Citrus Sinensis ID: 002839
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 874 | 2.2.26 [Sep-21-2011] | |||||||
| Q43191 | 862 | Probable linoleate 9S-lip | N/A | no | 0.980 | 0.994 | 0.712 | 0.0 | |
| Q06327 | 859 | Linoleate 9S-lipoxygenase | yes | no | 0.977 | 0.994 | 0.704 | 0.0 | |
| Q41238 | 857 | Linoleate 9S-lipoxygenase | N/A | no | 0.962 | 0.981 | 0.704 | 0.0 | |
| Q43190 | 860 | Probable linoleate 9S-lip | N/A | no | 0.962 | 0.977 | 0.704 | 0.0 | |
| P38415 | 860 | Linoleate 9S-lipoxygenase | N/A | no | 0.962 | 0.977 | 0.701 | 0.0 | |
| O24379 | 861 | Linoleate 9S-lipoxygenase | N/A | no | 0.962 | 0.976 | 0.699 | 0.0 | |
| O22508 | 861 | Probable linoleate 9S-lip | N/A | no | 0.962 | 0.976 | 0.689 | 0.0 | |
| P37831 | 861 | Linoleate 9S-lipoxygenase | N/A | no | 0.962 | 0.976 | 0.691 | 0.0 | |
| Q43189 | 861 | Probable linoleate 9S-lip | N/A | no | 0.962 | 0.976 | 0.692 | 0.0 | |
| O22507 | 861 | Probable linoleate 9S-lip | N/A | no | 0.962 | 0.976 | 0.689 | 0.0 |
| >sp|Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum GN=LOX1.5 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1303 bits (3371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/878 (71%), Positives = 741/878 (84%), Gaps = 21/878 (2%)
Query: 1 MLGHIIDAITCCGDDRDDNNGNKKMKCEKGKCKKIKGTVVLMKKNVLDFNDFNASFLDRF 60
+L I++AI+ R ++NG KK+KGT+VLMKKNVLDFND NAS LD
Sbjct: 2 LLEKIVEAISG----RSEDNG-----------KKVKGTIVLMKKNVLDFNDVNASLLDGV 46
Query: 61 HELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIEGWIPKCTPLAAGESAFNVTFEWD 120
E LG++V+LQLIS VH +P N LQ GK A++E W+ T L AGESAF+VTF+WD
Sbjct: 47 LEFLGKRVSLQLISVVHADPG-NSLQ-GKRSNPAYLEKWLTTGTSLVAGESAFDVTFDWD 104
Query: 121 EDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHFVCNSWVYPAKDYNTDRIFFTNKT 180
EDIGVPGAF+I N H +EFYLK+LTLEDVP G VHFVCNSWVYPAK Y ++RIFF N+
Sbjct: 105 EDIGVPGAFIINNFHFNEFYLKSLTLEDVPNHGNVHFVCNSWVYPAKKYKSERIFFANQA 164
Query: 181 YLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGG 240
YLP +TP PLR YRE+ELVNLRG+ +L+E DRVYDYA YNDLGDP+KGK++ R +LGG
Sbjct: 165 YLPGETPEPLRNYREKELVNLRGNGNGKLEEWDRVYDYALYNDLGDPEKGKQYARTILGG 224
Query: 241 SADYPYPRRGRTGRKLAE-DSKSESRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIA 299
SA+YPYPRRGRTGRK + D KSESR+ ++ SL+IYVPRDERFGH+K+SDFL +ALKSI
Sbjct: 225 SAEYPYPRRGRTGRKPTKADPKSESRIPLLMSLDIYVPRDERFGHIKLSDFLTYALKSIV 284
Query: 300 QVIKPALESL-DSSPNEFDSFDDILKLYEGGIDLPNN-LLDDIRKHIPFEMLKEIFRTDG 357
Q + P ++L DS+P+EFDSF+D+LKLYEGGI LP L + IP E+LKEI RTDG
Sbjct: 285 QFLIPEFQALFDSTPDEFDSFEDVLKLYEGGIKLPQGPFLKALTDSIPLEILKEIIRTDG 344
Query: 358 D-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRS 416
+ KFP PQVI+ED+S+WRTDEEF REMLAG+NPV+I L+EFPP S+L+ E+YGNQ S
Sbjct: 345 EGKFKFPTPQVIQEDKSSWRTDEEFAREMLAGVNPVIISRLQEFPPKSQLDSEVYGNQNS 404
Query: 417 TITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMTYLRRINTTSTKTYASRTILFLKAD 476
TIT+ IEN LDGLT+D+AI+ N+L+IL+HHD LM Y+RRINTT+TK YASRT+LFL+ D
Sbjct: 405 TITKEHIENTLDGLTIDDAIKTNRLYILNHHDILMPYVRRINTTNTKLYASRTLLFLQDD 464
Query: 477 GTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHW 536
GT+KPVAIELSLPHPDGD+ GAVSKVYTP++ GV+GSIWQLAKAYVAVNDSG HQLISHW
Sbjct: 465 GTMKPVAIELSLPHPDGDELGAVSKVYTPADQGVEGSIWQLAKAYVAVNDSGVHQLISHW 524
Query: 537 LNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITVFPG 596
LNTHAAIEPFVIATNRQLSVLHPI+KLLHPHFRDTMNINA ARQILINAGGVLE+TVFP
Sbjct: 525 LNTHAAIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGVLEMTVFPA 584
Query: 597 KYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWAS 656
KYAME+S+ +YKSW FPEQALP DL KRGVAVED +SPHG+RLLI+DYPYAVDGLEIW++
Sbjct: 585 KYAMEMSAVVYKSWVFPEQALPADLIKRGVAVEDSSSPHGVRLLIQDYPYAVDGLEIWSA 644
Query: 657 IKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCT 716
IK WV +YC FYYK+D++V +D+ELQ+WWKELREEGHGDKKDEPWWPKMQ R+EL DSCT
Sbjct: 645 IKSWVTEYCNFYYKSDELVLKDNELQAWWKELREEGHGDKKDEPWWPKMQTRQELKDSCT 704
Query: 717 IIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITA 776
IIIW+ASALHAA+NFGQYPYAGYLPNRPT+SRRFMPE GTPEY+EL++NPDK +LKTIT
Sbjct: 705 IIIWIASALHAAVNFGQYPYAGYLPNRPTLSRRFMPEPGTPEYEELKTNPDKAYLKTITP 764
Query: 777 QLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRN 836
QLQT+LGISLIEILSRH++DE+YLGQRD+ EWT D+ P+ AF+ FGKKL+E+E++II N
Sbjct: 765 QLQTLLGISLIEILSRHASDEIYLGQRDSSEWTKDQEPIAAFERFGKKLSEIEDQIIQMN 824
Query: 837 HNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874
+K KNR GPV +PYTLL PTSE GLTGKGIPNSVSI
Sbjct: 825 GDKKWKNRSGPVNVPYTLLFPTSEQGLTGKGIPNSVSI 862
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Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. May contribute to cell death during the hypersensitive response (HR) by the massive production of free fatty acid hydoperoxides. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Solanum tuberosum (taxid: 4113) EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 5EC: 8 |
| >sp|Q06327|LOX1_ARATH Linoleate 9S-lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q41238|LOX16_SOLTU Linoleate 9S-lipoxygenase 6 (Fragment) OS=Solanum tuberosum GN=LOX1.6 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q43190|LOX14_SOLTU Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum GN=LOX1.4 PE=2 SV=1 | Back alignment and function description |
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| >sp|P38415|LOXA_SOLLC Linoleate 9S-lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O24379|LOX12_SOLTU Linoleate 9S-lipoxygenase 2 OS=Solanum tuberosum GN=LOX1.2 PE=1 SV=1 | Back alignment and function description |
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| >sp|O22508|LOX18_SOLTU Probable linoleate 9S-lipoxygenase 8 OS=Solanum tuberosum GN=LOX1.8 PE=2 SV=1 | Back alignment and function description |
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| >sp|P37831|LOX11_SOLTU Linoleate 9S-lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q43189|LOX13_SOLTU Probable linoleate 9S-lipoxygenase 3 OS=Solanum tuberosum GN=LOX1.3 PE=2 SV=1 | Back alignment and function description |
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| >sp|O22507|LOX17_SOLTU Probable linoleate 9S-lipoxygenase 7 OS=Solanum tuberosum GN=LOX1.7 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 874 | ||||||
| 16904543 | 873 | lipoxygenase [Corylus avellana] | 0.991 | 0.993 | 0.771 | 0.0 | |
| 359487757 | 859 | PREDICTED: probable linoleate 9S-lipoxyg | 0.961 | 0.977 | 0.783 | 0.0 | |
| 224123180 | 871 | predicted protein [Populus trichocarpa] | 0.991 | 0.995 | 0.747 | 0.0 | |
| 268636247 | 859 | lipoxygenase [Vitis vinifera] | 0.961 | 0.977 | 0.780 | 0.0 | |
| 225450913 | 866 | PREDICTED: probable linoleate 9S-lipoxyg | 0.961 | 0.969 | 0.775 | 0.0 | |
| 296088357 | 900 | unnamed protein product [Vitis vinifera] | 0.961 | 0.933 | 0.775 | 0.0 | |
| 255542646 | 871 | lipoxygenase, putative [Ricinus communis | 0.990 | 0.994 | 0.753 | 0.0 | |
| 17129545 | 862 | lipoxygenase [Prunus dulcis] | 0.982 | 0.996 | 0.744 | 0.0 | |
| 224131548 | 847 | predicted protein [Populus trichocarpa] | 0.963 | 0.994 | 0.763 | 0.0 | |
| 208611514 | 861 | lipoxygenase [Camellia sinensis] | 0.971 | 0.986 | 0.755 | 0.0 |
| >gi|16904543|emb|CAD10740.1| lipoxygenase [Corylus avellana] | Back alignment and taxonomy information |
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Score = 1417 bits (3667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/880 (77%), Positives = 782/880 (88%), Gaps = 13/880 (1%)
Query: 1 MLGHIIDAITCCGDDRDDNNGNKKMKCEKG---KCKKIKGTVVLMKKNVLDFNDFNASFL 57
ML +II+A+T GDD +GNKKMK E KC+KI+G+VVLMKKNVLDFNDFNAS L
Sbjct: 1 MLQNIINAVT--GDD----DGNKKMKRETAAAEKCRKIEGSVVLMKKNVLDFNDFNASVL 54
Query: 58 DRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIEGWIPKCTPLAAGESAFNVTF 117
DR HELLG+KV+LQLISAV+ +P+ NGLQ GK+G LA++E WI TPL AGESAF VTF
Sbjct: 55 DRVHELLGQKVSLQLISAVNADPSANGLQ-GKLGNLAYLEHWISTITPLIAGESAFKVTF 113
Query: 118 EWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHFVCNSWVYPAKDYNTDRIFFT 177
+WDEDI +PGAFLIRNNHHSEFYLK+LTLEDVPG+GR+HFVCNSWVYPA Y DR+FF+
Sbjct: 114 DWDEDIAIPGAFLIRNNHHSEFYLKSLTLEDVPGQGRIHFVCNSWVYPADQYKKDRVFFS 173
Query: 178 NKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYDYAYYNDLGDPKKGKKFERPV 237
NKT+LP +TPGPL YRE+ELVNLRGD T ELQE DRVYDYAYYNDLG+P KG K+ RPV
Sbjct: 174 NKTFLPNETPGPLLKYREEELVNLRGDGTGELQEWDRVYDYAYYNDLGNPDKGPKYVRPV 233
Query: 238 LGGSADYPYPRRGRTGRKLAE-DSKSESRLSIVYSLNIYVPRDERFGHLKMSDFLAFALK 296
LGGS++YPYPRRGRTGR +E D SESR+ ++ SLNIYVPRDERFGHLKMSDFLA+ALK
Sbjct: 234 LGGSSEYPYPRRGRTGRPPSETDPNSESRMKLLKSLNIYVPRDERFGHLKMSDFLAYALK 293
Query: 297 SIAQVIKPALESL-DSSPNEFDSFDDILKLYEGGIDLPNNLLDDIRKHIPFEMLKEIFRT 355
++AQ +KP LESL DS+P+EFDS D+LKLYEGG+ LP+ LL +IR+ IP EMLKEIF T
Sbjct: 294 AVAQFLKPELESLFDSTPSEFDSIQDVLKLYEGGVKLPDGLLQNIREDIPAEMLKEIFPT 353
Query: 356 DGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQ 414
+G+ LLK+PMPQVIKED+SAWRTDEEF REMLAG+NPV I L+EFPP SKL+P++YG+Q
Sbjct: 354 EGEGLLKYPMPQVIKEDKSAWRTDEEFGREMLAGVNPVNIRRLQEFPPASKLDPKVYGDQ 413
Query: 415 RSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMTYLRRINTTSTKTYASRTILFLK 474
STIT+ IENN+DGL++DEAI K KLFILDHHD++M YLRRIN+TSTKTYASRTILFLK
Sbjct: 414 ASTITKEHIENNIDGLSIDEAINKKKLFILDHHDAIMPYLRRINSTSTKTYASRTILFLK 473
Query: 475 ADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLIS 534
DGTLKP+ IELSLPHP+GDQ+GA+SKV+TP+E+GV+ SIWQLAKAYVAVNDSG+HQLIS
Sbjct: 474 NDGTLKPLVIELSLPHPEGDQFGAISKVFTPAEEGVESSIWQLAKAYVAVNDSGYHQLIS 533
Query: 535 HWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITVF 594
HWLNTHAAIEPFVIATNRQLSVLHPI+KLLHPHFRDTMNINAFARQILINAGGVLE TVF
Sbjct: 534 HWLNTHAAIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINAFARQILINAGGVLEATVF 593
Query: 595 PGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIW 654
P KY+ME+SS +YK+W FPEQALP DL KRG+AV+D NSPHGLRLLIEDYPYAVDGLEIW
Sbjct: 594 PAKYSMEMSSVVYKNWVFPEQALPADLIKRGMAVKDSNSPHGLRLLIEDYPYAVDGLEIW 653
Query: 655 ASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDS 714
++IK WV+DYC FYYK+DD V+ DSELQSWWKELRE GHGDKKDEPWWPKMQ REEL+++
Sbjct: 654 SAIKTWVEDYCSFYYKSDDRVQNDSELQSWWKELREVGHGDKKDEPWWPKMQTREELVET 713
Query: 715 CTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTI 774
CTIIIW+ASALHAA+NFGQYPYAGYLPNRPT SRRFMPE+GTPEYDEL+S+PDKVFLKTI
Sbjct: 714 CTIIIWIASALHAAVNFGQYPYAGYLPNRPTFSRRFMPEKGTPEYDELKSDPDKVFLKTI 773
Query: 775 TAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIIS 834
TAQLQT+LG+SLIEILS HS+DEVYLGQRDTPEWT D L+AF+ FG+KLA +E++II
Sbjct: 774 TAQLQTLLGVSLIEILSTHSSDEVYLGQRDTPEWTLDAEALEAFERFGQKLAGIEDRIIK 833
Query: 835 RNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874
N++K KNRVGPVK+PYTLL PTSEGG+TGKGIPNSVSI
Sbjct: 834 MNNDKKWKNRVGPVKVPYTLLYPTSEGGITGKGIPNSVSI 873
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Source: Corylus avellana Species: Corylus avellana Genus: Corylus Family: Betulaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487757|ref|XP_002284535.2| PREDICTED: probable linoleate 9S-lipoxygenase 5 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224123180|ref|XP_002319014.1| predicted protein [Populus trichocarpa] gi|222857390|gb|EEE94937.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|268636247|gb|ACZ17392.1| lipoxygenase [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225450913|ref|XP_002280651.1| PREDICTED: probable linoleate 9S-lipoxygenase 5-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296088357|emb|CBI36802.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255542646|ref|XP_002512386.1| lipoxygenase, putative [Ricinus communis] gi|223548347|gb|EEF49838.1| lipoxygenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|17129545|emb|CAD10779.2| lipoxygenase [Prunus dulcis] | Back alignment and taxonomy information |
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| >gi|224131548|ref|XP_002328567.1| predicted protein [Populus trichocarpa] gi|222838282|gb|EEE76647.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|208611514|gb|ABW75772.2| lipoxygenase [Camellia sinensis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 874 | ||||||
| TAIR|locus:2011030 | 859 | LOX1 "lipoxygenase 1" [Arabido | 0.950 | 0.967 | 0.724 | 0.0 | |
| TAIR|locus:2087837 | 886 | LOX5 [Arabidopsis thaliana (ta | 0.953 | 0.940 | 0.649 | 3.7e-309 | |
| UNIPROTKB|P29250 | 870 | LOX1.1 "Linoleate 9S-lipoxygen | 0.950 | 0.955 | 0.582 | 1.8e-270 | |
| TAIR|locus:2018848 | 919 | LOX3 "lipoxygenase 3" [Arabido | 0.942 | 0.896 | 0.447 | 1.5e-193 | |
| TAIR|locus:2030215 | 926 | LOX4 "lipoxygenase 4" [Arabido | 0.938 | 0.885 | 0.443 | 1.7e-192 | |
| TAIR|locus:2096915 | 896 | LOX2 "lipoxygenase 2" [Arabido | 0.863 | 0.842 | 0.467 | 2.9e-183 | |
| UNIPROTKB|P38419 | 924 | CM-LOX1 "Lipoxygenase 7, chlor | 0.906 | 0.857 | 0.455 | 1e-180 | |
| TAIR|locus:2008808 | 917 | LOX6 "lipoxygenase 6" [Arabido | 0.917 | 0.874 | 0.437 | 6.1e-174 | |
| ZFIN|ZDB-GENE-060623-19 | 676 | zgc:136911 "zgc:136911" [Danio | 0.526 | 0.680 | 0.311 | 2e-52 | |
| ZFIN|ZDB-GENE-050522-330 | 676 | zgc:110251 "zgc:110251" [Danio | 0.558 | 0.721 | 0.3 | 4.4e-50 |
| TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3267 (1155.1 bits), Expect = 0., P = 0.
Identities = 610/842 (72%), Positives = 724/842 (85%)
Query: 38 TVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIE 97
TVVLMKKNVLDFNDFNASFLDR HE LG K+TL+L+S+ + +ENG + GK+GK AH+E
Sbjct: 24 TVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTD-SENGSK-GKLGKAAHLE 81
Query: 98 GWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHF 157
WI T L AGESAF VTF+++ D G PGAFLIRN+H SEF LK+LTLEDVPG GRVH+
Sbjct: 82 DWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRVHY 141
Query: 158 VCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYD 217
+CNSW+YPAK Y TDR+FF+NKTYLP +TP L YRE+ELV+LRG EL+E DRVYD
Sbjct: 142 ICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEELVSLRGTGEGELKEWDRVYD 201
Query: 218 YAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRK-LAEDSKSESRLSIVYSLNIYV 276
YAYYNDLG P K RPVLGG+ +YPYPRRGRTGRK ED ++ESRL I SL+IYV
Sbjct: 202 YAYYNDLGVPPKNP---RPVLGGTQEYPYPRRGRTGRKPTKEDPQTESRLPITSSLDIYV 258
Query: 277 PRDERFGHLKMSDFLAFALKSIAQVIKPALESL-DSSPNEFDSFDDILKLYEGGIDLPNN 335
PRDERFGHLKMSDFLA+ALK+IAQ I+PALE++ D +P EFDSF+D+LK+YE GIDLPN
Sbjct: 259 PRDERFGHLKMSDFLAYALKAIAQFIQPALEAVFDDTPKEFDSFEDVLKIYEEGIDLPNQ 318
Query: 336 -LLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVV 393
L+D I K+IP EMLKEIFRTDG LKFP+PQVIKED++AWRTDEEF REMLAGLNPVV
Sbjct: 319 ALIDSIVKNIPLEMLKEIFRTDGQKFLKFPVPQVIKEDKTAWRTDEEFAREMLAGLNPVV 378
Query: 394 ICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMTY 453
I LKEFPP SKL+ E YGNQ STIT++ IE+NLDGLTV+EA+EK +LFILDHHD+LM Y
Sbjct: 379 IQLLKEFPPKSKLDSESYGNQNSTITKSHIEHNLDGLTVEEALEKERLFILDHHDTLMPY 438
Query: 454 LRRINTTSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGS 513
L R+NTT+TKTYASRT+LFLK DGTLKP+ IELSLPHP+GD++GAVS+VYTP E GV S
Sbjct: 439 LGRVNTTTTKTYASRTLLFLKDDGTLKPLVIELSLPHPNGDKFGAVSEVYTPGE-GVYDS 497
Query: 514 IWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMN 573
+WQLAKA+V VNDSG+HQLISHW+ THA+IEPFVIATNRQLSVLHP++KLL PHFRDTMN
Sbjct: 498 LWQLAKAFVGVNDSGNHQLISHWMQTHASIEPFVIATNRQLSVLHPVFKLLEPHFRDTMN 557
Query: 574 INAFARQILINAGGVLEITVFPGKYAMELSSALYKS-WSFPEQALPEDLKKRGVAVEDPN 632
INA ARQILIN GG+ EITVFP KYAME+SS +YK+ W+FP+QALP +LKKRG+AVEDP
Sbjct: 558 INALARQILINGGGIFEITVFPSKYAMEMSSFIYKNHWTFPDQALPAELKKRGMAVEDPE 617
Query: 633 SPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEG 692
+PHGLRL I+DYPYAVDGLE+W +I+ WV+DY + +YK ++ ++ D+ELQ+WWKE+REEG
Sbjct: 618 APHGLRLRIKDYPYAVDGLEVWYAIESWVRDYIFLFYKIEEDIQTDTELQAWWKEVREEG 677
Query: 693 HGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMP 752
HGDKK EPWWPKMQ REEL++SCTIIIWVASALHAA+NFGQYP AGYLPNRPTISR++MP
Sbjct: 678 HGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVAGYLPNRPTISRQYMP 737
Query: 753 EEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDE 812
+E TPE++ELE NPDKVFLKTITAQLQT+LGISLIEILS HS+DEVYLGQRD+ EW +++
Sbjct: 738 KENTPEFEELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKEWAAEK 797
Query: 813 APLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSV 872
L+AF++FG+K+ E+E+ I RN ++ LKNR G VKMPYTLL P+SEGG+TG+GIPNSV
Sbjct: 798 EALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSV 857
Query: 873 SI 874
SI
Sbjct: 858 SI 859
|
|
| TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060623-19 zgc:136911 "zgc:136911" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050522-330 zgc:110251 "zgc:110251" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q7G794 | LOX3_ORYSJ | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.5781 | 0.9736 | 0.9826 | yes | no |
| Q53RB0 | LOX4_ORYSJ | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.6092 | 0.9656 | 0.9623 | yes | no |
| P14856 | LOX2_PEA | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.5967 | 0.9496 | 0.9606 | N/A | no |
| Q43189 | LOX13_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.6922 | 0.9622 | 0.9767 | N/A | no |
| O22508 | LOX18_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.6898 | 0.9622 | 0.9767 | N/A | no |
| O22507 | LOX17_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.6898 | 0.9622 | 0.9767 | N/A | no |
| Q41238 | LOX16_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.7048 | 0.9622 | 0.9813 | N/A | no |
| P29114 | LOX1_HORVU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.5590 | 0.9679 | 0.9814 | N/A | no |
| P27481 | LOXB_PHAVU | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.608 | 0.8409 | 0.9919 | N/A | no |
| P27480 | LOXA_PHAVU | 1, ., 1, 3, ., 1, 1, ., 1, 2 | 0.5816 | 0.9496 | 0.9628 | N/A | no |
| Q43190 | LOX14_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.7048 | 0.9622 | 0.9779 | N/A | no |
| Q43191 | LOX15_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.7129 | 0.9805 | 0.9941 | N/A | no |
| P37831 | LOX11_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.6910 | 0.9622 | 0.9767 | N/A | no |
| P09918 | LOX3_PEA | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.6095 | 0.9519 | 0.9663 | N/A | no |
| O24379 | LOX12_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.6992 | 0.9622 | 0.9767 | N/A | no |
| Q06327 | LOX1_ARATH | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.7042 | 0.9771 | 0.9941 | yes | no |
| P38416 | LOXB_SOLLC | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.6439 | 0.9736 | 0.9906 | N/A | no |
| P38414 | LOX1_LENCU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.5688 | 0.9530 | 0.9618 | N/A | no |
| P38415 | LOXA_SOLLC | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.7012 | 0.9622 | 0.9779 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.13.11 | 0.691 |
| 3rd Layer | 1.13.11.12 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
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 |
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 |
 |
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 | Lox | RecName- Full=Lipoxygenase; EC=1.13.11.12;; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity) (859 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | HPLA | • | • | 0.913 | |||||||
 | GSVIVG00025319001 | • | 0.899 | ||||||||
 | GSVIVG00020785001 | • | 0.899 | ||||||||
 | GSVIVG00020782001 | • | 0.899 | ||||||||
 | GSVIVG00019084001 | • | 0.899 | ||||||||
 | GSVIVG00014710001 | • | 0.899 | ||||||||
 | GSVIVG00001547001 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 874 | |||
| PLN02337 | 866 | PLN02337, PLN02337, lipoxygenase | 0.0 | |
| pfam00305 | 667 | pfam00305, Lipoxygenase, Lipoxygenase | 0.0 | |
| PLN02264 | 919 | PLN02264, PLN02264, lipoxygenase | 0.0 | |
| PLN02305 | 918 | PLN02305, PLN02305, lipoxygenase | 0.0 | |
| cd01751 | 137 | cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox | 2e-52 | |
| smart00308 | 105 | smart00308, LH2, Lipoxygenase homology 2 (beta bar | 8e-31 | |
| pfam01477 | 115 | pfam01477, PLAT, PLAT/LH2 domain | 1e-21 | |
| cd00113 | 116 | cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, A | 3e-07 |
| >gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase | Back alignment and domain information |
|---|
Score = 1697 bits (4397), Expect = 0.0
Identities = 673/883 (76%), Positives = 762/883 (86%), Gaps = 26/883 (2%)
Query: 1 MLGHIIDAITCCGDDRDDNNGNKKMKCEKGKCKKIKGTVVLMKKNVLDFNDFNASFLDRF 60
MLG IIDAIT NN KK K IKGTVVLMKKNVLDFNDFNAS LDR
Sbjct: 1 MLGGIIDAITGS------NNKTKKEK--------IKGTVVLMKKNVLDFNDFNASVLDRV 46
Query: 61 HELLGRKVTLQLISAVHGEPAENGLQAGKIGKLAHIEGWIPKCTPLAAGESAFNVTFEWD 120
HELLG+ V+LQLIS+ +P ENGL+ GK+GK A++E WI T L AGESAF VTF+WD
Sbjct: 47 HELLGKGVSLQLISSTVVDP-ENGLR-GKLGKEAYLEKWITTITSLTAGESAFKVTFDWD 104
Query: 121 EDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHFVCNSWVYPAKDYNTDRIFFTNKT 180
E IGVPGAF+I+NNHHSEFYLKT+TLEDVPG GRVHFVCNSW+YPAK Y DR+FF+NKT
Sbjct: 105 EKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKT 164
Query: 181 YLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGG 240
YLP+QTP PLR YRE+ELVNLRGD EL+E DRVYDY YYNDLGDP KG + RPVLGG
Sbjct: 165 YLPSQTPAPLRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGG 224
Query: 241 SADYPYPRRGRTGRKLAE-DSKSESRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIA 299
S +YPYPRRGRTGRK + D SESRL ++ SLNIYVPRDERFGHLKMSDFLA+ALK+IA
Sbjct: 225 SQEYPYPRRGRTGRKPTKTDPNSESRLPLL-SLNIYVPRDERFGHLKMSDFLAYALKAIA 283
Query: 300 QVIKPALESL-DSSPNEFDSFDDILKLYEGGIDLPNN-LLDDIRKHIPFEMLKEIFRTDG 357
QV+ P LE+L D +PNEFDSF+D+LKLYEGGI LPN LL+++RK+IP EMLKE+ RTDG
Sbjct: 284 QVLVPELEALFDKTPNEFDSFEDVLKLYEGGIKLPNGPLLEELRKNIPLEMLKELLRTDG 343
Query: 358 D-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRS 416
+ LLKFPMPQVIKED+SAWRTDEEF REMLAG+NPVVI L EFPP SKL+P+ YG+Q S
Sbjct: 344 EYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNS 403
Query: 417 TITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMTYLRRINTTSTKTYASRTILFLKAD 476
+IT+ IE NL+GLTV EA+EKN+LFILDHHD+LM YLRRIN+TSTKTYA+RT+LFLK D
Sbjct: 404 SITEEHIEKNLEGLTVQEALEKNRLFILDHHDALMPYLRRINSTSTKTYATRTLLFLKDD 463
Query: 477 GTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHW 536
GTLKP+AIELSLPHP GD++GAVSKVYTP+EDGV+GS+WQLAKAYVAVNDSG+HQLISHW
Sbjct: 464 GTLKPLAIELSLPHPQGDKFGAVSKVYTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHW 523
Query: 537 LNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITVFPG 596
LNTHA IEPFVIATNRQLSVLHPI+KLLHPHFRDTMNINA ARQILINAGG+LE TVFPG
Sbjct: 524 LNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGILESTVFPG 583
Query: 597 KYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWAS 656
KYA+E+SS +YK+W+F EQALP DL KRGVAVEDP+SPHG+RLLIEDYPYAVDGLEIW++
Sbjct: 584 KYALEMSSVVYKNWNFTEQALPADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSA 643
Query: 657 IKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCT 716
I+ WV++YC FYY DDMV+ D+ELQSWWKE+REEGHGD KDEPWWPKMQ ELI+SCT
Sbjct: 644 IETWVKEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCT 703
Query: 717 IIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITA 776
IIIW+ASALHAA+NFGQYPYAGYLPNRPT+SRRFMPE GTPEY+ELE NPDK FLKTITA
Sbjct: 704 IIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYEELEKNPDKAFLKTITA 763
Query: 777 QLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRN 836
QLQT+LGISLIEILSRHS+DEVYLGQRDTPEWTSD PL+AF FG++L E+E +I+ N
Sbjct: 764 QLQTLLGISLIEILSRHSSDEVYLGQRDTPEWTSDAEPLEAFKRFGERLVEIENRIVDMN 823
Query: 837 HNKNLKNRVGPVKMPYTLLVPTS-----EGGLTGKGIPNSVSI 874
+ LKNRVGPVKMPYTLL P + EGGLTGKGIPNSVSI
Sbjct: 824 KDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866
|
Length = 866 |
| >gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain | Back alignment and domain information |
|---|
| >gnl|CDD|238061 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 874 | |||
| PLN02337 | 866 | lipoxygenase | 100.0 | |
| PLN02305 | 918 | lipoxygenase | 100.0 | |
| PLN02264 | 919 | lipoxygenase | 100.0 | |
| PF00305 | 667 | Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li | 100.0 | |
| cd01751 | 137 | PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re | 100.0 | |
| smart00308 | 105 | LH2 Lipoxygenase homology 2 (beta barrel) domain. | 99.11 | |
| PF01477 | 113 | PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg | 98.85 | |
| cd00113 | 116 | PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin | 98.53 | |
| cd02899 | 109 | PLAT_SR Scavenger receptor protein. A subfamily of | 98.18 | |
| cd01753 | 113 | PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u | 97.87 | |
| cd01756 | 120 | PLAT_repeat PLAT/LH2 domain repeats of family of p | 97.71 | |
| cd01757 | 114 | PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter | 97.66 | |
| cd01752 | 120 | PLAT_polycystin PLAT/LH2 domain of polycystin-1 li | 97.5 | |
| cd01754 | 129 | PLAT_plant_stress PLAT/LH2 domain of plant-specifi | 97.45 |
| >PLN02337 lipoxygenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-265 Score=2289.60 Aligned_cols=857 Identities=78% Similarity=1.300 Sum_probs=824.3
Q ss_pred CcccchhhhhccCCCCCCCCCCcccccccCceeeeeEEEEEEeeccccccccccchhhhHhhhcCCeEEEEEeecccCCC
Q 002839 1 MLGHIIDAITCCGDDRDDNNGNKKMKCEKGKCKKIKGTVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEP 80 (874)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~l~lvS~~~~~~ 80 (874)
|++++++.++ |.+. .++ ..+|||+||+|+|+++|++++.++++|.++|++||+|+|||||++++||
T Consensus 1 ~~~~~~~~~~--~~~~----~~~--------~~~~~~~v~l~~k~~ld~~~~~~~~lD~~~~l~G~~v~lqLvS~~~~~p 66 (866)
T PLN02337 1 MLGGIIDAIT--GSNN----KTK--------KEKIKGTVVLMKKNVLDFNDFNASVLDRVHELLGKGVSLQLISSTVVDP 66 (866)
T ss_pred CcccccHhhh--cCCc----cCc--------cceEEEEEEEEEecccchhhcccchhhhHHHhcCCeEEEEEEecccccc
Confidence 7788888877 5321 111 1489999999999999999999999999999999999999999999887
Q ss_pred CcCCCcCcccCcccccccccccCCCCCCCceEEEEEeecCCCCCCceeEEeecCCCCceeEeEEEEeecCCCceEEEeec
Q 002839 81 AENGLQAGKIGKLAHIEGWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHFVCN 160 (874)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~~~e~fl~~i~l~~~p~~~~~~F~c~ 160 (874)
+||+ +||+|++++|++|+++.+...+++++|+|+|+||++||+||||+|+|.|++||||++|+|+++|++++|||+||
T Consensus 67 -~~g~-~gk~~k~a~l~~w~~~~~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cn 144 (866)
T PLN02337 67 -ENGL-RGKLGKEAYLEKWITTITSLTAGESAFKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCN 144 (866)
T ss_pred -ccCC-ccccCCccchhhhccCCCCCCCCceEEEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecC
Confidence 5886 99999999999999876666778889999999999999999999999999999999999999998899999999
Q ss_pred ccccCCCCCCcceeeecCceeccCCCCchhhHhHHHHHHHhhCCCcccccccCceeecccccCCCCCCCCCCcccccCCC
Q 002839 161 SWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGG 240 (874)
Q Consensus 161 sWv~~~~~~~~~r~ff~n~~yLp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~Pd~~~~~~rpvlgg 240 (874)
|||||+++++.+||||+||+|||++||++|+++||+||++|||||+||||+||||||||+|||||+||++++++||||||
T Consensus 145 SWV~~~~~~~~~RiFF~nk~ylp~~tP~~l~~~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg 224 (866)
T PLN02337 145 SWIYPAKRYRYDRVFFSNKTYLPSQTPAPLRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGG 224 (866)
T ss_pred CccccCCCCCCCceEecCCCcCcccccHHHHHHHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCC-CCCCCchhhhccccCccccCCCCccCcccccchHHHHHHHHHHhhhhhhhcc-CCCCCCCCC
Q 002839 241 SADYPYPRRGRTGRKLA-EDSKSESRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQVIKPALESL-DSSPNEFDS 318 (874)
Q Consensus 241 s~~~pyprr~rtgr~~~-~d~~~e~r~~~~~~~~~yvPrDe~F~~~K~~~f~~~~~~~~~~~~~p~l~~~-~~~~~~f~s 318 (874)
|++|||||||||||||+ +||.+|||.+.. +..+||||||+|++.|+++|+++++||++|.++|.|+++ +.+..+|++
T Consensus 225 ~~~~pyPRR~rTgr~~t~~dp~~esr~~~~-~~~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~ 303 (866)
T PLN02337 225 SQEYPYPRRGRTGRKPTKTDPNSESRLPLL-SLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDS 303 (866)
T ss_pred CCCCCCCCcccCCCCCCCCCCccccccccC-CCCcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999 999999997543 235899999999999999999999999999999999987 666899999
Q ss_pred HHHHHHhhcCCCCCCCC-chhhhhcccchhhHHHhhhcCCC-cccCCCchhhhhcccccCCcHHHHHHHhhCCCcccccc
Q 002839 319 FDDILKLYEGGIDLPNN-LLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVICC 396 (874)
Q Consensus 319 f~di~~ly~~~~~~p~~-~~~~~~~~~p~~~~~~~~~~~~~-~~k~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r 396 (874)
|+||++||++|+++|.+ ..+.+++.+|++++|++++++++ ++|||+|+||++|+++|++|+|||||||||+||++|+|
T Consensus 304 f~~i~~ly~~g~~lp~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~r 383 (866)
T PLN02337 304 FEDVLKLYEGGIKLPNGPLLEELRKNIPLEMLKELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRR 383 (866)
T ss_pred HHHHHHHhhcCCCCCCchHHHHhhhcChHHHHHHHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheee
Confidence 99999999999999975 45678888999999999998888 99999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCcccchhhHhhcCCCCCHHHHHhcCCEEEecccchhhhhhhcccCCCCccccceeEEeecCC
Q 002839 397 LKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMTYLRRINTTSTKTYASRTILFLKAD 476 (874)
Q Consensus 397 ~~~~P~~s~ld~~~yg~~~s~it~e~i~~~l~G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~~yA~~~Lffl~~d 476 (874)
|++||++|+|||++||+++|+||++||++.|+|+||+|||++|||||+||||.+|||+.++|...+++|||+||||++++
T Consensus 384 l~~~P~~~~ld~~~yg~~~s~iT~e~v~~~L~g~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k~yA~~tLffl~~d 463 (866)
T PLN02337 384 LTEFPPKSKLDPKKYGDQNSSITEEHIEKNLEGLTVQEALEKNRLFILDHHDALMPYLRRINSTSTKTYATRTLLFLKDD 463 (866)
T ss_pred cccCCCcccCChhhcCCccCccCHHHHHhccCCccHHHHHHcCCEEEEecchhcCcccccccCCCCccccceeEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred CceeeEEEEecCCCCCCCCCCCCCeeecCCCCCCCCchhHHHHHHHHhhhhhhhHHHHHHhhhhhhhhHHHHHHhccCCC
Q 002839 477 GTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSV 556 (874)
Q Consensus 477 g~L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~ 556 (874)
|+|+||||||++|++.++++++.++||||+++++++|.|+|||+||++||+++||+|+||++||+++|||+|||+||||+
T Consensus 464 G~L~PlAIqL~~p~~~~~~~g~~~~VfTP~~~~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~ 543 (866)
T PLN02337 464 GTLKPLAIELSLPHPQGDKFGAVSKVYTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSV 543 (866)
T ss_pred CCEeEEEEEeccCCCCcccCCCCCCeECCCCCCCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCC
Confidence 99999999999998877777889999999987777999999999999999999999999999999999999999999999
Q ss_pred cCchhhcccccccchhchhHHHHHhcccCCceeeeeecChhhHHHHHHHHHcCCCCCCCCCchhHHhcCCCCCCCCCCcc
Q 002839 557 LHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHG 636 (874)
Q Consensus 557 ~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gG~id~~~~~g~~~~elss~~yk~w~f~~~~lP~DL~~RG~~~~D~~~~~g 636 (874)
+|||||||.||||+||+||++||+.||++||++|+++++|+++|||++++|++|+|++++||+||++|||+++|+++|||
T Consensus 544 ~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiid~~~~~g~~~~els~~~yk~w~F~~~~LP~DL~~RGv~~~D~~~p~g 623 (866)
T PLN02337 544 LHPIHKLLHPHFRDTMNINALARQILINAGGILESTVFPGKYALEMSSVVYKNWNFTEQALPADLIKRGVAVEDPSSPHG 623 (866)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHheeCCCCeeeeeeccchhHHHHHHHHHhcCCcccccCHHHHHHcCCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhchhhcCCCccccCChHHHHHHHHHHhccCCCCCCCCCCCCCCChHHHHHHHh
Q 002839 637 LRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCT 716 (874)
Q Consensus 637 l~l~l~dYpYrdDgL~IW~AI~~fV~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~P~l~T~~eLv~~lT 716 (874)
+++.|||||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++|||++++++|||+|+|+++||++||
T Consensus 624 ~~l~i~dYPYrdDGL~iW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~p~l~T~~eLv~~lT 703 (866)
T PLN02337 624 VRLLIEDYPYAVDGLEIWSAIETWVKEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCT 703 (866)
T ss_pred cccccCCCcchhhHHHHHHHHHHHHHHHHHhhCCchHhhccCHHHHHHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccchhhhhccCCcccccccCCCcccccCCCCCCCCchhhhcccCchHHHHhhcCcHHHHHHHHHHHHHhccCCCC
Q 002839 717 IIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTD 796 (874)
Q Consensus 717 ~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~~g~~~~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~lLS~h~~d 796 (874)
+|||+|||||||||||||+|+||+||+|++||+|||++++++|.+|..+||+++|++||++.||+.+|+++++||+|++|
T Consensus 704 ~iIf~aSaqHAAVNfgQy~y~gfvPN~P~~~r~~~P~~~~~e~~~l~~~~e~~~L~tlp~~~qt~~~~~l~~lLS~~s~d 783 (866)
T PLN02337 704 IIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYEELEKNPDKAFLKTITAQLQTLLGISLIEILSRHSSD 783 (866)
T ss_pred hhhhhcchhhhhhhcCCcccccccCCCchhhcCCCCCCCchhhhhhccCcHHHHHHhCCCHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred ccccCCcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCccccCCCCcCcccccccCC-----CCCCCcCccCcc
Q 002839 797 EVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTS-----EGGLTGKGIPNS 871 (874)
Q Consensus 797 e~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss-----~~g~t~~~IPnS 871 (874)
|+|||+|++..|+.|+++++|+++|+++|++||++|++||++++||||+||+++||+||+|++ ++||||||||||
T Consensus 784 e~yLG~~~~~~w~~d~~~~~a~~~F~~~L~eIe~~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~~~~~g~t~~gIPNS 863 (866)
T PLN02337 784 EVYLGQRDTPEWTSDAEPLEAFKRFGERLVEIENRIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNS 863 (866)
T ss_pred ceeccCcCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcccCCCCCCceeeCCCCccccCCCCcccCCCCCc
Confidence 999999988899999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred ccC
Q 002839 872 VSI 874 (874)
Q Consensus 872 IsI 874 (874)
|||
T Consensus 864 ISI 866 (866)
T PLN02337 864 VSI 866 (866)
T ss_pred ccC
Confidence 998
|
|
| >PLN02305 lipoxygenase | Back alignment and domain information |
|---|
| >PLN02264 lipoxygenase | Back alignment and domain information |
|---|
| >PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain | Back alignment and domain information |
|---|
| >cd02899 PLAT_SR Scavenger receptor protein | Back alignment and domain information |
|---|
| >cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase | Back alignment and domain information |
|---|
| >cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function | Back alignment and domain information |
|---|
| >cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family | Back alignment and domain information |
|---|
| >cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins | Back alignment and domain information |
|---|
| >cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 874 | ||||
| 1ik3_A | 857 | Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope | 0.0 | ||
| 1rov_A | 857 | Lipoxygenase-3 Treated With Cumene Hydroperoxide Le | 0.0 | ||
| 2iuj_A | 853 | Crystal Structure Of Soybean Lipoxygenase-B Length | 0.0 | ||
| 3bnb_A | 839 | Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | 0.0 | ||
| 2sbl_B | 839 | The Three-Dimensional Structure Of An Arachidonic A | 0.0 | ||
| 3pzw_A | 839 | Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | 0.0 | ||
| 3bnd_A | 839 | Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | 0.0 | ||
| 1fgr_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng | 0.0 | ||
| 1fgq_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng | 0.0 | ||
| 3bne_A | 839 | Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | 0.0 | ||
| 1fgm_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng | 0.0 | ||
| 3bnc_A | 839 | Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | 0.0 | ||
| 1y4k_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng | 0.0 | ||
| 1fgt_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng | 0.0 | ||
| 1fgo_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng | 0.0 | ||
| 2iuk_A | 864 | Crystal Structure Of Soybean Lipoxygenase-D Length | 0.0 | ||
| 3vf1_A | 698 | Structure Of A Calcium-Dependent 11r-Lipoxygenase S | 9e-51 | ||
| 3dy5_A | 1066 | Allene Oxide Synthase 8r-Lipoxygenase From Plexaura | 1e-48 | ||
| 3fg1_A | 696 | Crystal Structure Of Delta413-417:gs Lox Length = 6 | 2e-48 | ||
| 2fnq_A | 699 | Insights From The X-Ray Crystal Structure Of Coral | 5e-48 | ||
| 3fg4_A | 696 | Crystal Structure Of Delta413-417:gs I805a Lox Leng | 9e-48 | ||
| 3fg3_A | 696 | Crystal Structure Of Delta413-417:gs I805w Lox Leng | 1e-47 | ||
| 3v92_B | 691 | S663a Stable-5-Lox Length = 691 | 2e-43 | ||
| 3o8y_A | 691 | Stable-5-Lipoxygenase Length = 691 | 3e-43 | ||
| 3v98_A | 691 | S663d Stable-5-Lox Length = 691 | 5e-43 | ||
| 3rde_A | 573 | Crystal Structure Of The Catalytic Domain Of Porcin | 5e-43 | ||
| 3d3l_A | 541 | The 2.6 A Crystal Structure Of The Lipoxygenase Dom | 6e-39 | ||
| 1lox_A | 662 | Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | 1e-36 | ||
| 2p0m_A | 662 | Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy | 1e-36 |
| >pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 | Back alignment and structure |
|
| >pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 | Back alignment and structure |
| >pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 | Back alignment and structure |
| >pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | Back alignment and structure |
| >pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 | Back alignment and structure |
| >pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | Back alignment and structure |
| >pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 | Back alignment and structure |
| >pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 | Back alignment and structure |
| >pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | Back alignment and structure |
| >pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 | Back alignment and structure |
| >pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 | Back alignment and structure |
| >pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 | Back alignment and structure |
| >pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 | Back alignment and structure |
| >pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 | Back alignment and structure |
| >pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 | Back alignment and structure |
| >pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 | Back alignment and structure |
| >pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 | Back alignment and structure |
| >pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 | Back alignment and structure |
| >pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 | Back alignment and structure |
| >pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp Target) Length = 541 | Back alignment and structure |
| >pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | Back alignment and structure |
| >pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 | Back alignment and structure |
|---|
Score = 1047 bits (2709), Expect = 0.0
Identities = 499/851 (58%), Positives = 633/851 (74%), Gaps = 22/851 (2%)
Query: 31 KCKKIKGTVVLMKKNVLDFNDFNASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKI 90
KIKGTVVLM KN L+ N S +D + LGR V+LQLISA + G K+
Sbjct: 4 AGHKIKGTVVLMPKNELEVNPD-GSAVDNLNAFLGRSVSLQLISATKADAHGKG----KV 58
Query: 91 GKLAHIEGWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVP 150
GK +EG L AGESAFN+ FEWD +G+PGAF I+N EF+LK+LTLE +
Sbjct: 59 GKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAIS 118
Query: 151 GEGRVHFVCNSWVYPAKDYNTDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQ 210
+G + FVCNSWVY K Y + RIFF N TY+P++TP PL YRE+EL +LRG+ T E +
Sbjct: 119 NQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERK 178
Query: 211 EHDRVYDYAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRKLAE-DSKSESRLSIV 269
E+DR+YDY YNDLG+P K +K RPVLGGS+ +PYPRRGRTGR D +E +
Sbjct: 179 EYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGE-- 236
Query: 270 YSLNIYVPRDERFGHLKMSDFLAFALKSIAQVIKPALESL---DSSPNEFDSFDDILKLY 326
YVPRDE GHLK D L KS++Q+++PA ES S+P EF SF D+ LY
Sbjct: 237 ---VFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY 293
Query: 327 EGGIDLPNNLLDDIRKHIPFEMLKEIFRTDG-DLLKFPMPQVIKEDESAWRTDEEFTREM 385
EGGI LP +++ IP ++KE++RTDG +LKFP P V++ +SAW TDEEF REM
Sbjct: 294 EGGIKLPRDVI---STIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREM 350
Query: 386 LAGLNPVVICCLKEFPPTSKLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILD 445
+AG+NP VI L+EFPP S L+P +YG+Q S IT + ++ LDG T+DEA+ +LF+LD
Sbjct: 351 IAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLD 408
Query: 446 HHDSLMTYLRRINT-TSTKTYASRTILFLKADGTLKPVAIELSLPHPDGDQYGAVSKVYT 504
+HD M Y+R+IN S KTYA+RTILFL+ DGTLKPVAIELSLPH GD AVS+V
Sbjct: 409 YHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVL 468
Query: 505 PSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLL 564
P+++GV+ +IW LAKAYV VNDS +HQL+SHWLNTHAA+EPFVIAT+R LSVLHPIYKLL
Sbjct: 469 PAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLL 528
Query: 565 HPHFRDTMNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKR 624
PH+R+ MNINA ARQ LINA G++E T P KY++E+SSA+YK+W F +QALP DL KR
Sbjct: 529 TPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKR 588
Query: 625 GVAVEDPNSPHGLRLLIEDYPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSW 684
GVA++DP++PHG+RLLIEDYPYA DGLEIWA+IK WVQ+Y YY DD VK DSELQ W
Sbjct: 589 GVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHW 648
Query: 685 WKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYPYAGYLPNRP 744
WKE E+GHGD KD+PWWPK+Q E+L++ C IIIW+ASALHAA+NFGQYPY G + NRP
Sbjct: 649 WKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRP 708
Query: 745 TISRRFMPEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRD 804
T SRR +PE+GTPEY+E+ +N +K +L+TIT++L T++ +S+IEILS H++DEVYLGQRD
Sbjct: 709 TASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRD 768
Query: 805 TPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGL 863
P WTSD LQAF +FG KL E+EEK++ RN++ +L+ NR+GPV++PYTLL P+SE GL
Sbjct: 769 NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGL 828
Query: 864 TGKGIPNSVSI 874
T +GIPNS+SI
Sbjct: 829 TFRGIPNSISI 839
|
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 | Back alignment and structure |
|---|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 874 | |||
| 2iuk_A | 864 | SEED lipoxygenase; iron, dioxygenase, metal-bindin | 100.0 | |
| 2iuj_A | 853 | Lipoxygenase L-5; dioxygenase, metal-binding, oxid | 100.0 | |
| 1f8n_A | 839 | Lipoxygenase-1; dioxygenase, metalloprotein, fatty | 100.0 | |
| 1lox_A | 662 | 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot | 100.0 | |
| 3v98_A | 691 | Arachidonate 5-lipoxygenase; dioxygenase, oxidored | 100.0 | |
| 3fg1_A | 696 | Allene oxide synthase-lipoxygenase protein; arichi | 100.0 | |
| 3vf1_A | 698 | 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik | 100.0 | |
| 3dy5_A | 1066 | Allene oxide synthase-lipoxygenase protein; fusion | 100.0 | |
| 3rde_A | 573 | Arachidonate 12-lipoxygenase, 12S-type; C-terminal | 100.0 | |
| 3d3l_A | 541 | Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir | 100.0 | |
| 2wxu_A | 370 | Phospholipase C; cytolysis, hydrolase, hemolysis, | 97.88 | |
| 1olp_A | 370 | Alpha-toxin; zinc phospholipase C, GAS gangrene de | 97.85 | |
| 3cwz_B | 384 | RAB6IP1, RAB6-interacting protein 1; RAB small GTP | 96.58 |
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-255 Score=2218.16 Aligned_cols=827 Identities=58% Similarity=1.034 Sum_probs=795.1
Q ss_pred eeeeEEEEEEeeccccccccc----------------------cchhhhHhhhcCCeEEEEEeecccCCCCcCCCcCccc
Q 002839 33 KKIKGTVVLMKKNVLDFNDFN----------------------ASFLDRFHELLGRKVTLQLISAVHGEPAENGLQAGKI 90 (874)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~----------------------~~~~d~~~~~~g~~v~l~lvS~~~~~~~~~g~~~~~~ 90 (874)
.++||+||+|+|+++|++++. ++++|++++++|++|+|||||++++ | +|| +||+
T Consensus 9 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~-~-~~~--~~k~ 84 (864)
T 2iuk_A 9 QKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQT-D-GSG--NGKV 84 (864)
T ss_dssp CCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEE-C-SSS--CEEE
T ss_pred CEEEEEEEEEecccccccccccccccccccccccccccccccccchhhhHHHhccCeEEEEEEecccC-C-CCC--CCcC
Confidence 689999999999999998877 7999999999999999999999987 5 488 9999
Q ss_pred CcccccccccccCCCCCCCceEEEEEeecCCCCCCceeEEeecCCCCceeEeEEEEeecCCCceEEEeecccccCCCCCC
Q 002839 91 GKLAHIEGWIPKCTPLAAGESAFNVTFEWDEDIGVPGAFLIRNNHHSEFYLKTLTLEDVPGEGRVHFVCNSWVYPAKDYN 170 (874)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~~~e~fl~~i~l~~~p~~~~~~F~c~sWv~~~~~~~ 170 (874)
|+++.|++|.++.+...+++++|+|+|+||++||+||||+|+|.|++||||++|+|+++|+++++||+||||||+.++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~ 164 (864)
T 2iuk_A 85 GKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYK 164 (864)
T ss_dssp EEEEECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSS
T ss_pred CCcccccccccCCCcCCCCcEEEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCCC
Confidence 99999999996554577889999999999999999999999999999999999999999988999999999999999999
Q ss_pred cceeeecCceeccCCCCchhhHhHHHHHHHhhCCCcccccccCceeecccccCCCCCCCCCCcccccCCCCCCCCCCCcc
Q 002839 171 TDRIFFTNKTYLPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGGSADYPYPRRG 250 (874)
Q Consensus 171 ~~r~ff~n~~yLp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~Pd~~~~~~rpvlggs~~~pyprr~ 250 (874)
.+||||+||+|||++||++|+++||+||++|||||+||||+||||||||+|||||+||++++ |||||||++|||||||
T Consensus 165 ~~RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR~ 242 (864)
T 2iuk_A 165 KNRIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRV 242 (864)
T ss_dssp SCEEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCEE
T ss_pred CCceeccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--CcccCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999988 9999999999999999
Q ss_pred cCCCCCC-CCCCCchhhhccccCccccCCCCccCcccccchHHHHHHHHHHhhhhhhhcc-C--C-CCCCCCCHHHHHHh
Q 002839 251 RTGRKLA-EDSKSESRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQVIKPALESL-D--S-SPNEFDSFDDILKL 325 (874)
Q Consensus 251 rtgr~~~-~d~~~e~r~~~~~~~~~yvPrDe~F~~~K~~~f~~~~~~~~~~~~~p~l~~~-~--~-~~~~f~sf~di~~l 325 (874)
||||+|+ +||.+|+|. .+||||||+|++.|+++|.++++|++++.++|.++++ + . +..+|+||+||++|
T Consensus 243 rtgr~~~~~dp~~e~~~------~~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~l 316 (864)
T 2iuk_A 243 RTGRERTRTDPNSEKPG------EVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSL 316 (864)
T ss_dssp CCCCCBCSSCTTSBCCC------CCCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTT
T ss_pred cCCCCCCCCCCCccccc------cCCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHH
Confidence 9999999 999999993 2999999999999999999999999999999999876 3 2 46799999999999
Q ss_pred hcCCCCCCCCchhhhhcccchhhHHHhhhcCCC-cccCCCchhhhhcccccCCcHHHHHHHhhCCCcccccccccCCCCC
Q 002839 326 YEGGIDLPNNLLDDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVICCLKEFPPTS 404 (874)
Q Consensus 326 y~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~-~~k~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~~~P~~s 404 (874)
|++|+++|+ +.+++.+|++++|++++++++ ++|||+|+|+++++++|++|++||||+|||+||++|+||++||++|
T Consensus 317 y~~g~~l~~---~~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s 393 (864)
T 2iuk_A 317 YEGGIKLPT---DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKS 393 (864)
T ss_dssp TSSCEECCH---HHHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCC
T ss_pred HhccccCch---hhhcccCcHHHHHHHhhccccchhcCCCcceecccchhhhchHHHHHHHhcCCCchhhhhhhccCCcc
Confidence 999999987 456667899999999988888 9999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCcccchhhHhhcCCCCCHHHHHhcCCEEEecccchhhhhhhcccCCC-CccccceeEEeecCCCceeeEE
Q 002839 405 KLNPELYGNQRSTITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMTYLRRINTTS-TKTYASRTILFLKADGTLKPVA 483 (874)
Q Consensus 405 ~ld~~~yg~~~s~it~e~i~~~l~G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~-~~~yA~~~Lffl~~dg~L~PIA 483 (874)
+|||++||+++|+||++||+..|+|+||++||++|||||+||||++|||+.++|... ++.|||+||||++++|+|+|||
T Consensus 394 ~ldp~~yg~~~s~it~e~i~~~l~g~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlA 473 (864)
T 2iuk_A 394 TLDPTLYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLA 473 (864)
T ss_dssp CSCHHHHCCCCCCCCHHHHGGGTTTCCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEE
T ss_pred cCChhhcCCcccccCHHHHhhccCCCcHHHHHhcCCEEEecchhhhccchhhcccCCCceeecceEEEEEcCCCCEeEEE
Confidence 999999999999999999999999999999999999999999999999999999854 4599999999999999999999
Q ss_pred EEecCCCCCCCCCCCCCeeecCCCCCCCCchhHHHHHHHHhhhhhhhHHHHHHhhhhhhhhHHHHHHhccCCCcCchhhc
Q 002839 484 IELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKL 563 (874)
Q Consensus 484 IqL~~~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kL 563 (874)
|||++|++.+++.++.++||||+|+++++|.|+|||+||++||+++||+++||++||+++|||+|||+||||.+||||||
T Consensus 474 IqLs~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kL 553 (864)
T 2iuk_A 474 IELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKL 553 (864)
T ss_dssp EEEEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHH
T ss_pred EEeeCCCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCCccCchHHh
Confidence 99999876666667889999999877778999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhchhHHHHHhcccCCceeeeeecChhhHHHHHHHHHcCCCCCCCCCchhHHhcCCCCCCCCCCcccccCCCC
Q 002839 564 LHPHFRDTMNINAFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIED 643 (874)
Q Consensus 564 L~PHfr~Tl~IN~~AR~~LI~~gG~id~~~~~g~~~~elss~~yk~w~f~~~~lP~DL~~RG~~~~D~~~~~gl~l~l~d 643 (874)
|.||||+||+||++||+.||+++|++|++|++|+++|||++++|++|+|++++||+||++|||+++|+++|||++|.|||
T Consensus 554 L~PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~elss~ayk~w~f~~~~LP~DL~~RGva~~D~~~p~gl~l~ipd 633 (864)
T 2iuk_A 554 LYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKNWVFTHQALPADLVKRGLAIEDPSAPHGLRLVIED 633 (864)
T ss_dssp HGGGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTTCCGGGSSHHHHHHHTTSEEECSSSTTSEEESSSC
T ss_pred hHHHHHHHHHHHHHHHHhccCCCCceeeeccCchhHHHHHHHHHccCCCccccCcHHHHhcCCCCCCccccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHhchhhcCCCccccCChHHHHHHHHHHhccCCCCCCCCCCCCCCChHHHHHHHhhhhhhcc
Q 002839 644 YPYAVDGLEIWASIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVAS 723 (874)
Q Consensus 644 YpYrdDgL~IW~AI~~fV~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~P~l~T~~eLv~~lT~iIf~aS 723 (874)
||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+|+++||++||+|||+||
T Consensus 634 YpYadDGL~iW~AIk~~V~~yV~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~IIf~aS 713 (864)
T 2iuk_A 634 YPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTAS 713 (864)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTTGGGTTCTTCCCSSSHHHHHHHHHHHHHHHT
T ss_pred CCccccHHHHHHHHHHHHHHHHHHHcCCchhhcCCHHHHHHHHHHHhcCCCCCCCCCCCCCcCCHHHHHHHhheeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhccCCcccccccCCCcccccCCCCCCCCchhhhcccCchHHHHhhcCcHHHHHHHHHHHHHhccCCCCccccCCc
Q 002839 724 ALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQR 803 (874)
Q Consensus 724 aqHAAVNfgQy~y~gf~PN~P~~~r~p~P~~g~~~~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~lLS~h~~de~yLG~~ 803 (874)
+||||||||||+|+||+||+|++||+|||++|+.+|++|..+||+++|++||++.||+.+|+++++||+|++||+|||+|
T Consensus 714 aqHAAVNFgQydy~gfvPN~P~~~r~p~P~~G~~~~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~yLG~~ 793 (864)
T 2iuk_A 714 ALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGER 793 (864)
T ss_dssp HHHHHHHTTHHHHHTSTTTSCCCCCSCCCCTTSHHHHHHHHCHHHHHHTTSCCHHHHHHHHHHHHHHTCCCSSCCBTTCC
T ss_pred chhhhhccccchhhcccCCCChhhcCCCCCCCchhHhhhhhChHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCccccccc
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCccccCCCCcCcccccccCCCCCCCcCccCccccC
Q 002839 804 DTPEWTSDEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874 (874)
Q Consensus 804 ~~~~~~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~~IPnSIsI 874 (874)
+++.|++|+++++|+++|+++|++||++|++||++++||||+||+++||+||+|+|++|||||+|||||||
T Consensus 794 ~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s~~g~t~~~IPNSIsI 864 (864)
T 2iuk_A 794 ETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864 (864)
T ss_dssp SCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCCCSSSCSCCCBSSCCC
T ss_pred CccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCCCCCCceeeCCCCCCCcccCCCCCcccC
Confidence 98899999999999999999999999999999999999999999999999999999999999999999998
|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A | Back alignment and structure |
|---|
| >1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 | Back alignment and structure |
|---|
| >3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 874 | ||||
| d3bnea1 | 690 | a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom | 0.0 | |
| d2p0ma1 | 551 | a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory | 0.0 | |
| d3bnea2 | 143 | b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl | 6e-74 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Score = 977 bits (2528), Expect = 0.0
Identities = 425/700 (60%), Positives = 538/700 (76%), Gaps = 17/700 (2%)
Query: 182 LPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGGS 241
+P++TP PL YRE+EL +LRG+ T E +E+DR+YDY YNDLG+P K +K RPVLGGS
Sbjct: 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60
Query: 242 ADYPYPRRGRTGRKLAE-DSKSESRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQ 300
+ +PYPRRGRTGR D +E + YVPRDE GHLK D L KS++Q
Sbjct: 61 STFPYPRRGRTGRGPTVTDPNTEKQGE-----VFYVPRDENLGHLKSKDALEIGTKSLSQ 115
Query: 301 VIKPALESLD---SSPNEFDSFDDILKLYEGGIDLPNNLLDDIRKHIPFEMLKEIFRTDG 357
+++PA ES S+P EF SF D+ LYEGGI LP D I IP ++KE++RTDG
Sbjct: 116 IVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPR---DVISTIIPLPVIKELYRTDG 172
Query: 358 -DLLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRS 416
+LKFP P V++ +SAW TDEEF REM+AG+NP VI L+EFPP S L+P +YG+Q S
Sbjct: 173 QHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSS 232
Query: 417 TITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMTYLRRIN-TTSTKTYASRTILFLKA 475
IT + ++ LDG T+DEA+ +LF+LD+HD M Y+R+IN S KTYA+RTILFL+
Sbjct: 233 KITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLRE 290
Query: 476 DGTLKPVAIELSLPHPDGDQYGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISH 535
DGTLKPVAIELSLPH GD AVS+V P+++GV+ +IW LAKAYV VNDS +HQL+SH
Sbjct: 291 DGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSH 350
Query: 536 WLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINAFARQILINAGGVLEITVFP 595
WLNTHAA+EPFVIAT+R LSVLHPIYKLL PH+R+ MNINA ARQ LINA G+ E T P
Sbjct: 351 WLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLP 410
Query: 596 GKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWA 655
KY++E+SSA+YK+W F +QALP DL KRGVA++DP++PHG+RLLIEDYPYA DGLEIWA
Sbjct: 411 SKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWA 470
Query: 656 SIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSC 715
+IK WVQ+Y YY DD VK DSELQ WWKE E+GHGD KD+PWWPK+Q E+L++ C
Sbjct: 471 AIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVC 530
Query: 716 TIIIWVASALHAAINFGQYPYAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTIT 775
IIIW+ASALHAA+NFGQYPY G + NRPT SRR +PE+GTPEY+E+ +N +K +L+TIT
Sbjct: 531 LIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTIT 590
Query: 776 AQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPLQAFDEFGKKLAEVEEKIISR 835
++L T++ +S+IEILS H++DEVYLGQRD P WTSD LQAF +FG KL E+EEK++ R
Sbjct: 591 SKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRR 650
Query: 836 NHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874
N++ +L+ NR+GPV++PYTLL P+SE GLT +GIPNS+SI
Sbjct: 651 NNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 874 | |||
| d3bnea1 | 690 | Lipoxigenase, C-terminal domain {Soybean (Glycine | 100.0 | |
| d2p0ma1 | 551 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 100.0 | |
| d3bnea2 | 143 | Plant lipoxigenase {Soybean (Glycine max), isozyme | 100.0 | |
| d2p0ma2 | 111 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 97.87 | |
| d1olpa2 | 121 | Alpha-toxin, C-terminal domain {Clostridium absonu | 97.23 | |
| d1ca1a2 | 121 | Alpha-toxin, C-terminal domain {Clostridium perfri | 96.9 | |
| d1rp1a1 | 113 | Pancreatic lipase, C-terminal domain {Dog (Canis f | 91.59 | |
| d1bu8a1 | 114 | Pancreatic lipase, C-terminal domain {Rat (Rattus | 90.86 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Probab=100.00 E-value=3.6e-216 Score=1866.84 Aligned_cols=683 Identities=62% Similarity=1.088 Sum_probs=664.1
Q ss_pred ccCCCCchhhHhHHHHHHHhhCCCcccccccCceeecccccCCCCCCCCCCcccccCCCCCCCCCCCcccCCCCCC-CCC
Q 002839 182 LPTQTPGPLRYYREQELVNLRGDVTTELQEHDRVYDYAYYNDLGDPKKGKKFERPVLGGSADYPYPRRGRTGRKLA-EDS 260 (874)
Q Consensus 182 Lp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~Pd~~~~~~rpvlggs~~~pyprr~rtgr~~~-~d~ 260 (874)
||++||++|+++||+||++|||||+||||+||||||||+|||||+||++++++|||||||++|||||||||||+|+ +||
T Consensus 1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp 80 (690)
T d3bnea1 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP 80 (690)
T ss_dssp CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCchhhhccccCccccCCCCccCcccccchHHHHHHHHHHhhhhhhhcc---CCCCCCCCCHHHHHHhhcCCCCCCCCch
Q 002839 261 KSESRLSIVYSLNIYVPRDERFGHLKMSDFLAFALKSIAQVIKPALESL---DSSPNEFDSFDDILKLYEGGIDLPNNLL 337 (874)
Q Consensus 261 ~~e~r~~~~~~~~~yvPrDe~F~~~K~~~f~~~~~~~~~~~~~p~l~~~---~~~~~~f~sf~di~~ly~~~~~~p~~~~ 337 (874)
++|+|. ..+||||||+|++.|++||+++++|+++|.++|.+.++ ..+..+|+||+||++||++|+++|.+
T Consensus 81 ~~e~r~-----~~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~~-- 153 (690)
T d3bnea1 81 NTEKQG-----EVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRD-- 153 (690)
T ss_dssp TSBCCC-----SSCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCHH--
T ss_pred CcccCC-----CCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCchh--
Confidence 999994 46999999999999999999999999999999999876 24568999999999999999999854
Q ss_pred hhhhcccchhhHHHhhhcCCC-cccCCCchhhhhcccccCCcHHHHHHHhhCCCcccccccccCCCCCCCCccccCCCCc
Q 002839 338 DDIRKHIPFEMLKEIFRTDGD-LLKFPMPQVIKEDESAWRTDEEFTREMLAGLNPVVICCLKEFPPTSKLNPELYGNQRS 416 (874)
Q Consensus 338 ~~~~~~~p~~~~~~~~~~~~~-~~k~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~~~P~~s~ld~~~yg~~~s 416 (874)
.+++.+|+++++++++++++ ++|||+|+|+++|+++|++|+|||||+|||+||++|+||++||++++||++.||++.+
T Consensus 154 -~~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~s 232 (690)
T d3bnea1 154 -VISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSS 232 (690)
T ss_dssp -HHHHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCCC
T ss_pred -hhhhcccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCchhh
Confidence 56777999999999999998 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHhhcCCCCCHHHHHhcCCEEEecccchhhhhhhcccCCC-CccccceeEEeecCCCceeeEEEEecCCCCCCCC
Q 002839 417 TITQNDIENNLDGLTVDEAIEKNKLFILDHHDSLMTYLRRINTTS-TKTYASRTILFLKADGTLKPVAIELSLPHPDGDQ 495 (874)
Q Consensus 417 ~it~e~i~~~l~G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~-~~~yA~~~Lffl~~dg~L~PIAIqL~~~~~~~~~ 495 (874)
+||+++++ ++|+||++||++|||||+||||+++|+++++|... ++.|||+||||++++|+|+||||||+++++.+++
T Consensus 233 ~it~~~i~--l~G~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~~ 310 (690)
T d3bnea1 233 KITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDL 310 (690)
T ss_dssp CCCGGGCC--CTTCCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCC
T ss_pred hhhHhhhc--cCccHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCCccc
Confidence 99999995 78999999999999999999999999999999854 5699999999999999999999999999888888
Q ss_pred CCCCCeeecCCCCCCCCchhHHHHHHHHhhhhhhhHHHHHHhhhhhhhhHHHHHHhccCCCcCchhhcccccccchhchh
Q 002839 496 YGAVSKVYTPSEDGVKGSIWQLAKAYVAVNDSGHHQLISHWLNTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNIN 575 (874)
Q Consensus 496 ~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN 575 (874)
.++.++||||+|+++++|.|+|||+||++||+++||+|+||++||+++|||||||+||||.+|||||||.||||+||+||
T Consensus 311 ~~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN 390 (690)
T d3bnea1 311 SAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNIN 390 (690)
T ss_dssp CCCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHH
T ss_pred CCCCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHHHHHHHHhcCCccCCHHHhcchhhhhhHHHH
Confidence 88999999999976668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCceeeeeecChhhHHHHHHHHHcCCCCCCCCCchhHHhcCCCCCCCCCCcccccCCCCCccchhhHHHHH
Q 002839 576 AFARQILINAGGVLEITVFPGKYAMELSSALYKSWSFPEQALPEDLKKRGVAVEDPNSPHGLRLLIEDYPYAVDGLEIWA 655 (874)
Q Consensus 576 ~~AR~~LI~~gG~id~~~~~g~~~~elss~~yk~w~f~~~~lP~DL~~RG~~~~D~~~~~gl~l~l~dYpYrdDgL~IW~ 655 (874)
++||++||++||++|+++++|+++|+|++++|++|+|++++||+||++|||+++|+++|||+++.|||||||||||+||+
T Consensus 391 ~~AR~~LI~~gGiie~~~~~~~~~~el~~~ayk~w~f~~~~lP~dL~~RGv~~~d~~~p~g~~l~ipdYPYrdDgL~iW~ 470 (690)
T d3bnea1 391 ALARQSLINANGIAETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWA 470 (690)
T ss_dssp HHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTTCCGGGGSHHHHHHHTTSEEECTTSTTSEEESSSSCHHHHHHHHHHH
T ss_pred HHHHHhccCCCCeeeecccCchhHHHHHHHHHhcCcccccCCHHHHHHcCCCcccccccccccccCCCCchhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchhhcCCCccccCChHHHHHHHHHHhccCCCCCCCCCCCCCCChHHHHHHHhhhhhhccchhhhhccCCcc
Q 002839 656 SIKKWVQDYCYFYYKNDDMVKEDSELQSWWKELREEGHGDKKDEPWWPKMQNREELIDSCTIIIWVASALHAAINFGQYP 735 (874)
Q Consensus 656 AI~~fV~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~P~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~ 735 (874)
||++||++||++||++|++|++|.|||+||+||+++|||++++.+|||+|+|+++||++||+|||+|||||||||||||+
T Consensus 471 AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~ 550 (690)
T d3bnea1 471 AIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYP 550 (690)
T ss_dssp HHHHHHHHHGGGTCSSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTSCCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHH
T ss_pred HHHHHHHHHhhhccCCccccccCHHHHHHHHHHhcccCCCCCCCCCCCCCCCHHHHHHHHHHHHhhccHHHhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcccccCCCCCCCCchhhhcccCchHHHHhhcCcHHHHHHHHHHHHHhccCCCCccccCCcCCCCCCCChHHH
Q 002839 736 YAGYLPNRPTISRRFMPEEGTPEYDELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSDEAPL 815 (874)
Q Consensus 736 y~gf~PN~P~~~r~p~P~~g~~~~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~lLS~h~~de~yLG~~~~~~~~~d~~~~ 815 (874)
|+||+||+|++||++||++++++++++..+|++++|++||++.||+.+|+++++||+|++||+|||+|++..|++|++++
T Consensus 551 y~gfvPN~P~~~r~~~P~~~~~~~~~~~~~~e~~~L~tLP~~~qa~~~~~~~~~LS~~~~de~yLG~~~~~~~~~D~~~~ 630 (690)
T d3bnea1 551 YGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKAL 630 (690)
T ss_dssp HHSSTTTSCCCBCCCCCCTTSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSCTTSCSCHHHH
T ss_pred ccCcCCCCChHhcCCCCCCCChhhhhhhhchHHHHHHhCCcHHHHHHHHHHHHHhccCCCCcccCCCCCCcccccChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcc-ccCCCCcCcccccccCCCCCCCcCccCccccC
Q 002839 816 QAFDEFGKKLAEVEEKIISRNHNKNLK-NRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 874 (874)
Q Consensus 816 ~a~~~F~~~L~~ie~~I~~RN~~~~lk-nr~g~~~~PY~~L~Pss~~g~t~~~IPnSIsI 874 (874)
+|+++|+++|++||++|++||+++++| ||+||+++||+||+|++++|||||||||||||
T Consensus 631 ~a~~~F~~~L~~Ie~~I~~RN~~~~~~~nr~g~~~~PY~~L~Ps~~~g~t~~gIPnSIsI 690 (690)
T d3bnea1 631 QAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690 (690)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccccccCCCCCCCccccCCCCCCCcCcCCCCCcccC
Confidence 999999999999999999999999999 99999999999999999999999999999998
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} | Back information, alignment and structure |
|---|
| >d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} | Back information, alignment and structure |
|---|
| >d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|