Citrus Sinensis ID: 002859
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 873 | ||||||
| 343887278 | 911 | aminopeptidase [Citrus unshiu] | 0.950 | 0.911 | 0.846 | 0.0 | |
| 225429582 | 880 | PREDICTED: puromycin-sensitive aminopept | 1.0 | 0.992 | 0.818 | 0.0 | |
| 147772895 | 880 | hypothetical protein VITISV_012143 [Viti | 1.0 | 0.992 | 0.815 | 0.0 | |
| 255550101 | 870 | puromycin-sensitive aminopeptidase, puta | 0.993 | 0.996 | 0.791 | 0.0 | |
| 356507019 | 873 | PREDICTED: puromycin-sensitive aminopept | 0.996 | 0.996 | 0.777 | 0.0 | |
| 357465783 | 876 | Puromycin-sensitive aminopeptidase [Medi | 1.0 | 0.996 | 0.768 | 0.0 | |
| 356514669 | 873 | PREDICTED: puromycin-sensitive aminopept | 0.996 | 0.996 | 0.771 | 0.0 | |
| 297798638 | 879 | hypothetical protein ARALYDRAFT_491378 [ | 0.995 | 0.988 | 0.765 | 0.0 | |
| 22329112 | 879 | aminopeptidase M1 [Arabidopsis thaliana] | 0.995 | 0.988 | 0.765 | 0.0 | |
| 449486688 | 886 | PREDICTED: LOW QUALITY PROTEIN: puromyci | 1.0 | 0.985 | 0.755 | 0.0 |
| >gi|343887278|dbj|BAK61824.1| aminopeptidase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1572 bits (4070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 808/954 (84%), Positives = 813/954 (85%), Gaps = 124/954 (12%)
Query: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN
Sbjct: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
Query: 61 RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
RSVSFTNK SSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR
Sbjct: 61 RSVSFTNKASSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
Query: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK
Sbjct: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
Query: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSD-------------VRVYCQVGKA 227
VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSD VRVYCQVGKA
Sbjct: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGTVTISIDSHGIKVRVYCQVGKA 240
Query: 228 NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD 287
NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD
Sbjct: 241 NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD 300
Query: 288 QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI 347
QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI
Sbjct: 301 QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI 360
Query: 348 WTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAEC 407
WTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAEC
Sbjct: 361 WTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAEC 420
Query: 408 FQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLE 467
FQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKV+EEKLE
Sbjct: 421 FQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVREEKLE 480
Query: 468 LEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNG 527
LEQ LGCSISKEGDNG
Sbjct: 481 LEQEL-------------------------------------------LGCSISKEGDNG 497
Query: 528 GWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSL 587
GWIKLNVNQTGFYRVKYDKDLAARLGYAIE KQLSETDRFGILDDHFALCMARQQTLTSL
Sbjct: 498 GWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTSL 557
Query: 588 LTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAE-----K 642
LTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAE K
Sbjct: 558 LTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAELFICRK 617
Query: 643 LGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAA 702
LGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAA
Sbjct: 618 LGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAA 677
Query: 703 YVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEV 762
YVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEV
Sbjct: 678 YVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEV 737
Query: 763 RSQDAVYGLAVSIEGRETAWKWLKD--------NWDHI---------------------- 792
RSQDAVYGLAVSIEGRETAWKWLK N+D I
Sbjct: 738 RSQDAVYGLAVSIEGRETAWKWLKASGVLSKEVNFDPIPSSINGRISSITGTTSQRPGVL 797
Query: 793 -------------------SKTWGSGFLITRFISSIVSP--------------FASYEKV 819
S+ S F + +S V P FASYEKV
Sbjct: 798 VFLSHALSAQLSHRFVVYTSQIMCSVFQLLHMCTSNVFPLIPFLFLSAVWHAQFASYEKV 857
Query: 820 REVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY 873
REVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
Sbjct: 858 REVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY 911
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Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429582|ref|XP_002280239.1| PREDICTED: puromycin-sensitive aminopeptidase [Vitis vinifera] gi|296081675|emb|CBI20680.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147772895|emb|CAN73668.1| hypothetical protein VITISV_012143 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255550101|ref|XP_002516101.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] gi|223544587|gb|EEF46103.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356507019|ref|XP_003522269.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357465783|ref|XP_003603176.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] gi|355492224|gb|AES73427.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356514669|ref|XP_003526026.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297798638|ref|XP_002867203.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] gi|297313039|gb|EFH43462.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|22329112|ref|NP_195035.2| aminopeptidase M1 [Arabidopsis thaliana] gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] gi|24209879|gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] gi|110742477|dbj|BAE99157.1| aminopeptidase like protein [Arabidopsis thaliana] gi|332660772|gb|AEE86172.1| aminopeptidase M1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449486688|ref|XP_004157369.1| PREDICTED: LOW QUALITY PROTEIN: puromycin-sensitive aminopeptidase-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 873 | ||||||
| TAIR|locus:2125904 | 879 | APM1 "aminopeptidase M1" [Arab | 0.995 | 0.988 | 0.749 | 0.0 | |
| ZFIN|ZDB-GENE-060524-3 | 925 | npepps "aminopeptidase puromyc | 0.963 | 0.909 | 0.452 | 4.9e-188 | |
| FB|FBgn0261243 | 1075 | Psa "Puromycin sensitive amino | 0.950 | 0.772 | 0.438 | 5.2e-184 | |
| MGI|MGI:1101358 | 920 | Npepps "aminopeptidase puromyc | 0.954 | 0.905 | 0.444 | 3.4e-180 | |
| UNIPROTKB|E1BP91 | 921 | NPEPPS "Uncharacterized protei | 0.955 | 0.905 | 0.442 | 7e-180 | |
| UNIPROTKB|E9PLK3 | 915 | NPEPPS "Puromycin-sensitive am | 0.955 | 0.911 | 0.443 | 7e-180 | |
| UNIPROTKB|P55786 | 919 | NPEPPS "Puromycin-sensitive am | 0.955 | 0.907 | 0.443 | 7e-180 | |
| UNIPROTKB|F1M9V7 | 920 | Npepps "Protein Npepps" [Rattu | 0.954 | 0.905 | 0.444 | 7e-180 | |
| UNIPROTKB|F1RWJ6 | 923 | LOC414413 "Uncharacterized pro | 0.955 | 0.903 | 0.440 | 2.7e-178 | |
| UNIPROTKB|F1P456 | 837 | NPEPPS "Uncharacterized protei | 0.914 | 0.953 | 0.447 | 5.1e-177 |
| TAIR|locus:2125904 APM1 "aminopeptidase M1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3446 (1218.1 bits), Expect = 0., P = 0.
Identities = 657/877 (74%), Positives = 749/877 (85%)
Query: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
M++FKG+PRLPKFAVPKRYD+RL PDL +C F G+VAID+D+V DT+FIVLNAADL++N+
Sbjct: 1 MDQFKGEPRLPKFAVPKRYDLRLNPDLIACTFTGTVAIDLDIVADTRFIVLNAADLSVND 60
Query: 61 RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
SVSFT SSKAL KV L E DEILVLEF E LP G+GVL +GF GVLNDKMKGFYR
Sbjct: 61 ASVSFTPPSSSKALAAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYR 120
Query: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
S+YE NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL+VP++LVALSNMP+++EK
Sbjct: 121 STYEHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEK 180
Query: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSD---VRVYCQVGKANQGKFALNVA 237
V+GN+K VSYQESPIMSTYLVA+V+GLFDYVEDHTSD VRVYCQVGKA+QGKFAL+V
Sbjct: 181 VNGNLKIVSYQESPIMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVG 240
Query: 238 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQR 297
KTL+L+KEYFAVPY LPK+DMIAIPDFAAGAMENYGLVTYRETALLYD+QHSAA+NKQR
Sbjct: 241 AKTLDLFKEYFAVPYPLPKMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQR 300
Query: 298 VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTE 357
VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLA DSLFPEWKIWTQFLDE TE
Sbjct: 301 VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTE 360
Query: 358 GLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIK 417
GLRLDGL ESHPIEVEVNH EIDEIFDAISYRKGASVIRMLQ+YLGAE FQ+SLA+YIK
Sbjct: 361 GLRLDGLEESHPIEVEVNHAAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIK 420
Query: 418 KYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVIXXXXXXXXXXXXXXXXXXXG 477
+A SNAKTEDLWAALE GSGEPVNKLM+SWTKQKGYPV+ G
Sbjct: 421 NHAYSNAKTEDLWAALEAGSGEPVNKLMSSWTKQKGYPVVSAKIKDGKLELEQSRFLSSG 480
Query: 478 SPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGD--NG--GWIKLN 533
SPG+GQWIVP+TLCCGSY+ KNFLL +KS ++D+KELLGCSI+ D NG WIK+N
Sbjct: 481 SPGEGQWIVPVTLCCGSYEKRKNFLLESKSGAYDLKELLGCSIADGSDKINGTCSWIKIN 540
Query: 534 VNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMAS 593
V+Q GFYRVKYD LAA L A E + L+ DR+GILDD FAL MARQQ+L SLLTL ++
Sbjct: 541 VDQAGFYRVKYDDSLAAGLRNATESQSLTSIDRYGILDDSFALTMARQQSLASLLTLCSA 600
Query: 594 YSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESH 653
Y +E +YTVLSNLI ISYK+ +I ADA EL+ +K FFI +FQ +A KLGWD K GESH
Sbjct: 601 YKKELDYTVLSNLIAISYKVVKIGADANQELMSGIKHFFIGVFQFAAGKLGWDPKQGESH 660
Query: 654 LDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSAS 713
LDA+LRGE+ TALA+ GH ETL EA +RF AFLADR TPLLPPDIR+AAYVAVMQ+ + S
Sbjct: 661 LDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLADRNTPLLPPDIRRAAYVAVMQRANKS 720
Query: 714 DRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLA- 772
D+SGYESLLRVYRETDLSQEKTRIL SLASCPD IV +VLNF+LS EVR+QDA+YGL+
Sbjct: 721 DKSGYESLLRVYRETDLSQEKTRILGSLASCPDPTIVQDVLNFVLSDEVRNQDALYGLSG 780
Query: 773 VSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKP 832
VS EGRE AWKWL++ W++I TWGSGFLITRFIS++VSPFAS+EK +EVEEFF++R KP
Sbjct: 781 VSWEGREVAWKWLQEKWEYIGNTWGSGFLITRFISAVVSPFASFEKAKEVEEFFATRSKP 840
Query: 833 YIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELA 869
+ARTL+QSIERV INA WVESI+ E +L + V +L+
Sbjct: 841 SMARTLKQSIERVHINANWVESIKKEDNLTQLVAQLS 877
|
|
| ZFIN|ZDB-GENE-060524-3 npepps "aminopeptidase puromycin sensitive" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0261243 Psa "Puromycin sensitive aminopeptidase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1101358 Npepps "aminopeptidase puromycin sensitive" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BP91 NPEPPS "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E9PLK3 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P55786 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1M9V7 Npepps "Protein Npepps" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RWJ6 LOC414413 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P456 NPEPPS "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00032225001 | SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (877 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
| GSVIVG00010470001 | • | • | 0.427 | ||||||||
| GSVIVG00014791001 | • | • | 0.411 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 873 | |||
| cd09601 | 446 | cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f | 0.0 | |
| pfam01433 | 390 | pfam01433, Peptidase_M1, Peptidase family M1 | 1e-170 | |
| COG0308 | 859 | COG0308, PepN, Aminopeptidase N [Amino acid transp | 1e-155 | |
| cd09602 | 438 | cd09602, M1_APN_3, Peptidase M1 family containing | 3e-91 | |
| TIGR02412 | 831 | TIGR02412, pepN_strep_liv, aminopeptidase N, Strep | 8e-71 | |
| cd09603 | 415 | cd09603, M1_APN_4, Peptidase M1 family Aminopeptid | 6e-67 | |
| cd09595 | 407 | cd09595, M1, Peptidase M1 family contains aminopep | 3e-65 | |
| pfam11838 | 323 | pfam11838, DUF3358, Domain of unknown function (DU | 3e-60 | |
| TIGR02414 | 863 | TIGR02414, pepN_proteo, aminopeptidase N, Escheric | 1e-35 | |
| cd09600 | 861 | cd09600, M1_APN_1, Peptidase M1 family containing | 6e-32 | |
| cd09599 | 442 | cd09599, M1_LTA4H, Peptidase M1 family contains le | 2e-29 | |
| cd09604 | 435 | cd09604, M1_APN_5, Peptidase M1 family containing | 3e-27 | |
| TIGR02411 | 602 | TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrola | 4e-26 | |
| pfam13485 | 128 | pfam13485, Peptidase_MA_2, Peptidase MA superfamil | 1e-19 | |
| cd09839 | 507 | cd09839, M1_TAF2, TATA binding protein (TBP) assoc | 2e-16 | |
| PRK14015 | 875 | PRK14015, pepN, aminopeptidase N; Provisional | 2e-15 | |
| cd09594 | 125 | cd09594, GluZincin, Peptidase Gluzincin family (th | 4e-05 |
| >gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ) | Back alignment and domain information |
|---|
Score = 690 bits (1782), Expect = 0.0
Identities = 248/446 (55%), Positives = 307/446 (68%), Gaps = 9/446 (2%)
Query: 18 RYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPT 77
YD+ LTPDL + F GSV I ++V T IVL+A DLTI + +V+ + L
Sbjct: 2 HYDLTLTPDLDNFTFSGSVTITLEVTEPTNEIVLHAKDLTITSATVTVGG-GNVDILVTI 60
Query: 78 KVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQ 136
++ L+ TL G L I F G LND ++GFYRSSY + GE + +A TQ
Sbjct: 61 TYSEENEFLVITLDEPLTLAGGNYTLTIEFTGELNDDLRGFYRSSYTDNGGETRYLAATQ 120
Query: 137 FEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKV-DGNMKTVSYQESPI 195
FEP DARR FPC+DEPA KATF IT+ P+ ALSNMPV E+V KT ++ +P
Sbjct: 121 FEPTDARRAFPCFDEPAFKATFTITITHPAGYTALSNMPVESEEVLGDGWKTTEFETTPP 180
Query: 196 MSTYLVAVVIGLFDYVEDHTSD---VRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPY 252
MSTYLVA V+G FDYVE T + VRVY + GK QG +AL VA K LE +++YF +PY
Sbjct: 181 MSTYLVAFVVGDFDYVEGTTKNGVPVRVYARPGKIEQGDYALEVAPKILEFFEDYFGIPY 240
Query: 253 SLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 312
LPKLD++AIPDFAAGAMEN+GL+TYRETALLYD + S+A+NKQRVATVVAHELAHQWFG
Sbjct: 241 PLPKLDLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASNKQRVATVVAHELAHQWFG 300
Query: 313 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQF-LDECTEGLRLDGLAESHPIE 371
NLVTM+WW LWLNEGFAT++ YL D L PEW +W QF LD+ L LD LA SHPI
Sbjct: 301 NLVTMKWWDDLWLNEGFATYMEYLGVDHLEPEWNMWDQFVLDDLQSALALDSLASSHPIS 360
Query: 372 VEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWA 431
V V EI EIFDAISY KGASV+RML+++LG E F++ L +Y+KK+A NA T+DLW
Sbjct: 361 VPVETPDEISEIFDAISYSKGASVLRMLEHFLGEEVFRKGLRNYLKKHAYGNATTDDLWE 420
Query: 432 ALEE--GSGEPVNKLMNSWTKQKGYP 455
AL E G+ V ++M++WT Q GYP
Sbjct: 421 ALSEASKLGKDVKEIMDTWTLQPGYP 446
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This M1 peptidase family includes eukaryotic and bacterial members: aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease, consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1 also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP) or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 446 |
| >gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1 | Back alignment and domain information |
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| >gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N | Back alignment and domain information |
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| >gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type | Back alignment and domain information |
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| >gnl|CDD|189010 cd09603, M1_APN_4, Peptidase M1 family Aminopeptidase N | Back alignment and domain information |
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| >gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase | Back alignment and domain information |
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| >gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) | Back alignment and domain information |
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| >gnl|CDD|233858 TIGR02414, pepN_proteo, aminopeptidase N, Escherichia coli type | Back alignment and domain information |
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| >gnl|CDD|189007 cd09600, M1_APN_1, Peptidase M1 family containing Aminopeptidase N | Back alignment and domain information |
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| >gnl|CDD|189006 cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4 hydrolase | Back alignment and domain information |
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| >gnl|CDD|189011 cd09604, M1_APN_5, Peptidase M1 family containing bacterial Aminopeptidase N | Back alignment and domain information |
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| >gnl|CDD|233856 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrolase/aminopeptidase | Back alignment and domain information |
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| >gnl|CDD|222169 pfam13485, Peptidase_MA_2, Peptidase MA superfamily | Back alignment and domain information |
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| >gnl|CDD|189018 cd09839, M1_TAF2, TATA binding protein (TBP) associated factor 2 | Back alignment and domain information |
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| >gnl|CDD|237585 PRK14015, pepN, aminopeptidase N; Provisional | Back alignment and domain information |
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| >gnl|CDD|189001 cd09594, GluZincin, Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins) | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 873 | |||
| KOG1046 | 882 | consensus Puromycin-sensitive aminopeptidase and r | 100.0 | |
| TIGR02412 | 831 | pepN_strep_liv aminopeptidase N, Streptomyces livi | 100.0 | |
| COG0308 | 859 | PepN Aminopeptidase N [Amino acid transport and me | 100.0 | |
| TIGR02414 | 863 | pepN_proteo aminopeptidase N, Escherichia coli typ | 100.0 | |
| PRK14015 | 875 | pepN aminopeptidase N; Provisional | 100.0 | |
| TIGR02411 | 601 | leuko_A4_hydro leukotriene A-4 hydrolase/aminopept | 100.0 | |
| PF01433 | 390 | Peptidase_M1: Peptidase family M1 This is family M | 100.0 | |
| KOG1047 | 613 | consensus Bifunctional leukotriene A4 hydrolase/am | 100.0 | |
| PF11838 | 324 | ERAP1_C: ERAP1-like C-terminal domain; InterPro: I | 100.0 | |
| KOG1932 | 1180 | consensus TATA binding protein associated factor [ | 100.0 | |
| PF13485 | 128 | Peptidase_MA_2: Peptidase MA superfamily | 99.14 | |
| COG3975 | 558 | Predicted protease with the C-terminal PDZ domain | 99.1 | |
| PF10460 | 366 | Peptidase_M30: Peptidase M30; InterPro: IPR019501 | 97.31 | |
| PF05299 | 122 | Peptidase_M61: M61 glycyl aminopeptidase; InterPro | 96.91 | |
| PF11940 | 367 | DUF3458: Domain of unknown function (DUF3458); Int | 96.36 | |
| PF04450 | 205 | BSP: Peptidase of plants and bacteria; InterPro: I | 95.99 | |
| PF07607 | 128 | DUF1570: Protein of unknown function (DUF1570); In | 95.98 | |
| PF10026 | 195 | DUF2268: Predicted Zn-dependent protease (DUF2268) | 92.32 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 91.55 | |
| PF10023 | 337 | DUF2265: Predicted aminopeptidase (DUF2265); Inter | 91.24 | |
| PRK04860 | 160 | hypothetical protein; Provisional | 85.27 | |
| COG4324 | 376 | Predicted aminopeptidase [General function predict | 83.27 | |
| PF01863 | 205 | DUF45: Protein of unknown function DUF45; InterPro | 82.12 | |
| smart00731 | 146 | SprT SprT homologues. Predicted to have roles in t | 80.24 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 80.21 |
| >KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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Probab=100.00 E-value=9.8e-154 Score=1379.12 Aligned_cols=844 Identities=48% Similarity=0.781 Sum_probs=775.7
Q ss_pred ccCCCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCCCCccccceeEEEe
Q 002859 3 EFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELV 82 (873)
Q Consensus 3 ~~~~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~ 82 (873)
++...+|||.+++|+||+|+|.|++....|.|++.|.+.+.++|+.|+||+.++.|.++.+...................
T Consensus 24 ~~~~~~rLP~~v~P~~Y~l~l~~~l~~~~f~G~v~I~l~v~~~t~~i~Lh~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 103 (882)
T KOG1046|consen 24 KFPNEYRLPTNVVPLHYDLTLKPDLEEFTFTGSVKISLEVSEATRFIVLHAKDLKITSASLVSRPSSGSVQLEVSVEEKE 103 (882)
T ss_pred cccccccCCCCCCCceeEEEEecCCcCCcceeEEEEEEEEecccCEEEEEhhhccceeEEEEecCCCCcccccccccccc
Confidence 33467899999999999999999999999999999999999999999999999999999997642211111111111111
Q ss_pred cCCeEEEEEeCCccCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeeccCCCcccccccccccCCCCCceEEEE
Q 002859 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (873)
Q Consensus 83 ~~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i 160 (873)
. .+.+.+.+++++.+| +|+|+|.|.|.+++++.|||+++|.+ .+.++++++|||||++||++|||||||++||+|+|
T Consensus 104 ~-~~~l~~~~~~~l~~~~~y~L~i~f~g~l~~~~~G~y~s~y~~~~~~~~~~~~Tqfept~AR~~FPCfDeP~~KAtF~I 182 (882)
T KOG1046|consen 104 Q-EETLVFPLNETLLAGSSYTLTIEFTGKLNDSSEGFYRSSYTDSEGSEKSIAATQFEPTDARRAFPCFDEPAFKATFTI 182 (882)
T ss_pred c-ceEEEEEcccccccCCeEEEEEEEeEeecCCcceeeeecccCCCCceEEEEEeccCccchhhcCCCCCcccccCceEE
Confidence 1 167888999999999 89999999999999999999999987 56669999999999999999999999999999999
Q ss_pred EEEeCCCCeEEecCCccce-eecCCeEEEEEecCCCccceEEEEEEeeeeeeeecccc---EEEEEeCCchhhHHHHHHH
Q 002859 161 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSD---VRVYCQVGKANQGKFALNV 236 (873)
Q Consensus 161 ~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~~~~---i~v~~~~~~~~~~~~~l~~ 236 (873)
+|.||++++|+||||+... ..++++++++|++||+||||+|||+||+|++.+..+++ +|+|++|+...++++|++.
T Consensus 183 tl~hp~~~~aLSNm~v~~~~~~~~~~~~~~F~~Tp~MstYLvAf~V~~f~~~e~~~~~~v~vrv~a~p~~~~~~~~al~~ 262 (882)
T KOG1046|consen 183 TLVHPKGYTALSNMPVIKEEPVDDGWKTTTFEKTPKMSTYLVAFAVGDFVYVETITKSGVPVRVYARPEKINQGQFALEV 262 (882)
T ss_pred EEEecCCceEeecCcccccccccCCeeEEEEEecCCCchhhheeeeeccccceeecCCCceEEEEeChHHhhHHHHHHHH
Confidence 9999999999999999976 45555999999999999999999999999999987764 9999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccc
Q 002859 237 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 316 (873)
Q Consensus 237 ~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 316 (873)
+.++|++|+++||+|||+||+|+|++|+|.+|||||||||+|+|..+|+++..++..++++++.+||||+|||||||+||
T Consensus 263 ~~~~L~~~e~~f~i~yPLpK~D~iavPdf~~GAMENwGLvtyre~~lL~~~~~ss~~~k~~va~vIaHElAHQWFGNLVT 342 (882)
T KOG1046|consen 263 ATKVLEFYEDYFGIPYPLPKLDLVAVPDFSAGAMENWGLVTYRETALLYDPQTSSSSNKQRVAEVIAHELAHQWFGNLVT 342 (882)
T ss_pred HHHHHHHHHHHhCCCCCCccccEEecCCccccchhcCcceeeeehhhccCCCcCcHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccchhhhhhhHHHHHHHHHHhhhCcchhHHHHHHHHHH-HHHhhcccCCCCCeeeecCCchhhhhhccceeechhhHH
Q 002859 317 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASV 395 (873)
Q Consensus 317 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~v 395 (873)
|+||+|+|||||||+|+++++++..+|+|..+++|+.+.+ .++..|+..++||+..++.++.+|++.||.++|.||++|
T Consensus 343 m~wW~dLWLnEGfAt~~~~~~v~~~~p~~~~~~~~~~~~l~~~l~~D~l~~shpi~~~v~~~~ei~e~fd~i~Y~KGasv 422 (882)
T KOG1046|consen 343 MKWWNDLWLNEGFATYVEYLAVDHLFPEWDIWEQFLLENLERVLSLDALASSHPISVPVESPSEIDEIFDEISYQKGASV 422 (882)
T ss_pred HhhhhhhhhcccHHHHHHHHhhccCCcchhhHHHHHHHHHHHHhhhhcccccCCeeeecCCcchhhhhhhhhhhhHHHHH
Confidence 9999999999999999999999999999999999888777 579999999999999999999999999999999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeCcEEEEEEEeecc
Q 002859 396 IRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLS 475 (873)
Q Consensus 396 l~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~G~P~v~v~~~~~~~~l~Q~rf~~ 475 (873)
||||+.++|++.|++||+.||.+|+|+|++++|||++|+...+.||+.+|+.|+.|+|||+|+|.++++.++++|+||..
T Consensus 423 lRML~~~lGe~~F~~gi~~yL~~~~y~na~~~DLw~~l~~~~~~~v~~~M~~Wt~Q~G~Pvv~V~~~~~~~~l~Q~rf~~ 502 (882)
T KOG1046|consen 423 LRMLESLLGEEVFRKGLRSYLKKHQYSNAKTEDLWDALEEGSGLDVSELMDTWTKQMGYPVVTVERNGDSLTLTQERFLS 502 (882)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHhccCCCCchhHHHHHhccCCCCHHHHHhhhhcCCCCceEEEEecCCEEEEehhhhcc
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999988
Q ss_pred CCC--CCCCeeEEEEEEEEccccceeeEEeeccceEEEecccccccccCCCCCCceEEeCCCceeEEEEEcCHHHHHHHH
Q 002859 476 SGS--PGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLG 553 (873)
Q Consensus 476 ~~~--~~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~ 553 (873)
... .....|+||++|.+.+.+.....++..++.++.++. .+ +||++|.++.|||||+||+++|+.|+
T Consensus 503 ~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~--~wi~~N~~~~g~yRV~Yd~~~w~~l~ 571 (882)
T KOG1046|consen 503 DPDPSEDNYLWWIPLTYTTSGSGSVPKFWLSSKSTTIKLPE---------SD--QWIKVNLEQTGYYRVNYDDENWALLI 571 (882)
T ss_pred CCCccccCcccceeEEEEcCCCCccceeeecCCCcceecCC---------CC--eEEEEeCCcceEEEEEeCHHHHHHHH
Confidence 764 234599999999987655445678887777777753 33 69999999999999999999999999
Q ss_pred HHHHh-cCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHH
Q 002859 554 YAIEM-KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFF 632 (873)
Q Consensus 554 ~~l~~-~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 632 (873)
++|.. ..+++.||++||+|+|+|+++|+++++.+|+++.||.+|++|.||..++..+..+.. +.. .+.+..++.|+
T Consensus 572 ~~l~~~~~~~~~~Ra~li~D~~~la~~~~~~~~~~l~l~~~l~~e~~~~p~~~~~~~l~~~~~-~~~--~~~~~~~~~~~ 648 (882)
T KOG1046|consen 572 EQLKNHESLSVIDRAQLINDAFALARAGRLPYSIALNLISYLKNETDYVPWSAAIRSLYKLHS-LED--TEIYSKFKEFV 648 (882)
T ss_pred HHHhhcCccCHhHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcccccchHHHHHHHHHHHhh-ccc--chHHHHHHHHH
Confidence 99976 689999999999999999999999999999999999999999999999999999888 444 45889999999
Q ss_pred HHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCCcchhhhhheeeeeeccc
Q 002859 633 ISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSA 712 (873)
Q Consensus 633 ~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~~~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~ 712 (873)
.+++.+.++++||.....++ ....+|..++..||..|+++|.+.|.++|..|+.+ +..||+++|.+|||.+ +++
T Consensus 649 ~~l~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~~a~~~f~~~~~~--~~~ip~~lr~~vy~~~---~~~ 722 (882)
T KOG1046|consen 649 KKLILPIFEKLGWSDGADSS-LDNMLRVSVLSFACRFGHEECLKKAVELFRQWLAG--TNPIPPDLREVVYCTA---VQF 722 (882)
T ss_pred HHHHHHHHHHhcCCccccch-hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhc--CCCCChhhhhhhhhHH---HHh
Confidence 99999999999998754443 78899999999999999999999999999999987 7789999999888765 458
Q ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhcc-CcCCcccceeeee-eccc--cHHHHHHHHHHH
Q 002859 713 SDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS-SEVRSQDAVYGLA-VSIE--GRETAWKWLKDN 788 (873)
Q Consensus 713 g~~~~~~~l~~~y~~s~~~~ek~~~l~aL~cs~d~~ll~~~L~~~l~-~~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n 788 (873)
|+++.|++++++|+++..+.||..++.||+|+++++.++++|++.++ ..++.||....+. ++.| |..+||+|++.|
T Consensus 723 g~~~~w~~~~~~y~~~~~~~e~~~~l~al~~~~~~~~l~~~l~~~~~~~~v~~qd~~~~~~~~~~~~~g~~~a~~~~~~n 802 (882)
T KOG1046|consen 723 GTEEDWEQLLELYKKETTAAEKRKLLNALSCSKDPWLLQRLLDLAFDAENVRDQDVLTLLQGISGNPRGVELAWKFLQDN 802 (882)
T ss_pred cCHhHHHHHHHHHhccccHHHHHHHHHHhccCccHHHHHHHHHHhcccccccchhHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888 4699999999988 7776 999999999999
Q ss_pred HHHHHHHhCCCcchHHHHHHhhccCCCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHh
Q 002859 789 WDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKEL 868 (873)
Q Consensus 789 ~~~i~~~~~~~~~l~~~i~~~~~~~~t~~~l~~~~~Ff~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wL~~~ 868 (873)
|+.+.++|++.+.+++++..++..+.++.+++++++||...+..+..+++++++|+++.|+.|.+++.+. +.+||.+.
T Consensus 803 ~~~l~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~le~~~~ni~W~~~~~~~--l~~~l~~~ 880 (882)
T KOG1046|consen 803 WKELLNRYGNNFELSRLISFITEPFATEEKLDEVEKFFADIPKTGAERALQQALETVKANIQWVERNEEN--LTQWLLEA 880 (882)
T ss_pred HHHHHHhcCCcHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhhhhHHHhhHHH--HHHHHHHh
Confidence 9999999996688999999999999999999999999999877666899999999999999999999999 99999875
Q ss_pred h
Q 002859 869 A 869 (873)
Q Consensus 869 ~ 869 (873)
.
T Consensus 881 ~ 881 (882)
T KOG1046|consen 881 L 881 (882)
T ss_pred c
Confidence 3
|
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| >TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type | Back alignment and domain information |
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| >COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] | Back alignment and domain information |
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| >TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type | Back alignment and domain information |
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| >PRK14015 pepN aminopeptidase N; Provisional | Back alignment and domain information |
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| >TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase | Back alignment and domain information |
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| >PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification | Back alignment and domain information |
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| >KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism] | Back alignment and domain information |
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| >PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] | Back alignment and domain information |
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| >KOG1932 consensus TATA binding protein associated factor [Transcription] | Back alignment and domain information |
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| >PF13485 Peptidase_MA_2: Peptidase MA superfamily | Back alignment and domain information |
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| >COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only] | Back alignment and domain information |
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| >PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
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| >PF05299 Peptidase_M61: M61 glycyl aminopeptidase; InterPro: IPR007963 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF11940 DUF3458: Domain of unknown function (DUF3458); InterPro: IPR024601 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] | Back alignment and domain information |
|---|
| >PF07607 DUF1570: Protein of unknown function (DUF1570); InterPro: IPR011464 This entry represents hypothetical proteins confined to bacteria | Back alignment and domain information |
|---|
| >PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >PF10023 DUF2265: Predicted aminopeptidase (DUF2265); InterPro: IPR014553 This group represents a predicted aminopeptidase | Back alignment and domain information |
|---|
| >PRK04860 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG4324 Predicted aminopeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori | Back alignment and domain information |
|---|
| >smart00731 SprT SprT homologues | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 873 | ||||
| 3se6_A | 967 | Crystal Structure Of The Human Endoplasmic Reticulu | 1e-125 | ||
| 4e36_A | 967 | Crystal Structure Of The Human Endoplasmic Reticulu | 1e-125 | ||
| 4fke_A | 909 | Crystal Structure Of Porcine Aminopeptidase-N Lengt | 1e-117 | ||
| 4f5c_A | 959 | Crystal Structure Of The Spike Receptor Binding Dom | 1e-117 | ||
| 4h5h_A | 908 | Crystal Structure Of Porcine Aminopeptidase-N Compl | 1e-117 | ||
| 4hol_A | 908 | Crystal Structure Of Porcine Aminopeptidase-N Compl | 1e-116 | ||
| 3qnf_A | 954 | Crystal Structure Of The Open State Of Human Endopl | 1e-116 | ||
| 2yd0_A | 897 | Crystal Structure Of The Soluble Domain Of Human En | 1e-116 | ||
| 3mdj_A | 921 | Er Aminopeptidase, Erap1, Bound To The Zinc Aminope | 1e-115 | ||
| 4fyq_A | 903 | Human Aminopeptidase N (Cd13) Length = 903 | 1e-113 | ||
| 3q7j_A | 780 | Engineered Thermoplasma Acidophilum F3 Factor Mimic | 1e-106 | ||
| 1z1w_A | 780 | Crystal Structures Of The Tricorn Interacting Facor | 1e-106 | ||
| 3ebg_A | 889 | Structure Of The M1 Alanylaminopeptidase From Malar | 3e-29 | ||
| 3ebi_A | 890 | Structure Of The M1 Alanylaminopeptidase From Malar | 4e-29 | ||
| 3q43_A | 891 | X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin | 4e-29 | ||
| 3t8v_A | 895 | A Bestatin-Based Chemical Biology Strategy Reveals | 9e-29 | ||
| 3u9w_A | 608 | Structure Of Human Leukotriene A4 Hydrolase In Comp | 2e-23 | ||
| 2r59_A | 616 | Leukotriene A4 Hydrolase Complexed With Inhibitor R | 2e-23 | ||
| 3cho_A | 610 | Crystal Structure Of Leukotriene A4 Hydrolase In Co | 2e-23 | ||
| 1gw6_A | 610 | Structure Of Leukotriene A4 Hydrolase D375n Mutant | 2e-23 | ||
| 1hs6_A | 611 | Structure Of Leukotriene A4 Hydrolase Complexed Wit | 2e-23 | ||
| 1sqm_A | 610 | Structure Of [r563a] Leukotriene A4 Hydrolase Lengt | 3e-23 | ||
| 3b7s_A | 616 | [e296q]lta4h In Complex With Rsr Substrate Length = | 6e-23 | ||
| 1h19_A | 611 | Structure Of [e271q] Leukotriene A4 Hydrolase Lengt | 6e-23 | ||
| 2hpo_A | 891 | Structure Of Aminopeptidase N From E. Coli Suggests | 3e-21 | ||
| 2dq6_A | 870 | Crystal Structure Of Aminopeptidase N From Escheric | 3e-21 | ||
| 3puu_A | 891 | Crystal Structure Of Glu121gln Mutant Of E. Coli Am | 6e-21 | ||
| 2xq0_A | 632 | Structure Of Yeast Lta4 Hydrolase In Complex With B | 5e-18 | ||
| 3cia_A | 605 | Crystal Structure Of Cold-Aminopeptidase From Colwe | 6e-18 | ||
| 2xpy_A | 632 | Structure Of Native Leukotriene A4 Hydrolase From S | 9e-18 | ||
| 2gtq_A | 867 | Crystal Structure Of Aminopeptidase N From Human Pa | 1e-16 | ||
| 3rjo_A | 419 | Crystal Structure Of Erap1 Peptide Binding Domain L | 7e-16 |
| >pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 | Back alignment and structure |
|
| >pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 | Back alignment and structure |
| >pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 | Back alignment and structure |
| >pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 | Back alignment and structure |
| >pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 | Back alignment and structure |
| >pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 | Back alignment and structure |
| >pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 | Back alignment and structure |
| >pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 | Back alignment and structure |
| >pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 | Back alignment and structure |
| >pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 | Back alignment and structure |
| >pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780 | Back alignment and structure |
| >pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780 | Back alignment and structure |
| >pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Length = 889 | Back alignment and structure |
| >pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Complexed With The Phosphinate Dipeptide Analog Length = 890 | Back alignment and structure |
| >pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin Derivative 15 Length = 891 | Back alignment and structure |
| >pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals Distinct Roles For Malaria M1- And M17-Family Aminopeptidases Length = 895 | Back alignment and structure |
| >pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex With Inhibitor Sc57461a Length = 608 | Back alignment and structure |
| >pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041 Length = 616 | Back alignment and structure |
| >pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide Length = 610 | Back alignment and structure |
| >pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant Length = 610 | Back alignment and structure |
| >pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With Bestatin. Length = 611 | Back alignment and structure |
| >pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase Length = 610 | Back alignment and structure |
| >pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate Length = 616 | Back alignment and structure |
| >pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase Length = 611 | Back alignment and structure |
| >pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A Compartmentalized, Gated Active Site Length = 891 | Back alignment and structure |
| >pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia Coli Length = 870 | Back alignment and structure |
| >pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli Aminopeptidase N Length = 891 | Back alignment and structure |
| >pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin Length = 632 | Back alignment and structure |
| >pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia Psychrerythraea Length = 605 | Back alignment and structure |
| >pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From Saccharomyces Cerevisiae Length = 632 | Back alignment and structure |
| >pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen Neisseria Meningitidis Length = 867 | Back alignment and structure |
| >pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 873 | |||
| 3se6_A | 967 | Endoplasmic reticulum aminopeptidase 2; thermolysi | 0.0 | |
| 2xdt_A | 897 | Endoplasmic reticulum aminopeptidase 1; glycoprote | 0.0 | |
| 1z5h_A | 780 | Tricorn protease interacting factor F3; zinc amino | 0.0 | |
| 2xq0_A | 632 | LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B | 0.0 | |
| 3cia_A | 605 | Cold-active aminopeptidase; psychrohilic, hydrolas | 0.0 | |
| 3b7s_A | 616 | Leukotriene A-4 hydrolase; transition state, analo | 0.0 | |
| 3ebh_A | 889 | PFA-M1, M1 family aminopeptidase; hydrolase, metal | 1e-167 | |
| 2gtq_A | 867 | Aminopeptidase N; alanine aminopeptidase, M1 famil | 1e-148 | |
| 3b34_A | 891 | Aminopeptidase N; protease, hydrolase, thermolysin | 1e-143 | |
| 3rjo_A | 419 | Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd | 1e-110 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 4fgm_A | 597 | Aminopeptidase N family protein; structural genomi | 5e-07 |
| >3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 | Back alignment and structure |
|---|
Score = 1004 bits (2598), Expect = 0.0
Identities = 290/911 (31%), Positives = 461/911 (50%), Gaps = 72/911 (7%)
Query: 9 RLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTN- 67
RLP +P YD+ + P+LTS F S I+V V T+FI+L++ DL I N ++
Sbjct: 68 RLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEED 127
Query: 68 KVSSKALEPTKVELVEADEILVLEFAETLPTGM-GVLAIGFEGVLNDKMKGFYRSSYE-L 125
K + KV A E + L E L + +A+ F+ L D +GFY+S+Y L
Sbjct: 128 SRYMKPGKELKVLSYPAHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTL 187
Query: 126 NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK-VDGN 184
GE + +AVT FEP AR FPC+DEP KA F I + S +ALSNMP + ++G
Sbjct: 188 GGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIELEGG 247
Query: 185 MKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSD---VRVYCQVGKANQGKFALNVAVKTL 241
+ ++ + MSTYLVA ++ F + TS V +Y K NQ +AL ++K L
Sbjct: 248 LLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLL 307
Query: 242 ELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATV 301
+ Y++YF + Y L KLD+IAIPDFA GAMEN+GL+TYRET+LL+D + S+A++K V V
Sbjct: 308 DFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRV 367
Query: 302 VAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRL 361
+AHELAHQWFGNLVTMEWW +WLNEGFA ++ +A ++ +PE + FL+ C E +
Sbjct: 368 IAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITK 427
Query: 362 DGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYAC 421
D L S PI +I E+FD +SY KGA ++ ML+++LG E FQ+ + Y+KK++
Sbjct: 428 DSLNSSRPISKPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSY 487
Query: 422 SNAKTEDLWAALEE---------------------------GSGEPVNKLMNSWTKQKGY 454
NAK +DLW++L G V ++M +WT QKG
Sbjct: 488 RNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGI 547
Query: 455 PVISVKVKEEKLELEQSQFLSSGSPGDGQ---------WIVPITLCCGSYDVCKNFLLYN 505
P++ VK L L+Q +FL D + W +P+T S +V +L +
Sbjct: 548 PLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKS 607
Query: 506 KSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIE--MKQLSE 563
K+D+ D+ + W+K NV+ G+Y V Y+ +L + L
Sbjct: 608 KTDTLDLP-----------EKTSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRP 656
Query: 564 TDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLIT-ISYKIGRIAADARP 622
DR G++ D F L A + TL L + ET L ++ + +
Sbjct: 657 KDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNIS 716
Query: 623 ELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRF 682
++ + LK++ + F+ ++ W S D +LR + L H + +A++ F
Sbjct: 717 DISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQKAAELF 774
Query: 683 HAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLA 742
++ +P D+ K Y Q +G+ LL Y + S E+ +IL +L+
Sbjct: 775 SQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALS 829
Query: 743 SCPDVNIVLEVLNFLLSSE-VRSQDAVY---GLAVSIEGRETAWKWLKDNWDHISKTWGS 798
+ +L+++ + + +++Q+ +A +G++ AW ++++NW H+ K +
Sbjct: 830 TSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDL 889
Query: 799 G-FLITRFISSIVSPFASYEKVREVEEFFSSR-CKPYIARTLRQSIERVQINAKWVESIR 856
G + I IS + F+S +K++EV+ FF S + + +E + N KW+E +
Sbjct: 890 GSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQGSHLDIFQTVLETITKNIKWLE--K 947
Query: 857 NEGHLAEAVKE 867
N L +
Sbjct: 948 NLPTLRTWLMV 958
|
| >1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 | Back alignment and structure |
|---|
| >2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632 | Back alignment and structure |
|---|
| >3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605 | Back alignment and structure |
|---|
| >3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616 | Back alignment and structure |
|---|
| >3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889 | Back alignment and structure |
|---|
| >2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867 | Back alignment and structure |
|---|
| >3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891 | Back alignment and structure |
|---|
| >3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Length = 597 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 873 | |||
| 3se6_A | 967 | Endoplasmic reticulum aminopeptidase 2; thermolysi | 100.0 | |
| 4fke_A | 909 | Aminopeptidase N; zinc aminopeptidase, hydrolase; | 100.0 | |
| 2xdt_A | 897 | Endoplasmic reticulum aminopeptidase 1; glycoprote | 100.0 | |
| 1z5h_A | 780 | Tricorn protease interacting factor F3; zinc amino | 100.0 | |
| 2gtq_A | 867 | Aminopeptidase N; alanine aminopeptidase, M1 famil | 100.0 | |
| 3ebh_A | 889 | PFA-M1, M1 family aminopeptidase; hydrolase, metal | 100.0 | |
| 3b34_A | 891 | Aminopeptidase N; protease, hydrolase, thermolysin | 100.0 | |
| 3cia_A | 605 | Cold-active aminopeptidase; psychrohilic, hydrolas | 100.0 | |
| 3u9w_A | 608 | Leukotriene A-4 hydrolase; hydrolase-hydrolase inh | 100.0 | |
| 2xq0_A | 632 | LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B | 100.0 | |
| 3rjo_A | 419 | Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd | 100.0 | |
| 4fgm_A | 597 | Aminopeptidase N family protein; structural genomi | 99.94 |
| >3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-163 Score=1489.57 Aligned_cols=846 Identities=34% Similarity=0.594 Sum_probs=769.5
Q ss_pred CCCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCCCC--ccccceeEEEe
Q 002859 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELV 82 (873)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~--~~~~~~~~~~~ 82 (873)
-..+|||.+++|.||+|.|++++++.+|+|+|+|++++.++++.|+||+++|+|.++++.+..+... .........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 4568999999999999999999999999999999999999999999999999999999875321100 01112222333
Q ss_pred cCCeEEEEEeCCccCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeeccCCCcccccccccccCCCCCceEEEE
Q 002859 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (873)
Q Consensus 83 ~~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i 160 (873)
.++.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678999999999999 99999999999999999999999976 78889999999999999999999999999999999
Q ss_pred EEEeCCCCeEEecCCccce-eecCCeEEEEEecCCCccceEEEEEEeeeeeeeecc-cc--EEEEEeCCchhhHHHHHHH
Q 002859 161 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHT-SD--VRVYCQVGKANQGKFALNV 236 (873)
Q Consensus 161 ~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~ms~yl~a~~vg~f~~~~~~~-~~--i~v~~~~~~~~~~~~~l~~ 236 (873)
+|++|++|+|+|||++.++ ...+++++++|++|||||+||+||+||+|+.++..+ .+ +++|++|+..++++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 345678899999999999999999999999987643 23 9999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeccccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccc
Q 002859 237 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 316 (873)
Q Consensus 237 ~~~~l~~~e~~fg~~yp~~k~d~v~~p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 316 (873)
+.+++++||++||+|||++|+|+|++|+|+.||||||||++|+|..+|+++..++...+++++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred cCccchhhhhhhHHHHHHHHHHhhhCcchhHHHHHHHHHHHHHhhcccCCCCCeeeecCCchhhhhhccceeechhhHHH
Q 002859 317 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 396 (873)
Q Consensus 317 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 396 (873)
|+||+|+|||||||+|++++++++.+|+|.+...|+.+...++..|+..++||+..++.++.+++..|+.++|.||++||
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999987777666557889999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc---------------------------cCCCHHHHHHHhh
Q 002859 397 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT 449 (873)
Q Consensus 397 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------~~~~l~~~~~~W~ 449 (873)
|||+..||++.|+++|+.|+++|+|++++++|||++++++ +|.+|++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6889999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---------CCCeeEEEEEEEEccccceeeEEeeccceEEEecccccccc
Q 002859 450 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 520 (873)
Q Consensus 450 ~~~G~P~v~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 520 (873)
.|+|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999889999999999875432 23589999999987655445577776666666642
Q ss_pred cCCCCCCceEEeCCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCC
Q 002859 521 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEET 598 (873)
Q Consensus 521 ~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~ 598 (873)
.+ +||++|.++.||||||||+++|++|+++|..+ .|++.||||||+|+|+||++|.++|+.+|+|++||++|+
T Consensus 617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~ 691 (967)
T 3se6_A 617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET 691 (967)
T ss_dssp ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence 34 89999999999999999999999999999753 699999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 002859 599 EYTVLSNLITISYKIGRIAADA-RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNE 677 (873)
Q Consensus 599 ~~~~w~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~~~~~c~~~ 677 (873)
+|+||.++++.|.+|.+++... .++.+..|++|+++++.++++++||+ +++++.++++|..++.+||.+|+++|+++
T Consensus 692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~ 769 (967)
T 3se6_A 692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQK 769 (967)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999999988632 24578899999999999999999998 46889999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 002859 678 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 757 (873)
Q Consensus 678 A~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~~l~aL~cs~d~~ll~~~L~~~ 757 (873)
|+++|++|++++....||||+|.+|||+++ + ++++|++||++|+++++++||..+|.||||++|+++|+++|+++
T Consensus 770 A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~---~--~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 844 (967)
T 3se6_A 770 AAELFSQWMESSGKLNIPTDVLKIVYSVGA---Q--TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELG 844 (967)
T ss_dssp HHHHHHHHHHTTTCSCCCHHHHHHHHHHHT---T--SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccCChhhhhHhHhhhh---c--cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 999999999875444699999999998764 3 48899999999999999999999999999999999999999999
Q ss_pred ccCc-CCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCCc
Q 002859 758 LSSE-VRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKP 832 (873)
Q Consensus 758 l~~~-i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~l~~~~~Ff~~~~~~ 832 (873)
+++. ||.||...++. ++.| |++++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||++++..
T Consensus 845 l~~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~nw~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~l~~~~~f~~~~~~~ 924 (967)
T 3se6_A 845 MEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ 924 (967)
T ss_dssp HHCSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTTTTCCSHHHHHHHHHHHHHSCSS
T ss_pred hCcCcCcHhHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCcc
Confidence 9874 89999999998 8877 99999999999999999999854 689999999999999999999999999987654
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhhcc
Q 002859 833 -YIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR 871 (873)
Q Consensus 833 -~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wL~~~~~~ 871 (873)
...++++|++|+|+.|++|++++.+. |.+||+.|+++
T Consensus 925 ~~~~~~~~q~le~i~~ni~W~~~~~~~--i~~wl~~~~~~ 962 (967)
T 3se6_A 925 GSHLDIFQTVLETITKNIKWLEKNLPT--LRTWLMVNTRH 962 (967)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcccc
Confidence 34689999999999999999999999 99999999876
|
| >4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* | Back alignment and structure |
|---|
| >1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* | Back alignment and structure |
|---|
| >2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} | Back alignment and structure |
|---|
| >3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* | Back alignment and structure |
|---|
| >3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* | Back alignment and structure |
|---|
| >3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
| >3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ... | Back alignment and structure |
|---|
| >2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* | Back alignment and structure |
|---|
| >3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 873 | ||||
| d3b7sa3 | 252 | d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat | 6e-48 | |
| d3b7sa2 | 208 | b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-term | 2e-33 |
| >d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Score = 169 bits (427), Expect = 6e-48
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 19/252 (7%)
Query: 218 VRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLV 276
V+ + + + + + L++ ++ PY + D++ + P F G MEN L
Sbjct: 10 TLVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPPSFPYGGMENPCLT 68
Query: 277 TYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYL 336
T L A + ++ V+AH+++H W GNLVT + W H WLNEG ++
Sbjct: 69 FVTPTLL---------AGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERH 119
Query: 337 AADSLFPEWKIWTQFLDECTE-GLRLDGLAESHPIEVEVNHTGEID--EIFDAISYRKGA 393
LF E L E + E+HP V +ID + ++ Y KG
Sbjct: 120 ICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGF 179
Query: 394 SVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSW 448
+++ L+ LG E F L +Y++K++ + T+D L + V+ L N+W
Sbjct: 180 ALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAW 239
Query: 449 TKQKGYPVISVK 460
G P I
Sbjct: 240 LYSPGLPPIKPN 251
|
| >d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 873 | |||
| d3b7sa3 | 252 | Leukotriene A4 hydrolase catalytic domain {Human ( | 100.0 | |
| d3b7sa2 | 208 | Leukotriene A4 hydrolase N-terminal domain {Human | 100.0 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 91.78 | |
| d1u4ga_ | 298 | Elastase {Pseudomonas aeruginosa [TaxId: 287]} | 84.45 | |
| d1bqba_ | 301 | Aureolysin {Staphylococcus aureus [TaxId: 1280]} | 80.29 |
| >d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-49 Score=410.26 Aligned_cols=234 Identities=26% Similarity=0.453 Sum_probs=204.8
Q ss_pred cEEEEEeCCchhhHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeec-CCCCcccccccccceeccccccccCCCChhHHH
Q 002859 217 DVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANK 295 (873)
Q Consensus 217 ~i~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~~yp~~k~d~v~~-p~~~~gamen~gli~~~e~~ll~~~~~~~~~~~ 295 (873)
.||||++|+..+.++++++.++++|++||++|| |||++|+|+|++ |+++.|||||||++++++..++.+..
T Consensus 9 ~vrv~~~p~~~~~~~~~l~~~~~~l~~~e~~~g-~YP~~k~d~v~~~~~~~~ggmE~~~l~~~~~~~~~~~~~------- 80 (252)
T d3b7sa3 9 RTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS------- 80 (252)
T ss_dssp TEEEEECGGGHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST-------
T ss_pred ceEEEEccchHHHHHHHHHHHHHHHHHHHHhCC-CCCchhcCEEEeCCCccccccccceeeeecchhccccch-------
Confidence 399999999999999999999999999999998 999999999999 68889999999999999985443332
Q ss_pred HHHHHHHHHHHHHHHhcCccccCccchhhhhhhHHHHHHHHHHhhhCcchhHHHHHHHHHH-HHHhhcccCCCCCeeeec
Q 002859 296 QRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEV 374 (873)
Q Consensus 296 ~~~~~~iaHElaHqWfGnlVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~pi~~~~ 374 (873)
+..+||||+|||||||+||++||+|+||+||||+|++.+++++.+|+............ .....|+....+|+..++
T Consensus 81 --~~~~iaHE~aHqWfG~~Vt~~~w~~~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (252)
T d3b7sa3 81 --LSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLV 158 (252)
T ss_dssp --TTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSS
T ss_pred --HHHHHHHHHHHHHHhhhceeccccchHhhccHHHHHHHHhhccccchhhhhhhhhhhhhhHHHHHhhhhccCCcceee
Confidence 44689999999999999999999999999999999999999999987655444333332 335567777888887655
Q ss_pred CCch--hhhhhccceeechhhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHH----HHH
Q 002859 375 NHTG--EIDEIFDAISYRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNS 447 (873)
Q Consensus 375 ~~~~--~~~~~f~~i~Y~Kg~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~----~~~ 447 (873)
..+. +.+..|+.++|.||++||+||+..|| ++.|+++||.|+++|++++++++||++++++++|.++..+ |++
T Consensus 159 ~~~~~~~~~~~f~~~~Y~Kga~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~~~~~~~~~f~~ 238 (252)
T d3b7sa3 159 VDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNA 238 (252)
T ss_dssp CCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHTTSCHHH
T ss_pred ccccccchhhcccceeecchhHHHHHHHHHhccHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhccccchhhHhHHHH
Confidence 4433 34568999999999999999999999 6889999999999999999999999999999999999988 999
Q ss_pred hhcCCCcceEEEE
Q 002859 448 WTKQKGYPVISVK 460 (873)
Q Consensus 448 W~~~~G~P~v~v~ 460 (873)
|++|+|||+|+|+
T Consensus 239 W~~~~G~P~l~v~ 251 (252)
T d3b7sa3 239 WLYSPGLPPIKPN 251 (252)
T ss_dssp HHHCCSSCSSCCC
T ss_pred HhcCCCCCeeecc
Confidence 9999999999885
|
| >d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
|---|
| >d1u4ga_ d.92.1.2 (A:) Elastase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|