Citrus Sinensis ID: 002913
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 866 | ||||||
| 255583344 | 1094 | Exocyst complex component, putative [Ric | 0.922 | 0.730 | 0.760 | 0.0 | |
| 296081171 | 1096 | unnamed protein product [Vitis vinifera] | 0.922 | 0.729 | 0.740 | 0.0 | |
| 359493109 | 1095 | PREDICTED: LOW QUALITY PROTEIN: exocyst | 0.922 | 0.729 | 0.740 | 0.0 | |
| 224066701 | 1101 | predicted protein [Populus trichocarpa] | 0.927 | 0.729 | 0.778 | 0.0 | |
| 449443834 | 1089 | PREDICTED: exocyst complex component 2-l | 0.923 | 0.734 | 0.704 | 0.0 | |
| 356535713 | 1085 | PREDICTED: exocyst complex component 2-l | 0.924 | 0.738 | 0.693 | 0.0 | |
| 356576143 | 1087 | PREDICTED: exocyst complex component 2-l | 0.924 | 0.736 | 0.698 | 0.0 | |
| 297839553 | 1089 | hypothetical protein ARALYDRAFT_476843 [ | 0.915 | 0.728 | 0.674 | 0.0 | |
| 22330675 | 1090 | exocyst complex component 2 [Arabidopsis | 0.912 | 0.724 | 0.669 | 0.0 | |
| 297845096 | 1085 | hypothetical protein ARALYDRAFT_889573 [ | 0.916 | 0.731 | 0.675 | 0.0 |
| >gi|255583344|ref|XP_002532433.1| Exocyst complex component, putative [Ricinus communis] gi|223527853|gb|EEF29948.1| Exocyst complex component, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/834 (76%), Positives = 710/834 (85%), Gaps = 35/834 (4%)
Query: 1 MSSDSD-EDELLQMALKEQAQRRVVYDTP---QPRKPVTNYVQQ---------------- 40
MSSDSD EDELLQMALKEQAQR + Y P RKPV N+VQ
Sbjct: 1 MSSDSDDEDELLQMALKEQAQRDLNYQKPPSSSQRKPVVNFVQPPKTTAAAAAAAAPKKG 60
Query: 41 PKSAATQKGGRSQGKKYEEEEESEVEMLSISSGDEEVSRDRGLAAKNRARGRR------- 93
A QK R E++++SE+EMLSISSGDEEV++DRG
Sbjct: 61 TSPAQNQKNRRV----VEDDDDSELEMLSISSGDEEVTKDRGGGGGGAKGRVAGGGGGRG 116
Query: 94 --DDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQ 151
+DD WDG+EP+CWKRVDEAELARRVREMRETRTAPVAQKYE+KPS A G KG + LQ
Sbjct: 117 GKEDDRGWDGEEPDCWKRVDEAELARRVREMRETRTAPVAQKYERKPS-AIGRKGLNNLQ 175
Query: 152 SFPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLF 211
SFPRGMECIDPLGLGIIDN+TLRLIT+SS S+PKSD++++DN+LREKL+YFS+ F+AKLF
Sbjct: 176 SFPRGMECIDPLGLGIIDNRTLRLITESSDSSPKSDKESLDNNLREKLLYFSEKFDAKLF 235
Query: 212 LSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIE 271
LSR+HQ+TS+ADLE GALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIE
Sbjct: 236 LSRIHQDTSAADLEGGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIE 295
Query: 272 EDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIR 331
EDPEGSGT+HLF MQGVSS ANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIR
Sbjct: 296 EDPEGSGTSHLFNCMQGVSSLANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIR 355
Query: 332 GSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLT 391
GSISKGE+DLAVREYKKAKSIALPSHVNILKRVLEEVEKVM EFK LYKSMEDP IDLT
Sbjct: 356 GSISKGEYDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMHEFKGTLYKSMEDPQIDLT 415
Query: 392 NLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDA 451
NLENTVRLLLELEP+SDPVWHYL+VQNHRIRGL EKCTLDHEARMETLHN++ ERA+SDA
Sbjct: 416 NLENTVRLLLELEPDSDPVWHYLSVQNHRIRGLLEKCTLDHEARMETLHNQMRERAISDA 475
Query: 452 RWLQIQQDLNQSSGADYSVTCGNIQ-PIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIP 510
+W QIQQ+LNQSS +YS+ GNI P+DS P++L+GEEVD RG+YIRRLTAVLIHHIP
Sbjct: 476 KWRQIQQNLNQSSDVNYSLEMGNIPLPVDSQPIDLTGEEVDVLRGKYIRRLTAVLIHHIP 535
Query: 511 AFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISV 570
AFWKVALSVFSGKFAKSSQVSSESN+N S NK EEKVG+G+YS HSLDEVAGMIR+TIS
Sbjct: 536 AFWKVALSVFSGKFAKSSQVSSESNVNTSSNKTEEKVGDGRYSTHSLDEVAGMIRSTISA 595
Query: 571 YEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKI 630
YE+KVHNTF DLE+SNIL+SYM DAI++I++ACQAFEAKESAPP AVM LR LQAEITKI
Sbjct: 596 YEVKVHNTFRDLEESNILQSYMSDAIKDIARACQAFEAKESAPPTAVMALRALQAEITKI 655
Query: 631 YIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIH 690
YI RLCSWM+ +T+ ISK+ETW+PVSILERNKSPYTIS LPLAFRS++ S+MDQISLMI
Sbjct: 656 YILRLCSWMRATTEEISKEETWLPVSILERNKSPYTISILPLAFRSVIASAMDQISLMIQ 715
Query: 691 SLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNG 750
SLRSEA KSEDM+AQL +IQESVRL+FLN FLDFAGHLE I SELAQNKS+KE+ HLQNG
Sbjct: 716 SLRSEARKSEDMFAQLQDIQESVRLAFLNCFLDFAGHLEQIGSELAQNKSSKETPHLQNG 775
Query: 751 YSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSR 804
Y+ D SD+ G+VVD H++LLIV+SNIGYCKDELS ELYNKY++ W QSR
Sbjct: 776 YAYDSEENPPSDLSGNVVDSHKKLLIVLSNIGYCKDELSYELYNKYRNTWQQSR 829
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296081171|emb|CBI18197.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359493109|ref|XP_002269025.2| PREDICTED: LOW QUALITY PROTEIN: exocyst complex component 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224066701|ref|XP_002302182.1| predicted protein [Populus trichocarpa] gi|222843908|gb|EEE81455.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449443834|ref|XP_004139681.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] gi|449503239|ref|XP_004161903.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356535713|ref|XP_003536388.1| PREDICTED: exocyst complex component 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356576143|ref|XP_003556193.1| PREDICTED: exocyst complex component 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297839553|ref|XP_002887658.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] gi|297333499|gb|EFH63917.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|22330675|ref|NP_177811.2| exocyst complex component 2 [Arabidopsis thaliana] gi|24638217|sp|Q8S3U9.1|EXOC2_ARATH RecName: Full=Exocyst complex component 2; AltName: Full=Exocyst complex component Sec5 gi|19387170|gb|AAL87121.1|AF479278_1 SEC5a [Arabidopsis thaliana] gi|26452107|dbj|BAC43143.1| unknown protein [Arabidopsis thaliana] gi|29029068|gb|AAO64913.1| At1g76850 [Arabidopsis thaliana] gi|332197774|gb|AEE35895.1| exocyst complex component 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297845096|ref|XP_002890429.1| hypothetical protein ARALYDRAFT_889573 [Arabidopsis lyrata subsp. lyrata] gi|297336271|gb|EFH66688.1| hypothetical protein ARALYDRAFT_889573 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 866 | ||||||
| TAIR|locus:2030056 | 1090 | SEC5A "AT1G76850" [Arabidopsis | 0.911 | 0.723 | 0.642 | 6.5e-279 | |
| TAIR|locus:2199552 | 1090 | SEC5B "AT1G21170" [Arabidopsis | 0.832 | 0.661 | 0.688 | 7.4e-275 | |
| DICTYBASE|DDB_G0280081 | 1095 | exoc2 "exocyst complex subunit | 0.264 | 0.209 | 0.284 | 5.1e-27 | |
| UNIPROTKB|F1P2A7 | 925 | EXOC2 "Uncharacterized protein | 0.587 | 0.550 | 0.227 | 1.1e-25 | |
| RGD|619961 | 924 | Exoc2 "exocyst complex compone | 0.398 | 0.373 | 0.257 | 3.5e-25 | |
| UNIPROTKB|O54921 | 924 | Exoc2 "Exocyst complex compone | 0.398 | 0.373 | 0.257 | 3.5e-25 | |
| MGI|MGI:1913732 | 924 | Exoc2 "exocyst complex compone | 0.398 | 0.373 | 0.257 | 4.5e-25 | |
| UNIPROTKB|Q96KP1 | 924 | EXOC2 "Exocyst complex compone | 0.497 | 0.466 | 0.246 | 4.6e-25 | |
| UNIPROTKB|E1BDW9 | 924 | EXOC2 "Uncharacterized protein | 0.384 | 0.360 | 0.257 | 1.3e-23 | |
| UNIPROTKB|E2RCW3 | 924 | EXOC2 "Uncharacterized protein | 0.502 | 0.470 | 0.241 | 2.1e-23 |
| TAIR|locus:2030056 SEC5A "AT1G76850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2553 (903.8 bits), Expect = 6.5e-279, Sum P(3) = 6.5e-279
Identities = 527/820 (64%), Positives = 620/820 (75%)
Query: 1 MSSDSDEDELLQMALKEQAQRRVVYDTPQPR--KPVTNYVQQPK--SAATQKGGRSQGKK 56
+ + D Q A++ V QPR KPV PK +AA +K + ++
Sbjct: 18 LKEQAKRDLTYQKPPSSSARKPVANLVQQPRQQKPVAAAAAPPKKSAAAVRKPSMDEDEE 77
Query: 57 YXXXXXXXXXXXXXXXGDEEVS-------RDRGLAAKNRAXXXXXXXXXXXXXEPNCWKR 109
+ E+ R RG + + EP+CWKR
Sbjct: 78 SEVELLSISSGDDDLEREREIGGSSGGAGRGRGSDVREKGRARKEDDGAWDGGEPDCWKR 137
Query: 110 VDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIK-GFSTLQSFPRGMECIDPLGLGII 168
V+EAELARRVR+MRE+RTAPV QK E K + A G K ++LQS PRGMECIDPL LGII
Sbjct: 138 VNEAELARRVRDMRESRTAPVVQKVEGK-APAPGKKVALTSLQSLPRGMECIDPLKLGII 196
Query: 169 DNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGA 228
DNKTLRLIT+SSGS K+++ VDN+LREKL+YFSD F+ KLFLSR+HQ+T++ADLEAGA
Sbjct: 197 DNKTLRLITESSGSPSKAEK--VDNTLREKLVYFSDHFDPKLFLSRIHQDTTAADLEAGA 254
Query: 229 LALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQG 288
L LK+DLKGR QRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGT HLF M+
Sbjct: 255 LGLKSDLKGRNLQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTTHLFNCMKS 314
Query: 289 VSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKK 348
V+S+AN AFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPS IR SISKGE+DLAVREYKK
Sbjct: 315 VTSRANLAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSIIRSSISKGEYDLAVREYKK 374
Query: 349 AKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESD 408
AKSIALPSHVNILKRVLEEVEKVM EFK LYKSMEDP ID T+LENTVRLLLELEPESD
Sbjct: 375 AKSIALPSHVNILKRVLEEVEKVMLEFKGTLYKSMEDPKIDFTSLENTVRLLLELEPESD 434
Query: 409 PVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADY 468
PVWHYLNVQNHRI GL EKCT DHEAR+E L N+ HE+A+SDA+W QIQQ+ G Y
Sbjct: 435 PVWHYLNVQNHRIHGLLEKCTYDHEARVEILRNDTHEKAISDAKWQQIQQN-----GVSY 489
Query: 469 SVTCG----NIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKF 524
S T N +D VE EE+D +GRYI+RLTAVL+HHIP FWK A+S+FSGKF
Sbjct: 490 SDTASSNENNAVQVDLQSVEFPSEEIDILKGRYIKRLTAVLVHHIPVFWKTAISIFSGKF 549
Query: 525 AKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLED 584
AKSSQV+ + S NKAEEKV E +YS HSL+EVAGMIR TISVYE KV++TF D ++
Sbjct: 550 AKSSQVT-----DTSANKAEEKVTEARYSTHSLEEVAGMIRKTISVYEAKVNSTFCDFDE 604
Query: 585 SNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTD 644
S ILR +M DAI E+SKACQAFEAKES P AV+ LR +QAEITKIYI RLCSWM+ ST+
Sbjct: 605 SCILRPFMSDAINEVSKACQAFEAKESTPHSAVVALRKIQAEITKIYIQRLCSWMRASTE 664
Query: 645 GISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYA 704
GISK+ETWIPVSILERN+SPY ISYLPLAFRS++ S M+Q++LMI S++SEA KSEDM+A
Sbjct: 665 GISKEETWIPVSILERNRSPYAISYLPLAFRSVIVSGMEQVNLMILSVKSEAAKSEDMFA 724
Query: 705 QLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIP 764
Q+ EI SVRL+FLN FLDFA HLE I ++L+Q+ S +++ +NGYS + E ++
Sbjct: 725 QIEEIIISVRLAFLNCFLDFAAHLEQIGADLSQSTSRQDNW--KNGYSDEHQEEPSANTY 782
Query: 765 GSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSR 804
GSV+DPH+RLL+V+SNIGYCKDEL+SELYNK+K WLQSR
Sbjct: 783 GSVIDPHRRLLMVLSNIGYCKDELASELYNKFKYTWLQSR 822
|
|
| TAIR|locus:2199552 SEC5B "AT1G21170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0280081 exoc2 "exocyst complex subunit 2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P2A7 EXOC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| RGD|619961 Exoc2 "exocyst complex component 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O54921 Exoc2 "Exocyst complex component 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:1913732 Exoc2 "exocyst complex component 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96KP1 EXOC2 "Exocyst complex component 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BDW9 EXOC2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RCW3 EXOC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 866 | |||
| KOG2347 | 934 | consensus Sec5 subunit of exocyst complex [Intrace | 100.0 | |
| PF15469 | 182 | Sec5: Exocyst complex component Sec5 | 100.0 | |
| KOG2346 | 636 | consensus Uncharacterized conserved protein [Funct | 99.96 | |
| PF04124 | 338 | Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 | 99.62 | |
| KOG2069 | 581 | consensus Golgi transport complex subunit [Intrace | 99.17 | |
| PF08700 | 87 | Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te | 98.89 | |
| PF10475 | 291 | DUF2450: Protein of unknown function N-terminal do | 98.26 | |
| PF04100 | 383 | Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 | 97.91 | |
| KOG2033 | 863 | consensus Low density lipoprotein B-like protein [ | 97.65 | |
| PF06248 | 593 | Zw10: Centromere/kinetochore Zw10; InterPro: IPR00 | 97.56 | |
| PF10392 | 132 | COG5: Golgi transport complex subunit 5; InterPro: | 97.31 | |
| PF06148 | 133 | COG2: COG (conserved oligomeric Golgi) complex com | 96.84 | |
| PF04048 | 142 | Sec8_exocyst: Sec8 exocyst complex component speci | 96.11 | |
| KOG3691 | 982 | consensus Exocyst complex subunit Sec8 [Intracellu | 95.88 | |
| KOG2180 | 793 | consensus Late Golgi protein sorting complex, subu | 95.15 | |
| KOG2307 | 705 | consensus Low density lipoprotein receptor [Intrac | 94.38 | |
| PF10191 | 766 | COG7: Golgi complex component 7 (COG7); InterPro: | 93.54 | |
| KOG2347 | 934 | consensus Sec5 subunit of exocyst complex [Intrace | 88.08 | |
| KOG2176 | 800 | consensus Exocyst complex, subunit SEC15 [Intracel | 82.0 |
| >KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-101 Score=886.28 Aligned_cols=761 Identities=40% Similarity=0.574 Sum_probs=621.2
Q ss_pred CCCCCcccccCCCCCcccCCCC-------CCCCCCCcccccceeeeecccCCcccccch---------hhhh-hcccCCc
Q 002913 30 PRKPVTNYVQQPKSAATQKGGR-------SQGKKYEEEEESEVEMLSISSGDEEVSRDR---------GLAA-KNRARGR 92 (866)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~ 92 (866)
.++||.+.+|||+++...++.. -+++.+. +|+|||++|+|+++||+..+.+ ++++ +.+|+++
T Consensus 2 ~~np~~~~~q~p~vtg~s~~e~~p~t~~~ir~e~l~-~~~sd~~~l~i~g~D~lls~~~~s~~~~~~~~g~a~~~~G~~r 80 (934)
T KOG2347|consen 2 TRNPVARLAQQPRVTGLSPNEGGPGTAVTIRKEFLG-NDESDVIGLSICGGDELLSAERKSPNGIIARVGLAKREKGDIR 80 (934)
T ss_pred CCCchhhccCCccccCCCCCCCCCCcceeecCCccC-cchhhHhhhhhcccchhhhhhcCCCCccccccccccCCCCceE
Confidence 4789999999998885433333 3346666 9999999999999999876664 2223 3388888
Q ss_pred cCCCCCCCCCCCCccccccHHHHHHHHHHHhhhcCcccccccccccchhhcc-cccccccccCCCCCCCCCCCCCc-cch
Q 002913 93 RDDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGI-KGFSTLQSFPRGMECIDPLGLGI-IDN 170 (866)
Q Consensus 93 ~~~~~~~~~~~p~~w~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~DPLGl~~-~~~ 170 (866)
..++..|+|-.|.+|.+|+.+++. +++|+..+++| +.++.++. .+.+ ++...+|..|+++...+|+-..+ ++
T Consensus 81 ~~~~~~~~g~s~~~f~r~~~~qi~--~l~~s~~~~d~--~~~~~~~~-~~~~~~~~t~l~~~~~l~~~i~~~k~~~~~d- 154 (934)
T KOG2347|consen 81 VTTLSGGKGTSTVCFRRVNHEQIG--PLDESAVRVDE--QQDQRKVP-GRLKGVALTSLQSEPPLGECIEPLKLKINED- 154 (934)
T ss_pred EeeccCccccCchhhhhhhHhhhc--cchhhhhhccc--cccccccc-ccccccCCcccccCCCcccccCchhhcchhh-
Confidence 999999999999999999999998 99999999888 66665544 3322 37777777776666666665543 33
Q ss_pred hhhhhhccCCCCCCCCCcCCCCcccccccCCCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHhhh
Q 002913 171 KTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNF 250 (866)
Q Consensus 171 ~~L~~i~~~~~~~P~~~~~~~~p~lr~~~disS~~FdP~~FLs~vH~~tS~edL~~gl~~L~reI~~~se~LK~LV~eNF 250 (866)
+..++|.. .+|+.+++|+|+|||.++|.++||+||+.|...|++..+..++.-+.||++||
T Consensus 155 -----------------~~~lfp~~--~~Dl~se~Fspkw~L~enH~~ts~edLk~~i~~lK~~~n~~~~~~~~lvK~n~ 215 (934)
T KOG2347|consen 155 -----------------NKTLFPIT--SVDLRSEHFSPKWFLLENHQDTSFEDLKAGILNLKRDLNGRKEGSLQLVKDNF 215 (934)
T ss_pred -----------------hhhhcccc--ccccccccCChhHHHHhhhhhccHHHHHHHHHHHHHhhcchhhhhHHHHhcch
Confidence 33456665 57899999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHHHHHHHHhhhhcCCCCCCCchhHHhhHHHHHHHHHhhhhhHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHH
Q 002913 251 DCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTI 330 (866)
Q Consensus 251 ~kFIsAKdTID~m~~e~k~~e~~~~~~~t~~L~~~L~~i~~~a~~I~~pLlerr~KaekLr~vl~~L~R~kfLFeLPs~L 330 (866)
+.||.|++|+++|+.++++.+.+..+++|.+|.+.|+++.+.|+.+|.+|++|+++||++|+++++|+||+||||||+++
T Consensus 216 ~~fi~~~dtl~~i~~kLe~~e~~~~gs~t~~l~n~i~~~~s~ad~iF~~vl~Rk~~ADstRsvL~~lqRfkfLFnLp~~i 295 (934)
T KOG2347|consen 216 DSFISCKDTLDNIHQKLERGEEDPHGSGTTKLENCIKNSTSRADLIFEDVLERKDKADSTRSVLGVLQRFKFLFNLPSNI 295 (934)
T ss_pred hHHHHHHHHHHHHHHHHhccccCccchHHHHHHHHHHHhhhHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcchhh
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCChHHHHHHHHHhhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHhcCCCCCChH
Q 002913 331 RGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPV 410 (866)
Q Consensus 331 ~~~Ik~gdYe~aV~dY~kAk~L~~~~~v~vfkkV~~EVE~ii~~~k~~L~~rL~~~~~s~ee~~~lI~lLleL~~~~dPi 410 (866)
+++|++|+|+.+|++|+|||+++.+++|++|+++++|||..|+.||..|+++|.+++.+.++++++|++|.+|++++||+
T Consensus 296 er~i~kGeYd~vvndYekAKsl~~~t~v~~Fkk~l~Eve~~m~~~k~~l~~kli~~p~t~~dq~~~ir~L~~L~~~~dP~ 375 (934)
T KOG2347|consen 296 ERSIKKGEYDTVVNDYEKAKSLFGKTEVNLFKKVLEEVEKRMQSFKETLYRKLIDTPITFEDQSKLIRYLSELEPESDPV 375 (934)
T ss_pred hhHhhcCCceeeccchhhHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhCcccCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhccCcccccccccCCCCCCCCCCCCCChhhH
Q 002913 411 WHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEV 490 (866)
Q Consensus 411 w~fL~sq~~~I~~~le~~~~e~~~k~e~l~~rl~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev 490 (866)
|.||..|++||...++.|...|+++++.++ + ++ +|.+.+.++...+.-+..++.+.-+. ....+..+.
T Consensus 376 wq~I~~q~k~i~~L~~s~~~~~~~~l~~~~--~-----~~-~~~q~s~~g~~~S~t~s~~~~~~~q~----~~~~~~~~k 443 (934)
T KOG2347|consen 376 WQCIGVQNKRILGLLESCWDDHVARLEGLR--L-----SD-KWTQPSQNGVHLSDTASSMENSQNQV----INEWKIREK 443 (934)
T ss_pred hhhccccchHHHhhhhhcchhHHHHhhccc--c-----cc-cccchhhcccccCchHHHHhhhhhhh----ccchhhhhh
Confidence 999999999999999999999999999986 1 22 55554544432221112222221110 112223334
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHhHhhcc-eeccccCCCcccccCccCcchhhh--cccCcccccchHHHHHHHHHH
Q 002913 491 DAFRGRYIRRLTAVLIHHIPAFWKVALSVFSG-KFAKSSQVSSESNLNASGNKAEEK--VGEGKYSIHSLDEVAGMIRNT 567 (866)
Q Consensus 491 ~~l~~~fv~~L~~~ll~~lp~FWkl~qs~~~G-~~~k~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~~~~k~Mi~~i 567 (866)
...++.||++||+++++++|+|||+|++||+| .|....+.+ .+..+|.+.. +....+..|++..+..|.+-+
T Consensus 444 ~~~r~~fiekL~~l~~s~lP~fWKl~~sy~~G~~~~~~sq~~-----~s~~~k~~qn~~~~~~~~v~~sLv~~~~~~~~t 518 (934)
T KOG2347|consen 444 TPERVNFIEKLTDLLLSQLPIFWKLAISYFNGDLFSPSSQVQ-----DSDINKMEQNNEVREKREVFHSLVELALMDRFT 518 (934)
T ss_pred chHHHHHHHHHHHHHHHhCcHHHHHHHHHhcccccCcccccC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 44578999999999999999999999999999 444444343 1344444444 444556666677776776666
Q ss_pred HHHHHHHHHhhccCcccchhhhHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 002913 568 ISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGIS 647 (866)
Q Consensus 568 i~~y~~~v~~afl~l~~~~~~~~~L~~~l~~i~~~~~~L~~l~~~P~~al~~L~~L~~~~~~~~v~~l~~~~~~~ae~i~ 647 (866)
++.|.-....-|.+.+...+..+||+++++++|.+|++|++++.+|+++++.|++|+.+ .|++|+|.+|++++|+|+
T Consensus 519 ~s~~~~~a~~~~~~~dis~~~~~~~~~~i~~vr~~~~sL~ale~~P~~~lq~Iq~li~~---~rl~~~~~~~~~~~e~is 595 (934)
T KOG2347|consen 519 LSQSDGKAKSPFGDADISRSLLPWMPLAIKTVRKACQSLEALESLPHDALQPIQKLITE---ARLQCLSSWMRASTERIS 595 (934)
T ss_pred hhhhcccccCCcCCcccccccCccchhHHHHhHHHHHHHHHhhhChHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 66666666655544444334559999999999999999999988999999999999999 999999999999999999
Q ss_pred ---cCCCcccccccccCCCCCccccchHHHHHHHHHHHHHHHHHHhhcccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q 002913 648 ---KDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDF 724 (866)
Q Consensus 648 ---~~EdW~~~~~~~r~~~~~~iT~LP~~Fe~~v~~~~~~l~~~l~~~~~E~~~~e~~~~~~~~~q~~v~~~f~~~l~~F 724 (866)
+.|+|++++++||+ .|+|+||+.||.+|+++|++++.++.+.++|+. +|+ ++++++.|+..+++..++|
T Consensus 596 ~l~~re~W~~~s~~~rn---~s~t~LP~~fEt~ivssl~q~~~~~l~~~gEa~----~f~-~~~~~~~i~el~I~~~~~f 667 (934)
T KOG2347|consen 596 TLAKRETWIPDSILERN---RSITYLPLAFETVIVSSLEQVNSVLLSFEGEAA----LFE-QPDMQAEIEELSISVRLAF 667 (934)
T ss_pred HHHhhhccccchhhhcc---cchhhhhHHHHHHHhhhHHhhhhHHhhcccccc----ccC-chHHHHHHHHHHHHHHHHH
Confidence 69999999999999 569999999999999999999999889899998 888 5999999999999999999
Q ss_pred HHHHHHHhhhhhhccccccccc-----ccCCCCCCCCCCccCCCCCCCCCCCcEEeeeeechhhHHhhhhHHHHHHHHhc
Q 002913 725 AGHLEHIASELAQNKSNKESQH-----LQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDI 799 (866)
Q Consensus 725 ~~~Le~la~~~~~~~~~~~s~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~RLLivLSN~~y~~~~~~p~l~~~f~~~ 799 (866)
+-|+++||.+..+-+ .+.++. .|++++...++.+....++.+++||+||||||||++||+...+|+|++.|++-
T Consensus 668 l~c~e~L~~h~~~~~-~~~~q~~t~~~~~~~~~~~~qed~~~ns~~~~~~~~qrlLi~LsN~~yc~~~~~~~l~n~fk~~ 746 (934)
T KOG2347|consen 668 LNCFEDLAIHLEQIG-ADLSQLTTQIEGQNGFSNAHQEDISINSADSVVDPEQRLLIVLSNIGYCKDILAPTLLNIFKYT 746 (934)
T ss_pred HHHHHHhhhcccccC-CchhhcccccccccccccccchhhhcccccccCChhheeEEEeccHHHHHHHHHHHHHHHHHHH
Confidence 999999999644332 222221 13344444445555556688999999999999999999999999999999999
Q ss_pred ccccchhhhcccccc------hhhhhheeeeeeeecCCccCcccccccCc--ceeEEEecCCC
Q 002913 800 WLQSRYFLNFCSSSL------ICWKYLYCIRVCTVHGSCGSQCFGHIHPK--YHLVYWTYGRP 854 (866)
Q Consensus 800 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 854 (866)
|-.++.-++..+-++ +-=+|+. -|+----|-+-|+ .|-.-|.|--|
T Consensus 747 ~~~~~k~iE~is~s~s~l~s~l~e~Yi~---------~k~~~i~~alEp~~~~~~~~W~~~~~ 800 (934)
T KOG2347|consen 747 WLLSRKNIEDISMSLSGLGSKLFENYIE---------DKADPIRGALEPYLLDGGIQWGMAPP 800 (934)
T ss_pred hhcccccHHHHHHHHHHHHHHHHHHHHH---------HhhhhhhhcccchhhccccccccCCC
Confidence 999999999887222 2233432 2444445667776 45555655444
|
|
| >PF15469 Sec5: Exocyst complex component Sec5 | Back alignment and domain information |
|---|
| >KOG2346 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [] | Back alignment and domain information |
|---|
| >KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi | Back alignment and domain information |
|---|
| >PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known | Back alignment and domain information |
|---|
| >PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] | Back alignment and domain information |
|---|
| >KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells | Back alignment and domain information |
|---|
| >PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking | Back alignment and domain information |
|---|
| >PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex | Back alignment and domain information |
|---|
| >PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis [] | Back alignment and domain information |
|---|
| >KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 866 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-17 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 84.9 bits (209), Expect = 6e-17
Identities = 85/620 (13%), Positives = 184/620 (29%), Gaps = 186/620 (30%)
Query: 3 SDSDEDELLQMALKEQAQRRVVYDTPQPRKPVTNYVQQPKSAATQKGGRSQGKKYEEEEE 62
S + D ++ R ++ T + + + + Y+
Sbjct: 47 SKEEIDHIIMSKDAVSGTLR-LFWT---------LLSKQEEMVQKFVEEVLRINYK---- 92
Query: 63 SEVEMLSISSGDEEVSRDRGLAAKNRARGRRDDDGTWDGDEPNCWKRVDEAELARRVREM 122
+ S + R + + R D ++ ++ V R++
Sbjct: 93 ------FLMSPIKTEQRQPSMMTRMYIEQR---DRLYNDNQVFAKYNV------SRLQPY 137
Query: 123 RETRTAPVAQKYEKKPSMAA-GIKGF--STL-----------QSFPRGM------ECIDP 162
+ R A + ++ G+ G + + + C P
Sbjct: 138 LKLRQA--LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP 195
Query: 163 LGLGIIDNKTLRLIT---DSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNT 219
+ + K L I S + + + +S++ +L +L S+ ++N
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI-HSIQAEL--------RRLLKSKPYEN- 245
Query: 220 SSADLEAGALALKTDLKGRTQQRKQLVKDN---------FDCFVSCK---TT-----IDD 262
L LV N F+ +SCK TT D
Sbjct: 246 --------CL---------------LVLLNVQNAKAWNAFN--LSCKILLTTRFKQVTDF 280
Query: 263 I-ESKLKRIEEDPEGSG-----TAHLFKLMQGVSSQANRAFEPLFERQAQ---------- 306
+ + I D L Q P R+
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD----LP---REVLTTNPRRLSII 333
Query: 307 AEKIRSVQGMLQRFRTLFN--LPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRV 364
AE IR ++ + L + I S++ E R+ S+ P +I +
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE-YRKMFDRLSV-FPPSAHIPTIL 391
Query: 365 L---------EEVEKVMQEF--KAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHY 413
L +V V+ + +++ K ++ I + ++ L L+++ E++ H
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY----LELKVKLENEYALHR 447
Query: 414 LNVQNHRIRGLFE-----KCTLD---------HEARMETLHN-ELHERAMSDARWLQIQQ 458
V ++ I F+ LD H +E L D R+ ++Q
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF--LEQ 505
Query: 459 DLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIR-------RLTAVLIHHIPA 511
+ S A + +++L +++ ++ YI RL ++ +P
Sbjct: 506 KIRHDSTA----WNASGSILNTL------QQLKFYK-PYICDNDPKYERLVNAILDFLP- 553
Query: 512 FWKVALSVFSGKFAKSSQVS 531
K+ ++ K+ +++
Sbjct: 554 --KIEENLICSKYTDLLRIA 571
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 866 | |||
| 2d2s_A | 235 | Exocyst complex component EXO84; tethering complex | 94.62 |
| >2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2 | Back alignment and structure |
|---|
Probab=94.62 E-value=0.11 Score=54.36 Aligned_cols=197 Identities=14% Similarity=0.166 Sum_probs=134.0
Q ss_pred HHHHHHhcCcHHHHHhhhcCChHHHHHHHHHhhhhccC-------cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCh
Q 002913 318 QRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALP-------SHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDL 390 (866)
Q Consensus 318 ~R~kfLFeLPs~L~~~Ik~gdYe~aV~dY~kAk~L~~~-------~~v~vfkkV~~EVE~ii~~~k~~L~~rL~~~~~s~ 390 (866)
+..+.+-++|..|.-+|...+|++||.--.+++.++.. .+.....-+-.-|++....+...|-+.|.. +...
T Consensus 13 ~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~-~~~~ 91 (235)
T 2d2s_A 13 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS-SNEI 91 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT-CSSH
T ss_pred hhHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCH
Confidence 44677888899999999999999999999999987642 223445556667778888888888888855 6678
Q ss_pred hHHHHHHHHHhcCCCCCChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhccCccccccc
Q 002913 391 TNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSV 470 (866)
Q Consensus 391 ee~~~lI~lLleL~~~~dPiw~fL~sq~~~I~~~le~~~~e~~~k~e~l~~rl~~~~~s~~~~~~l~~~~~~~~~~~~~~ 470 (866)
.+..+.|.+|.+||-.+.-.-.||.++..+|+..+..+ .. .
T Consensus 92 ~~~r~~v~~L~rLg~~~~A~~lfL~~rs~~i~~~~r~l--~~--------------------------------~----- 132 (235)
T 2d2s_A 92 VHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQI--GS--------------------------------V----- 132 (235)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC------------------------------------C-----
T ss_pred HHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHh--cc--------------------------------c-----
Confidence 89999999999999888888889988887777666322 00 0
Q ss_pred ccCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHhhhhHHHHHHhHhhcceeccccCCCcccccCccCcchhhhcccC
Q 002913 471 TCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEG 550 (866)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~ev~~l~~~fv~~L~~~ll~~lp~FWkl~qs~~~G~~~k~~~~~~~~~~~~~~~k~~~~~~~~ 550 (866)
+ + ...|+..|+.+.-+.|-+ +++-|.. -| +.. + +.
T Consensus 133 g-------d--------------~~~Yi~~Ls~i~Fs~I~~---t~~~f~~-~F-~~~--~------~~----------- 167 (235)
T 2d2s_A 133 D-------N--------------PTNYLTQLAVIRFQTIKK---TVEDFQD-IF-KEL--G------AK----------- 167 (235)
T ss_dssp C-------S--------------HHHHHHHHHHHHHHHHHH---HHHHHHH-HS-TTC--C------HH-----------
T ss_pred C-------C--------------HHHHHHHHHHHHHHHHHH---HHHHHHH-Hh-CCC--C------cc-----------
Confidence 0 0 346788888773333321 2222221 11 100 0 00
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHhhccCcccchhhhHHHHHHHHHHHHHHHHHhhcc
Q 002913 551 KYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKE 610 (866)
Q Consensus 551 ~~~~~~~~~~k~Mi~~ii~~y~~~v~~afl~l~~~~~~~~~L~~~l~~i~~~~~~L~~l~ 610 (866)
-...+..++.+-+..|.++++-=+.. +. .... +|+..++.-|..|...+
T Consensus 168 -----~~S~lV~Wa~~eve~f~~l~~rqv~~--~~-~l~~---ecv~i~~~~~~~L~~vG 216 (235)
T 2d2s_A 168 -----ISSILVDWCSDEVDNHFKLIDKQLLN--DE-MLSP---GSIKSSRKQIDGLKAVG 216 (235)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHTTC------CCH---HHHHHHHHHHHGGGGGT
T ss_pred -----cccHHHHHHHHHHHHHHHHHHHHccC--Cc-cHHH---HHHHHHHHHHHHHHHcC
Confidence 12267789999999999888665533 22 2333 99999999999988773
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 866 | |||
| d2d2sa1 | 229 | Exocyst complex component EXO84 {Baker's yeast (Sa | 96.77 |
| >d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Cullin repeat-like family: Exocyst complex component domain: Exocyst complex component EXO84 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.77 E-value=0.0023 Score=63.96 Aligned_cols=109 Identities=16% Similarity=0.176 Sum_probs=88.8
Q ss_pred HHHHHHHhcCcHHHHHhhhcCChHHHHHHHHHhhhhccC-------cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 002913 317 LQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALP-------SHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHID 389 (866)
Q Consensus 317 L~R~kfLFeLPs~L~~~Ik~gdYe~aV~dY~kAk~L~~~-------~~v~vfkkV~~EVE~ii~~~k~~L~~rL~~~~~s 389 (866)
-++.+.+-++|..|.-+|.+++|++|+.-..+++.+... ........+-..|++..+.+...|-..+... .+
T Consensus 6 ~~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l~~~-~~ 84 (229)
T d2d2sa1 6 AQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILSS-NE 84 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHTC-SS
T ss_pred HhhhhhHhcccHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CC
Confidence 467899999999999999999999999998888775421 2344556677788888888888888888764 57
Q ss_pred hhHHHHHHHHHhcCCCCCChHHHHHHHhHHHHHHHHH
Q 002913 390 LTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFE 426 (866)
Q Consensus 390 ~ee~~~lI~lLleL~~~~dPiw~fL~sq~~~I~~~le 426 (866)
..++.+.|.+|..||..+.-.-.||.++..||...+.
T Consensus 85 ~~~~~~~v~~L~rLg~~~~A~~lfL~~rs~~l~~~i~ 121 (229)
T d2d2sa1 85 IVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLIL 121 (229)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999998777778899888888877663
|