Citrus Sinensis ID: 002906
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 867 | ||||||
| 359496777 | 825 | PREDICTED: uncharacterized protein LOC10 | 0.769 | 0.808 | 0.689 | 0.0 | |
| 224133168 | 789 | predicted protein [Populus trichocarpa] | 0.778 | 0.855 | 0.656 | 0.0 | |
| 296084627 | 648 | unnamed protein product [Vitis vinifera] | 0.735 | 0.984 | 0.688 | 0.0 | |
| 255572563 | 871 | DNA binding protein, putative [Ricinus c | 0.779 | 0.776 | 0.627 | 0.0 | |
| 297821489 | 920 | hypothetical protein ARALYDRAFT_343817 [ | 0.869 | 0.819 | 0.568 | 0.0 | |
| 356496614 | 852 | PREDICTED: uncharacterized protein LOC10 | 0.760 | 0.773 | 0.627 | 0.0 | |
| 356531387 | 827 | PREDICTED: uncharacterized protein LOC10 | 0.803 | 0.842 | 0.591 | 0.0 | |
| 357485319 | 897 | Glycine-rich protein [Medicago truncatul | 0.753 | 0.727 | 0.626 | 0.0 | |
| 449465866 | 853 | PREDICTED: uncharacterized protein LOC10 | 0.833 | 0.847 | 0.565 | 0.0 | |
| 449514696 | 853 | PREDICTED: uncharacterized protein LOC10 | 0.833 | 0.847 | 0.565 | 0.0 |
| >gi|359496777|ref|XP_002265108.2| PREDICTED: uncharacterized protein LOC100252003 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/676 (68%), Positives = 549/676 (81%), Gaps = 9/676 (1%)
Query: 5 MEKEQEFEWAEAQEIEISVDDLVAAAKQQLQFLAAVDRNRWLYEGPALQRAIYRYNACWL 64
MEKEQE EW EAQ+I IS +DLVA AK QLQFLA VD++R LY+GP LQ+AIYRYNACWL
Sbjct: 1 MEKEQELEWLEAQKIVIS-EDLVAVAKMQLQFLAVVDKHRCLYDGPTLQKAIYRYNACWL 59
Query: 65 PLLAKHSESHISKGCLVVPLDCEWIWHCHRLNPVQYKSDCEELYGKNLDNSYVVSSIQGT 124
PLLAKHSES I KG LVVP+DCEWIWHCHRLNPV+YK+DCE+LYG+ LDN VVSS+QG
Sbjct: 60 PLLAKHSESQIFKGPLVVPVDCEWIWHCHRLNPVRYKTDCEDLYGRILDNYNVVSSVQGA 119
Query: 125 CRKETEEIWNRLYPEEPYELDLAKISSEDFSAELSGLEKFTKYDLVSAVKRQSPFFYQVS 184
ETEEIWN +YP EPY LDL K S+D S ++SG EK TKYDLVSAVKRQSPF YQVS
Sbjct: 120 STSETEEIWNTMYPNEPYLLDLTKDFSKDTSEKISGCEKHTKYDLVSAVKRQSPFCYQVS 179
Query: 185 RSHFNNDVFLEEAVARYKGFLHLIKKNRERSIKRFCVPTYDIDLIWHTHQLHPDSYCKDM 244
R H NN FLE AVARYKGFL+LIK+NRERSIK FCVPTYDIDLIWH+HQLHP SYCKD+
Sbjct: 180 RPHMNNQHFLEGAVARYKGFLYLIKRNRERSIKCFCVPTYDIDLIWHSHQLHPVSYCKDL 239
Query: 245 SKTLGKVLEHDDMDQDRTKGKKLDTGFSGTTKQWEETFGSRYPKAGAMYRGTAPSPLTTI 304
K +GKVLEHDDMD DRTKGKKLD GFS TTKQWEETFGSRY +AGAM+RG+APSPLTT
Sbjct: 240 CKLVGKVLEHDDMDSDRTKGKKLDVGFSETTKQWEETFGSRYWRAGAMHRGSAPSPLTTT 299
Query: 305 PFSSDIVSKEVVSSKECQKIINIPDLKIVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQP 364
P+S ++++K+VV+ +CQKII +P++K+VEV +EIV VKNLP H KG L+V FSK+QP
Sbjct: 300 PYSPNMMTKKVVAPYDCQKIIQLPEVKVVEVLLEIVGVKNLPVGH--KGSLYVSFSKTQP 357
Query: 365 DIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTS---KIPMTGASKTMGTAS 421
D FNAK++LTI S+SG KQVASFQCE TGELLF+L+SHS S +P++ SK MG+ S
Sbjct: 358 DTIFNAKRRLTIFSESGEKQVASFQCEPTGELLFQLISHSPSNLPNLPISRPSKKMGSTS 417
Query: 422 LSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPTLAPHLLRMVRSRPLS 481
LSL+ F+SPIS+L+VE+W +LVP SGNVS+KPI LRIA+SFT+P LAP + V SRP
Sbjct: 418 LSLREFLSPISRLSVEKWLELVPSSGNVSAKPICLRIAISFTVPALAPRIFHTVCSRPFL 477
Query: 482 KSSCFFPLPGRIQPAKSWTRVIDETQSEVISLQMRDPKKEKGGDNCTLRKQVIGVTESGE 541
+SSCFFPLPGRIQ AK WTRVIDE SEVISLQMRD KK D R++VIGVT S E
Sbjct: 478 RSSCFFPLPGRIQHAKRWTRVIDEAGSEVISLQMRDSKKGTARDTSVSRREVIGVTTSLE 537
Query: 542 TITLAEMVETGWSVMDCCWSLK--KKSSKEGHLFELLGNRMINLFPGRKLDYEHKHCQKQ 599
TITLAE V TGWS+MD W LK KKS K+GHLFEL+GNRM+ ++PGRKL++EHKHC++Q
Sbjct: 538 TITLAEFVGTGWSLMDYNWCLKFEKKSGKDGHLFELVGNRMVKIYPGRKLEFEHKHCERQ 597
Query: 600 RSEEDFVTAIEFSPADPYGKAIALLDLKSGVIKVKEEWFLLLGIISAFILSDAL-KEGYD 658
+S+ F+TA+EFS PYG+A+ALLDLKSG +KV EEW +L GII FILSD L KEG D
Sbjct: 598 KSDHGFLTAVEFSAEVPYGRAVALLDLKSGFLKVNEEWLVLPGIILVFILSDILRKEGCD 657
Query: 659 GFTANNEVMKEMKSAS 674
FT + +KE ++ S
Sbjct: 658 SFTVSEGNLKETENLS 673
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224133168|ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|222868496|gb|EEF05627.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|296084627|emb|CBI25715.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255572563|ref|XP_002527215.1| DNA binding protein, putative [Ricinus communis] gi|223533391|gb|EEF35141.1| DNA binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297821489|ref|XP_002878627.1| hypothetical protein ARALYDRAFT_343817 [Arabidopsis lyrata subsp. lyrata] gi|297324466|gb|EFH54886.1| hypothetical protein ARALYDRAFT_343817 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356496614|ref|XP_003517161.1| PREDICTED: uncharacterized protein LOC100810300 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356531387|ref|XP_003534259.1| PREDICTED: uncharacterized protein LOC100782361 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357485319|ref|XP_003612947.1| Glycine-rich protein [Medicago truncatula] gi|163889366|gb|ABY48136.1| glycine-rich protein [Medicago truncatula] gi|355514282|gb|AES95905.1| Glycine-rich protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449465866|ref|XP_004150648.1| PREDICTED: uncharacterized protein LOC101219844 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449514696|ref|XP_004164454.1| PREDICTED: uncharacterized protein LOC101228427 [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 867 | ||||||
| TAIR|locus:2065983 | 819 | AT2G22660 "AT2G22660" [Arabido | 0.722 | 0.764 | 0.603 | 9.2e-210 | |
| TAIR|locus:2121013 | 787 | AT4G37900 [Arabidopsis thalian | 0.722 | 0.795 | 0.588 | 6.6e-200 | |
| WB|WBGene00017980 | 792 | F32B5.7 [Caenorhabditis elegan | 0.280 | 0.306 | 0.372 | 1.3e-39 | |
| TAIR|locus:2011821 | 752 | AT1G56230 "AT1G56230" [Arabido | 0.265 | 0.305 | 0.308 | 3e-28 | |
| CGD|CAL0005494 | 722 | orf19.4880 [Candida albicans ( | 0.136 | 0.163 | 0.348 | 3e-10 | |
| UNIPROTKB|Q5AP84 | 722 | YFW5 "Hypothetical YFW family | 0.136 | 0.163 | 0.348 | 3e-10 | |
| CGD|CAL0002220 | 619 | orf19.6449 [Candida albicans ( | 0.129 | 0.180 | 0.338 | 2.3e-09 | |
| UNIPROTKB|Q5A314 | 619 | YFW4 "Hypothetical YFW family | 0.129 | 0.180 | 0.338 | 2.3e-09 | |
| CGD|CAL0006251 | 723 | orf19.4921 [Candida albicans ( | 0.128 | 0.153 | 0.341 | 3.8e-09 | |
| UNIPROTKB|Q5AL56 | 723 | YFW1 "Hypothetical YFW family | 0.128 | 0.153 | 0.341 | 3.8e-09 |
| TAIR|locus:2065983 AT2G22660 "AT2G22660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2028 (719.0 bits), Expect = 9.2e-210, P = 9.2e-210
Identities = 384/636 (60%), Positives = 490/636 (77%)
Query: 40 VDRNRWLYEGPALQRAIYRYNACWLPLLAKHSESH-ISKGCLVVPLDCEWIWHCHRLNPV 98
VDRNRWLY+GPAL++AIYRYNACWLPLL K+SES +S+G LV PLDCEWIWHCHRLNPV
Sbjct: 37 VDRNRWLYDGPALEKAIYRYNACWLPLLVKYSESSSVSEGSLVPPLDCEWIWHCHRLNPV 96
Query: 99 QYKSDCEELYGKNLDNSYVVSSIQGTCRKETEEIWNRLYPEEPYELDLAKISSEDFSAEL 158
+Y SDCE+ YG+ LDNS V+SS+ G C+ +TE++W RLYP+EPYELDL I ED S +
Sbjct: 97 RYNSDCEQFYGRVLDNSGVLSSVDGNCKLKTEDLWKRLYPDEPYELDLDNIDLEDISEKS 156
Query: 159 SGLEKFTKYDLVSAVKRQSPFFYQVSRSHFNNDVFLEEAVARYKGFLHLIKKNRERSIKR 218
S LEK TKYDLVSAVKRQSPF+YQVSRSH N+D+FL+EAVARYKGFL+LIK NRERS+KR
Sbjct: 157 SALEKCTKYDLVSAVKRQSPFYYQVSRSHVNSDIFLQEAVARYKGFLYLIKMNRERSLKR 216
Query: 219 FCVPTYDIDLIWHTHQLHPDSYCKDMSKTLGKVLEHDDMDQDRTKGKKLDTGFSGTTKQW 278
FCVPTYD+DLIWHTHQLHP SYC DM K +GKVLEHDD D DR KGKKLDTGFS TT QW
Sbjct: 217 FCVPTYDVDLIWHTHQLHPVSYCDDMVKLIGKVLEHDDTDSDRGKGKKLDTGFSKTTAQW 276
Query: 279 EETFGSRYPKAGAMYRGTAPSPLTTIPFSSDIVSKEVVSSKECQKIINIPDLKIVEVFVE 338
EETFG+RY KAGAM+RG P P+T P++SD++ K+ + + Q +I P++++VEV +E
Sbjct: 277 EETFGTRYWKAGAMHRGKTPVPVTNSPYASDVLVKDPTAKDDFQNLIQFPEVEVVEVLLE 336
Query: 339 IVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLF 398
I+ V+NLP+ HK G + V FSK+QPD FNA+++LTILS+ G KQVA+FQCE TGEL+F
Sbjct: 337 IIGVRNLPDGHK--GKVSVMFSKTQPDSLFNAERRLTILSEVGEKQVATFQCEPTGELVF 394
Query: 399 ELVSHSTSKIPMTGASKTMGTASLSLQNFISP-ISKLAVEQWFDLVPRSGN-VSSKPISL 456
+L+S S SKIP++ K +G ASLSL+ F+ P I++L+VE+W +L P G+ +KPISL
Sbjct: 395 KLISCSPSKIPVSREPKNLGFASLSLKEFLFPVITQLSVEKWLELTPSKGSQTDTKPISL 454
Query: 457 RIAVSFTIPTLAPHLLRMVRSRPLSKSSCFFPLPGRIQPAKSWTRVIDETQSEVISLQMR 516
R+AVSFT P +P +L MV+SRP K SCFFP+ G+ + AKS T ++DETQ+EVI+LQ+R
Sbjct: 455 RVAVSFTPPVRSPSVLHMVQSRPSCKGSCFFPIIGKSRLAKSSTHIVDETQTEVITLQIR 514
Query: 517 DPKKEKGGDNCTLRKQVIGVTESGETITLAEMVETGWSVMDCCWSLKK--KSSKEGHLFE 574
+ GG ++QV+GVT+SGET LA + WS++D WSLK+ S+ + LFE
Sbjct: 515 N--SADGGILKDDQRQVMGVTDSGETRVLAVYTGSFWSLLDSKWSLKQINASTADNPLFE 572
Query: 575 LLGNRMINLFPGRKLDYEHKHCQKQRSEEDFVTAIEFSPADPYGKAIALLDLKSGVIKVK 634
+LG R++ +F GRKLDYE KHC RS+ DF+T +EFS PYGK + L+D++ G I+ K
Sbjct: 573 ILGPRVVKIFSGRKLDYEPKHCANLRSDLDFMTLVEFSKQHPYGKTVGLVDMRFGSIEAK 632
Query: 635 EEWFLLLGIISAFILSDALKEG-YDGFTANNEVMKE 669
E W LL GI+SAFIL LK+G +GF + +KE
Sbjct: 633 ENWLLLPGIVSAFILHTVLKKGGSEGFNVTTKDIKE 668
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| TAIR|locus:2121013 AT4G37900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| WB|WBGene00017980 F32B5.7 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| TAIR|locus:2011821 AT1G56230 "AT1G56230" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| CGD|CAL0005494 orf19.4880 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5AP84 YFW5 "Hypothetical YFW family protein 5" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| CGD|CAL0002220 orf19.6449 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5A314 YFW4 "Hypothetical YFW family protein 4" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| CGD|CAL0006251 orf19.4921 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5AL56 YFW1 "Hypothetical YFW family protein 1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 867 | |||
| pfam07173 | 137 | pfam07173, DUF1399, Protein of unknown function (D | 6e-56 | |
| pfam12810 | 248 | pfam12810, Gly_rich, Glycine rich protein | 6e-09 | |
| pfam01723 | 176 | pfam01723, Chorion_1, Chorion protein | 1e-08 | |
| pfam01723 | 176 | pfam01723, Chorion_1, Chorion protein | 2e-08 | |
| pfam01723 | 176 | pfam01723, Chorion_1, Chorion protein | 8e-08 | |
| pfam01723 | 176 | pfam01723, Chorion_1, Chorion protein | 9e-07 | |
| COG4278 | 269 | COG4278, COG4278, Uncharacterized conserved protei | 9e-07 | |
| pfam12810 | 248 | pfam12810, Gly_rich, Glycine rich protein | 1e-06 | |
| pfam11759 | 61 | pfam11759, KRTAP, Keratin-associated matrix | 1e-06 | |
| pfam07173 | 137 | pfam07173, DUF1399, Protein of unknown function (D | 4e-06 | |
| pfam05268 | 261 | pfam05268, GP38, Phage tail fibre adhesin Gp38 | 4e-06 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 5e-06 | |
| pfam11759 | 61 | pfam11759, KRTAP, Keratin-associated matrix | 9e-06 | |
| pfam07172 | 91 | pfam07172, GRP, Glycine rich protein family | 2e-05 | |
| PRK06958 | 182 | PRK06958, PRK06958, single-stranded DNA-binding pr | 2e-05 | |
| PRK06958 | 182 | PRK06958, PRK06958, single-stranded DNA-binding pr | 3e-05 | |
| COG4278 | 269 | COG4278, COG4278, Uncharacterized conserved protei | 4e-05 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 5e-05 | |
| PHA00370 | 297 | PHA00370, III, attachment protein | 5e-05 | |
| PTZ00146 | 293 | PTZ00146, PTZ00146, fibrillarin; Provisional | 6e-05 | |
| PHA00370 | 297 | PHA00370, III, attachment protein | 6e-05 | |
| PRK06958 | 182 | PRK06958, PRK06958, single-stranded DNA-binding pr | 1e-04 | |
| pfam12785 | 428 | pfam12785, VESA1_N, Variant erythrocyte surface an | 1e-04 | |
| COG4278 | 269 | COG4278, COG4278, Uncharacterized conserved protei | 2e-04 | |
| COG4278 | 269 | COG4278, COG4278, Uncharacterized conserved protei | 2e-04 | |
| pfam05268 | 261 | pfam05268, GP38, Phage tail fibre adhesin Gp38 | 5e-04 | |
| COG4278 | 269 | COG4278, COG4278, Uncharacterized conserved protei | 6e-04 | |
| pfam11759 | 61 | pfam11759, KRTAP, Keratin-associated matrix | 0.001 | |
| TIGR03601 | 79 | TIGR03601, B_an_ocin, probable heterocycle-contain | 0.001 | |
| TIGR03601 | 79 | TIGR03601, B_an_ocin, probable heterocycle-contain | 0.001 | |
| TIGR03601 | 79 | TIGR03601, B_an_ocin, probable heterocycle-contain | 0.002 | |
| pfam03940 | 48 | pfam03940, MSSP, Male specific sperm protein | 0.002 | |
| TIGR03601 | 79 | TIGR03601, B_an_ocin, probable heterocycle-contain | 0.003 | |
| pfam05710 | 90 | pfam05710, Coiled, Coiled coil | 0.003 | |
| TIGR03601 | 79 | TIGR03601, B_an_ocin, probable heterocycle-contain | 0.004 |
| >gnl|CDD|203591 pfam07173, DUF1399, Protein of unknown function (DUF1399) | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 6e-56
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 10/146 (6%)
Query: 99 QYKSDCEELYGKNLDNSYVVSSIQGT-CRKETEEIWNRLYPEEPYELDLAKISSEDFSAE 157
Y+ CE +G+ +++ + SI + ++W R YP EP+EL+L +S + +
Sbjct: 1 SYRRYCERRFGRLINHPSIEDSINEEYALHRSRKLWKRRYPREPFELNLISLSV-NGTGS 59
Query: 158 LSGLEKFTKYDLVSAVKRQSPFFYQVSRSHFNNDVFLEEAVARYKGFLHLIKKNRERSIK 217
L G DLV AVKRQS F Y+VS H + VFL EA+ARYK FL+L+KKN E+
Sbjct: 60 LIG------EDLVGAVKRQSRFVYKVSSPHISEGVFLIEALARYKRFLYLLKKNGEKC-- 111
Query: 218 RFCVPTYDIDLIWHTHQLHPDSYCKD 243
F VPT DIDL+WHTHQL+P Y D
Sbjct: 112 LFLVPTLDIDLMWHTHQLNPYGYFDD 137
|
This family represents a conserved region approximately 150 residues long within a number of hypothetical plant proteins of unknown function. Length = 137 |
| >gnl|CDD|221784 pfam12810, Gly_rich, Glycine rich protein | Back alignment and domain information |
|---|
| >gnl|CDD|216663 pfam01723, Chorion_1, Chorion protein | Back alignment and domain information |
|---|
| >gnl|CDD|216663 pfam01723, Chorion_1, Chorion protein | Back alignment and domain information |
|---|
| >gnl|CDD|216663 pfam01723, Chorion_1, Chorion protein | Back alignment and domain information |
|---|
| >gnl|CDD|216663 pfam01723, Chorion_1, Chorion protein | Back alignment and domain information |
|---|
| >gnl|CDD|226728 COG4278, COG4278, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|221784 pfam12810, Gly_rich, Glycine rich protein | Back alignment and domain information |
|---|
| >gnl|CDD|221210 pfam11759, KRTAP, Keratin-associated matrix | Back alignment and domain information |
|---|
| >gnl|CDD|203591 pfam07173, DUF1399, Protein of unknown function (DUF1399) | Back alignment and domain information |
|---|
| >gnl|CDD|147458 pfam05268, GP38, Phage tail fibre adhesin Gp38 | Back alignment and domain information |
|---|
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|221210 pfam11759, KRTAP, Keratin-associated matrix | Back alignment and domain information |
|---|
| >gnl|CDD|219320 pfam07172, GRP, Glycine rich protein family | Back alignment and domain information |
|---|
| >gnl|CDD|180777 PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|180777 PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226728 COG4278, COG4278, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|164795 PHA00370, III, attachment protein | Back alignment and domain information |
|---|
| >gnl|CDD|240291 PTZ00146, PTZ00146, fibrillarin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|164795 PHA00370, III, attachment protein | Back alignment and domain information |
|---|
| >gnl|CDD|180777 PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|221770 pfam12785, VESA1_N, Variant erythrocyte surface antigen-1 | Back alignment and domain information |
|---|
| >gnl|CDD|226728 COG4278, COG4278, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|226728 COG4278, COG4278, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|147458 pfam05268, GP38, Phage tail fibre adhesin Gp38 | Back alignment and domain information |
|---|
| >gnl|CDD|226728 COG4278, COG4278, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|221210 pfam11759, KRTAP, Keratin-associated matrix | Back alignment and domain information |
|---|
| >gnl|CDD|234276 TIGR03601, B_an_ocin, probable heterocycle-containing bacteriocin, BA_2677 family | Back alignment and domain information |
|---|
| >gnl|CDD|234276 TIGR03601, B_an_ocin, probable heterocycle-containing bacteriocin, BA_2677 family | Back alignment and domain information |
|---|
| >gnl|CDD|234276 TIGR03601, B_an_ocin, probable heterocycle-containing bacteriocin, BA_2677 family | Back alignment and domain information |
|---|
| >gnl|CDD|112739 pfam03940, MSSP, Male specific sperm protein | Back alignment and domain information |
|---|
| >gnl|CDD|234276 TIGR03601, B_an_ocin, probable heterocycle-containing bacteriocin, BA_2677 family | Back alignment and domain information |
|---|
| >gnl|CDD|218712 pfam05710, Coiled, Coiled coil | Back alignment and domain information |
|---|
| >gnl|CDD|234276 TIGR03601, B_an_ocin, probable heterocycle-containing bacteriocin, BA_2677 family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 867 | |||
| PF07173 | 136 | DUF1399: Protein of unknown function (DUF1399); In | 100.0 | |
| PF07173 | 136 | DUF1399: Protein of unknown function (DUF1399); In | 99.81 | |
| COG4278 | 269 | Uncharacterized conserved protein [Function unknow | 98.85 | |
| TIGR03601 | 79 | B_an_ocin probable heterocycle-containing bacterio | 98.09 | |
| TIGR03601 | 79 | B_an_ocin probable heterocycle-containing bacterio | 97.89 | |
| PRK10737 | 196 | FKBP-type peptidyl-prolyl cis-trans isomerase; Pro | 97.88 | |
| COG1047 | 174 | SlpA FKBP-type peptidyl-prolyl cis-trans isomerase | 97.73 | |
| cd04042 | 121 | C2A_MCTP_PRT C2 domain first repeat found in Multi | 97.29 | |
| cd08678 | 126 | C2_C21orf25-like C2 domain found in the Human chro | 97.21 | |
| cd04013 | 146 | C2_SynGAP_like C2 domain present in Ras GTPase act | 97.15 | |
| cd08400 | 126 | C2_Ras_p21A1 C2 domain present in RAS p21 protein | 97.02 | |
| PRK15095 | 156 | FKBP-type peptidyl-prolyl cis-trans isomerase; Pro | 96.78 | |
| cd08682 | 126 | C2_Rab11-FIP_classI C2 domain found in Rab11-famil | 96.36 | |
| cd04015 | 158 | C2_plant_PLD C2 domain present in plant phospholip | 96.33 | |
| cd08373 | 127 | C2A_Ferlin C2 domain first repeat in Ferlin. Ferli | 96.12 | |
| cd04043 | 126 | C2_Munc13_fungal C2 domain in Munc13 (mammalian un | 96.01 | |
| cd04019 | 150 | C2C_MCTP_PRT_plant C2 domain third repeat found in | 96.0 | |
| cd04050 | 105 | C2B_Synaptotagmin-like C2 domain second repeat pre | 95.86 | |
| cd08681 | 118 | C2_fungal_Inn1p-like C2 domain found in fungal Ing | 95.74 | |
| cd04016 | 121 | C2_Tollip C2 domain present in Toll-interacting pr | 95.53 | |
| cd08688 | 110 | C2_KIAA0528-like C2 domain found in the Human KIAA | 95.47 | |
| cd08382 | 123 | C2_Smurf-like C2 domain present in Smad ubiquitina | 95.42 | |
| cd04033 | 133 | C2_NEDD4_NEDD4L C2 domain present in the Human neu | 95.27 | |
| cd08385 | 124 | C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe | 95.26 | |
| cd08376 | 116 | C2B_MCTP_PRT C2 domain second repeat found in Mult | 95.18 | |
| cd08378 | 121 | C2B_MCTP_PRT_plant C2 domain second repeat found i | 95.0 | |
| cd04024 | 128 | C2A_Synaptotagmin-like C2 domain first repeat pres | 94.95 | |
| cd04014 | 132 | C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) | 94.89 | |
| cd04022 | 127 | C2A_MCTP_PRT_plant C2 domain first repeat found in | 94.8 | |
| cd08387 | 124 | C2A_Synaptotagmin-8 C2A domain first repeat presen | 94.8 | |
| cd04011 | 111 | C2B_Ferlin C2 domain second repeat in Ferlin. Ferl | 94.68 | |
| cd04044 | 124 | C2A_Tricalbin-like C2 domain first repeat present | 94.4 | |
| cd04036 | 119 | C2_cPLA2 C2 domain present in cytosolic PhosphoLip | 94.39 | |
| cd08379 | 126 | C2D_MCTP_PRT_plant C2 domain fourth repeat found i | 94.2 | |
| cd08394 | 127 | C2A_Munc13 C2 domain first repeat in Munc13 (mamma | 94.12 | |
| cd04029 | 125 | C2A_SLP-4_5 C2 domain first repeat present in Syna | 94.07 | |
| cd04031 | 125 | C2A_RIM1alpha C2 domain first repeat contained in | 93.98 | |
| cd08386 | 125 | C2A_Synaptotagmin-7 C2A domain first repeat presen | 93.94 | |
| cd08391 | 121 | C2A_C2C_Synaptotagmin_like C2 domain first and thi | 93.94 | |
| cd08409 | 137 | C2B_Synaptotagmin-15 C2 domain second repeat prese | 93.88 | |
| cd04030 | 127 | C2C_KIAA1228 C2 domain third repeat present in unc | 93.75 | |
| cd04040 | 115 | C2D_Tricalbin-like C2 domain fourth repeat present | 93.66 | |
| cd04041 | 111 | C2A_fungal C2 domain first repeat; fungal group. C | 93.6 | |
| cd08390 | 123 | C2A_Synaptotagmin-15-17 C2A domain first repeat pr | 93.6 | |
| cd04051 | 125 | C2_SRC2_like C2 domain present in Soybean genes Re | 93.59 | |
| cd08388 | 128 | C2A_Synaptotagmin-4-11 C2A domain first repeat pre | 93.54 | |
| cd08675 | 137 | C2B_RasGAP C2 domain second repeat of Ras GTPase a | 93.49 | |
| cd08393 | 125 | C2A_SLP-1_2 C2 domain first repeat present in Syna | 93.49 | |
| cd08389 | 124 | C2A_Synaptotagmin-14_16 C2A domain first repeat pr | 93.43 | |
| cd04021 | 125 | C2_E3_ubiquitin_ligase C2 domain present in E3 ubi | 93.43 | |
| cd04045 | 120 | C2C_Tricalbin-like C2 domain third repeat present | 93.03 | |
| cd04049 | 124 | C2_putative_Elicitor-responsive_gene C2 domain pre | 92.96 | |
| cd00276 | 134 | C2B_Synaptotagmin C2 domain second repeat present | 92.72 | |
| cd08383 | 117 | C2A_RasGAP C2 domain (first repeat) of Ras GTPase | 92.62 | |
| cd04010 | 148 | C2B_RasA3 C2 domain second repeat present in RAS p | 92.38 | |
| cd08685 | 119 | C2_RGS-like C2 domain of the Regulator Of G-Protei | 92.35 | |
| cd08392 | 128 | C2A_SLP-3 C2 domain first repeat present in Synapt | 92.21 | |
| cd08408 | 138 | C2B_Synaptotagmin-14_16 C2 domain second repeat pr | 91.94 | |
| cd04026 | 131 | C2_PKC_alpha_gamma C2 domain in Protein Kinase C ( | 91.89 | |
| cd04025 | 123 | C2B_RasA1_RasA4 C2 domain second repeat present in | 91.44 | |
| cd08381 | 122 | C2B_PI3K_class_II C2 domain second repeat present | 91.44 | |
| COG4278 | 269 | Uncharacterized conserved protein [Function unknow | 91.42 | |
| cd04028 | 146 | C2B_RIM1alpha C2 domain second repeat contained in | 91.06 | |
| cd08375 | 136 | C2_Intersectin C2 domain present in Intersectin. A | 90.85 | |
| cd04054 | 121 | C2A_Rasal1_RasA4 C2 domain first repeat present in | 90.85 | |
| cd00030 | 102 | C2 C2 domain. The C2 domain was first identified i | 90.84 | |
| KOG0544 | 108 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 90.69 | |
| cd08377 | 119 | C2C_MCTP_PRT C2 domain third repeat found in Multi | 89.96 | |
| cd04035 | 123 | C2A_Rabphilin_Doc2 C2 domain first repeat present | 89.94 | |
| cd08406 | 136 | C2B_Synaptotagmin-12 C2 domain second repeat prese | 89.92 | |
| PLN03008 | 868 | Phospholipase D delta | 89.79 | |
| cd04046 | 126 | C2_Calpain C2 domain present in Calpain proteins. | 89.76 | |
| cd08521 | 123 | C2A_SLP C2 domain first repeat present in Synaptot | 89.74 | |
| PLN02270 | 808 | phospholipase D alpha | 89.48 | |
| cd04052 | 111 | C2B_Tricalbin-like C2 domain second repeat present | 89.47 | |
| cd04047 | 110 | C2B_Copine C2 domain second repeat in Copine. Ther | 89.46 | |
| cd08402 | 136 | C2B_Synaptotagmin-1 C2 domain second repeat presen | 89.3 | |
| cd00275 | 128 | C2_PLC_like C2 domain present in Phosphoinositide- | 88.84 | |
| cd04017 | 135 | C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl | 88.84 | |
| smart00239 | 101 | C2 Protein kinase C conserved region 2 (CalB). Ca2 | 88.25 | |
| cd08691 | 137 | C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li | 87.13 | |
| cd08676 | 153 | C2A_Munc13-like C2 domain first repeat in Munc13 ( | 86.86 | |
| cd04032 | 127 | C2_Perforin C2 domain of Perforin. Perforin contai | 86.09 | |
| cd08405 | 136 | C2B_Synaptotagmin-7 C2 domain second repeat presen | 85.58 | |
| cd08395 | 120 | C2C_Munc13 C2 domain third repeat in Munc13 (mamma | 85.55 | |
| cd08384 | 133 | C2B_Rabphilin_Doc2 C2 domain second repeat present | 85.47 | |
| cd04027 | 127 | C2B_Munc13 C2 domain second repeat in Munc13 (mamm | 85.33 | |
| PF00254 | 94 | FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer | 85.1 | |
| cd04020 | 162 | C2B_SLP_1-2-3-4 C2 domain second repeat present in | 85.04 | |
| TIGR03516 | 177 | ppisom_GldI peptidyl-prolyl isomerase, gliding mot | 85.01 | |
| cd08403 | 134 | C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe | 84.67 | |
| cd08680 | 124 | C2_Kibra C2 domain found in Human protein Kibra. K | 84.39 | |
| cd04038 | 145 | C2_ArfGAP C2 domain present in Arf GTPase Activati | 83.95 | |
| PF00168 | 85 | C2: C2 domain; InterPro: IPR000008 The C2 domain i | 82.55 | |
| cd04018 | 151 | C2C_Ferlin C2 domain third repeat in Ferlin. Ferli | 82.47 | |
| cd08401 | 121 | C2A_RasA2_RasA3 C2 domain first repeat present in | 82.43 | |
| cd08404 | 136 | C2B_Synaptotagmin-4 C2 domain second repeat presen | 81.95 | |
| cd04009 | 133 | C2B_Munc13-like C2 domain second repeat in Munc13 | 80.61 | |
| cd08690 | 155 | C2_Freud-1 C2 domain found in 5' repressor element | 80.5 |
| >PF07173 DUF1399: Protein of unknown function (DUF1399); InterPro: IPR009836 This family represents a conserved region approximately 150 residues long within a number of hypothetical plant proteins of unknown function | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=283.34 Aligned_cols=135 Identities=45% Similarity=0.845 Sum_probs=122.8
Q ss_pred hHHHHHHHHhCCcCCCCCcccccccc-hhhhhHHHhhhhCCCCccccccccccCcccccccccccchhhhhHHHHHHhhh
Q 002906 99 QYKSDCEELYGKNLDNSYVVSSIQGT-CRKETEEIWNRLYPEEPYELDLAKISSEDFSAELSGLEKFTKYDLVSAVKRQS 177 (867)
Q Consensus 99 ~Y~~dC~~~~Grvid~~~i~~~~~~~-~~~~t~~~W~~~yP~ePfdl~~~~~~~~~i~~~~~~~~~~is~DLVaAV~RQ~ 177 (867)
+|++||+++|||+|+++.+.+.+++. +..+++++|+.+||.|||++++..... .....++++||++||+||.
T Consensus 1 ~Y~~~C~~~~grii~~~~~~~~~~~~~a~~~~~~~w~~~~p~e~~~~~~~~~~~-------~~~~~~~~~DLv~av~Rq~ 73 (136)
T PF07173_consen 1 SYRKDCERRFGRIIDHPSISDSINEVYAKNRCRKIWQARYPREPFDLNLISMTV-------WSNGIPISYDLVAAVKRQS 73 (136)
T ss_pred ChHHHHHHHhchhcCCCchhHHHHHHHHHhhhHHHHHHhCCCchHhhhhhhccc-------ccccccchHHHHHHHHHHH
Confidence 59999999999999999999888876 899999999999999999987765443 1125678999999999999
Q ss_pred hHHHHhccccCCcHHHHHHHHHHHHHHHHHHhhcccccccccccCchhHHHHHhhcccChhhHHHH
Q 002906 178 PFFYQVSRSHFNNDVFLEEAVARYKGFLHLIKKNRERSIKRFCVPTYDIDLIWHTHQLHPDSYCKD 243 (867)
Q Consensus 178 sF~~qv~sP~~~d~~fL~rAi~RYkrFL~Lik~~p~~~~~~~LVPTlDIDLVWHTHQL~P~~Y~~D 243 (867)
.|+++|++|++.+..||.+|++||++||.|++.++++ .+||||+|||||||||||+|+.|++|
T Consensus 74 ~F~~~~~~p~~~~~~~l~~A~~RY~~Fl~l~~~~~~~---~~lVPtlDIdLvWHTHqL~p~~Y~~D 136 (136)
T PF07173_consen 74 SFVYKMSSPHLSETVFLERAIRRYKRFLDLLKKYPDK---SFLVPTLDIDLVWHTHQLNPVSYRED 136 (136)
T ss_pred HHHHHHccHhhcCcHHHHHHHHHHHHHHHHHHhCCCC---CCCCChHHHHHHHHHhccCchhccCC
Confidence 9999999999999999999999999999999999863 48999999999999999999999876
|
|
| >PF07173 DUF1399: Protein of unknown function (DUF1399); InterPro: IPR009836 This family represents a conserved region approximately 150 residues long within a number of hypothetical plant proteins of unknown function | Back alignment and domain information |
|---|
| >COG4278 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR03601 B_an_ocin probable heterocycle-containing bacteriocin, BA_2677 family | Back alignment and domain information |
|---|
| >TIGR03601 B_an_ocin probable heterocycle-containing bacteriocin, BA_2677 family | Back alignment and domain information |
|---|
| >PRK10737 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional | Back alignment and domain information |
|---|
| >COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
| >cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein | Back alignment and domain information |
|---|
| >cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family | Back alignment and domain information |
|---|
| >cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1) | Back alignment and domain information |
|---|
| >PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional | Back alignment and domain information |
|---|
| >cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I | Back alignment and domain information |
|---|
| >cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD) | Back alignment and domain information |
|---|
| >cd08373 C2A_Ferlin C2 domain first repeat in Ferlin | Back alignment and domain information |
|---|
| >cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group | Back alignment and domain information |
|---|
| >cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
| >cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins | Back alignment and domain information |
|---|
| >cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip) | Back alignment and domain information |
|---|
| >cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone | Back alignment and domain information |
|---|
| >cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins | Back alignment and domain information |
|---|
| >cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42) | Back alignment and domain information |
|---|
| >cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
| >cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
| >cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
| >cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon | Back alignment and domain information |
|---|
| >cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
| >cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8 | Back alignment and domain information |
|---|
| >cd04011 C2B_Ferlin C2 domain second repeat in Ferlin | Back alignment and domain information |
|---|
| >cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
| >cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) | Back alignment and domain information |
|---|
| >cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
| >cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
| >cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5 | Back alignment and domain information |
|---|
| >cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
| >cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
| >cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15 | Back alignment and domain information |
|---|
| >cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins | Back alignment and domain information |
|---|
| >cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
| >cd04041 C2A_fungal C2 domain first repeat; fungal group | Back alignment and domain information |
|---|
| >cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17 | Back alignment and domain information |
|---|
| >cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins | Back alignment and domain information |
|---|
| >cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11 | Back alignment and domain information |
|---|
| >cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
| >cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2 | Back alignment and domain information |
|---|
| >cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
| >cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase | Back alignment and domain information |
|---|
| >cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
| >cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene | Back alignment and domain information |
|---|
| >cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
| >cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
| >cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3) | Back alignment and domain information |
|---|
| >cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family | Back alignment and domain information |
|---|
| >cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3 | Back alignment and domain information |
|---|
| >cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
| >cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
| >cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
| >cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
| >COG4278 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
| >cd08375 C2_Intersectin C2 domain present in Intersectin | Back alignment and domain information |
|---|
| >cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
| >cd00030 C2 C2 domain | Back alignment and domain information |
|---|
| >KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
| >cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
| >cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12 | Back alignment and domain information |
|---|
| >PLN03008 Phospholipase D delta | Back alignment and domain information |
|---|
| >cd04046 C2_Calpain C2 domain present in Calpain proteins | Back alignment and domain information |
|---|
| >cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
| >PLN02270 phospholipase D alpha | Back alignment and domain information |
|---|
| >cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
| >cd04047 C2B_Copine C2 domain second repeat in Copine | Back alignment and domain information |
|---|
| >cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1 | Back alignment and domain information |
|---|
| >cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
| >cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin | Back alignment and domain information |
|---|
| >smart00239 C2 Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
| >cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1) | Back alignment and domain information |
|---|
| >cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
| >cd04032 C2_Perforin C2 domain of Perforin | Back alignment and domain information |
|---|
| >cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
| >cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
| >cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
| >cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
| >PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5 | Back alignment and domain information |
|---|
| >cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4 | Back alignment and domain information |
|---|
| >TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated | Back alignment and domain information |
|---|
| >cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
| >cd08680 C2_Kibra C2 domain found in Human protein Kibra | Back alignment and domain information |
|---|
| >cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
| >PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking | Back alignment and domain information |
|---|
| >cd04018 C2C_Ferlin C2 domain third repeat in Ferlin | Back alignment and domain information |
|---|
| >cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3 | Back alignment and domain information |
|---|
| >cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4 | Back alignment and domain information |
|---|
| >cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
| >cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1) | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 78.0 bits (191), Expect = 8e-15
Identities = 98/696 (14%), Positives = 197/696 (28%), Gaps = 233/696 (33%)
Query: 91 HCHRL----NPVQYK-----SDCEELYGKNLDNSYVVSSIQGT-CRKETEEIWNRLYPEE 140
H H + QY+ S E+ + N D V + ++E + I
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS 62
Query: 141 P--YELDLAKISSEDFSAELSGLEKFTK------YD-LVSAVKRQS--P------FFYQV 183
E ++KF + Y L+S +K + P + Q
Sbjct: 63 GTLRLFWTLLSKQE------EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 184 SRSHFNNDVFLEEAVARYKGFLHLIKKNRE-------------------------RSIKR 218
R + +N VF + V+R + +L L + E S K
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 219 FCVPTYDIDLIWHT--HQLHPDSYCKDMSKTLGKVLEHDDMDQ-DRTKGKKLDTGFSGTT 275
C + I W + P++ +M + L ++ + + D + KL +
Sbjct: 177 QCKMDFKI--FWLNLKNCNSPET-VLEMLQKLLYQIDPNWTSRSDHSSNIKLRI---HSI 230
Query: 276 KQWEETF--GSRYPKAGAMYRGTAPSPLTTIPFSSDIVSKEVVSS--KECQKIINIPDLK 331
+ Y L + ++ + + ++ C+ ++ +
Sbjct: 231 QAELRRLLKSKPYENC-----------LLVL---LNVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 332 IVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKS-GMKQVASFQC 390
+ + F+ ++ DH + ++L K +
Sbjct: 277 VTD-FLSAATTTHISLDHHSMT--------------LTPDEVKSLLLKYLDCR------- 314
Query: 391 EATGELLFELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVS 450
+L E+++ + ++ + S+++ ++ + W +V+
Sbjct: 315 --PQDLPREVLTTNPRRLSIIAE---------SIRDGLATW-----DNW-------KHVN 351
Query: 451 SKPISLRIAVSFTIPTLAPHLLRMVRSRPLSKSSCF-----FPLPGRIQPAKS----WTR 501
++ I S + L P R F FP I P W
Sbjct: 352 CDKLTTIIESS--LNVLEPAEYR----------KMFDRLSVFPPSAHI-PTILLSLIWFD 398
Query: 502 VIDETQSEVI------SLQMRDPKKEKGGDNCTLRKQVIGVTESGETITLAEMVETGWSV 555
VI V+ SL + PK+ TI++
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKE--------------------STISI---------- 428
Query: 556 MDCCWSLKKKSSKEG--HLFELLGNRMINLF-PGRKLDYEHK---------------HCQ 597
LK K E H +++ + + D + H +
Sbjct: 429 PSIYLELKVKLENEYALH------RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482
Query: 598 KQRSEEDFVTAIEFSPADPYGKAIALLD---LKSGVIKVKEEWFLLLGIISAFILSDALK 654
E F + LD L+ + W I++ L LK
Sbjct: 483 NIEHPERMT---LFR--------MVFLDFRFLEQKIRHDSTAWNASGSILN--TLQQ-LK 528
Query: 655 EGYDGFTANNEVMKEM--KSASDSVEGLQEEGICTK 688
Y + +N+ E + D + ++E IC+K
Sbjct: 529 F-YKPYICDNDPKYERLVNAILDFLPKIEENLICSK 563
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein domain, chitin-binding, GERM agglutinin, chitin-binding protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum} PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A 9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A* 2x52_A* 1t0w_A* Length = 171 | Back alignment and structure |
|---|
| >2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein domain, chitin-binding, GERM agglutinin, chitin-binding protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum} PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A 9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A* 2x52_A* 1t0w_A* Length = 171 | Back alignment and structure |
|---|
| >2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein domain, chitin-binding, GERM agglutinin, chitin-binding protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum} PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A 9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A* 2x52_A* 1t0w_A* Length = 171 | Back alignment and structure |
|---|
| >2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein domain, chitin-binding, GERM agglutinin, chitin-binding protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum} PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A 9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A* 2x52_A* 1t0w_A* Length = 171 | Back alignment and structure |
|---|
| >2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} Length = 196 | Back alignment and structure |
|---|
| >2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} Length = 196 | Back alignment and structure |
|---|
| >2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} Length = 196 | Back alignment and structure |
|---|
| >2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} Length = 196 | Back alignment and structure |
|---|
| >2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} Length = 196 | Back alignment and structure |
|---|
| >3i08_A Neurogenic locus notch homolog protein 1; SEA domain, LIN-12 notch repeat, LNR, heterodimerization domain, HD, activator, ANK repeat, calcium; 3.20A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
| >1ulk_A Lectin-C; chitin-binding protein, hevein domain, PL-C, sugar binding protein; 1.80A {Phytolacca americana} SCOP: g.3.1.1 g.3.1.1 g.3.1.1 Length = 126 | Back alignment and structure |
|---|
| >3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G* Length = 562 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >1en2_A UDA, agglutinin isolectin I/agglutinin isolectin V/ AG isolectin VI; hevein domain, superantigen, saccharide binding binding protein; HET: NAG; 1.40A {Urtica dioica} SCOP: g.3.1.1 g.3.1.1 PDB: 1eis_A* 1enm_A* 1ehd_A 1ehh_A* 1iqb_A Length = 89 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 867 | |||
| 2kfw_A | 196 | FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD | 98.27 | |
| 2kr7_A | 151 | FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; | 97.04 | |
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 97.03 | |
| 4dt4_A | 169 | FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; | 96.99 | |
| 2k8i_A | 171 | SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, | 96.96 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 96.88 | |
| 1ix5_A | 151 | FKBP; ppiase, isomerase; NMR {Methanothermococcust | 96.22 | |
| 3f04_A | 143 | Synaptotagmin-1; C2A, calcium, cell junction, cyto | 96.22 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 96.18 | |
| 3pr9_A | 157 | FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB | 96.16 | |
| 2d8k_A | 141 | Synaptotagmin VII; exocytosis, calcium binding, ly | 96.16 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 96.06 | |
| 3kwu_A | 148 | MUNC13-1; calcium binding protein, phospholipid bi | 96.04 | |
| 2b3r_A | 134 | Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA | 95.93 | |
| 1v27_A | 141 | Regulating synaptic membrane exocytosis protein 2; | 95.78 | |
| 3cgm_A | 158 | SLYD, peptidyl-prolyl CIS-trans isomerase; chapero | 95.77 | |
| 2dmg_A | 142 | KIAA1228 protein; beta-sandwich, structural genomi | 95.67 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 95.61 | |
| 3prb_A | 231 | FKBP-type peptidyl-prolyl CIS-trans isomerase; cha | 95.6 | |
| 1rsy_A | 152 | Synaptotagmin I; calcium/phospholipid binding prot | 95.48 | |
| 2enp_A | 147 | B/K protein; C2 type 1,beta sandwich, structural g | 95.46 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 95.4 | |
| 3fdw_A | 148 | Synaptotagmin-like protein 4; structural genomics, | 95.34 | |
| 1a25_A | 149 | CALB, protein kinase C (beta); calcium++/phospholi | 95.32 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 95.31 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 95.29 | |
| 3fbk_A | 153 | RGS3, RGP3, regulator of G-protein signaling 3; al | 95.15 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 95.15 | |
| 3pyc_A | 132 | E3 ubiquitin-protein ligase smurf1; phospholipid b | 95.05 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 94.82 | |
| 3rdl_A | 137 | Protein kinase C alpha type; protein kinase PKC, t | 94.78 | |
| 2q3x_A | 171 | Regulating synaptic membrane exocytosis protein 1; | 94.77 | |
| 1ugk_A | 138 | Synaptotagmin IV, KIAA1342; beta sandwich, structu | 94.72 | |
| 1w15_A | 153 | Synaptotagmin IV; metal binding protein, endocytos | 94.51 | |
| 3n5a_A | 138 | Synaptotagmin-7; calcium/phospholipid binding prot | 94.29 | |
| 2bwq_A | 129 | Regulating synaptic membrane exocytosis protein 2; | 94.26 | |
| 2cm5_A | 166 | Rabphilin-3A; protein transport, zinc-finger, Ca2+ | 94.12 | |
| 1tjx_A | 159 | Similar to synaptotagmini/P65; C2B domain, calcium | 94.05 | |
| 2z0u_A | 155 | WW domain-containing protein 1; C2 domain, alterna | 93.64 | |
| 1rh8_A | 142 | Piccolo protein; beta-sandwich, metal binding prot | 93.59 | |
| 3o5q_A | 128 | Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 | 93.43 | |
| 1r9h_A | 135 | FKB-6, FK506 binding protein family; structural ge | 92.96 | |
| 2pbc_A | 102 | FK506-binding protein 2; endoplasmic reticulum, is | 92.94 | |
| 3o5e_A | 144 | Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 | 92.87 | |
| 2vn1_A | 129 | 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR | 92.32 | |
| 1yat_A | 113 | FK506 binding protein; HET: FK5; 2.50A {Saccharomy | 91.77 | |
| 2ppn_A | 107 | FK506-binding protein 1A; high resolution protein | 91.59 | |
| 1wfm_A | 138 | Synaptotagmin XIII; C2 domain, exocytosis, neurotr | 91.43 | |
| 2chd_A | 142 | Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium | 91.17 | |
| 4dip_A | 125 | Peptidyl-prolyl CIS-trans isomerase FKBP14; struct | 91.04 | |
| 3kz7_A | 119 | FK506-binding protein 3; FKPB ppiase rapamycin, is | 91.01 | |
| 2lgo_A | 130 | FKBP; infectious disease, isomerase, giardiasis, s | 90.56 | |
| 2y78_A | 133 | Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, | 90.56 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 90.04 | |
| 3b7x_A | 134 | FK506-binding protein 6; isomerase, repeat, rotama | 89.9 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 88.5 | |
| 1hxv_A | 113 | Trigger factor; FKBP fold, ppiase, chaperone; NMR | 87.94 | |
| 2lkn_A | 165 | AH receptor-interacting protein; FKBP-type domain, | 87.74 | |
| 3uf8_A | 209 | Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- | 87.25 | |
| 2f4e_A | 180 | ATFKBP42; FKBP-like, alpha-beta, signaling protein | 87.0 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 86.54 | |
| 1u79_A | 129 | FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T | 86.15 | |
| 2d9f_A | 135 | FK506-binding protein 8 variant; FKBP, rapamycin, | 86.06 | |
| 2awg_A | 118 | 38 kDa FK-506 binding protein; FKBP-type, ppiase, | 85.14 | |
| 3l9b_A | 144 | Otoferlin; C2-domain, beta-sheets, cell membrane, | 84.97 | |
| 1q1c_A | 280 | FK506-binding protein 4; rotamase, TPR repeat, nuc | 84.48 | |
| 3jxv_A | 356 | 70 kDa peptidyl-prolyl isomerase; FKBP- binding do | 84.18 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 83.34 | |
| 2cjs_A | 167 | UNC-13 homolog A, MUNC13-1; neurotransmitter trans | 82.87 | |
| 3oe2_A | 219 | Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, | 81.93 | |
| 2jwx_A | 157 | FKBP38NTD, FK506-binding protein 8 variant; apopto | 81.42 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 80.81 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 80.7 |
| >2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.27 E-value=7.8e-07 Score=90.32 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=57.9
Q ss_pred CCCcceeec-CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce--eEEEeccCccEEE
Q 002906 568 KEGHLFELL-GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA--IALLDLKSGVIKV 633 (867)
Q Consensus 568 ~dg~l~El~-~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea--~aLldL~ke~FeV 633 (867)
.+|++|+.+ +.+|+.|+.|.+++ ||+. +.+++.|+.+ .|+++|+++||++ .+|+.++++.|.-
T Consensus 18 ~dG~~fdss~~~~P~~f~lG~g~vipG~eea-L~Gm~vGe~~--~v~Ippe~aYGe~~~~lV~~vp~~~f~~ 86 (196)
T 2kfw_A 18 EDGVLVDESPVSAPLDYLHGHGSLISGLETA-LEGHEVGDKF--DVAVGANDAYGQYDENLVQRVPKDVFMG 86 (196)
T ss_dssp TTTEEEEECCTTSCCEEESSSSSSCHHHHHH-HSSSCTTCEE--EEECSTTTTSSCCCTTTCEEECGGGCCC
T ss_pred CCCCEEEecCCCCCEEEEECCCCcchHHHHH-HcCCCCCCEE--EEEeCcHHhcCCCChhhEEEEEHHHCCC
Confidence 579999998 66999999998877 9999 9999999999 9999999999999 8999999999953
|
| >2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori} | Back alignment and structure |
|---|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli} | Back alignment and structure |
|---|
| >2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli} | Back alignment and structure |
|---|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A | Back alignment and structure |
|---|
| >1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1 | Back alignment and structure |
|---|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* | Back alignment and structure |
|---|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A | Back alignment and structure |
|---|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A* | Back alignment and structure |
|---|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} | Back alignment and structure |
|---|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A* | Back alignment and structure |
|---|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A | Back alignment and structure |
|---|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0 | Back alignment and structure |
|---|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A | Back alignment and structure |
|---|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A | Back alignment and structure |
|---|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} | Back alignment and structure |
|---|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A | Back alignment and structure |
|---|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* | Back alignment and structure |
|---|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A | Back alignment and structure |
|---|
| >1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 | Back alignment and structure |
|---|
| >2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A | Back alignment and structure |
|---|
| >2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A | Back alignment and structure |
|---|
| >1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 | Back alignment and structure |
|---|
| >2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ... | Back alignment and structure |
|---|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A | Back alignment and structure |
|---|
| >4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
| >3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A* | Back alignment and structure |
|---|
| >2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} | Back alignment and structure |
|---|
| >2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* | Back alignment and structure |
|---|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
| >3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1 | Back alignment and structure |
|---|
| >2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A* | Back alignment and structure |
|---|
| >2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
| >1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A | Back alignment and structure |
|---|
| >2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A | Back alignment and structure |
|---|
| >3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A | Back alignment and structure |
|---|
| >3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A | Back alignment and structure |
|---|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
| >3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0 | Back alignment and structure |
|---|
| >2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 867 | |||
| d1gmia_ | 136 | Domain from protein kinase C epsilon {Rat (Rattus | 97.2 | |
| d1ix5a_ | 151 | Archaeal FKBP {Archaeon Methanococcus thermolithot | 96.86 | |
| d2cjta1 | 128 | Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: | 96.75 | |
| d1wfma_ | 138 | Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9 | 96.38 | |
| d1rlwa_ | 126 | Domain from cytosolic phospholipase A2 {Human (Hom | 96.24 | |
| d1uowa_ | 157 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 96.23 | |
| d1rsya_ | 143 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 96.18 | |
| d1wfja_ | 136 | C2 domain protein At1g63220 {Thale cress (Arabidop | 95.8 | |
| d1dqva1 | 130 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 95.68 | |
| d2cm5a1 | 137 | C2b-domain of rabphilin {Rat (Rattus norvegicus) [ | 95.15 | |
| d2ep6a1 | 126 | Multiple C2 and transmembrane domain-containing pr | 94.97 | |
| d1ugka_ | 138 | Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960 | 94.46 | |
| d1a25a_ | 132 | C2 domain from protein kinase c (beta) {Rat (Rattu | 94.37 | |
| d2nq3a1 | 133 | E3 ubiquitin-protein ligase Itchy {Human (Homo sap | 94.34 | |
| d1w15a_ | 138 | Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: | 94.33 | |
| d1dqva2 | 145 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 93.38 | |
| d1qasa2 | 131 | PI-specific phospholipase C isozyme D1 (PLC-D1), C | 93.37 | |
| d2bwqa1 | 125 | Regulating synaptic membrane exocytosis protein, r | 93.24 | |
| d1rh8a_ | 142 | Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | 92.63 | |
| d1q1ca1 | 120 | FKBP52, N-terminal domains {Human (Homo sapiens) [ | 87.73 | |
| d2ppna1 | 107 | FK-506 binding protein (FKBP12), an immunophilin { | 87.21 | |
| d1kt1a2 | 111 | FKBP51, N-terminal domains {Monkey (Saimiri bolivi | 86.92 | |
| d1r9ha_ | 118 | FKB-6, N-terminal domain {Caenorhabditis elegans [ | 86.3 | |
| d1pbka_ | 116 | FKBP25 {Human (Homo sapiens) [TaxId: 9606]} | 85.85 | |
| d1yata_ | 113 | Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc | 81.75 |
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C epsilon species: Rat (Rattus rattus) [TaxId: 10117]
Probab=97.20 E-value=0.0017 Score=58.89 Aligned_cols=113 Identities=9% Similarity=0.124 Sum_probs=76.2
Q ss_pred EEEEeeeccCCCcc------------ccCCCceEEEEeccCCCcccccccce-eeeecccceeeEEEEeeecceEEEEEE
Q 002906 335 VFVEIVAVKNLPED------------HKDKGDLFVFFSKSQPDIFFNAKQKL-TILSKSGMKQVASFQCEATGELLFELV 401 (867)
Q Consensus 335 v~~~iv~~~n~p~~------------~k~~~~~fvr~~~~q~d~~~~~~~~~-~~~s~~~~k~~~~~qCE~t~~l~lel~ 401 (867)
+-|.|+.+++|+.. .....+-||.++- |.....+.++ .=+.+|.|++...|..+....|.|+|.
T Consensus 8 L~v~I~~A~~L~~~~~~~~~~~~~~~~~~~~DPYv~v~l---~~~~~~~T~~~~~t~~P~Wne~f~f~v~~~~~l~i~V~ 84 (136)
T d1gmia_ 8 LKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNV---DDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAVF 84 (136)
T ss_dssp EEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEE---TTEEEEECCCCSSCSSCEEEEEEEEEEEEECEEEEEEE
T ss_pred EEEEEEEeECCCcccccccccccccCCCCCcCcEEEEEe---CCCcCcEeeEEcCCCCccCccEEEEEEecCCceEEEEE
Confidence 45667888888753 1222356888772 2111111111 223567888877787777788889988
Q ss_pred eeCCCcccccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeecC
Q 002906 402 SHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (867)
Q Consensus 402 ~~~~~~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~Tp 464 (867)
.+.. +.+.++||.++|++.+|+... ....+.||+|.|. =+++|.+++||
T Consensus 85 d~~~-----~~~d~~iG~~~i~l~~l~~~~-~~~~~~w~~L~p~--------G~v~l~v~~~~ 133 (136)
T d1gmia_ 85 HDAP-----IGYDDFVANCTIQFEELLQNG-SRHFEDWIDLEPE--------GKVYVIIDLSG 133 (136)
T ss_dssp ECCS-----SSSCEEEEEEEEEHHHHTSTT-CSEEEEEEECBSS--------CEEEEEEEEEE
T ss_pred EecC-----CCCceeEEEEEEEHHHhhhcC-CcceeEEEeCCCC--------cEEEEEEEEEe
Confidence 6653 556789999999999999875 5668999999864 23666666665
|
| >d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]} | Back information, alignment and structure |
|---|
| >d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
| >d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|