834)
T ss_pred HHHHHHHHHHHHhchhhhhhcccCHHHHH
Confidence 99998766544422221 23356776443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-79 Score=731.52 Aligned_cols=797 Identities=17% Similarity=0.207 Sum_probs=571.1
Q ss_pred HHHhcCCCccccccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002832 45 RLTIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120 (875)
Q Consensus 45 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~ 120 (875)
+..+|-.|.+...|++.+ +.+++||.++-+.+|++.++++++.. . +...|...+.+++++.++++.+.++++|
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~-~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPL-S--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcc-c--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999998754 68899999999999999999999862 2 3346677778888888899999999999
Q ss_pred HHHHHHHHhhccCCcEEEEECCe-EEEEecCCcCCCcEEEEecCCccccceEEEecCC----eeeeccccCCCCeeeecC
Q 002832 121 AGNAAAALMASLAPKSKVLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKG 195 (875)
Q Consensus 121 ~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~----l~VdeS~LTGEs~pv~K~ 195 (875)
+++....+ +..++.|.|++. +++..|+++++||+|.+..++.+|||.++++++. ++|++++|+||+..+.|.
T Consensus 105 R~~~D~~i---N~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEV---NNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHh---hcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 99877554 457899998544 8999999999999999999999999999998663 789999999999988774
Q ss_pred C-----------------------------------------------CCceeecceeccCc-eeEEEEEecchhhhhhh
Q 002832 196 P-----------------------------------------------GDSVYSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (875)
Q Consensus 196 ~-----------------------------------------------~~~v~~Gt~v~~G~-~~~~V~~tG~~T~~g~i 227 (875)
. .+++..|+.+.+.. +.++|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 2 12467788888765 88999999999988764
Q ss_pred hhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--------------C----CchhhHHHHHHHHHHhc
Q 002832 228 AHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH--------------R----KYRPGIDNLLVLLIGGI 289 (875)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------------~----~~~~~~~~~~~llv~~i 289 (875)
... .+.+++++++.+++....+++.++..+++..+....... . .....+..++.++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 332 336778899999887655443332222222211110000 0 00112344556778899
Q ss_pred CCchHHHHHHHHHHHHHHHHh----------cCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCCh
Q 002832 290 PIAMPTVLSVTMAIGSHRLSL----------QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDA 359 (875)
Q Consensus 290 P~~Lp~~~~i~~~~~~~~l~~----------~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~ 359 (875)
|.+|++.+.+...+.+..+.. ..+.+|+.+..|+||++++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 999999999999888754432 4688999999999999999999999999999999999886432211110
Q ss_pred --------------------------------------------HHHHHHHHHhcc-------------ccccChHHHHH
Q 002832 360 --------------------------------------------DAVVLMAARASR-------------VENQDAIDAAI 382 (875)
Q Consensus 360 --------------------------------------------~~~l~~~~~~~~-------------~~~~~~~~~ai 382 (875)
.+.....+.|.. .+...|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 011222222221 11235778888
Q ss_pred HHhcCCh----------------HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhcc-CChHHHH
Q 002832 383 VGMLADP----------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIER 445 (875)
Q Consensus 383 ~~~~~~~----------------~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~-~~~~~~~ 445 (875)
+..+++. ......|+.++..+|+|.||||||++++++|+..+|||||+.+|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7754321 0113578999999999999999999999999999999999999999998 4556677
Q ss_pred HHHHHHHHHHhcCCeEEEEEEEecCCCC-------------------------cCCCCCCeeEEEEeccCCCCCCChHHH
Q 002832 446 RVHAIIDKFAERGLRSLAVAYQEVPDGR-------------------------KESSGGPWQFIGLMPLFDPPRHDSAET 500 (875)
Q Consensus 446 ~~~~~~~~~~~~G~rvl~~A~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~ 500 (875)
.-.+.+++|+.+|+|+|++|||.+++++ .+.+|+||+++|..++||+++++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 7888999999999999999999998654 134799999999999999999999999
Q ss_pred HHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc---------------------------------------
Q 002832 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL--------------------------------------- 541 (875)
Q Consensus 501 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~--------------------------------------- 541 (875)
|+.|++||||+||+|||+.+||.+||..|++..+......+
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 99999999999999999999999999999997654322111
Q ss_pred ------ccccccccCCccc---HHHHhh--hCcEEEEeCHHHHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 542 ------LGQNKDESIVALP---VDELIE--KADGFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 542 ------~~~~~~~~~~~~~---~~~~~~--~~~vfar~sP~~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
+|+.+...+++.+ +-++.. +..++||+||.||+.+|+..++. +.+++.+|||+||.+|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 1111111111111 112222 23489999999999999999754 88999999999999999999999999
Q ss_pred c--CccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcC----HHHHHHH
Q 002832 610 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFP----PFMVLII 683 (875)
Q Consensus 610 g--~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~----~~~~l~~ 683 (875)
+ +|.+++. +||+.+.+..|..-.-+ .+||+.|.|+.+.+.|.+++|+...+..+.+.++.++... ++++.+.
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLL-VHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLL-VHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhe-eecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 5 8888887 99999988776664443 4699999999999999999999998888888887776544 4444444
Q ss_pred HHhh-cccccccc-CCCCCCC------C---C---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCccccccc
Q 002832 684 AILN-DGTIMTIS-KDRVKPS------P---L---PDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSS 749 (875)
Q Consensus 684 ~~~~-~~~~~~l~-~~~~~~~------~---~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (875)
|++. .++++.++ +|+..+. | + .......+.|+.+++.|++.+++.|++.+..+..... ..-|
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~-~~~G--- 973 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAV-TSNG--- 973 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeee-ccCC---
Confidence 4443 34456665 4543221 1 1 1122234677888899999999888776665532100 0011
Q ss_pred CCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHHHHHHHHHHHHHHHhhc--c---------ccc
Q 002832 750 LHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYAN--W---------SFA 818 (875)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~---------~~~ 818 (875)
. .. ++..++++++..+++..++. ...-+.+|.|+++-.+|..+++-+.+. .+|.. + ++.
T Consensus 974 ~---~~-d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i~i~gSi~~~f~f~-----~iy~~~~~~~~~~~~~~~~~ 1043 (1151)
T KOG0206|consen 974 L---TA-DYWTLGTTVFTIIVIVVNLK-IALETSYWTWINHIVIWGSILLWFVFL-----FIYSELTPAISTPDPFYGVA 1043 (1151)
T ss_pred C---cC-ChhhccceEEEEEEEEEEee-eeeeehheeHHHHHHHHHHHHHHHHHH-----HHHhccccccCCCccHHHHH
Confidence 1 11 11123334333322222221 122234555554433333332222111 11210 0 111
Q ss_pred ccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHhhh
Q 002832 819 AIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQR 865 (875)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~ 865 (875)
.....+..+|+.+++.++++++++..+|.+.+.++|...+..++.++
T Consensus 1044 ~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~ 1090 (1151)
T KOG0206|consen 1044 EHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEK 1090 (1151)
T ss_pred HHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHh
Confidence 12223445788889999999999999999999999988887776553
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-76 Score=646.26 Aligned_cols=769 Identities=21% Similarity=0.250 Sum_probs=526.2
Q ss_pred HHHHhcCCCccccccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCC-chhhHHHHHHHHHHHHHHHHHHH
Q 002832 44 ERLTIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP-DWQDFVGIVTLLLINSTISFIEE 118 (875)
Q Consensus 44 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~-~~~~~~~ii~~i~~~~~~~~~~e 118 (875)
.++++|-+|.+...|++.+ ..+++||..+++.++++.++.+++.....+... +|...+.++.+.++-..++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888999988876643 456788888888888888887776654443322 33344444444455555566666
Q ss_pred HHHHHHHHHHhhccCCcEEEE-ECCeEEEEecCCcCCCcEEEEecCCccccceEEEecC----CeeeeccccCCCCeeee
Q 002832 119 NNAGNAAAALMASLAPKSKVL-RDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD----PLKIDQSALTGESLPVT 193 (875)
Q Consensus 119 ~~~~~~~~~l~~~~~~~~~V~-rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~----~l~VdeS~LTGEs~pv~ 193 (875)
+++++. .+++..+++ |||...+ +++++++||+|.++.+++||||.++++.+ .+.+-+-.|+||+..+.
T Consensus 154 ~~rd~~------~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRE------LNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhh------hhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 655543 233455555 7776555 99999999999999999999999999744 25799999999997766
Q ss_pred cCC-----------------------------------------------CCceeecceeccCceeEEEEEecchhhhhh
Q 002832 194 KGP-----------------------------------------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (875)
Q Consensus 194 K~~-----------------------------------------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~ 226 (875)
|-| +|.++++|.+.+|.+.|+|++||.+|..
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 532 3679999999999999999999999963
Q ss_pred hhhhhccc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHH
Q 002832 227 AAHLVDST---NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (875)
Q Consensus 227 i~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~ 303 (875)
.++.. .+...++..+|.+.+.+++...+..++ ++.....+..|...+.+++.++...||.+|-+.+.++..+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 23322 455678888999988876554433332 2222334577888899999999999999999999999999
Q ss_pred HHHHHHhc----CCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCCh-H------------------
Q 002832 304 GSHRLSLQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDA-D------------------ 360 (875)
Q Consensus 304 ~~~~l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~-~------------------ 360 (875)
.++.+.+. |..+|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+. +
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 88888764 578999999999999999999999999999999999775432211110 0
Q ss_pred ---------------HHHHHHHHhccc----c--------ccChHHHHHHHhc-----------------CChHHHhhcc
Q 002832 361 ---------------AVVLMAARASRV----E--------NQDAIDAAIVGML-----------------ADPKEARANI 396 (875)
Q Consensus 361 ---------------~~l~~~~~~~~~----~--------~~~~~~~ai~~~~-----------------~~~~~~~~~~ 396 (875)
+.....+.|... + ..+|.+.|+++.- ..+.....+|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 111112222111 0 1234444443321 1111223479
Q ss_pred cEEEEecCCCCCceEEEEEEcC-CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcC
Q 002832 397 QEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKE 475 (875)
Q Consensus 397 ~~l~~~pf~~~~k~~sv~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~ 475 (875)
+++..+||+|++|||+.+++++ .++...|.|||+-+|......+ +.+++....|+++|+|++.+|.|.+++.+++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999975 6888999999999998877653 4667778899999999999999999865421
Q ss_pred --------------------------CCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 002832 476 --------------------------SSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (875)
Q Consensus 476 --------------------------~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (875)
..|+||.++|+.|.||+++++++.+++.||+||||+||+|||+.+||..||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 358899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC--------------------------CcccccccccccCC--cccHHHHhhh--CcEEEEeCHHHHHHHHHH
Q 002832 530 GMGTNMYP--------------------------SSALLGQNKDESIV--ALPVDELIEK--ADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 530 Gi~~~~~~--------------------------~~~~~~~~~~~~~~--~~~~~~~~~~--~~vfar~sP~~K~~iV~~ 579 (875)
++...... ..++.|++++-.+. ..|+-++..+ ..|+|||+|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 98653321 12233333221111 1233344333 348999999999999999
Q ss_pred HhhC-CCEEEEEcCCccCHHHHhhCCceEEe-c-CccHHHhhccCEEecCCChhHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 002832 580 LQAR-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTIYAVS 655 (875)
Q Consensus 580 lq~~-g~~Vam~GDG~NDapALk~AdVGIam-g-~gtd~ak~aADivL~~~~~~~i~~~i~~-gR~~~~~i~~~i~~~l~ 655 (875)
+|+. |..|+.+|||.||+.|+++||+||++ | +|.+++. |||+.+.+ |+.+-+++.| ||+.|+|-.+.-+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9986 89999999999999999999999998 5 7877666 99999976 9999988865 99999999998888776
Q ss_pred HHHHHHHHHHHHHH-hhcCCcCHH----HHHHHHHhhccccccccCCCCCCCC------------CCCchhhHHHHHHHH
Q 002832 656 ITIRIVLGFMLLAL-IWKFDFPPF----MVLIIAILNDGTIMTISKDRVKPSP------------LPDSWKLAEIFTTGV 718 (875)
Q Consensus 656 ~ni~~~~~~~~~~~-~~~~~~~~~----~~l~~~~~~~~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~ 718 (875)
....+..+...+.. ++-.|.+-+ ++.+..+.+-++.+++..|+.-.+. ...+....+-|..|+
T Consensus 853 RGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwv 932 (1051)
T KOG0210|consen 853 RGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWV 932 (1051)
T ss_pred hhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhh
Confidence 55443322222211 111122222 2333344444445677766542211 112222334566667
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHH
Q 002832 719 ILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLA 798 (875)
Q Consensus 719 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~ 798 (875)
++.++++.+....+++.....+. ...++.|+.+++..+.+.....++|.| .++++
T Consensus 933 LISiYQG~vim~g~~~l~~~ef~-------------------~ivaisFtaLi~tELiMVaLtv~tw~~------~m~va 987 (1051)
T KOG0210|consen 933 LISIYQGSVIMYGALLLFDTEFI-------------------HIVAISFTALILTELIMVALTVRTWHW------LMVVA 987 (1051)
T ss_pred hHHHHcccHHHHHHHHHhhhhhe-------------------EeeeeeeHHHHHHHHHHHhhhhhhhhH------HHHHH
Confidence 77777776655443333321110 112334444455555333332333422 23333
Q ss_pred HHHHHHHH-HHHHHhhcccccc-cCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Q 002832 799 FAVAQLIA-TLIAVYANWSFAA-IEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDL 860 (875)
Q Consensus 799 ~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~ 860 (875)
-++.+.+. ..+++... ++. -.-.+|.+++.+.++.++..++....|+++|++-||.+.++
T Consensus 988 e~lsL~~Yivsl~~l~~--yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl 1049 (1051)
T KOG0210|consen 988 ELLSLALYIVSLAFLHE--YFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKL 1049 (1051)
T ss_pred HHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhc
Confidence 23222111 11122111 111 11244556666777888888888999999999999887654
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-75 Score=649.53 Aligned_cols=571 Identities=23% Similarity=0.288 Sum_probs=419.2
Q ss_pred CHHHHHHHcCCCCCCCC-HHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhH
Q 002832 22 PMEEVFETLRCNKEGLS-TEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDF 100 (875)
Q Consensus 22 ~~~~~~~~l~~~~~GL~-~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~ 100 (875)
+.++.+..++.+ +|+. ++|++.-.++||.|+...+.+++-..|.+.-..|| ++|++..+..|.+. ..|+..
T Consensus 149 p~~~~~g~~~k~-~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYyS 220 (1160)
T KOG0209|consen 149 PTDEPFGYFQKS-TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYYS 220 (1160)
T ss_pred CcCCcchhhhhc-cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHHH
Confidence 344444444433 4665 34444555569999999988888888888888898 56666666666664 367766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCcEEEEECCeEEEEecCCcCCCcEEEEec---CCccccceEEEec
Q 002832 101 VGIVTLLLINSTISFIEENNAGNAAAALMAS--LAPKSKVLRDGKWMEEDAAILVPGDIISVKL---GDIIPADARLLEG 175 (875)
Q Consensus 101 ~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~--~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~---G~~vPaD~~ll~g 175 (875)
+.-+++++....--..|+.+ .+..++++ -+..+.|.|+++|+.+.++||.|||+|.+.. ...||||.+|+.|
T Consensus 221 lFtLfMli~fE~tlV~Qrm~---~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G 297 (1160)
T KOG0209|consen 221 LFTLFMLIAFEATLVKQRMR---TLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec
Confidence 66555554433333344443 34444444 3456889999999999999999999999987 5679999999999
Q ss_pred CCeeeeccccCCCCeeeecCC-----------------CCceeecceecc-------------CceeEEEEEecchhhhh
Q 002832 176 DPLKIDQSALTGESLPVTKGP-----------------GDSVYSGSTCKQ-------------GEIEAVVIATGVHTFFG 225 (875)
Q Consensus 176 ~~l~VdeS~LTGEs~pv~K~~-----------------~~~v~~Gt~v~~-------------G~~~~~V~~tG~~T~~g 225 (875)
++ .|||++|||||.|..|.+ ...+|.||.+++ |.+.+.|++||.+|..|
T Consensus 298 sc-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQG 376 (1160)
T KOG0209|consen 298 SC-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQG 376 (1160)
T ss_pred ce-eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCC
Confidence 97 599999999999999976 136999999864 67999999999999999
Q ss_pred hhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc----CCchhhHHHHHHHHHHhcCCchHHHHHHH
Q 002832 226 KAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH----RKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300 (875)
Q Consensus 226 ~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~llv~~iP~~Lp~~~~i~ 300 (875)
++.+.+-.. ++.+.-.+.. + +++.++.+++++.....|.-.. ++-...+..+..++...+|+.||+-++++
T Consensus 377 kLvRtilf~aervTaNn~Et--f--~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmA 452 (1160)
T KOG0209|consen 377 KLVRTILFSAERVTANNRET--F--IFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMA 452 (1160)
T ss_pred ceeeeEEecceeeeeccHHH--H--HHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHH
Confidence 987766543 3333222211 1 1111111111111111111111 12223345556677888999999999999
Q ss_pred HHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccC-------CCChHHHHHHHHHhc--c
Q 002832 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK-------GVDADAVVLMAARAS--R 371 (875)
Q Consensus 301 ~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~-------~~~~~~~l~~~~~~~--~ 371 (875)
.-.+...++|.+++|..+-.+.-.|++|+.|||||||||+..|.|..+--..... ....+.+..+|.+.+ .
T Consensus 453 VNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~ 532 (1160)
T KOG0209|consen 453 VNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVL 532 (1160)
T ss_pred HHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997643100000 111223333332222 1
Q ss_pred c---cccChHHHHHHHhcCChHHH----------hhcccEEEEecCCCCCceEEEEEEcC----CCeEEEEEcCcHHHHH
Q 002832 372 V---ENQDAIDAAIVGMLADPKEA----------RANIQEVHFLPFNPTDKRTALTYIDS----EGKMHRVSKGAPEQIL 434 (875)
Q Consensus 372 ~---~~~~~~~~ai~~~~~~~~~~----------~~~~~~l~~~pf~~~~k~~sv~~~~~----~g~~~~~~KGa~e~i~ 434 (875)
. --+||+++|.+...+..-+. ....++.+.+.|+|.-|||+++.... +-+++..+|||||.|.
T Consensus 533 le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~ 612 (1160)
T KOG0209|consen 533 LEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQ 612 (1160)
T ss_pred hcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHH
Confidence 2 34799999998876422111 11356678899999999999987532 2367888999999999
Q ss_pred HhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCC--------CCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHh
Q 002832 435 NLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD--------GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALN 506 (875)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~--------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ 506 (875)
++.. +.++++++...+++++|.||+|++||+++. ..+++.|+||+|.|++.|.-|+|+|++++|++|++
T Consensus 613 ~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~ 689 (1160)
T KOG0209|consen 613 EMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNN 689 (1160)
T ss_pred HHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhc
Confidence 8875 457788888999999999999999999873 23678899999999999999999999999999999
Q ss_pred CCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC---------------------------------------ccccccccc
Q 002832 507 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPS---------------------------------------SALLGQNKD 547 (875)
Q Consensus 507 aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~---------------------------------------~~~~~~~~~ 547 (875)
++.+++||||||+.||.++|+++||..+.... ..++|..++
T Consensus 690 SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~ 769 (1160)
T KOG0209|consen 690 SSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALD 769 (1160)
T ss_pred cCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHH
Confidence 99999999999999999999999996541100 011222222
Q ss_pred ccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 548 ~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
.-.....+.+++..+.||||+.|.||..++..|++.|+.++|||||+||+.|||+||||||+-+
T Consensus 770 ~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 770 HLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred HHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 2122224556677788999999999999999999999999999999999999999999999853
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-66 Score=548.94 Aligned_cols=520 Identities=27% Similarity=0.379 Sum_probs=401.6
Q ss_pred HHhHHHHHHHHHHHHHHHHH----hCCCCCCchhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhcc-CCcEEEE
Q 002832 69 MWNPLSWVMEAAAIMAIALA----NGGGKPPDWQDFVGIVTLL----LINSTISFIEENNAGNAAAALMASL-APKSKVL 139 (875)
Q Consensus 69 ~~~~~~~~l~~~~il~~~~~----~~~~~~~~~~~~~~ii~~i----~~~~~~~~~~e~~~~~~~~~l~~~~-~~~~~V~ 139 (875)
.+||..++.++.++++.++. ..++...++.....+.+++ ++..+.+.+.|-|.+...++|++.. ...++++
T Consensus 30 ~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l 109 (681)
T COG2216 30 VKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLL 109 (681)
T ss_pred hhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHh
Confidence 46787777666666665322 2222112222222222222 3334445555655555556665432 3357777
Q ss_pred EC-CeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCC---CceeecceeccCceeEEE
Q 002832 140 RD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEAVV 215 (875)
Q Consensus 140 rd-g~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~~V 215 (875)
++ |.++.+++.+|+.||+|.+++||.||+||.+++|.+ +||||++||||.||-|.+| +.|-.||.+.+.+.+..+
T Consensus 110 ~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~iri 188 (681)
T COG2216 110 RADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRI 188 (681)
T ss_pred cCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEE
Confidence 75 899999999999999999999999999999999997 8999999999999999998 679999999999999999
Q ss_pred EEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCch
Q 002832 216 IATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFC-ICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAM 293 (875)
Q Consensus 216 ~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~L 293 (875)
++.-.+|.+.|+..+++.+ .+++|-+--++-+..-+ +++++....+..+..|.. .-...+...++++++.+|-..
T Consensus 189 ta~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~~---g~~~~i~~LiALlV~LIPTTI 265 (681)
T COG2216 189 TANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSG---GGAASVTVLVALLVCLIPTTI 265 (681)
T ss_pred EcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHcC---CCCcCHHHHHHHHHHHhcccH
Confidence 9999999999999999988 66788666554432111 111111111111111111 112345677889999999988
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhcccc
Q 002832 294 PTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVE 373 (875)
Q Consensus 294 p~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 373 (875)
.--++..--.|+.|+.+.|++-++..++|..|.+|++..|||||+|-|+=.-.++. ...+.+.+++...|..++...
T Consensus 266 GgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~D 342 (681)
T COG2216 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLAD 342 (681)
T ss_pred HHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhcc
Confidence 77777666678999999999999999999999999999999999999865444432 235788888888777766443
Q ss_pred ccChHHHHHHHhcCChH-HHh-hccc-EEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCCh-HHHHHHHH
Q 002832 374 NQDAIDAAIVGMLADPK-EAR-ANIQ-EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS-EIERRVHA 449 (875)
Q Consensus 374 ~~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~-~~~~~~~~ 449 (875)
+.|..++++..+++.. +.+ .... ..+++||+.+.+++++-. +++ ..+.|||.+.+.+...... ..++++++
T Consensus 343 -eTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~ 417 (681)
T COG2216 343 -ETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDA 417 (681)
T ss_pred -CCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHH
Confidence 3355566665543221 111 1111 357899999887666543 233 4578999999999876432 36778889
Q ss_pred HHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 002832 450 IIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (875)
Q Consensus 450 ~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (875)
..++.++.|-..++++... +++|.+.++|-+||+.+|-+.+||++|||++|+||||+.||..||++.
T Consensus 418 ~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA 484 (681)
T COG2216 418 AVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 484 (681)
T ss_pred HHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh
Confidence 9999999999999999866 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 530 GMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 530 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
|+++ ..|+++||+|.++|+.-|.+|+.|||||||.||+|||.+||||+||
T Consensus 485 GVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 485 GVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred Cchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh
Confidence 9852 4799999999999999999999999999999999999999999999
Q ss_pred cCccHHHhhccCEEecCCChhHHHHHHHHHHHHH
Q 002832 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643 (875)
Q Consensus 610 g~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~ 643 (875)
.+||++||||+.+|=+|.|...+.+.++.|++..
T Consensus 535 NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 535 NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred ccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 9999999999999999999999999999999863
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=311.54 Aligned_cols=220 Identities=36% Similarity=0.530 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc-EEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEe-cCCeee
Q 002832 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPK-SKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE-GDPLKI 180 (875)
Q Consensus 103 ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~-g~~l~V 180 (875)
++++++++.++++++++|+++..+++++..+++ ++|+|||++++++++||+|||+|+|++||++||||++++ |. +.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-ccc
Confidence 566778889999999999999999999888887 999999999999999999999999999999999999999 65 689
Q ss_pred eccccCCCCeeeecC-----CCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002832 181 DQSALTGESLPVTKG-----PGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (875)
Q Consensus 181 deS~LTGEs~pv~K~-----~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (875)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+..... .+++++++.++++..++..+
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 999999999999999999999999999999999988776 45689999999998886554
Q ss_pred HHHHHHHHHHHhhh-cccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhh
Q 002832 255 IAVGMIVEIIVMYP-IQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEE 323 (875)
Q Consensus 255 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~ 323 (875)
+++..++.+++++. ....+|...+..+++++++++|++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 44333333332222 2556778889999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-26 Score=240.40 Aligned_cols=211 Identities=32% Similarity=0.437 Sum_probs=149.4
Q ss_pred ceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCC
Q 002832 327 MDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNP 406 (875)
Q Consensus 327 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~ 406 (875)
|++||||||||||+|+|.+. . .....++..+... ...+.||+..++.......... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v~-----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA-----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE-----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEEE-----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hhhh-----hhee
Confidence 68999999999999999981 1 3344455554333 3345679998887765432211 1111 1111
Q ss_pred CCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEE
Q 002832 407 TDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGL 486 (875)
Q Consensus 407 ~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~ 486 (875)
...+...... ++. +. |+++.+.+..... ............+|.+.+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1111111111 112 22 8888887754321 1111122233556666666664 3489999
Q ss_pred eccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEE
Q 002832 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (875)
Q Consensus 487 i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa 566 (875)
+.+.|++||+++++|++|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 13799
Q ss_pred Ee--CHHHH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCC
Q 002832 567 GV--FPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (875)
Q Consensus 567 r~--sP~~K--~~iV~~lq~~g~~Vam~GDG~NDapALk~Ad 604 (875)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1e-15 Score=136.83 Aligned_cols=123 Identities=26% Similarity=0.395 Sum_probs=107.9
Q ss_pred eEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhh
Q 002832 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (875)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (875)
...+.++---++=++++++|++|++. +++++.|||...+-.+.|+-+|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 46777777888899999999999999 99999999999999999999998643
Q ss_pred CcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe-c--CccHHHhhccCEEecCCChhHHHHH
Q 002832 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 562 ~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam-g--~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
++||...|+.|.++++.|++++++|.|+|||.||.+||++||+||.. + ...+-+.++||+++-+ ...+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999986 4 4567778999999854 4444443
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.7e-13 Score=113.37 Aligned_cols=67 Identities=36% Similarity=0.496 Sum_probs=60.9
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccc-ccccHHHHHHHHHHhHHHHHHHHHHHHH
Q 002832 18 LENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEE-KQESKILKFLGFMWNPLSWVMEAAAIMA 84 (875)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~-~~~~~~~~~~~~~~~~~~~~l~~~~il~ 84 (875)
||.++.++++++|+++ .+|||++||++|+++||+|+++. ++++.|..|+++|.+|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 8999999999999966 78999999999999999999965 5578888999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.8e-09 Score=120.22 Aligned_cols=208 Identities=18% Similarity=0.211 Sum_probs=144.7
Q ss_pred eeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccc----------------
Q 002832 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ---------------- 544 (875)
Q Consensus 481 l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~---------------- 544 (875)
-.|.|++....+.|++....|+.|-++-||.+-.|-.+....+-.|+++||.........+..+
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 3689999999999999999999999999999999999999999999999996432211111100
Q ss_pred ---------------------cccc-----------cC--------CcccHHHH----------hh-------hCcEEEE
Q 002832 545 ---------------------NKDE-----------SI--------VALPVDEL----------IE-------KADGFAG 567 (875)
Q Consensus 545 ---------------------~~~~-----------~~--------~~~~~~~~----------~~-------~~~vfar 567 (875)
.++. .+ ++....++ ++ -+..|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0000 00 00001110 01 1226889
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHH--HHhhCCceEEecC-------------ccHH--Hh-------------
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAP--ALKKADIGIAVAD-------------ATDA--AR------------- 617 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDap--ALk~AdVGIamg~-------------gtd~--ak------------- 617 (875)
++|+.-.++++.+|++|++|+.+|.-.|-.. -.-+||++|++.. ++.. |+
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 9999999999999999999999999988543 4568999998852 1111 11
Q ss_pred ---hccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCcCHHHHHHHHHhhc
Q 002832 618 ---SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL-ALIWKFDFPPFMVLIIAILND 688 (875)
Q Consensus 618 ---~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~ 688 (875)
-++|+-+-...+-+|..+|+-.|....-+|+..+|.+.......+..++. +++.|..++.-+++|...+--
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 12333343444567788889999999999999999998887655444443 334566677777888877653
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.8e-11 Score=118.26 Aligned_cols=167 Identities=17% Similarity=0.195 Sum_probs=107.4
Q ss_pred cCCcCHHHHHHHHHhhccc-cccccCCCCCC------CCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCc
Q 002832 672 KFDFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPR 743 (875)
Q Consensus 672 ~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~------~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 743 (875)
|.|++|+|+||+|+++|.+ ++++++|++++ |++++. ...++++...+..|+++++.+++.|++..+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999998 69999988643 222333 2335678888899999999999888777642
Q ss_pred ccccccCCccchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCCCcccc--C--chHHHHHHHHHHHHHHHHHHHhhc--cc
Q 002832 744 TFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD--R--PGLLLVLAFAVAQLIATLIAVYAN--WS 816 (875)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~~--~~ 816 (875)
+|......+.. ...+++++|...+++|+ +.+++|+++.+.+. + .|.+++.++++..++..+ ..|.+ -.
T Consensus 76 -~~~~~~~~~~~---~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~-i~~~P~~~~ 150 (182)
T PF00689_consen 76 -FGWDEETNNDN---LAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQIL-IVYVPGLNR 150 (182)
T ss_dssp -TCSSSHHHTTC---HHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHH-HHHSTTHHH
T ss_pred -cccccccchhH---HHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHH-HhcchhhHh
Confidence 11110000000 13467888888888886 67899996654333 2 356666665554433333 33332 22
Q ss_pred ccccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 817 FAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (875)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 848 (875)
.+.+.++++..|+.+++.+++.+++.|++|++
T Consensus 151 ~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 35677888888888999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.8e-10 Score=94.78 Aligned_cols=59 Identities=37% Similarity=0.593 Sum_probs=53.1
Q ss_pred HcCCCC-CCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002832 29 TLRCNK-EGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIAL 87 (875)
Q Consensus 29 ~l~~~~-~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 87 (875)
.++++. +|||++|+++|+++||+|+++.++ .+.|+.++++|++|+.++|++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 466774 499999999999999999998875 77888999999999999999999999876
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.02 E-value=2e-09 Score=110.19 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=97.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+++|++.+.|+.+|+.| ++.++||-....+..+++++|+... ........+. ..+.. ..-..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~-~an~l~~~~~--g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDDS--DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh-hceeeEEecC--CeeEC------------eeecCcc
Confidence 68999999999999975 9999999999999999999999531 1111100000 00000 0013578
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~g 639 (875)
+|...++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-... +.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH-TYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCccc-CHHHHHHHHHHH
Confidence 9999999999888889999999999999999999999987666666666655543 477777777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.9e-09 Score=114.51 Aligned_cols=131 Identities=20% Similarity=0.279 Sum_probs=98.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEE-EeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA-GVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa-r~sP 570 (875)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.........+. +..+.. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~----dg~ltg----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIM----DGKLTG----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEE----CCEEEe----------EecCccCCc
Confidence 689999999999999999999999999888889999999842100000000 000000 0000 0234
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|||| ++.+..++.||.++...++..+...+-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888887654 3 5689999999999999999999999 888999999999999889998887653
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.1e-09 Score=107.94 Aligned_cols=129 Identities=22% Similarity=0.278 Sum_probs=93.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE-eCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG-VFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar-~sP 570 (875)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..- ........ +..... .+.++ ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 6899999999999999999999999999999999999998531 10000000 000000 00011 123
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
..|..+++.+.++ | +.+.|+||+.||.+|+++|+++++++ +.+..+++||.++.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3467777765544 2 35889999999999999999999985 567888999999999999887653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.4e-09 Score=90.76 Aligned_cols=66 Identities=29% Similarity=0.392 Sum_probs=53.8
Q ss_pred cccChHHHHHHHhcCC------hHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccC
Q 002832 373 ENQDAIDAAIVGMLAD------PKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN 439 (875)
Q Consensus 373 ~~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~ 439 (875)
..++|.|.|++.+... ....+..+++++.+||+|++|||+++++ .++.+++++|||||.|+++|+.
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 3567888888876532 3456778999999999999999999998 3345777999999999999974
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=4e-08 Score=103.14 Aligned_cols=153 Identities=24% Similarity=0.271 Sum_probs=104.3
Q ss_pred EEeccCCC-CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCc-ccc---ccc-----cc-----
Q 002832 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSS-ALL---GQN-----KD----- 547 (875)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~-~~~---~~~-----~~----- 547 (875)
|.+.-.|+ +.|.+.++|+++++.|+++++.||.+...+..+.+++|+..... ... +.. ++. .+
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 77899999999999999999999999999999999999853211 000 000 000 00
Q ss_pred -------------------cc--------CCc---ccHHHHhhhCc--E-------EEEeCHHH--HHHHHHHHhhC-C-
Q 002832 548 -------------------ES--------IVA---LPVDELIEKAD--G-------FAGVFPEH--KYEIVKRLQAR-K- 584 (875)
Q Consensus 548 -------------------~~--------~~~---~~~~~~~~~~~--v-------far~sP~~--K~~iV~~lq~~-g- 584 (875)
.. ... ++..+.+++.. + +....|.. |..-++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 000 11222222211 1 12444433 77777777554 2
Q ss_pred --CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 585 --HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 585 --~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
..++++||+.||.+|++.|++|+||+++.+..|++||+|..+++=.++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 45899999999999999999999999999999999999998888788887775
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.6e-08 Score=103.49 Aligned_cols=144 Identities=20% Similarity=0.274 Sum_probs=98.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--Cccc-cc-cc------ccc-------------
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSAL-LG-QN------KDE------------- 548 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~~-~~-~~------~~~------------- 548 (875)
++-+++.++|++|++.|+++++.||.+...+..+++++++...... ...+ .. .. .+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4888999999999999999999999999999999999998532110 0000 00 00 000
Q ss_pred -----c---------CCc---ccHHHHhhhCc--E-----EEEeCH--HHHHHHHHHHhhC-C---CEEEEEcCCccCHH
Q 002832 549 -----S---------IVA---LPVDELIEKAD--G-----FAGVFP--EHKYEIVKRLQAR-K---HICGMTGDGVNDAP 598 (875)
Q Consensus 549 -----~---------~~~---~~~~~~~~~~~--v-----far~sP--~~K~~iV~~lq~~-g---~~Vam~GDG~NDap 598 (875)
. ... ..+.+.+++.. + +..++| .+|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 000 01111222211 1 123333 5788888877653 3 35899999999999
Q ss_pred HHhhCCceEEecCccHHHhhccCEEecCCChhHHHHH
Q 002832 599 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 599 ALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
|++.|+.|+||++|.+.+|+.||+|..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999976666665543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.8e-08 Score=97.27 Aligned_cols=100 Identities=19% Similarity=0.262 Sum_probs=81.4
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE--eCHHHHHHH
Q 002832 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--VFPEHKYEI 576 (875)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar--~sP~~K~~i 576 (875)
.+|+.|++.|+++.++|+.+...+....+.+|+.. .|.. -.|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 57999999999999999999999999999999852 1111 124444555
Q ss_pred HHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC
Q 002832 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (875)
Q Consensus 577 V~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~ 628 (875)
++.++-....++|+||+.||.+|++.|++++||+++.+..|+.||+|..+++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 5555444456999999999999999999999999999999999999986544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.4e-08 Score=103.76 Aligned_cols=66 Identities=21% Similarity=0.204 Sum_probs=55.3
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. | +.|+++|||.||.+||+.|++|+||++|++.+|++||+|..+++=.++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555555443 3 45899999999999999999999999999999999999998888888887775
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.69 E-value=9.6e-08 Score=93.51 Aligned_cols=97 Identities=27% Similarity=0.403 Sum_probs=77.8
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 579 (875)
+|++|++.|+++.++||+....+..+.+++|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 89999999999999999999999999999998521 1111 223444433
Q ss_pred H----hhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC
Q 002832 580 L----QARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (875)
Q Consensus 580 l----q~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~ 628 (875)
+ .-..+.+.|+||+.||.+|++.|++++++.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 3 223457999999999999999999999999888999999999997554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.4e-07 Score=101.35 Aligned_cols=154 Identities=21% Similarity=0.228 Sum_probs=107.2
Q ss_pred EEeccCCC-CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC---------Ccccccccccc------
Q 002832 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP---------SSALLGQNKDE------ 548 (875)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~---------~~~~~~~~~~~------ 548 (875)
|.+.-.|. +.+.++++|+++++.|+++.+.||.+...+..+.+++|+...... ...+....++.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999998641100 00000000000
Q ss_pred -----------------------------------------------cCC----------cccHHHHh---hh-----Cc
Q 002832 549 -----------------------------------------------SIV----------ALPVDELI---EK-----AD 563 (875)
Q Consensus 549 -----------------------------------------------~~~----------~~~~~~~~---~~-----~~ 563 (875)
..+ ....++.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 00111111 11 11
Q ss_pred EE-------EEeCH--HHHHHHHHHHhhC-CC---EEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChh
Q 002832 564 GF-------AGVFP--EHKYEIVKRLQAR-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (875)
Q Consensus 564 vf-------ar~sP--~~K~~iV~~lq~~-g~---~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~ 630 (875)
.+ -...| .+|..-++.+.+. |- -|+++||+.||.+||+.|+.||||++|++.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 22 23333 3688888877763 54 399999999999999999999999999999999999888888888
Q ss_pred HHHHHHHH
Q 002832 631 VIISAVLT 638 (875)
Q Consensus 631 ~i~~~i~~ 638 (875)
++..+++.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 88888864
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-07 Score=97.70 Aligned_cols=106 Identities=23% Similarity=0.205 Sum_probs=82.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-----ccccccccccCCcccHHHHhhhCcEE
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS-----ALLGQNKDESIVALPVDELIEKADGF 565 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~vf 565 (875)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+........ .++| ++.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG-------------------~v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG-------------------RVV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec-------------------eee
Confidence 5899999999999999999999999999999999999999964311100 1111 234
Q ss_pred EE-eCHHHHHHHHHHHhh-CCC---EEEEEcCCccCHHHHhhCCceEEecCccHH
Q 002832 566 AG-VFPEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDA 615 (875)
Q Consensus 566 ar-~sP~~K~~iV~~lq~-~g~---~Vam~GDG~NDapALk~AdVGIamg~gtd~ 615 (875)
.+ +..+.|.+.++.+.+ .|. .+.++|||.||.|||+.|+.+++++.....
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l 191 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKL 191 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHH
Confidence 33 334789988866655 354 488999999999999999999999854443
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.8e-07 Score=97.69 Aligned_cols=145 Identities=23% Similarity=0.283 Sum_probs=98.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--Cc-ccccc--------cccc------------
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SS-ALLGQ--------NKDE------------ 548 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~-~~~~~--------~~~~------------ 548 (875)
.+.+.+.++|+++++.|+++++.||.+...+..+.+++|+...... .. +.... ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996421100 00 00000 0000
Q ss_pred -------c-------------CCcccHHHHhhhCc---------EEEEeCH--HHHHHHHHHHhhC-C---CEEEEEcCC
Q 002832 549 -------S-------------IVALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQAR-K---HICGMTGDG 593 (875)
Q Consensus 549 -------~-------------~~~~~~~~~~~~~~---------vfar~sP--~~K~~iV~~lq~~-g---~~Vam~GDG 593 (875)
. .+.+...++.++.. .+..+.| .+|..-++.+.+. | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00001111222111 1223334 4688878777653 3 468999999
Q ss_pred ccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhH----HHHHH
Q 002832 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAV 636 (875)
Q Consensus 594 ~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~----i~~~i 636 (875)
.||.+|++.|++|+||+++.+..|+.||.|..+++-.. +..++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999987776666 55444
|
catalyze the same reaction as SPP. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-07 Score=100.87 Aligned_cols=66 Identities=18% Similarity=0.172 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCE--EecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADi--vL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. | ..|+++|||-||.+||+.|+.||||++|.+.+|++||. |..+++-.++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 477777776554 3 45899999999999999999999999999999999996 666777777777764
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.4e-07 Score=99.49 Aligned_cols=66 Identities=20% Similarity=0.218 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccC--EEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aAD--ivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||++|++.+|++|| .|..+++=.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 366666655443 3 4589999999999999999999999999999999988 6777777777777775
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.4e-07 Score=93.40 Aligned_cols=128 Identities=20% Similarity=0.201 Sum_probs=91.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++++.++.|+++ +++.++|+.....+..+.+++|+..-. . ..+...+ +..... +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~-~~~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-C-HSLEVDE-DGMITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-c-ceEEECC-CCeEEC------------ccccccc
Confidence 5689999999999999 999999999999999999999985211 0 0000000 000000 0012378
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
.|...++.++..+..+.|+|||.||.+|.++|++|+..+.+.+...+.++..+ -+++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~-~~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPA-VHTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCcccc-cCCHHHHHHHH
Confidence 89999999998889999999999999999999999998765555555566522 24466665544
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=3e-07 Score=92.81 Aligned_cols=108 Identities=23% Similarity=0.303 Sum_probs=82.7
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHH
Q 002832 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (875)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 578 (875)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..++|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999998421 11 1133555444
Q ss_pred HH-hhCC---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCC----ChhHHHHHHHH
Q 002832 579 RL-QARK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP----GLSVIISAVLT 638 (875)
Q Consensus 579 ~l-q~~g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~----~~~~i~~~i~~ 638 (875)
.+ ++.| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++-.. .+..+.+.+..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 43 3333 4699999999999999999999999988888899999998533 24445554543
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=8.6e-07 Score=95.50 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.++ | +-|+++||+.||.+|++.|++|++||++.+..|+.||.|..+++=.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466655544332 3 35899999999999999999999999999999999999998888888888775
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.5e-07 Score=94.22 Aligned_cols=143 Identities=18% Similarity=0.195 Sum_probs=99.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccc-------------cc---------
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNK-------------DE--------- 548 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~-------------~~--------- 548 (875)
..+-|++.+++++++++|+++++.||.....+..+..++++..... ..+|.-. +.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I---~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFI---CSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEE---EGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhc---ccccceeeecccccchhhheeccchhheeeh
Confidence 3477899999999999999999999999999999999999852110 0011000 00
Q ss_pred --------------------c------------------------------------CCcccHHH-------HhhhCcE-
Q 002832 549 --------------------S------------------------------------IVALPVDE-------LIEKADG- 564 (875)
Q Consensus 549 --------------------~------------------------------------~~~~~~~~-------~~~~~~v- 564 (875)
. .+.+.+++ .......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDV 170 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeE
Confidence 0 00001111 1111101
Q ss_pred ------EEEeCH--HHHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHH
Q 002832 565 ------FAGVFP--EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 565 ------far~sP--~~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i 632 (875)
+-.++| ..|..-++.+.+. .+.+.++||+.||.+||+.|+.|+||+++++..|+.||.+....+=.++
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv 250 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGV 250 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHH
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChH
Confidence 223444 5688888877653 3568899999999999999999999999999999999999987766777
Q ss_pred HHHH
Q 002832 633 ISAV 636 (875)
Q Consensus 633 ~~~i 636 (875)
.++|
T Consensus 251 ~~~i 254 (254)
T PF08282_consen 251 AKAI 254 (254)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.45 E-value=7e-07 Score=91.45 Aligned_cols=117 Identities=26% Similarity=0.354 Sum_probs=83.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... ...... ..+ +... +-..+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~-~~~-~g~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELV-FDE-KGFI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEE-EcC-CCeE----------ecceeeEEccc
Confidence 5899999999999999999999999999999999999997421 111111 000 0000 00112234567
Q ss_pred HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccC
Q 002832 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (875)
Q Consensus 572 ~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aAD 621 (875)
.|...++.+.++ .+.+.|+||+.||.+|+++|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 787777766543 23589999999999999999999999865555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.45 E-value=0.00015 Score=83.74 Aligned_cols=101 Identities=16% Similarity=0.218 Sum_probs=75.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-----~Vigsd~-------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-----GVFASDG-------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-----EEEeCCC-------------------ccccCCc
Confidence 588999999999999999999999999999999999999722 1221111 1135577
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHh
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak 617 (875)
.|.+.++.....+. +.++||..||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~~~-~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGERG-FDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCccC-eeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 77665543322222 5688999999999999999999986554444
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.42 E-value=8.9e-07 Score=103.67 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=48.3
Q ss_pred EEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 586 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 586 ~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
-|+++|||.||.+||+.|+.|||||+|.+..|++||+|..+++=.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5889999999999999999999999999999999999998888888888775
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.7e-06 Score=88.20 Aligned_cols=135 Identities=12% Similarity=0.055 Sum_probs=87.5
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC-cccccccccccCCcccHHHHhhhCcEE---E
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-SALLGQNKDESIVALPVDELIEKADGF---A 566 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vf---a 566 (875)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++........ ....+......... -..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 378999999999999999999999999999888888887543221111 11111111100000 0000 0
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHh--hccCEEecCCChhHHHHHHH
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak--~aADivL~~~~~~~i~~~i~ 637 (875)
.| ...|..+++.++...+.+.|+|||.||.+|++.||++++=+.-.+-.+ .-+.+.. ++|..+...++
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11 246999999998888889999999999999999999887552112111 1122222 55777776654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.8e-06 Score=92.16 Aligned_cols=64 Identities=23% Similarity=0.274 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
.|..-++.+.+. | +.++++||+.||.+|++.|+.|++|+++++..|+.||++..+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 488777777654 2 469999999999999999999999999999999999999987776666543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.31 E-value=8.1e-07 Score=90.18 Aligned_cols=92 Identities=24% Similarity=0.317 Sum_probs=70.5
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH-H-
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE-H- 572 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~-~- 572 (875)
|++++.|+.++++|++++++||+....+..+++.+|+.... +.+.+... - .+....+|.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~-~---------~~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD-N---------GGGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC-T---------TCCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee-c---------ccceeeeeECCCCCC
Confidence 88889999999999999999999999999999999996421 11111100 0 012245666665 4
Q ss_pred -HHHHHHHH------hhCCCEEEEEcCCccCHHHHh
Q 002832 573 -KYEIVKRL------QARKHICGMTGDGVNDAPALK 601 (875)
Q Consensus 573 -K~~iV~~l------q~~g~~Vam~GDG~NDapALk 601 (875)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999997
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.30 E-value=7.8e-06 Score=87.29 Aligned_cols=66 Identities=20% Similarity=0.197 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhC------CCEEEEEcCCccCHHHHhhCCceEEecCcc---HHHhhc--c-CEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~------g~~Vam~GDG~NDapALk~AdVGIamg~gt---d~ak~a--A-DivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. ...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|..+++=.++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 455555555432 456999999999999999999999999987 468876 4 58877778888887775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.5e-06 Score=80.17 Aligned_cols=113 Identities=24% Similarity=0.413 Sum_probs=88.5
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 579 (875)
.|+.+.++||++-+|||.+...+..=|+++||.. ...| -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~qG--------------------------~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQG--------------------------ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eeec--------------------------hHhHHHHHHH
Confidence 5899999999999999999999999999999952 1111 3577777766
Q ss_pred HhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC----hhHHHHHHHHHHHHHH
Q 002832 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQ 644 (875)
Q Consensus 580 lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~----~~~i~~~i~~gR~~~~ 644 (875)
|.++ -+-|+++||..||-|+|++...++|..++.+-.++.||+|+-... +..+.+.|...+..++
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 6543 346999999999999999999999999999999999999986554 4444555554444443
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.3e-06 Score=85.15 Aligned_cols=125 Identities=20% Similarity=0.280 Sum_probs=83.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCCcccccccccccCCcccHHHHhhhCcEEEE---
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGQNKDESIVALPVDELIEKADGFAG--- 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar--- 567 (875)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +..........+ . .+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g--------------~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--G--------------EYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--C--------------cEECccCC
Confidence 478999999999999999999999999999999999999963 111100000000 0 00000
Q ss_pred ---eCHHHHHHHHHHHhhC-C-CEEEEEcCCccCHHHHhh--CCceEEecCc--cHHHhhccCEEecCCChhHHHH
Q 002832 568 ---VFPEHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 568 ---~sP~~K~~iV~~lq~~-g-~~Vam~GDG~NDapALk~--AdVGIamg~g--td~ak~aADivL~~~~~~~i~~ 634 (875)
..+..|.+.++.+.++ | +.+.|+||+.||..|.++ ++++++.|.+ .+.....+|+++ +++..+..
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 1123477777766654 2 468899999999999777 5776766532 233445689988 44666554
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.5e-06 Score=82.72 Aligned_cols=110 Identities=22% Similarity=0.225 Sum_probs=76.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
.+-|++++.++.||+.|.+|.++||--...+..+|.++||+........+.=+. +..... ++.. -.-....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-~Gk~~g--fd~~------~ptsdsg 158 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-DGKYLG--FDTN------EPTSDSG 158 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc-CCcccc--cccC------CccccCC
Confidence 467999999999999999999999999999999999999975322111110000 000000 0000 0001124
Q ss_pred HHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhCCceEEec
Q 002832 572 HKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 572 ~K~~iV~~lq~~--g~~Vam~GDG~NDapALk~AdVGIamg 610 (875)
-|.++++.++++ -..++|+|||.||.+|+..||-=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 799999999885 347999999999999999977666654
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.8e-05 Score=85.30 Aligned_cols=67 Identities=22% Similarity=0.172 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhh-------CCCEEEEEcCCccCHHHHhhCCceEEecCcc-HH-----HhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQA-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~-------~g~~Vam~GDG~NDapALk~AdVGIamg~gt-d~-----ak~aADivL~~~~~~~i~~~i~ 637 (875)
-+|..-++.+.+ ....|+.+|||-||.+||+.|++|||||++. +. .+..||++....+-.++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 346655555543 3356899999999999999999999999544 21 3447889888888778887775
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.2e-05 Score=83.45 Aligned_cols=66 Identities=24% Similarity=0.298 Sum_probs=50.6
Q ss_pred HHHHHHHHHhh----CC-CEEEEEcCCccCHHHHhhCCceEEecCccHHHh----hcc-CEEe--cCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQA----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~----~g-~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak----~aA-DivL--~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+ .. +.|+++||+.||.+|++.|++|++|++|.+..| ++| +.+. ..++=..+.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 55555555543 24 789999999999999999999999999999999 666 5666 3444566766664
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.4e-05 Score=83.24 Aligned_cols=132 Identities=12% Similarity=0.047 Sum_probs=84.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--CcccccccccccCCcccHHHHhhhCcE--E-E
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQNKDESIVALPVDELIEKADG--F-A 566 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v--f-a 566 (875)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +...... ...+.+.......... .. + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p---------~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP---------CDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC---------ccccccc
Confidence 68999999999999999999999999999999999887 6431110 0011111110000000 00 0 0
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhh--ccCEEecCCChhHHHHHH
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS--ASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~--aADivL~~~~~~~i~~~i 636 (875)
++ ...|..+++.++.....+.|+|||.||.+|.++||+.++-+.-.+.+++ .+.+.+ ++|..+...+
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 01 1248889998887777899999999999999999997773311122222 233333 5577776665
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.05 E-value=7.7e-06 Score=81.91 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=69.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..- ... .+...+ +..+.... ..-....+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~-~~~~~~-~g~~~g~~--------~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FAN-RLEFDD-NGLLTGPI--------EGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eee-eEEECC-CCEEeCcc--------CCcccCCcc
Confidence 4689999999999999999999999999999999999998521 110 000000 00000000 000124468
Q ss_pred HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhC
Q 002832 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA 603 (875)
Q Consensus 572 ~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~A 603 (875)
.|...++.+++. ...+.++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.5e-05 Score=80.48 Aligned_cols=127 Identities=17% Similarity=0.144 Sum_probs=89.6
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.+.++.|++.|+++.++||........+.++.|+.... ...+.++... ...-.|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 468999999999999999999999999999999999999985321 1111111100 011123
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecC----ccHHHhhccCEEecCCChhHHHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~----gtd~ak~aADivL~~~~~~~i~~~i~~ 638 (875)
+--..+.+.++.....+.|+||+.||..|.++|++ +|.+.. ..+.....+|+++ +++..+...+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 33344555555556679999999999999999998 555542 2344556788887 678888887754
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.1e-05 Score=81.57 Aligned_cols=113 Identities=15% Similarity=0.059 Sum_probs=75.9
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCccc-HHHHhhhCcEEEE-e
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALP-VDELIEKADGFAG-V 568 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vfar-~ 568 (875)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++..+. .. +... +.-...++.++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~-~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPA-SF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCc-eE--CCCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999998885321 11121111 00 0000 0000000111111 1
Q ss_pred CHHHHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEE
Q 002832 569 FPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 569 sP~~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
....|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999887 8889999999999999999987554
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.5e-05 Score=80.15 Aligned_cols=108 Identities=16% Similarity=0.093 Sum_probs=76.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEE-EEe
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF-AGV 568 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf-ar~ 568 (875)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..- .........+ ...... +. -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~--g~~~g~----------~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED--GIYTGN----------IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC--CEEeCC----------ccCCCC
Confidence 346899999999999999999999999999999999999998531 1110110000 000000 00 123
Q ss_pred CHHHHHHHHHHHhh-CCC---EEEEEcCCccCHHHHhhCCceEEec
Q 002832 569 FPEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 569 sP~~K~~iV~~lq~-~g~---~Vam~GDG~NDapALk~AdVGIamg 610 (875)
.++.|.+.++.+.+ .|. .+.++||+.||.|+++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 46788888876654 342 5889999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.86 E-value=9.9e-05 Score=76.88 Aligned_cols=126 Identities=17% Similarity=0.223 Sum_probs=94.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccc-ccccccCCcccHHHHhhhCcEEEEe
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG-QNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
..++-|++++++++|+++|++..++|++....+..+.+..|+..-. ..+.| .... ..+-
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~~-----------------~~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDVP-----------------PPKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCCC-----------------CCCc
Confidence 4568899999999999999999999999999999999999996431 11111 1110 1122
Q ss_pred CHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC---ceEEecC--ccHHHhhccCEEecCCChhHHHHHHH
Q 002832 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~Ad---VGIamg~--gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|+....+.+.+....+.+.||||..||..|=|+|+ ||+..|. +.......+|+++ +++..+...+.
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 467777777777666457999999999999999998 6777773 4567777799998 55777766543
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00011 Score=75.65 Aligned_cols=124 Identities=17% Similarity=0.152 Sum_probs=84.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+++++|++.|+++.++||.+...+...-+..|+.... ..++..++. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999988888888888885311 111111110 01122233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-e--c--CccHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-m--g--~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
-=.++.+.++-..+.+.|+||+.+|..|-++|++... + | +..+..++.+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 3344445554445679999999999999999998643 2 3 23345667899987 5566666544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00011 Score=69.34 Aligned_cols=118 Identities=15% Similarity=0.071 Sum_probs=77.4
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ...++....... -..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAI-YYPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhh-hcccccccccccccccCC
Confidence 34568999999999999999999999999999999999999987321 011111100000 000000000011112345
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhh-CCceEE
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK-ADIGIA 608 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~-AdVGIa 608 (875)
-.|+.+..+.+.+....+.+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56777777777777666789999999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0004 Score=74.75 Aligned_cols=125 Identities=15% Similarity=0.156 Sum_probs=81.5
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.++++.|++.|+++.++||-+...+..+.++.|+.... ..++.+++.. ..+-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478999999999999999999999999998888888888874311 1111111100 001112
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecC----ccHHHhhccCEEecCCChhHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~----gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
+-=..+.+.+.-..+.+.|+||+.||..+.++|++ .+++.. ..+..+..+|.++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 22223333333334568999999999999999997 344432 2333455789888 4577766543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00042 Score=71.79 Aligned_cols=124 Identities=18% Similarity=0.137 Sum_probs=83.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+... -..++..++.. ..+-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF--FDVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc--eeEEEecCcCC-----------------CCCCCcH
Confidence 4789999999999999999999999999999998899998532 11112111110 0112234
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce---EEecCc--cHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG---IAVADA--TDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG---Iamg~g--td~ak~aADivL~~~~~~~i~~~i 636 (875)
--.++.+.+.-....+.|+||..+|..|-++|++- +.-|.+ .+.....+|.++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 33444555544445689999999999999999984 333322 223445688876 5677776654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00035 Score=74.22 Aligned_cols=148 Identities=16% Similarity=0.126 Sum_probs=94.2
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-----CCcccccc--cccc--------------
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-----PSSALLGQ--NKDE-------------- 548 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-----~~~~~~~~--~~~~-------------- 548 (875)
..+..|+..++++++++.|+.++.+||......+.+.+++++..... ...+..+. ..+.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 34567899999999999999999999999999999999888754310 00011000 0000
Q ss_pred ---------c-----------------CCccc----H---HHHhhh----CcE-EE-----EeCH--HHHHHHHHHHhhC
Q 002832 549 ---------S-----------------IVALP----V---DELIEK----ADG-FA-----GVFP--EHKYEIVKRLQAR 583 (875)
Q Consensus 549 ---------~-----------------~~~~~----~---~~~~~~----~~v-fa-----r~sP--~~K~~iV~~lq~~ 583 (875)
. ..... + .+.+.+ +.+ ++ .+.| ..|..-++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 00000 1 111111 111 11 3344 4688888887654
Q ss_pred ----CCEEEEEcCCccCHHHHhh-CCceEEecCccHHHhhccC-------EEecCCChhHHHHHHH
Q 002832 584 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 637 (875)
Q Consensus 584 ----g~~Vam~GDG~NDapALk~-AdVGIamg~gtd~ak~aAD-------ivL~~~~~~~i~~~i~ 637 (875)
...|.++||+.||.+|++. ++.|++|+++.+..|+.++ ++-....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 7799999999988886543 4333333455555553
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0006 Score=71.20 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=38.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
.+..-+++.++|++|++.|++++++||..+..+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556668999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00055 Score=70.68 Aligned_cols=122 Identities=15% Similarity=0.130 Sum_probs=79.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+-+...+..+.++.|+.... ..++.+++.. ..+-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57999999999999999999999999999999999999985321 1111111110 0111122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-e--cCc--cHHHhhccCEEecCCChhHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-m--g~g--td~ak~aADivL~~~~~~~i~~ 634 (875)
-=.+..+.+.-....+.|+||..||..|.++|++-.. + |.+ .+.....+|.++ +++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 2233333333334568999999999999999997654 2 322 123334688877 44665543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00042 Score=73.03 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccC----EEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aAD----ivL~~~~~~~i~~~i~ 637 (875)
.|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=.++.++|+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688888877654 3 2588999999999999999999999999999999999 6665656667777765
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0017 Score=67.64 Aligned_cols=119 Identities=14% Similarity=0.175 Sum_probs=78.1
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
-++.|++.++++.|++.|+++.++|+........+.++.|+..-. ..++.+.+.. ..+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP-----------------YSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC-----------------CCCCCH
Confidence 367899999999999999999999999999999999999985321 1122111100 011223
Q ss_pred HHHHHHHHHHhhCC---CEEEEEcCCccCHHHHhhCCceEEec-Cc---cHHHhhccCEEecCCChhHHH
Q 002832 571 EHKYEIVKRLQARK---HICGMTGDGVNDAPALKKADIGIAVA-DA---TDAARSASDIVLTEPGLSVII 633 (875)
Q Consensus 571 ~~K~~iV~~lq~~g---~~Vam~GDG~NDapALk~AdVGIamg-~g---td~ak~aADivL~~~~~~~i~ 633 (875)
+ -+-+.+++.| +.+.|+||..||..|-++|++....- .+ .+.-...+|+++ .+|..+.
T Consensus 152 ~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 E---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred H---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 2 2233344433 45899999999999999999875442 22 222233577776 4465554
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0022 Score=66.58 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=80.5
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.||+.+.+++|++.|+++.++||-....+..+-+..|+.....-..++.+.+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 378999999999999999999999999999999999999985111111222221110 011122
Q ss_pred HHHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEE--ecCcc----HHHhhccCEEecCCChhHHHHH
Q 002832 571 EHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA--VADAT----DAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVGIa--mg~gt----d~ak~aADivL~~~~~~~i~~~ 635 (875)
+-=....+.+.-. ...+.|+||+.+|..|-++|++..+ +..|. +.....+|.++ ++++.+...
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 2222223333322 2569999999999999999999863 33332 12233577776 456665443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0052 Score=65.39 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=84.2
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----------CCcccccccccccCCcccHHHHhh
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------PSSALLGQNKDESIVALPVDELIE 560 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 560 (875)
-++||++.+.++.|++.|+++.++||-....+..+.++.|+..... ....++|.. +.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P------------ 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GP------------ 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CC------------
Confidence 4689999999999999999999999999999999999999853211 011111210 00
Q ss_pred hCcEEEEeCHHHHHHHHHH-----Hh--hCCCEEEEEcCCccCHHHHhhC---CceEEec--Cc-----cHHHhhccCEE
Q 002832 561 KADGFAGVFPEHKYEIVKR-----LQ--ARKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARSASDIV 623 (875)
Q Consensus 561 ~~~vfar~sP~~K~~iV~~-----lq--~~g~~Vam~GDG~NDapALk~A---dVGIamg--~g-----td~ak~aADiv 623 (875)
-+....|.+.+.. ++ .....|.++|||.||.+|-.-. +--+.+| +. -+.=+++=|||
T Consensus 187 ------~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 187 ------LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred ------cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0011345554432 22 2235688999999999996543 2234444 22 23456788999
Q ss_pred ecCCChhHHHHHHH
Q 002832 624 LTEPGLSVIISAVL 637 (875)
Q Consensus 624 L~~~~~~~i~~~i~ 637 (875)
|.+|.=-.++.+|.
T Consensus 261 l~~D~t~~v~~~il 274 (277)
T TIGR01544 261 LVQDETLEVANSIL 274 (277)
T ss_pred EECCCCchHHHHHH
Confidence 99997666666653
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0034 Score=65.33 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=35.8
Q ss_pred CCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 494 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
-+.+.++|++|+++|++++++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0043 Score=66.53 Aligned_cols=138 Identities=11% Similarity=0.091 Sum_probs=83.7
Q ss_pred CCCCChHHHHHHHHh-CCCcEEEEcCCCHHHHHHHHHHhCCC--C-CCC-----CCc----ccc----------------
Q 002832 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMG--T-NMY-----PSS----ALL---------------- 542 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~--~-~~~-----~~~----~~~---------------- 542 (875)
.+-+++.++|++|++ .|++++++||.+........+.+++. . +.. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 355789999999998 79999999999999888887766642 1 100 000 000
Q ss_pred ---cccccc----------cCCc--ccHHHH----hhhCc--------EEEEeCH--HHHHHHHHHHhhC----CCEEEE
Q 002832 543 ---GQNKDE----------SIVA--LPVDEL----IEKAD--------GFAGVFP--EHKYEIVKRLQAR----KHICGM 589 (875)
Q Consensus 543 ---~~~~~~----------~~~~--~~~~~~----~~~~~--------vfar~sP--~~K~~iV~~lq~~----g~~Vam 589 (875)
|...+. ...+ +.+.++ .+... -+-.+.| .+|..-++.+.+. +..|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 0000 001111 11111 1223344 4788888776543 356889
Q ss_pred EcCCccCHHHHhhC----CceEEecCccHHHhhccCEEecCCChhHHHHH
Q 002832 590 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 590 ~GDG~NDapALk~A----dVGIamg~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
+||+.||.+|++.+ +.||+||++. ..|++.|.+ -..+...
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~ 239 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSW 239 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHH
Confidence 99999999999999 9999999865 356787753 4444433
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0028 Score=66.45 Aligned_cols=124 Identities=14% Similarity=0.108 Sum_probs=82.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..++.+.+.. ..+-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTLA-----------------ERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcCC-----------------CCCCCHH
Confidence 57899999999999999999999999988888888888875321 1112111110 1122344
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-e--cCc--c-HHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--ADA--T-DAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-m--g~g--t-d~ak~aADivL~~~~~~~i~~~i 636 (875)
-=..+.+.+.-....+.|+||+.||..|-++|++-.. + |.+ . ......+|+++ +++..+.+..
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 4445555565555679999999999999999997642 3 321 1 12234689988 5566665544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0057 Score=65.76 Aligned_cols=121 Identities=14% Similarity=0.101 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+++. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F--~~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF--SVVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe--EEEEecCCC------------------C--CCHH
Confidence 57899999999999999999999999999999999999985321 111111110 0 0122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ecCc--cH--HHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA--TD--AARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg~g--td--~ak~aADivL~~~~~~~i~~~i 636 (875)
-=..+++.++-....++|+||+.+|..|-++|++-.. +..| +. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1122223333234568999999999999999997543 2222 22 3344689987 6677777654
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0071 Score=64.99 Aligned_cols=93 Identities=14% Similarity=0.084 Sum_probs=62.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++-|++.++++.|++.|+++.++||.....+..+-+..|+..-. ...++.+++.. ..+-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcCC-----------------CCCCChH
Confidence 56899999999999999999999999988887777777764211 11122221110 0111222
Q ss_pred HHHHHHHHHhhCC----CEEEEEcCCccCHHHHhhCCc
Q 002832 572 HKYEIVKRLQARK----HICGMTGDGVNDAPALKKADI 605 (875)
Q Consensus 572 ~K~~iV~~lq~~g----~~Vam~GDG~NDapALk~AdV 605 (875)
- +.+.+++.| ..+.|+||..+|..|-++|++
T Consensus 163 ~---~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 M---ALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred H---HHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 2 334444433 468999999999999999996
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0059 Score=65.19 Aligned_cols=121 Identities=17% Similarity=0.098 Sum_probs=79.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.+++|++.|+++.++|+.....+..+-+.+|+..- -..++.+.+.. ..+-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 5689999999999999999999999999999998888998532 12233332211 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-Ee-cCccHHHhhccCEEecCCChhHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVII 633 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGI-am-g~gtd~ak~aADivL~~~~~~~i~ 633 (875)
-=....+.+.-....+.|+||..+|..|-++|++-. ++ |.++......+|.++ ++++.+.
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~ 231 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLS 231 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHH
Confidence 223334444444456899999999999999999843 33 322222233578776 4455543
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0092 Score=59.69 Aligned_cols=145 Identities=21% Similarity=0.243 Sum_probs=96.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccccccc-------c------cCCcccHHHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD-------E------SIVALPVDEL 558 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~ 558 (875)
++-|++.++.+.|++ -...+++|--..+-+.++|..+|++........+.-++.. + ..+..+-+++
T Consensus 83 ~lvPgA~etm~~l~~-~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQE-RWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhc-cCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 457999999999974 4567777778888899999999996432211111111000 0 0111111222
Q ss_pred hhhCc-EEEEeCHHHHHHHHHHHhhC------------------CCEEEEEcCCccCHHHHhhCC--ceEEec-CccHHH
Q 002832 559 IEKAD-GFAGVFPEHKYEIVKRLQAR------------------KHICGMTGDGVNDAPALKKAD--IGIAVA-DATDAA 616 (875)
Q Consensus 559 ~~~~~-vfar~sP~~K~~iV~~lq~~------------------g~~Vam~GDG~NDapALk~Ad--VGIamg-~gtd~a 616 (875)
.++.+ +|.|..|..-.+|++..+.- ....+.+||.+.|..||+.+. =|+|+. +|.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 22222 58888887655555544422 234688999999999999885 358887 899989
Q ss_pred hhccCEEecCCChhHHHHHHH
Q 002832 617 RSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 617 k~aADivL~~~~~~~i~~~i~ 637 (875)
..-||+.+..++..+....|+
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 889999999999888887775
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.009 Score=63.58 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=66.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++||.....+..+-++.|+.... ...++.+++.. ..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC-----------------CCCCCHH
Confidence 56899999999999999999999999999999888888875321 11222222111 0111233
Q ss_pred HHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCce
Q 002832 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVG 606 (875)
-=....+.+.-. .+.+.|+||..+|..|-++|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 323333333321 34589999999999999999964
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0069 Score=62.59 Aligned_cols=106 Identities=13% Similarity=0.051 Sum_probs=74.5
Q ss_pred CCCCChHHHH-HHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEE-EEeC
Q 002832 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF-AGVF 569 (875)
Q Consensus 492 ~lr~~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf-ar~s 569 (875)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+... .. +.+.+++.... -.+. ..|.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~-~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VN-LIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---Cc-eEEEEEEEEEc----------cEECCccCC
Confidence 4589999999 578889999999999999999999999996210 01 11222211000 0011 2356
Q ss_pred HHHHHHHHHHH-hhCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 570 PEHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 570 P~~K~~iV~~l-q~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
-+.|.+-++.. .......-+=||..||.|+|+.|+-.++++.
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 68999877754 3333445578999999999999999999974
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.01 Score=63.07 Aligned_cols=116 Identities=13% Similarity=0.128 Sum_probs=78.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+-+...+...-+.+|+... -..++.+++.. ..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF--FQAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh--CcEEEecCcCC-----------------CCCCChH
Confidence 5789999999999999999999999999999999999998532 12233332211 1122344
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ecCc---cHHHhhccCEEecC
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA---TDAARSASDIVLTE 626 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg~g---td~ak~aADivL~~ 626 (875)
-=....+.+.-....+.|+||..+|..|-++|++-.. +..| .+.....+|.++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 4444455555445668999999999999999987432 2222 12223468888744
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0066 Score=62.64 Aligned_cols=106 Identities=11% Similarity=0.034 Sum_probs=74.0
Q ss_pred CCCCChHHHHH-HHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcE-EEEeC
Q 002832 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG-FAGVF 569 (875)
Q Consensus 492 ~lr~~~~~~I~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-far~s 569 (875)
.++|++.+.|+ .+++.|++++++|+=....+..+|+..|+... ..++ +.+++.. +. -.+ =..|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~-~g---------g~~~g~~c~ 159 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERG-NG---------GWVLPLRCL 159 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEe-CC---------ceEcCccCC
Confidence 46999999996 78989999999999999999999998665321 0111 2222100 00 001 12356
Q ss_pred HHHHHHHHHHHh-hCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 570 PEHKYEIVKRLQ-ARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 570 P~~K~~iV~~lq-~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
-++|.+-++..- ......-+=||..||.|+|+.||-.++++.
T Consensus 160 g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 160 GHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred ChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 689998776543 223345578999999999999999999873
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0028 Score=64.72 Aligned_cols=94 Identities=18% Similarity=0.099 Sum_probs=68.2
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeC
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s 569 (875)
.+++.++++++++.|++.|+++.++||-....+..+-+..|+..-. ..++.+++ +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 4557788899999999999999999999999999999999985321 11221111 111334
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 002832 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (875)
Q Consensus 570 P~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~A 603 (875)
|+--..+.+.+.-....+.|+||+.+|..|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5555556666665566799999999999887765
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.011 Score=69.90 Aligned_cols=48 Identities=8% Similarity=0.071 Sum_probs=39.5
Q ss_pred EEeccCCC-CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
|.+.-.|. .-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44444333 3457899999999999999999999999999999999873
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.015 Score=61.95 Aligned_cols=42 Identities=7% Similarity=0.022 Sum_probs=38.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (875)
..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999853
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0061 Score=63.74 Aligned_cols=89 Identities=19% Similarity=0.228 Sum_probs=62.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
.|.|++++.++.+++.|+++.++||. ...++..+.+..|++........+.|+..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 46788999999999999999999995 36799999998999532111222222110
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
.-.+|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 173 -~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0133444 344444 488999999999999999874
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0042 Score=70.75 Aligned_cols=48 Identities=23% Similarity=0.207 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhC----C---CEEEEEcCCccCHHHHhhCC-ceEEecCccHHHhhc
Q 002832 572 HKYEIVKRLQAR----K---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSA 619 (875)
Q Consensus 572 ~K~~iV~~lq~~----g---~~Vam~GDG~NDapALk~Ad-VGIamg~gtd~ak~a 619 (875)
.|..-++.|.+. | ..|..+||+.||.+||+.|+ .||+|+++.+..|+.
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~ 230 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQW 230 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHH
Confidence 488777777654 2 37899999999999999999 699999999988874
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.014 Score=60.62 Aligned_cols=113 Identities=14% Similarity=0.131 Sum_probs=71.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+...-+..|+... ..++.+++.. ..+-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---EVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---cEEEEHHHhc-----------------CCCCCcH
Confidence 5789999999999999999999999887666665566676321 1122111100 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCcc-HHHhhccCEEe
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVL 624 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~gt-d~ak~aADivL 624 (875)
-=....+.+.-....+.|+||..+|..|-++|++- |++..+. +.....+|.++
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 197 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL 197 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe
Confidence 32333344433446799999999999999999984 5554332 22334577776
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0099 Score=60.95 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (875)
++.+++.+++++|++.|++++++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999998888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.012 Score=68.48 Aligned_cols=123 Identities=11% Similarity=0.096 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ..++.+++.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 68899999999999999999999999999999999999885321 1222222111 011233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecC--ccHHHhhccCEEecCCChhHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~--gtd~ak~aADivL~~~~~~~i~~~i~~ 638 (875)
-=....+.++ ...+.|+||..+|..|-++|++ .|++.. +.+-....+|+++ ++++.+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 2222222222 3468999999999999999997 344432 2222234588887 567777766543
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0061 Score=59.13 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=68.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
.++|+-++.++.+++.+|+++++|+--......+=++++=........+...+. . ....-...++...+ ..--.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~-~--ih~dg~h~i~~~~d---s~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND-Y--IHIDGQHSIKYTDD---SQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc-e--EcCCCceeeecCCc---cccCC
Confidence 579999999999999999999999877655555555544111100000100000 0 00000000000000 11125
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
+|...|+.+++..+.+-|||||+.|..|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 7999999999999999999999999998887777554
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.015 Score=60.35 Aligned_cols=98 Identities=18% Similarity=0.192 Sum_probs=65.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 570 (875)
++.|++.+++++|++.|+++.++|+-+...+...-+.+|+.... ..++.+.+ ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 57899999999999999999999998887777777888874211 11222211 111223
Q ss_pred -HHHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc-eEEec
Q 002832 571 -EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVA 610 (875)
Q Consensus 571 -~~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdV-GIamg 610 (875)
+-=....+.+.-....+.|+||.. +|..+-++|++ .|.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 222223333333345689999998 99999999987 34444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.025 Score=56.83 Aligned_cols=128 Identities=20% Similarity=0.112 Sum_probs=71.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCCcccccccccccCCcccHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (875)
++.||+.+++++|++.|+++.++|..+.. ....+-++.|+.-. .++...... ..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~----~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHP----EDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCC----CCC--
Confidence 46899999999999999999999987621 11122233444210 111100000 000
Q ss_pred HHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ecCccH---HHhhcc--CEEecCCChh
Q 002832 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADATD---AARSAS--DIVLTEPGLS 630 (875)
Q Consensus 557 ~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg~gtd---~ak~aA--DivL~~~~~~ 630 (875)
.-..+-.|+--....+.+.-..+.+.|+||..+|..+-++|++-.- +..|.. .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 0011223444444555555445679999999999999999997422 223321 112235 7776 4577
Q ss_pred HHHHHHH
Q 002832 631 VIISAVL 637 (875)
Q Consensus 631 ~i~~~i~ 637 (875)
.+...+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 6666543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.017 Score=58.87 Aligned_cols=94 Identities=15% Similarity=0.161 Sum_probs=64.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+++++|++.|+++.++|+-+........+.+|+.... ..++..++. .+..|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~-------------------~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADAV-------------------RAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhhc-------------------CCCCCC
Confidence 57899999999999999999999998888888888888874221 112221111 111232
Q ss_pred H--HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 572 H--KYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~--K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
. =..+.+.+.-....+.|+||+.+|..+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 1 1233334433345688999999999999988875
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.053 Score=66.85 Aligned_cols=170 Identities=18% Similarity=0.203 Sum_probs=99.0
Q ss_pred HHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEecc--CCCCCCChHHHHHHHHh-CCCcEEEEcCCCHHHHHH
Q 002832 448 HAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKE 524 (875)
Q Consensus 448 ~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~--~D~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ 524 (875)
+...+.+...-.|.+++-+.. |++....- ...+-+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344555666667888777654 44432111 12366799999999999 699999999999988877
Q ss_pred HHHHhCCC--C-CCC----CCc---cccc----------------------ccccc---c------CCcccH--------
Q 002832 525 TGRRLGMG--T-NMY----PSS---ALLG----------------------QNKDE---S------IVALPV-------- 555 (875)
Q Consensus 525 ia~~lGi~--~-~~~----~~~---~~~~----------------------~~~~~---~------~~~~~~-------- 555 (875)
.....++. . +.. ... .... ...+. . ..+.++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 66544431 0 000 000 0000 00000 0 000111
Q ss_pred HHHhhh------CcE-----EEEeCH--HHHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhC---CceEEecCccHHHh
Q 002832 556 DELIEK------ADG-----FAGVFP--EHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 617 (875)
Q Consensus 556 ~~~~~~------~~v-----far~sP--~~K~~iV~~lq~~--g~~Vam~GDG~NDapALk~A---dVGIamg~gtd~ak 617 (875)
.+.+.. ..+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 111 113334 5798888888764 24799999999999999997 588888874 4
Q ss_pred hccCEEecCCChhHHHHHH
Q 002832 618 SASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 618 ~aADivL~~~~~~~i~~~i 636 (875)
.+|++.|.+. ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 5788888653 4444433
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.0091 Score=62.50 Aligned_cols=88 Identities=19% Similarity=0.207 Sum_probs=61.4
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
+.+++++.++.+++.|+++.++|+- ...++..+.+.+|+... ...++.++... .-
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC-------------------CC
Confidence 4555999999999999999999997 67799999999999531 11222221110 00
Q ss_pred CHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
.| +|. ..+++.| .+.|+||..||..|-++|++-
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 12 232 2445555 478999999999999999864
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.022 Score=62.32 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=76.3
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
...+++.|++.+++++|++.|+++.++||.....+..+.+.+|+..... ..+.+.+. ....+.... --+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~~-~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQG-DKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccCC-CCC
Confidence 3568899999999999999999999999999999999999998853111 11111110 000000000 024
Q ss_pred eCHHHHHHHHHHHhh-CCCEEEEEcCCccCHHHHhhCCceE
Q 002832 568 VFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGI 607 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~-~g~~Vam~GDG~NDapALk~AdVGI 607 (875)
-.|+-|....+.+-. .-..+.|+||..||+.+-++|++-.
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 447777877776544 3367999999999999999999864
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.035 Score=55.42 Aligned_cols=98 Identities=9% Similarity=0.013 Sum_probs=58.5
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHH--------HHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcE
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG 564 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~--------tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (875)
+.|++++++++|++.|+++.++|+.... .....-+..|+..-. ......+++..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~----------------- 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-LCPHKHGDGCE----------------- 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-ECcCCCCCCCC-----------------
Confidence 6899999999999999999999987631 122223344542100 00000000000
Q ss_pred EEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 565 far~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
..+-.|+-=.++.+.+...-+.+.|+||..+|..|=++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222333344444444344569999999999999999997544
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.013 Score=58.76 Aligned_cols=94 Identities=12% Similarity=0.040 Sum_probs=58.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|+++|+++.++|+... +...-+.+|+.... ..++.+.+.. ..+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK-----------------KGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC-----------------CCCCChH
Confidence 6789999999999999999999997532 34566777774221 1122111110 1111222
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
-=....+.+.-....+.|+||..+|+.|-++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 21223333332334588999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.034 Score=60.31 Aligned_cols=122 Identities=18% Similarity=0.138 Sum_probs=72.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+-+......+-+..+...-...-..+.+.+.. ..+-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 57899999999999999999999998877766655544321100000111111100 0112233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-Ccc--HHHhhccCEEecCCChhHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DAT--DAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gt--d~ak~aADivL~~~~~~~i 632 (875)
-=..+.+.+.-....+.|+||+.+|..|-++|++....- .|. .-....+|+++ +++..+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l 268 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDV 268 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhc
Confidence 223344444444556999999999999999999765442 332 11123578877 444443
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.036 Score=52.46 Aligned_cols=92 Identities=16% Similarity=0.162 Sum_probs=62.6
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCC--------HHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhC
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (875)
-++.|++.+++++|+++|+++.++|+.. .....++.+.+|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3678999999999999999999999988 67777888888874210 00100 0
Q ss_pred cEEEEeCHHHHHHHHHHHh-hCCCEEEEEcC-CccCHHHHhhCCc
Q 002832 563 DGFAGVFPEHKYEIVKRLQ-ARKHICGMTGD-GVNDAPALKKADI 605 (875)
Q Consensus 563 ~vfar~sP~~K~~iV~~lq-~~g~~Vam~GD-G~NDapALk~AdV 605 (875)
..+-.|+-=..+.+.++ -..+.+.|+|| -.+|..+-++|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 01112222234444442 34467999999 5899999998875
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.034 Score=57.67 Aligned_cols=121 Identities=11% Similarity=0.066 Sum_probs=74.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+++|++.+.+++|++. +++.++|+-....+..+-++.|+.... ..++.+.+.. ..+-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG-----------------IQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC-----------------CCCCCHH
Confidence 5789999999999999 999999999888888888888885321 1121111100 0111122
Q ss_pred HHHHHHHHH-hhCCCEEEEEcCCc-cCHHHHhhCCc-eEEecC--ccHHHhhccCEEecCCChhHHHH
Q 002832 572 HKYEIVKRL-QARKHICGMTGDGV-NDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 572 ~K~~iV~~l-q~~g~~Vam~GDG~-NDapALk~AdV-GIamg~--gtd~ak~aADivL~~~~~~~i~~ 634 (875)
-=....+.+ .-....+.|+||.. +|..+=+++++ +|.... .+......+|.++ ++++.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 112333333 22234689999998 89999999996 333332 2222223466666 44665554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.031 Score=58.35 Aligned_cols=99 Identities=10% Similarity=-0.015 Sum_probs=65.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 570 (875)
++.|++.+.++.|++.|+++.++|+-+...+...-+..|+... -..++.+.+. .+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~iv~s~~~-------------------~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH--LDLLLSTHTF-------------------GYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH--CCEEEEeeeC-------------------CCCCCC
Confidence 6789999999999999999999999888888777777777421 1112211111 11122
Q ss_pred -HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce--EEecC
Q 002832 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVAD 611 (875)
Q Consensus 571 -~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG--Iamg~ 611 (875)
+-=....+.+.-....+.|+||..+|..|-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 221222233333345689999999999999999996 44443
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.059 Score=60.22 Aligned_cols=120 Identities=15% Similarity=0.121 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||..- -..++.+++.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC-----------------CCCCCHH
Confidence 4679999999999999999999999999999999899998532 11222222110 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe-cCccHHHh-hccCEEecCCChhHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADATDAAR-SASDIVLTEPGLSVI 632 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam-g~gtd~ak-~aADivL~~~~~~~i 632 (875)
-=....+.+.-....+.|+||..+|..|-++|++-... ..+.+... ..||+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 33444555554567799999999999999999975332 33332222 3588876 445554
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.039 Score=55.13 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=62.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.+++|++.|+++.++|+-.... ..+..++|+... -..++.+.+.. ...-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~~-----------------~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDVG-----------------RGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCCC-----------------CCCCCHH
Confidence 678999999999999999999999988776 555555777421 11122111110 1111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV 605 (875)
-=..+.+.+.-....+.|+||...|..|-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 3344444444445678999999999999888876
|
HAD subfamilies caused by an overly broad single model. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.011 Score=58.17 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=68.7
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.+.+++|++.|++++++|+-+........+++|+..- ...++...+... .+-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~~-----------------~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVGS-----------------RKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSSS-----------------STTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhhh-----------------hhhHH
Confidence 36789999999999999999999999999999999999998521 122222221110 01112
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
+-=..+.+.+.-..+.+.|+||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 333445555554556799999999999999988864
|
... |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.035 Score=57.81 Aligned_cols=103 Identities=22% Similarity=0.254 Sum_probs=67.2
Q ss_pred CCCCChHHHHHHH--HhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccc-cccc--cCCcccHHHHhhhCcEEE
Q 002832 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ-NKDE--SIVALPVDELIEKADGFA 566 (875)
Q Consensus 492 ~lr~~~~~~I~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~vfa 566 (875)
|+.|+.++.++.| ++.|+.++++|--|..--..+=+.-|+.... ..+.+.. ..+. .+.-.+... +-+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~pyh~-----h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPYHS-----HGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCccC-----CCCC
Confidence 7789999999999 5689999999999987777777777875321 1122111 0110 000001111 1244
Q ss_pred EeCH-HHHHHHHHHHhhC----C---CEEEEEcCCccC-HHHHh
Q 002832 567 GVFP-EHKYEIVKRLQAR----K---HICGMTGDGVND-APALK 601 (875)
Q Consensus 567 r~sP-~~K~~iV~~lq~~----g---~~Vam~GDG~ND-apALk 601 (875)
+|.| .=|..+++.+++. | ..|.++|||.|| ||+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 5655 4799999988865 4 689999999999 56654
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.029 Score=56.29 Aligned_cols=92 Identities=13% Similarity=0.117 Sum_probs=59.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+- ..+..+-+..|+..-. ..++.+.+. .+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~~-------------------~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADEV-------------------KEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhhC-------------------CCCCCC
Confidence 68999999999999999999999986 5566777778874210 111111110 011232
Q ss_pred HH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 572 HK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~K--~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
.. ....+.+.-..+.+.|+||..+|..+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11 122233322335588999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.076 Score=55.23 Aligned_cols=123 Identities=14% Similarity=0.097 Sum_probs=74.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+++++|+ .|+++.++|+.....+...-++.|+.... ..++.+.+.. ...-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~-----------------~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQVG-----------------VAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECccC-----------------CCCCCHH
Confidence 47899999999999 68999999998888887777778874210 1111111110 0011122
Q ss_pred HHHHHHHHHhhC-CCEEEEEcCCc-cCHHHHhhCCce-EEec-CccH-HHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQAR-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~-g~~Vam~GDG~-NDapALk~AdVG-Iamg-~gtd-~ak~aADivL~~~~~~~i~~~i 636 (875)
-=..+++.+.-. .+.+.|+||.. +|..+=++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 222333333321 24699999998 799999999985 4443 2221 1112467777 4566666543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.11 Score=51.01 Aligned_cols=102 Identities=16% Similarity=0.229 Sum_probs=65.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCCcccccccccccCCcccHHHHhhh
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (875)
+|.+.|+++++++++++.|++++.+||.....+. ....++ | ++. ..++....- .... ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~-------~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDR-------LFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCc-------chhh-hhc
Confidence 4788999999999999999999999999987764 444442 2 321 111110000 0000 000
Q ss_pred CcEEEEeCHH-HHHHHHHHHhh-----CCCEEEEEcCCccCHHHHhhCCc
Q 002832 562 ADGFAGVFPE-HKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADI 605 (875)
Q Consensus 562 ~~vfar~sP~-~K~~iV~~lq~-----~g~~Vam~GDG~NDapALk~AdV 605 (875)
.+. .-.|+ .|...++.+++ ....++..||+.+|+.|-++++|
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 112 22343 48888887776 34678889999999999988765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.06 Score=53.59 Aligned_cols=108 Identities=7% Similarity=-0.054 Sum_probs=67.8
Q ss_pred EeccCCCCCCChHHHHHHHHhCCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcE
Q 002832 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG 564 (875)
Q Consensus 486 ~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (875)
...-+-+++|++.+.++.|+++|+++.++|+- ....+..+-..+|+..... ...+....+ ..+
T Consensus 39 ~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~iv 102 (174)
T TIGR01685 39 KSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-DRI 102 (174)
T ss_pred CCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-eee
Confidence 33444568899999999999999999999965 8888888888888741000 000000000 001
Q ss_pred EEEeCHHHH--HHHHHHHhhC------CCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 565 FAGVFPEHK--YEIVKRLQAR------KHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 565 far~sP~~K--~~iV~~lq~~------g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
.+.-.+..| ..+.+.+.+. -..+.|+||...|+.|-++|++-...
T Consensus 103 ~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 103 EIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 111111112 2344544432 25689999999999999999876544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.072 Score=60.25 Aligned_cols=114 Identities=18% Similarity=0.160 Sum_probs=70.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH-HhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR-RLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+.++.|++.|+++.++|+-....+...-+ ..|+... -..++.+++.. ...-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--Fd~ii~~d~v~-----------------~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES--FSVIVGGDEVE-----------------KGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--CCEEEehhhcC-----------------CCCCCH
Confidence 467999999999999999999999998877766554 5666321 11122211110 011122
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ecCc--cHHHhhccCEEe
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA--TDAARSASDIVL 624 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg~g--td~ak~aADivL 624 (875)
+-=.+..+.+.-..+.+.|+||..+|..|-++|++-.. +..+ .+.....+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 32233344444345679999999999999999997643 3332 222333466655
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.13 Score=51.44 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=24.0
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCC
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQ 518 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~ 518 (875)
+.|++.+++++|+++|+++.++|.-+
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.12 Score=54.81 Aligned_cols=45 Identities=27% Similarity=0.320 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 615 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ 615 (875)
..|..-|+.|+++ | +.|..+||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 5799999988875 2 3466799999999999999999999987776
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.15 Score=49.19 Aligned_cols=109 Identities=12% Similarity=0.181 Sum_probs=76.1
Q ss_pred HHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 002832 451 IDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (875)
Q Consensus 451 ~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (875)
.+.+.++|.+.+.+-..+ +++..= ....-|++++=+++++.+|+++.++|.-++..+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 567889999998775443 333321 12356788888999999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhC---CCEEEEEcCCc-cCHHHHhhCCc
Q 002832 531 MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR---KHICGMTGDGV-NDAPALKKADI 605 (875)
Q Consensus 531 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~---g~~Vam~GDG~-NDapALk~AdV 605 (875)
++- ++--..|-- ..+-+++++. -+.|+|+||-. .|+-+=+.|++
T Consensus 85 v~f------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 852 111122333 2345666655 45799999986 67766555543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.069 Score=51.68 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=58.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (875)
++.|++.++++.|++.|+++.++|+.+. .....+.+.+|+.... .........+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~~-------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG---VLFCPHHPAD-------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE---EEECCCCCCC--------
Confidence 4789999999999999999999998652 3455566777774110 0000000000
Q ss_pred HHhhhCcEEEEeCHHHH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 557 ~~~~~~~vfar~sP~~K--~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
....+ .|+-+ ..+.+.+.-..+.+.|+||...|..+-++|++-
T Consensus 96 ------~~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 96 ------NCSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ------CCCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00001 23221 222233332335699999999999998888764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.2 Score=55.96 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=47.5
Q ss_pred EEeCHH---HHHHHHHHHhhC-C-----C-EEEEEcCCccCHHHHhh-----CCceEEecCccHHHhhccCEEecCCChh
Q 002832 566 AGVFPE---HKYEIVKRLQAR-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLS 630 (875)
Q Consensus 566 ar~sP~---~K~~iV~~lq~~-g-----~-~Vam~GDG~NDapALk~-----AdVGIamg~gtd~ak~aADivL~~~~~~ 630 (875)
-.+.|. +|..-|+.+.+. | . .+.++||+.||-.|++. +++||+|++|.... .|++-|-+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HH
Confidence 355664 899888877654 2 1 35899999999999996 68999999765433 57787744 45
Q ss_pred HHHHHH
Q 002832 631 VIISAV 636 (875)
Q Consensus 631 ~i~~~i 636 (875)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 554444
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.11 Score=53.11 Aligned_cols=94 Identities=14% Similarity=0.075 Sum_probs=57.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++-|++.++++.|++.|+++.++|+-... ....-+.+|+.... ..++...+.. ..+-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~~-----------------~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEVG-----------------AEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecccC-----------------CCCCCHH
Confidence 57899999999999999999999976554 45666777773211 1111111100 0111222
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc
Q 002832 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADI 605 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdV 605 (875)
-=..+.+.+.-....+.|+||.. +|..+-++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11223333333345799999997 89998888875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.034 Score=58.95 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhCCCEEEEEcC----CccCHHHHhhC-CceEEecCccHHHhhccCEEe
Q 002832 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 624 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GD----G~NDapALk~A-dVGIamg~gtd~ak~aADivL 624 (875)
-+|..-++.|.+..+-|+.+|| |-||.+||+.| -.|++++++++..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 5799999998887788999999 99999999987 688999999999998776543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.14 Score=50.97 Aligned_cols=108 Identities=12% Similarity=0.134 Sum_probs=70.3
Q ss_pred HHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCC-HHHHHHHHHHhCCC
Q 002832 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMG 532 (875)
Q Consensus 454 ~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 532 (875)
+.+.|.+.+.+-... ++.- .=...+-|++.+++++|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~--~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVY--PDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------cccc--CCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 445788887776432 1110 0123578999999999999999999999987 57777777877763
Q ss_pred CCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH--HHHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce
Q 002832 533 TNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP--EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (875)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP--~~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVG 606 (875)
.. +....| +-=..+.+.+.-....+.|+||.. .|..+-++|++-
T Consensus 85 ~~------------------------------~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL------------------------------PHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE------------------------------cCCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 10 000122 211122222222344599999998 799999999873
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.55 Score=49.52 Aligned_cols=94 Identities=16% Similarity=0.193 Sum_probs=59.2
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHH--HHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhC
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK--ETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (875)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. +..+++|+..+. ...++
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii--------------------- 74 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMII--------------------- 74 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEE---------------------
Confidence 555566788999999999999999999999985543333 455777875310 01111
Q ss_pred cEEEEeCHHHHHHHHHHHhh---CCCEEEEEcCCccCHHHHhhCC
Q 002832 563 DGFAGVFPEHKYEIVKRLQA---RKHICGMTGDGVNDAPALKKAD 604 (875)
Q Consensus 563 ~vfar~sP~~K~~iV~~lq~---~g~~Vam~GDG~NDapALk~Ad 604 (875)
+.- ......+.+.+++ .+..+.++||+.+|...+..++
T Consensus 75 ---~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 75 ---SSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---ccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 100 0001122222333 2467999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.085 Score=51.22 Aligned_cols=91 Identities=20% Similarity=0.163 Sum_probs=56.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+..+++.+.++.|++.|+++.++|+-....+...-+.. +... ...++..++ +..+-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~~~~~------------------~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLILGSDE------------------FGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEEecCC------------------CCCCcCHH
Confidence 34589999999999999999999999988888777764 3211 011111100 01111222
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~Ad 604 (875)
-=..+.+.+.-.. .+.|+||..+|..|-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2222233333234 6899999999999887764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.12 Score=50.80 Aligned_cols=99 Identities=14% Similarity=0.044 Sum_probs=58.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (875)
++-|++.+++++|++.|+++.++|.- ....+..+.+..|+.- ...+.+.... ..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f----d~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF----DDVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce----eEEEECCCCC----CC---
Confidence 46789999999999999999999974 2345566677777741 0111110000 00
Q ss_pred HHhhhCcEEEEeCHHHH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 557 ~~~~~~~vfar~sP~~K--~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
.... ..|... ..+.+.+.-....+.|+||+.+|..+-++|++-..
T Consensus 98 ------~~~~-~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------NCDC-RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------CCCC-CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0001 123211 12222222122458999999999999999987644
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.35 Score=51.57 Aligned_cols=86 Identities=15% Similarity=0.104 Sum_probs=57.3
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCH---HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEE
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQL---AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~---~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa 566 (875)
..++-|++.+.++.+++.|+++.++|+-.. ..+...-++.|+...... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 346789999999999999999999999763 333345566787532111 1222
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHH
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapAL 600 (875)
|-....|..-.+.+.+...+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2112235555555655667899999999997643
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.19 Score=52.20 Aligned_cols=98 Identities=13% Similarity=0.118 Sum_probs=57.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHH-HHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeC-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKE-TGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF- 569 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~-ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s- 569 (875)
++.|++.+.|+.|++.|+++.++||-+...... ..+..|+..- ...++.+.+.+ +.+..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~~~~-----------------~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGDDPE-----------------VKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECChhh-----------------ccCCCC
Confidence 578999999999999999999999987643322 2222233210 01112111000 01111
Q ss_pred -HHHHHHHHHHHh---hCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 570 -PEHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 570 -P~~K~~iV~~lq---~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
|+-=...++.+. -..+-+.|+||...|+.|-++|++-..
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 222223334342 223569999999999999999997543
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.11 Score=50.33 Aligned_cols=93 Identities=17% Similarity=0.019 Sum_probs=64.2
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+... ....++.+++.. +..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~-------------------~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV-------------------FVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc-------------------ccCC
Confidence 357999999999999 5799999999999999999998887421 111222222111 1122
Q ss_pred HHHHHHHHHHhh---CCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 571 EHKYEIVKRLQA---RKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 571 ~~K~~iV~~lq~---~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
. +.+.+++ ..+.+.|+||..+|..|-++|.|-|.
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 3444443 34679999999999998877766554
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.22 Score=55.34 Aligned_cols=97 Identities=12% Similarity=0.066 Sum_probs=58.1
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPV 555 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~ 555 (875)
-++.|++.+++++|+++|+++.++|+= ....+..+.+..|+.- ..++.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~----sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFP----ED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcC----cc--
Confidence 367999999999999999999999982 1234555666666631 0111100000 00
Q ss_pred HHHhhhCcEEEEeCHHHHHHHHHH-Hhh---CCCEEEEEcCCccCHHHHhhCCceE
Q 002832 556 DELIEKADGFAGVFPEHKYEIVKR-LQA---RKHICGMTGDGVNDAPALKKADIGI 607 (875)
Q Consensus 556 ~~~~~~~~vfar~sP~~K~~iV~~-lq~---~g~~Vam~GDG~NDapALk~AdVGI 607 (875)
...+| .|+ -.++.. +++ ....+.|+||+.+|..+-+.|++-.
T Consensus 99 -------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00011 232 222322 222 2367999999999999999998754
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.22 Score=52.70 Aligned_cols=66 Identities=21% Similarity=0.207 Sum_probs=47.3
Q ss_pred EeCHHHHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhC--------CceEEecCccHHHhhccCEEecCCChhHHHH
Q 002832 567 GVFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~A--------dVGIamg~gtd~ak~aADivL~~~~~~~i~~ 634 (875)
+-.+.+|...++.+.+. ...+.|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHH
Confidence 34456788877776544 34789999999999999999 4788886443 3567888884 4565555
Q ss_pred HH
Q 002832 635 AV 636 (875)
Q Consensus 635 ~i 636 (875)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.36 Score=50.12 Aligned_cols=99 Identities=12% Similarity=0.049 Sum_probs=64.1
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC---CCCCCCCCcccccccccccCCcccHHHHhhhCcEEE
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG---MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa 566 (875)
+-++.||+.+++++|+++|+++.++|..+......+-+..+ +..- +. ... +..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f~--------------~~f-d~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------FS--------------GYF-DTTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------cc--------------eEE-EeCccc
Confidence 35789999999999999999999999988776666554432 2110 00 000 001111
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
.-.|+-=..+.+.+.-..+.+.|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2223333444455544446689999999999999999986543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.52 Score=48.90 Aligned_cols=87 Identities=18% Similarity=0.267 Sum_probs=55.2
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHH---HHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---AKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t---A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
-|.-|++.++++.+++.|++|+++||..... ..+--++.|+.. .....+.+.+-+ ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------Cc
Confidence 3788999999999999999999999999644 222223457642 111122111000 00
Q ss_pred eCHHHHHHHHHHHhhCCC-EEEEEcCCccCH
Q 002832 568 VFPEHKYEIVKRLQARKH-ICGMTGDGVNDA 597 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~-~Vam~GDG~NDa 597 (875)
..-+-|...=+.+.+.|+ +++.+||-.+|-
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 011227676667777765 679999999985
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=91.53 E-value=0.93 Score=58.10 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=76.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 570 (875)
.+.|++.+.+++|+++|+++.++|+-....+..+-++.|+.... -..++.+++ +.+..|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-Fd~iv~~~~-------------------~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-FDAIVSADA-------------------FENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-CCEEEECcc-------------------cccCCCC
Confidence 36799999999999999999999999888888888888884110 112222211 112223
Q ss_pred -HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecCc---cHHHhhccCEEecC
Q 002832 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARSASDIVLTE 626 (875)
Q Consensus 571 -~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~g---td~ak~aADivL~~ 626 (875)
+-=.+..+.+.-..+.+.|+||..+|+.|-++|++ -|++..+ .+.....+|+++-+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22233444444445678999999999999999997 3334332 33344567888844
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.49 Score=44.58 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=34.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC-CHHHHHHHHHHhC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLG 530 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lG 530 (875)
++.|++.+.++.|++.|+++.++|+- .+..+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666665
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.93 Score=45.34 Aligned_cols=50 Identities=22% Similarity=0.355 Sum_probs=41.7
Q ss_pred eEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH---HhCC
Q 002832 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR---RLGM 531 (875)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~---~lGi 531 (875)
.+-|.+.++|..-|++.++++.|++++.+|.-+|.-..+.-+.+.+ +||+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4669999999999999999999999999999999877665555554 4565
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=91.04 E-value=0.6 Score=46.03 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=72.5
Q ss_pred HHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCc--EEEEcCC-------CHHHHHH
Q 002832 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIAKE 524 (875)
Q Consensus 454 ~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 524 (875)
+.+.|.|.+.+-... ++. .-=++.+-|+..+.+++|++.+.. |.++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL~--~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TLT--PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CCC--CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 677888888775433 110 123567889999999999999875 9999976 4788999
Q ss_pred HHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhC-----CCEEEEEcCCc-cCHH
Q 002832 525 TGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGV-NDAP 598 (875)
Q Consensus 525 ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~-----g~~Vam~GDG~-NDap 598 (875)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+.++|+||-. .|.-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 0 12234576666788888755 55699999974 4554
Q ss_pred H
Q 002832 599 A 599 (875)
Q Consensus 599 A 599 (875)
+
T Consensus 152 ~ 152 (168)
T PF09419_consen 152 M 152 (168)
T ss_pred H
Confidence 4
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.25 Score=50.83 Aligned_cols=97 Identities=13% Similarity=0.033 Sum_probs=55.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHH--HHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--AKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
-++.|++.+.+++|++.|+++.++|+..... ........++.... ..++...+.. ..+-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--d~v~~s~~~~-----------------~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--DAVVESCLEG-----------------LRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--CEEEEeeecC-----------------CCCC
Confidence 3678999999999999999999999865432 22222223332110 0111100000 0111
Q ss_pred CHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
.|+-=..+.+.+.-....+.|+||...|+.+=++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 22222233333333345688999999999999999874
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.45 E-value=0.82 Score=45.21 Aligned_cols=40 Identities=8% Similarity=0.029 Sum_probs=31.5
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCH------------HHHHHHHHHhCCC
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 532 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 532 (875)
+-|++.+++++|+++|+++.++|.-.. .....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 348999999999999999999997543 2345667777873
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=90.18 E-value=1.1 Score=55.86 Aligned_cols=67 Identities=9% Similarity=0.143 Sum_probs=45.2
Q ss_pred HHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHH-HhCCCcEEEEcCCCHHHHHHHHH
Q 002832 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIAKETGR 527 (875)
Q Consensus 449 ~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~aGI~v~miTGD~~~tA~~ia~ 527 (875)
...+.|.....|.+++-|.. |++-.....-.+-++..+++++| ++.|+.|.++||....+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 33445555566777666544 44322222235667899999997 78899999999999988776654
Q ss_pred H
Q 002832 528 R 528 (875)
Q Consensus 528 ~ 528 (875)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.21 E-value=0.93 Score=46.14 Aligned_cols=97 Identities=8% Similarity=-0.007 Sum_probs=56.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH-HHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+++++|++.|+++.++|.-+.......- +..++... -..++...+.. ...-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~~-----------------~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYLSQDLG-----------------MRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEEecccC-----------------CCCCCH
Confidence 46899999999999999999999987655443221 11233110 00111111100 001112
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGI 607 (875)
+-=..+.+.+.-....+.|+||...|..+-++|++-.
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2222333444334456899999999999999988853
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.16 E-value=2.8 Score=42.49 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=32.3
Q ss_pred ChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 496 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
.+.+.+.+|+++|++|+.+|.-...--...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5788999999999999999998887777777888875
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.86 E-value=7.5 Score=43.31 Aligned_cols=61 Identities=8% Similarity=0.007 Sum_probs=42.7
Q ss_pred HHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCC--CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH
Q 002832 452 DKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFD--PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526 (875)
Q Consensus 452 ~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D--~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia 526 (875)
..+++...+++++-|.. |++-++.-.| .+-++..++|++|. .|+++.++||.......+..
T Consensus 104 ~~~~~~k~~llflD~DG-------------TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 104 MEASRGKQIVMFLDYDG-------------TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HHHhcCCCeEEEEecCC-------------cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 33444445555555543 5554444333 36789999999999 78999999999998888773
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.22 E-value=1.1 Score=46.39 Aligned_cols=97 Identities=11% Similarity=0.141 Sum_probs=61.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|+++++++.| ++++.++|+.....+...=+..|+.... ...++.+.+.. ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 5678999999998 4899999999888777777777774321 01122221110 0011122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
-=....+.+.-..+.++|+||..+|..+=++|++-...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22333333333335589999999999999999987653
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.90 E-value=2.9 Score=42.45 Aligned_cols=116 Identities=18% Similarity=0.196 Sum_probs=67.1
Q ss_pred CCCCChHHHHHHHHhCCC-cEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccc-cccc--cCCcccHHHHhhhCcEEEE
Q 002832 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ-NKDE--SIVALPVDELIEKADGFAG 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~vfar 567 (875)
|+-|+..++|+.+++.|- .++++|--|.---..+-+..|+.+- -..+.+.. ..|. .+.-.+.. .-+-+.|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~--F~~IfTNPa~~da~G~L~v~pyH----~~hsC~~ 157 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL--FSEIFTNPACVDASGRLLVRPYH----TQHSCNL 157 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH--HHHHhcCCcccCCCCcEEeecCC----CCCccCc
Confidence 778999999999999996 9999998887665666666665210 00000000 0000 00000000 0012344
Q ss_pred eCH-HHHHHHHHHHhhCC-------CEEEEEcCCccC-HHHHhhCCceEEec-Ccc
Q 002832 568 VFP-EHKYEIVKRLQARK-------HICGMTGDGVND-APALKKADIGIAVA-DAT 613 (875)
Q Consensus 568 ~sP-~~K~~iV~~lq~~g-------~~Vam~GDG~ND-apALk~AdVGIamg-~gt 613 (875)
|-| -=|..++..++..+ +.+-++|||.|| ||.++...--+||- .|-
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgf 213 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGF 213 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCC
Confidence 433 23777766665432 278999999999 68887776666774 443
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=87.64 E-value=1.3 Score=48.72 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=38.8
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH---HHhCCC
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (875)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556677799999999999999999999999966666666 456763
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=86.48 E-value=1.4 Score=48.51 Aligned_cols=91 Identities=13% Similarity=0.069 Sum_probs=65.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH----hCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR----LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
++.+++.+++++|++.|+++.++|.-+...|..+-++ +|+.... .+.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999998887 6663210 0111
Q ss_pred eCHHHHHHHHH----HHhhCCCEEEEEcCCccCHHHHhhCCceEEec
Q 002832 568 VFPEHKYEIVK----RLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 568 ~sP~~K~~iV~----~lq~~g~~Vam~GDG~NDapALk~AdVGIamg 610 (875)
..+..|..-++ .+.-.-..++|+||...|..+.+++..++.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 22233444333 33323467999999999999999999886554
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.43 E-value=1.8 Score=43.43 Aligned_cols=93 Identities=15% Similarity=0.156 Sum_probs=59.6
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHH
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 572 (875)
+-| ..+.++.|++. ++..++||.....+...-++.|+.... ..++.+++.. ..+-.|+-
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~ 147 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDT 147 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHH
Confidence 345 46899999865 899999999999999988889885321 1222221110 11112332
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 573 K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
=....+.++-....+.|+||..+|+.+=++|++-
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 2333344443334578999999999999999864
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=83.38 E-value=3.5 Score=41.78 Aligned_cols=91 Identities=14% Similarity=0.126 Sum_probs=53.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCC--CCCcccccccccccCCcccHHHHhhhCcEEEEeC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM--YPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s 569 (875)
++.|++.+++++|++.+ +.+++|.-+..+....-+.+|+..-. .-..++ .++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~-----------------------~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVL-----------------------MCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEE-----------------------EeccC
Confidence 47899999999999875 66677764444433344555553100 000111 11111
Q ss_pred HHHHHHHH-HHHhhCC-CEEEEEcCCccCHHHHhhC--CceE
Q 002832 570 PEHKYEIV-KRLQARK-HICGMTGDGVNDAPALKKA--DIGI 607 (875)
Q Consensus 570 P~~K~~iV-~~lq~~g-~~Vam~GDG~NDapALk~A--dVGI 607 (875)
.. |-+++ +.+++.| +.++|+||..+|..|-++| ++-.
T Consensus 130 ~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 130 ES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 11 22333 2333334 4588999999999999999 8853
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=83.06 E-value=1.5 Score=43.93 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=60.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.+++.+++++|+ .++.++|+-+...+...-++.|+.... ..++.+.+.... ...+.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF--DGIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh--CeEEEeecccCc-------------cCCCCCCHH
Confidence 46789999999997 479999998888888888888884311 112211111000 000011222
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
-=..+.+.+......+.|+||...|..+=++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22344444544456788999999999998888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=82.12 E-value=0.8 Score=41.19 Aligned_cols=48 Identities=19% Similarity=0.272 Sum_probs=35.5
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH---HHhCCC
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (875)
|.+.-.+.+=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 556667888999999999999999999999988744433333 557775
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 875 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-121 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 7e-39 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 4e-38 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 5e-38 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 5e-37 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-24 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-24 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-24 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-24 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-21 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-21 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 7e-15 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 3e-07 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-07 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 3e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 3e-06 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-05 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-05 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 875 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-137 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-136 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-124 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-47 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 9e-46 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-32 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 6e-31 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-29 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 6e-28 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-15 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-18 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 3e-16 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 9e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 5e-06 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 1e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 2e-05 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 2e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 2e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 2e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 2e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 4e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-04 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 4e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 4e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 5e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 7e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1171 bits (3031), Expect = 0.0
Identities = 697/862 (80%), Positives = 772/862 (89%), Gaps = 4/862 (0%)
Query: 6 ETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKF 65
++E + E VDLE +P+EEVF+ L+C++EGL+T+ E+R+ IFG NKLEEK+ESK+LKF
Sbjct: 2 SSLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKF 61
Query: 66 LGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAA 125
LGFMWNPLSWVME AAIMAIALANG G+PPDWQDFVGI+ LL+INSTISFIEENNAGNAA
Sbjct: 62 LGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAA 121
Query: 126 AALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSAL 185
AALMA LAPK+KVLRDGKW E++AAILVPGDI+S+KLGDIIPADARLLEGDPLK+DQSAL
Sbjct: 122 AALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSAL 181
Query: 186 TGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLT 245
TGESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLT
Sbjct: 182 TGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 241
Query: 246 AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305
AIGNFCICSIA+GM++EIIVMYPIQ RKYR GIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 242 AIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 301
Query: 306 HRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLM 365
HRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+E+F KGV+ D V+L
Sbjct: 302 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLF 361
Query: 366 AARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRV 425
AA ASRVENQDAIDAA+VGMLADPKEARA I+EVHFLPFNP DKRTALTYID G HRV
Sbjct: 362 AAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRV 421
Query: 426 SKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIG 485
SKGAPEQIL L + +++ ++V +IIDK+AERGLRSLAVA Q VP+ KES G PW+F+G
Sbjct: 422 SKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVG 481
Query: 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQN 545
L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLG +
Sbjct: 482 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTH 541
Query: 546 KDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605
KD ++ ++PV+ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKKADI
Sbjct: 542 KDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADI 601
Query: 606 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 665
GIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM
Sbjct: 602 GIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 661
Query: 666 LLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 725
L+ALIW+FDF FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TGV+LGGY A
Sbjct: 662 LIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQA 721
Query: 726 MMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSW 785
+MTVIFFWAA++TDFF TFGV S+ D+ +L A+YLQVS ISQALIFVTR+RSW
Sbjct: 722 IMTVIFFWAAHKTDFFSDTFGVRSIR----DNNHELMGAVYLQVSIISQALIFVTRSRSW 777
Query: 786 SFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFI 845
SFV+RPG LL++AF +AQLIATLIAVYANW FA I G+GWGWAGV+WLY+++ Y PLD
Sbjct: 778 SFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVF 837
Query: 846 KFFIRYALSGKAWDLVIEQRVH 867
KF IRY LSGKAW + E +
Sbjct: 838 KFAIRYILSGKAWLNLFENKTA 859
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1058 bits (2737), Expect = 0.0
Identities = 299/868 (34%), Positives = 472/868 (54%), Gaps = 49/868 (5%)
Query: 9 EAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGF 68
E + V E++ +T + GL++E +R +G N+++E++E+ LKFLGF
Sbjct: 62 EEEEEATPGGGRVVPEDMLQT--DTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGF 119
Query: 69 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAAL 128
P+ +VME AA++A L DW DF I LLL+N+ + F++E AG+ L
Sbjct: 120 FVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDEL 172
Query: 129 MASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP-LKIDQSALTG 187
+LA K+ VLRDG E +A +VPGDI+ V+ G IIPAD R++ D L++DQSALTG
Sbjct: 173 KKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTG 232
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTA 246
ESL V K GD V++ S K+GE V+ ATG +TF G+AA LV++ GHF +VL
Sbjct: 233 ESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292
Query: 247 IGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306
IG + + +++ + + + ++ L + I G+P+ +P V++ TMA+G+
Sbjct: 293 IGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAA 351
Query: 307 RLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMA 366
L+ + AI ++++AIE +AG+++LCSDKTGTLT NKLS+ GVD + ++L A
Sbjct: 352 YLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTA 408
Query: 367 ARASRVENQ--DAIDAAIVGMLADPKEARANIQE---VHFLPFNPTDKRTALTYIDSEGK 421
A+ + + DAID A + L A++ + + + F PF+P K+ +G+
Sbjct: 409 CLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGE 468
Query: 422 MHRVSKGAPEQILNLVRNKS----EIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESS 477
KGAP +L V E+++ + +FA RG RSL VA +
Sbjct: 469 RITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------- 520
Query: 478 GGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 537
G W+ +G+MP DPPRHD+ +T+ A LG+++KM+TGD + IA+ET R+LG+GTN+Y
Sbjct: 521 EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYN 580
Query: 538 SSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDA 597
+ L + + V + +E ADGFA VFP+HKY +V+ LQ R ++ MTGDGVNDA
Sbjct: 581 AERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDA 639
Query: 598 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657
P+LKKAD GIAV ++DAARSA+DIV PGL II A+ TSR IF RM Y +Y ++++
Sbjct: 640 PSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS 699
Query: 658 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTG 717
I + + L I +V+ IAI D + I+ D S P W L +++
Sbjct: 700 IHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMS 759
Query: 718 VILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALI 777
V+LG LA+ T I Y ++ + ++LQ+S LI
Sbjct: 760 VLLGVVLAVGTWITVTTMYAQGENGGIV----------QNFGNMDEVLFLQISLTENWLI 809
Query: 778 FVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLI 837
F+TRA + P L A + ++AT ++ + + +W+++
Sbjct: 810 FITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHSDT---SIVAVVRIWIFSFG 866
Query: 838 FYIPLDFIKFFIRYALSGKAWDLVIEQR 865
+ + + + ++ ++ +D ++ +
Sbjct: 867 IFCIMGGVYYILQDSV---GFDNLMHGK 891
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 433 bits (1117), Expect = e-137
Identities = 201/998 (20%), Positives = 374/998 (37%), Gaps = 167/998 (16%)
Query: 2 DSKAETMEAVLKEA-VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEE-KQ 58
+ E +E + KE ++ + + E+ + + + +GLS A E L G N L +
Sbjct: 36 GKRKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRG 95
Query: 59 ESKILKFLGFMWNPLSWVMEAAAIMAIAL------ANGGGKPPDWQDFVGIVTLLLINST 112
+ +KF + L +M AA + + + + ++ ++++
Sbjct: 96 TPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155
Query: 113 ISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARL 172
+ +E + N A+ + ++ V+RDG + +A LV GD++ +K GD +PAD R+
Sbjct: 156 FGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRI 215
Query: 173 LEGDPLKIDQSALTGESLPVTK-------GPGDS---VYSGSTCKQGEIEAVVIATGVHT 222
L+ K+D S+LTGES P T+ P ++ + + C +G + +V+ TG T
Sbjct: 216 LQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRT 275
Query: 223 FFGKAAHLVDSTNQQ--------GHFQKVLTAIGNFCICSIAVGM-IVEIIVMYPIQHRK 273
G+ A L + HF ++ + IV + + Y
Sbjct: 276 IIGRIASLASGVENEKTPIAIEIEHFVDIIAGL----AILFGATFFIVAMCIGYTF---- 327
Query: 274 YRPGIDNLLV---LLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVL 330
+ ++ +++ +P + ++V +++ + RL+ + + K + A+E + V+
Sbjct: 328 ----LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVI 383
Query: 331 CSDKTGTLTLNKLSVDK---------------NLIEIFAKGVDADAVVLMAA----RASR 371
CSDKTGTLT N+++V + F + + + RA+
Sbjct: 384 CSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAF 443
Query: 372 VENQ------------DAIDAAIVGM----LADPKEARANIQEVHFLPFNPTDKR--TAL 413
Q DA + A++ L + R +V +PFN T+K +
Sbjct: 444 KSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIH 503
Query: 414 TYIDSEGKMHRV-SKGAPEQILN-----LVRNK-----SEIERRVHAIIDKFAERGLRSL 462
T D H + KGAPE++L L++ + + G R L
Sbjct: 504 TLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVL 563
Query: 463 AVAYQEVPDGRKESSGGPWQ-----------FIGLMPLFDPPRHDSAETIRRALNLGVNV 511
+ + F GL+ + DPPR + + + G+ V
Sbjct: 564 GFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRV 623
Query: 512 KMITGDQ----LAIAKETG-------RRLGMGTNMYPSSALLGQNKDESIV-------AL 553
M+TGD AIA G + + + + + V +
Sbjct: 624 IMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683
Query: 554 PVDELIEKADG-----FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
EL+E FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A
Sbjct: 684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVA 743
Query: 609 VADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--AVSIT-IRIVLGF 664
+ A +DAA++A+D++L + + I++ V R IF +K Y +I + L +
Sbjct: 744 MGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIY 803
Query: 665 MLLALIWKFDFP--PFMVLIIAILNDGT-------------IMTISKDRVKPSPLPDSWK 709
+ +++ P +L I + D IM + R +
Sbjct: 804 ITVSV----PLPLGCITILFIELCTDIFPSVSLAYEKAESDIMH-LRPRNPKRDRLVNEP 858
Query: 710 LAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQV 769
L + +G + ++ A + + V + + + L + Y Q
Sbjct: 859 L--AAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDS-YGQE 915
Query: 770 STISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WGW 827
T Q L + F+ + + Q+ LI S
Sbjct: 916 WTFGQRLYQQYTCYTVFFI---------SIEMCQIADVLIRKTRRLSAFQQGFFRNRILV 966
Query: 828 AGVVW---LYNLIFYIPLDFIKFFIRYALSGKAWDLVI 862
+V+ + + Y P F + + W + +
Sbjct: 967 IAIVFQVCIGCFLCYCPG-MPNIFNFMPIRFQWWLVPM 1003
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 430 bits (1109), Expect = e-136
Identities = 203/986 (20%), Positives = 366/986 (37%), Gaps = 163/986 (16%)
Query: 12 LKEAVDLE--NVPMEEVFETLRCNKE-GLSTEAAEERLTIFGYNKLEE-KQESKILKFLG 67
LK+ V ++ + ++E+ + GL+ A+E L G N L + +KF
Sbjct: 40 LKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCR 99
Query: 68 FMWNPLSWVMEAAAIMAIAL------ANGGGKPPDWQDFVGIVTLLLINSTISFIEENNA 121
++ S ++ AI+ + V + T++++ S+ +E +
Sbjct: 100 QLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKS 159
Query: 122 GNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKID 181
+ + ++ V+RDG+ +A +V GD++ VK GD IPAD R++ K+D
Sbjct: 160 SRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVD 219
Query: 182 QSALTGESLPVTK-------GPGDS---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
S+LTGES P T+ P ++ + + C +G VV+ TG T G+ A L
Sbjct: 220 NSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLA 279
Query: 232 DSTNQQ--------GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLV 283
HF ++T + ++ +G+ I+ + Y ++ ++
Sbjct: 280 SGLEVGRTPIAIEIEHFIHIITGV------AVFLGVSFFILSLI----LGY-SWLEAVIF 328
Query: 284 ---LLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
+++ +P + ++V + + + R++ + + K + A+E + +CSDKTGTLT
Sbjct: 329 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 388
Query: 341 NKLSV-----DKNLIEI----------FAKGVDADAVVLMAA----RASRVENQ------ 375
N+++V D + E F K + + A RA Q
Sbjct: 389 NRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPIL 448
Query: 376 ------DAIDAAIVGM----LADPKEARANIQEVHFLPFNPTDKR--TALTYIDSEGKMH 423
DA ++A++ + R ++ +PFN T+K + S +
Sbjct: 449 KRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRY 508
Query: 424 RV-SKGAPEQILNL---------VRNKSEIER-RVHAIIDKFAERGLRSLAVAYQEVPDG 472
+ KGAPE+IL+ E + + G R L + +P+
Sbjct: 509 LLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPED 568
Query: 473 RKESSGGPWQ-----------FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ--- 518
+ F+GLM + DPPR + + + + G+ V M+TGD
Sbjct: 569 KYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 628
Query: 519 -LAIAKETG-------RRLGMGTNMYPSSALLGQNKDESIV-------ALPVDELIEKAD 563
AIAK G + + + ++ V L + L +
Sbjct: 629 AKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILH 688
Query: 564 G-----FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA-TDAAR 617
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ + +D ++
Sbjct: 689 YHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSK 748
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--AVSIT-IRIVLGFMLLALIWKFD 674
A+D++L + + I++ V R IF +K Y +I I L F++
Sbjct: 749 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN--VPLP 806
Query: 675 FPPFMVLIIAILNDGT-------------IMTISKDRVKPSPLPDSWKLAEIFTTGVILG 721
+L I + D IM K L + ++ + ++
Sbjct: 807 LGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQ 866
Query: 722 GYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTR 781
+ +F + F P + + D W + Q T Q I
Sbjct: 867 ALGGFFS--YFVILAENGFLPM--DLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFT 922
Query: 782 ARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WGWAGVVW---LYNL 836
+ F+ + V Q +I S G+ G+ L
Sbjct: 923 CHTSFFI---------SIVVVQWADLIICKTRRNSIFQQ-GMKNKILIFGLFEETALAAF 972
Query: 837 IFYIPLDFIKFFIRYALSGKAWDLVI 862
+ Y P Y L W
Sbjct: 973 LSYCPG-TDVALRMYPLKPSWWFCAF 997
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 398 bits (1026), Expect = e-124
Identities = 235/999 (23%), Positives = 383/999 (38%), Gaps = 193/999 (19%)
Query: 22 PMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWVMEA 79
EE + GL+ + + L +G+N+L E+ +S + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 80 AAIMAIALA---NGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKS 136
AA ++ LA G + + I+ +L+ N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 137 KVLRDGKWMEE--DAAILVPGDIISVKLGDIIPADARLL--EGDPLKIDQSALTGESLPV 192
KV R + + A +VPGDI+ V +GD +PAD R+L + L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 193 TKGP----------GDS---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQ-- 237
K D ++SG+ G+ +V TGV T GK + +T Q
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 238 ------GHFQKVLT-AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLV---LLIG 287
F + L+ I C+ + + ++ R I + L +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH--GGSWIRGAIYYFKIAVALAVA 306
Query: 288 GIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 347
IP +P V++ +A+G+ R++ + AI + + ++E + V+CSDKTGTLT N++SV K
Sbjct: 307 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 366
Query: 348 --------------NLIEIFAKGVDADAVVLMAARASRVENQDAIDA-AIVGMLA----- 387
N I + VL + R D + A + L
Sbjct: 367 MFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSL 426
Query: 388 -------------DPKEA-------RANIQEVHFLPFNPTDKRTALTYI----------- 416
+ E + N+ + ++ A +
Sbjct: 427 DFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL 486
Query: 417 --DSEGKM----HRVSK-------------GAPEQILNL---VRNKSEIE-------RRV 447
+ K +K GAPE +++ VR + ++
Sbjct: 487 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKI 546
Query: 448 HAIIDKF--AERGLRSLAVAYQEVPDGRKESSGGPWQ----------FIGLMPLFDPPRH 495
++I ++ LR LA+A ++ P R+E F+G++ + DPPR
Sbjct: 547 LSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRK 606
Query: 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS--ALLGQNKDESIVAL 553
+ +I+ + G+ V MITGD A RR+G+ + A G+ D L
Sbjct: 607 EVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD----DL 662
Query: 554 PVDELIEKADG---FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
P+ E E FA V P HK +IV+ LQ+ I MTGDGVNDAPALKKA+IGIA+
Sbjct: 663 PLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG 722
Query: 611 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVL 662
T A++AS++VL + S I++AV RAI+ MK + Y V I + L
Sbjct: 723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAAL 782
Query: 663 GFMLLALIWKFDFPPFMVLIIAILNDGT-------------IMTISKDRVKPSPLPDSWK 709
G + ALI P +L + ++ DG IM R PL W
Sbjct: 783 G-LPEALI------PVQLLWVNLVTDGLPATALGFNPPDLDIMD-RPPRSPKEPLISGWL 834
Query: 710 LAEIFTTGVILGGYLAMMTV-IFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQ 768
+ +GGY+ TV W + P H + + +
Sbjct: 835 FFRY----MAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCE 890
Query: 769 VSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WG 826
+ + + ++ L ++ N S + W
Sbjct: 891 IFEA-------PEPMTMALS---------VLVTIEMCNALNSLSENQSLMRMPPWVNIWL 934
Query: 827 WAGVVW---LYNLIFYIPLDFIKFFIRYALSGKAWDLVI 862
+ L+ LI Y+ F AL W +V+
Sbjct: 935 LGSICLSMSLHFLILYVDP-LPMIFKLKALDLTQWLMVL 972
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 6e-47
Identities = 135/535 (25%), Positives = 214/535 (40%), Gaps = 91/535 (17%)
Query: 120 NAGNAAAALMASLAPKS-KVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPL 178
G A L+ L K+ V+RDGK + + GDI+ V+ G+ IP D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 179 KIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQG 238
+D+S ++GE +PV K GD V+ + G ++ G T + LV+ + G
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVE--DAMG 312
Query: 239 H---FQKVLTAI-GNF--CICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIA 292
Q++ + F + +A I I Y I H L+ +L+ P A
Sbjct: 313 SKPPIQRLADKVVAYFIPTVLLVA---ISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCA 369
Query: 293 M----PTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKN 348
PT L+V G + + G + K A+E + + DKTGTLT K V
Sbjct: 370 FGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV--- 422
Query: 349 LIEIFAKGVDADAVVLMAARASRVENQDA--IDAAIVGMLADPKEARANIQEVHFLPFNP 406
++ D ++ +AA E + I AIV K+A H +
Sbjct: 423 -TDLVPLNGDERELLRLAAI---AERRSEHPIAEAIV------KKALE-----HGIELGE 467
Query: 407 TDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAY 466
+K + + G + + V ++K ++ VA
Sbjct: 468 PEKVEVIAGEGVVAD--GILVGNKRL---MEDFGVAVSNEVELALEKLEREAKTAVIVAR 522
Query: 467 QEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526
+GR G++ + D + + ++ +G+ V MITGD A+
Sbjct: 523 ----NGR---------VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 569
Query: 527 RRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHI 586
R L +D +I A V P K E VK+LQA K +
Sbjct: 570 RELN------------------------LDLVI------AEVLPHQKSEEVKKLQA-KEV 598
Query: 587 CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 641
GDG+NDAPAL +AD+GIAV +D A + DIVL L +++A+ SR
Sbjct: 599 VAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 9e-46
Identities = 137/566 (24%), Positives = 224/566 (39%), Gaps = 107/566 (18%)
Query: 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPKS-KVLRDGKWMEEDAAILVPGDIISVK 161
++ LL+ T+ ++ G A L+ L K+ V+RDGK + + GDI+ V+
Sbjct: 102 LLAFLLLGRTLEARAKSRTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVR 160
Query: 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVH 221
G+ IP D ++EG+ +D+S ++GE +PV K GD V+ + G ++ G
Sbjct: 161 PGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGE 219
Query: 222 TFF------------GKA--AHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMY 267
T K L D +F + T + +A I I Y
Sbjct: 220 TLLAQIVKLVEDAMGSKPPIQRLADKVV--AYF--IPTVLL------VA---ISAFIYWY 266
Query: 268 PIQHRKYRPGIDNLLVLLIGGIPIAM----PTVLSVTMAIGSHRLSLQGAITKRMTAIEE 323
I H L+ +L+ P A PT ++T+ +G + + G + K A+E
Sbjct: 267 FIAHAPLLFAFTTLIAVLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEV 322
Query: 324 MAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDA--IDAA 381
+ + DKTGTLT K V ++ D ++ +AA E + I A
Sbjct: 323 AEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI---AERRSEHPIAEA 375
Query: 382 IVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS 441
IV K+A H + +K + + G +
Sbjct: 376 IV------KKALE-----HGIELGEPEKVEVIAGEGVVAD--GILVGNKRL---MEDFGV 419
Query: 442 EIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETI 501
+ V ++K ++ VA +G + G++ + D + + +
Sbjct: 420 AVSNEVELALEKLEREAKTAVIVAR----NG---------RVEGIIAVSDTLKESAKPAV 466
Query: 502 RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561
+ +G+ V MITGD A+ R L +D +I
Sbjct: 467 QELKRMGIKVGMITGDNWRSAEAISRELN------------------------LDLVI-- 500
Query: 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621
A V P K E VK+LQA K + GDG+NDAPAL +AD+GIAV +D A + D
Sbjct: 501 ----AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGD 555
Query: 622 IVLTEPGLSVIISAVLTSRAIFQRMK 647
IVL L +++A+ SR ++K
Sbjct: 556 IVLIRDDLRDVVAAIQLSRKTMSKIK 581
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-32
Identities = 83/336 (24%), Positives = 128/336 (38%), Gaps = 73/336 (21%)
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQ 375
+ A E + + DKTGTLT + V +I D ++ +AA +E +
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAAS---LEAR 54
Query: 376 DA--IDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKM--HRVSKGAPE 431
I AAIV +EA ++ A+ EG + R +P
Sbjct: 55 SEHPIAAAIV------EEAEK-----RGFGLTEVEEFRAIPGKGVEGIVNGRRYMVVSPG 103
Query: 432 QILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFD 491
I E+ + ++K ++G + + +G G++ L D
Sbjct: 104 YI-------RELGIKTDESVEKLKQQGKTVVFILK----NGE---------VSGVIALAD 143
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIV 551
R +S E I + +G+ M+TGD +AK LG
Sbjct: 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG--------------------- 182
Query: 552 ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611
+D+ A V P K E VK +Q + M GDGVNDAPAL +AD+GIA+
Sbjct: 183 ---LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIAIGA 232
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
TD A +DIVL + + V SR + +
Sbjct: 233 GTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 6e-31
Identities = 81/330 (24%), Positives = 127/330 (38%), Gaps = 69/330 (20%)
Query: 320 AIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDA-- 377
A+E + + DKTGTLT K V ++ D ++ +AA E +
Sbjct: 25 ALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI---AERRSEHP 77
Query: 378 IDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLV 437
I AIV K+A H + +K + + G +
Sbjct: 78 IAEAIV------KKALE-----HGIELGEPEKVEVIAGEGVVAD--GILVGNKRL---ME 121
Query: 438 RNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDS 497
+ V ++K ++ VA +GR G++ + D + +
Sbjct: 122 DFGVAVSNEVELALEKLEREAKTAVIVAR----NGR---------VEGIIAVSDTLKESA 168
Query: 498 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDE 557
++ +G+ V MITGD A+ R L +D
Sbjct: 169 KPAVQELKRMGIKVGMITGDNWRSAEAISRELN------------------------LDL 204
Query: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
+I A V P K E VK+LQA K + GDG+NDAPAL +AD+GIAV +D A
Sbjct: 205 VI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAV 257
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+ DIVL L +++A+ SR ++K
Sbjct: 258 ESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 117 bits (297), Expect = 1e-29
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 30/166 (18%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 541
+ I + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 542 LGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
+ E + + PE K I+++L+ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 6e-28
Identities = 83/333 (24%), Positives = 127/333 (38%), Gaps = 72/333 (21%)
Query: 320 AIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQD--A 377
A+E M ++ L DKTGTLT + I D + +AA +E+Q
Sbjct: 413 ALERMEKVNTLVVDKTGTLTEGHPKL----TRIVTDDFVEDNALALAAA---LEHQSEHP 465
Query: 378 IDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKM--HRVSKGAPEQILN 435
+ AIV A+ L + A T G++ H V+ G +
Sbjct: 466 LANAIV------HAAKE-----KGLSLGSVEAFEAPTGKGVVGQVDGHHVAIGNARLMQE 514
Query: 436 LVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495
+ + + D+ +G + +A DG + + L+ + DP +
Sbjct: 515 HGGDNAPLF----EKADELRGKGASVMFMAV----DG---------KTVALLVVEDPIKS 557
Query: 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPV 555
+ ETI G+ + M+TGD A+ LG +
Sbjct: 558 STPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG------------------------I 593
Query: 556 DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDA 615
+++ A + PE K IV L+ + I M GDGVNDAPAL KADIGIA+ TD
Sbjct: 594 KKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV 647
Query: 616 ARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648
A ++ + L L I A S + M N
Sbjct: 648 AIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 4e-15
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 122 GNAAAALMASLAPK--SKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLK 179
G+A AL+ L P+ ++ DG E + GD++ V+ G+ IP D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 180 IDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGV 220
+D+S +TGE +PV K V + + G V+ A V
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSF--VMKALHV 309
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 80.6 bits (200), Expect = 2e-18
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 124 AAAALMASLAPKS-KVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182
A L+ L K+ V+RDGK + + GDI+ V+ G+ IP D ++EG+ +D+
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 183 SALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGV 220
S ++GE +PV K GD V+ + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 74.8 bits (185), Expect = 3e-16
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 120 NAGNAAAALMASLAPKS-KVLRDGKWMEEDAAILVP------GDIISVKLGDIIPADARL 172
A A L+ SL ++ + V GDII V G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 173 LEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGV 220
+EG +D+S +TGE++PV K PG +V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 9e-15
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 17/159 (10%)
Query: 354 AKGVDADAVVLMAARASRVENQ--DAIDAAIV--GMLADPKEARANIQEVHFLPFNPTDK 409
G ++ V+ A S + + +D A++ + + Q++ +PF+ +
Sbjct: 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR 69
Query: 410 RTALTYIDSEGKMHRVSKGAPEQILNL---VRNKSEIE-------RRVHAIIDKFAERGL 459
R ++ ++ V KGA ++ILN+ VR+ EI R++ + D +GL
Sbjct: 70 RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 460 RSLAVAYQEVPDGRKESSGGPWQ---FIGLMPLFDPPRH 495
R +AVA + +P + G + D H
Sbjct: 130 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.7 bits (154), Expect = 2e-10
Identities = 79/561 (14%), Positives = 162/561 (28%), Gaps = 165/561 (29%)
Query: 1 MDSKAETME-------AVLKEAV----DLENVP--MEEVFETLRCNKEGLSTEAAEERL- 46
MD + + +V ++A D ++V + + + ++ A
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-DHIIMSKDAVSGTL 65
Query: 47 TIFGYNKLEEKQESKILKFLGFMWNP-LSWVMEAAAIMAIALANGGGKPPDWQDFVGIVT 105
+F L KQE + KF+ + ++M + +P
Sbjct: 66 RLFW--TLLSKQEEMVQKFVEEVLRINYKFLMSP-------IKTEQRQPSM--------- 107
Query: 106 LLLINSTISFIEE-NNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGD 164
T +IE+ + N K V R +++ + L +
Sbjct: 108 -----MTRMYIEQRDRLYNDNQVF-----AKYNVSRLQPYLK-----------LRQALLE 146
Query: 165 IIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVH--T 222
+ PA L++G G G + + C +++ + +
Sbjct: 147 LRPAKNVLIDGV-----------------LGSGKTWVALDVCLSYKVQCK-MDFKIFWLN 188
Query: 223 FFGKAAHLVDSTNQQGHFQKVLTAI-GNFCI-CSIAVGMIVEIIVMYP-----IQHRKYR 275
QK+L I N+ + + + I + ++ + Y
Sbjct: 189 L-KNCNSPETVLEML---QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244
Query: 276 PGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335
+ LLVLL + + + L +T R + D L + T
Sbjct: 245 ---NCLLVLL----NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATT 286
Query: 336 GTLTLNKLSV---DKNLIEIFAK--GVDAD------------AVVLMAAR----ASRVEN 374
++L+ S+ + + K + ++A + +N
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 375 -----QDAIDAAIVGMLA--DPKEARANIQEVHFLPFN---PTDKRTALTYIDSEGKMHR 424
D + I L +P E R + P + PT +L + D
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT-ILLSLIWFDVI----- 400
Query: 425 VSKGAPEQILNLVRNKSEIERR-------VHAIIDKFA-----ERGL-RSLAVAYQEVPD 471
K ++N + S +E++ + +I + E L RS+ Y +P
Sbjct: 401 --KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN-IPK 457
Query: 472 GRKESSGGP-------WQFIG 485
P + IG
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIG 478
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 1e-07
Identities = 67/483 (13%), Positives = 139/483 (28%), Gaps = 121/483 (25%)
Query: 441 SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKE--SS-------GGPWQFIGLMPLFD 491
E + + I+ F + + + ++V D K S G + LF
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDC--KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 492 PPRHDSAETIRRALN--LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDES 549
E +++ + L +N K + I E R+ M T MY N ++
Sbjct: 70 TLLSKQEEMVQKFVEEVLRINYKFLMS---PIKTEQ-RQPSMMTRMYIEQRDRLYNDNQV 125
Query: 550 IVALPVDELIEKADGFAGVFPEHKYEIVKRL-QARKH----ICGMTGDG--------VND 596
V + ++ + L + R I G+ G G
Sbjct: 126 FAKYNVSR------------LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 597 APALKKADIGI---AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653
K D I + + S ++ L I TSR+ N +
Sbjct: 174 YKVQCKMDFKIFWLNLKN----CNSPETVLEMLQKLLYQIDPNWTSRS--DHSSNIKLRI 227
Query: 654 VSITIRIVLGFM-------LLAL-------IWK-FDFPPFMVLIIAILNDG--TIMTISK 696
SI + LL L W F+ ++T ++
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL-------------SCKILLT-TR 273
Query: 697 DRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDID 756
+ + D L+ TT + L + +T +
Sbjct: 274 FK----QVTDF--LSAATTTHISLDHHSMTLT-----PDEVKSLLLKYLDCR------PQ 316
Query: 757 DWKKLASAIY-LQVSTISQALI-FVTRARSWSFVDRPGLLLVLAFAVAQLIATLI-AVYA 813
D + ++S I++++ + +W V+ L ++ ++ L ++
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF- 375
Query: 814 NWSFAAI--------EGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQR 865
++ + ++W +++I + + +Y+L K E
Sbjct: 376 -DRL-SVFPPSAHIPTIL----LSLIW-FDVIKSDVMVVVNKLHKYSLVEKQPK---EST 425
Query: 866 VHI 868
+ I
Sbjct: 426 ISI 428
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 5e-06
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
K V + + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 627 PG 628
G
Sbjct: 142 SG 143
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
I A N G+ V ++TG++ I + +L + ++ Q + + A +EL
Sbjct: 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLKV-DYLF-------QGVVDKLSAA--EELCN 89
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
+ G+ E GD +NDA LK+ I A A R S
Sbjct: 90 E----LGINLEQ--------------VAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLS 131
Query: 621 DIVLTEPG 628
I L + G
Sbjct: 132 TIFLEKRG 139
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
I+ + GV +I+G + AI + + LG+ +++ Q +++ +V L D+L+
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGI-EHLF-------QGREDKLVVL--DKLLA 104
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
+ + E GD + D P +++ +G+AVA+A R +
Sbjct: 105 E----LQLGYEQ--------------VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHA 146
Query: 621 DIVLTEPG 628
+ G
Sbjct: 147 HGITRAQG 154
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
IR AL + V +ITG + + ++ LG+ T++Y Q + ++A +L+E
Sbjct: 62 IRCALTSDIEVAIITGRKAKLVEDRCATLGI-THLY-------QGQSNKLIAF--SDLLE 111
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
K + PE+ GD + D P ++K + +AVADA +
Sbjct: 112 K----LAIAPEN--------------VAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRA 153
Query: 621 DIVLTEPG 628
D V G
Sbjct: 154 DYVTRIAG 161
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ K +K+ + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 627 PG 628
PG
Sbjct: 145 PG 146
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
I+ ++ + V +++G I + LG+ + K E A +L++
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGI-KLFF-------LGKLEKETAC--FDLMK 93
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
+ AGV E GD D PA AVADA ++A
Sbjct: 94 Q----AGVTAEQ--------------TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 135
Query: 621 DIVLTEPG 628
D VL+ G
Sbjct: 136 DHVLSTHG 143
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
I+ +G+ + +I+G A + LG+ +Y + + +++ E
Sbjct: 45 IKLLQKMGITLAVISGRDSAPLITRLKELGV-EEIY-------TGSYKKLEIY--EKIKE 94
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
K + E G GD V D +KK +AV +A + R +
Sbjct: 95 K----YSLKDEE--------------IGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVA 136
Query: 621 DIVLTEPG 628
+ G
Sbjct: 137 VYITQRNG 144
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
++ +N G+ + +ITG + I + + LG+ + +Y Q +D+ + A ++ +
Sbjct: 61 VKALMNAGIEIAIITGRRSQIVENRMKALGI-SLIY-------QGQDDKVQAY--YDICQ 110
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
K + PE G GD + D P ++K + + VAD +
Sbjct: 111 K----LAIAPEQ--------------TGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRA 152
Query: 621 DIVLTEPG 628
+ V G
Sbjct: 153 NYVTHIKG 160
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
IR + ++V +ITG + + ++ LG+ T++Y Q + + +VA EL+
Sbjct: 85 IRCLITSDIDVAIITGRRAKLLEDRANTLGI-THLY-------QGQSDKLVAY--HELLA 134
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
PE GD + D P + + + +AVADA +
Sbjct: 135 T----LQCQPEQ--------------VAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKA 176
Query: 621 DIVLTEPG 628
V G
Sbjct: 177 HYVTRIKG 184
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
++ + G+ V +IT Q A+ +LG+ T+ Y + + + A L +
Sbjct: 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGI-THYY-------KGQVDKRSAY--QHLKK 104
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
G+ + GD + D P +++ +G+AV++A +
Sbjct: 105 T----LGLNDDE--------------FAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFA 146
Query: 621 DIVLTEPG 628
D G
Sbjct: 147 DWRTERTG 154
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 17/110 (15%), Positives = 29/110 (26%), Gaps = 6/110 (5%)
Query: 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDEL 558
E + + +I+G + +Y + A +
Sbjct: 84 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 143
Query: 559 IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
G K ++ L M GD V D A K +D+ A
Sbjct: 144 CSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* Length = 156 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 4e-04
Identities = 28/138 (20%), Positives = 51/138 (36%), Gaps = 19/138 (13%)
Query: 335 TGTLTL-NKLSVDKNLIEIF--AKGVDADAVVLMAARASRVENQDAIDAAIV---GMLAD 388
+G N+ + + F A+GVD + A AS + +IV +
Sbjct: 14 SGHGGRHNRQASE------FIPAQGVDEKTLADAAQLASLADETP-EGRSIVILAKQRFN 66
Query: 389 PKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIERRV 447
+E F+PF ++ ++ I+ + + KG+ + I V N V
Sbjct: 67 LRERDVQSLHATFVPFTA---QSRMSGINIDN--RMIRKGSVDAIRRHVEANGGHFPTDV 121
Query: 448 HAIIDKFAERGLRSLAVA 465
+D+ A +G L V
Sbjct: 122 DQKVDQVARQGATPLVVV 139
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 624 LTEPGLSVII 633
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ K EI++++ + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 624 LTEPGLSVII 633
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
V + K +I+ L + + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 624 LTEPGLSVII 633
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 7e-04
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ +K + + L AR +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 624 LTEPGLSVII 633
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 875 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 100.0 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.95 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.94 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.94 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.89 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.79 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.43 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.31 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.19 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.18 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.13 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.09 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.09 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.09 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.06 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.94 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.9 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.87 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.84 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.8 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.76 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.72 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.69 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.65 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.62 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.61 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.61 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.57 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.5 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.49 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.49 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.48 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.47 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.47 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.46 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.45 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.4 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.38 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.33 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.3 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.26 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.25 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.25 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.19 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.19 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.18 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.17 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.12 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.08 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.08 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.07 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.07 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.06 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.05 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.03 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.03 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.01 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.01 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.98 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.97 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.96 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.96 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.96 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.94 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.94 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.94 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.93 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.93 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.91 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.89 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.88 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.86 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.82 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.8 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.79 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.76 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.7 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.7 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.7 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.67 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.65 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.65 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.65 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.64 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.64 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.64 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.64 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.63 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.63 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.6 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.59 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.58 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.57 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.56 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.52 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.49 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.48 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.47 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.45 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.45 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.38 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.31 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.27 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.1 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.0 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.98 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.94 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.9 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.81 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.81 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.58 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.54 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.53 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.49 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.47 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.35 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.26 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.18 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.13 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.1 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.02 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.96 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.82 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 95.7 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.69 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.57 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.74 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.69 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.43 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 94.43 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.95 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.77 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 93.25 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 93.15 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 92.49 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 92.28 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.73 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 89.67 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 87.47 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 86.66 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 86.58 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 81.57 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 80.8 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-145 Score=1330.15 Aligned_cols=857 Identities=81% Similarity=1.268 Sum_probs=728.4
Q ss_pred HHHhhhhccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002832 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIAL 87 (875)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 87 (875)
.++.+++..++|.++.+|++++|+++.+|||++|+++|+++||+|++++++++.|+.|+++|++|+.++|++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l 83 (885)
T 3b8c_A 4 LEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIAL 83 (885)
T ss_dssp --------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGS
T ss_pred hhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777788899999999999999999899999999999999999999988888888999999999999999999999987
Q ss_pred HhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccc
Q 002832 88 ANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIP 167 (875)
Q Consensus 88 ~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vP 167 (875)
+...+.+.+|.++++|+++++++..++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+||
T Consensus 84 ~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IP 163 (885)
T 3b8c_A 84 ANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIP 163 (885)
T ss_dssp SCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCS
T ss_pred HhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEe
Confidence 64444455899999888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhcccCCCCcHHHHHHHH
Q 002832 168 ADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247 (875)
Q Consensus 168 aD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i 247 (875)
|||+|++|++++||||+|||||.|+.|++||.+|+||.+.+|.++++|++||++|++|||++++++..+++|+|+.++++
T Consensus 164 aDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i 243 (885)
T 3b8c_A 164 ADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 243 (885)
T ss_dssp SCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHH
T ss_pred eceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHH
Confidence 99999999988999999999999999999999999999999999999999999999999999988777789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCc
Q 002832 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGM 327 (875)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v 327 (875)
+++++..+++++++.+++.+.....+|.+++..++++++++|||+||++++++++.|+.||+|+|+++|+++++|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v 323 (885)
T 3b8c_A 244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 323 (885)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCC
Confidence 88754433333333223333344457788899999999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCC
Q 002832 328 DVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPT 407 (875)
Q Consensus 328 ~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~ 407 (875)
|+||||||||||+|+|+|.+..+..+..+.++++++.+++.++...++||++.|++++..++.+.+..++.++.+||+|.
T Consensus 324 ~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~ 403 (885)
T 3b8c_A 324 DVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPV 403 (885)
T ss_dssp CCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTT
T ss_pred CEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcc
Confidence 99999999999999999986443334446677888888888877667899999999987765445567888899999999
Q ss_pred CceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEe
Q 002832 408 DKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487 (875)
Q Consensus 408 ~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i 487 (875)
+|||++++++.+|+.+.++|||||.++++|..+++.++.+.+.+++++++|+||+++|++++++.+.+..|++++|+|++
T Consensus 404 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli 483 (885)
T 3b8c_A 404 DKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLL 483 (885)
T ss_dssp TCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEE
T ss_pred cceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEE
Confidence 99999888766788788999999999999986555566788889999999999999999988776667778899999999
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
+++||||||++++|++||++||+|+|+||||+.||.++|+++||..+..+...+.|.+.++.+++.++++.+++++||||
T Consensus 484 ~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~ar 563 (885)
T 3b8c_A 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAG 563 (885)
T ss_dssp EECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEEC
T ss_pred EeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEE
Confidence 99999999999999999999999999999999999999999999765445567888888777888899999999999999
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHH
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~ 647 (875)
++|+||.++|+.||++|++|+|+|||+||+||||+||||||||+|+|+||++||+|+++|||++|++++++||++|+||+
T Consensus 564 v~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~ 643 (885)
T 3b8c_A 564 VFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK 643 (885)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHhhccccccccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 002832 648 NYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727 (875)
Q Consensus 648 ~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 727 (875)
||+.|++++|+..++.+++..++++++++|+|++|+|+++|+.++++++|+++|+++|.+|..++++..+++.|+++++.
T Consensus 644 ~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~ 723 (885)
T 3b8c_A 644 NYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAIM 723 (885)
T ss_dssp HHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999866655555567788999999999999999999999999999999999999888888888999999998
Q ss_pred HHHHHHHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHHHHHHHhcCCCccccCchHHHHHHHHHHHHHHH
Q 002832 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIAT 807 (875)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~ 807 (875)
++++|++....++++..++.+...+... ..++++|+.+++++|+++|++|+++++|+++|++++++++++..++.+
T Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (885)
T 3b8c_A 724 TVIFFWAAHKTDFFSDTFGVRSIRDNNH----ELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIAT 799 (885)
T ss_dssp HTTSSSCTTTTTTTTCCCCSSCCGGGTH----HHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTT
T ss_pred HHHHHHHHHHcCccccccCcccccchHH----HHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHH
Confidence 8877765543333322223211111111 345677887778888888999999988888887766665554444444
Q ss_pred HHHHhhcccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHhhhhcc
Q 002832 808 LIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRVHI 868 (875)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~~~ 868 (875)
++++|.++.++.+.|++|.||+++++++++++++.|+.|++.|+.+...+|...+.+|.+.
T Consensus 800 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~ 860 (885)
T 3b8c_A 800 LIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAF 860 (885)
T ss_dssp SSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC----------------
T ss_pred HHHHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHhhhhcccccc
Confidence 4455654555568899999999999999999999999999999988888888877776654
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-132 Score=1213.20 Aligned_cols=790 Identities=37% Similarity=0.611 Sum_probs=669.8
Q ss_pred HHHcCCC-CCCCCHHHHHHHHHhcCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHH
Q 002832 27 FETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVT 105 (875)
Q Consensus 27 ~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~ii~ 105 (875)
.+.|+++ .+|||++|+++|+++||+|++++++++.|..|+++|++|+++++++++++++++ ++|.++++|++
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~-------g~~~~~~~i~~ 149 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICG 149 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTC-------SCSSHHHHHHH
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhHHHHHHHHH
Confidence 4457876 579999999999999999999988888999999999999999999999999886 38889988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCC-eeeeccc
Q 002832 106 LLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP-LKIDQSA 184 (875)
Q Consensus 106 ~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~-l~VdeS~ 184 (875)
+++++..++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|++ +.||||+
T Consensus 150 vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~ 229 (920)
T 1mhs_A 150 LLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSA 229 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999996 8999999
Q ss_pred cCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 185 LTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEI 263 (875)
Q Consensus 185 LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 263 (875)
|||||.|+.|.+||.+|+||.+.+|.++++|++||++|++|||+++++++ .+++|+++.+++++++++.++++.+++.+
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887 56899999999998876544333332222
Q ss_pred HHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCccccCcc
Q 002832 264 IVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 343 (875)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m 343 (875)
+ .+...+.++.+++..++++++++|||+||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|
T Consensus 310 ~-~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 310 V-SSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp H-TTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred H-HHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 2 222334567788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeEEeccCCCChHHHHHHHHHhcccccc--ChHHHHHHHhcCC---hHHHhhcccEEEEecCCCCCceEEEEEEcC
Q 002832 344 SVDKNLIEIFAKGVDADAVVLMAARASRVENQ--DAIDAAIVGMLAD---PKEARANIQEVHFLPFNPTDKRTALTYIDS 418 (875)
Q Consensus 344 ~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~ai~~~~~~---~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~ 418 (875)
+|.+++. ..+.++++++..++.++...+. ||++.|++.+..+ .......++.++++||+|.+|+|+++++..
T Consensus 389 ~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~ 465 (920)
T 1mhs_A 389 SLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESP 465 (920)
T ss_dssp CCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCS
T ss_pred eEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeC
Confidence 9988642 2245555666666666554444 9999999886421 112345688999999999999999998777
Q ss_pred CCeEEEEEcCcHHHHHHhccC----ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCC
Q 002832 419 EGKMHRVSKGAPEQILNLVRN----KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPR 494 (875)
Q Consensus 419 ~g~~~~~~KGa~e~i~~~~~~----~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 494 (875)
+|+.+.++|||||.++++|.. +++.++.+.+.+++++++|+||+++|++. .|++++|+|+++++||||
T Consensus 466 ~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R 537 (920)
T 1mhs_A 466 QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPR 537 (920)
T ss_dssp SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCC
T ss_pred CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEecccc
Confidence 788888999999999999975 34556778889999999999999999984 267899999999999999
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCcccccccccccCCcccHHHHhhhCcEEEEeCHHH
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 572 (875)
||++++|++||++||+|+|+||||+.||.++|+++||..+.. ....++|. ..++++++.+.+++++||||++|+|
T Consensus 538 ~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred ccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 999999999999999999999999999999999999964321 12244554 3467788888999999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002832 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (875)
Q Consensus 573 K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 652 (875)
|.++|+.||++|++|+|+|||+||+||||+||||||||+|+|+||++||+|+++|+|++|++++++||++|+||+|++.|
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~ 694 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHhhccccccccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002832 653 AVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFF 732 (875)
Q Consensus 653 ~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 732 (875)
.++.|+.....+......++++++|++++|+++++|++++++++|+.++.++|.+|..++++..+++.|+++++.+++.|
T Consensus 695 ~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~ 774 (920)
T 1mhs_A 695 RIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITV 774 (920)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999986443333344567789999999999999998899999998777777777777677777788999888887776
Q ss_pred HHHHhcCcCCcccccccCCccchhhHHhHHHHHHHHHHHHHHH-HHHHHhcCCCccccCchHHHHHHHHHHHHHHHHHHH
Q 002832 733 WAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAV 811 (875)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 811 (875)
++.+..+ ...+ ..... ...++++|..++++|+ ++|++|+.+.+|.+.++++++.++++.+++.+++++
T Consensus 775 ~~~~~~~---~~~~---~~~~~-----~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (920)
T 1mhs_A 775 TTMYAQG---ENGG---IVQNF-----GNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTI 843 (920)
T ss_dssp HHHTTTT---TTCC---SSSSS-----SSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhc---cccc---ccchh-----hHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 5543210 0000 00011 1245666666666665 678999987766666778887777766666666554
Q ss_pred hhcccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002832 812 YANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYA 852 (875)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 852 (875)
++ ++.+.|++|.+|+.+|+++++++++.|+.|++.+++
T Consensus 844 ~~---~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 844 WG---WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp SS---STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred hh---hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 43 566889999999999999999999999999865543
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-128 Score=1203.76 Aligned_cols=846 Identities=22% Similarity=0.343 Sum_probs=682.0
Q ss_pred chhHHHHhhhhc-cccccCCHHHHHHHcCCCC-CCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHH
Q 002832 4 KAETMEAVLKEA-VDLENVPMEEVFETLRCNK-EGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAA 80 (875)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~ 80 (875)
|.++++++++|. .+||.++.+|++++|+++. +|||++||++|+++||+|++++++ .+.|+.|++||++|+.++|+++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~a 117 (1034)
T 3ixz_A 38 RKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVA 117 (1034)
T ss_pred chhhHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHH
Confidence 456778889987 7899999999999999994 799999999999999999998766 5788899999999999999999
Q ss_pred HHHHHHHHhC---CC---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCC
Q 002832 81 AIMAIALANG---GG---KPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVP 154 (875)
Q Consensus 81 ~il~~~~~~~---~~---~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~ 154 (875)
++++++.+.. .+ ....|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||
T Consensus 118 a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~ 197 (1034)
T 3ixz_A 118 AAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVV 197 (1034)
T ss_pred HHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCC
Confidence 9998876421 11 11346778888888899999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCC----------CceeecceeccCceeEEEEEecchhhh
Q 002832 155 GDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG----------DSVYSGSTCKQGEIEAVVIATGVHTFF 224 (875)
Q Consensus 155 GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~----------~~v~~Gt~v~~G~~~~~V~~tG~~T~~ 224 (875)
||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+|+++++|++||++|++
T Consensus 198 GDiV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~ 277 (1034)
T 3ixz_A 198 GDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTII 277 (1034)
T ss_pred CcEEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHh
Confidence 9999999999999999999999889999999999999999764 569999999999999999999999999
Q ss_pred hhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHH
Q 002832 225 GKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (875)
Q Consensus 225 g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~ 303 (875)
|||++++++. .+++|+++.++++..++..++++..++.+ +.+...+.+|.+.+..++++++++|||+||+++++++++
T Consensus 278 GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~ 356 (1034)
T 3ixz_A 278 GRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFF-IVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSL 356 (1034)
T ss_pred hHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHH
Confidence 9999998876 67899999999998875443333222222 222334567888889999999999999999999999999
Q ss_pred HHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCC--------------C--ChHHHHHHHH
Q 002832 304 GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKG--------------V--DADAVVLMAA 367 (875)
Q Consensus 304 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~--------------~--~~~~~l~~~~ 367 (875)
+++||+|+|++||+++++|+||++++||||||||||+|+|+|.++++...... . ....++..++
T Consensus 357 ~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 436 (1034)
T 3ixz_A 357 TAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLT 436 (1034)
T ss_pred HHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998765321000 0 0124455555
Q ss_pred Hhccc---------------cccChHHHHHHHhcC----ChHHHhhcccEEEEecCCCCCceEEEEEEcC---CCeEEEE
Q 002832 368 RASRV---------------ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDS---EGKMHRV 425 (875)
Q Consensus 368 ~~~~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~---~g~~~~~ 425 (875)
.|+.. ..+||.|.|++.+.. +....+..++.++++||+|++|+|++++... +++++++
T Consensus 437 lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~ 516 (1034)
T 3ixz_A 437 LCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLV 516 (1034)
T ss_pred HhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEE
Confidence 55321 125789999887642 3344567889999999999999998887643 3678899
Q ss_pred EcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc-----------CCCCCCeeEE
Q 002832 426 SKGAPEQILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-----------ESSGGPWQFI 484 (875)
Q Consensus 426 ~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~-----------~~~e~~l~~l 484 (875)
+|||||.++++|+. +++.++.+.+..++++.+|+||+++||+.+++.+. +..|++|+|+
T Consensus 517 ~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~l 596 (1034)
T 3ixz_A 517 MKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFA 596 (1034)
T ss_pred EeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEE
Confidence 99999999999963 34567788999999999999999999999865321 1247899999
Q ss_pred EEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------Ccccc
Q 002832 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALL 542 (875)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~~~ 542 (875)
|+++++||+||+++++|++|+++||+|+|+|||++.||.++|+++||..+... ..+++
T Consensus 597 Glv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1034)
T 3ixz_A 597 GLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVIN 676 (1034)
T ss_pred EEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEe
Confidence 99999999999999999999999999999999999999999999999643210 12344
Q ss_pred cccccccCCcccHHHHhhhCc--EEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhc
Q 002832 543 GQNKDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSA 619 (875)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~a 619 (875)
|.+.+ .++++++.+.++++. +|+|++|+||.++|+.+|+.|++|+|+|||+||+||||+||+||||| +|+|+||++
T Consensus 677 g~~l~-~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~a 755 (1034)
T 3ixz_A 677 GMQLK-DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNA 755 (1034)
T ss_pred cHhhh-hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHh
Confidence 44443 245566777776664 99999999999999999999999999999999999999999999999 999999999
Q ss_pred cCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcCHHHHHHHHHhhccc-cccccCC
Q 002832 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDGT-IMTISKD 697 (875)
Q Consensus 620 ADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~-~~~l~~~ 697 (875)
||+|+.++|+++|+.+|++||++|+||+|++.|.+++|++.++.++++.+ .+++|++|+|++|+|+++|++ ++++++|
T Consensus 756 AD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e 835 (1034)
T 3ixz_A 756 ADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYE 835 (1034)
T ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999997776655443 467799999999999999986 6999999
Q ss_pred CCCC------CCCCC-c-hhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhc-CcCCc-ccccc---------cCCccchhh
Q 002832 698 RVKP------SPLPD-S-WKLAEIFTT-GVILGGYLAMMTVIFFWAAYQT-DFFPR-TFGVS---------SLHEKDIDD 757 (875)
Q Consensus 698 ~~~~------~~~~~-~-~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~~~~---------~~~~~~~~~ 757 (875)
++.+ |++|+ . ...++++.+ ++..|+++++.+++.|++.+.. ++.+. .++.. +..+.....
T Consensus 836 ~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1034)
T 3ixz_A 836 KAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQE 915 (1034)
T ss_pred CCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccc
Confidence 8743 33331 2 222344444 4556888888888777665432 22111 01110 000000000
Q ss_pred H--------HhHHHHHHHHHHHHHHH-HHHHHhcCCCccccC---chHHHHHHHHHHHHHHHHHHHhhc--ccccccCch
Q 002832 758 W--------KKLASAIYLQVSTISQA-LIFVTRARSWSFVDR---PGLLLVLAFAVAQLIATLIAVYAN--WSFAAIEGV 823 (875)
Q Consensus 758 ~--------~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 823 (875)
| ...+++++|.+++++|+ ++|++|+++.+.+.. .|+++++++++.+++..+ ..|.+ ..++.+.|+
T Consensus 916 ~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~-~~~~p~~~~~f~~~~l 994 (1034)
T 3ixz_A 916 WTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCF-LCYCPGMPNIFNFMPI 994 (1034)
T ss_pred cchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHH-HHHhhhHHHHhcCCCC
Confidence 0 01256778888888886 679999987664432 366666655544433322 22322 235578889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002832 824 GWGWAGVVWLYNLIFYIPLDFIKFFIRYA 852 (875)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 852 (875)
+|.+|++++++++++++++|++|++.|++
T Consensus 995 ~~~~w~~~~~~~~~~~~~~e~~K~~~r~~ 1023 (1034)
T 3ixz_A 995 RFQWWLVPMPFGLLIFVYDEIRKLGVRCC 1023 (1034)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999876
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-127 Score=1196.06 Aligned_cols=841 Identities=22% Similarity=0.347 Sum_probs=677.5
Q ss_pred Hhhhhc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 002832 10 AVLKEA-VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIA 86 (875)
Q Consensus 10 ~~~~~~-~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~ 86 (875)
+.+++. .+||..+.+|++++|+++ .+|||++|+++|+++||+|++++++ ++.|+.|+++|++|++++|+++++++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~ 118 (1028)
T 2zxe_A 39 ELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFL 118 (1028)
T ss_dssp TTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHH
T ss_pred HHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 444444 689999999999999998 6899999999999999999999864 6788999999999999999999999988
Q ss_pred HHhCC---C---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEE
Q 002832 87 LANGG---G---KPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISV 160 (875)
Q Consensus 87 ~~~~~---~---~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l 160 (875)
++... + ...+|+++++++++++++++++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l 198 (1028)
T 2zxe_A 119 AYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEV 198 (1028)
T ss_dssp HHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEE
T ss_pred HHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEE
Confidence 64211 1 11256778888888999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccccceEEEecCCeeeeccccCCCCeeeecCCCC----------ceeecceeccCceeEEEEEecchhhhhhhhhh
Q 002832 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGD----------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHL 230 (875)
Q Consensus 161 ~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~----------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~ 230 (875)
++||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|.++++|++||++|.+|||+++
T Consensus 199 ~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~ 278 (1028)
T 2zxe_A 199 KGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATL 278 (1028)
T ss_dssp ETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHH
T ss_pred CCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHh
Confidence 99999999999999987899999999999999999875 59999999999999999999999999999999
Q ss_pred hccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 002832 231 VDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (875)
Q Consensus 231 ~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~ 309 (875)
++++ .+++|+|+.++++..++..+.++..++.+++ ..+.+.+|...+..++++++++|||+||++++++++.+++||+
T Consensus 279 ~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ma 357 (1028)
T 2zxe_A 279 ASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 357 (1028)
T ss_dssp HHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHh
Confidence 9886 6789999999999887654433332222222 2223456778888888999999999999999999999999999
Q ss_pred hcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEe--cc-CC-----------CCh--HHHHHHHHHhccc-
Q 002832 310 LQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI--FA-KG-----------VDA--DAVVLMAARASRV- 372 (875)
Q Consensus 310 ~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~--~~-~~-----------~~~--~~~l~~~~~~~~~- 372 (875)
|+|++||+++++|+||++|+||||||||||+|+|+|.+++... +. .+ .++ +.++.+++.|+..
T Consensus 358 k~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~ 437 (1028)
T 2zxe_A 358 RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAV 437 (1028)
T ss_dssp TTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCE
T ss_pred hCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCe
Confidence 9999999999999999999999999999999999999876421 10 00 011 2456666666421
Q ss_pred --------------cccChHHHHHHHhcC----ChHHHhhcccEEEEecCCCCCceEEEEEEcC---CCeEEEEEcCcHH
Q 002832 373 --------------ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDS---EGKMHRVSKGAPE 431 (875)
Q Consensus 373 --------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~---~g~~~~~~KGa~e 431 (875)
..+||.|.|++.++. +....+..++.++++||+|++|||+++++.. +|+++.++|||||
T Consensus 438 ~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e 517 (1028)
T 2zxe_A 438 FQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPE 517 (1028)
T ss_dssp ECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHH
T ss_pred eecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcH
Confidence 135889999987653 3334456789999999999999999998853 5778899999999
Q ss_pred HHHHhccC----------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc-----------CCCCCCeeEEEEeccC
Q 002832 432 QILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-----------ESSGGPWQFIGLMPLF 490 (875)
Q Consensus 432 ~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~-----------~~~e~~l~~lG~i~~~ 490 (875)
.++++|.. +++.++.+.+.+++++++|+||+++||+.+++.+. +..|+|++|+|+++++
T Consensus 518 ~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~ 597 (1028)
T 2zxe_A 518 RILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMI 597 (1028)
T ss_dssp HHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEE
T ss_pred HHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccC
Confidence 99999963 34567788899999999999999999999865321 1237899999999999
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------Ccccccccccc
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALLGQNKDE 548 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~~~~~~~~~ 548 (875)
||+|||++++|++|+++||+++|+|||++.||.++|+++||..+... ..+++|.+++.
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 99999999999999999999999999999999999999999743211 12445555443
Q ss_pred cCCcccHHHHhhhCc--EEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-CccHHHhhccCEEec
Q 002832 549 SIVALPVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLT 625 (875)
Q Consensus 549 ~~~~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~gtd~ak~aADivL~ 625 (875)
+.++++++++.+++ +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||+|++
T Consensus 678 -~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~ 756 (1028)
T 2zxe_A 678 -LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILL 756 (1028)
T ss_dssp -CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEET
T ss_pred -CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEec
Confidence 55667788888876 99999999999999999999999999999999999999999999999 799999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcCHHHHHHHHHhhccc-cccccCCCCCC--
Q 002832 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDGT-IMTISKDRVKP-- 701 (875)
Q Consensus 626 ~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~-- 701 (875)
+|||++|++++++||++|+||+|++.|.+++|+..++.++.+.+ ..+.|++|+|++|+|+++|++ ++++++|++.+
T Consensus 757 ~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~ 836 (1028)
T 2zxe_A 757 DDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDI 836 (1028)
T ss_dssp TCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhh
Confidence 99999999999999999999999999999999987766655443 456899999999999999986 68899887643
Q ss_pred ----CCCCC--chhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhc-CcCCc-cccc---------ccCCccchh-------
Q 002832 702 ----SPLPD--SWKLAEIFTT-GVILGGYLAMMTVIFFWAAYQT-DFFPR-TFGV---------SSLHEKDID------- 756 (875)
Q Consensus 702 ----~~~~~--~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~~~---------~~~~~~~~~------- 756 (875)
|++++ +...++.+.. ++..|+++++++++.|++.+.. ++.+. .++. +...+....
T Consensus 837 m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1028)
T 2zxe_A 837 MKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQR 916 (1028)
T ss_dssp GGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHH
T ss_pred hccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhh
Confidence 22222 2222344444 5577999998888776654421 11100 0000 000000000
Q ss_pred -hHHhHHHHHHHHHHHHHHH-HHHHHhcCCCcccc--CchHHHHHHHHHHHHHHHHHHHhhc-ccccccCchhhHHHHHH
Q 002832 757 -DWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD--RPGLLLVLAFAVAQLIATLIAVYAN-WSFAAIEGVGWGWAGVV 831 (875)
Q Consensus 757 -~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 831 (875)
......++++|..++++|+ ++|++|+++.+++. .+|+++++++++.+++..++.+.+. ..++.+.|++|.+|+++
T Consensus 917 ~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~ 996 (1028)
T 2zxe_A 917 KIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCA 996 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHH
Confidence 0112357778888888886 67899998765432 4677776666655444443333221 23456788888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 002832 832 WLYNLIFYIPLDFIKFFIRYA 852 (875)
Q Consensus 832 ~~~~~~~~~~~~~~k~~~r~~ 852 (875)
+++++++++++|++|++.|++
T Consensus 997 ~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 997 FPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHcc
Confidence 899999999999999998865
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-123 Score=1162.89 Aligned_cols=836 Identities=25% Similarity=0.345 Sum_probs=663.9
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCC-
Q 002832 16 VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGG- 92 (875)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~- 92 (875)
.+||..+.+|++++|+++ .+|||++|+++|+++||+|+++.++ ++.|+.|++||++|++++|+++++++++++....
T Consensus 3 ~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~ 82 (995)
T 3ar4_A 3 EAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 82 (995)
T ss_dssp TTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred chhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 569999999999999998 5799999999999999999999865 6788899999999999999999999998864321
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCe--EEEEecCCcCCCcEEEEecCCcccc
Q 002832 93 --KPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGK--WMEEDAAILVPGDIISVKLGDIIPA 168 (875)
Q Consensus 93 --~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~--~~~I~~~~Lv~GDiv~l~~G~~vPa 168 (875)
....|.+++++++++++++.++++||+|+++++++|+++.+++++|+|||+ +++|+++||||||+|.|++||+|||
T Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 83 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccc
Confidence 123688888888888999999999999999999999999999999999987 6999999999999999999999999
Q ss_pred ceEEEe--cCCeeeeccccCCCCeeeecCCC-------------CceeecceeccCceeEEEEEecchhhhhhhhhhhcc
Q 002832 169 DARLLE--GDPLKIDQSALTGESLPVTKGPG-------------DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS 233 (875)
Q Consensus 169 D~~ll~--g~~l~VdeS~LTGEs~pv~K~~~-------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 233 (875)
||+|++ +..+.||||+|||||.|+.|+++ |.+|+||.+.+|.++++|++||++|.+|||++++++
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred cEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 999965 45689999999999999999987 689999999999999999999999999999999988
Q ss_pred c-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c----ccCCchh----hHHHHHHHHHHhcCCchHHHHHHHHHH
Q 002832 234 T-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYP-I----QHRKYRP----GIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (875)
Q Consensus 234 ~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~----~~~~~~~llv~~iP~~Lp~~~~i~~~~ 303 (875)
+ .+++|+|+.+++++.++..++++.+++.+++.+. . .+.+|.. .+..++++++++|||+||++++++++.
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~ 322 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLAL 322 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 6 6789999999999887654443333332222211 1 1112322 344667889999999999999999999
Q ss_pred HHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEe--------------ccCCCC-----------
Q 002832 304 GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI--------------FAKGVD----------- 358 (875)
Q Consensus 304 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~--------------~~~~~~----------- 358 (875)
+++||+++|+++|+++++|+||++|+||||||||||+|+|+|.+++... ...+..
T Consensus 323 ~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 402 (995)
T 3ar4_A 323 GTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKP 402 (995)
T ss_dssp HHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEE
T ss_pred HHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccccccc
Confidence 9999999999999999999999999999999999999999999876421 000000
Q ss_pred --------hHHHHHHHHHhccc------------cccChHHHHHHHhcCCh-------H-------------HHhhcccE
Q 002832 359 --------ADAVVLMAARASRV------------ENQDAIDAAIVGMLADP-------K-------------EARANIQE 398 (875)
Q Consensus 359 --------~~~~l~~~~~~~~~------------~~~~~~~~ai~~~~~~~-------~-------------~~~~~~~~ 398 (875)
...+..+++.|+.. ..+||.|.|++.++.+. . ..+..++.
T Consensus 403 ~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 482 (995)
T 3ar4_A 403 IRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKK 482 (995)
T ss_dssp CCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEE
T ss_pred ccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCce
Confidence 11234445555421 12689999987543210 0 13456889
Q ss_pred EEEecCCCCCceEEEEEEcCCC-----eEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHH--HhcCCeE
Q 002832 399 VHFLPFNPTDKRTALTYIDSEG-----KMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKF--AERGLRS 461 (875)
Q Consensus 399 l~~~pf~~~~k~~sv~~~~~~g-----~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~~~G~rv 461 (875)
++.+||+|+||||+++++..+| +...++|||||.|+++|.. +++.++.+.+.++++ +++|+||
T Consensus 483 ~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRv 562 (995)
T 3ar4_A 483 EFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRC 562 (995)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEE
T ss_pred EEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceE
Confidence 9999999999999999986665 5788999999999999963 245677888899999 9999999
Q ss_pred EEEEEEecCCCC----------cCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCC
Q 002832 462 LAVAYQEVPDGR----------KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531 (875)
Q Consensus 462 l~~A~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi 531 (875)
+++|||+++..+ .+..|+|++|+|+++++||+|||++++|++||++||+++|+|||++.||.++|+++||
T Consensus 563 La~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi 642 (995)
T 3ar4_A 563 LALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI 642 (995)
T ss_dssp EEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred EEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCc
Confidence 999999875432 1234789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe
Q 002832 532 GTNMY--PSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (875)
Q Consensus 532 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam 609 (875)
..... ...+++|++.+. ++++++.+++++..+|||++|+||.++|+.+|++|+.|+|+|||+||+||||+|||||||
T Consensus 643 ~~~~~~i~~~~~~g~~~~~-l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam 721 (995)
T 3ar4_A 643 FGENEEVADRAYTGREFDD-LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721 (995)
T ss_dssp SCTTCCCTTTEEEHHHHHT-SCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE
T ss_pred CCCCCcccceEEEchhhhh-CCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe
Confidence 65321 134667766653 666778888899999999999999999999999999999999999999999999999999
Q ss_pred cCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCcCHHHHHHHHHhhc
Q 002832 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA-LIWKFDFPPFMVLIIAILND 688 (875)
Q Consensus 610 g~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~ 688 (875)
|+|+|+||++||+++++|+|++|++++++||++|+||+|++.|.+++|+..++.++++. +.++.|++|+|++|+|+++|
T Consensus 722 g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d 801 (995)
T 3ar4_A 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 801 (995)
T ss_dssp TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTT
T ss_pred CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998766655443 34567899999999999999
Q ss_pred cc-cccccCCCCCC------CCCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--cCCccc-cc----------
Q 002832 689 GT-IMTISKDRVKP------SPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTD--FFPRTF-GV---------- 747 (875)
Q Consensus 689 ~~-~~~l~~~~~~~------~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~-~~---------- 747 (875)
.+ ++++++|++.+ |+++. +...++.+..+++.|+++++.+++.|++..... .....+ ..
T Consensus 802 ~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (995)
T 3ar4_A 802 GLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDH 881 (995)
T ss_dssp HHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCC
T ss_pred HHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccc
Confidence 76 68888887532 22222 233345677777889998888776554432110 000000 00
Q ss_pred ccCCccchhhH-HhHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---CchHHHHHHHHHHHHHHHHHHHhhc--cccccc
Q 002832 748 SSLHEKDIDDW-KKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAVYAN--WSFAAI 820 (875)
Q Consensus 748 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~ 820 (875)
....+.....+ ....++++|.+++++|+ +.|++|+++.+++. ..|+++++++++.+++..+ ..|.+ ..++.+
T Consensus 882 ~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~-~~~~p~~~~~f~~ 960 (995)
T 3ar4_A 882 PHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFL-ILYVDPLPMIFKL 960 (995)
T ss_dssp SCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHH-HHHSTHHHHHTTC
T ss_pred ccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHH-HHHHHHHHHhhcc
Confidence 00000000000 12356777777788886 57899987654332 2356666665544433332 23322 124567
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002832 821 EGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYAL 853 (875)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~ 853 (875)
.+++|..|++++++++++++++|++|++.|+|+
T Consensus 961 ~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~ 993 (995)
T 3ar4_A 961 KALDLTQWLMVLKISLPVIGLDEILKFIARNYL 993 (995)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 788888888899999999999999999988774
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-87 Score=799.26 Aligned_cols=524 Identities=23% Similarity=0.348 Sum_probs=450.4
Q ss_pred CchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEE-CCeEEEEecCCcCCCcEEEEecCCccccceEE
Q 002832 95 PDWQDFV-GIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARL 172 (875)
Q Consensus 95 ~~~~~~~-~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~l 172 (875)
..|++.+ .++++++++.+++.++++|+.+++++|.++.+++++|+| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 4566665 555778888999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred EecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHH
Q 002832 173 LEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFC 251 (875)
Q Consensus 173 l~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~ 251 (875)
++|++ .||||+|||||.|+.|++|+.+|+||.+.+|.++++|++||.+|.+|||.++++++ .+++|+|+.+++++.++
T Consensus 265 l~G~~-~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEGRS-FVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSSCE-EEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EECce-EeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Confidence 99997 79999999999999999999999999999999999999999999999999999887 67899999999999887
Q ss_pred HHHHHHHHHHHHHHhhhccc-CCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEE
Q 002832 252 ICSIAVGMIVEIIVMYPIQH-RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVL 330 (875)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i 330 (875)
+.++++..++.+++++.... ..|..++..++++++++|||+|++++++++..+..+++|+|+++|+++++|++|++|+|
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEE
Confidence 65554444444444333322 24778899999999999999999999999999999999999999999999999999999
Q ss_pred EecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCce
Q 002832 331 CSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKR 410 (875)
Q Consensus 331 ~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~ 410 (875)
|||||||||+|+|+|.++. ..+.++++++.+++..+. .++||++.|+++++.+. +.......+|++..++
T Consensus 424 ~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~-~s~hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g~ 493 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEH-QSEHPLANAIVHAAKEK-----GLSLGSVEAFEAPTGK 493 (736)
T ss_dssp EECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHH-SSCCHHHHHHHHHHHTT-----CCCCCCCSCCCCCTTT
T ss_pred EEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhh-cCCChHHHHHHHHHHhc-----CCCccCcccccccCCc
Confidence 9999999999999999865 235677788877766543 45679999999876431 2222334577777766
Q ss_pred EEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccC
Q 002832 411 TALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLF 490 (875)
Q Consensus 411 ~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~ 490 (875)
.... ..+|+. +.+|+++.+.+.+... ..+.+..++++.+|+|++++|++. +++|+++++
T Consensus 494 gv~~--~~~g~~--~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~ 552 (736)
T 3rfu_A 494 GVVG--QVDGHH--VAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552 (736)
T ss_dssp EEEE--CSSSSC--EEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEE
T ss_pred eEEE--EECCEE--EEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEee
Confidence 4322 235553 4569999887765433 245566788999999999999854 899999999
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
|++||+++++|++||++|++++|+|||+..+|.++|+++||. +++++++|
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P 602 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMP 602 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecCH
Confidence 999999999999999999999999999999999999999984 37999999
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i 650 (875)
+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+|+|+++++||+|++++|++.+++++++||++++|||+|+
T Consensus 603 ~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl 682 (736)
T 3rfu_A 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNL 682 (736)
T ss_dssp HHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hcCCcCHHHH
Q 002832 651 IYAVSITIRIVLGFMLLALI-WKFDFPPFMV 680 (875)
Q Consensus 651 ~~~l~~ni~~~~~~~~~~~~-~~~~~~~~~~ 680 (875)
.|++.+|+..+....+.++. +++.++|+.-
T Consensus 683 ~~a~~yN~~~iplAag~l~p~~G~~l~P~~a 713 (736)
T 3rfu_A 683 FFAFIYNVLGVPLAAGVLYPLTGLLLSPMIA 713 (736)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTSSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhHHHH
Confidence 99999998766544322222 3445677643
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-84 Score=784.26 Aligned_cols=525 Identities=25% Similarity=0.380 Sum_probs=438.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCe
Q 002832 99 DFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPL 178 (875)
Q Consensus 99 ~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l 178 (875)
.++.++++++++.+++.++++|+++++++++++.+++++|+|||++++|+++||+|||+|.|++||+|||||+|++|++
T Consensus 176 ~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~- 254 (723)
T 3j09_A 176 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 254 (723)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCe-
Confidence 4455666667777777777777788899999999999999999999999999999999999999999999999999997
Q ss_pred eeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHH
Q 002832 179 KIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAV 257 (875)
Q Consensus 179 ~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~ 257 (875)
.||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++|+|+.+++++.+++..+++
T Consensus 255 ~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~ 334 (723)
T 3j09_A 255 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLL 334 (723)
T ss_dssp EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999987 67899999999999887655544
Q ss_pred HHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCc
Q 002832 258 GMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (875)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGT 337 (875)
..++.++.++...+.++..++..++++++++|||+|++++++++..+..+++|+|+++|+++++|+||++|++|||||||
T Consensus 335 ~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGT 414 (723)
T 3j09_A 335 VAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGT 414 (723)
T ss_dssp HHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHH
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCc
Confidence 44443443333334567778899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEEEc
Q 002832 338 LTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYID 417 (875)
Q Consensus 338 LT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~ 417 (875)
||+|+|+|.++.. . +.++++++.+++.++. .++||++.|+++++.+........+..+..| .+. +.
T Consensus 415 LT~g~~~v~~~~~--~--~~~~~~~l~~aa~~e~-~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~-----g~g-~~--- 480 (723)
T 3j09_A 415 LTKGKPEVTDLVP--L--NGDERELLRLAAIAER-RSEHPIAEAIVKKALEHGIELGEPEKVEVIA-----GEG-VV--- 480 (723)
T ss_dssp TSCSCCEEEEEEE--S--SSCHHHHHHHHHHHHT-TCCSHHHHHHHHHHHHTTCCCCSCCCCEEET-----TTE-EE---
T ss_pred cccCceEEEEEEe--C--CCCHHHHHHHHHHHhc-cCCCchhHHHHHHHHhcCCCcCCccceEEec-----CCc-eE---
Confidence 9999999998652 2 4567778887776654 4567999999887532110001111111111 111 00
Q ss_pred CCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCCh
Q 002832 418 SEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDS 497 (875)
Q Consensus 418 ~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 497 (875)
...+.+|+++.+.+.... .++.+.+..++++.+|+|++++|++. +++|+++++|++||++
T Consensus 481 ----~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~~~~ 540 (723)
T 3j09_A 481 ----ADGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESA 540 (723)
T ss_dssp ----ETTEEEECHHHHHHTTCC---CCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSCTTH
T ss_pred ----EEEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcchhH
Confidence 013567999887664332 13456677888999999999999854 8999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHH
Q 002832 498 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIV 577 (875)
Q Consensus 498 ~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV 577 (875)
+++|++||++|++++|+|||+..+|.++|+++|+. .+|+|++|+||.++|
T Consensus 541 ~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~~~v 590 (723)
T 3j09_A 541 KPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKSEEV 590 (723)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHHHHH
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHHHHH
Confidence 99999999999999999999999999999999984 379999999999999
Q ss_pred HHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657 (875)
Q Consensus 578 ~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n 657 (875)
+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+++++++++.+++++++||++|+||++|+.|++++|
T Consensus 591 ~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n 669 (723)
T 3j09_A 591 KKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYN 669 (723)
T ss_dssp HHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hhcCCcCHHHHHHHHHhhcc
Q 002832 658 IRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDG 689 (875)
Q Consensus 658 i~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~ 689 (875)
+..+...++.+. ++++.++|+.-.+...+.++
T Consensus 670 ~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~ 702 (723)
T 3j09_A 670 VILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSV 702 (723)
T ss_dssp HHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHhhhhccccccCHHHHHHHHhccHH
Confidence 875544332221 24557888764444333333
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-85 Score=777.04 Aligned_cols=525 Identities=25% Similarity=0.370 Sum_probs=437.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCe
Q 002832 99 DFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPL 178 (875)
Q Consensus 99 ~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l 178 (875)
.++.++++++++.+++.++++|++++++++.++.+++++|+|||++++|+++||+|||+|.+++||+|||||+|++|++
T Consensus 98 ~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~- 176 (645)
T 3j08_A 98 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176 (645)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcE-
Confidence 4555666677777777777777778889999999999999999999999999999999999999999999999999997
Q ss_pred eeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHH
Q 002832 179 KIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAV 257 (875)
Q Consensus 179 ~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~ 257 (875)
.||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++|+|+.+++++.+++..+++
T Consensus 177 ~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~ 256 (645)
T 3j08_A 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLL 256 (645)
T ss_dssp EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999987 67899999999999887655444
Q ss_pred HHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEEEecccCc
Q 002832 258 GMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (875)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGT 337 (875)
..++.++.++...+.++..++..++++++++|||+||+++++++..+..+++|+|+++|+++++|+||++|++|||||||
T Consensus 257 ~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGT 336 (645)
T 3j08_A 257 VAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGT 336 (645)
T ss_dssp HHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGT
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCccc
Confidence 44443443333334556777888899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEEEc
Q 002832 338 LTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYID 417 (875)
Q Consensus 338 LT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~ 417 (875)
||+|+|+|.++.. . +.++++++.+++.++. .+.||++.|+++++.+.. .+..+..+|++...+.. ..
T Consensus 337 LT~~~~~v~~~~~--~--~~~~~~~l~~aa~~e~-~s~hPla~Aiv~~a~~~g-----~~~~~~~~~~~~~g~g~-~~-- 403 (645)
T 3j08_A 337 LTKGKPEVTDLVP--L--NGDERELLRLAAIAER-RSEHPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGV-VA-- 403 (645)
T ss_dssp SSSSCCEEEEEEE--S--SSCHHHHHHHHHHHHT-TCCSHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEE-EE--
T ss_pred ccCCCeEEEEEEe--C--CCCHHHHHHHHHHHhh-cCCChhHHHHHHHHHhcC-----CCcCCccceEEecCCce-EE--
Confidence 9999999998652 2 4567788887776654 456799999988753211 11100111111111110 00
Q ss_pred CCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCCh
Q 002832 418 SEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDS 497 (875)
Q Consensus 418 ~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 497 (875)
..+.+|+++.+.+.... .++.+.+..++++++|+|+++++++. +++|+++++|++||++
T Consensus 404 -----~~v~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~~~~ 462 (645)
T 3j08_A 404 -----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESA 462 (645)
T ss_dssp -----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCTTTH
T ss_pred -----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCchhHH
Confidence 13567999887664322 23456677888999999999999854 8999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHH
Q 002832 498 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIV 577 (875)
Q Consensus 498 ~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV 577 (875)
+++|++||++|++++|+|||+..+|.++|+++|+. .+|++++|+||.++|
T Consensus 463 ~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~~~v 512 (645)
T 3j08_A 463 KPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKSEEV 512 (645)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHHHHH
Confidence 99999999999999999999999999999999984 379999999999999
Q ss_pred HHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657 (875)
Q Consensus 578 ~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n 657 (875)
+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+++++++++.+++++++||++|+||++|+.|++++|
T Consensus 513 ~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N 591 (645)
T 3j08_A 513 KKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYN 591 (645)
T ss_dssp HHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hhcCCcCHHHHHHHHHhhcc
Q 002832 658 IRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDG 689 (875)
Q Consensus 658 i~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~ 689 (875)
+..+...++.+. ++++.++|+.-.+...+.+.
T Consensus 592 ~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~ 624 (645)
T 3j08_A 592 VILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSV 624 (645)
T ss_dssp HHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHhHhhhcccccCHHHHHHHHhcchH
Confidence 875544332211 24456788764444333333
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-35 Score=310.62 Aligned_cols=259 Identities=22% Similarity=0.329 Sum_probs=199.3
Q ss_pred HHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHH
Q 002832 304 GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIV 383 (875)
Q Consensus 304 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~ 383 (875)
++.+++|+|+++|+++++|.++++++||||||||||+|+|.|.++. ++++++.+++.... .+.||+..++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~-~s~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEA-LSSHPIAKAIV 75 (263)
Confidence 5678999999999999999999999999999999999999997642 33455555554433 45678988887
Q ss_pred HhcCChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEE
Q 002832 384 GMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLA 463 (875)
Q Consensus 384 ~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~ 463 (875)
.++.+.. .+....-.|.....+ ++. ...++. .+..|+++ +|.+ +.
T Consensus 76 ~~~~~~g-----~~~~~~~~~~~~~G~-g~~-~~~~~~--~~~~G~~~-------------------------~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQG-----VKILEVKDFKEISGI-GVR-GKISDK--IIEVKKAE-------------------------NNND-IA 120 (263)
Confidence 7653211 110000000000000 000 000000 01112111 3444 45
Q ss_pred EEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccc
Q 002832 464 VAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 543 (875)
Q Consensus 464 ~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~ 543 (875)
++++. .+.|.+.+.|+++|++++++++|++.|+++.|+|||+..++..+++++|+.
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------- 176 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ----------- 176 (263)
Confidence 55544 789999999999999999999999999999999999999999999999984
Q ss_pred ccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEE
Q 002832 544 QNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (875)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADiv 623 (875)
++|+.+.|++|...++.++..++.|+|+|||.||++|+++|++|+++|++++.+++.||++
T Consensus 177 -------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 177 -------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Confidence 2477778999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCChhHHHHHHHHHHHHHHHHHHH
Q 002832 624 LTEPGLSVIISAVLTSRAIFQRMKNY 649 (875)
Q Consensus 624 L~~~~~~~i~~~i~~gR~~~~~i~~~ 649 (875)
++++++..++.+++++|+++++|++|
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 99999999999999999999999976
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=5.4e-28 Score=261.25 Aligned_cols=279 Identities=28% Similarity=0.406 Sum_probs=207.3
Q ss_pred HHHHHHhcCCccccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHH
Q 002832 304 GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIV 383 (875)
Q Consensus 304 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~ 383 (875)
|.++++|+|+++|+++++|++++++++|||||||||.+.+.+.++. ... + +.++++.+++..+ ..+.||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~--~~~-~-~~~~~l~~~~~~e-~~s~hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLV--PLN-G-DERELLRLAAIAE-RRSEHPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEE--ESS-S-CHHHHHHHHHHHT-TTCCSHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEE--eCC-C-CHHHHHHHHHHHh-hcCCCHHHHHHH
Confidence 6789999999999999999999999999999999999999887654 222 4 6777777776654 346789999987
Q ss_pred HhcCChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEE
Q 002832 384 GMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLA 463 (875)
Q Consensus 384 ~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~ 463 (875)
..+..........+.....+ .. +. .. ..+.+|+++.+.+..... ++.+.+..+.+..+|.++++
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~-----G~-~~--~~-----~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEHGIELGEPEKVEVIA-----GE-GV--VA-----DGILVGNKRLMEDFGVAV---SNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHTTCCCCCCSCEEEET-----TT-EE--EE-----TTEEEECHHHHHHTTCCC---CHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccccccceeec-----CC-Ce--EE-----EEEEECCHHHHHhcCCCc---cHHHHHHHHHHHhCCCeEEE
Confidence 76432100000001111110 00 00 00 123457766554322211 12344556778889999999
Q ss_pred EEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccc
Q 002832 464 VAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 543 (875)
Q Consensus 464 ~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~ 543 (875)
+++.. .+.+.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+.
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~----------- 203 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------- 203 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-----------
Confidence 99864 789999999999999999999999999999999999999999999999984
Q ss_pred ccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEE
Q 002832 544 QNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (875)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADiv 623 (875)
..|..+.|+.|...++.++.. +.++|+||+.||.+|.++|++|++++++.+..++.||++
T Consensus 204 -------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 204 -------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred -------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEE
Confidence 246666799999999999888 889999999999999999999999998777778889999
Q ss_pred ecCCChhHHHHHHHHHHHHHHHHH
Q 002832 624 LTEPGLSVIISAVLTSRAIFQRMK 647 (875)
Q Consensus 624 L~~~~~~~i~~~i~~gR~~~~~i~ 647 (875)
+.++++..+..+++.+|++++|||
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EeCCCHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999986
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=222.73 Aligned_cols=110 Identities=30% Similarity=0.515 Sum_probs=105.2
Q ss_pred HHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCeeeecCCCCceeec
Q 002832 124 AAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSG 203 (875)
Q Consensus 124 ~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~G 203 (875)
++++|+++.+++++|+|||++++|++++|+|||+|.+++||+|||||+|++|+. .||||+|||||.|+.|.+|+.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCCCEEEeC
Confidence 467788889999999999999999999999999999999999999999999985 8999999999999999999999999
Q ss_pred ceeccCceeEEEEEecchhhhhhhhhhhccc
Q 002832 204 STCKQGEIEAVVIATGVHTFFGKAAHLVDST 234 (875)
Q Consensus 204 t~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 234 (875)
|.+.+|.++++|++||.+|.+|+|.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999988754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-28 Score=224.10 Aligned_cols=116 Identities=29% Similarity=0.480 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHhhccCCcEEEEECCe------EEEEecCCcCCCcEEEEecCCccccceEEEecCCeeeeccccCCCCee
Q 002832 118 ENNAGNAAAALMASLAPKSKVLRDGK------WMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLP 191 (875)
Q Consensus 118 e~~~~~~~~~l~~~~~~~~~V~rdg~------~~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~g~~l~VdeS~LTGEs~p 191 (875)
++|+++++++|+++.+++++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCcc
Confidence 56788899999999999999999764 7899999999999999999999999999999998 7999999999999
Q ss_pred eecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhccc
Q 002832 192 VTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234 (875)
Q Consensus 192 v~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 234 (875)
+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|+|.++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-26 Score=243.84 Aligned_cols=276 Identities=29% Similarity=0.392 Sum_probs=200.8
Q ss_pred cccchhhhhccCceEEEecccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhh
Q 002832 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394 (875)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 394 (875)
+|+++++|++++++.|||||+||||.|+++|.++. ... + +.+.++.+++..... ..++...++.+.+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~--~~~-~-~~~~~~~~~~~~~~~-s~~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIV--GFN-H-SEDELLQIAASLEAR-SEHPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEE--ESS-S-CHHHHHHHHHHHHTT-CCSHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEE--ecC-C-CHHHHHHHHHHhhcc-CCCHHHHHHHHHHHhcCCCCC
Confidence 58999999999999999999999999999998854 333 3 677777776655433 345777776655422110001
Q ss_pred cccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCc
Q 002832 395 NIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK 474 (875)
Q Consensus 395 ~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~ 474 (875)
....+...+- .. .... .++..+ ..|.++.+.+...... +....+..++.+.+.+++..
T Consensus 76 ~~~~~~~~~g---~~-~~~~---~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPG---KG-VEGI---VNGRRY--MVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETT---TE-EEEE---ETTEEE--EEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCC---CE-EEEE---ECCEEE--EEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 1122222221 11 1111 133333 3477777766543221 23456778899998888754
Q ss_pred CCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCccc
Q 002832 475 ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALP 554 (875)
Q Consensus 475 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~ 554 (875)
.++|.+.+.|+++|++.++++.|++.|+++.++||++...+..+.+++|+.
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------------------- 184 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD---------------------- 184 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh----------------------
Confidence 789999999999999999999999999999999999999999999999984
Q ss_pred HHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHH
Q 002832 555 VDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 555 ~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~ 634 (875)
..|..+.|.+|...++.+.+..+ ++|+||+.||.+|+++|++|++||++++..+++||.++..+++..+..
T Consensus 185 --------~~f~~~~~~~k~~~~k~~~~~~~-~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 185 --------DYFAEVLPHEKAEKVKEVQQKYV-TAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp --------EEECSCCGGGHHHHHHHHHTTSC-EEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred --------hHhHhcCHHHHHHHHHHHHhcCC-EEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 24777889999999999998774 589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002832 635 AVLTSRAIFQRMKNYTIYAVS 655 (875)
Q Consensus 635 ~i~~gR~~~~~i~~~i~~~l~ 655 (875)
+++++|++++++++++.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988864
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-24 Score=231.92 Aligned_cols=145 Identities=12% Similarity=0.028 Sum_probs=115.9
Q ss_pred cCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHh--hhCcEEE
Q 002832 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELI--EKADGFA 566 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vfa 566 (875)
..+++||+++++++.|+++|++++|+|||+..++.++++++|+..... .+....++ .++..+...+ +..++++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~---~i~~n~l~--~~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMD--FDENGVLKGFKGELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE---EEEEECEE--ECTTSBEEEECSSCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc---eEEeeeEE--EcccceeEeccccccchhh
Confidence 458999999999999999999999999999999999999999864321 01111100 0011000000 1134578
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHh---hCCceEEec-------CccHHHhhccCEEecCCChhHHHHHH
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK---KADIGIAVA-------DATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk---~AdVGIamg-------~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
+..|.+|...+..+++.|+.|+|+|||+||+||++ +|||||+|| +++|++++++||||++|++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 88899999999999999999999999999999955 999999999 79999999999999999999999988
Q ss_pred HH
Q 002832 637 LT 638 (875)
Q Consensus 637 ~~ 638 (875)
.+
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=171.26 Aligned_cols=139 Identities=20% Similarity=0.345 Sum_probs=117.5
Q ss_pred cCCCChHHHHHHHHHhcc--ccccChHHHHHHHhcCCh--HHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCc
Q 002832 354 AKGVDADAVVLMAARASR--VENQDAIDAAIVGMLADP--KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGA 429 (875)
Q Consensus 354 ~~~~~~~~~l~~~~~~~~--~~~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa 429 (875)
..|.+.+.++.+|+.++. ....||+|.|++.+.... ...+..|+.++++||||++|||+++++..+|+.++++|||
T Consensus 10 ~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGA 89 (170)
T 3gwi_A 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGA 89 (170)
T ss_dssp TTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCC
Confidence 357788899999999884 356799999999886532 2335679999999999999999999987778888999999
Q ss_pred HHHHHHhccC----------ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCC---cCCCCCCeeEEEEeccCCC
Q 002832 430 PEQILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR---KESSGGPWQFIGLMPLFDP 492 (875)
Q Consensus 430 ~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~---~~~~e~~l~~lG~i~~~D~ 492 (875)
||.|+++|+. +++.++.+.+.++.|+++|+|||++|||.++..+ ....|++|+|+|+++|-|.
T Consensus 90 pE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 90 LQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred cHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 9999999973 4567889999999999999999999999987643 2357999999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.43 E-value=9.1e-14 Score=139.85 Aligned_cols=126 Identities=21% Similarity=0.365 Sum_probs=106.5
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 579 (875)
++++|+++|+++.++||++...+..+++++|+.. +|... .+|...++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 8999999999999999999999999999999842 12222 556676666
Q ss_pred HhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC----hhHHHHHHHHHHHHHHHHHHHHH
Q 002832 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTI 651 (875)
Q Consensus 580 lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~----~~~i~~~i~~gR~~~~~i~~~i~ 651 (875)
+.++ .+.++|+||+.||.+|+++|++|++++++++.+++.||+++.+++ +..+.+.+..+|..+++|++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6544 467999999999999999999999999999999999999998764 77788899999999999999999
Q ss_pred HHHHHH
Q 002832 652 YAVSIT 657 (875)
Q Consensus 652 ~~l~~n 657 (875)
|.+.+|
T Consensus 182 ~~~~~~ 187 (189)
T 3mn1_A 182 EGHHHH 187 (189)
T ss_dssp TTC---
T ss_pred cccccc
Confidence 988776
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.1e-12 Score=142.04 Aligned_cols=151 Identities=15% Similarity=0.151 Sum_probs=110.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC-----cccccccccccCCcccHHHHhhhCcEEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-----SALLGQNKDESIVALPVDELIEKADGFA 566 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~vfa 566 (875)
+++|++.+.++.|+++|+++.|+||++...+..+.+++|+..-.... ..++|.-.+ ....+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~--------------~~~~~ 243 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLG--------------EVVSA 243 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEES--------------CCCCH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecc--------------cccCh
Confidence 78999999999999999999999999999999999999984210000 000000000 00111
Q ss_pred EeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHHHHHH
Q 002832 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~~~~i 646 (875)
+-.|+...++.+.++-..+.+.|+|||.||.+|+++|++|++| ++.+..++.||.++..+++..++.+++......+++
T Consensus 244 kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~ 322 (335)
T 3n28_A 244 QTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKL 322 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCC
T ss_pred hhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhh
Confidence 2234444555555554556799999999999999999999999 899999999999999999999999999888888888
Q ss_pred HHHHHHHHHHH
Q 002832 647 KNYTIYAVSIT 657 (875)
Q Consensus 647 ~~~i~~~l~~n 657 (875)
++|+.+.+.+|
T Consensus 323 ~~~~~~~~~~~ 333 (335)
T 3n28_A 323 SWKSKEGHHHH 333 (335)
T ss_dssp CCC--------
T ss_pred ccccccccccc
Confidence 89988888776
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=4.1e-11 Score=119.30 Aligned_cols=132 Identities=20% Similarity=0.222 Sum_probs=104.2
Q ss_pred CCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHH
Q 002832 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHK 573 (875)
Q Consensus 494 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 573 (875)
.++..++|++|+++|+++.++||++...+..+.+++|+.. .|... ..|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------------~~~~~--k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLGK--LEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEESC--SCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------------eecCC--CCc
Confidence 3466799999999999999999999999999999999852 12211 345
Q ss_pred HHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHH----HHHHHHHHHHHH
Q 002832 574 YEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII----SAVLTSRAIFQR 645 (875)
Q Consensus 574 ~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~----~~i~~gR~~~~~ 645 (875)
...++.+.++ | +.++|+||+.||.+|+++|+++++++++.+..++.||+++.+++-..++ +.+...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 6655544332 4 5799999999999999999999999999999999999999887655555 444456777888
Q ss_pred HHHHHHHHHHHH
Q 002832 646 MKNYTIYAVSIT 657 (875)
Q Consensus 646 i~~~i~~~l~~n 657 (875)
++.++.|..+.+
T Consensus 165 ~~~~~~~~~~~~ 176 (180)
T 1k1e_A 165 FDTAQGFLKSVK 176 (180)
T ss_dssp HHCHHHHHHHGG
T ss_pred hhhccchhhhhc
Confidence 888887776543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.18 E-value=3e-11 Score=121.52 Aligned_cols=124 Identities=18% Similarity=0.248 Sum_probs=102.0
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE--eCHHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--VFPEHKYEIV 577 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar--~sP~~K~~iV 577 (875)
+|+.|+++|+++.++||++...+..+.+++|+.. +|.. -.|+-...+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 3999999999999999999999999999999852 1222 2466666677
Q ss_pred HHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC----hhHHHHHHHHHHHHHHHHHHHHHHH
Q 002832 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTIYA 653 (875)
Q Consensus 578 ~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~----~~~i~~~i~~gR~~~~~i~~~i~~~ 653 (875)
+.++-....++|+||+.||.+|++.|+++++++++.+..++.||+++.+++ +..+.+.+...|..++++.++..++
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~~ 183 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQ 183 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 776656667999999999999999999999999999999999999998877 5556666677888888877766553
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.3e-11 Score=122.70 Aligned_cols=101 Identities=21% Similarity=0.329 Sum_probs=82.6
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHH
Q 002832 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (875)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 578 (875)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHH
Confidence 35999999999999999999999999999999852 12222 34555555
Q ss_pred HHhh----CCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhH
Q 002832 579 RLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (875)
Q Consensus 579 ~lq~----~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~ 631 (875)
.+.+ ....++|+||+.||.+|+++|+++++|+++.+.+++.||+++.+++-..
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G 163 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHG 163 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTT
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCC
Confidence 4443 2456999999999999999999999999999999999999998776444
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-10 Score=115.31 Aligned_cols=104 Identities=24% Similarity=0.317 Sum_probs=86.4
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 579 (875)
++++|+++|+++.++||++...+..+++++|+. +|+.. ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------~~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------VLHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------eEeCC--CChHHHHHH
Confidence 899999999999999999999999999999983 12222 456666665
Q ss_pred HhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHH
Q 002832 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 580 lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
+.++ .+.+.|+||+.||.+|++.|++|++++++.+..++.||+++.+++..+++..+
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 5543 35689999999999999999999999999999999999999988865555444
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-10 Score=118.61 Aligned_cols=97 Identities=24% Similarity=0.347 Sum_probs=83.5
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 579 (875)
+++.|+++|+++.++||++...+..+++++|+.. +|..+ .+|...++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 8999999999999999999999999999999842 23322 456777766
Q ss_pred HhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC
Q 002832 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (875)
Q Consensus 580 lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~ 628 (875)
+.++ .+.|+|+||+.||.+|+++|+++++++++.+.+++.||+++.+++
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCC
Confidence 6554 567999999999999999999999999999999999999998775
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=114.31 Aligned_cols=134 Identities=19% Similarity=0.155 Sum_probs=95.9
Q ss_pred cCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH--HhCCCCC
Q 002832 457 RGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR--RLGMGTN 534 (875)
Q Consensus 457 ~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~--~lGi~~~ 534 (875)
++.+.+++-....-.+.......+-..++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ ++|+.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-- 76 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-- 76 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--
Confidence 456666665443211111111222256677777776 3899999999999999999 67778888 45542
Q ss_pred CCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEec
Q 002832 535 MYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg 610 (875)
+|. .+++|...++.+.++ .+.++|+||+.||.+|++.|+++++|+
T Consensus 77 -----------------------------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~ 125 (168)
T 3ewi_A 77 -----------------------------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA 125 (168)
T ss_dssp -----------------------------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT
T ss_pred -----------------------------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC
Confidence 011 134677777766554 346899999999999999999999999
Q ss_pred CccHHHhhccCEEecCCChhH
Q 002832 611 DATDAARSASDIVLTEPGLSV 631 (875)
Q Consensus 611 ~gtd~ak~aADivL~~~~~~~ 631 (875)
++.+.+++.||+|+.+++=..
T Consensus 126 na~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 126 DACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp TCCHHHHTTCSEECSSCTTTT
T ss_pred ChhHHHHHhCCEEeCCCCCcc
Confidence 999999999999998766554
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2.6e-10 Score=118.02 Aligned_cols=148 Identities=20% Similarity=0.113 Sum_probs=105.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--Cc-cc--ccccc-cc-cC------------
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SS-AL--LGQNK-DE-SI------------ 550 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~-~~--~~~~~-~~-~~------------ 550 (875)
..++.+++.++|++|++.|++++++||++...+..+++++|+...... .. +. .|+.. .. .+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 345788999999999999999999999999999999999998531100 00 11 11111 00 00
Q ss_pred -----------------------CcccHHHHhhh--CcE-----EEEeCH--HHHHHHHHHHhhC-C---CEEEEEcCCc
Q 002832 551 -----------------------VALPVDELIEK--ADG-----FAGVFP--EHKYEIVKRLQAR-K---HICGMTGDGV 594 (875)
Q Consensus 551 -----------------------~~~~~~~~~~~--~~v-----far~sP--~~K~~iV~~lq~~-g---~~Vam~GDG~ 594 (875)
+.+.++++.+. ..+ +-.+.| .+|...++.+.+. | +.|.++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 00111122111 111 223445 6899888887654 2 4689999999
Q ss_pred cCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 595 NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
||.+|++.|++|++|+++.+..|+.||+++.+++-..+.++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999998888888888775
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=8.1e-10 Score=107.83 Aligned_cols=102 Identities=28% Similarity=0.320 Sum_probs=81.6
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeC--HHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF--PEHKYEIV 577 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s--P~~K~~iV 577 (875)
++++|+++|+++.++||++...+..+.+++|+... |.... |+--..+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------~~~~kpk~~~~~~~~ 88 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------FQGVVDKLSAAEELC 88 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------ECSCSCHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------ecccCChHHHHHHHH
Confidence 89999999999999999999999999999998521 11112 22223333
Q ss_pred HHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhH
Q 002832 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (875)
Q Consensus 578 ~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~ 631 (875)
+.+.-..+.+.|+||+.||.+|+++|+++++++++.+..++.||+++.+++...
T Consensus 89 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 89 NELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTT
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCc
Confidence 333333457999999999999999999999999999999999999999988444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.7e-10 Score=126.69 Aligned_cols=166 Identities=13% Similarity=0.122 Sum_probs=112.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccc--------------cccCCc---cc
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNK--------------DESIVA---LP 554 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~--------------~~~~~~---~~ 554 (875)
++++++.++++.|++ |+++.++|||+...+..+.+.+++.... ....+..++. +..+.. .+
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGEL-HGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEE-EEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhh-cccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 568999999999999 9999999999977777777777763211 0000000000 000000 01
Q ss_pred HHHHhhhC------cEEE----EeCHHHHHHHHHHHhhCC--CEEEEEcCCccCHHHHhhC----CceEEecCccHHHhh
Q 002832 555 VDELIEKA------DGFA----GVFPEHKYEIVKRLQARK--HICGMTGDGVNDAPALKKA----DIGIAVADATDAARS 618 (875)
Q Consensus 555 ~~~~~~~~------~vfa----r~sP~~K~~iV~~lq~~g--~~Vam~GDG~NDapALk~A----dVGIamg~gtd~ak~ 618 (875)
+ +.+.+. ..+. -..+.+|...++.++... +.|+++|||.||.+|++.| ++|||| ++.+.+|+
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 000000 0011 113567988888776543 5699999999999999999 999999 99999999
Q ss_pred ccCEEecCCChhHHHHHH----HHHHHHHHHHHH-------HHHHHHHHHHHHHH
Q 002832 619 ASDIVLTEPGLSVIISAV----LTSRAIFQRMKN-------YTIYAVSITIRIVL 662 (875)
Q Consensus 619 aADivL~~~~~~~i~~~i----~~gR~~~~~i~~-------~i~~~l~~ni~~~~ 662 (875)
+||+|+.+++...+..++ ..||+.+ |+-| ++.+..+.|+..++
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEVL 312 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHHH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHHH
Confidence 999999998887776665 5688888 6666 66666667766554
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.87 E-value=5e-09 Score=118.59 Aligned_cols=136 Identities=20% Similarity=0.226 Sum_probs=106.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE----
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG---- 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar---- 567 (875)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+.........+. +..+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~------------------dg~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIV------------------DGTLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEE------------------TTEEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEe------------------CCEEEeeEccC
Confidence 789999999999999999999999999999999999999842100000000 0011112
Q ss_pred -eCHHHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHHHHH
Q 002832 568 -VFPEHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (875)
Q Consensus 568 -~sP~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR~~ 642 (875)
..+..|.++++.+.++ | +.+.|+|||.||.+|+++|++|+++ ++.+..++.||.++..+++..++.++.++|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1266777777766543 3 4689999999999999999999999 77888899999999999999999999988877
Q ss_pred HHHH
Q 002832 643 FQRM 646 (875)
Q Consensus 643 ~~~i 646 (875)
+++.
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=4.2e-09 Score=101.21 Aligned_cols=140 Identities=19% Similarity=0.302 Sum_probs=92.2
Q ss_pred ccCccccCcccceeeeEEeccCCCChHHHHHHHHHhccccccChHHHHHHHhcCCh-HHHhhccc--EEEEecCCCCCce
Q 002832 334 KTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADP-KEARANIQ--EVHFLPFNPTDKR 410 (875)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~-~~~~~~~~--~l~~~pf~~~~k~ 410 (875)
..||+|-|++.+.++. .. .+.++++++.+|+.++ ..+.+|+++|+++++.+. .......+ ..+..||++..++
T Consensus 13 ~~~tit~gnr~vt~v~--~~-~g~~e~elL~lAAs~E-~~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFI--PA-QGVDEKTLADAAQLAS-LADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEE--EC-TTSCHHHHHHHHHHTT-SSCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEE--ec-CCCCHHHHHHHHHHHh-CcCCCHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 4799999999998864 22 4678899999888876 455689999999876432 10000000 1235789988886
Q ss_pred EEEEEEcCCCeEEEEEcCcHHHHHHhccCC-hHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEecc
Q 002832 411 TALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPL 489 (875)
Q Consensus 411 ~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~ 489 (875)
.++.+ +|+ .+.+|+++.|.+++... ...+..+.+.+++++++|.+++++|... +++|++++
T Consensus 89 ~Gv~v---~G~--~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DNR--MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TTE--EEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CCE--EEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 77643 564 46789987766655311 0112346777889999999999999754 89999999
Q ss_pred CCCCCC
Q 002832 490 FDPPRH 495 (875)
Q Consensus 490 ~D~lr~ 495 (875)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999997
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.80 E-value=7.3e-09 Score=105.32 Aligned_cols=129 Identities=22% Similarity=0.233 Sum_probs=95.5
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE---
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--- 567 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar--- 567 (875)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+...+ ..+-.+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~~~~~~~----------------~~~~~~~~~ 135 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF--SNTLIVEN----------------DALNGLVTG 135 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE--EEEEEEET----------------TEEEEEEEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc--cceeEEeC----------------CEEEeeecc
Confidence 468999999999999999999999999999999999999985310 00110000 000000
Q ss_pred --eCHHHHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHH
Q 002832 568 --VFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 568 --~sP~~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~ 638 (875)
..+..|.+.++.+.++ ...+.|+||+.||.+|+++|+++++| ++.+..++.||+++.+++|..+..++++
T Consensus 136 ~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 136 HMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp SCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 1234566666554432 35688999999999999999999999 7788889999999999999999888765
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.76 E-value=1e-08 Score=111.44 Aligned_cols=127 Identities=17% Similarity=0.173 Sum_probs=95.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE----
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG---- 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar---- 567 (875)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+.... ...+...+ . ..-.+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f--~~~l~~~d--g--------------~~tg~i~~~ 240 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAF--SNTVEIRD--N--------------VLTDNITLP 240 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE--EECEEEET--T--------------EEEEEECSS
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEE--EEEEEeeC--C--------------eeeeeEecc
Confidence 48999999999999999999999999999999999999985210 00000000 0 00011
Q ss_pred -eCHHHHHHHHHHHhh----CCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 568 -VFPEHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 568 -~sP~~K~~iV~~lq~----~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
..+..|.++++.+.+ ....+.|+||+.||.+|+++|++|+++ ++.+..++.||.++..+++..+..+++
T Consensus 241 ~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 241 IMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred cCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 134566666655433 235689999999999999999999999 577778889999999999999887664
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.72 E-value=3.2e-08 Score=105.27 Aligned_cols=71 Identities=23% Similarity=0.317 Sum_probs=59.4
Q ss_pred EeCHH--HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 567 GVFPE--HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 567 r~sP~--~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
...|. .|...++.+.+. ..-|+++||+.||.+|++.|++|+|||++.+..|++||+|..+++=.++.++|+
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHH
Confidence 34454 677777666543 245899999999999999999999999999999999999998888888888886
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=2.8e-08 Score=99.41 Aligned_cols=106 Identities=25% Similarity=0.320 Sum_probs=83.1
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHHH
Q 002832 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (875)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 579 (875)
++++|+++|+++.++||++...+..+.+++|+.. +|... ..|...++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~------------------------------~~~~~--kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH------------------------------LYQGQ--SNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce------------------------------eecCC--CCCHHHHHH
Confidence 8999999999999999999999999999999852 11111 234444444
Q ss_pred HhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHH-HHHH
Q 002832 580 LQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAVL 637 (875)
Q Consensus 580 lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~-~~i~ 637 (875)
+.++ | +.++|+||+.||.+++++|+++++++++.+..++.||+++.+.+-..++ ++++
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 3322 3 5689999999999999999999999988888888999999887656555 5443
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=4.1e-08 Score=98.89 Aligned_cols=128 Identities=23% Similarity=0.337 Sum_probs=88.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE-eCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG-VFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar-~sP 570 (875)
++.|+++++++.|++.|+++.++||+....+..+.+.+|+... ........+ ..... .+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~----------~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKD---GKLTG----------DVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEET---TEEEE----------EEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEEC---CEEcC----------CcccCccCC
Confidence 5678999999999999999999999998888888888887421 000000000 00000 00000 123
Q ss_pred HHHHHHHHHHhh-CC---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHH
Q 002832 571 EHKYEIVKRLQA-RK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 571 ~~K~~iV~~lq~-~g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~ 634 (875)
..|...++.+.+ .| +.+.++||+.||.+|++.|+++++|+ +.+..++.||.++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 567666555443 33 35899999999999999999999998 56677889999998767877654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.2e-07 Score=101.48 Aligned_cols=67 Identities=15% Similarity=0.150 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
..|..-++.+.+. | .-|+++||+.||.+|++.|++|+||+++.+..|++||+|..+++=.++.++|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 4577777766543 3 35899999999999999999999999999999999999998888888888886
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.61 E-value=8.7e-08 Score=93.05 Aligned_cols=111 Identities=20% Similarity=0.242 Sum_probs=87.3
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe--CH
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV--FP 570 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~--sP 570 (875)
..|++.+++++|++.|+++.++||.+...+..+.+++|+.. .|... .|
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------~~~~~kp~~ 86 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------------------------------IYTGSYKKL 86 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------------------------------EEECC--CH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------------------------------hccCCCCCH
Confidence 35678899999999999999999999999999999999842 12111 23
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~ 633 (875)
+--..+.+.+.-..+.+.|+||+.||.++.++|+++++++++.+..++.||+++.+.+-..++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 332334444443445689999999999999999999999888888888999999887766666
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.2e-08 Score=101.98 Aligned_cols=117 Identities=23% Similarity=0.342 Sum_probs=89.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEE--EEeC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF--AGVF 569 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf--ar~s 569 (875)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+..- .......+ .++ ....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~--~~~~~~~~------------------~~~~~~~~~ 137 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM--ANRAIFED------------------GKFQGIRLR 137 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE--EEEEEEET------------------TEEEEEECC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh--eeeEEeeC------------------CceECCcCC
Confidence 7899999999999999999999999988877777 77776321 00000000 011 3456
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 570 P~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
|.+|...++.+ ..+.+.|+||+.||.+|++.|++|++|+++.+ .||+++ +++..+...++
T Consensus 138 ~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~--~~~~el~~~l~ 197 (201)
T 4ap9_A 138 FRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLV--KDLKELVDFIK 197 (201)
T ss_dssp SSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEE--SSHHHHHHHHH
T ss_pred ccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEE--ccHHHHHHHHH
Confidence 78899999988 45568899999999999999999999997776 799988 45777766654
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.2e-07 Score=100.68 Aligned_cols=66 Identities=23% Similarity=0.244 Sum_probs=46.7
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
+|..-++.+.+. | .-|.++||+.||.+|++.|++|+|||+|.+..|++||+|..+++=.++.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 477777766543 3 35899999999999999999999999999999999999998887788888774
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.50 E-value=3.1e-07 Score=94.88 Aligned_cols=146 Identities=21% Similarity=0.198 Sum_probs=99.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC---cccc-cccc-----------------cc-c
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS---SALL-GQNK-----------------DE-S 549 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~---~~~~-~~~~-----------------~~-~ 549 (875)
.+.+.+.+++++++++|++++++||.....+..+.+.+|+....... .+.. ++.. .. .
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 46788999999999999999999999999999999999975311100 0000 1000 00 0
Q ss_pred C--------------------CcccHHHHhhh----CcEE-----EEeCH--HHHHHHHHHHhhC-C---CEEEEEcCCc
Q 002832 550 I--------------------VALPVDELIEK----ADGF-----AGVFP--EHKYEIVKRLQAR-K---HICGMTGDGV 594 (875)
Q Consensus 550 ~--------------------~~~~~~~~~~~----~~vf-----ar~sP--~~K~~iV~~lq~~-g---~~Vam~GDG~ 594 (875)
. .....+++.++ .++. ....| ..|...++.+.++ | +.+.++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0 11112222222 2222 23333 3587777776543 2 4588999999
Q ss_pred cCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 595 NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
||.+|++.|++|++|+++.+..++.||+++.+.+-..+.++++
T Consensus 180 nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999988888999999997776667777765
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.8e-07 Score=97.41 Aligned_cols=67 Identities=21% Similarity=0.199 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCE--EecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADi--vL~~~~~~~i~~~i~ 637 (875)
..|..-++.+.+. | +.++++||+.||.+|++.|++|+|||+|.+..|++||. +..+++=.++..+|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4588777776553 3 35899999999999999999999999999999999984 666666777877775
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.49 E-value=7.2e-07 Score=89.83 Aligned_cols=127 Identities=15% Similarity=0.120 Sum_probs=95.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEE--EeC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA--GVF 569 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa--r~s 569 (875)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ......+.+. ..-. .-.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~~----------------~~~~~~~p~ 130 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDDSD----------------RVVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE-EEEEEECTTS----------------CEEEEECCS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee-cceeEEcCCc----------------eEEeeecCC
Confidence 6799999999999999 999999999999999999999985311 0011111110 0001 246
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 570 P~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
|+.|...++.+...+..+.|+||+.||.+|.+.|++++++....+..+.+++++. -+++..+...++
T Consensus 131 p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 8899999999988888999999999999999999999998654444444555542 366888877663
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.48 E-value=1.9e-07 Score=96.07 Aligned_cols=128 Identities=20% Similarity=0.265 Sum_probs=93.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... ...-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSVE-----------------RGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTSS-----------------SCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCCC-----------------CCCCCHH
Confidence 56899999999999999999999999999999999999975321 1222222111 0111234
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc---eEEecCcc-HHHhh-ccCEEecCCChhHHHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADAT-DAARS-ASDIVLTEPGLSVIISAVLTSR 640 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV---GIamg~gt-d~ak~-aADivL~~~~~~~i~~~i~~gR 640 (875)
--..+.+.+.-..+.+.|+||+.||..|+++|++ +|++|.+. +..++ .||+++ +++..+...++.|+
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 4455556665555679999999999999999999 99998443 44444 799998 66999998887664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.47 E-value=3.4e-07 Score=92.42 Aligned_cols=131 Identities=14% Similarity=0.074 Sum_probs=88.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-CCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-PSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ........+ . .+.. ......+|
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~-----~~~~~~~~ 149 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSD--G-----SFKE-----LDNSNGAC 149 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTT--S-----BEEE-----EECTTSTT
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCC--C-----ceec-----cCCCCCCc
Confidence 378999999999999999999999999999999999999853110 000000000 0 0000 00112345
Q ss_pred HHHHHHHHHH-hhCCCEEEEEcCCccCHHHHhh--CCceEEe--cCccHHHhhccCEEecCCChhHHHHHH
Q 002832 571 EHKYEIVKRL-QARKHICGMTGDGVNDAPALKK--ADIGIAV--ADATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 571 ~~K~~iV~~l-q~~g~~Vam~GDG~NDapALk~--AdVGIam--g~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
+.|.+.++.+ .-..+.+.|+||+.||.+|+++ +.+|+++ +++.+..++.||+++ +++..+...+
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 6677766554 4456789999999999999976 3345544 566777888999998 5577766543
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.47 E-value=5.3e-07 Score=94.65 Aligned_cols=66 Identities=23% Similarity=0.271 Sum_probs=55.2
Q ss_pred HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. ...|+++||+.||.+|++.|++|++||++.+..|+.||+|..+.+-.++.++++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 355555555442 345899999999999999999999999999999999999998888888888876
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.46 E-value=3.6e-07 Score=97.49 Aligned_cols=67 Identities=22% Similarity=0.218 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.+|..-++.+.+. | .-|+++||+.||.+|++.|++|+|||+|.+..|++||+|..+++=.++.++++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 3588888776654 3 35899999999999999999999999999999999999998888888888875
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=1.7e-07 Score=94.45 Aligned_cols=129 Identities=13% Similarity=0.100 Sum_probs=94.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+........++.++. . ...-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~-----------------~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-A-----------------PPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-S-----------------CCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-C-----------------CCCCCHH
Confidence 457899999999999999999999999999999999999843210011111111 0 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecCccHHHhhccCEEecCCChhHHHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~gtd~ak~aADivL~~~~~~~i~~~i~~gR 640 (875)
--..+.+.+.-....+.|+||+.||..|.++|++ +|+|++|.+..++.||+++ +++..+...++..|
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~~ 199 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhcc
Confidence 3334444444344568999999999999999999 9999988777788899998 56899988887544
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.40 E-value=2.7e-07 Score=97.51 Aligned_cols=66 Identities=24% Similarity=0.288 Sum_probs=56.8
Q ss_pred HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. .+-+.++||+.||.+|++.|++|++||++.+..|++||+|..+++=.++.++++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~ 269 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELK 269 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHH
Confidence 477666665543 345899999999999999999999999999999999999998888888888876
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.5e-07 Score=97.84 Aligned_cols=67 Identities=25% Similarity=0.234 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
..|..-++.+.+. | .-|+++||+.||.+|++.|++|+|||+|.+..|++||+|..+++=..+.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688777776543 3 35899999999999999999999999999999999999998877778888876
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.33 E-value=1.2e-06 Score=93.47 Aligned_cols=66 Identities=23% Similarity=0.195 Sum_probs=57.1
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+++.+..++.||+++.+.+-..+.++++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 788888777653 2 45899999999999999999999999999999999999998877788888775
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.30 E-value=7.4e-07 Score=91.12 Aligned_cols=128 Identities=16% Similarity=0.141 Sum_probs=85.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe---
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV--- 568 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~--- 568 (875)
+++|++.++++.|++.|+++.++|+.....+..+.+++|+..+..-...+. .+. ...+.+.-
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~---~~~------------~~~~~~~~~~~ 150 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLK---FYF------------NGEYAGFDETQ 150 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEE---ECT------------TSCEEEECTTS
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEE---EcC------------CCcEecCCCCC
Confidence 689999999999999999999999999999999999999853100000000 000 00011111
Q ss_pred ---CHHHHHHHHHHHhhC-C-CEEEEEcCCccCHHHHhhCCceEEecCc--cHHHhhccCEEecCCChhHHHHHH
Q 002832 569 ---FPEHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKKADIGIAVADA--TDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 569 ---sP~~K~~iV~~lq~~-g-~~Vam~GDG~NDapALk~AdVGIamg~g--td~ak~aADivL~~~~~~~i~~~i 636 (875)
.+..|-.+++.+.++ | ..+.|+||+.||.+|.++|+++|+++.+ .+.....+|+++ +++..+...+
T Consensus 151 ~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 151 PTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp GGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred cccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 123566666655433 4 5689999999999999999998888743 334455689988 4576665443
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.25 E-value=8.7e-07 Score=90.27 Aligned_cols=127 Identities=9% Similarity=0.106 Sum_probs=90.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.... ..-.|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~-----------------~kp~~ 145 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIVGSSLDGK-----------------LSTKE 145 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTSS-----------------SCSHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeeeccCCCCC-----------------CCCCH
Confidence 367899999999999999999999999999999999999985311 11111111100 00113
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc---eEEecCccHH--HhhccCEEecCCChhHHHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV---GIamg~gtd~--ak~aADivL~~~~~~~i~~~i~~ 638 (875)
+--..+.+.+.-....+.++||+.||..|.++|++ ++++|.+... .+..||+++ +++..+...+..
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 33344445554444578999999999999999999 8888855433 357899998 568888887764
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-06 Score=87.16 Aligned_cols=107 Identities=18% Similarity=0.160 Sum_probs=77.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE----
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG---- 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar---- 567 (875)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..- ........ +. ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~-~~~~~~~~---~~--------------~~~g~~~~~ 153 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL-IATDPEYR---DG--------------RYTGRIEGT 153 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE-EECEEEEE---TT--------------EEEEEEESS
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE-EEcceEEE---CC--------------EEeeeecCC
Confidence 5799999999999999999999999999999999999998521 00000000 00 00111
Q ss_pred -eCHHHHHHHHHHHh-hCC------CEEEEEcCCccCHHHHhhCCceEEecCccHHH
Q 002832 568 -VFPEHKYEIVKRLQ-ARK------HICGMTGDGVNDAPALKKADIGIAVADATDAA 616 (875)
Q Consensus 568 -~sP~~K~~iV~~lq-~~g------~~Vam~GDG~NDapALk~AdVGIamg~gtd~a 616 (875)
+.+..|.+.++.+. +.| +.+.|+||+.||.+|++.|++++++.......
T Consensus 154 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~ 210 (232)
T 3fvv_A 154 PSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLR 210 (232)
T ss_dssp CSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHHH
T ss_pred CCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHHH
Confidence 22467877765543 345 57999999999999999999999997544433
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.19 E-value=2.1e-06 Score=87.03 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=85.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+... ....+.+.... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~-----------------~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS--FDALASAEKLP-----------------YSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEECTTSS-----------------CCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhh--CcEEEeccccC-----------------CCCCChH
Confidence 5678999999999999999999999998888888888887421 11112111110 0011134
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe----cCccHHHhhccCEEecCCChhHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam----g~gtd~ak~aADivL~~~~~~~i~~ 634 (875)
--..+.+.+.-....+.++||+.||.+|++.|++++++ +++.+..++.||+++. ++..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHhH
Confidence 44455555554455689999999999999999999999 4445556788999883 4555543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.19 E-value=4.1e-06 Score=87.87 Aligned_cols=127 Identities=13% Similarity=0.172 Sum_probs=87.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|++....+..+.+.+|+.... ...++.++.... ..-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-----------------~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVPA-----------------GRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSSC-----------------CTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-hHheecCCccCC-----------------CCCCHH
Confidence 56799999999999999999999999988888888887764221 012222211110 111244
Q ss_pred HHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCC---ceEEecCc------------------------cHHHhhc-cCE
Q 002832 572 HKYEIVKRLQARK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-SDI 622 (875)
Q Consensus 572 ~K~~iV~~lq~~g-~~Vam~GDG~NDapALk~Ad---VGIamg~g------------------------td~ak~a-ADi 622 (875)
--..+.+.+.-.. +.+.++||+.||..|++.|+ +++++|++ .+..+++ ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 4455666665444 67899999999999999999 67777754 2333444 999
Q ss_pred EecCCChhHHHHHHHH
Q 002832 623 VLTEPGLSVIISAVLT 638 (875)
Q Consensus 623 vL~~~~~~~i~~~i~~ 638 (875)
++ +++..+...+..
T Consensus 245 v~--~~~~el~~~l~~ 258 (267)
T 1swv_A 245 TI--ETMQELESVMEH 258 (267)
T ss_dssp EE--SSGGGHHHHHHH
T ss_pred ec--cCHHHHHHHHHH
Confidence 98 568888777643
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.18 E-value=2e-06 Score=87.74 Aligned_cols=127 Identities=13% Similarity=0.094 Sum_probs=88.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+.+.. ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDVS-----------------YGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGSS-----------------CCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccCC-----------------CCCCChH
Confidence 46799999999999999999999999999999999999885421 1222221111 0111123
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc---eEEec-CccHHHhhc-cCEEecCCChhHHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVA-DATDAARSA-SDIVLTEPGLSVIISAVLTS 639 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV---GIamg-~gtd~ak~a-ADivL~~~~~~~i~~~i~~g 639 (875)
--..+.+.+.-....+.++||+.||..|.++|++ ++++| ++.+..++. ||+++ +++..+...++..
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 2333444443334568999999999999999999 66666 444544544 99988 5688888877643
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.17 E-value=6.3e-07 Score=99.55 Aligned_cols=109 Identities=13% Similarity=0.146 Sum_probs=75.8
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE---
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--- 567 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar--- 567 (875)
..++|++++.|+.||++|++|+|+||.....++.+|+++|+.-+.-+ ..+.|.++...- +-..-.+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~-~~Vig~~l~~~~----------dG~~tg~~~~ 288 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKE-EKVLGLRLMKDD----------EGKILPKFDK 288 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCG-GGEEEECEEECT----------TCCEEEEECT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCc-ceEEEeEEEEec----------CCceeeeecC
Confidence 35789999999999999999999999999999999999987432211 122232221100 0011122
Q ss_pred ----eCHHHHHHHHHHHhhC--C-CEEEEEcCCccCHHHHhh-CCceEEec
Q 002832 568 ----VFPEHKYEIVKRLQAR--K-HICGMTGDGVNDAPALKK-ADIGIAVA 610 (875)
Q Consensus 568 ----~sP~~K~~iV~~lq~~--g-~~Vam~GDG~NDapALk~-AdVGIamg 610 (875)
+..+.|...++.+.+. | ..+.++|||.||.+||++ +|.|+++.
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~li 339 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLI 339 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEE
T ss_pred ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEE
Confidence 2357899999876433 2 247788999999999996 67666653
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.9e-06 Score=89.40 Aligned_cols=123 Identities=18% Similarity=0.161 Sum_probs=85.8
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++... ..-.|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~~-----------------~Kp~~ 173 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL--FSEMLGGQSLPE-----------------IKPHP 173 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTTSSS-----------------CTTSS
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe--EEEEEecccCCC-----------------CCcCH
Confidence 35789999999999999999999999999999999999998531 112222211110 01124
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ecC----ccHHHhhccCEEecCCChhHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VAD----ATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg~----gtd~ak~aADivL~~~~~~~i~~ 634 (875)
+--..+.+.+.-....+.|+||+.||.+|.++|+++.. +.. +.+..+..||+++ +++..+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi--~~~~el~~ 240 (243)
T 2hsz_A 174 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILK 240 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGG
T ss_pred HHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEE--CCHHHHHH
Confidence 44455566665555678999999999999999998844 333 3444567899988 44665543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.08 E-value=3e-06 Score=86.64 Aligned_cols=126 Identities=9% Similarity=0.029 Sum_probs=91.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAVR-----------------LYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEecccC-----------------CCCcCHH
Confidence 56799999999999999999999999999888888888885321 1122211110 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe----cCccHHHhhccCEEecCCChhHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam----g~gtd~ak~aADivL~~~~~~~i~~~i~~ 638 (875)
--..+.+.+.-....+.|+||+.||..|.++|++++++ +++.+..+..+|+++ +++..+...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 34445555554446689999999999999999999999 555555567799998 568888887764
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=1.2e-05 Score=84.42 Aligned_cols=64 Identities=25% Similarity=0.303 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhhC-C-----CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K-----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g-----~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.+|..-++.+.+. | ..++++||+.||.+|++.|++|++|+++.+ . +|+++..+++-..+.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888777654 3 669999999999999999999999999888 4 7888888777777776665
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.07 E-value=2.7e-06 Score=86.01 Aligned_cols=114 Identities=4% Similarity=-0.058 Sum_probs=78.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|++ ..+..+.+.+|+... -..++.+.+... ..-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~--f~~~~~~~~~~~-----------------~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY--FDAIADPAEVAA-----------------SKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG--CSEECCTTTSSS-----------------CTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH--cceEeccccCCC-----------------CCCChH
Confidence 46799999999999999999999998 344566677777421 111222211110 011133
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCC
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~ 627 (875)
--..+.+.+.-....+.++||+.||.+|++.|+++++|.++.+..+ .||+++.+.
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~ 204 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDT 204 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSG
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCH
Confidence 3334445544444568999999999999999999999998777777 899988543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.07 E-value=2.8e-06 Score=85.99 Aligned_cols=123 Identities=16% Similarity=0.105 Sum_probs=79.7
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHH
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 572 (875)
+.|++.+.++.|++.|+++.++|++.........+.+|+.... ...+.+++... ..-.|+-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----------------~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDVTH-----------------HKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGCSS-----------------CTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhcCC-----------------CCCChHH
Confidence 4689999999999999999999999988888888888875321 11111111100 0001222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe----cCccHHHhhc-cCEEecCCChhHHHHHH
Q 002832 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSA-SDIVLTEPGLSVIISAV 636 (875)
Q Consensus 573 K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam----g~gtd~ak~a-ADivL~~~~~~~i~~~i 636 (875)
-..+.+.+.-....+.++||+.||.+|++.|+++++| +++.+..++. ||.++. ++..+...+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 2344444443344688999999999999999998887 3334444444 899884 466665555
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.7e-06 Score=86.63 Aligned_cols=124 Identities=14% Similarity=0.059 Sum_probs=86.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... ...-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 170 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLDG-----------------TRVNKNE 170 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------CCCCHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEeccccC-----------------CCCCCHH
Confidence 57899999999999999999999999999999999999985311 1111111110 0011122
Q ss_pred HHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCc---eEEecCccHH--HhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdV---GIamg~gtd~--ak~aADivL~~~~~~~i~~~i 636 (875)
--..+.+.+.-. ...+.++||+.||..|.++|++ ++++|.+... .+..||+++ +++..+...+
T Consensus 171 ~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l 239 (240)
T 3sd7_A 171 VIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIV--ENVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEE--SSSTTHHHHH
T ss_pred HHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEE--CCHHHHHHHh
Confidence 233444455444 5568999999999999999999 7777754433 357899998 4577776654
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.05 E-value=3.2e-06 Score=89.04 Aligned_cols=67 Identities=28% Similarity=0.329 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
..|..-++.+.+. | +.|+++||+.||.+|++.|++|+|||+|.+.+|++||+|..+++=.++.++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 4688877776553 3 35899999999999999999999999999999999999999888888988886
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.03 E-value=4.3e-06 Score=85.18 Aligned_cols=125 Identities=11% Similarity=0.083 Sum_probs=88.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 155 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEVR-----------------LFKPHQ 155 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTCH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhcc-----------------cCCCCh
Confidence 367899999999999999999999999999888988899985321 1122111110 011123
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe----cCccHHHhhccCEEecCCChhHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam----g~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
+--..+.+.+.-....+.++||+.||..|.++|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 333445555554445689999999999999999999999 344444556899988 5577776554
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.03 E-value=9.8e-06 Score=82.84 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=73.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~~~ 150 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTTLA-----------------KGKPDPD 150 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CC
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhhCC-----------------CCCCChH
Confidence 3789999999999999999999999754 66777888875321 1122111100 0111122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecC
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~ 626 (875)
-=..+.+.+.-....+.|+||+.||..|.++|+++++|.++.+..+ .||+++.+
T Consensus 151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s 204 (233)
T 3nas_A 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQ 204 (233)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSS
T ss_pred HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCC
Confidence 2244555555445678999999999999999999999987666566 89998854
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.01 E-value=6e-06 Score=84.33 Aligned_cols=125 Identities=14% Similarity=0.069 Sum_probs=88.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+.+.. ...-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~-----------------~~Kp~~~ 143 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY--FDLIVGGDTFG-----------------EKKPSPT 143 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTSSC-----------------TTCCTTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH--heEEEecCcCC-----------------CCCCChH
Confidence 5689999999999999999999999999988999999997421 11122221110 0112345
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCc--cHHHhhccCEEecCCChhHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~g--td~ak~aADivL~~~~~~~i~~~i~~ 638 (875)
--..+.+.+.-....+.|+||+.||.+|.++|++. |++..| .... ..+|.++ +++..+...+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~~ 210 (222)
T 2nyv_A 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMDN 210 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHHT
T ss_pred HHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHHH
Confidence 55556666655556789999999999999999988 666432 2222 5688887 568888776643
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.01 E-value=3.6e-06 Score=86.95 Aligned_cols=138 Identities=13% Similarity=0.046 Sum_probs=90.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHh--hhCcEEEEeC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELI--EKADGFAGVF 569 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vfar~s 569 (875)
+++|++.+.++.|+++|+++.++|+.....+..+.+ |+... ..++.+..... ...+.... .+...+-+-.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~---~~v~~~~~~~~---~~~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK---DRIYCNHASFD---NDYIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG---GGEEEEEEECS---SSBCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC---CeEEeeeeEEc---CCceEEecCCCCcccccccc
Confidence 689999999999999999999999999988888777 66321 12222211100 00000000 0000000112
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhc--cCEEecCCChhHHHHHHHHH
Q 002832 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA--SDIVLTEPGLSVIISAVLTS 639 (875)
Q Consensus 570 P~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~a--ADivL~~~~~~~i~~~i~~g 639 (875)
..+|.++++.+....+.+.|+||+.||.+|.++|++.++.....+..++. +|+++ +++..+...+...
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~~ 218 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIENV 218 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHTS
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHHh
Confidence 45788999998877889999999999999999999988753222233333 67766 6688888877543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.4e-05 Score=81.59 Aligned_cols=124 Identities=17% Similarity=0.130 Sum_probs=88.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.+.+.. ...-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~~-----------------~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSEEAG-----------------FFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHHHHT-----------------BCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEeccccC-----------------CCCcCHH
Confidence 5679999999999999 999999999999888888888874211 1111111100 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCC---ceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~Ad---VGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
--..+.+.+.-..+.+.++||+. ||..|.++|+ +++++|++.+..++.||+++ +++..+...++
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 33445555554456799999997 9999999999 67777877777777999998 56888877764
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.97 E-value=4.3e-06 Score=83.20 Aligned_cols=119 Identities=16% Similarity=0.105 Sum_probs=81.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+++|++.+.++.|++.|+++.++|++...... ..+.+|+.... ...+.+.+.. ...-.|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~~-----------------~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSGF-----------------VRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGCC-----------------CCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcCC-----------------CCCCCcH
Confidence 46899999999999999999999999987777 77788874210 1111111100 0011133
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCccHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
--..+.+.++-....+.++||+.||.+|++.|+++ ++|++|. . .||+++ +++..+...+
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 33455555554455689999999999999999997 8888776 2 688887 4566666543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.96 E-value=4.2e-06 Score=89.35 Aligned_cols=131 Identities=16% Similarity=0.175 Sum_probs=88.7
Q ss_pred CCCCChHHHHHHHHhC-CCcEEEEcCC---------------------CHHHHHHHHHHhCCCCCCCCCccccccccccc
Q 002832 492 PPRHDSAETIRRALNL-GVNVKMITGD---------------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDES 549 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~a-GI~v~miTGD---------------------~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~ 549 (875)
.+++++.+.++.+++. |+++...|.. ....+..+.++.|+...........++.
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4678999999999988 9998888876 3344455555556531100000000000
Q ss_pred CCcccHHHHhhhCcEEEEeCH--HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEE
Q 002832 550 IVALPVDELIEKADGFAGVFP--EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (875)
Q Consensus 550 ~~~~~~~~~~~~~~vfar~sP--~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADiv 623 (875)
....+....| ..|...++.+.++ | ..++|+||+.||.+|++.|++|++|+++.+..++.||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0012333333 3566666655443 3 458999999999999999999999999999999999999
Q ss_pred ecCCChhHHHHHHH
Q 002832 624 LTEPGLSVIISAVL 637 (875)
Q Consensus 624 L~~~~~~~i~~~i~ 637 (875)
+.+++-.++.++++
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 98877777877775
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.96 E-value=2.7e-05 Score=82.55 Aligned_cols=66 Identities=20% Similarity=0.128 Sum_probs=33.3
Q ss_pred HHHHHHHHHhhC-C----CE--EEEEcCCccCHHHHhhCCceEEecCcc---HHHhhc--cC-EEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K----HI--CGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--SD-IVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g----~~--Vam~GDG~NDapALk~AdVGIamg~gt---d~ak~a--AD-ivL~~~~~~~i~~~i~ 637 (875)
+|..-++.+.+. | .. +.++||+.||.+|++.|++||+|+++. +..++. || ++..+++-.++.++++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 466655554432 2 34 899999999999999999999999887 555543 78 8887777777777765
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.1e-05 Score=82.41 Aligned_cols=122 Identities=8% Similarity=0.045 Sum_probs=83.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDTG-----------------TIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSSS-----------------CCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEcccccC-----------------CCCCChH
Confidence 46899999999999999999999999999999999999985311 1111111110 0111233
Q ss_pred HHHHHHHHHhhCCC-EEEEEcCCccCHHHHhhCCc-eEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKH-ICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~-~Vam~GDG~NDapALk~AdV-GIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
--..+.+.+.-... .+.++||+.||..|.++|++ +|.++++.+ ..+|.++ +++..+...+.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 33455555554444 68999999999999999997 777776554 3577776 55888777664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.94 E-value=1e-05 Score=82.59 Aligned_cols=123 Identities=11% Similarity=0.063 Sum_probs=78.8
Q ss_pred CCCCChHHHHHHHHhC-CCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+.... ...+.+.+.. .+..|
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~------------------~~~k~ 152 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF--PFGAFADDAL------------------DRNEL 152 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC--SCEECTTTCS------------------SGGGH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc--CcceecCCCc------------------Cccch
Confidence 4679999999999999 9999999999998888888888885321 1112221110 00001
Q ss_pred HHH--HHHHHHHh--hCCCEEEEEcCCccCHHHHhhCC---ceEEecCccHHHhh--ccCEEecCCChhHHHHHH
Q 002832 571 EHK--YEIVKRLQ--ARKHICGMTGDGVNDAPALKKAD---IGIAVADATDAARS--ASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 571 ~~K--~~iV~~lq--~~g~~Vam~GDG~NDapALk~Ad---VGIamg~gtd~ak~--aADivL~~~~~~~i~~~i 636 (875)
..+ ..+.+.+. -..+.+.|+||+.||.+|.++|+ |++++|.+...... .||+++. ++..+...+
T Consensus 153 ~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l 225 (234)
T 2hcf_A 153 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHH
Confidence 111 22233333 22346899999999999999999 55555544333332 3898884 455555554
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.2e-05 Score=81.86 Aligned_cols=124 Identities=9% Similarity=0.064 Sum_probs=82.7
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCC---HHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeC
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s 569 (875)
+.|++.+.++.|++.|+++.++|+.. ........+.+|+.... ..++.+.+.. ...-.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEVL-----------------SYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHHHHT-----------------CCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheeccccC-----------------CCCCC
Confidence 48999999999999999999999999 88888888888874211 1111111100 00112
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEEe---cCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 570 P~~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVGIam---g~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
|+--..+.+.+.-..+.+.++||+. ||..|.+.|+++++| +++.+..++.+|.++ +++..+...++
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 3322333444433345689999999 999999999999999 332222344578777 56777776664
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.94 E-value=1.1e-05 Score=83.30 Aligned_cols=126 Identities=13% Similarity=0.066 Sum_probs=82.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+....+. |+........++.+++... ..-.|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~-----------------~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY-----------------GKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS-----------------CTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC-----------------CCCChH
Confidence 5789999999999999999999999887666666666 7753210012222222110 111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCccH----HHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATD----AARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~gtd----~ak~aADivL~~~~~~~i~~~i~ 637 (875)
--..+.+.+.-..+.+.++||+.||..|.++|+++ |.+..|.. ..+..||+++ +++..+...++
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 33344444444445689999999999999999984 44554432 2334699998 56888877664
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.93 E-value=4.6e-06 Score=83.51 Aligned_cols=121 Identities=15% Similarity=0.090 Sum_probs=85.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+++.. ...-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEFK-----------------ESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGCS-----------------SCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeeccccc-----------------CCCCChH
Confidence 46899999999999999999999999999999999999985321 1122221111 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec-Cc-cHHHhhccCEEecCCChhHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DA-TDAARSASDIVLTEPGLSVII 633 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg-~g-td~ak~aADivL~~~~~~~i~ 633 (875)
--..+.+.+.-....+.++||+.||..|.++|+++..+. .+ ....+..||.++ +++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~--~~~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLL--DSLTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEE--SSGGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHH--HHHHHHH
Confidence 344555555544566899999999999999999988885 22 444447789988 4465544
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.5e-05 Score=82.11 Aligned_cols=127 Identities=10% Similarity=0.027 Sum_probs=81.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+........++.+.+.. ...-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~-----------------~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK-----------------YGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS-----------------SCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC-----------------CCCCCC
Confidence 46789999999999999999999999887777766666 775321001222222111 011123
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCccH----HHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATD----AARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~gtd----~ak~aADivL~~~~~~~i~~~i~ 637 (875)
+--..+.+.+.-..+.+.|+||+.||..|.++|+++ |.+..|.. ..+..||+++ +++..+...++
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 333445555554455689999999999999999975 44443322 2234799998 56888777665
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.5e-05 Score=83.74 Aligned_cols=126 Identities=12% Similarity=0.147 Sum_probs=86.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.+++... ..-.|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-----------------~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT-PASTVFATDVVR-----------------GRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC-CSEEECGGGSSS-----------------CTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC-CceEecHHhcCC-----------------CCCCHH
Confidence 57899999999999999999999999998888888888864321 111222211110 011133
Q ss_pred HHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCC---ceEEecCc------------------------cHHHh-hccCE
Q 002832 572 HKYEIVKRLQARK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAAR-SASDI 622 (875)
Q Consensus 572 ~K~~iV~~lq~~g-~~Vam~GDG~NDapALk~Ad---VGIamg~g------------------------td~ak-~aADi 622 (875)
--..+.+.+.-.. +.+.|+||+.||..|.++|+ |+|++|.+ .+..+ ..||+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 3344555555555 67999999999999999999 56666632 23333 34999
Q ss_pred EecCCChhHHHHHHH
Q 002832 623 VLTEPGLSVIISAVL 637 (875)
Q Consensus 623 vL~~~~~~~i~~~i~ 637 (875)
++ +++..+...++
T Consensus 253 v~--~~~~el~~~l~ 265 (277)
T 3iru_A 253 VI--DSVADLETVIT 265 (277)
T ss_dssp EE--SSGGGTHHHHH
T ss_pred Ee--cCHHHHHHHHH
Confidence 98 56888887775
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=1.5e-05 Score=82.17 Aligned_cols=124 Identities=13% Similarity=0.074 Sum_probs=84.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDLK-----------------IYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEccccC-----------------CCCCCHH
Confidence 57899999999999999999999999999889999999984311 1122221110 0111244
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE---ecCccHHHhhcc-CEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA---VADATDAARSAS-DIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa---mg~gtd~ak~aA-DivL~~~~~~~i~~~i 636 (875)
--..+.+.+.-....+.|+||+.||..+.++|++... .|.+.+..+..+ |.++ +++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 4444555555444568899999999999999995544 343332234456 8887 4577777655
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=7.7e-06 Score=86.73 Aligned_cols=129 Identities=11% Similarity=0.023 Sum_probs=87.1
Q ss_pred CCCCCChHHHHHHHHhCCC--cEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 491 DPPRHDSAETIRRALNLGV--NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI--~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+.... ..++.++..... ...+.-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~~-------------~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRTD-------------TLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSCS-------------SCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCCc-------------ccCCCc
Confidence 3678999999999999999 99999999999999999999985321 122222111000 001111
Q ss_pred CHHHHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCCceEEecCccHHH------hhccCEEecCCChhHHHHHH
Q 002832 569 FPEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIGIAVADATDAA------RSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g-~~Vam~GDG~NDapALk~AdVGIamg~gtd~a------k~aADivL~~~~~~~i~~~i 636 (875)
.|+-=..+.+.+.-.. +.+.|+||+.||..|.++|++|.+|+.+.+.. ...||+++ +++..+...+
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 2333334445554444 67899999999999999999999997433322 33788888 5577666544
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.86 E-value=9.6e-06 Score=82.92 Aligned_cols=124 Identities=8% Similarity=0.060 Sum_probs=86.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEecccC-----------------CCCCCHH
Confidence 57899999999999999999999999998888888888874211 1122221110 1112344
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec----CccHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA----DATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg----~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
--..+.+.+.-....+.|+||+.||..|.++|+++.++- +..+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 444555655544456889999999999999999998883 22233345689887 4577766554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.82 E-value=8.1e-05 Score=76.59 Aligned_cols=125 Identities=14% Similarity=0.169 Sum_probs=83.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFEG-----------------VKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCCC-----------------CCCCCHH
Confidence 46899999999999999999999999988888888888874311 1122211110 0111223
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEEe---cCccHHHhh---ccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARS---ASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVGIam---g~gtd~ak~---aADivL~~~~~~~i~~~i~ 637 (875)
-=..+.+.+.-..+.+.|+||+. ||..|.+.|+++... |.+.....+ .+|.++ +++..+...+.
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 22334444444445689999998 999999999987654 333333332 689887 55777776654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.80 E-value=1.9e-05 Score=77.62 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=80.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCH---------------HHHHHHHHHhC--CCCCCCCCcccccccccccCCccc
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLG--MGTNMYPSSALLGQNKDESIVALP 554 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lG--i~~~~~~~~~~~~~~~~~~~~~~~ 554 (875)
++.|++.+++++|++.|+++.++|+... ..+....+++| +..- .......+++..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~~~~------- 98 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI-FMCPHGPDDGCA------- 98 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE-EEECCCTTSCCS-------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EEcCCCCCCCCC-------
Confidence 5789999999999999999999999875 45566667777 3210 000000001000
Q ss_pred HHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc---eEEecCccHHHh----hccCEEecCC
Q 002832 555 VDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR----SASDIVLTEP 627 (875)
Q Consensus 555 ~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV---GIamg~gtd~ak----~aADivL~~~ 627 (875)
...-.|+-=..+.+.+.-..+.+.|+||+.||..+.++|++ +++.|.+..... ..+|+++ +
T Consensus 99 ----------~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 99 ----------CRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp ----------SSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred ----------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 00111222233444554445668999999999999999994 677775555444 4579888 5
Q ss_pred ChhHHHHHHH
Q 002832 628 GLSVIISAVL 637 (875)
Q Consensus 628 ~~~~i~~~i~ 637 (875)
++..+...+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5888777664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.79 E-value=4.2e-05 Score=79.69 Aligned_cols=127 Identities=16% Similarity=0.076 Sum_probs=86.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-ccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS-ALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... .. ++.+++.. ....-.|
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~i~~~~~~~----------------~~~Kp~~ 171 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA--GEHIYDPSWVG----------------GRGKPHP 171 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH--CSCEECGGGGT----------------TCCTTSS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc--cceEEeHhhcC----------------cCCCCCh
Confidence 46789999999999999999999999999999999998874210 11 12111110 0011112
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCc-------c-HHHhhccCEEecCCChhHHHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA-------T-DAARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~g-------t-d~ak~aADivL~~~~~~~i~~~i~~ 638 (875)
+--..+.+.+.-..+.+.++||+.||..|.++|+++ +.+..| . +..+..||+++ +++..+...++.
T Consensus 172 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 172 DLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 222334444443445699999999999999999998 445433 2 23344589998 668888888764
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00015 Score=71.72 Aligned_cols=134 Identities=12% Similarity=0.197 Sum_probs=80.6
Q ss_pred CccccCcccceeeeEEecc--CCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHH--hhcccEEEEecCCCCCceE
Q 002832 336 GTLTLNKLSVDKNLIEIFA--KGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEA--RANIQEVHFLPFNPTDKRT 411 (875)
Q Consensus 336 GTLT~~~m~v~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~l~~~pf~~~~k~~ 411 (875)
||||+|++.|.++. .+. .+.+.++++.+++.++. .+.||+.+|+++++++.... .......+..| .+.-.
T Consensus 1 GTLT~G~p~V~~v~--~~~~~~~~~~~~lL~laaa~E~-~SeHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~---G~Gv~ 74 (185)
T 2kmv_A 1 SFTMHGTPVVNQVK--VLTESNRISHHKILAIVGTAES-NSEHPLGTAITKYCKQELDTETLGTCIDFQVVP---GCGIS 74 (185)
T ss_dssp CCCCSCCCEEEEEE--ECSCTTTSCHHHHHHHHHHGGG-SSSCHHHHHHHHHHHHHHTCSCCCCCBCCEEET---TTEEE
T ss_pred CCCcCCcEEEEEEE--ecCCcCCCCHHHHHHHHHHHHc-cCCCHHHHHHHHHHHhhcCCCCCCCccceEEec---cceEE
Confidence 89999999998754 232 24567788888776654 45679999999875321000 00111122222 12111
Q ss_pred EEEEEcCC-----------------------------------------------CeEEEEEcCcHHHHHHhccCChHHH
Q 002832 412 ALTYIDSE-----------------------------------------------GKMHRVSKGAPEQILNLVRNKSEIE 444 (875)
Q Consensus 412 sv~~~~~~-----------------------------------------------g~~~~~~KGa~e~i~~~~~~~~~~~ 444 (875)
+ .+...+ .+.+.+..|+++.+.+..-.- .
T Consensus 75 ~-~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~i---~ 150 (185)
T 2kmv_A 75 C-KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVI---N 150 (185)
T ss_dssp E-EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCCC---C
T ss_pred E-EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCCC---C
Confidence 1 111100 011456679999986642211 1
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCC
Q 002832 445 RRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDP 492 (875)
Q Consensus 445 ~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~ 492 (875)
+.+.+.++++..+|..++.+|... .++|++++.|+
T Consensus 151 ~~~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 151 NDVNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 234455677888999999999865 79999999995
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.70 E-value=9.3e-06 Score=84.22 Aligned_cols=122 Identities=16% Similarity=0.119 Sum_probs=76.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHH-HHhCCCCCCCCCcccccc--cccccCCcccHHHHhhhCcEEEEe
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSSALLGQ--NKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
++.|++.+.++.|++.|+++.++|+.....+...- +..|+... -..++.++ +.. ...-
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~--f~~~~~~~~~~~~-----------------~~Kp 172 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL--FSHIVLGDDPEVQ-----------------HGKP 172 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT--SSCEECTTCTTCC-----------------SCTT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh--eeeEEecchhhcc-----------------CCCC
Confidence 57899999999999999999999999866544322 22233211 11122221 110 0001
Q ss_pred CHHHHHHHHHHHhhCC--CEEEEEcCCccCHHHHhhCC---ceEEecCccHHHhhccCEEecCCChhHHHH
Q 002832 569 FPEHKYEIVKRLQARK--HICGMTGDGVNDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g--~~Vam~GDG~NDapALk~Ad---VGIamg~gtd~ak~aADivL~~~~~~~i~~ 634 (875)
.|+-=..+.+.+.-.. +.+.|+||+.||..|.++|+ +++++|++.+..++.||+++ +++..+..
T Consensus 173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~--~sl~el~~ 241 (250)
T 3l5k_A 173 DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL--NSLQDFQP 241 (250)
T ss_dssp STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC--SCGGGCCG
T ss_pred ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee--cCHHHhhH
Confidence 1222222333332222 67899999999999999999 66666776667888999998 45665543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.70 E-value=5.9e-05 Score=76.98 Aligned_cols=123 Identities=12% Similarity=0.086 Sum_probs=83.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|+ .|+++.++|+.....+...-+.+|+.... ..++.+.+.. ...-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDLG-----------------VLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccCC-----------------CCCCCHH
Confidence 56899999999999 99999999999988888888888875321 1122111110 0111122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEEecCccH--HHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADATD--AARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVGIamg~gtd--~ak~aADivL~~~~~~~i~~~i 636 (875)
--..+.+.+.-....+.++||+. ||..|.++|+++++|.+... ..+..+|+++ +++..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 22333444433345689999995 99999999999999973322 4556799998 5577766543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=6.6e-05 Score=76.11 Aligned_cols=135 Identities=17% Similarity=0.153 Sum_probs=81.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCC---------------HHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~---------------~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (875)
++.|++.+++++|+++|+++.++|+.. ...+..+.+++|+.- ..........+. ...
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---~~~~~~~~~~~~-~~~---- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL---DGIYYCPHHPQG-SVE---- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC---SEEEEECCBTTC-SSG----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce---EEEEECCcCCCC-ccc----
Confidence 688999999999999999999999998 466777788888741 111111100000 000
Q ss_pred HHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce--EEe--cCc-cHHHhhccCEEecCCChhH
Q 002832 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAV--ADA-TDAARSASDIVLTEPGLSV 631 (875)
Q Consensus 557 ~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG--Iam--g~g-td~ak~aADivL~~~~~~~ 631 (875)
+.. .......-.|+--..+.+.+.-..+.+.|+||+.||..+.++|++. |.+ |.+ .+.....+|+++ +++..
T Consensus 122 ~~~-~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 122 EFR-QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp GGB-SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred ccC-ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 000 0000011123333344455544445688999999999999999964 344 322 233334589888 56888
Q ss_pred HHHHHH
Q 002832 632 IISAVL 637 (875)
Q Consensus 632 i~~~i~ 637 (875)
+.+.+.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877664
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.67 E-value=9.1e-05 Score=76.27 Aligned_cols=123 Identities=9% Similarity=0.044 Sum_probs=84.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++. +++.++|+........+.+.+|+.-+ .++.++.... ..-.|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~----~~~~~~~~~~-----------------~kp~~~ 173 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD----VIIGSDINRK-----------------YKPDPQ 173 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS----CCCCHHHHTC-----------------CTTSHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee----EEEEcCcCCC-----------------CCCCHH
Confidence 5689999999999996 99999999999999999999998411 1111111000 001122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccH---------H-HhhccCEEecCCChhHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD---------A-ARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd---------~-ak~aADivL~~~~~~~i~~~i~~ 638 (875)
-=..+.+.+.-..+.+.++||+.||..|.++|+++++|.+..+ . .+..+|+++ +++..+...+..
T Consensus 174 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 174 AYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 2222333333233568999999999999999999999974211 1 356789998 668888887754
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.65 E-value=6.4e-05 Score=77.72 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=84.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.- ..++.++... ...-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f----~~~~~~~~~~-----------------~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW----DMLLCADLFG-----------------HYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC----SEECCHHHHT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc----ceEEeecccc-----------------cCCCCHH
Confidence 4678999999999985 9999999999988888889998841 1111111100 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecC-----cc---HH--HhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD-----AT---DA--ARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~-----gt---d~--ak~aADivL~~~~~~~i~~~i~ 637 (875)
--..+.+.+.-..+.+.++||+.||..|.++|+++++|.+ |. +. .+..||+++ +++..+...+.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 3334445554444568999999999999999999999975 22 11 256789998 56888877664
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.65 E-value=7.7e-06 Score=82.25 Aligned_cols=120 Identities=8% Similarity=0.047 Sum_probs=79.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... -..++.+.+.. ...-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR--MAVTISADDTP-----------------KRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG--EEEEECGGGSS-----------------CCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh--ccEEEecCcCC-----------------CCCCCcH
Confidence 4689999999999999 99999999998888888888776321 01111111100 0001133
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecC----ccHHHhhccCEEecCCChhHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD----ATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~----gtd~ak~aADivL~~~~~~~i~~ 634 (875)
--..+.+.+.-....+.++||+.||.+|.+.|++++++.+ ..+..++ ||+++. ++..+..
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~ 206 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE 206 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence 3344455554444568999999999999999999999742 2344444 999883 4555543
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.65 E-value=6e-05 Score=78.36 Aligned_cols=123 Identities=13% Similarity=0.135 Sum_probs=85.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEccccC-----------------CCCCCHH
Confidence 67899999999999 9999999999999888998999874311 1122211110 0112244
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCc---------------------------cHHHhhccCEEe
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA---------------------------TDAARSASDIVL 624 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~g---------------------------td~ak~aADivL 624 (875)
--..+.+.+.-....+.|+||+.||..|.++|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 44455555544445688999999999999999999988644 122345689888
Q ss_pred cCCChhHHHHHHH
Q 002832 625 TEPGLSVIISAVL 637 (875)
Q Consensus 625 ~~~~~~~i~~~i~ 637 (875)
+++..+...+.
T Consensus 232 --~~~~el~~~l~ 242 (253)
T 1qq5_A 232 --PALGDLPRLVR 242 (253)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 56888877664
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.64 E-value=5.1e-05 Score=76.94 Aligned_cols=117 Identities=12% Similarity=0.012 Sum_probs=79.7
Q ss_pred CCCCChHHHHHHHHhCC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+.++.|++.| +++.++|+........+.+.+|+.... . .+++.-.|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f--~------------------------~~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF--D------------------------HIEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC--S------------------------EEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh--h------------------------eeeecCCC
Confidence 56899999999999999 999999999888888888888874210 0 12222223
Q ss_pred --HHHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEEe-------cCccHHHhhcc-CEEecCCChhHHHHHH
Q 002832 571 --EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV-------ADATDAARSAS-DIVLTEPGLSVIISAV 636 (875)
Q Consensus 571 --~~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVGIam-------g~gtd~ak~aA-DivL~~~~~~~i~~~i 636 (875)
+-=..+.+.+.-..+.+.++||+. ||..|.++|+++.++ |.+....+..+ |+++ +++..++..+
T Consensus 159 k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 159 TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 222233333333345689999996 999999999999887 22332223344 8887 5577776653
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.64 E-value=8.2e-05 Score=75.89 Aligned_cols=124 Identities=10% Similarity=0.075 Sum_probs=83.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++. +++.++|+.....+...-+.+|+.... ..++.+.+.. ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDTG-----------------FQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------SCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEecccC-----------------CCCCChH
Confidence 5789999999999999 999999999998888888888875321 1111111110 0011122
Q ss_pred HHHHHHHHHh-hCCCEEEEEcCCc-cCHHHHhhCCceE-EecCc--cHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQ-ARKHICGMTGDGV-NDAPALKKADIGI-AVADA--TDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq-~~g~~Vam~GDG~-NDapALk~AdVGI-amg~g--td~ak~aADivL~~~~~~~i~~~i~ 637 (875)
--..+.+.+. -..+.+.++||+. ||..|.+.|+++. .++.| .+..+..||+++ +++..+...+.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 2223333333 2235689999998 9999999999954 44443 555667899998 56888887764
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.64 E-value=2.9e-05 Score=80.43 Aligned_cols=66 Identities=12% Similarity=0.249 Sum_probs=53.8
Q ss_pred EeCHH--HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC--CceEEecCccHHHhhccCEEecC-CChhHHHHHHH
Q 002832 567 GVFPE--HKYEIVKRLQARKHICGMTGDGVNDAPALKKA--DIGIAVADATDAARSASDIVLTE-PGLSVIISAVL 637 (875)
Q Consensus 567 r~sP~--~K~~iV~~lq~~g~~Vam~GDG~NDapALk~A--dVGIamg~gtd~ak~aADivL~~-~~~~~i~~~i~ 637 (875)
.+.|. +|..-++.|.+.-. |+++||+.||.+||+.| +.|||||++ ++.||+++.+ ++-..+.++++
T Consensus 153 ei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 153 ELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 44443 79999999887633 89999999999999999 999999997 6789999876 55666666664
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.64 E-value=7.1e-05 Score=79.02 Aligned_cols=114 Identities=15% Similarity=0.020 Sum_probs=78.4
Q ss_pred CCCCChHHHHHHHHhC-CCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+.. ...++.+.+... ..-.|
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~---f~~i~~~~~~~~-----------------~kp~~ 173 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR---PEYFITANDVKQ-----------------GKPHP 173 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC---CSSEECGGGCSS-----------------CTTSS
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc---cCEEEEcccCCC-----------------CCCCh
Confidence 3579999999999999 99999999999988888888888752 122233222110 00123
Q ss_pred HHHHHHHHHHhh-------CCCEEEEEcCCccCHHHHhhCCceEEe---cCc-cHHHhhccCEEec
Q 002832 571 EHKYEIVKRLQA-------RKHICGMTGDGVNDAPALKKADIGIAV---ADA-TDAARSASDIVLT 625 (875)
Q Consensus 571 ~~K~~iV~~lq~-------~g~~Vam~GDG~NDapALk~AdVGIam---g~g-td~ak~aADivL~ 625 (875)
+--..+.+.+.- ....+.++||+.||..|+++|++++++ +.+ .+..+..||+++.
T Consensus 174 ~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~ 239 (275)
T 2qlt_A 174 EPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVK 239 (275)
T ss_dssp HHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEES
T ss_pred HHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 333445555544 445689999999999999999977666 433 3333345898874
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.63 E-value=5.6e-05 Score=75.42 Aligned_cols=121 Identities=10% Similarity=0.106 Sum_probs=82.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+.... ..++.+.+.. ...-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESVK-----------------EYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhcC-----------------CCCCCHH
Confidence 56789999 9999999 999999999988888888899874321 1122221110 0111244
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe-c---CccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam-g---~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
--..+.+.+. ...+.|+||+.||..|.++|+++..+ . ++.+..+..+|.++ +++..+...+.
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 198 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHHH
Confidence 4455556665 45688999999999999999999777 2 22222344688887 45777766553
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.63 E-value=3.5e-05 Score=81.37 Aligned_cols=67 Identities=22% Similarity=0.251 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
..|...++.+.+. | ..++++||+.||.+|++.|++|++|+++.+..|+.||++..+.+-.++.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 4688777776654 3 45899999999999999999999999999999999999998777778887775
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.60 E-value=4.5e-05 Score=81.94 Aligned_cols=67 Identities=27% Similarity=0.299 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEec-CCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT-EPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~-~~~~~~i~~~i~ 637 (875)
..|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++. +++-.++.++++
T Consensus 223 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 223 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 3788888877653 3 35899999999999999999999999999999999999998 888888888775
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0001 Score=74.66 Aligned_cols=125 Identities=8% Similarity=0.058 Sum_probs=80.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.++. ++.++|+........+.+++|+.... ...++.++.... .. ..-.|+
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~~-------------~~--~kpk~~ 147 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLGA-------------DR--VKPKPD 147 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHCT-------------TC--CTTSSH
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc-cceEEecccccc-------------CC--CCcCHH
Confidence 457889998888874 99999999998888888888874211 011111111000 00 001122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCccH-------HHhhc-cCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATD-------AARSA-SDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~gtd-------~ak~a-ADivL~~~~~~~i~~~i~ 637 (875)
--..+.+.+.-....+.++||+.||.+|+++|+++ ++++++.+ ..++. ||+++ +++..+...++
T Consensus 148 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 220 (229)
T 2fdr_A 148 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 220 (229)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHHH
Confidence 23344455544445688999999999999999998 77775543 35556 99988 45777766553
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0001 Score=75.87 Aligned_cols=123 Identities=14% Similarity=0.145 Sum_probs=80.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.....+..+-+++|+. . -..++.+.+... ..-.|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~--f~~~~~~~~~~~-----------------~Kp~p~ 169 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S--FDFALGEKSGIR-----------------RKPAPD 169 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T--CSEEEEECTTSC-----------------CTTSSH
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c--eeEEEecCCCCC-----------------CCCCHH
Confidence 35789999999999999999999999888888888888874 2 112222221110 001122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce---EEecCcc--HHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG---IAVADAT--DAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG---Iamg~gt--d~ak~aADivL~~~~~~~i~~~i 636 (875)
-=..+.+.+.-..+.+.|+||+.||..|.++|++. +++|.+. +..+..||.++ +++..+...+
T Consensus 170 ~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 170 MTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 11233344433345689999999999999999984 4445333 23334688887 4577766544
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.57 E-value=7.8e-05 Score=73.36 Aligned_cols=108 Identities=12% Similarity=0.025 Sum_probs=70.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
.+.|++.+.++.|++.|+++.++|++.. .+....+.+|+.... ...+.+.+.. ...-.|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~~-----------------~~kp~~~ 141 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSGF-----------------KRKPNPE 141 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGCC-----------------CCTTSCH
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeeccccC-----------------CCCCCHH
Confidence 3689999999999999999999998864 456667777774210 1111111100 0001123
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccC
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aAD 621 (875)
--..+.+.+.-. .+.++||+.||.+|++.|++++++.+.....++..+
T Consensus 142 ~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 223344444333 688999999999999999999888755555555544
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.56 E-value=4.9e-05 Score=81.01 Aligned_cols=66 Identities=24% Similarity=0.318 Sum_probs=56.6
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
+|..-++.+.+. | ..++++||+.||.+|++.|++|++|+++.+..++.||+++.+.+-.++.++++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 587777776653 2 35899999999999999999999999999999999999998877788888775
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00016 Score=71.64 Aligned_cols=93 Identities=11% Similarity=0.016 Sum_probs=64.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCC-HHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+++++|++.|+++.++||.. ...+..+.+.+|+..... ... ++..-.|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~--~~~----------------------~~~~~k~ 123 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV--HRE----------------------IYPGSKI 123 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE--EEE----------------------ESSSCHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc--eeE----------------------EEeCchH
Confidence 678999999999999999999999998 788999999999853100 000 0000012
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa 608 (875)
+.-..+.+.+.-....+.|+||+.||..+.++|++...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 124 THFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 22223333333333568899999999999999987543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.49 E-value=9.2e-05 Score=75.43 Aligned_cols=122 Identities=13% Similarity=0.081 Sum_probs=81.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++ |+++.++|+..........+.++-. -..++.+.+.. ...-.|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~----fd~i~~~~~~~-----------------~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE----FDHIITAQDVG-----------------SYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC----CSEEEEHHHHT-----------------SCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc----cCEEEEccccC-----------------CCCCCHH
Confidence 678999999999999 8999999999887776665543311 11111111110 1122344
Q ss_pred HHHHHHHHHhhC---CCEEEEEcCCc-cCHHHHhhCCceEEecCcc-----------HHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQAR---KHICGMTGDGV-NDAPALKKADIGIAVADAT-----------DAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~---g~~Vam~GDG~-NDapALk~AdVGIamg~gt-----------d~ak~aADivL~~~~~~~i~~~i 636 (875)
-....++.+++. .+.+.|+||+. ||..|.++|+++++|.+.. +..+..||+++ +++..+...+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 444553334433 45689999996 9999999999999995321 33447899998 5688887776
Q ss_pred H
Q 002832 637 L 637 (875)
Q Consensus 637 ~ 637 (875)
+
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.48 E-value=6.1e-05 Score=79.39 Aligned_cols=66 Identities=26% Similarity=0.264 Sum_probs=56.8
Q ss_pred HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.|...++.+.+. ...+.++||+.||.+|++.|++|++|+++.+..++.||+++.+.+-..+.++++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 688877777653 245899999999999999999999999999989999999998888888888775
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00025 Score=70.39 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=91.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCH---HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~---~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
-++.|++.+++++|+++|+++.++|+-.. ..+..+-+.+|+.... ..++...+... ......
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCC
Confidence 36899999999999999999999998765 7888888999985311 11111111000 000112
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCceEEe-cCccHH-----H-hhccCEEecCCChhHHHHHHHHH
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV-ADATDA-----A-RSASDIVLTEPGLSVIISAVLTS 639 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG-~NDapALk~AdVGIam-g~gtd~-----a-k~aADivL~~~~~~~i~~~i~~g 639 (875)
-.|+--..+.+.+.-....+.|+||. .+|..+-++|++.... ..+... . ...+|.++.+.++..+..+++..
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 23444455556665555678999999 7999999999986544 332211 1 12678999766899999998876
Q ss_pred HHH
Q 002832 640 RAI 642 (875)
Q Consensus 640 R~~ 642 (875)
+.-
T Consensus 178 ~~~ 180 (189)
T 3ib6_A 178 KKI 180 (189)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=6.7e-05 Score=77.93 Aligned_cols=66 Identities=18% Similarity=0.156 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhc-------cCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSA-------SDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~a-------ADivL~~~~~~~i~~~i~ 637 (875)
.|..-++.+.+. | ..|.++||+.||.+|++.|++|++||++.+..|+. ||++..+++-.++.++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 577777766653 2 35899999999999999999999999999988885 789988777777877775
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00014 Score=73.24 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=77.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++ |+++.++|+.....+..+-+++|+.... ..++. +.-.+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~-----------------------~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGIYG-----------------------SSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEE-----------------------ECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eeeec-----------------------CCCCCC
Confidence 467999999999999 9999999999888888888888885311 11111 110011
Q ss_pred HHHHHH-HHHhhCC---CEEEEEcCCccCHHHHhhCCc---eEEecCc-cHHHh-hccCEEecCCChhHHHH
Q 002832 572 HKYEIV-KRLQARK---HICGMTGDGVNDAPALKKADI---GIAVADA-TDAAR-SASDIVLTEPGLSVIIS 634 (875)
Q Consensus 572 ~K~~iV-~~lq~~g---~~Vam~GDG~NDapALk~AdV---GIamg~g-td~ak-~aADivL~~~~~~~i~~ 634 (875)
-|-++. +.+++.| +.+.|+||+.||..|.++|++ |+++|.+ .+..+ ..+|+++. ++..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 233333 3333333 458999999999999999998 7777754 33333 36898884 4666554
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.38 E-value=8.6e-05 Score=77.80 Aligned_cols=124 Identities=14% Similarity=0.178 Sum_probs=84.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+.... ...+-+.+|+.... ..++.+.+.. ...-.|+
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 165 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSEAAG-----------------WPKPDPR 165 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHHHHS-----------------SCTTSHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeecccC-----------------CCCCCHH
Confidence 36799999999999999999999987664 57777888874211 1111111100 1122344
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEEecCccHH------HhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADATDA------ARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVGIamg~gtd~------ak~aADivL~~~~~~~i~~~i~ 637 (875)
--..+.+.+.-....+.|+||+. ||..|.++|+++.++.+.... ....+|+++ +++..+...+.
T Consensus 166 ~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 166 IFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 44555566654556789999997 999999999999999632211 223688888 56888887765
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00056 Score=70.68 Aligned_cols=117 Identities=14% Similarity=0.042 Sum_probs=81.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeC--
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF-- 569 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s-- 569 (875)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+.... . .+++.-.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f--~------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF--P------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC--C------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC--c------------------------eeeeeCCCC
Confidence 56899999999999 99999999999988888888888874211 0 1222222
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEEec-CccH--------HHhhccCE-EecCCChhHHHHHHH
Q 002832 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVA-DATD--------AARSASDI-VLTEPGLSVIISAVL 637 (875)
Q Consensus 570 P~~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVGIamg-~gtd--------~ak~aADi-vL~~~~~~~i~~~i~ 637 (875)
|+--..+.+.+.-..+.+.++||+. ||..|.+.|++++++- .|.. .....+|. ++ +++..+...++
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 3433445555554456789999999 9999999999998763 3321 11345787 66 55888777664
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0002 Score=74.87 Aligned_cols=67 Identities=25% Similarity=0.293 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
..|...++.+.++ ...+.++||+.||.+|++.|++|++|+++.+..++.||+++.+.+-.++..+++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 3566666655432 346889999999999999999999999998888999999987655555877765
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00043 Score=68.70 Aligned_cols=99 Identities=12% Similarity=0.079 Sum_probs=70.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.... ..++.+.+.. ...-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~~-----------------~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSALG-----------------VMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHHHS-----------------CCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeecccC-----------------CCCCCHH
Confidence 46799999999999999 99999999999888888888874321 1111111100 1112244
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg 610 (875)
--..+.+.+.-..+.+.|+||+.||..|.++|++...+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 444455555544456899999999999999999988775
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0002 Score=74.57 Aligned_cols=55 Identities=24% Similarity=0.189 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhC-----CCEEEEEcCCccCHHHHhhCCceEEecCcc-HHHhhccCEEec
Q 002832 571 EHKYEIVKRLQAR-----KHICGMTGDGVNDAPALKKADIGIAVADAT-DAARSASDIVLT 625 (875)
Q Consensus 571 ~~K~~iV~~lq~~-----g~~Vam~GDG~NDapALk~AdVGIamg~gt-d~ak~aADivL~ 625 (875)
.+|..-++.+.+. ...|+++||+.||.+||+.|++|++||++. +..++.||+++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEec
Confidence 3577777766543 357999999999999999999999999988 667778887764
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00013 Score=73.13 Aligned_cols=101 Identities=5% Similarity=-0.026 Sum_probs=67.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH------hCCCCCCCCCcccccccccccCCcccHHHHhhhCcEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR------LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~------lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf 565 (875)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+.... ..++.+.+.. .
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~~~~~-----------------~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYASCQMG-----------------K 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEHHHHT-----------------C
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEeecccC-----------------C
Confidence 467899999999999 999999999888777766655 4542110 0111110000 0
Q ss_pred EEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCc
Q 002832 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA 612 (875)
Q Consensus 566 ar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~g 612 (875)
..-.|+--..+.+.+.-..+.+.++||+.||..|.++|+++..+.++
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 11123333445555544455689999999999999999999998754
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0022 Score=64.36 Aligned_cols=124 Identities=16% Similarity=0.128 Sum_probs=79.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+.+...+...-+.+|+.... ..++.+++.. ...-.|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f--d~~~~~~~~~-----------------~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF--DVMVFGDQVK-----------------NGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECGGGSS-----------------SCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc--cccccccccC-----------------CCcccHH
Confidence 45789999999999999999999999999999999999985321 1122221111 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE----Eec-CccHHHhhc-cCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI----AVA-DATDAARSA-SDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGI----amg-~gtd~ak~a-ADivL~~~~~~~i~~~i~ 637 (875)
-=....+.+.-..+.+.|+||..+|..+-++|++.- .-| +..+.-+++ ++.+. + ...+++.++
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l~ 213 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVLK 213 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHHH
Confidence 333444555444456899999999999999999742 223 233333444 44443 3 344555443
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0015 Score=68.14 Aligned_cols=123 Identities=11% Similarity=0.130 Sum_probs=82.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+.... ..++.+.+.. ..+-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCCC-----------------CCCCCHH
Confidence 578999999999997 6999999999998888888999985321 1222222111 0111244
Q ss_pred HHHHHHHHHhhCCCEEEEEcC-CccCHHHHhhCCc--eEEecCccH---HHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGD-GVNDAPALKKADI--GIAVADATD---AARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GD-G~NDapALk~AdV--GIamg~gtd---~ak~aADivL~~~~~~~i~~~i 636 (875)
--..+.+.+.-....+.|+|| ..||..+-++|++ .|.+..+.. .....+|+++ +++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 444445555444456899999 4999999999999 677763321 1234588887 4577776655
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00055 Score=69.50 Aligned_cols=107 Identities=21% Similarity=0.087 Sum_probs=63.5
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCcccccccccccCCcccH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPV 555 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~ 555 (875)
.++.|++.+++++|++.|+++.++|+... ..+....+++|+.-+. ........+..+. +.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~---~~~~~~~~~g~~~--~~ 129 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM---VLACAYHEAGVGP--LA 129 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCCTTCCST--TC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceee---EEEeecCCCCcee--ec
Confidence 56889999999999999999999999887 6777788888873110 0000000000000 00
Q ss_pred HHHhhhCcE-EEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 002832 556 DELIEKADG-FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (875)
Q Consensus 556 ~~~~~~~~v-far~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGI 607 (875)
. ..+ ...-.|+-=..+.+.+.-..+.+.|+||+.||..+.++|++..
T Consensus 130 ~-----~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 130 I-----PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp C-----SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred c-----cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 0 000 0000111112233333333346889999999999999999764
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0032 Score=62.77 Aligned_cols=120 Identities=10% Similarity=0.033 Sum_probs=74.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|+++|+++.++||.....+..+.. . ....++.+++.. ..+-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC-----------------CCCCChH
Confidence 578999999999999999999999998877754443 1 111222222111 0111233
Q ss_pred HHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCc-eEEecCccH---------------------------HHhhccCE
Q 002832 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI-GIAVADATD---------------------------AARSASDI 622 (875)
Q Consensus 572 ~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdV-GIamg~gtd---------------------------~ak~aADi 622 (875)
-=....+.+.-. .+.+.|+||..+|..+-++|++ .|++..|.. .....+|+
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~ 171 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHS 171 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCE
Confidence 222333333322 2458899999999999999997 455543211 11235888
Q ss_pred EecCCChhHHHHHHH
Q 002832 623 VLTEPGLSVIISAVL 637 (875)
Q Consensus 623 vL~~~~~~~i~~~i~ 637 (875)
++ +++..+...+.
T Consensus 172 vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 172 VI--DHLGELESCLA 184 (196)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred Ee--CCHHHHHHHHH
Confidence 88 56888877663
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0016 Score=65.86 Aligned_cols=118 Identities=19% Similarity=0.164 Sum_probs=74.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++. +++.++|+.... -+.+|+... -..++.+.+.. ...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY--FAFALCAEDLG-----------------IGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG--CSEEEEHHHHT-----------------CCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH--eeeeEEccccC-----------------CCCcCHH
Confidence 4679999999999998 999999987643 233444211 00111100000 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEEec----CccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVA----DATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVGIamg----~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
--..+.+.+.-....+.|+||+. ||..|.++|+++.++- ...+. +..+|+++ +++..+...++
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 33444555544445689999998 9999999999998872 22222 56789988 56888887664
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.00067 Score=62.66 Aligned_cols=96 Identities=11% Similarity=0.093 Sum_probs=63.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+++++|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ..+-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSGELG-----------------VEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHHHHS-----------------CCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEeccCC-----------------CCCCCHH
Confidence 46788999999999999999999999887777777788774311 1111111000 0111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG 606 (875)
--..+.+.+.-..+.+.|+||+.+|..+.++|++-
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 33334444443344688999999999999999874
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.019 Score=55.41 Aligned_cols=131 Identities=11% Similarity=0.099 Sum_probs=77.1
Q ss_pred cccCcccceeeeEEeccC--CCChHHHHHHHHHhccccccChHHHHHHHhcCChHHH--hhcccEEEEecCCCCCceEEE
Q 002832 338 LTLNKLSVDKNLIEIFAK--GVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEA--RANIQEVHFLPFNPTDKRTAL 413 (875)
Q Consensus 338 LT~~~m~v~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~l~~~pf~~~~k~~sv 413 (875)
||+|++.|.++. .... +.+.++++.+++..+. .+.||+.+|+++++...... .......+.+| .+.-.+.
T Consensus 1 LT~G~p~V~~v~--~~~~~~~~~~~~lL~laaslE~-~SeHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~---G~Gv~a~ 74 (165)
T 2arf_A 1 AGHMVPRVMRVL--LLGDVATLPLRKVLAVVGTAEA-SSEHPLGVAVTKYCKEELGTETLGYCTDFQAVP---GCGIGCK 74 (165)
T ss_dssp CCCCCCCEEEEE--ECCCTTTSCHHHHHHHHHHHHT-TSCSTTHHHHHHHHHHHHTCCCCCCEEEEEEET---TTEEEEE
T ss_pred CCCceeEEEEEE--eeCCcCCCCHHHHHHHHHHHHc-cCCChHHHHHHHHHHHhcCCCCCCCcCceEEec---CccEEEE
Confidence 899999998754 2221 2467778888776654 45679999999875321000 01112222332 2222222
Q ss_pred EEEcC------------------------------CCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEE
Q 002832 414 TYIDS------------------------------EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLA 463 (875)
Q Consensus 414 ~~~~~------------------------------~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~ 463 (875)
+... ..+.+.+.-|+++.+.+..-.. ...+.+.+..+..+|..++.
T Consensus 75 -v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~~---~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 75 -VSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTI---SSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp -EECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCSS---CHHHHHHHHHHHTTTSEEEE
T ss_pred -EcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCCC---CHHHHHHHHHHHhCCCeEEE
Confidence 2211 0112345569999886532111 12344456677889999999
Q ss_pred EEEEecCCCCcCCCCCCeeEEEEeccCC
Q 002832 464 VAYQEVPDGRKESSGGPWQFIGLMPLFD 491 (875)
Q Consensus 464 ~A~~~~~~~~~~~~e~~l~~lG~i~~~D 491 (875)
+|... .++|++++.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99865 7999999987
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0036 Score=69.11 Aligned_cols=138 Identities=13% Similarity=0.098 Sum_probs=81.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|+++|+++.++|+.....+..+-+.+|+........++.+++... -.+......-...-.|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~------~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------AENMYPQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------HHHHSTTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccc------cccccccccCCCCCCHH
Confidence 678899999999999999999999999988888888999853211002232221100 00000000000011122
Q ss_pred HHHHHHHHHh--------------hCCCEEEEEcCCccCHHHHhhCCce-EEecCcc-------HHHhhccCEEecCCCh
Q 002832 572 HKYEIVKRLQ--------------ARKHICGMTGDGVNDAPALKKADIG-IAVADAT-------DAARSASDIVLTEPGL 629 (875)
Q Consensus 572 ~K~~iV~~lq--------------~~g~~Vam~GDG~NDapALk~AdVG-Iamg~gt-------d~ak~aADivL~~~~~ 629 (875)
-=....+.+. -....+.|+||+.+|..|-++|++. |++..|. +.....||+++ +++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~sl 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHL 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CCH
Confidence 1111222211 1235689999999999999999975 3444331 22233689988 558
Q ss_pred hHHHHHHH
Q 002832 630 SVIISAVL 637 (875)
Q Consensus 630 ~~i~~~i~ 637 (875)
..+...++
T Consensus 367 ~eL~~~l~ 374 (384)
T 1qyi_A 367 GELRGVLD 374 (384)
T ss_dssp GGHHHHHS
T ss_pred HHHHHHHH
Confidence 88777664
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.00013 Score=72.67 Aligned_cols=101 Identities=8% Similarity=0.026 Sum_probs=61.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH-hCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++.|++.+.++.|++.|+++.++|+........+.+. .|+... -..++.+.+. ....-.|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~-----------------~~~Kp~~ 151 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQDL-----------------GMRKPEA 151 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEEHHHH-----------------TCCTTCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh--eeeEEEeccc-----------------CCCCCCH
Confidence 4679999999999999999999998654332211111 121100 0000000000 0011123
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecC
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~ 611 (875)
+--..+.+.+.-....+.|+||+.||..|.++|++...+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 192 (206)
T 2b0c_A 152 RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 192 (206)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEec
Confidence 34445555555455678999999999999999999888763
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0012 Score=69.07 Aligned_cols=57 Identities=21% Similarity=0.277 Sum_probs=47.5
Q ss_pred HHHHHHHHHH-hhCCCEEEEEcC----CccCHHHHhhCC-ceEEecCccHHHhhccCEEecCC
Q 002832 571 EHKYEIVKRL-QARKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVLTEP 627 (875)
Q Consensus 571 ~~K~~iV~~l-q~~g~~Vam~GD----G~NDapALk~Ad-VGIamg~gtd~ak~aADivL~~~ 627 (875)
-+|..-++.| .-...-|+++|| |.||.+||+.|+ +|++|+++.+..|+.||+|..+.
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPET 258 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCC
Confidence 3588888877 112357999999 999999999999 69999999999999999987544
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0012 Score=67.11 Aligned_cols=103 Identities=9% Similarity=-0.032 Sum_probs=68.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH------hCCCCCCCCCcccccccccccCCcccHHHHhhhCcEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR------LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~------lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf 565 (875)
++.|++.+.++.|++. +++.++|+.....+..+.+. .|+... -..++.+.+. -.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~--fd~i~~~~~~-----------------~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY--FEKTYLSYEM-----------------KM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH--CSEEEEHHHH-----------------TC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh--CCEEEeeccc-----------------CC
Confidence 4679999999999998 99999999998887766643 333110 0001110000 01
Q ss_pred EEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccH
Q 002832 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD 614 (875)
Q Consensus 566 ar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd 614 (875)
..-.|+-=..+.+.+.-....+.|+||+.||..|.++|+++..+.++.+
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 1223344445556665455678999999999999999999998875443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0045 Score=64.55 Aligned_cols=43 Identities=19% Similarity=0.308 Sum_probs=35.0
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcC---CCHHHHHHHHHHhCCC
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 532 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 532 (875)
.+.+-|+++++|++++++|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 455567899999999999999999999 5666666666778874
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.004 Score=64.55 Aligned_cols=84 Identities=15% Similarity=0.057 Sum_probs=63.3
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCH----HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEE
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa 566 (875)
.++.|++.+.++.|++.|+++.++||-.. ..+..-.+++||..-... .++-
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~-------------------------~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK-------------------------TLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT-------------------------TEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc-------------------------eeEe
Confidence 57789999999999999999999998854 466677778899631000 1233
Q ss_pred EeCHHHHHHHHHHHhhCC-CEEEEEcCCccCHHH
Q 002832 567 GVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPA 599 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g-~~Vam~GDG~NDapA 599 (875)
|-...+|....+.+++.| .+|+++||-.+|.++
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 333356888888888754 478999999999886
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0072 Score=62.43 Aligned_cols=117 Identities=11% Similarity=0.099 Sum_probs=76.7
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.+.++.|++.|+++.+.|+-. .+..+-+.+|+... -..++.+++.. ...-.|
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~--Fd~i~~~~~~~-----------------~~KP~p 173 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDK--FDFIADAGKCK-----------------NNKPHP 173 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGG--CSEECCGGGCC-----------------SCTTSS
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccc--cceeecccccC-----------------CCCCcH
Confidence 3578999999999999999998877654 34566778888532 12222222211 011124
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecCccHHHhhccCEEecCCChhHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~gtd~ak~aADivL~~~~~~~i 632 (875)
+-=....+.+.-..+.+.|+||..+|..|-++|++ .|++++..+. +.||+++ +++..+
T Consensus 174 ~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi--~~l~eL 232 (250)
T 4gib_A 174 EIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVV--DSTNQL 232 (250)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEE--SSGGGC
T ss_pred HHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEE--CChHhC
Confidence 44444555555455568999999999999999997 5566544433 3589988 456655
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0017 Score=67.08 Aligned_cols=52 Identities=19% Similarity=0.243 Sum_probs=41.9
Q ss_pred HHHHHHHHH-hhCCCEEEEEcC----CccCHHHHhhCCc-eEEecCccHHHhhccCEE
Q 002832 572 HKYEIVKRL-QARKHICGMTGD----GVNDAPALKKADI-GIAVADATDAARSASDIV 623 (875)
Q Consensus 572 ~K~~iV~~l-q~~g~~Vam~GD----G~NDapALk~AdV-GIamg~gtd~ak~aADiv 623 (875)
+|..-++.| .-...-|+++|| |.||.+||+.|+. |++|+++.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 577766666 112457999999 9999999999987 999999999999999976
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0067 Score=61.17 Aligned_cols=95 Identities=11% Similarity=0.032 Sum_probs=60.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+.... +..+.+.+|+.... ..++.+.+.. ...-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLKKYF--DALALSYEIK-----------------AVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcHhHe--eEEEeccccC-----------------CCCCCHH
Confidence 46799999999999999999999988664 67788888874211 1111111100 1111122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCcc-CHHHHhhCCceEEe
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVN-DAPALKKADIGIAV 609 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~N-DapALk~AdVGIam 609 (875)
--..+.+.+.-. . .|+||+.+ |..+-++|++....
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 222333333322 3 89999999 99999999987554
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.70 E-value=0.023 Score=59.10 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=34.1
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcC---CCHHHHHHHHHHhCCC
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 532 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 532 (875)
+.+-|+++++|++++++|++++++|| ..........+++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33446899999999999999999988 6666666777788874
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0073 Score=62.66 Aligned_cols=84 Identities=14% Similarity=0.042 Sum_probs=61.8
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCH----HHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEE
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfa 566 (875)
+++.|++.+.++.|++.|+++.++||-.. ..+..--+++||..-.. . .++-
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~-~------------------------~Lil 154 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE-S------------------------AFYL 154 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG-G------------------------GEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc-c------------------------ceec
Confidence 57889999999999999999999998754 46666677889863100 0 1233
Q ss_pred EeCHHHHHHHHHHHhhCC-CEEEEEcCCccCHHH
Q 002832 567 GVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPA 599 (875)
Q Consensus 567 r~sP~~K~~iV~~lq~~g-~~Vam~GDG~NDapA 599 (875)
|-.-..|....+.+.+.| .+|+++||-.+|.++
T Consensus 155 r~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 155 KKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 322345777777787774 478999999999875
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.014 Score=59.29 Aligned_cols=114 Identities=11% Similarity=0.101 Sum_probs=71.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.| ++.++|+-....+..+.+.+|+... +.+ .+... .
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~------f~~-------------------~~~~~---~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE------VEG-------------------RVLIY---I 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH------TTT-------------------CEEEE---S
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh------cCe-------------------eEEec---C
Confidence 68999999999999999 9999999888888888888887321 000 01111 1
Q ss_pred HHHHHHHHHhh--CCCEEEEEcCCcc---CHHHHhhCCce-EEecCc----c-HHHhhc--cCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQA--RKHICGMTGDGVN---DAPALKKADIG-IAVADA----T-DAARSA--SDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~--~g~~Vam~GDG~N---DapALk~AdVG-Iamg~g----t-d~ak~a--ADivL~~~~~~~i~~~i 636 (875)
.|....+.+.+ ....+.|+||+.| |..+-++|++- |.+..| . +..++. +|.++ +++..+...+
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~l 222 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEMD 222 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGCG
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHHH
Confidence 22223333322 3467999999999 55555667653 333333 2 223333 89888 4466655443
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.74 E-value=0.011 Score=57.70 Aligned_cols=100 Identities=12% Similarity=0.065 Sum_probs=61.9
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCccc-cc----ccccc-c
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSAL-LG----QNKDE-S 549 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~~-~~----~~~~~-~ 549 (875)
-++.|++.+++++|++.|+++.++|+- ....+..+.+.+|+.- ..++ .+ .+... .
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f----d~v~~s~~~~~~~~~~~K 116 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF----DEVLICPHLPADECDCRK 116 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE----EEEEEECCCGGGCCSSST
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe----eEEEEcCCCCcccccccC
Confidence 357899999999999999999999997 4567777888888741 1111 11 11000 0
Q ss_pred CCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCc
Q 002832 550 IVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA 612 (875)
Q Consensus 550 ~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~g 612 (875)
.+..-+.. +.+.+.-....+.|+||..+|..+-++|++- |.+..+
T Consensus 117 P~p~~~~~------------------~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 117 PKVKLVER------------------YLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp TSCGGGGG------------------GC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred CCHHHHHH------------------HHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 00001111 1112222233578999999999999999985 444444
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.69 E-value=0.22 Score=51.09 Aligned_cols=40 Identities=23% Similarity=0.209 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 002832 493 PRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (875)
+-++..++++.+++.|+++..+| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 88888777777787774
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.43 E-value=0.022 Score=60.61 Aligned_cols=97 Identities=12% Similarity=0.008 Sum_probs=67.3
Q ss_pred ccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHH---HHHHHH--------hCCCCCCCCCcccccccccccCCcccHH
Q 002832 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA---KETGRR--------LGMGTNMYPSSALLGQNKDESIVALPVD 556 (875)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA---~~ia~~--------lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (875)
..++++.|++.++++.|++.|+++.++||-....+ ...-+. .|+.. ..++.+.+.+
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~--------- 250 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL----VMQCQREQGD--------- 250 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC----SEEEECCTTC---------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc----hheeeccCCC---------
Confidence 34678999999999999999999999999874322 222333 67721 1222111110
Q ss_pred HHhhhCcEEEEeCHHHHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCCce
Q 002832 557 ELIEKADGFAGVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 557 ~~~~~~~vfar~sP~~K~~iV~~lq~~g-~~Vam~GDG~NDapALk~AdVG 606 (875)
.+-.|+-|..+.+.+.... ..+.|+||..+|+.|-++|++-
T Consensus 251 ---------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 251 ---------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp ---------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ---------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 1223778888888885544 3468999999999999999875
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=94.43 E-value=0.078 Score=55.02 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=36.5
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (875)
+++-+++.++|++|++.|++++++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88887777777888874
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.95 E-value=0.036 Score=59.66 Aligned_cols=116 Identities=11% Similarity=0.040 Sum_probs=72.1
Q ss_pred cCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh----CCCCCCCCCccccccccccc--C--CcccHH-H--
Q 002832 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL----GMGTNMYPSSALLGQNKDES--I--VALPVD-E-- 557 (875)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l----Gi~~~~~~~~~~~~~~~~~~--~--~~~~~~-~-- 557 (875)
....+.|++.+.++.|+++|++|+++||-....++.+|..+ ||+.+ .+.|...... . ...... +
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e-----~ViG~~~~~~~~~~~~~~~~~~~~~ 214 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE-----NVIGVTTLLKNRKTGELTTARKQIA 214 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG-----GEEEECEEEECTTTCCEECHHHHHH
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH-----HeEeeeeeeeccccccccccccccc
Confidence 34457899999999999999999999999999999999885 55432 1222111000 0 000000 0
Q ss_pred -------HhhhCcEEEE-----eCHHHHHHHHHHHhhCC-CEEEEEcCCc-cCHHHHhh--CCceEEe
Q 002832 558 -------LIEKADGFAG-----VFPEHKYEIVKRLQARK-HICGMTGDGV-NDAPALKK--ADIGIAV 609 (875)
Q Consensus 558 -------~~~~~~vfar-----~sP~~K~~iV~~lq~~g-~~Vam~GDG~-NDapALk~--AdVGIam 609 (875)
...+..+-.+ +--+.|..-|+...+.| ..+++.||+. .|.+||.. ++.|+++
T Consensus 215 dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 215 EGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp TTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0001111122 12367888887766444 4689999994 79999965 5555554
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.77 E-value=0.038 Score=57.44 Aligned_cols=42 Identities=17% Similarity=0.228 Sum_probs=34.2
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCC---HHHHHHHHHHhCCC
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMG 532 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~ 532 (875)
.++.|++.++++.|++.|+++.++||-. .......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 3678999999999999999999999987 44444555677885
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=93.25 E-value=0.053 Score=56.36 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=71.0
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh---CCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL---GMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l---Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
-++.|++.++++.|+++|+++.++|+-+...+..+-+.+ |+... -..++.+ + +-..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~--fd~i~~~-~------------------~~~K 187 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL--VDGHFDT-K------------------IGHK 187 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG--CSEEECG-G------------------GCCT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh--ccEEEec-C------------------CCCC
Confidence 368999999999999999999999999887777665543 34321 0111111 1 0011
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEec-Ccc---HHHhhccCEEe
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA-DAT---DAARSASDIVL 624 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg-~gt---d~ak~aADivL 624 (875)
-.|+-=..+.+.+.-..+.+.|+||..+|..+-++|++- |.+. .+. +.....+|.++
T Consensus 188 P~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i 249 (261)
T 1yns_A 188 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249 (261)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred CCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEE
Confidence 123333444555554456789999999999999999974 3343 221 11223467776
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=93.15 E-value=0.014 Score=60.22 Aligned_cols=52 Identities=21% Similarity=0.173 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhhCCCEEEEEcC----CccCHHHHhhCC-ceEEecCccHHHhhccCE
Q 002832 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDI 622 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GD----G~NDapALk~Ad-VGIamg~gtd~ak~aADi 622 (875)
-+|..-++.|.+...-|+++|| |.||.+||+.|+ +|++|+++.|..|..+++
T Consensus 186 v~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~ 242 (246)
T 3f9r_A 186 WDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKI 242 (246)
T ss_dssp CSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHH
Confidence 3688777777765668999999 799999999996 899999999888865543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.49 E-value=0.088 Score=53.17 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=30.9
Q ss_pred CCEEEEEcCC-ccCHHHHhhCCceEEe---cCcc-HHHh---hccCEEec
Q 002832 584 KHICGMTGDG-VNDAPALKKADIGIAV---ADAT-DAAR---SASDIVLT 625 (875)
Q Consensus 584 g~~Vam~GDG-~NDapALk~AdVGIam---g~gt-d~ak---~aADivL~ 625 (875)
...+.++||+ .||..|++.|++++++ |.+. +..+ ..+|+++.
T Consensus 193 ~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 193 SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred cceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 3568999999 7999999999998554 4333 3333 36888874
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=92.28 E-value=0.045 Score=56.83 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (875)
++ |+++++|++++++|++++++| |..........+++|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 45 899999999999999999999 77777777777888885
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.73 E-value=0.14 Score=52.24 Aligned_cols=108 Identities=9% Similarity=0.032 Sum_probs=68.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+... -..++.+.+... .+-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~--fd~i~~~~~~~~-----------------~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF--FTFCADASQLKN-----------------SKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG--CSEECCGGGCSS-----------------CTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc--cccccccccccC-----------------CCCcHH
Confidence 5689999999999999999999997653 3455677887532 112222222110 111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecCccHHHhhccCEEe
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVL 624 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~gtd~ak~aADivL 624 (875)
-=....+.+.-..+.+.|+||..+|..|-++|++ .|+++.|. ..||.++
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~ 203 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLL 203 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEE
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhc
Confidence 3234445554445678999999999999999986 34454442 2466655
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=89.67 E-value=0.08 Score=53.14 Aligned_cols=90 Identities=20% Similarity=0.204 Sum_probs=54.7
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHH----HHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKE----TGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~----ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
+.|++.+.+++|++.|+++.++|+-....+.. +.+..+... .+... ..+.+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 46789999999999999999999986432222 332222210 00000 001111
Q ss_pred --CHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEec
Q 002832 569 --FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA 610 (875)
Q Consensus 569 --sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg 610 (875)
.|+-.. +.+++.|- +.|+||..+|..+-++|++- |.+.
T Consensus 145 KP~p~~~~---~~~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 145 KPGQNTKS---QWLQDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CTTCCCSH---HHHHHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHH---HHHHHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 133223 34444454 99999999999999999975 4443
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=87.47 E-value=1 Score=47.59 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=34.4
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (875)
.+++-|++.+++++|++.|++++++| |.........-+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45667899999999999999999999 46666655556677774
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=86.66 E-value=0.43 Score=54.31 Aligned_cols=98 Identities=6% Similarity=-0.065 Sum_probs=59.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC------CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD------~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf 565 (875)
++.|++.++++.|++.|+++.++|+- ......... .|+... -..++.+++.. .
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~--fd~i~~~~~~~-----------------~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH--FDFLIESCQVG-----------------M 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT--SSEEEEHHHHT-----------------C
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh--eeEEEeccccC-----------------C
Confidence 57899999999999999999999985 222222211 133211 11222221111 0
Q ss_pred EEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEec
Q 002832 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (875)
Q Consensus 566 ar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg 610 (875)
..-.|+-=..+.+.+.-..+.+.|+||..||..+.++|++....-
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 112234444455555544556889999999999999999876553
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=86.58 E-value=1.9 Score=43.65 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=30.4
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (875)
.+++-+++.++++.+++.|+++..+| |.........-+++|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45556789999999999999999999 55554444444566764
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=81.57 E-value=1.6 Score=40.53 Aligned_cols=40 Identities=18% Similarity=0.041 Sum_probs=33.7
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCC---HHHHHHHHHHhCCC
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMG 532 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~ 532 (875)
+-|++.++|++|+++|++++++||.+ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45799999999999999999999997 45666677777874
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=80.80 E-value=0.81 Score=50.91 Aligned_cols=40 Identities=10% Similarity=0.136 Sum_probs=33.5
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCC------------HHHHHHHHHHhCCC
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQ------------LAIAKETGRRLGMG 532 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~------------~~tA~~ia~~lGi~ 532 (875)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 22367777888874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 875 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 4e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-24 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-19 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 4e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-14 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 2e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-10 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 2e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 8e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-05 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 3e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 4e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 5e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 112 bits (282), Expect = 2e-29
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM-GTNMYPSSA 540
DPPR + +I+ + G+ V MITGD A RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
+ + + E +A FA V P HK +IV+ LQ+ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
KKA+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 115 bits (288), Expect = 4e-28
Identities = 28/346 (8%), Positives = 85/346 (24%), Gaps = 37/346 (10%)
Query: 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV-----DKNLIEIFAKGVDAD-------A 361
+ + + + + + + + DK L ++ + G++++
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 362 VVLMAARASRVENQD--AIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSE 419
+ + ++ + + A + + N+ + L + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 420 GKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVP--DGRKESS 477
+ + A ++ ++ + A+ + + + + + +
Sbjct: 146 NIYAALEEFATTELHVSDATLFSLKGA----LWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 478 GGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM------ 531
+I + P + + G + + TG LG+
Sbjct: 202 TFKTGYIYQEIIL-RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 532 --GTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589
+ P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 590 TGDGVNDAPALKKADI-GIAVA-------DATDAARSASDIVLTEP 627
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 104 bits (260), Expect = 5e-24
Identities = 47/328 (14%), Positives = 100/328 (30%), Gaps = 93/328 (28%)
Query: 20 NVPMEEVFETLRCNKE-GLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWVM 77
+ EE ++ GL+ + + L +G+N+L E+ +S + + L ++
Sbjct: 6 SKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 78 EAAAIMAIAL---ANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAP 134
AA ++ L G + + I+ +L+ N+ + +E NA NA AL
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA 125
Query: 135 KSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTK 194
++ + P +L E GE L
Sbjct: 126 ATEQDKT-------------------------PLQQKLDE-----------FGEQL---- 145
Query: 195 GPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNFCICS 254
++ +++ G V +
Sbjct: 146 --------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK--------- 182
Query: 255 IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314
IAV + V IP +P V++ +A+G+ R++ + AI
Sbjct: 183 IAVALAV-------------------------AAIPEGLPAVITTCLALGTRRMAKKNAI 217
Query: 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNK 342
+ + ++E + + ++
Sbjct: 218 VRSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.0 bits (207), Expect = 1e-19
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 541
D + + ++ +G+ V MITGD A+ R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 542 LGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
P K E VK+LQA+ + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 99
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 79.0 bits (194), Expect = 4e-18
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 137 KVLRDGKWMEE--DAAILVPGDIISVKLGDIIPADARLLEGDP--LKIDQSALTGESLPV 192
KV R + + A +VPGDI+ V +GD +PAD R+L L++DQS LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 193 TKGPGDS-------------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
K ++SG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 71.0 bits (173), Expect = 2e-14
Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 27/148 (18%)
Query: 376 DAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKR--TALTYIDSEGKMHRVSKGA 429
DA ++A++ + ++ R +V + FN T+K + D+ V KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 430 PEQILNL----------VRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGG 479
PE+IL+ + E++ + G R L +P G+
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 480 P-----------WQFIGLMPLFDPPRHD 496
F+GLM + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.5 bits (143), Expect = 2e-10
Identities = 28/201 (13%), Positives = 63/201 (31%), Gaps = 37/201 (18%)
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQ 375
+ + E+A + LC+D + + + A+ + + + +
Sbjct: 45 GQFDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALTTLVEKMNVFNTE 98
Query: 376 DAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHR-----VSKGAP 430
+ + A R +++ L F+ K ++ ++ KGAP
Sbjct: 99 VRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAP 158
Query: 431 EQILNLVRN--------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKES 476
E +++ K +I + LR LA+A ++ P R+E
Sbjct: 159 EGVIDRCNYVRVGTTRVPMTGPVKEKILSVIK--EWGTGRDTLRCLALATRDTPPKREEM 216
Query: 477 SGGPWQ----------FIGLM 487
F+G++
Sbjct: 217 VLDDSSRFMEYETDLTFVGVV 237
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 58.5 bits (140), Expect = 5e-10
Identities = 21/157 (13%), Positives = 42/157 (26%), Gaps = 6/157 (3%)
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIV 551
R E + + +I+G + +Y + A +
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 134
Query: 552 ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611
+ K ++ L M GD V D A K +D+ A
Sbjct: 135 PHSCKGT------CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 49.7 bits (118), Expect = 2e-07
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
++++K+ GD D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 5e-07
Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 13/151 (8%)
Query: 480 PWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 539
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 540 ALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHI--CGMTGDGVNDA 597
L E + K +++K L+ + H M GDG D
Sbjct: 130 RLKFYFNGE---------YAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 598 PALKKADIGIAVA--DATDAARSASDIVLTE 626
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.7 bits (112), Expect = 2e-06
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 629 LSVIISAV 636
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.6 bits (107), Expect = 8e-06
Identities = 11/58 (18%), Positives = 18/58 (31%)
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ K + V ++ + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 44.4 bits (103), Expect = 2e-05
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 625 TEPGLSVIISAV 636
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 13/50 (26%), Positives = 18/50 (36%)
Query: 587 CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
+ GD ND P + A+ATD ++ SD V I
Sbjct: 170 ILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 44.2 bits (103), Expect = 3e-05
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.1 bits (95), Expect = 4e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIV 623
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (95), Expect = 4e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLT---EPGLSVIISAVLTSRAIF 643
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 40.7 bits (94), Expect = 5e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 572 HKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
K + + + I GDG ND L+ A IG+A+ A + ++A+D V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.2 bits (90), Expect = 0.001
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Query: 540 ALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPA 599
L + KD V +E ++ + ++ I GD ND
Sbjct: 163 ILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVF-GDNENDLFM 221
Query: 600 LKKADIGIAVADATDAARSASDIV 623
++A + +A+ +A + + ASDIV
Sbjct: 222 FEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 875 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.97 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.81 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.56 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.21 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.1 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.04 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.01 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.99 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.89 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.8 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.78 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.77 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.75 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.65 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.61 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.6 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.36 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.26 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.14 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.75 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.68 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.55 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.44 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.41 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.36 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.33 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.22 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.0 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.55 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.51 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.12 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.07 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.04 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.97 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.44 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.14 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.09 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.91 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 94.88 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 93.93 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.31 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.95 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 92.37 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 92.31 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 92.26 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 90.85 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 90.29 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 90.2 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 87.02 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 86.8 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 85.13 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 80.52 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=6.1e-39 Score=367.29 Aligned_cols=232 Identities=19% Similarity=0.230 Sum_probs=184.4
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCC-
Q 002832 16 VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGG- 92 (875)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~- 92 (875)
.+||+.+.||++++|+++ ++|||++||++|+++||+|++++++ ++.|+.|+++|++|+.++|+++++++++++....
T Consensus 2 ~~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~ 81 (472)
T d1wpga4 2 EAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 81 (472)
T ss_dssp TTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCT
T ss_pred cChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcc
Confidence 468999999999999999 5799999999999999999998766 6778899999999999999999999999875332
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCeEEEEecCCcCCCcEEEEecCCccccce
Q 002832 93 --KPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADA 170 (875)
Q Consensus 93 --~~~~~~~~~~ii~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiv~l~~G~~vPaD~ 170 (875)
...+|.++++|++++++|+.++++||+|+++++++++++.+++ ..||++|+|.
T Consensus 82 ~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~ 136 (472)
T d1wpga4 82 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQ 136 (472)
T ss_dssp TSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHH
T ss_pred cccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHH
Confidence 2347899999999999999999999999999999998876654 3578899988
Q ss_pred EEEecCCeeeeccccCCCCeeeecCCCCceeecceeccCceeEEEEEecchhhhhhhhhhhcccCCCCcHHHHHHHHHHH
Q 002832 171 RLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNF 250 (875)
Q Consensus 171 ~ll~g~~l~VdeS~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~~~ 250 (875)
++.+ +||+. |.+.++|..+|..|.+|++...+....
T Consensus 137 ~l~~-----------~g~~i------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 172 (472)
T d1wpga4 137 KLDE-----------FGEQL------------------SKVISLICVAVWLINIGHFNDPVHGGS--------------- 172 (472)
T ss_dssp HHHH-----------HHHHH------------------HHHHHHHHHHHHHHCCTTSSSCCSSSC---------------
T ss_pred HHHH-----------HHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHhhhh---------------
Confidence 7643 22222 111222333444444444433332221
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhcCCccccchhhhhccCceEE
Q 002832 251 CICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVL 330 (875)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llv~~iP~~Lp~~~~i~~~~~~~~l~~~~ilvk~~~~le~lg~v~~i 330 (875)
....+.+.+...++++++++|||||+++++++++|++||+|+|++||+++++|++|+..+.
T Consensus 173 -------------------~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~ 233 (472)
T d1wpga4 173 -------------------WIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYN 233 (472)
T ss_dssp -------------------SSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHH
T ss_pred -------------------hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH
Confidence 0122334555667888999999999999999999999999999999999999999999999
Q ss_pred Eeccc
Q 002832 331 CSDKT 335 (875)
Q Consensus 331 ~~DKT 335 (875)
|+|||
T Consensus 234 ~~~k~ 238 (472)
T d1wpga4 234 NMKQF 238 (472)
T ss_dssp HHHHH
T ss_pred HhHHh
Confidence 99887
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.4e-36 Score=296.23 Aligned_cols=148 Identities=41% Similarity=0.573 Sum_probs=136.4
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
||||||++++|+.||++||+|+|+|||++.||.++|+++||..+.. ....+.|.+.+. +...++.+..++..+|||+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD-LPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHH-SCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccch-hhHHHHhhhhhhhhhhhcc
Confidence 9999999999999999999999999999999999999999975432 223455666553 6677788899999999999
Q ss_pred CHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHH
Q 002832 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~g 639 (875)
+|+||..+|+.||++|++|+|+|||+||+|||++|||||+|++|+++|+++||++|++++|++++.+|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.97 E-value=1.2e-31 Score=250.60 Aligned_cols=125 Identities=35% Similarity=0.505 Sum_probs=110.1
Q ss_pred eEEEEeccCCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhh
Q 002832 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (875)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (875)
+..+.++++|++||+++++|+.||++||+++|+|||++.+|.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 445678999999999999999999999999999999999999999999984
Q ss_pred CcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 562 ~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.+|++++|++|.++|+.+|+. ++|+|+|||.||+|||++|||||+|++|+++++++||++|++++|++|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 379999999999999999875 68999999999999999999999999999999999999999999999999874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.94 E-value=3.1e-31 Score=294.55 Aligned_cols=314 Identities=10% Similarity=-0.022 Sum_probs=214.3
Q ss_pred ccchhhhhccCceEEEecccCccccCcccceeeeEE-----eccCCCChH-HHHHHHHHhc----cccccChHHHHHHHh
Q 002832 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE-----IFAKGVDAD-AVVLMAARAS----RVENQDAIDAAIVGM 385 (875)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~-----~~~~~~~~~-~~l~~~~~~~----~~~~~~~~~~ai~~~ 385 (875)
+-+.+.|+||..+++|+|||||+|.|+|++..+.-+ ....+.+.+ ++....+.+. ....+++...+++..
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQ 107 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHC
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 345667999999999999999999999988542200 001233322 2222221111 112344555555544
Q ss_pred cCChH----HHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHhcCCeE
Q 002832 386 LADPK----EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRS 461 (875)
Q Consensus 386 ~~~~~----~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rv 461 (875)
..... ..+..+.....+||++.+|+|++.....++.+..+.||+++.+. ..+.....+...+..++.+|+|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~ 183 (380)
T d1qyia_ 108 DEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQE 183 (380)
T ss_dssp SSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHH
T ss_pred HhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHH
Confidence 33221 22455677778999999999987654333333444566666542 12222445667778899999999
Q ss_pred EEEEEEecCCCCcCCCCCCeeEEEEeccCCCCCC--ChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCc
Q 002832 462 LAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH--DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 539 (875)
Q Consensus 462 l~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~--~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~ 539 (875)
+++|++..+..+. ....+....|++..+|++|| ++++++++||++||++.|+|||+..+|..+++++||........
T Consensus 184 l~~~~~~~~~~~~-~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~ 262 (380)
T d1qyia_ 184 WYLGSKLYEDVEK-KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADF 262 (380)
T ss_dssp HHHHHHHHHHHHC-SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGG
T ss_pred HHHhhhccccccc-ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcce
Confidence 9999876532111 12223355799999999665 99999999999999999999999999999999999964322222
Q ss_pred cccccccc--------ccCCcccHHHHhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC---ceEE
Q 002832 540 ALLGQNKD--------ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIA 608 (875)
Q Consensus 540 ~~~~~~~~--------~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~Ad---VGIa 608 (875)
++++++.. ......+-.+.+..+.+++|++|++|.++|+.++..++.|+|||||+||+||+|+|| |||+
T Consensus 263 i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~ 342 (380)
T d1qyia_ 263 IATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL 342 (380)
T ss_dssp EECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred EEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEe
Confidence 33332210 001111122344455678999999999999999999999999999999999999999 9999
Q ss_pred ec-CccHHHhh----ccCEEecCCChhHHHHHH
Q 002832 609 VA-DATDAARS----ASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 609 mg-~gtd~ak~----aADivL~~~~~~~i~~~i 636 (875)
|| .|++++++ .||+++ +++..+...+
T Consensus 343 ~G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 343 TGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp CBTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred cCCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 99 78876665 799999 6688776654
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=7.7e-26 Score=203.72 Aligned_cols=97 Identities=39% Similarity=0.591 Sum_probs=88.5
Q ss_pred cEEEEECCeE--EEEecCCcCCCcEEEEecCCccccceEEEe--cCCeeeeccccCCCCeeeecCC-------------C
Q 002832 135 KSKVLRDGKW--MEEDAAILVPGDIISVKLGDIIPADARLLE--GDPLKIDQSALTGESLPVTKGP-------------G 197 (875)
Q Consensus 135 ~~~V~rdg~~--~~I~~~~Lv~GDiv~l~~G~~vPaD~~ll~--g~~l~VdeS~LTGEs~pv~K~~-------------~ 197 (875)
.++|+|+|++ ++|+++||||||+|.|++||+|||||+|++ +.++.||||+|||||.|+.|.+ .
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5799999985 789999999999999999999999999986 4457899999999999999975 3
Q ss_pred CceeecceeccCceeEEEEEecchhhhhhhhhhh
Q 002832 198 DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (875)
Q Consensus 198 ~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~ 231 (875)
+++|+||.|.+|+++++|++||.+|.+|||++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5699999999999999999999999999998753
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.81 E-value=1.1e-19 Score=184.35 Aligned_cols=123 Identities=24% Similarity=0.333 Sum_probs=99.2
Q ss_pred ccChHHHHHHHhc----CChHHHhhcccEEEEecCCCCCceEEEEEEcC--CCeEEEEEcCcHHHHHHhccC--------
Q 002832 374 NQDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDS--EGKMHRVSKGAPEQILNLVRN-------- 439 (875)
Q Consensus 374 ~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~--~g~~~~~~KGa~e~i~~~~~~-------- 439 (875)
.+||.|.|++.++ .+....+..++++..+||+|++|+|+++++.. ++++++|+|||||.|+++|+.
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred ccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCcee
Confidence 3689999998764 34556678899999999999999999999854 456888999999999999973
Q ss_pred --ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCC-----------cCCCCCCeeEEEEeccCCCCCCC
Q 002832 440 --KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR-----------KESSGGPWQFIGLMPLFDPPRHD 496 (875)
Q Consensus 440 --~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~-----------~~~~e~~l~~lG~i~~~D~lr~~ 496 (875)
+++.++.+.+.+++|+.+|+||||+|||.++..+ .+..|++|+|+|+++|+||||++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred echHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 5677889999999999999999999999987543 23457899999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.56 E-value=1.3e-15 Score=156.63 Aligned_cols=97 Identities=20% Similarity=0.369 Sum_probs=81.1
Q ss_pred hhcccEEEEecCCCCCceEEEEEEcCCC-----eEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHH--H
Q 002832 393 RANIQEVHFLPFNPTDKRTALTYIDSEG-----KMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKF--A 455 (875)
Q Consensus 393 ~~~~~~l~~~pf~~~~k~~sv~~~~~~g-----~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~ 455 (875)
+..++++..+||||+||||+++++.+++ .+.+|+|||||.|+++|+. +++.++.+.+.++.+ +
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 4678999999999999999999986554 3578999999999999973 456778888888876 6
Q ss_pred hcCCeEEEEEEEecCCCCc----------CCCCCCeeEEEEecc
Q 002832 456 ERGLRSLAVAYQEVPDGRK----------ESSGGPWQFIGLMPL 489 (875)
Q Consensus 456 ~~G~rvl~~A~~~~~~~~~----------~~~e~~l~~lG~i~~ 489 (875)
++|+|||++|||+++..+. +..|++|+|+|+++|
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999875432 235789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.21 E-value=2.2e-11 Score=122.97 Aligned_cols=148 Identities=22% Similarity=0.212 Sum_probs=104.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC---cccc-c-----cccc---------------
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS---SALL-G-----QNKD--------------- 547 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~---~~~~-~-----~~~~--------------- 547 (875)
.+.+++.++|++|+++|++++++||++...+...++.+++....... .... + ...+
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 46788999999999999999999999999999999999885321100 0000 0 0000
Q ss_pred ------------------ccCCcccHHHHhhhCc-----------EEEEeCHHHHHHHHHHHhhC----CCEEEEEcCCc
Q 002832 548 ------------------ESIVALPVDELIEKAD-----------GFAGVFPEHKYEIVKRLQAR----KHICGMTGDGV 594 (875)
Q Consensus 548 ------------------~~~~~~~~~~~~~~~~-----------vfar~sP~~K~~iV~~lq~~----g~~Vam~GDG~ 594 (875)
.......+.+++++.. +-.......|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 0001111233333221 22223345677777776543 34689999999
Q ss_pred cCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHHH
Q 002832 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (875)
Q Consensus 595 NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~g 639 (875)
||.||++.|++||||+++++.+|++||+|+.+++...+.+++++-
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999998887753
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.10 E-value=2.3e-10 Score=115.54 Aligned_cols=147 Identities=20% Similarity=0.151 Sum_probs=103.2
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC--c-cccccc-ccc------------------
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS--S-ALLGQN-KDE------------------ 548 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~--~-~~~~~~-~~~------------------ 548 (875)
.++.+++.+++++|++.|++++++||.+...+..++..+|+....... . ....+. ...
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence 456789999999999999999999999999999999999985421100 0 000000 000
Q ss_pred -----------------cCCcccHHHHhh---h--CcE-----EEEeCH--HHHHHHHHHHhhC----CCEEEEEcCCcc
Q 002832 549 -----------------SIVALPVDELIE---K--ADG-----FAGVFP--EHKYEIVKRLQAR----KHICGMTGDGVN 595 (875)
Q Consensus 549 -----------------~~~~~~~~~~~~---~--~~v-----far~sP--~~K~~iV~~lq~~----g~~Vam~GDG~N 595 (875)
.......+.+.. . ..+ +....| .+|...++.+.+. ...|+++|||.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n 178 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 178 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence 011111221111 1 111 122333 4788888766543 234888899999
Q ss_pred CHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 596 DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 596 DapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
|.+|++.|++||||+++.+.+|+.||+|...++..+|.++++
T Consensus 179 D~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 179 DMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp GHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred hHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence 999999999999999999999999999999999999988876
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.04 E-value=1.9e-10 Score=111.21 Aligned_cols=107 Identities=24% Similarity=0.300 Sum_probs=85.0
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHHHHHHHHH
Q 002832 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (875)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 578 (875)
.+|+.|++.|+.+.++||++...+...++++++.. ++.. ..+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~--~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------cccc--cccHHHHHH
Confidence 47999999999999999999999999999998842 1222 234555444
Q ss_pred HHhh----CCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCC----hhHHHHHHH
Q 002832 579 RLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVL 637 (875)
Q Consensus 579 ~lq~----~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~----~~~i~~~i~ 637 (875)
.+.+ ....|+++|||.||.|+|+.|++|+||++|++.+|+.||+|+..+. +..+.+.|.
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il 153 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMIL 153 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHH
Confidence 4333 2467999999999999999999999999999999999999998876 444444443
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=1.7e-10 Score=116.13 Aligned_cols=126 Identities=18% Similarity=0.152 Sum_probs=91.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc----ccccccccCCcccHHHHhhhCcEEEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL----LGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
+++|++.+.|+.||+.|++++++||.....+..+++.+|+.........+ +|..... ... ...
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~-~~~------------~p~ 148 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF-DET------------QPT 148 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEE-CTT------------SGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccc-eee------------eee
Confidence 46899999999999999999999999999999999999996321100000 0100000 000 001
Q ss_pred eCHHHHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhCCceEEec--CccHHHhhccCEEecCCChhHH
Q 002832 568 VFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA--DATDAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~--g~~Vam~GDG~NDapALk~AdVGIamg--~gtd~ak~aADivL~~~~~~~i 632 (875)
..+..|.++++.++++ -..+.++|||.||.+|++.|+++||++ ......++.||.++. +|..+
T Consensus 149 ~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~el 215 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVEL 215 (217)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGG
T ss_pred eccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHHh
Confidence 2357799999999864 246899999999999999999999997 345666778999884 46543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.99 E-value=1.1e-10 Score=117.68 Aligned_cols=148 Identities=14% Similarity=0.051 Sum_probs=107.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcc-cccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA-LLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+......... ..+..... ..........++..|
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~-------~~~~~~~~~~~~~k~ 147 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHI-------DWPHSCKGTCSNQCG 147 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEE-------ECTTCCCTTCCSCCS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCccee-------ccccccccccccCCH
Confidence 5789999999999999999999999999999999999987532211111 00100000 000001123456789
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhh-ccCEEecCCChhHHHHHHHHHHHHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS-ASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~-aADivL~~~~~~~i~~~i~~gR~~~~~i~ 647 (875)
+.|..+++.++..++.|.|+||+.||.+|+++||+++|++...+.+++ ..+.+- -++|+.|...++.-..+.+.|+
T Consensus 148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~~ 224 (226)
T d2feaa1 148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWLQ 224 (226)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHHT
T ss_pred HHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999865555544 445433 4689999988877666655543
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=1.5e-09 Score=112.51 Aligned_cols=71 Identities=21% Similarity=0.207 Sum_probs=59.6
Q ss_pred EeCHH--HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 567 GVFPE--HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 567 r~sP~--~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
..+|. +|...++.+.+. ...++++|||.||.+||+.|+.|+||+++.+..|+.||+|...++=.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 34554 699888888764 234889999999999999999999999999999999999988777677777765
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.80 E-value=8.5e-09 Score=101.34 Aligned_cols=130 Identities=16% Similarity=0.166 Sum_probs=95.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
+..++....++.+ +.+.++..+|+.............++...... .+..... ..........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~-------------~~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDDS-------------DRVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECTT-------------SCEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcc--eeeeecc-------------cccccccccchh
Confidence 5566777777766 47899999999999999999998887532100 0000000 001123445566
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~~ 638 (875)
.+...++.++...+-|+++|||.||.+||+.|++||||+...++.++++|++.. .|+..+++++..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 677788888888999999999999999999999999998777888889998875 558888877754
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.78 E-value=2e-09 Score=111.36 Aligned_cols=72 Identities=21% Similarity=0.243 Sum_probs=61.4
Q ss_pred EEeCHH--HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 566 AGVFPE--HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 566 ar~sP~--~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
-.++|. +|..-++.|+++ | ..|.++|||.||.|||+.|+.|+||++|++..|+.||+|+.+++-.++.++|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 356664 599999888664 3 34889999999999999999999999999999999999998888788887775
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.77 E-value=5e-09 Score=109.19 Aligned_cols=71 Identities=23% Similarity=0.291 Sum_probs=60.5
Q ss_pred EeCHH--HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 567 GVFPE--HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 567 r~sP~--~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.++|. .|..-++.+.+. | +.|+++|||.||.+||+.|+.|+||++|++.+|+.||++....+-.++.++++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 35554 798888888654 2 35899999999999999999999999999999999999998777778887775
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.75 E-value=7.3e-09 Score=102.09 Aligned_cols=136 Identities=21% Similarity=0.188 Sum_probs=92.7
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.+++.+.++.++..|..+.++||.....+....++.++..... ..+............ .....+...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~ 144 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA--NRLIVKDGKLTGDVE-------GEVLKENAKG 144 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTEEEEEEE-------CSSCSTTHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh--hhhcccccccccccc-------cccccccccc
Confidence 4788899999999999999999999999999999999888743110 000000000000000 0000001112
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHH
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
.-...+.+.++-..+.+.++|||.||.||++.|++|||| ++.+..++.||+|+-++|+..|+++|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 223333344444455688999999999999999999999 78899999999999888898887654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.65 E-value=6.2e-09 Score=107.22 Aligned_cols=71 Identities=25% Similarity=0.277 Sum_probs=59.9
Q ss_pred EeCHH--HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 567 GVFPE--HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 567 r~sP~--~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.+.|. .|..-++.|.++ ...++++|||.||.+||+.|+.|+||++|++.+|+.||+|..+++=..+.++++
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 255 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHH
Confidence 44453 688888877653 345888999999999999999999999999999999999988877788888885
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.61 E-value=3.1e-08 Score=102.60 Aligned_cols=66 Identities=27% Similarity=0.299 Sum_probs=52.3
Q ss_pred HHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCCh-hHHHHHHH
Q 002832 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL-SVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~----g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~-~~i~~~i~ 637 (875)
.|..-++.+.+. ...|+++|||.||.+||+.|+.|+||++|.+.+|+.||+|+..++- ..+..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 566666665543 3569999999999999999999999999999999999999975543 33555543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.60 E-value=2.5e-08 Score=102.98 Aligned_cols=71 Identities=24% Similarity=0.287 Sum_probs=60.0
Q ss_pred EeCHH--HHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 567 GVFPE--HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 567 r~sP~--~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
.++|. .|..-|+.+.+. | ..|+++|||.||.|||+.|++|+||++|++.+|+.||+|+.+++-.++..+|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45554 688888877553 2 34788999999999999999999999999999999999998888888888775
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.36 E-value=5.8e-07 Score=90.36 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=39.4
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (875)
.+...+.++++|++|+++|++++++||.+...+..+.+++++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 44556789999999999999999999999999999999999853
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.26 E-value=7.1e-07 Score=90.24 Aligned_cols=68 Identities=19% Similarity=0.161 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccC-------EEecCCChhHHHHHHH
Q 002832 570 PEHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 637 (875)
Q Consensus 570 P~~K~~iV~~lq~~-g---~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aAD-------ivL~~~~~~~i~~~i~ 637 (875)
..+|...++.+.+. | ..|.++|||.||.|||+.|+.|++|+++.+..|+.|| ++-..++-..+.++++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 45799999888765 2 3488899999999999999999999999999999988 4545555666776664
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.14 E-value=4.9e-06 Score=82.47 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=38.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (875)
.+-+.+++++++|+++|+.++++||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46789999999999999999999999999999999999984
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.75 E-value=1.7e-05 Score=72.27 Aligned_cols=121 Identities=20% Similarity=0.311 Sum_probs=85.2
Q ss_pred CCCChHHHHHHHHHhccccccChHHHHHHHhcCChHHH---hhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHH
Q 002832 355 KGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEA---RANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPE 431 (875)
Q Consensus 355 ~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~---~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e 431 (875)
.|.++++++.+|+.++.. +.||+.+|++.++++.... ..........||....+...+. .+|+ .+.+|+++
T Consensus 11 ~G~~~~ell~~AA~aE~~-SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g~--~v~~G~~~ 84 (136)
T d2a29a1 11 QGVDEKTLADAAQLASLA-DETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDNR--MIRKGSVD 84 (136)
T ss_dssp TTCCHHHHHHHHHHHHHT-CCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETTE--EEEEECHH
T ss_pred CCCCHHHHHHHHHHHhCC-CCchHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECCE--EEEecHHH
Confidence 689999999999988764 4579999999886432111 1233444556777666544432 2565 45669998
Q ss_pred HHHHhccC-ChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEeccCCCCC
Q 002832 432 QILNLVRN-KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPR 494 (875)
Q Consensus 432 ~i~~~~~~-~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 494 (875)
.+.+.+.. .......+.+.++.++.+|.+++.+|... +++|++++.|++|
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 77654321 11224567788899999999999999865 8999999999997
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.68 E-value=3.2e-05 Score=76.65 Aligned_cols=125 Identities=14% Similarity=0.180 Sum_probs=83.9
Q ss_pred CCCCChHHHHHHHHhCC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 492 PPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
++-|++.+++++|++.| +++.++||.....+..+.++.|+..-. ..++.+++... . .-.|
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~---~--------------k~~p 151 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF--PFGAFADDALD---R--------------NELP 151 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC--SCEECTTTCSS---G--------------GGHH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc--ccccccccccc---c--------------cchh
Confidence 34689999999999987 899999999999999999999996421 12222211100 0 0012
Q ss_pred HHHHHHHHHHhhC---CCEEEEEcCCccCHHHHhhCC---ceEEecC--ccHHHhhccCEEecCCChhHHHHHHH
Q 002832 571 EHKYEIVKRLQAR---KHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 ~~K~~iV~~lq~~---g~~Vam~GDG~NDapALk~Ad---VGIamg~--gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
+--...++.+... .+.+.|+||+.+|..|-+.|+ |||+-|. ..+..+..||+++ ++++.+.+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 2223334444322 356899999999999999999 4455452 2334555689998 67888887764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.55 E-value=2.6e-05 Score=76.75 Aligned_cols=124 Identities=18% Similarity=0.161 Sum_probs=86.9
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++++.++.|++.|+++.++||.....+..+.+++|+.... ..++...+... ..-.|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~~-----------------~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLPE-----------------IKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSSS-----------------CTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc--ccccccccccc-----------------ccccch
Confidence 46899999999999999999999999999999999999985321 11222211110 111245
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecC----ccHHHhhccCEEecCCChhHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 636 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~----gtd~ak~aADivL~~~~~~~i~~~i 636 (875)
--..+.+.++-....+.|+||..+|..+-++|++ .|.+.. ..+.....+|+++ ++++.+++.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 4455566666667789999999999999999986 444432 2334555689888 5677766543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.44 E-value=0.00017 Score=72.62 Aligned_cols=126 Identities=13% Similarity=0.139 Sum_probs=87.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++||.+...+..+-++.|+..-. ....+.+++.. ..+-.|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~~-----------------~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP-----------------AGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-ccccccccccc-----------------ccccChH
Confidence 57899999999999999999999999999999999999885321 12223322211 1122344
Q ss_pred HHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCce-EEecCccH---------------------------HHhhccCE
Q 002832 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG-IAVADATD---------------------------AARSASDI 622 (875)
Q Consensus 572 ~K~~iV~~lq~~-g~~Vam~GDG~NDapALk~AdVG-Iamg~gtd---------------------------~ak~aADi 622 (875)
.=....+.+.-. .+.++|+||..+|..+=++|++- |++..|.. ..+.-||+
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~ 240 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 240 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCE
Confidence 445555666543 46799999999999999999963 34433320 11123899
Q ss_pred EecCCChhHHHHHHH
Q 002832 623 VLTEPGLSVIISAVL 637 (875)
Q Consensus 623 vL~~~~~~~i~~~i~ 637 (875)
++ +++..++..|+
T Consensus 241 vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 241 TI--ETMQELESVME 253 (257)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred EE--CCHHHHHHHHH
Confidence 99 66888887775
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.41 E-value=0.0003 Score=72.06 Aligned_cols=131 Identities=11% Similarity=0.077 Sum_probs=82.1
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE----
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG---- 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar---- 567 (875)
++||++++.++.|++.|+++.++||--.....++.+++|+..+.. .+..+.++- ++. .+...
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni---~I~sN~l~f--~~~---------~~~~~~~~~ 200 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMDF--DEN---------GVLKGFKGE 200 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE---EEEEECEEE--CTT---------SBEEEECSS
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCc---eEEeeEEEE--eCC---------eeEeeccCC
Confidence 589999999999999999999999999999999999999864311 011110000 000 00000
Q ss_pred -eCHHHHHHHH----HH--HhhCCCEEEEEcCCccCHHHHhh---CCceEEec--Cc-----cHHHhhccCEEecCCChh
Q 002832 568 -VFPEHKYEIV----KR--LQARKHICGMTGDGVNDAPALKK---ADIGIAVA--DA-----TDAARSASDIVLTEPGLS 630 (875)
Q Consensus 568 -~sP~~K~~iV----~~--lq~~g~~Vam~GDG~NDapALk~---AdVGIamg--~g-----td~ak~aADivL~~~~~~ 630 (875)
.....|...+ .. .++....|.++|||+||.+|.+. ++.+++.| +. -+.=+++-|||+.+|.--
T Consensus 201 ~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~ 280 (291)
T d2bdua1 201 LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESL 280 (291)
T ss_dssp CCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBC
T ss_pred ccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCCh
Confidence 0112232221 11 22234578899999999999874 45555555 21 122346789999988766
Q ss_pred HHHHHH
Q 002832 631 VIISAV 636 (875)
Q Consensus 631 ~i~~~i 636 (875)
.++..|
T Consensus 281 ~v~~~i 286 (291)
T d2bdua1 281 EVVNSI 286 (291)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 555544
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.0001 Score=72.14 Aligned_cols=120 Identities=16% Similarity=0.186 Sum_probs=82.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+..- -..++.+++.. .++-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~--F~~i~~~~~~~-----------------~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS--FDALASAEKLP-----------------YSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEECTTSS-----------------CCTTSTH
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccc--ccccccccccc-----------------cchhhHH
Confidence 4579999999999999999999999999999999999999532 12233332211 1122234
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-EecC--c-cHHHhhccCEEecCCChhHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVAD--A-TDAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGI-amg~--g-td~ak~aADivL~~~~~~~i 632 (875)
-=..+.+.+.-..+.++|+||..+|..|-++|++.. ++.. . .+.-...||.++ ++|..+
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhhC
Confidence 445556666655667999999999999999999643 2321 1 222234678887 446543
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=1.4e-05 Score=79.43 Aligned_cols=54 Identities=19% Similarity=0.257 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhC-CCEEEEEcC----CccCHHHHhhCC-ceEEecCccHHHhhccCEEe
Q 002832 571 EHKYEIVKRLQAR-KHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVL 624 (875)
Q Consensus 571 ~~K~~iV~~lq~~-g~~Vam~GD----G~NDapALk~Ad-VGIamg~gtd~ak~aADivL 624 (875)
-.|..-++.|.+. ..-|.++|| |.||.+||++|. .|+||+++.|..|..+|++|
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 3588888888654 457999999 569999999997 69999999999999999876
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.22 E-value=0.00014 Score=71.37 Aligned_cols=58 Identities=10% Similarity=0.219 Sum_probs=43.8
Q ss_pred EEeCH--HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCEEecC
Q 002832 566 AGVFP--EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626 (875)
Q Consensus 566 ar~sP--~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADivL~~ 626 (875)
-.+.| .+|..-++.|.++.. +.++||+.||.+|++.|+-|+||+.|. ++.+|++.+.+
T Consensus 151 idi~p~g~~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 151 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD 210 (229)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS
T ss_pred EEEecCCCCHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC
Confidence 34445 469999999988755 567899999999999997777765443 25678888843
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.00 E-value=0.0003 Score=68.23 Aligned_cols=120 Identities=10% Similarity=0.022 Sum_probs=83.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.+++.+.++.+++.| ++.++|+.....+..+.+++|+.... ..++.+.+ ..+..|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~~-------------------~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSSP-------------------EAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECS-------------------SCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--cccccccc-------------------ccccccc
Confidence 56799999999999775 89999999999999999999985321 11121111 1123355
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEe--cC--ccHHHhhccCEEecCCChhHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV--AD--ATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIam--g~--gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
-...+.+.++-....+.|+||+.||..|-++|++ .|++ |. ..+.....+|+++ +++..+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 5555555555555678999999999999999997 4444 42 2344444589987 557776654
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.55 E-value=0.0028 Score=62.10 Aligned_cols=124 Identities=16% Similarity=0.134 Sum_probs=80.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.||+.++++.|+ +|+++.++|+........+.+.+|+.... ..++...+.. ..+-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~~-----------------~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF--DSITTSEEAG-----------------FFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEHHHHT-----------------BCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc--cccccccccc-----------------ccchhhH
Confidence 56899999999996 58999999999999999999999985321 1111111100 0111122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCceEE-e--cCccHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIA-V--ADATDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG-~NDapALk~AdVGIa-m--g~gtd~ak~aADivL~~~~~~~i~~~i~ 637 (875)
-=..+.+.+.-....+.|+||. .||..+-++|++-.. + +.......+.+|+++ ++++.+++.++
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 2233334443344569999997 699999999987532 2 222333445789988 55888888776
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.51 E-value=0.0051 Score=58.10 Aligned_cols=134 Identities=17% Similarity=0.156 Sum_probs=76.8
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHH--------H-------HHHHHHHhCCCCCCCCCcccccccccccCCcccHHH
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------I-------AKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDE 557 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~--------t-------A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (875)
+-|++.+++++|+++|+++.++|..... . ........|+.... ..+.....+. ....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~cp~~p~~-----~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG---IYYCPHHPQG-----SVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCBTTC-----SSGG
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccc---eeeccccccc-----cccc
Confidence 4589999999999999999999987521 0 11111222221100 0000000000 0000
Q ss_pred HhhhCcEEEEeCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce--EEecCc---cHHHhhccCEEecCCChhHH
Q 002832 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVADA---TDAARSASDIVLTEPGLSVI 632 (875)
Q Consensus 558 ~~~~~~vfar~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG--Iamg~g---td~ak~aADivL~~~~~~~i 632 (875)
..+...+..-.|.-=..+.+.+.-.-+.+.||||..+|..|=++|+++ +.+..| .+.....||+++ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 000001112234444555666655555689999999999999999995 334332 345556799998 678988
Q ss_pred HHHHH
Q 002832 633 ISAVL 637 (875)
Q Consensus 633 ~~~i~ 637 (875)
++.|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88875
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.12 E-value=0.00069 Score=65.48 Aligned_cols=120 Identities=9% Similarity=0.066 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.+.++.|+ +++++.++|+-....+..+.++.|+.... ..++.+.+.. ...-.|+
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~p~ 141 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDTP-----------------KRKPDPL 141 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGSS-----------------CCTTSSH
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccccc--cccccccccc-----------------cchhhhh
Confidence 46699999999997 58999999999999999999988875321 1111111110 0111244
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe---cCccHHHhhccCEEecCCChhHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVII 633 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam---g~gtd~ak~aADivL~~~~~~~i~ 633 (875)
--..+++.++-..+.+.|+||..+|..+-++|++.... |..+....+.+|.++ +++..|.
T Consensus 142 ~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 142 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 44555555544445688999999999999999987654 333444456788887 4566554
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.07 E-value=0.0049 Score=60.36 Aligned_cols=116 Identities=15% Similarity=0.047 Sum_probs=76.0
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
-.+.||+.+.+++|++.|+++.++|+..........+.+|+..-. .......++. ...+-.|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~-----------------~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDTK-----------------IGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECGG-----------------GCCTTCH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceeeccc-----------------cccCCCc
Confidence 457899999999999999999999999999988888888874311 0000000000 0112223
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEe----cC-ccHHHhhccCEEe
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----AD-ATDAARSASDIVL 624 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIam----g~-gtd~ak~aADivL 624 (875)
+-=....+.+.-..+.++|+||..+|..+-++|++-... |+ ...--...++.++
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i 246 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 246 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEE
Confidence 333444555555556799999999999999999985544 22 1222334566666
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.04 E-value=0.0024 Score=59.29 Aligned_cols=88 Identities=11% Similarity=0.027 Sum_probs=62.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeC-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF- 569 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~s- 569 (875)
++.|++.++++.|++.|+++.++|+- ....+...-+..++.... . .+...-.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~--~------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF--I------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC--S------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc--e------------------------eeecccCC
Confidence 57899999999999999999999964 456677776777763210 0 0111112
Q ss_pred -HHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc
Q 002832 570 -PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605 (875)
Q Consensus 570 -P~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV 605 (875)
|+.-.++.+.+.-..+.+.|+||..+|..+-++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 344445555555556679999999999999999977
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.97 E-value=0.0032 Score=60.33 Aligned_cols=118 Identities=17% Similarity=0.103 Sum_probs=75.8
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++.|+++.++|+... .+..+-++.|+.... ..++.+++.. ...-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~~i~~s~~~~-----------------~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--TEILTSQSGF-----------------VRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--EEEECGGGCC-----------------CCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc--cccccccccc-----------------ccchhHH
Confidence 4679999999999999999999998554 456677889985321 1111111110 1112344
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCccHHHhhccCEEecCCChhHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISA 635 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~gtd~ak~aADivL~~~~~~~i~~~ 635 (875)
--..+.+.+.-....+.|+||+.+|..+-++|++- |.+..++. .+|..+ +++..+...
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHH
Confidence 45555666655556899999999999999999984 34545432 244443 345555443
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.44 E-value=0.01 Score=55.96 Aligned_cols=109 Identities=13% Similarity=0.051 Sum_probs=70.4
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++++.+++|++.|+++.++|+-+..+. ++-+..|+... -..++.+++... ..-.|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~--fd~i~~~~~~~~-----------------~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY--FTEVVTSSSGFK-----------------RKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG--EEEEECGGGCCC-----------------CTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc--cccccccccccc-----------------cCCCHH
Confidence 5679999999999999999999998766554 45677887531 112222221110 111233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEEecCccHHHhhccCE
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 622 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIamg~gtd~ak~aADi 622 (875)
--..+.+.+.- ..+.|+||..+|..|-++|++=...-++.+-.++..||
T Consensus 139 ~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 33334444432 34889999999999999998765444566666666653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.14 E-value=0.0082 Score=57.36 Aligned_cols=91 Identities=19% Similarity=0.284 Sum_probs=64.9
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCC----HHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEe
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~----~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (875)
+.|++.+.++.+++.|++|.-|||.. ..|++.+-+.+|+.........+.+.+..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~--------------------- 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPG--------------------- 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTT---------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCC---------------------
Confidence 56799999999999999999999975 36777777789997543333333322211
Q ss_pred CHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEe
Q 002832 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV 609 (875)
Q Consensus 569 sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIam 609 (875)
.+.|...|+. -.+++++||..+|..|-++|++ +|-+
T Consensus 146 -K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 146 -QNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp -CCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred -chHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 1235555543 4589999999999999999985 4443
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.09 E-value=0.02 Score=54.87 Aligned_cols=141 Identities=15% Similarity=0.165 Sum_probs=93.4
Q ss_pred CCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccccccc------c----------cCCcc---
Q 002832 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD------E----------SIVAL--- 553 (875)
Q Consensus 493 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~------~----------~~~~~--- 553 (875)
+-||+.++++.+++. ....++|---.+-..++|+.+|+..+... ..+.-++.+ + +.+.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~-T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~ 159 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHG-TEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 159 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEE-EBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeec-ccccccccCCChHHHHHHHHHhhhccCccHHHHH
Confidence 458999999999854 57888888888899999999999643111 001000000 0 00111
Q ss_pred ----------cHHHHhhhCcEEEEeCHHHHHHHHHHHhhC-C-CEEEEEcCCccCHHHHhhCCc--eEEec-CccHHHhh
Q 002832 554 ----------PVDELIEKADGFAGVFPEHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKKADI--GIAVA-DATDAARS 618 (875)
Q Consensus 554 ----------~~~~~~~~~~vfar~sP~~K~~iV~~lq~~-g-~~Vam~GDG~NDapALk~AdV--GIamg-~gtd~ak~ 618 (875)
+..++++++... --..|.++++..-+. + ..-+.+||.+.|..+|+.|.= |+|++ +|.+-|..
T Consensus 160 e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~ 236 (308)
T d1y8aa1 160 RKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALK 236 (308)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHT
T ss_pred HHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccc
Confidence 122223333322 225666666544322 2 224789999999999998864 99998 99999999
Q ss_pred ccCEEecCCChhHHHHHHHH
Q 002832 619 ASDIVLTEPGLSVIISAVLT 638 (875)
Q Consensus 619 aADivL~~~~~~~i~~~i~~ 638 (875)
.||+.+..++...+...+..
T Consensus 237 eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 237 HADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp TCSEEEECSSTHHHHHHHHH
T ss_pred ccceEEeccchhHHHHHHHH
Confidence 99999999998887776653
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.91 E-value=0.023 Score=55.66 Aligned_cols=124 Identities=11% Similarity=0.118 Sum_probs=80.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
++.|++.++++.|++ |+++.++|+.+.......-+++|+.... ..++.+.+.. .++-.|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~~-----------------~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc--cccccccccc-----------------cchhhhh
Confidence 467999999999985 8999999999999999999999985321 1222221111 0111122
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce-EEec--Cc--cHHHhhccCEEecCCChhHHHHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVA--DA--TDAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdVG-Iamg--~g--td~ak~aADivL~~~~~~~i~~~i~ 637 (875)
-=..+.+.+.-....+.|+||.. +|..+-+.|++. +..- .+ .+.....+|+++ +++..+...++
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 22333444443445688999996 899999999986 4432 11 222233478888 45888887775
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.88 E-value=0.071 Score=45.60 Aligned_cols=103 Identities=16% Similarity=0.221 Sum_probs=66.3
Q ss_pred CChHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhcccEEEEecCCCCCceEEEEEEcCCCeEEEEEcCcHHHHHHh
Q 002832 357 VDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNL 436 (875)
Q Consensus 357 ~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pf~~~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~ 436 (875)
.++++++.+++..+. .+.||+.+|+++++.+...........+..| .+ ++ .|+. +.-|+++.+.+.
T Consensus 10 ~~e~elL~~aaslE~-~S~HPlA~AIv~~a~~~~~~~~~~~~~~~~~---G~---Gi-----~g~~--v~vG~~~~~~~~ 75 (113)
T d2b8ea2 10 GDERELLRLAAIAER-RSEHPIAEAIVKKALEHGIELGEPEKVEVIA---GE---GV-----VADG--ILVGNKRLMEDF 75 (113)
T ss_dssp SCHHHHHHHHHHHTT-TCCSHHHHHHHHHHHTTTCCCCCCSCEEEET---TT---EE-----EETT--EEEECHHHHHHT
T ss_pred CCHHHHHHHHHHHHC-cCCCchHHHHHHHHHHhcCCCCccccceeec---cc---eE-----EeEE--EEECcHHHHHhc
Confidence 478888888877654 4567999999988754321111222222222 11 11 1122 334999998764
Q ss_pred ccCChHHHHHHHHHHHHHHhcCCeEEEEEEEecCCCCcCCCCCCeeEEEEecc
Q 002832 437 VRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPL 489 (875)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~~~~~~~~~~~~e~~l~~lG~i~~ 489 (875)
.-. .++.+.+.++.+..+|..++.++... .++|++++
T Consensus 76 ~~~---~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 76 GVA---VSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TCC---CCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CCC---CCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 322 23466778889999999999999876 89999876
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=93.93 E-value=0.08 Score=47.21 Aligned_cols=95 Identities=12% Similarity=-0.017 Sum_probs=60.2
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCCHH----HHHHHHH------H-hCCCCCCCCCcccccccccccCCcccHHHH
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IAKETGR------R-LGMGTNMYPSSALLGQNKDESIVALPVDEL 558 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~----tA~~ia~------~-lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (875)
+|++.|++.+.++.|++.|++++++||-+.. |...+.. . .+.... ........
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~----~~~~~~~~------------ 97 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLV----MQCQREQG------------ 97 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCS----EEEECCTT------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEE----Eeeccccc------------
Confidence 5789999999999999999999999997631 1111111 0 011000 00000000
Q ss_pred hhhCcEEEEeCHHHHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCCce
Q 002832 559 IEKADGFAGVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIG 606 (875)
Q Consensus 559 ~~~~~vfar~sP~~K~~iV~~lq~~g-~~Vam~GDG~NDapALk~AdVG 606 (875)
-.|-.++-|..+.+.+...+ .+++|+||-..|+.|.+++++=
T Consensus 98 ------~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 98 ------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ------ccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 01223466778877776654 4678899999999999998763
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.31 E-value=0.029 Score=53.87 Aligned_cols=111 Identities=7% Similarity=0.007 Sum_probs=68.9
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++-|++.+.++.|++.|+++.++|+... +...-+..|+.... ..++.+.+.. ..+-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF--DAIADPAEVA-----------------ASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC--SEECCTTTSS-----------------SCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc--cccccccccc-----------------ccccCh
Confidence 45778999999999999999999999765 45667778875321 1122221111 111112
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecCccHHHhhccCEEe
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVL 624 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~gtd~ak~aADivL 624 (875)
+-=....+.+.-..+.+.|+||..+|..|-++|++ .|+++.+.+ ...++.++
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~--~~~~~~~~ 201 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPED--LGDDIVIV 201 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHH--HCSSSEEE
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhh--cccccEEc
Confidence 22122333343344568899999999999999986 445544332 23456555
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.95 E-value=0.068 Score=51.07 Aligned_cols=123 Identities=8% Similarity=0.063 Sum_probs=76.7
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH-
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 570 (875)
.+.|++.+.+++|+ .+..++|+-....+..+-+++|+..... .....+..... .+..|
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~-~~~~~~~~~~~-----------------~~~KP~ 143 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFA-PHIYSAKDLGA-----------------DRVKPK 143 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTT-TCEEEHHHHCT-----------------TCCTTS
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccc-eeecccccccc-----------------cccccC
Confidence 46788888887765 4567899999999999999999864211 11111111000 01223
Q ss_pred -HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEecCcc--------HHHhhccCEEecCCChhHHHHHHH
Q 002832 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT--------DAARSASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 571 -~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg~gt--------d~ak~aADivL~~~~~~~i~~~i~ 637 (875)
+.=....+.+.-..+.+.|+||..+|..+=+.|++- |++..|. +....-||+++ +++..+..++.
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 222344445544456799999999999999999963 4443332 12223489999 55777766654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=92.37 E-value=0.043 Score=54.14 Aligned_cols=34 Identities=9% Similarity=0.143 Sum_probs=27.8
Q ss_pred CChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH
Q 002832 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (875)
Q Consensus 495 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 528 (875)
|++.++|++|+++|++++.+|+....+...++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~ 54 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR 54 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 7899999999999999999998775555555544
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=92.31 E-value=0.071 Score=50.74 Aligned_cols=122 Identities=8% Similarity=0.081 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCHH
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 571 (875)
.+.+++.++++.+++.|+++.++|+-........-+..++.... ..++...+.. ..+-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~~-----------------~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeeee-----------------ccccHHH
Confidence 45789999999999999999999999999888888887774321 1122111110 1112233
Q ss_pred HHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEE-ec---CccHHHhhccCEEecCCChhHHHH
Q 002832 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VA---DATDAARSASDIVLTEPGLSVIIS 634 (875)
Q Consensus 572 ~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVGIa-mg---~gtd~ak~aADivL~~~~~~~i~~ 634 (875)
-=....+.+.-....++|+||..+|..+-++|++--. +. ...+-....+|.++ +++..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 3344455555445579999999999999999997744 32 11222234579887 55777654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=92.26 E-value=0.26 Score=48.24 Aligned_cols=62 Identities=27% Similarity=0.317 Sum_probs=41.1
Q ss_pred HHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc-eEEecCc--c-HHHhh---ccCEEecCCChhHHHHHHH
Q 002832 574 YEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVADA--T-DAARS---ASDIVLTEPGLSVIISAVL 637 (875)
Q Consensus 574 ~~iV~~lq~~g~~Vam~GDG~-NDapALk~AdV-GIamg~g--t-d~ak~---aADivL~~~~~~~i~~~i~ 637 (875)
....+.+.-..+.++|+||.. ||..+-++|++ +|.+.+| + +-... .+|+++ +++..+.++++
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l~ 261 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAVQ 261 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHHC
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHhC
Confidence 344444444456799999996 69999999997 5666433 2 11122 249988 57888887763
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=90.85 E-value=0.17 Score=48.24 Aligned_cols=25 Identities=24% Similarity=0.238 Sum_probs=23.0
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITG 516 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTG 516 (875)
.+-|++.+++++|+++|+++.++|.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 3679999999999999999999995
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.29 E-value=0.08 Score=50.36 Aligned_cols=108 Identities=10% Similarity=0.045 Sum_probs=68.2
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
.++|++.+.+++|+++|+++.++|+- ............|+..-. ..++.+.+. ....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f--d~i~~s~~~-----------------~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF--DFLIESCQV-----------------GMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC--SEEEEHHHH-----------------SCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh--ceeeehhhc-----------------cCCC
Confidence 46799999999999999999999962 233344444555553210 011111000 0112
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecCccHHHhh
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARS 618 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~gtd~ak~ 618 (875)
-.|+--....+.++-...-+.|+||..+|..+-++|++ +|-+.++.+...+
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHH
Confidence 23555566667776666678999999999999999997 5555555554443
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=90.20 E-value=0.31 Score=46.78 Aligned_cols=124 Identities=15% Similarity=0.113 Sum_probs=78.7
Q ss_pred CCCCCChHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEEeCH
Q 002832 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (875)
Q Consensus 491 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar~sP 570 (875)
.++.|++.+++++|+ |+++.++|..+...+...-+..|+... -..++.+++.. ..+-.|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~--fd~v~~s~~~~-----------------~~KP~p 150 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS--FDAVISVDAKR-----------------VFKPHP 150 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT-----------------CCTTSH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc--ccccccccccc-----------------ccCccH
Confidence 356789999999886 778899999999888888888887532 11222222211 011123
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EEec-CccH-HH------------------------hhccCEE
Q 002832 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA-DATD-AA------------------------RSASDIV 623 (875)
Q Consensus 571 ~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdVG-Iamg-~gtd-~a------------------------k~aADiv 623 (875)
+-=...++.+.-+.+-+.|+||..+|..+=++|++- |.+. .+.+ .. ....|++
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~ 230 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEE
Confidence 322344455544445689999999999999999853 2232 1110 00 1247898
Q ss_pred ecCCChhHHHHHHH
Q 002832 624 LTEPGLSVIISAVL 637 (875)
Q Consensus 624 L~~~~~~~i~~~i~ 637 (875)
+ +++..++.+|+
T Consensus 231 i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 231 V--PALGDLPRLVR 242 (245)
T ss_dssp E--SSGGGHHHHHH
T ss_pred E--CCHHHHHHHHH
Confidence 8 67999988875
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.02 E-value=0.082 Score=50.80 Aligned_cols=46 Identities=22% Similarity=0.320 Sum_probs=32.1
Q ss_pred HHHHHHHHHhh-CCCEEEEEcC----CccCHHHHhhCC-ceEEecCccHHHh
Q 002832 572 HKYEIVKRLQA-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAAR 617 (875)
Q Consensus 572 ~K~~iV~~lq~-~g~~Vam~GD----G~NDapALk~Ad-VGIamg~gtd~ak 617 (875)
+|..-++.|.. ..+-|.++|| |-||.+||+.|+ .|+++++..|+-+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~ 236 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR 236 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHH
Confidence 45555555543 3467999999 889999999997 7888887655444
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.80 E-value=0.13 Score=48.63 Aligned_cols=104 Identities=10% Similarity=-0.019 Sum_probs=60.6
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCCCHH----HHHHHHHHhCCCCCCCCCcccccccccccCCcccHHHHhhhCcEEEE
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGDQLA----IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~----tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vfar 567 (875)
++.|++.+.+++|++.|+++.++|+.... .........++... -..++.+.+.. ...
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~--fd~i~~s~~~~-----------------~~K 159 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH--FDFLIESCQVG-----------------MVK 159 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT--SSEEEEHHHHT-----------------CCT
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh--ccEEEeccccc-----------------cch
Confidence 35789999999999999999999975432 22222222232110 01111111000 011
Q ss_pred eCHHHHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEEecCccH
Q 002832 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATD 614 (875)
Q Consensus 568 ~sP~~K~~iV~~lq~~g~~Vam~GDG~NDapALk~AdV-GIamg~gtd 614 (875)
-.|+-=..+.+.+.-...-+.|+||...|..+-++|++ +|.+.++.+
T Consensus 160 P~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 160 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred hHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 12333344455555444567899999999999999998 666655443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=85.13 E-value=0.47 Score=46.11 Aligned_cols=43 Identities=12% Similarity=0.061 Sum_probs=30.6
Q ss_pred CCCCCCChHHHHHHHHhCCCcEEEEcCCC---HHHHHHHHHHhCCC
Q 002832 490 FDPPRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMG 532 (875)
Q Consensus 490 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~ 532 (875)
.+.+=|++.++|+.|+++|++++.+|+.. +....+.=+++|+.
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 34444799999999999999999999544 33333333456764
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=80.52 E-value=0.25 Score=44.93 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=23.5
Q ss_pred CCCCChHHHHHHHHhCCCcEEEEcCC
Q 002832 492 PPRHDSAETIRRALNLGVNVKMITGD 517 (875)
Q Consensus 492 ~lr~~~~~~I~~l~~aGI~v~miTGD 517 (875)
.+-|++.++++.|++.|+++.++|.-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 35689999999999999999999974
|